Multiple sequence alignment - TraesCS5A01G095000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G095000 chr5A 100.000 6098 0 0 1 6098 132100603 132094506 0.000000e+00 11261.0
1 TraesCS5A01G095000 chr5A 94.386 285 16 0 4354 4638 644875871 644876155 7.260000e-119 438.0
2 TraesCS5A01G095000 chr5A 89.706 204 13 3 5892 6090 132969125 132969325 2.820000e-63 254.0
3 TraesCS5A01G095000 chr5A 91.209 91 5 1 1377 1467 132099141 132099054 2.990000e-23 121.0
4 TraesCS5A01G095000 chr5A 91.209 91 5 1 1463 1550 132099227 132099137 2.990000e-23 121.0
5 TraesCS5A01G095000 chr5B 93.743 2797 96 29 1463 4189 134132609 134129822 0.000000e+00 4122.0
6 TraesCS5A01G095000 chr5B 95.279 932 33 6 4639 5567 134129748 134128825 0.000000e+00 1467.0
7 TraesCS5A01G095000 chr5B 90.653 674 20 10 819 1467 134133174 134132519 0.000000e+00 856.0
8 TraesCS5A01G095000 chr5B 92.514 521 35 2 5579 6098 134128725 134128208 0.000000e+00 743.0
9 TraesCS5A01G095000 chr5B 91.339 254 15 5 3 253 134136113 134135864 2.110000e-89 340.0
10 TraesCS5A01G095000 chr5B 90.686 204 10 4 5892 6090 134540898 134541097 4.690000e-66 263.0
11 TraesCS5A01G095000 chr5B 90.071 141 13 1 4733 4873 369483931 369484070 1.350000e-41 182.0
12 TraesCS5A01G095000 chr5B 96.053 76 3 0 4278 4353 134129821 134129746 2.310000e-24 124.0
13 TraesCS5A01G095000 chr5D 94.511 1931 61 12 1463 3350 121085680 121083752 0.000000e+00 2937.0
14 TraesCS5A01G095000 chr5D 95.755 1013 26 8 3346 4353 121078660 121077660 0.000000e+00 1616.0
15 TraesCS5A01G095000 chr5D 91.198 1102 57 14 391 1467 121086679 121085593 0.000000e+00 1461.0
16 TraesCS5A01G095000 chr5D 95.291 722 26 4 4851 5567 121077290 121076572 0.000000e+00 1138.0
17 TraesCS5A01G095000 chr5D 93.592 515 27 3 5579 6090 121076522 121076011 0.000000e+00 763.0
18 TraesCS5A01G095000 chr5D 88.564 376 25 9 14 387 121087070 121086711 2.020000e-119 440.0
19 TraesCS5A01G095000 chr5D 94.787 211 11 0 4639 4849 121077662 121077452 4.560000e-86 329.0
20 TraesCS5A01G095000 chr5D 91.447 152 12 1 4722 4873 319252801 319252951 2.230000e-49 207.0
21 TraesCS5A01G095000 chr1A 89.577 614 51 9 4964 5567 78337975 78337365 0.000000e+00 767.0
22 TraesCS5A01G095000 chr1A 98.601 286 4 0 4353 4638 34247768 34248053 1.960000e-139 507.0
23 TraesCS5A01G095000 chr1A 96.897 290 8 1 4349 4638 50262176 50262464 9.190000e-133 484.0
24 TraesCS5A01G095000 chr1A 86.288 299 23 5 5764 6058 78337168 78336884 5.940000e-80 309.0
25 TraesCS5A01G095000 chr1D 89.550 555 42 9 5021 5567 84568780 84568234 0.000000e+00 689.0
26 TraesCS5A01G095000 chr1D 84.228 298 30 5 5764 6058 84567137 84566854 2.170000e-69 274.0
27 TraesCS5A01G095000 chr3A 97.938 291 5 1 4349 4638 519213896 519214186 2.540000e-138 503.0
28 TraesCS5A01G095000 chr2A 98.252 286 5 0 4353 4638 645911143 645910858 9.120000e-138 501.0
29 TraesCS5A01G095000 chr6A 97.213 287 8 0 4355 4641 248272646 248272360 2.560000e-133 486.0
30 TraesCS5A01G095000 chr6A 96.864 287 9 0 4352 4638 27519402 27519688 1.190000e-131 481.0
31 TraesCS5A01G095000 chr6A 89.677 155 13 3 4718 4872 73979057 73979208 1.730000e-45 195.0
32 TraesCS5A01G095000 chr4B 93.266 297 17 3 4350 4645 231680025 231679731 9.390000e-118 435.0
33 TraesCS5A01G095000 chrUn 92.929 297 18 3 4344 4638 82023016 82023311 4.370000e-116 429.0
34 TraesCS5A01G095000 chrUn 83.871 155 22 3 4718 4872 16392663 16392814 1.770000e-30 145.0
35 TraesCS5A01G095000 chr7A 94.737 152 7 1 4721 4872 105168559 105168409 1.020000e-57 235.0
36 TraesCS5A01G095000 chr3D 90.798 163 12 3 4711 4872 606485941 606486101 1.330000e-51 215.0
37 TraesCS5A01G095000 chr7D 88.550 131 13 2 4737 4867 10510555 10510683 2.280000e-34 158.0
38 TraesCS5A01G095000 chr2B 100.000 29 0 0 2296 2324 788093599 788093627 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G095000 chr5A 132094506 132100603 6097 True 3834.333333 11261 94.139333 1 6098 3 chr5A.!!$R1 6097
1 TraesCS5A01G095000 chr5B 134128208 134136113 7905 True 1275.333333 4122 93.263500 3 6098 6 chr5B.!!$R1 6095
2 TraesCS5A01G095000 chr5D 121083752 121087070 3318 True 1612.666667 2937 91.424333 14 3350 3 chr5D.!!$R2 3336
3 TraesCS5A01G095000 chr5D 121076011 121078660 2649 True 961.500000 1616 94.856250 3346 6090 4 chr5D.!!$R1 2744
4 TraesCS5A01G095000 chr1A 78336884 78337975 1091 True 538.000000 767 87.932500 4964 6058 2 chr1A.!!$R1 1094
5 TraesCS5A01G095000 chr1D 84566854 84568780 1926 True 481.500000 689 86.889000 5021 6058 2 chr1D.!!$R1 1037

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
863 3028 0.034960 GCCTCCACCTTCCTTCCTTC 60.035 60.000 0.00 0.00 0.00 3.46 F
1469 3685 0.034337 TGGAGACCAACTAACCACGC 59.966 55.000 0.00 0.00 0.00 5.34 F
1890 4162 0.112995 AAATCTTCAGGGTGCTGGCA 59.887 50.000 0.00 0.00 0.00 4.92 F
3498 5792 0.871722 GGTCATGTTACGCTGTTGCA 59.128 50.000 0.00 0.00 39.64 4.08 F
4200 6495 1.296392 TGCTAGTGCACGAGCCAAT 59.704 52.632 38.05 12.98 45.31 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1671 3910 0.267658 GGGGCCTTTATGGGGGATTT 59.732 55.000 0.84 0.0 36.00 2.17 R
3165 5445 1.376037 GTTCCAGCAGGAGAACGGG 60.376 63.158 0.00 0.0 46.74 5.28 R
3793 6088 1.895798 ACAGAAGCAACATCGGAGAGA 59.104 47.619 0.00 0.0 43.63 3.10 R
4352 6647 0.035056 CTCCAAACCGAATGAGCCCT 60.035 55.000 0.00 0.0 0.00 5.19 R
5518 7984 1.035139 AACACAGCAGGCTCAAAAGG 58.965 50.000 0.00 0.0 0.00 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 0.737715 GAGGTGCGTGCGAGAAAGAT 60.738 55.000 0.00 0.00 0.00 2.40
117 120 3.713858 TGACAAGTTGGCATCAAACAG 57.286 42.857 7.51 0.00 34.28 3.16
173 176 2.483014 TGCCTAACATAACGGTGCTT 57.517 45.000 0.00 0.00 0.00 3.91
190 193 3.037549 TGCTTTTCCACCACCTGAATTT 58.962 40.909 0.00 0.00 0.00 1.82
205 208 4.261741 CCTGAATTTCACTGTTCAACCCTG 60.262 45.833 0.00 0.00 34.26 4.45
207 210 2.136298 TTTCACTGTTCAACCCTGCA 57.864 45.000 0.00 0.00 0.00 4.41
208 211 1.388547 TTCACTGTTCAACCCTGCAC 58.611 50.000 0.00 0.00 0.00 4.57
245 248 0.170116 TTCGTGCGGATTTTGCATCC 59.830 50.000 0.00 0.00 45.34 3.51
280 2104 6.645700 GCTGAGCATAGCTTAGATGATTAC 57.354 41.667 14.03 0.00 43.59 1.89
281 2105 6.162079 GCTGAGCATAGCTTAGATGATTACA 58.838 40.000 14.03 0.00 43.59 2.41
335 2161 7.665559 TGTTTAGCTTCCATACTTGAGATGTTT 59.334 33.333 0.00 0.00 0.00 2.83
356 2182 1.403814 CATCGACCAAGAGGCTCCTA 58.596 55.000 11.71 0.00 39.06 2.94
372 2198 4.433615 GCTCCTATGATGACTTCGTCAAA 58.566 43.478 5.26 0.00 45.96 2.69
377 2203 9.265901 CTCCTATGATGACTTCGTCAAATTTAT 57.734 33.333 5.26 0.00 45.96 1.40
403 2257 3.036075 TGTGTCAGCTCAATGTCTCAG 57.964 47.619 0.00 0.00 0.00 3.35
435 2289 1.134367 GGAGTAGAGTGTGCATGCGTA 59.866 52.381 14.09 0.72 0.00 4.42
437 2291 1.544246 AGTAGAGTGTGCATGCGTACA 59.456 47.619 21.47 15.11 35.15 2.90
438 2292 2.029380 AGTAGAGTGTGCATGCGTACAA 60.029 45.455 21.47 7.88 39.61 2.41
439 2293 1.877637 AGAGTGTGCATGCGTACAAA 58.122 45.000 21.47 0.00 39.61 2.83
445 2300 3.845775 GTGTGCATGCGTACAAATAAGTG 59.154 43.478 14.09 0.00 39.61 3.16
449 2304 6.535508 TGTGCATGCGTACAAATAAGTGTATA 59.464 34.615 14.09 0.00 36.42 1.47
451 2306 8.705134 GTGCATGCGTACAAATAAGTGTATATA 58.295 33.333 14.09 0.00 36.42 0.86
452 2307 9.430623 TGCATGCGTACAAATAAGTGTATATAT 57.569 29.630 14.09 0.00 36.42 0.86
478 2333 8.264347 TGTGTATGTAACCATCTGTGATTGTAT 58.736 33.333 0.00 0.00 32.29 2.29
485 2340 6.258230 ACCATCTGTGATTGTATTGTGTTG 57.742 37.500 0.00 0.00 0.00 3.33
492 2347 8.291740 TCTGTGATTGTATTGTGTTGAAAGATG 58.708 33.333 0.00 0.00 0.00 2.90
500 2355 8.022550 TGTATTGTGTTGAAAGATGTGCATTAG 58.977 33.333 0.00 0.00 0.00 1.73
506 2361 7.809331 GTGTTGAAAGATGTGCATTAGAAATCA 59.191 33.333 0.00 0.00 0.00 2.57
516 2371 9.976511 ATGTGCATTAGAAATCATCCATTTTAG 57.023 29.630 0.00 0.00 34.60 1.85
534 2389 8.752766 CATTTTAGAAAATGTGAAGTCAGCAT 57.247 30.769 16.29 0.00 46.27 3.79
535 2390 9.199982 CATTTTAGAAAATGTGAAGTCAGCATT 57.800 29.630 16.29 4.36 46.27 3.56
597 2455 7.379529 CGAGTTTAAATGTGCTTTCTGTTCATT 59.620 33.333 0.00 0.00 0.00 2.57
607 2465 7.487829 TGTGCTTTCTGTTCATTGAGTTTTAAC 59.512 33.333 0.00 0.00 0.00 2.01
619 2477 7.915397 TCATTGAGTTTTAACTTGAACTTCTGC 59.085 33.333 0.00 0.00 39.88 4.26
683 2543 4.773013 TCTACCCGTTACATGGAAAATCC 58.227 43.478 0.00 0.00 36.96 3.01
694 2554 6.475596 ACATGGAAAATCCTGAAATCCATC 57.524 37.500 2.73 0.00 45.40 3.51
698 2558 4.586421 GGAAAATCCTGAAATCCATCTCCC 59.414 45.833 0.00 0.00 32.53 4.30
706 2566 5.163478 CCTGAAATCCATCTCCCACAATTTC 60.163 44.000 0.00 0.00 34.99 2.17
721 2581 5.205565 CACAATTTCTGAGATGATGATGCG 58.794 41.667 0.00 0.00 0.00 4.73
822 2983 5.614324 AAAACAAGAGGGAAGAAAAAGGG 57.386 39.130 0.00 0.00 0.00 3.95
863 3028 0.034960 GCCTCCACCTTCCTTCCTTC 60.035 60.000 0.00 0.00 0.00 3.46
864 3029 0.621082 CCTCCACCTTCCTTCCTTCC 59.379 60.000 0.00 0.00 0.00 3.46
865 3030 1.662686 CTCCACCTTCCTTCCTTCCT 58.337 55.000 0.00 0.00 0.00 3.36
866 3031 1.988846 CTCCACCTTCCTTCCTTCCTT 59.011 52.381 0.00 0.00 0.00 3.36
867 3032 1.985895 TCCACCTTCCTTCCTTCCTTC 59.014 52.381 0.00 0.00 0.00 3.46
868 3033 1.004862 CCACCTTCCTTCCTTCCTTCC 59.995 57.143 0.00 0.00 0.00 3.46
869 3034 1.004862 CACCTTCCTTCCTTCCTTCCC 59.995 57.143 0.00 0.00 0.00 3.97
870 3035 1.132036 ACCTTCCTTCCTTCCTTCCCT 60.132 52.381 0.00 0.00 0.00 4.20
1339 3555 1.560860 GATGCAAGATCGTAGCGCCC 61.561 60.000 2.29 0.00 0.00 6.13
1464 3680 3.695830 TCCATGTGGAGACCAACTAAC 57.304 47.619 0.00 0.00 39.78 2.34
1465 3681 2.304761 TCCATGTGGAGACCAACTAACC 59.695 50.000 0.00 0.00 39.78 2.85
1466 3682 2.039746 CCATGTGGAGACCAACTAACCA 59.960 50.000 0.00 0.00 34.18 3.67
1468 3684 1.792006 GTGGAGACCAACTAACCACG 58.208 55.000 0.00 0.00 40.82 4.94
1469 3685 0.034337 TGGAGACCAACTAACCACGC 59.966 55.000 0.00 0.00 0.00 5.34
1470 3686 0.672711 GGAGACCAACTAACCACGCC 60.673 60.000 0.00 0.00 0.00 5.68
1471 3687 0.034337 GAGACCAACTAACCACGCCA 59.966 55.000 0.00 0.00 0.00 5.69
1472 3688 0.250166 AGACCAACTAACCACGCCAC 60.250 55.000 0.00 0.00 0.00 5.01
1473 3689 1.562575 GACCAACTAACCACGCCACG 61.563 60.000 0.00 0.00 0.00 4.94
1474 3690 2.322081 CCAACTAACCACGCCACGG 61.322 63.158 0.00 0.00 0.00 4.94
1475 3691 1.595929 CAACTAACCACGCCACGGT 60.596 57.895 0.00 0.00 38.85 4.83
1476 3692 0.319727 CAACTAACCACGCCACGGTA 60.320 55.000 0.00 0.00 34.99 4.02
1477 3693 0.319813 AACTAACCACGCCACGGTAC 60.320 55.000 0.00 0.00 34.99 3.34
1495 3711 5.541098 GGTACGCTGCTAGTTATTGTTTT 57.459 39.130 0.00 0.00 0.00 2.43
1496 3712 5.557388 GGTACGCTGCTAGTTATTGTTTTC 58.443 41.667 0.00 0.00 0.00 2.29
1497 3713 4.680171 ACGCTGCTAGTTATTGTTTTCC 57.320 40.909 0.00 0.00 0.00 3.13
1498 3714 4.324267 ACGCTGCTAGTTATTGTTTTCCT 58.676 39.130 0.00 0.00 0.00 3.36
1499 3715 4.392138 ACGCTGCTAGTTATTGTTTTCCTC 59.608 41.667 0.00 0.00 0.00 3.71
1500 3716 4.492570 CGCTGCTAGTTATTGTTTTCCTCG 60.493 45.833 0.00 0.00 0.00 4.63
1501 3717 4.728021 GCTGCTAGTTATTGTTTTCCTCGC 60.728 45.833 0.00 0.00 0.00 5.03
1502 3718 3.687698 TGCTAGTTATTGTTTTCCTCGCC 59.312 43.478 0.00 0.00 0.00 5.54
1503 3719 3.687698 GCTAGTTATTGTTTTCCTCGCCA 59.312 43.478 0.00 0.00 0.00 5.69
1504 3720 4.436986 GCTAGTTATTGTTTTCCTCGCCAC 60.437 45.833 0.00 0.00 0.00 5.01
1505 3721 2.482721 AGTTATTGTTTTCCTCGCCACG 59.517 45.455 0.00 0.00 0.00 4.94
1506 3722 1.444836 TATTGTTTTCCTCGCCACGG 58.555 50.000 0.00 0.00 0.00 4.94
1507 3723 1.862602 ATTGTTTTCCTCGCCACGGC 61.863 55.000 0.00 0.00 37.85 5.68
1508 3724 3.733960 GTTTTCCTCGCCACGGCC 61.734 66.667 1.63 0.00 37.98 6.13
1515 3731 4.539083 TCGCCACGGCCGCATAAT 62.539 61.111 28.58 0.81 37.98 1.28
1516 3732 3.582120 CGCCACGGCCGCATAATT 61.582 61.111 28.58 0.00 37.98 1.40
1517 3733 2.248135 CGCCACGGCCGCATAATTA 61.248 57.895 28.58 0.00 37.98 1.40
1518 3734 1.281656 GCCACGGCCGCATAATTAC 59.718 57.895 28.58 2.03 34.56 1.89
1519 3735 1.946267 CCACGGCCGCATAATTACC 59.054 57.895 28.58 0.00 0.00 2.85
1521 3737 4.036977 CGGCCGCATAATTACCGT 57.963 55.556 14.67 0.00 39.05 4.83
1522 3738 1.567537 CGGCCGCATAATTACCGTG 59.432 57.895 14.67 0.00 39.05 4.94
1523 3739 1.281656 GGCCGCATAATTACCGTGC 59.718 57.895 0.00 0.29 35.59 5.34
1524 3740 1.164041 GGCCGCATAATTACCGTGCT 61.164 55.000 7.69 0.00 36.74 4.40
1525 3741 0.234884 GCCGCATAATTACCGTGCTC 59.765 55.000 7.69 0.00 36.74 4.26
1526 3742 1.577468 CCGCATAATTACCGTGCTCA 58.423 50.000 7.69 0.00 36.74 4.26
1527 3743 2.143122 CCGCATAATTACCGTGCTCAT 58.857 47.619 7.69 0.00 36.74 2.90
1528 3744 2.157668 CCGCATAATTACCGTGCTCATC 59.842 50.000 7.69 0.00 36.74 2.92
1529 3745 2.157668 CGCATAATTACCGTGCTCATCC 59.842 50.000 7.69 0.00 36.74 3.51
1530 3746 3.138304 GCATAATTACCGTGCTCATCCA 58.862 45.455 2.87 0.00 36.02 3.41
1531 3747 3.753272 GCATAATTACCGTGCTCATCCAT 59.247 43.478 2.87 0.00 36.02 3.41
1532 3748 4.378770 GCATAATTACCGTGCTCATCCATG 60.379 45.833 2.87 0.00 36.02 3.66
1533 3749 3.281727 AATTACCGTGCTCATCCATGT 57.718 42.857 0.00 0.00 0.00 3.21
1534 3750 2.022764 TTACCGTGCTCATCCATGTG 57.977 50.000 0.00 0.00 0.00 3.21
1535 3751 0.177836 TACCGTGCTCATCCATGTGG 59.822 55.000 0.00 0.00 0.00 4.17
1536 3752 1.820906 CCGTGCTCATCCATGTGGG 60.821 63.158 0.00 0.00 35.41 4.61
1570 3786 3.830744 TGGCCGTGTAGTAATTAGCAT 57.169 42.857 0.00 0.00 0.00 3.79
1576 3792 5.981315 GCCGTGTAGTAATTAGCATCACTTA 59.019 40.000 0.00 0.00 0.00 2.24
1616 3832 6.096705 TCACTGGGATGCTTAACAATTATTGG 59.903 38.462 9.88 0.00 34.12 3.16
1617 3833 5.163416 ACTGGGATGCTTAACAATTATTGGC 60.163 40.000 9.88 3.70 34.12 4.52
1620 3836 6.609212 TGGGATGCTTAACAATTATTGGCTAA 59.391 34.615 9.88 5.89 34.12 3.09
1631 3847 7.651808 ACAATTATTGGCTAATGCACTATCAC 58.348 34.615 9.88 0.00 41.91 3.06
1633 3849 3.931907 TTGGCTAATGCACTATCACCT 57.068 42.857 0.00 0.00 41.91 4.00
1635 3851 3.544684 TGGCTAATGCACTATCACCTTG 58.455 45.455 0.00 0.00 41.91 3.61
1636 3852 3.054434 TGGCTAATGCACTATCACCTTGT 60.054 43.478 0.00 0.00 41.91 3.16
1671 3910 1.919240 TCGTGCTTGAGAGGGAACTA 58.081 50.000 0.00 0.00 44.43 2.24
1728 3967 3.832527 ACAAGTCTAACATGGCAACCTT 58.167 40.909 0.00 0.00 0.00 3.50
1729 3968 3.569701 ACAAGTCTAACATGGCAACCTTG 59.430 43.478 12.35 12.35 35.21 3.61
1754 3993 4.817517 AGTTGAGTTGGTTCGTCGATATT 58.182 39.130 0.00 0.00 0.00 1.28
1859 4130 5.055642 AGTCGTCGTGTCAGATTTCAATA 57.944 39.130 0.00 0.00 0.00 1.90
1890 4162 0.112995 AAATCTTCAGGGTGCTGGCA 59.887 50.000 0.00 0.00 0.00 4.92
2092 4369 2.121538 GGGGCGATTTGCTCTTCCC 61.122 63.158 0.00 0.00 46.29 3.97
2112 4390 3.117169 CCCCAGGGATCATATTTGTTCCA 60.117 47.826 7.25 0.00 41.64 3.53
2147 4425 2.299503 TTTCCGTGGTGTCTGACGCA 62.300 55.000 21.53 6.55 34.18 5.24
2192 4470 1.228124 CTTGGTCCTTTCCGTGGCA 60.228 57.895 0.00 0.00 0.00 4.92
2249 4529 4.592997 AAAGAATTAGACCAAGGGGGAG 57.407 45.455 0.00 0.00 41.15 4.30
2542 4822 6.071320 AGCCCTTTCTTTTTCTGTACAATCT 58.929 36.000 0.00 0.00 0.00 2.40
2554 4834 4.399618 TCTGTACAATCTGTAGACCTCAGC 59.600 45.833 0.00 0.00 32.84 4.26
2865 5145 1.863454 GGTTCGTATCAGCTGATGCAG 59.137 52.381 34.42 27.49 42.74 4.41
2951 5231 7.274686 GTGAGCTCTAAACACTATCTTCACTTC 59.725 40.741 16.19 0.00 0.00 3.01
3074 5354 3.636300 TCATGCTGGCTTTGTGTTAACTT 59.364 39.130 7.22 0.00 0.00 2.66
3165 5445 9.914131 AGCATAAATACTTTTTCCTGAAACTTC 57.086 29.630 0.00 0.00 0.00 3.01
3223 5504 6.899393 TCTTTTTGTAACTGCAATGGATCT 57.101 33.333 0.00 0.00 0.00 2.75
3248 5529 5.068987 TGCCTTAATAATCATGGGAAACAGC 59.931 40.000 0.00 0.00 0.00 4.40
3256 5537 1.399440 CATGGGAAACAGCTGACGATG 59.601 52.381 23.35 15.12 0.00 3.84
3276 5557 5.699915 CGATGATCTCATGAGCCTATTTGTT 59.300 40.000 18.36 0.00 36.57 2.83
3281 5562 7.496920 TGATCTCATGAGCCTATTTGTTTACAG 59.503 37.037 18.36 0.00 0.00 2.74
3489 5783 7.801716 TCTGCAATAAATAGGGTCATGTTAC 57.198 36.000 0.00 0.00 0.00 2.50
3498 5792 0.871722 GGTCATGTTACGCTGTTGCA 59.128 50.000 0.00 0.00 39.64 4.08
3586 5880 6.147328 GGTAACATCAGGAACTTGTACTGTTC 59.853 42.308 17.84 17.84 42.00 3.18
3770 6065 6.360370 ACATGGAGATATATGTGTACCCAC 57.640 41.667 0.00 0.00 42.19 4.61
3866 6161 6.286758 CAGATACACTTGTCCAATATGCTCT 58.713 40.000 0.00 0.00 0.00 4.09
4150 6445 9.739276 TCTTGTGATTGAACTATTTAGTCCAAT 57.261 29.630 2.29 2.29 42.77 3.16
4200 6495 1.296392 TGCTAGTGCACGAGCCAAT 59.704 52.632 38.05 12.98 45.31 3.16
4213 6508 2.419673 CGAGCCAATGTTATGTTGCTCA 59.580 45.455 9.63 0.00 33.40 4.26
4268 6563 3.891049 AGCCATACTTTCAGAATCACCC 58.109 45.455 0.00 0.00 0.00 4.61
4331 6626 4.934075 TTCTCACAGAAAATGAGCATCG 57.066 40.909 0.00 0.00 42.84 3.84
4358 6653 4.706842 TGGAAGTTCCATTATAGGGCTC 57.293 45.455 21.05 0.00 42.67 4.70
4359 6654 4.044308 TGGAAGTTCCATTATAGGGCTCA 58.956 43.478 21.05 0.00 42.67 4.26
4360 6655 4.665009 TGGAAGTTCCATTATAGGGCTCAT 59.335 41.667 21.05 0.00 42.67 2.90
4361 6656 5.134339 TGGAAGTTCCATTATAGGGCTCATT 59.866 40.000 21.05 0.00 42.67 2.57
4362 6657 5.707764 GGAAGTTCCATTATAGGGCTCATTC 59.292 44.000 17.44 0.00 36.28 2.67
4363 6658 4.899502 AGTTCCATTATAGGGCTCATTCG 58.100 43.478 0.00 0.00 0.00 3.34
4364 6659 3.981071 TCCATTATAGGGCTCATTCGG 57.019 47.619 0.00 0.00 0.00 4.30
4365 6660 3.248024 TCCATTATAGGGCTCATTCGGT 58.752 45.455 0.00 0.00 0.00 4.69
4366 6661 3.650942 TCCATTATAGGGCTCATTCGGTT 59.349 43.478 0.00 0.00 0.00 4.44
4367 6662 4.104102 TCCATTATAGGGCTCATTCGGTTT 59.896 41.667 0.00 0.00 0.00 3.27
4368 6663 4.216257 CCATTATAGGGCTCATTCGGTTTG 59.784 45.833 0.00 0.00 0.00 2.93
4369 6664 2.348411 ATAGGGCTCATTCGGTTTGG 57.652 50.000 0.00 0.00 0.00 3.28
4370 6665 1.281419 TAGGGCTCATTCGGTTTGGA 58.719 50.000 0.00 0.00 0.00 3.53
4371 6666 0.035056 AGGGCTCATTCGGTTTGGAG 60.035 55.000 0.00 0.00 0.00 3.86
4372 6667 1.032114 GGGCTCATTCGGTTTGGAGG 61.032 60.000 0.00 0.00 0.00 4.30
4373 6668 0.035439 GGCTCATTCGGTTTGGAGGA 60.035 55.000 0.00 0.00 0.00 3.71
4374 6669 1.408822 GGCTCATTCGGTTTGGAGGAT 60.409 52.381 0.00 0.00 0.00 3.24
4375 6670 2.369394 GCTCATTCGGTTTGGAGGATT 58.631 47.619 0.00 0.00 0.00 3.01
4376 6671 2.755103 GCTCATTCGGTTTGGAGGATTT 59.245 45.455 0.00 0.00 0.00 2.17
4377 6672 3.181496 GCTCATTCGGTTTGGAGGATTTC 60.181 47.826 0.00 0.00 0.00 2.17
4378 6673 4.009675 CTCATTCGGTTTGGAGGATTTCA 58.990 43.478 0.00 0.00 0.00 2.69
4379 6674 4.599041 TCATTCGGTTTGGAGGATTTCAT 58.401 39.130 0.00 0.00 0.00 2.57
4380 6675 4.398988 TCATTCGGTTTGGAGGATTTCATG 59.601 41.667 0.00 0.00 0.00 3.07
4381 6676 3.712016 TCGGTTTGGAGGATTTCATGA 57.288 42.857 0.00 0.00 0.00 3.07
4382 6677 4.235079 TCGGTTTGGAGGATTTCATGAT 57.765 40.909 0.00 0.00 0.00 2.45
4383 6678 3.947196 TCGGTTTGGAGGATTTCATGATG 59.053 43.478 0.00 0.00 0.00 3.07
4384 6679 3.696051 CGGTTTGGAGGATTTCATGATGT 59.304 43.478 0.00 0.00 0.00 3.06
4385 6680 4.881273 CGGTTTGGAGGATTTCATGATGTA 59.119 41.667 0.00 0.00 0.00 2.29
4386 6681 5.008019 CGGTTTGGAGGATTTCATGATGTAG 59.992 44.000 0.00 0.00 0.00 2.74
4387 6682 5.300286 GGTTTGGAGGATTTCATGATGTAGG 59.700 44.000 0.00 0.00 0.00 3.18
4388 6683 5.974156 TTGGAGGATTTCATGATGTAGGA 57.026 39.130 0.00 0.00 0.00 2.94
4389 6684 5.974156 TGGAGGATTTCATGATGTAGGAA 57.026 39.130 0.00 0.00 0.00 3.36
4390 6685 6.520021 TGGAGGATTTCATGATGTAGGAAT 57.480 37.500 0.00 0.00 0.00 3.01
4391 6686 6.914665 TGGAGGATTTCATGATGTAGGAATT 58.085 36.000 0.00 0.00 0.00 2.17
4392 6687 8.044574 TGGAGGATTTCATGATGTAGGAATTA 57.955 34.615 0.00 0.00 0.00 1.40
4393 6688 8.159447 TGGAGGATTTCATGATGTAGGAATTAG 58.841 37.037 0.00 0.00 0.00 1.73
4394 6689 8.378565 GGAGGATTTCATGATGTAGGAATTAGA 58.621 37.037 0.00 0.00 0.00 2.10
4395 6690 9.784531 GAGGATTTCATGATGTAGGAATTAGAA 57.215 33.333 0.00 0.00 0.00 2.10
4396 6691 9.566432 AGGATTTCATGATGTAGGAATTAGAAC 57.434 33.333 0.00 0.00 0.00 3.01
4397 6692 9.566432 GGATTTCATGATGTAGGAATTAGAACT 57.434 33.333 0.00 0.00 0.00 3.01
4421 6716 9.892130 ACTAGTATAGGAATTTTATAGCATGGC 57.108 33.333 0.00 0.00 44.97 4.40
4422 6717 9.890629 CTAGTATAGGAATTTTATAGCATGGCA 57.109 33.333 0.00 0.00 34.22 4.92
4423 6718 8.567285 AGTATAGGAATTTTATAGCATGGCAC 57.433 34.615 0.00 0.00 0.00 5.01
4424 6719 8.386264 AGTATAGGAATTTTATAGCATGGCACT 58.614 33.333 0.00 0.00 0.00 4.40
4425 6720 9.014297 GTATAGGAATTTTATAGCATGGCACTT 57.986 33.333 0.00 0.00 0.00 3.16
4426 6721 6.152932 AGGAATTTTATAGCATGGCACTTG 57.847 37.500 0.00 0.00 0.00 3.16
4427 6722 4.746611 GGAATTTTATAGCATGGCACTTGC 59.253 41.667 4.93 4.93 40.45 4.01
4438 6733 3.882131 GCACTTGCCATCCTAAGGA 57.118 52.632 0.00 0.00 33.12 3.36
4439 6734 2.355010 GCACTTGCCATCCTAAGGAT 57.645 50.000 0.00 0.00 44.21 3.24
4440 6735 2.659428 GCACTTGCCATCCTAAGGATT 58.341 47.619 0.00 0.00 40.98 3.01
4441 6736 3.026694 GCACTTGCCATCCTAAGGATTT 58.973 45.455 0.00 0.00 40.98 2.17
4442 6737 3.181483 GCACTTGCCATCCTAAGGATTTG 60.181 47.826 0.00 0.00 40.98 2.32
4443 6738 4.272489 CACTTGCCATCCTAAGGATTTGA 58.728 43.478 0.00 0.00 39.79 2.69
4444 6739 4.096984 CACTTGCCATCCTAAGGATTTGAC 59.903 45.833 0.00 0.00 39.79 3.18
4445 6740 4.018050 ACTTGCCATCCTAAGGATTTGACT 60.018 41.667 0.00 0.00 39.79 3.41
4446 6741 4.156455 TGCCATCCTAAGGATTTGACTC 57.844 45.455 0.00 0.00 39.79 3.36
4447 6742 3.134458 GCCATCCTAAGGATTTGACTCG 58.866 50.000 0.00 0.00 39.79 4.18
4448 6743 3.134458 CCATCCTAAGGATTTGACTCGC 58.866 50.000 0.00 0.00 39.79 5.03
4449 6744 2.981859 TCCTAAGGATTTGACTCGCC 57.018 50.000 0.00 0.00 0.00 5.54
4450 6745 2.467880 TCCTAAGGATTTGACTCGCCT 58.532 47.619 0.00 0.00 0.00 5.52
4451 6746 2.431057 TCCTAAGGATTTGACTCGCCTC 59.569 50.000 0.00 0.00 0.00 4.70
4452 6747 2.464865 CTAAGGATTTGACTCGCCTCG 58.535 52.381 0.00 0.00 0.00 4.63
4453 6748 0.608640 AAGGATTTGACTCGCCTCGT 59.391 50.000 0.00 0.00 0.00 4.18
4454 6749 0.608640 AGGATTTGACTCGCCTCGTT 59.391 50.000 0.00 0.00 0.00 3.85
4455 6750 1.000145 GGATTTGACTCGCCTCGTTC 59.000 55.000 0.00 0.00 0.00 3.95
4456 6751 1.000145 GATTTGACTCGCCTCGTTCC 59.000 55.000 0.00 0.00 0.00 3.62
4457 6752 0.608640 ATTTGACTCGCCTCGTTCCT 59.391 50.000 0.00 0.00 0.00 3.36
4458 6753 1.250328 TTTGACTCGCCTCGTTCCTA 58.750 50.000 0.00 0.00 0.00 2.94
4459 6754 0.524862 TTGACTCGCCTCGTTCCTAC 59.475 55.000 0.00 0.00 0.00 3.18
4471 6766 3.548216 CGTTCCTACGCGTAAAATGAG 57.452 47.619 20.97 9.01 41.41 2.90
4472 6767 2.284855 CGTTCCTACGCGTAAAATGAGC 60.285 50.000 20.97 14.10 41.41 4.26
4473 6768 2.928116 GTTCCTACGCGTAAAATGAGCT 59.072 45.455 20.97 0.00 0.00 4.09
4474 6769 3.241067 TCCTACGCGTAAAATGAGCTT 57.759 42.857 20.97 0.00 0.00 3.74
4475 6770 3.592059 TCCTACGCGTAAAATGAGCTTT 58.408 40.909 20.97 0.00 0.00 3.51
4476 6771 3.369756 TCCTACGCGTAAAATGAGCTTTG 59.630 43.478 20.97 3.65 0.00 2.77
4477 6772 3.369756 CCTACGCGTAAAATGAGCTTTGA 59.630 43.478 20.97 0.00 0.00 2.69
4478 6773 3.455619 ACGCGTAAAATGAGCTTTGAG 57.544 42.857 11.67 0.00 0.00 3.02
4479 6774 2.806244 ACGCGTAAAATGAGCTTTGAGT 59.194 40.909 11.67 0.00 0.00 3.41
4480 6775 3.155998 CGCGTAAAATGAGCTTTGAGTG 58.844 45.455 0.00 0.00 0.00 3.51
4481 6776 3.492313 GCGTAAAATGAGCTTTGAGTGG 58.508 45.455 0.00 0.00 0.00 4.00
4482 6777 3.188460 GCGTAAAATGAGCTTTGAGTGGA 59.812 43.478 0.00 0.00 0.00 4.02
4483 6778 4.142600 GCGTAAAATGAGCTTTGAGTGGAT 60.143 41.667 0.00 0.00 0.00 3.41
4484 6779 5.327091 CGTAAAATGAGCTTTGAGTGGATG 58.673 41.667 0.00 0.00 0.00 3.51
4485 6780 5.106555 CGTAAAATGAGCTTTGAGTGGATGT 60.107 40.000 0.00 0.00 0.00 3.06
4486 6781 4.778534 AAATGAGCTTTGAGTGGATGTG 57.221 40.909 0.00 0.00 0.00 3.21
4487 6782 2.936919 TGAGCTTTGAGTGGATGTGT 57.063 45.000 0.00 0.00 0.00 3.72
4488 6783 4.558226 ATGAGCTTTGAGTGGATGTGTA 57.442 40.909 0.00 0.00 0.00 2.90
4489 6784 4.350368 TGAGCTTTGAGTGGATGTGTAA 57.650 40.909 0.00 0.00 0.00 2.41
4490 6785 4.910195 TGAGCTTTGAGTGGATGTGTAAT 58.090 39.130 0.00 0.00 0.00 1.89
4491 6786 5.316167 TGAGCTTTGAGTGGATGTGTAATT 58.684 37.500 0.00 0.00 0.00 1.40
4492 6787 5.769662 TGAGCTTTGAGTGGATGTGTAATTT 59.230 36.000 0.00 0.00 0.00 1.82
4493 6788 6.072508 TGAGCTTTGAGTGGATGTGTAATTTC 60.073 38.462 0.00 0.00 0.00 2.17
4494 6789 5.183904 AGCTTTGAGTGGATGTGTAATTTCC 59.816 40.000 0.00 0.00 0.00 3.13
4495 6790 5.183904 GCTTTGAGTGGATGTGTAATTTCCT 59.816 40.000 0.00 0.00 0.00 3.36
4496 6791 6.623767 GCTTTGAGTGGATGTGTAATTTCCTC 60.624 42.308 0.00 0.00 0.00 3.71
4497 6792 4.843728 TGAGTGGATGTGTAATTTCCTCC 58.156 43.478 0.00 0.00 0.00 4.30
4498 6793 4.288366 TGAGTGGATGTGTAATTTCCTCCA 59.712 41.667 0.00 0.00 0.00 3.86
4499 6794 5.222027 TGAGTGGATGTGTAATTTCCTCCAA 60.222 40.000 0.00 0.00 34.75 3.53
4500 6795 5.640147 AGTGGATGTGTAATTTCCTCCAAA 58.360 37.500 0.00 0.00 34.75 3.28
4501 6796 6.074648 AGTGGATGTGTAATTTCCTCCAAAA 58.925 36.000 0.00 0.00 34.75 2.44
4502 6797 6.553100 AGTGGATGTGTAATTTCCTCCAAAAA 59.447 34.615 0.00 0.00 34.75 1.94
4503 6798 6.645003 GTGGATGTGTAATTTCCTCCAAAAAC 59.355 38.462 0.00 0.00 34.75 2.43
4504 6799 6.325028 TGGATGTGTAATTTCCTCCAAAAACA 59.675 34.615 0.00 0.00 30.15 2.83
4505 6800 6.868339 GGATGTGTAATTTCCTCCAAAAACAG 59.132 38.462 0.00 0.00 29.21 3.16
4506 6801 7.255801 GGATGTGTAATTTCCTCCAAAAACAGA 60.256 37.037 0.00 0.00 29.21 3.41
4507 6802 7.038154 TGTGTAATTTCCTCCAAAAACAGAG 57.962 36.000 0.00 0.00 29.21 3.35
4519 6814 8.115490 CTCCAAAAACAGAGGAAATGAATAGT 57.885 34.615 0.00 0.00 0.00 2.12
4520 6815 9.231297 CTCCAAAAACAGAGGAAATGAATAGTA 57.769 33.333 0.00 0.00 0.00 1.82
4521 6816 9.753674 TCCAAAAACAGAGGAAATGAATAGTAT 57.246 29.630 0.00 0.00 0.00 2.12
4543 6838 9.128404 AGTATTCCTACGATATTTCTGTACACA 57.872 33.333 0.00 0.00 32.82 3.72
4544 6839 9.909644 GTATTCCTACGATATTTCTGTACACAT 57.090 33.333 0.00 0.00 0.00 3.21
4546 6841 9.832445 ATTCCTACGATATTTCTGTACACATTT 57.168 29.630 0.00 0.00 0.00 2.32
4547 6842 8.867112 TCCTACGATATTTCTGTACACATTTC 57.133 34.615 0.00 0.00 0.00 2.17
4548 6843 7.924412 TCCTACGATATTTCTGTACACATTTCC 59.076 37.037 0.00 0.00 0.00 3.13
4549 6844 7.926555 CCTACGATATTTCTGTACACATTTCCT 59.073 37.037 0.00 0.00 0.00 3.36
4550 6845 9.961265 CTACGATATTTCTGTACACATTTCCTA 57.039 33.333 0.00 0.00 0.00 2.94
4551 6846 8.644318 ACGATATTTCTGTACACATTTCCTAC 57.356 34.615 0.00 0.00 0.00 3.18
4552 6847 8.255206 ACGATATTTCTGTACACATTTCCTACA 58.745 33.333 0.00 0.00 0.00 2.74
4553 6848 9.093970 CGATATTTCTGTACACATTTCCTACAA 57.906 33.333 0.00 0.00 0.00 2.41
4556 6851 6.870971 TTCTGTACACATTTCCTACAAACC 57.129 37.500 0.00 0.00 0.00 3.27
4557 6852 4.992319 TCTGTACACATTTCCTACAAACCG 59.008 41.667 0.00 0.00 0.00 4.44
4558 6853 4.958509 TGTACACATTTCCTACAAACCGA 58.041 39.130 0.00 0.00 0.00 4.69
4559 6854 5.366460 TGTACACATTTCCTACAAACCGAA 58.634 37.500 0.00 0.00 0.00 4.30
4560 6855 5.998981 TGTACACATTTCCTACAAACCGAAT 59.001 36.000 0.00 0.00 0.00 3.34
4561 6856 5.371115 ACACATTTCCTACAAACCGAATG 57.629 39.130 0.00 0.00 0.00 2.67
4562 6857 4.165779 CACATTTCCTACAAACCGAATGC 58.834 43.478 0.00 0.00 0.00 3.56
4563 6858 3.823873 ACATTTCCTACAAACCGAATGCA 59.176 39.130 0.00 0.00 0.00 3.96
4564 6859 4.462483 ACATTTCCTACAAACCGAATGCAT 59.538 37.500 0.00 0.00 0.00 3.96
4565 6860 4.695217 TTTCCTACAAACCGAATGCATC 57.305 40.909 0.00 0.00 0.00 3.91
4566 6861 3.627395 TCCTACAAACCGAATGCATCT 57.373 42.857 0.00 0.00 0.00 2.90
4567 6862 4.746535 TCCTACAAACCGAATGCATCTA 57.253 40.909 0.00 0.00 0.00 1.98
4568 6863 5.290493 TCCTACAAACCGAATGCATCTAT 57.710 39.130 0.00 0.00 0.00 1.98
4569 6864 6.413783 TCCTACAAACCGAATGCATCTATA 57.586 37.500 0.00 0.00 0.00 1.31
4570 6865 6.455647 TCCTACAAACCGAATGCATCTATAG 58.544 40.000 0.00 0.00 0.00 1.31
4571 6866 5.639506 CCTACAAACCGAATGCATCTATAGG 59.360 44.000 0.00 1.96 0.00 2.57
4572 6867 5.290493 ACAAACCGAATGCATCTATAGGA 57.710 39.130 0.00 0.00 0.00 2.94
4573 6868 5.680619 ACAAACCGAATGCATCTATAGGAA 58.319 37.500 0.00 0.00 0.00 3.36
4574 6869 6.119536 ACAAACCGAATGCATCTATAGGAAA 58.880 36.000 0.00 0.00 0.00 3.13
4575 6870 6.772716 ACAAACCGAATGCATCTATAGGAAAT 59.227 34.615 0.00 0.00 0.00 2.17
4576 6871 7.285401 ACAAACCGAATGCATCTATAGGAAATT 59.715 33.333 0.00 0.00 0.00 1.82
4577 6872 7.823745 AACCGAATGCATCTATAGGAAATTT 57.176 32.000 0.00 0.00 0.00 1.82
4578 6873 7.823745 ACCGAATGCATCTATAGGAAATTTT 57.176 32.000 0.00 0.00 0.00 1.82
4579 6874 7.875971 ACCGAATGCATCTATAGGAAATTTTC 58.124 34.615 0.00 0.24 0.00 2.29
4593 6888 5.970592 GGAAATTTTCCTCTGGAATCCTTG 58.029 41.667 19.01 0.00 46.57 3.61
4594 6889 5.481824 GGAAATTTTCCTCTGGAATCCTTGT 59.518 40.000 19.01 0.00 46.57 3.16
4595 6890 6.014242 GGAAATTTTCCTCTGGAATCCTTGTT 60.014 38.462 19.01 0.00 46.57 2.83
4596 6891 6.596309 AATTTTCCTCTGGAATCCTTGTTC 57.404 37.500 0.00 0.00 41.71 3.18
4597 6892 3.721087 TTCCTCTGGAATCCTTGTTCC 57.279 47.619 0.00 0.00 46.35 3.62
4598 6893 2.921221 TCCTCTGGAATCCTTGTTCCT 58.079 47.619 0.00 0.00 46.32 3.36
4599 6894 4.074799 TCCTCTGGAATCCTTGTTCCTA 57.925 45.455 0.00 0.00 46.32 2.94
4600 6895 4.635473 TCCTCTGGAATCCTTGTTCCTAT 58.365 43.478 0.00 0.00 46.32 2.57
4601 6896 4.410228 TCCTCTGGAATCCTTGTTCCTATG 59.590 45.833 0.00 0.00 46.32 2.23
4602 6897 4.164988 CCTCTGGAATCCTTGTTCCTATGT 59.835 45.833 0.00 0.00 46.32 2.29
4603 6898 5.102953 TCTGGAATCCTTGTTCCTATGTG 57.897 43.478 0.00 0.00 46.32 3.21
4604 6899 4.536090 TCTGGAATCCTTGTTCCTATGTGT 59.464 41.667 0.00 0.00 46.32 3.72
4605 6900 5.014123 TCTGGAATCCTTGTTCCTATGTGTT 59.986 40.000 0.00 0.00 46.32 3.32
4606 6901 5.640147 TGGAATCCTTGTTCCTATGTGTTT 58.360 37.500 0.00 0.00 46.32 2.83
4607 6902 5.710099 TGGAATCCTTGTTCCTATGTGTTTC 59.290 40.000 0.00 0.00 46.32 2.78
4608 6903 5.125578 GGAATCCTTGTTCCTATGTGTTTCC 59.874 44.000 0.00 0.00 43.49 3.13
4609 6904 4.993705 TCCTTGTTCCTATGTGTTTCCT 57.006 40.909 0.00 0.00 0.00 3.36
4610 6905 6.636454 ATCCTTGTTCCTATGTGTTTCCTA 57.364 37.500 0.00 0.00 0.00 2.94
4611 6906 6.636454 TCCTTGTTCCTATGTGTTTCCTAT 57.364 37.500 0.00 0.00 0.00 2.57
4612 6907 6.414732 TCCTTGTTCCTATGTGTTTCCTATG 58.585 40.000 0.00 0.00 0.00 2.23
4613 6908 6.214615 TCCTTGTTCCTATGTGTTTCCTATGA 59.785 38.462 0.00 0.00 0.00 2.15
4614 6909 6.884295 CCTTGTTCCTATGTGTTTCCTATGAA 59.116 38.462 0.00 0.00 0.00 2.57
4615 6910 7.393234 CCTTGTTCCTATGTGTTTCCTATGAAA 59.607 37.037 0.00 0.00 38.14 2.69
4616 6911 8.698973 TTGTTCCTATGTGTTTCCTATGAAAA 57.301 30.769 0.00 0.00 41.92 2.29
4617 6912 8.877864 TGTTCCTATGTGTTTCCTATGAAAAT 57.122 30.769 0.00 0.00 41.92 1.82
4618 6913 8.956426 TGTTCCTATGTGTTTCCTATGAAAATC 58.044 33.333 0.00 0.00 41.92 2.17
4619 6914 8.406297 GTTCCTATGTGTTTCCTATGAAAATCC 58.594 37.037 0.00 0.00 41.92 3.01
4620 6915 7.872138 TCCTATGTGTTTCCTATGAAAATCCT 58.128 34.615 0.00 0.00 41.92 3.24
4621 6916 7.993183 TCCTATGTGTTTCCTATGAAAATCCTC 59.007 37.037 0.00 0.00 41.92 3.71
4622 6917 7.229506 CCTATGTGTTTCCTATGAAAATCCTCC 59.770 40.741 0.00 0.00 41.92 4.30
4623 6918 5.886609 TGTGTTTCCTATGAAAATCCTCCA 58.113 37.500 0.00 0.00 41.92 3.86
4624 6919 6.310941 TGTGTTTCCTATGAAAATCCTCCAA 58.689 36.000 0.00 0.00 41.92 3.53
4625 6920 6.780031 TGTGTTTCCTATGAAAATCCTCCAAA 59.220 34.615 0.00 0.00 41.92 3.28
4626 6921 7.090808 GTGTTTCCTATGAAAATCCTCCAAAC 58.909 38.462 0.00 0.00 41.92 2.93
4627 6922 6.210584 TGTTTCCTATGAAAATCCTCCAAACC 59.789 38.462 0.00 0.00 41.92 3.27
4628 6923 4.523083 TCCTATGAAAATCCTCCAAACCG 58.477 43.478 0.00 0.00 0.00 4.44
4629 6924 4.226394 TCCTATGAAAATCCTCCAAACCGA 59.774 41.667 0.00 0.00 0.00 4.69
4630 6925 4.947388 CCTATGAAAATCCTCCAAACCGAA 59.053 41.667 0.00 0.00 0.00 4.30
4631 6926 5.594317 CCTATGAAAATCCTCCAAACCGAAT 59.406 40.000 0.00 0.00 0.00 3.34
4632 6927 6.770785 CCTATGAAAATCCTCCAAACCGAATA 59.229 38.462 0.00 0.00 0.00 1.75
4633 6928 6.699575 ATGAAAATCCTCCAAACCGAATAG 57.300 37.500 0.00 0.00 0.00 1.73
4635 6930 2.640316 ATCCTCCAAACCGAATAGGC 57.360 50.000 0.00 0.00 46.52 3.93
4636 6931 0.544697 TCCTCCAAACCGAATAGGCC 59.455 55.000 0.00 0.00 46.52 5.19
4637 6932 0.465642 CCTCCAAACCGAATAGGCCC 60.466 60.000 0.00 0.00 46.52 5.80
4713 7008 3.138304 TGCCAACTGTCACACATTAGTC 58.862 45.455 0.00 0.00 0.00 2.59
4719 7014 7.042456 GCCAACTGTCACACATTAGTCATATAG 60.042 40.741 0.00 0.00 0.00 1.31
4786 7081 7.497595 TGTAGACTACTATGCGGATTGAAATT 58.502 34.615 13.67 0.00 0.00 1.82
4802 7097 7.489113 GGATTGAAATTGGTGAACATACACATC 59.511 37.037 0.00 0.00 41.88 3.06
4885 7340 5.355350 CAGAGGGAGTATTTTTGTGTGGATC 59.645 44.000 0.00 0.00 0.00 3.36
4892 7347 7.224949 GGAGTATTTTTGTGTGGATCTAGTAGC 59.775 40.741 0.00 0.00 0.00 3.58
4912 7367 1.620819 CTGAGTCAGGCTAACAGTGGT 59.379 52.381 12.67 0.00 0.00 4.16
4913 7368 2.037772 CTGAGTCAGGCTAACAGTGGTT 59.962 50.000 12.67 0.00 41.06 3.67
4931 7386 3.055094 TGGTTTTTGCCCTTGTGCTAAAA 60.055 39.130 0.00 0.00 41.37 1.52
5169 7628 2.143876 ACCAATGCCAGAACCATACC 57.856 50.000 0.00 0.00 0.00 2.73
5318 7780 2.157668 CGAACAGCGTTGCTTGATTACT 59.842 45.455 0.00 0.00 36.40 2.24
5363 7826 7.262772 TGTAATACAGCACCATTACTCTGTAC 58.737 38.462 12.61 0.00 42.57 2.90
5419 7885 3.008330 CCAGGAGTTGAATTCTGAGCTG 58.992 50.000 7.05 0.00 0.00 4.24
5477 7943 4.927267 TCAGGTCCCTGATTGTGTTATT 57.073 40.909 12.01 0.00 46.80 1.40
5528 7994 4.394439 TTTACACCAAACCTTTTGAGCC 57.606 40.909 0.09 0.00 0.00 4.70
5556 8022 5.128499 TGTGTTGAGGTTTGGTTTTCATCAT 59.872 36.000 0.00 0.00 0.00 2.45
5558 8024 7.147828 TGTGTTGAGGTTTGGTTTTCATCATTA 60.148 33.333 0.00 0.00 0.00 1.90
5575 8041 9.662947 TTCATCATTATTCTAGTATGCATCCTG 57.337 33.333 0.19 0.00 0.00 3.86
5576 8042 9.039165 TCATCATTATTCTAGTATGCATCCTGA 57.961 33.333 0.19 0.00 0.00 3.86
5590 8144 5.096521 TGCATCCTGATATCCTGTATTCCT 58.903 41.667 0.00 0.00 0.00 3.36
5591 8145 5.549228 TGCATCCTGATATCCTGTATTCCTT 59.451 40.000 0.00 0.00 0.00 3.36
5592 8146 6.044754 TGCATCCTGATATCCTGTATTCCTTT 59.955 38.462 0.00 0.00 0.00 3.11
5610 8165 5.540911 TCCTTTTCCATGCTTGTCATTTTC 58.459 37.500 0.00 0.00 31.79 2.29
5699 9180 4.641989 TGCAAAATAGGATTCTCTCAAGGC 59.358 41.667 0.00 0.00 0.00 4.35
5721 9202 3.624861 CGAAGGTGAAGATGAAAGGATGG 59.375 47.826 0.00 0.00 0.00 3.51
5835 9318 3.871594 GGGTAGAATGTCGTTCAAGGATG 59.128 47.826 7.53 0.00 39.39 3.51
5836 9319 4.382685 GGGTAGAATGTCGTTCAAGGATGA 60.383 45.833 7.53 0.00 39.39 2.92
5907 9393 6.455360 ACACATGGATGATATTGGTTGTTC 57.545 37.500 0.00 0.00 0.00 3.18
5948 9434 5.104941 TCAACAAGCTAGCTAGGCTTATCAA 60.105 40.000 19.70 9.43 46.59 2.57
5949 9435 5.359194 ACAAGCTAGCTAGGCTTATCAAA 57.641 39.130 19.70 0.00 46.59 2.69
5950 9436 5.119694 ACAAGCTAGCTAGGCTTATCAAAC 58.880 41.667 19.70 1.47 46.59 2.93
6068 9555 3.439825 TCGTGATCCACATGTCAATTTGG 59.560 43.478 0.00 0.00 35.29 3.28
6077 9564 6.014755 TCCACATGTCAATTTGGCAAAGAATA 60.015 34.615 18.61 5.06 34.67 1.75
6084 9571 7.541783 TGTCAATTTGGCAAAGAATAAGAATCG 59.458 33.333 18.61 0.00 0.00 3.34
6091 9578 6.757010 TGGCAAAGAATAAGAATCGAGTACTC 59.243 38.462 13.18 13.18 0.00 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.765250 TTCTCGCACGCACCTCCTTC 62.765 60.000 0.00 0.00 0.00 3.46
1 2 2.377628 TTTCTCGCACGCACCTCCTT 62.378 55.000 0.00 0.00 0.00 3.36
2 3 2.771763 CTTTCTCGCACGCACCTCCT 62.772 60.000 0.00 0.00 0.00 3.69
3 4 2.357034 TTTCTCGCACGCACCTCC 60.357 61.111 0.00 0.00 0.00 4.30
4 5 0.737715 ATCTTTCTCGCACGCACCTC 60.738 55.000 0.00 0.00 0.00 3.85
5 6 1.016130 CATCTTTCTCGCACGCACCT 61.016 55.000 0.00 0.00 0.00 4.00
8 9 1.020861 ATGCATCTTTCTCGCACGCA 61.021 50.000 0.00 0.00 38.73 5.24
173 176 3.636300 CAGTGAAATTCAGGTGGTGGAAA 59.364 43.478 0.00 0.00 0.00 3.13
190 193 0.813610 CGTGCAGGGTTGAACAGTGA 60.814 55.000 0.00 0.00 31.76 3.41
221 224 1.317319 GCAAAATCCGCACGAAATTCG 59.683 47.619 14.35 14.35 46.93 3.34
245 248 0.037326 TGCTCAGCTCAACCCTTACG 60.037 55.000 0.00 0.00 0.00 3.18
246 249 2.409948 ATGCTCAGCTCAACCCTTAC 57.590 50.000 0.00 0.00 0.00 2.34
335 2161 1.330655 GGAGCCTCTTGGTCGATGGA 61.331 60.000 0.00 0.00 42.55 3.41
372 2198 6.822667 TTGAGCTGACACAACATCATAAAT 57.177 33.333 0.00 0.00 0.00 1.40
377 2203 3.479489 ACATTGAGCTGACACAACATCA 58.521 40.909 0.00 0.00 0.00 3.07
403 2257 4.642885 ACACTCTACTCCTATGAGCACTTC 59.357 45.833 0.00 0.00 42.74 3.01
449 2304 9.276590 CAATCACAGATGGTTACATACACATAT 57.723 33.333 0.00 0.00 37.47 1.78
451 2306 7.112122 ACAATCACAGATGGTTACATACACAT 58.888 34.615 0.00 0.00 37.47 3.21
452 2307 6.472016 ACAATCACAGATGGTTACATACACA 58.528 36.000 0.00 0.00 37.47 3.72
460 2315 7.663493 TCAACACAATACAATCACAGATGGTTA 59.337 33.333 0.00 0.00 0.00 2.85
461 2316 6.489700 TCAACACAATACAATCACAGATGGTT 59.510 34.615 0.00 0.00 0.00 3.67
463 2318 6.499234 TCAACACAATACAATCACAGATGG 57.501 37.500 0.00 0.00 0.00 3.51
478 2333 6.631971 TCTAATGCACATCTTTCAACACAA 57.368 33.333 0.00 0.00 0.00 3.33
485 2340 7.709947 TGGATGATTTCTAATGCACATCTTTC 58.290 34.615 8.89 0.00 35.80 2.62
516 2371 5.125100 TGGAATGCTGACTTCACATTTTC 57.875 39.130 7.84 5.79 34.28 2.29
520 2375 3.285484 GGATGGAATGCTGACTTCACAT 58.715 45.455 0.00 0.00 0.00 3.21
525 2380 2.158900 CGTAGGGATGGAATGCTGACTT 60.159 50.000 0.00 0.00 33.81 3.01
526 2381 1.414181 CGTAGGGATGGAATGCTGACT 59.586 52.381 0.00 0.00 33.81 3.41
527 2382 1.871080 CGTAGGGATGGAATGCTGAC 58.129 55.000 0.00 0.00 33.81 3.51
597 2455 5.650266 TGGCAGAAGTTCAAGTTAAAACTCA 59.350 36.000 5.50 0.00 38.57 3.41
607 2465 5.044428 CTTCAGAATGGCAGAAGTTCAAG 57.956 43.478 5.50 0.00 35.92 3.02
661 2521 4.472108 AGGATTTTCCATGTAACGGGTAGA 59.528 41.667 0.00 0.00 39.61 2.59
662 2522 4.574828 CAGGATTTTCCATGTAACGGGTAG 59.425 45.833 0.00 0.00 39.61 3.18
663 2523 4.225492 TCAGGATTTTCCATGTAACGGGTA 59.775 41.667 0.00 0.00 39.61 3.69
664 2524 3.009695 TCAGGATTTTCCATGTAACGGGT 59.990 43.478 0.00 0.00 39.61 5.28
665 2525 3.616219 TCAGGATTTTCCATGTAACGGG 58.384 45.455 0.00 0.00 39.61 5.28
683 2543 5.655532 AGAAATTGTGGGAGATGGATTTCAG 59.344 40.000 8.70 0.00 36.47 3.02
694 2554 5.434408 TCATCATCTCAGAAATTGTGGGAG 58.566 41.667 0.00 0.00 0.00 4.30
698 2558 5.007332 TCGCATCATCATCTCAGAAATTGTG 59.993 40.000 0.00 0.00 0.00 3.33
706 2566 1.337917 CCCCTCGCATCATCATCTCAG 60.338 57.143 0.00 0.00 0.00 3.35
721 2581 4.200092 CCTTAATTGCTAACTGTCCCCTC 58.800 47.826 0.00 0.00 0.00 4.30
822 2983 4.858680 GCTCCGCTAGGCCCCAAC 62.859 72.222 0.00 0.00 37.47 3.77
863 3028 3.571741 GCGATACGAAGAGGGAAGG 57.428 57.895 0.00 0.00 0.00 3.46
1133 3335 1.878522 CGGGAAGGACGAATCGCAG 60.879 63.158 1.15 0.00 0.00 5.18
1339 3555 1.239968 GGAACACCTCCTTGCAGCAG 61.240 60.000 0.00 0.00 41.61 4.24
1401 3617 1.200020 GTGGCGAGCAAAACAATAGCT 59.800 47.619 0.00 0.00 42.17 3.32
1403 3619 1.465689 CCGTGGCGAGCAAAACAATAG 60.466 52.381 0.00 0.00 0.00 1.73
1454 3670 1.562575 CGTGGCGTGGTTAGTTGGTC 61.563 60.000 0.00 0.00 0.00 4.02
1455 3671 1.595929 CGTGGCGTGGTTAGTTGGT 60.596 57.895 0.00 0.00 0.00 3.67
1456 3672 2.322081 CCGTGGCGTGGTTAGTTGG 61.322 63.158 0.00 0.00 0.00 3.77
1457 3673 0.319727 TACCGTGGCGTGGTTAGTTG 60.320 55.000 5.75 0.00 40.96 3.16
1458 3674 0.319813 GTACCGTGGCGTGGTTAGTT 60.320 55.000 5.75 0.00 40.96 2.24
1459 3675 1.290009 GTACCGTGGCGTGGTTAGT 59.710 57.895 5.75 0.00 40.96 2.24
1460 3676 1.802715 CGTACCGTGGCGTGGTTAG 60.803 63.158 5.75 0.00 40.96 2.34
1461 3677 2.257980 CGTACCGTGGCGTGGTTA 59.742 61.111 5.75 0.00 40.96 2.85
1467 3683 4.485834 TAGCAGCGTACCGTGGCG 62.486 66.667 0.00 0.00 34.47 5.69
1468 3684 2.582498 CTAGCAGCGTACCGTGGC 60.582 66.667 0.00 0.00 0.00 5.01
1469 3685 0.452987 TAACTAGCAGCGTACCGTGG 59.547 55.000 0.00 0.00 0.00 4.94
1470 3686 2.486951 ATAACTAGCAGCGTACCGTG 57.513 50.000 0.00 0.00 0.00 4.94
1471 3687 2.165030 ACAATAACTAGCAGCGTACCGT 59.835 45.455 0.00 0.00 0.00 4.83
1472 3688 2.805845 ACAATAACTAGCAGCGTACCG 58.194 47.619 0.00 0.00 0.00 4.02
1473 3689 5.446875 GGAAAACAATAACTAGCAGCGTACC 60.447 44.000 0.00 0.00 0.00 3.34
1474 3690 5.350640 AGGAAAACAATAACTAGCAGCGTAC 59.649 40.000 0.00 0.00 0.00 3.67
1475 3691 5.484715 AGGAAAACAATAACTAGCAGCGTA 58.515 37.500 0.00 0.00 0.00 4.42
1476 3692 4.324267 AGGAAAACAATAACTAGCAGCGT 58.676 39.130 0.00 0.00 0.00 5.07
1477 3693 4.492570 CGAGGAAAACAATAACTAGCAGCG 60.493 45.833 0.00 0.00 0.00 5.18
1478 3694 4.728021 GCGAGGAAAACAATAACTAGCAGC 60.728 45.833 0.00 0.00 31.45 5.25
1479 3695 4.201822 GGCGAGGAAAACAATAACTAGCAG 60.202 45.833 0.00 0.00 32.50 4.24
1480 3696 3.687698 GGCGAGGAAAACAATAACTAGCA 59.312 43.478 0.00 0.00 32.50 3.49
1481 3697 3.687698 TGGCGAGGAAAACAATAACTAGC 59.312 43.478 0.00 0.00 0.00 3.42
1482 3698 4.201685 CGTGGCGAGGAAAACAATAACTAG 60.202 45.833 0.00 0.00 0.00 2.57
1483 3699 3.680937 CGTGGCGAGGAAAACAATAACTA 59.319 43.478 0.00 0.00 0.00 2.24
1484 3700 2.482721 CGTGGCGAGGAAAACAATAACT 59.517 45.455 0.00 0.00 0.00 2.24
1485 3701 2.413634 CCGTGGCGAGGAAAACAATAAC 60.414 50.000 0.00 0.00 0.00 1.89
1486 3702 1.807742 CCGTGGCGAGGAAAACAATAA 59.192 47.619 0.00 0.00 0.00 1.40
1487 3703 1.444836 CCGTGGCGAGGAAAACAATA 58.555 50.000 0.00 0.00 0.00 1.90
1488 3704 1.862602 GCCGTGGCGAGGAAAACAAT 61.863 55.000 0.00 0.00 0.00 2.71
1489 3705 2.548295 GCCGTGGCGAGGAAAACAA 61.548 57.895 0.00 0.00 0.00 2.83
1490 3706 2.975799 GCCGTGGCGAGGAAAACA 60.976 61.111 0.00 0.00 0.00 2.83
1491 3707 3.733960 GGCCGTGGCGAGGAAAAC 61.734 66.667 4.53 0.00 43.06 2.43
1500 3716 1.281656 GTAATTATGCGGCCGTGGC 59.718 57.895 28.70 11.02 41.06 5.01
1501 3717 1.837538 CGGTAATTATGCGGCCGTGG 61.838 60.000 28.70 0.00 37.87 4.94
1502 3718 1.567537 CGGTAATTATGCGGCCGTG 59.432 57.895 28.70 0.00 37.87 4.94
1503 3719 4.036977 CGGTAATTATGCGGCCGT 57.963 55.556 28.70 10.76 37.87 5.68
1504 3720 1.567537 CACGGTAATTATGCGGCCG 59.432 57.895 24.05 24.05 46.83 6.13
1505 3721 1.164041 AGCACGGTAATTATGCGGCC 61.164 55.000 0.00 0.00 44.25 6.13
1506 3722 0.234884 GAGCACGGTAATTATGCGGC 59.765 55.000 4.35 0.00 44.25 6.53
1507 3723 1.577468 TGAGCACGGTAATTATGCGG 58.423 50.000 4.35 0.00 44.25 5.69
1508 3724 2.157668 GGATGAGCACGGTAATTATGCG 59.842 50.000 4.35 0.00 44.25 4.73
1509 3725 3.138304 TGGATGAGCACGGTAATTATGC 58.862 45.455 1.96 1.96 39.74 3.14
1510 3726 4.756642 ACATGGATGAGCACGGTAATTATG 59.243 41.667 0.00 0.00 0.00 1.90
1511 3727 4.756642 CACATGGATGAGCACGGTAATTAT 59.243 41.667 0.00 0.00 0.00 1.28
1512 3728 4.126437 CACATGGATGAGCACGGTAATTA 58.874 43.478 0.00 0.00 0.00 1.40
1513 3729 2.945008 CACATGGATGAGCACGGTAATT 59.055 45.455 0.00 0.00 0.00 1.40
1514 3730 2.564771 CACATGGATGAGCACGGTAAT 58.435 47.619 0.00 0.00 0.00 1.89
1515 3731 1.406751 CCACATGGATGAGCACGGTAA 60.407 52.381 0.00 0.00 37.39 2.85
1516 3732 0.177836 CCACATGGATGAGCACGGTA 59.822 55.000 0.00 0.00 37.39 4.02
1517 3733 1.078214 CCACATGGATGAGCACGGT 60.078 57.895 0.00 0.00 37.39 4.83
1518 3734 1.820906 CCCACATGGATGAGCACGG 60.821 63.158 0.00 0.00 37.39 4.94
1519 3735 0.392863 TTCCCACATGGATGAGCACG 60.393 55.000 0.00 0.00 44.66 5.34
1520 3736 1.098050 GTTCCCACATGGATGAGCAC 58.902 55.000 0.00 0.00 44.66 4.40
1521 3737 0.034186 GGTTCCCACATGGATGAGCA 60.034 55.000 0.00 0.00 44.66 4.26
1522 3738 0.034186 TGGTTCCCACATGGATGAGC 60.034 55.000 0.00 0.00 44.66 4.26
1523 3739 2.094675 GTTGGTTCCCACATGGATGAG 58.905 52.381 0.00 0.00 44.66 2.90
1524 3740 1.710244 AGTTGGTTCCCACATGGATGA 59.290 47.619 0.00 0.00 44.66 2.92
1525 3741 2.094675 GAGTTGGTTCCCACATGGATG 58.905 52.381 0.00 0.00 44.66 3.51
1526 3742 1.710244 TGAGTTGGTTCCCACATGGAT 59.290 47.619 0.00 0.00 44.66 3.41
1527 3743 1.144691 TGAGTTGGTTCCCACATGGA 58.855 50.000 0.00 0.00 43.18 3.41
1528 3744 1.247567 GTGAGTTGGTTCCCACATGG 58.752 55.000 0.00 0.00 30.78 3.66
1529 3745 1.247567 GGTGAGTTGGTTCCCACATG 58.752 55.000 0.00 0.00 30.78 3.21
1530 3746 0.850100 TGGTGAGTTGGTTCCCACAT 59.150 50.000 0.00 0.00 30.78 3.21
1531 3747 0.850100 ATGGTGAGTTGGTTCCCACA 59.150 50.000 0.00 0.00 30.78 4.17
1532 3748 1.247567 CATGGTGAGTTGGTTCCCAC 58.752 55.000 0.00 0.00 30.78 4.61
1533 3749 0.112218 CCATGGTGAGTTGGTTCCCA 59.888 55.000 2.57 0.00 0.00 4.37
1534 3750 1.250840 GCCATGGTGAGTTGGTTCCC 61.251 60.000 14.67 0.00 35.34 3.97
1535 3751 1.250840 GGCCATGGTGAGTTGGTTCC 61.251 60.000 14.67 0.00 35.34 3.62
1536 3752 1.586154 CGGCCATGGTGAGTTGGTTC 61.586 60.000 14.67 0.00 35.34 3.62
1570 3786 6.220930 GTGAAACTGTACATGGAGTAAGTGA 58.779 40.000 0.00 0.00 33.72 3.41
1604 3820 9.348476 TGATAGTGCATTAGCCAATAATTGTTA 57.652 29.630 1.78 0.00 41.13 2.41
1616 3832 4.635765 TCAACAAGGTGATAGTGCATTAGC 59.364 41.667 0.00 0.00 42.57 3.09
1617 3833 6.317140 ACATCAACAAGGTGATAGTGCATTAG 59.683 38.462 0.00 0.00 36.04 1.73
1620 3836 4.592942 ACATCAACAAGGTGATAGTGCAT 58.407 39.130 0.00 0.00 36.04 3.96
1631 3847 6.089551 CACGAACTAACTCTACATCAACAAGG 59.910 42.308 0.00 0.00 0.00 3.61
1633 3849 5.404366 GCACGAACTAACTCTACATCAACAA 59.596 40.000 0.00 0.00 0.00 2.83
1635 3851 5.162075 AGCACGAACTAACTCTACATCAAC 58.838 41.667 0.00 0.00 0.00 3.18
1636 3852 5.386958 AGCACGAACTAACTCTACATCAA 57.613 39.130 0.00 0.00 0.00 2.57
1671 3910 0.267658 GGGGCCTTTATGGGGGATTT 59.732 55.000 0.84 0.00 36.00 2.17
1728 3967 1.668751 GACGAACCAACTCAACTTGCA 59.331 47.619 0.00 0.00 0.00 4.08
1729 3968 1.332904 CGACGAACCAACTCAACTTGC 60.333 52.381 0.00 0.00 0.00 4.01
1754 3993 6.436847 TCAAAATTTAGAGCCATGGTGATTCA 59.563 34.615 14.67 0.00 0.00 2.57
1859 4130 7.309805 GCACCCTGAAGATTTATTTTACCAGTT 60.310 37.037 0.00 0.00 0.00 3.16
2019 4295 7.398904 TCCCCCTTGGTCTAATTCTTTTATTTG 59.601 37.037 0.00 0.00 34.77 2.32
2092 4369 5.142639 ACATGGAACAAATATGATCCCTGG 58.857 41.667 12.49 0.00 45.43 4.45
2112 4390 2.958355 CGGAAAGATGGGGCAATTACAT 59.042 45.455 0.00 0.00 0.00 2.29
2147 4425 3.604130 CGAAATCGCGCCAAGAAAT 57.396 47.368 0.00 0.00 0.00 2.17
2249 4529 3.593096 CCCCACTTTAAGTTAGACGTCC 58.407 50.000 13.01 0.00 0.00 4.79
2338 4618 5.991606 CCATTTTTCAAAGGGAAAGAGAACC 59.008 40.000 0.00 0.00 45.70 3.62
2554 4834 6.458751 CCGGTCATTCAGAATTTATGAACCTG 60.459 42.308 8.52 5.10 39.36 4.00
2865 5145 4.621991 TCTCTGTCTGTAGCAAAAGACAC 58.378 43.478 10.31 0.00 45.97 3.67
2951 5231 8.831550 GGGTTAAGACTTTGCTTGATAAGATAG 58.168 37.037 0.00 0.00 0.00 2.08
3074 5354 4.022935 GCATTGTCATGAGTCTGGAACAAA 60.023 41.667 0.00 0.00 31.50 2.83
3165 5445 1.376037 GTTCCAGCAGGAGAACGGG 60.376 63.158 0.00 0.00 46.74 5.28
3223 5504 6.406849 GCTGTTTCCCATGATTATTAAGGCAA 60.407 38.462 0.00 0.00 0.00 4.52
3248 5529 2.296752 AGGCTCATGAGATCATCGTCAG 59.703 50.000 27.04 0.00 33.61 3.51
3256 5537 7.497249 ACTGTAAACAAATAGGCTCATGAGATC 59.503 37.037 27.04 16.42 0.00 2.75
3276 5557 6.952358 AGGACTAGATAGTGGACAAACTGTAA 59.048 38.462 0.00 0.00 36.50 2.41
3281 5562 6.602406 TGACTAGGACTAGATAGTGGACAAAC 59.398 42.308 13.00 0.00 36.50 2.93
3455 5749 9.255029 ACCCTATTTATTGCAGAACAAATAGTT 57.745 29.630 19.27 10.49 42.86 2.24
3498 5792 3.374988 CACACTGATGGTTATCACGCAAT 59.625 43.478 0.00 0.00 38.37 3.56
3612 5906 9.890629 AGATACTGCACAGAAAATTTCACTATA 57.109 29.630 8.55 0.00 0.00 1.31
3787 6082 6.092670 CAGAAGCAACATCGGAGAGATTTTTA 59.907 38.462 0.00 0.00 43.63 1.52
3790 6085 3.937706 CAGAAGCAACATCGGAGAGATTT 59.062 43.478 0.00 0.00 43.63 2.17
3791 6086 3.055530 ACAGAAGCAACATCGGAGAGATT 60.056 43.478 0.00 0.00 43.63 2.40
3792 6087 2.499289 ACAGAAGCAACATCGGAGAGAT 59.501 45.455 0.00 0.00 43.63 2.75
3793 6088 1.895798 ACAGAAGCAACATCGGAGAGA 59.104 47.619 0.00 0.00 43.63 3.10
3794 6089 2.376808 ACAGAAGCAACATCGGAGAG 57.623 50.000 0.00 0.00 43.63 3.20
3795 6090 2.224281 ACAACAGAAGCAACATCGGAGA 60.224 45.455 0.00 0.00 45.75 3.71
3797 6092 2.254546 ACAACAGAAGCAACATCGGA 57.745 45.000 0.00 0.00 0.00 4.55
3798 6093 3.498397 AGTTACAACAGAAGCAACATCGG 59.502 43.478 0.00 0.00 0.00 4.18
3799 6094 4.732285 AGTTACAACAGAAGCAACATCG 57.268 40.909 0.00 0.00 0.00 3.84
3866 6161 4.281941 ACTGTCATGTCAAGAGCTGTCTTA 59.718 41.667 0.00 0.00 41.40 2.10
4040 6335 5.620654 GCAACTCATTATTGAAGCAAGCTCA 60.621 40.000 0.00 0.00 0.00 4.26
4150 6445 4.486125 TGGCAATGTAAGCTATGTCTGA 57.514 40.909 0.00 0.00 0.00 3.27
4268 6563 1.613437 AGTGGCAGAAAATGGTTTCCG 59.387 47.619 0.00 0.00 43.65 4.30
4350 6645 1.843851 TCCAAACCGAATGAGCCCTAT 59.156 47.619 0.00 0.00 0.00 2.57
4351 6646 1.209504 CTCCAAACCGAATGAGCCCTA 59.790 52.381 0.00 0.00 0.00 3.53
4352 6647 0.035056 CTCCAAACCGAATGAGCCCT 60.035 55.000 0.00 0.00 0.00 5.19
4353 6648 1.032114 CCTCCAAACCGAATGAGCCC 61.032 60.000 0.00 0.00 0.00 5.19
4354 6649 0.035439 TCCTCCAAACCGAATGAGCC 60.035 55.000 0.00 0.00 0.00 4.70
4355 6650 2.044123 ATCCTCCAAACCGAATGAGC 57.956 50.000 0.00 0.00 0.00 4.26
4356 6651 4.009675 TGAAATCCTCCAAACCGAATGAG 58.990 43.478 0.00 0.00 0.00 2.90
4357 6652 4.027674 TGAAATCCTCCAAACCGAATGA 57.972 40.909 0.00 0.00 0.00 2.57
4358 6653 4.398988 TCATGAAATCCTCCAAACCGAATG 59.601 41.667 0.00 0.00 0.00 2.67
4359 6654 4.599041 TCATGAAATCCTCCAAACCGAAT 58.401 39.130 0.00 0.00 0.00 3.34
4360 6655 4.027674 TCATGAAATCCTCCAAACCGAA 57.972 40.909 0.00 0.00 0.00 4.30
4361 6656 3.712016 TCATGAAATCCTCCAAACCGA 57.288 42.857 0.00 0.00 0.00 4.69
4362 6657 3.696051 ACATCATGAAATCCTCCAAACCG 59.304 43.478 0.00 0.00 0.00 4.44
4363 6658 5.300286 CCTACATCATGAAATCCTCCAAACC 59.700 44.000 0.00 0.00 0.00 3.27
4364 6659 6.122277 TCCTACATCATGAAATCCTCCAAAC 58.878 40.000 0.00 0.00 0.00 2.93
4365 6660 6.325993 TCCTACATCATGAAATCCTCCAAA 57.674 37.500 0.00 0.00 0.00 3.28
4366 6661 5.974156 TCCTACATCATGAAATCCTCCAA 57.026 39.130 0.00 0.00 0.00 3.53
4367 6662 5.974156 TTCCTACATCATGAAATCCTCCA 57.026 39.130 0.00 0.00 0.00 3.86
4368 6663 8.378565 TCTAATTCCTACATCATGAAATCCTCC 58.621 37.037 0.00 0.00 0.00 4.30
4369 6664 9.784531 TTCTAATTCCTACATCATGAAATCCTC 57.215 33.333 0.00 0.00 0.00 3.71
4370 6665 9.566432 GTTCTAATTCCTACATCATGAAATCCT 57.434 33.333 0.00 0.00 0.00 3.24
4371 6666 9.566432 AGTTCTAATTCCTACATCATGAAATCC 57.434 33.333 0.00 0.00 0.00 3.01
4395 6690 9.892130 GCCATGCTATAAAATTCCTATACTAGT 57.108 33.333 0.00 0.00 0.00 2.57
4396 6691 9.890629 TGCCATGCTATAAAATTCCTATACTAG 57.109 33.333 0.00 0.00 0.00 2.57
4397 6692 9.667107 GTGCCATGCTATAAAATTCCTATACTA 57.333 33.333 0.00 0.00 0.00 1.82
4398 6693 8.386264 AGTGCCATGCTATAAAATTCCTATACT 58.614 33.333 0.00 0.00 0.00 2.12
4399 6694 8.567285 AGTGCCATGCTATAAAATTCCTATAC 57.433 34.615 0.00 0.00 0.00 1.47
4400 6695 9.013229 CAAGTGCCATGCTATAAAATTCCTATA 57.987 33.333 0.00 0.00 0.00 1.31
4401 6696 7.524367 GCAAGTGCCATGCTATAAAATTCCTAT 60.524 37.037 0.00 0.00 40.64 2.57
4402 6697 6.239008 GCAAGTGCCATGCTATAAAATTCCTA 60.239 38.462 0.00 0.00 40.64 2.94
4403 6698 5.452356 GCAAGTGCCATGCTATAAAATTCCT 60.452 40.000 0.00 0.00 40.64 3.36
4404 6699 4.746611 GCAAGTGCCATGCTATAAAATTCC 59.253 41.667 0.00 0.00 40.64 3.01
4405 6700 5.895216 GCAAGTGCCATGCTATAAAATTC 57.105 39.130 0.00 0.00 40.64 2.17
4420 6715 2.355010 ATCCTTAGGATGGCAAGTGC 57.645 50.000 13.71 0.00 41.43 4.40
4421 6716 4.096984 GTCAAATCCTTAGGATGGCAAGTG 59.903 45.833 15.28 6.73 42.27 3.16
4422 6717 4.018050 AGTCAAATCCTTAGGATGGCAAGT 60.018 41.667 15.28 1.60 42.27 3.16
4423 6718 4.530875 AGTCAAATCCTTAGGATGGCAAG 58.469 43.478 15.28 3.75 42.27 4.01
4424 6719 4.526970 GAGTCAAATCCTTAGGATGGCAA 58.473 43.478 15.28 0.00 42.27 4.52
4425 6720 3.432186 CGAGTCAAATCCTTAGGATGGCA 60.432 47.826 15.28 0.00 42.27 4.92
4426 6721 3.134458 CGAGTCAAATCCTTAGGATGGC 58.866 50.000 15.28 6.44 42.27 4.40
4427 6722 3.134458 GCGAGTCAAATCCTTAGGATGG 58.866 50.000 15.28 10.38 42.27 3.51
4428 6723 3.134458 GGCGAGTCAAATCCTTAGGATG 58.866 50.000 15.28 4.96 42.27 3.51
4429 6724 3.041946 AGGCGAGTCAAATCCTTAGGAT 58.958 45.455 8.15 8.15 45.46 3.24
4430 6725 2.431057 GAGGCGAGTCAAATCCTTAGGA 59.569 50.000 2.37 2.37 35.55 2.94
4431 6726 2.799917 CGAGGCGAGTCAAATCCTTAGG 60.800 54.545 0.00 0.00 0.00 2.69
4432 6727 2.159226 ACGAGGCGAGTCAAATCCTTAG 60.159 50.000 0.00 0.00 0.00 2.18
4433 6728 1.822990 ACGAGGCGAGTCAAATCCTTA 59.177 47.619 0.00 0.00 0.00 2.69
4434 6729 0.608640 ACGAGGCGAGTCAAATCCTT 59.391 50.000 0.00 0.00 0.00 3.36
4435 6730 0.608640 AACGAGGCGAGTCAAATCCT 59.391 50.000 0.00 0.00 0.00 3.24
4436 6731 1.000145 GAACGAGGCGAGTCAAATCC 59.000 55.000 0.00 0.00 0.00 3.01
4437 6732 1.000145 GGAACGAGGCGAGTCAAATC 59.000 55.000 0.00 0.00 0.00 2.17
4438 6733 0.608640 AGGAACGAGGCGAGTCAAAT 59.391 50.000 0.00 0.00 0.00 2.32
4439 6734 1.068055 GTAGGAACGAGGCGAGTCAAA 60.068 52.381 0.00 0.00 0.00 2.69
4440 6735 0.524862 GTAGGAACGAGGCGAGTCAA 59.475 55.000 0.00 0.00 0.00 3.18
4441 6736 2.177950 GTAGGAACGAGGCGAGTCA 58.822 57.895 0.00 0.00 0.00 3.41
4452 6747 2.928116 AGCTCATTTTACGCGTAGGAAC 59.072 45.455 19.61 10.91 0.00 3.62
4453 6748 3.241067 AGCTCATTTTACGCGTAGGAA 57.759 42.857 19.61 17.60 0.00 3.36
4454 6749 2.953466 AGCTCATTTTACGCGTAGGA 57.047 45.000 19.61 12.24 0.00 2.94
4455 6750 3.369756 TCAAAGCTCATTTTACGCGTAGG 59.630 43.478 19.61 10.54 0.00 3.18
4456 6751 4.091509 ACTCAAAGCTCATTTTACGCGTAG 59.908 41.667 19.61 9.64 0.00 3.51
4457 6752 3.991773 ACTCAAAGCTCATTTTACGCGTA 59.008 39.130 16.41 16.41 0.00 4.42
4458 6753 2.806244 ACTCAAAGCTCATTTTACGCGT 59.194 40.909 19.17 19.17 0.00 6.01
4459 6754 3.155998 CACTCAAAGCTCATTTTACGCG 58.844 45.455 3.53 3.53 0.00 6.01
4460 6755 3.188460 TCCACTCAAAGCTCATTTTACGC 59.812 43.478 0.00 0.00 0.00 4.42
4461 6756 5.106555 ACATCCACTCAAAGCTCATTTTACG 60.107 40.000 0.00 0.00 0.00 3.18
4462 6757 6.088824 CACATCCACTCAAAGCTCATTTTAC 58.911 40.000 0.00 0.00 0.00 2.01
4463 6758 5.769662 ACACATCCACTCAAAGCTCATTTTA 59.230 36.000 0.00 0.00 0.00 1.52
4464 6759 4.586001 ACACATCCACTCAAAGCTCATTTT 59.414 37.500 0.00 0.00 0.00 1.82
4465 6760 4.147321 ACACATCCACTCAAAGCTCATTT 58.853 39.130 0.00 0.00 0.00 2.32
4466 6761 3.759581 ACACATCCACTCAAAGCTCATT 58.240 40.909 0.00 0.00 0.00 2.57
4467 6762 3.430042 ACACATCCACTCAAAGCTCAT 57.570 42.857 0.00 0.00 0.00 2.90
4468 6763 2.936919 ACACATCCACTCAAAGCTCA 57.063 45.000 0.00 0.00 0.00 4.26
4469 6764 5.886960 AATTACACATCCACTCAAAGCTC 57.113 39.130 0.00 0.00 0.00 4.09
4470 6765 5.183904 GGAAATTACACATCCACTCAAAGCT 59.816 40.000 0.00 0.00 33.30 3.74
4471 6766 5.183904 AGGAAATTACACATCCACTCAAAGC 59.816 40.000 0.00 0.00 35.62 3.51
4472 6767 6.127897 GGAGGAAATTACACATCCACTCAAAG 60.128 42.308 0.00 0.00 37.02 2.77
4473 6768 5.710099 GGAGGAAATTACACATCCACTCAAA 59.290 40.000 0.00 0.00 37.02 2.69
4474 6769 5.222027 TGGAGGAAATTACACATCCACTCAA 60.222 40.000 8.71 0.00 41.07 3.02
4475 6770 4.288366 TGGAGGAAATTACACATCCACTCA 59.712 41.667 8.71 0.00 41.07 3.41
4476 6771 4.843728 TGGAGGAAATTACACATCCACTC 58.156 43.478 8.71 0.00 41.07 3.51
4477 6772 4.927267 TGGAGGAAATTACACATCCACT 57.073 40.909 8.71 0.00 41.07 4.00
4478 6773 5.975693 TTTGGAGGAAATTACACATCCAC 57.024 39.130 11.27 0.00 44.61 4.02
4479 6774 6.325028 TGTTTTTGGAGGAAATTACACATCCA 59.675 34.615 8.71 8.71 43.55 3.41
4480 6775 6.754193 TGTTTTTGGAGGAAATTACACATCC 58.246 36.000 0.00 0.00 37.47 3.51
4481 6776 7.657336 TCTGTTTTTGGAGGAAATTACACATC 58.343 34.615 0.00 0.00 0.00 3.06
4482 6777 7.595819 TCTGTTTTTGGAGGAAATTACACAT 57.404 32.000 0.00 0.00 0.00 3.21
4483 6778 7.038154 CTCTGTTTTTGGAGGAAATTACACA 57.962 36.000 0.00 0.00 0.00 3.72
4494 6789 8.115490 ACTATTCATTTCCTCTGTTTTTGGAG 57.885 34.615 0.00 0.00 0.00 3.86
4495 6790 9.753674 ATACTATTCATTTCCTCTGTTTTTGGA 57.246 29.630 0.00 0.00 0.00 3.53
4499 6794 9.981460 AGGAATACTATTCATTTCCTCTGTTTT 57.019 29.630 10.37 0.00 43.45 2.43
4502 6797 8.361139 CGTAGGAATACTATTCATTTCCTCTGT 58.639 37.037 10.37 0.00 43.45 3.41
4503 6798 8.577296 TCGTAGGAATACTATTCATTTCCTCTG 58.423 37.037 10.37 1.98 43.45 3.35
4504 6799 8.707796 TCGTAGGAATACTATTCATTTCCTCT 57.292 34.615 10.37 0.63 43.45 3.69
4517 6812 9.128404 TGTGTACAGAAATATCGTAGGAATACT 57.872 33.333 0.00 0.00 0.00 2.12
4518 6813 9.909644 ATGTGTACAGAAATATCGTAGGAATAC 57.090 33.333 0.00 0.00 0.00 1.89
4520 6815 9.832445 AAATGTGTACAGAAATATCGTAGGAAT 57.168 29.630 0.00 0.00 0.00 3.01
4521 6816 9.309516 GAAATGTGTACAGAAATATCGTAGGAA 57.690 33.333 0.00 0.00 0.00 3.36
4522 6817 7.924412 GGAAATGTGTACAGAAATATCGTAGGA 59.076 37.037 0.00 0.00 0.00 2.94
4523 6818 7.926555 AGGAAATGTGTACAGAAATATCGTAGG 59.073 37.037 0.00 0.00 0.00 3.18
4524 6819 8.873215 AGGAAATGTGTACAGAAATATCGTAG 57.127 34.615 0.00 0.00 0.00 3.51
4525 6820 9.740239 GTAGGAAATGTGTACAGAAATATCGTA 57.260 33.333 0.00 0.00 0.00 3.43
4526 6821 8.255206 TGTAGGAAATGTGTACAGAAATATCGT 58.745 33.333 0.00 0.00 0.00 3.73
4527 6822 8.642908 TGTAGGAAATGTGTACAGAAATATCG 57.357 34.615 0.00 0.00 0.00 2.92
4530 6825 9.005777 GGTTTGTAGGAAATGTGTACAGAAATA 57.994 33.333 0.00 0.00 0.00 1.40
4531 6826 7.308348 CGGTTTGTAGGAAATGTGTACAGAAAT 60.308 37.037 0.00 0.00 0.00 2.17
4532 6827 6.017770 CGGTTTGTAGGAAATGTGTACAGAAA 60.018 38.462 0.00 0.00 0.00 2.52
4533 6828 5.467399 CGGTTTGTAGGAAATGTGTACAGAA 59.533 40.000 0.00 0.00 0.00 3.02
4534 6829 4.992319 CGGTTTGTAGGAAATGTGTACAGA 59.008 41.667 0.00 0.00 0.00 3.41
4535 6830 4.992319 TCGGTTTGTAGGAAATGTGTACAG 59.008 41.667 0.00 0.00 0.00 2.74
4536 6831 4.958509 TCGGTTTGTAGGAAATGTGTACA 58.041 39.130 0.00 0.00 0.00 2.90
4537 6832 5.927954 TTCGGTTTGTAGGAAATGTGTAC 57.072 39.130 0.00 0.00 0.00 2.90
4538 6833 5.106475 GCATTCGGTTTGTAGGAAATGTGTA 60.106 40.000 0.00 0.00 0.00 2.90
4539 6834 4.320935 GCATTCGGTTTGTAGGAAATGTGT 60.321 41.667 0.00 0.00 0.00 3.72
4540 6835 4.165779 GCATTCGGTTTGTAGGAAATGTG 58.834 43.478 0.00 0.00 0.00 3.21
4541 6836 3.823873 TGCATTCGGTTTGTAGGAAATGT 59.176 39.130 0.00 0.00 0.00 2.71
4542 6837 4.433186 TGCATTCGGTTTGTAGGAAATG 57.567 40.909 0.00 0.00 0.00 2.32
4543 6838 4.949856 AGATGCATTCGGTTTGTAGGAAAT 59.050 37.500 0.00 0.00 0.00 2.17
4544 6839 4.331968 AGATGCATTCGGTTTGTAGGAAA 58.668 39.130 0.00 0.00 0.00 3.13
4545 6840 3.950397 AGATGCATTCGGTTTGTAGGAA 58.050 40.909 0.00 0.00 0.00 3.36
4546 6841 3.627395 AGATGCATTCGGTTTGTAGGA 57.373 42.857 0.00 0.00 0.00 2.94
4547 6842 5.639506 CCTATAGATGCATTCGGTTTGTAGG 59.360 44.000 0.00 1.63 0.00 3.18
4548 6843 6.455647 TCCTATAGATGCATTCGGTTTGTAG 58.544 40.000 0.00 0.00 0.00 2.74
4549 6844 6.413783 TCCTATAGATGCATTCGGTTTGTA 57.586 37.500 0.00 0.00 0.00 2.41
4550 6845 5.290493 TCCTATAGATGCATTCGGTTTGT 57.710 39.130 0.00 0.00 0.00 2.83
4551 6846 6.618287 TTTCCTATAGATGCATTCGGTTTG 57.382 37.500 0.00 0.00 0.00 2.93
4552 6847 7.823745 AATTTCCTATAGATGCATTCGGTTT 57.176 32.000 0.00 0.00 0.00 3.27
4553 6848 7.823745 AAATTTCCTATAGATGCATTCGGTT 57.176 32.000 0.00 0.00 0.00 4.44
4554 6849 7.040409 GGAAAATTTCCTATAGATGCATTCGGT 60.040 37.037 17.01 0.00 46.57 4.69
4555 6850 7.308435 GGAAAATTTCCTATAGATGCATTCGG 58.692 38.462 17.01 0.00 46.57 4.30
4570 6865 5.481824 ACAAGGATTCCAGAGGAAAATTTCC 59.518 40.000 16.59 16.59 45.41 3.13
4571 6866 6.596309 ACAAGGATTCCAGAGGAAAATTTC 57.404 37.500 5.29 0.00 45.41 2.17
4572 6867 6.014242 GGAACAAGGATTCCAGAGGAAAATTT 60.014 38.462 5.29 0.00 45.41 1.82
4573 6868 5.481824 GGAACAAGGATTCCAGAGGAAAATT 59.518 40.000 5.29 0.00 45.41 1.82
4574 6869 5.019470 GGAACAAGGATTCCAGAGGAAAAT 58.981 41.667 5.29 0.00 45.41 1.82
4575 6870 4.407365 GGAACAAGGATTCCAGAGGAAAA 58.593 43.478 5.29 0.00 45.41 2.29
4576 6871 4.034285 GGAACAAGGATTCCAGAGGAAA 57.966 45.455 5.29 0.00 45.41 3.13
4577 6872 3.721087 GGAACAAGGATTCCAGAGGAA 57.279 47.619 5.29 0.30 46.49 3.36
4585 6880 5.946377 AGGAAACACATAGGAACAAGGATTC 59.054 40.000 0.00 0.00 0.00 2.52
4586 6881 5.892348 AGGAAACACATAGGAACAAGGATT 58.108 37.500 0.00 0.00 0.00 3.01
4587 6882 5.520748 AGGAAACACATAGGAACAAGGAT 57.479 39.130 0.00 0.00 0.00 3.24
4588 6883 4.993705 AGGAAACACATAGGAACAAGGA 57.006 40.909 0.00 0.00 0.00 3.36
4589 6884 6.414732 TCATAGGAAACACATAGGAACAAGG 58.585 40.000 0.00 0.00 0.00 3.61
4590 6885 7.921786 TTCATAGGAAACACATAGGAACAAG 57.078 36.000 0.00 0.00 32.21 3.16
4591 6886 8.698973 TTTTCATAGGAAACACATAGGAACAA 57.301 30.769 1.27 0.00 42.48 2.83
4592 6887 8.877864 ATTTTCATAGGAAACACATAGGAACA 57.122 30.769 1.27 0.00 42.48 3.18
4593 6888 8.406297 GGATTTTCATAGGAAACACATAGGAAC 58.594 37.037 1.27 0.00 42.48 3.62
4594 6889 8.336235 AGGATTTTCATAGGAAACACATAGGAA 58.664 33.333 1.27 0.00 42.48 3.36
4595 6890 7.872138 AGGATTTTCATAGGAAACACATAGGA 58.128 34.615 1.27 0.00 42.48 2.94
4596 6891 7.229506 GGAGGATTTTCATAGGAAACACATAGG 59.770 40.741 1.27 0.00 42.48 2.57
4597 6892 7.775093 TGGAGGATTTTCATAGGAAACACATAG 59.225 37.037 1.27 0.00 42.48 2.23
4598 6893 7.638444 TGGAGGATTTTCATAGGAAACACATA 58.362 34.615 1.27 0.00 42.48 2.29
4599 6894 6.493166 TGGAGGATTTTCATAGGAAACACAT 58.507 36.000 1.27 0.00 42.48 3.21
4600 6895 5.886609 TGGAGGATTTTCATAGGAAACACA 58.113 37.500 1.27 0.00 42.48 3.72
4601 6896 6.834168 TTGGAGGATTTTCATAGGAAACAC 57.166 37.500 1.27 0.00 42.48 3.32
4602 6897 6.210584 GGTTTGGAGGATTTTCATAGGAAACA 59.789 38.462 1.27 0.00 42.48 2.83
4603 6898 6.625081 CGGTTTGGAGGATTTTCATAGGAAAC 60.625 42.308 1.27 0.00 42.48 2.78
4604 6899 5.417580 CGGTTTGGAGGATTTTCATAGGAAA 59.582 40.000 0.00 0.00 41.13 3.13
4605 6900 4.947388 CGGTTTGGAGGATTTTCATAGGAA 59.053 41.667 0.00 0.00 0.00 3.36
4606 6901 4.226394 TCGGTTTGGAGGATTTTCATAGGA 59.774 41.667 0.00 0.00 0.00 2.94
4607 6902 4.523083 TCGGTTTGGAGGATTTTCATAGG 58.477 43.478 0.00 0.00 0.00 2.57
4608 6903 6.699575 ATTCGGTTTGGAGGATTTTCATAG 57.300 37.500 0.00 0.00 0.00 2.23
4609 6904 6.770785 CCTATTCGGTTTGGAGGATTTTCATA 59.229 38.462 0.00 0.00 0.00 2.15
4610 6905 5.594317 CCTATTCGGTTTGGAGGATTTTCAT 59.406 40.000 0.00 0.00 0.00 2.57
4611 6906 4.947388 CCTATTCGGTTTGGAGGATTTTCA 59.053 41.667 0.00 0.00 0.00 2.69
4612 6907 4.202020 GCCTATTCGGTTTGGAGGATTTTC 60.202 45.833 0.00 0.00 34.25 2.29
4613 6908 3.699538 GCCTATTCGGTTTGGAGGATTTT 59.300 43.478 0.00 0.00 34.25 1.82
4614 6909 3.288092 GCCTATTCGGTTTGGAGGATTT 58.712 45.455 0.00 0.00 34.25 2.17
4615 6910 2.422945 GGCCTATTCGGTTTGGAGGATT 60.423 50.000 0.00 0.00 34.25 3.01
4616 6911 1.143073 GGCCTATTCGGTTTGGAGGAT 59.857 52.381 0.00 0.00 34.25 3.24
4617 6912 0.544697 GGCCTATTCGGTTTGGAGGA 59.455 55.000 0.00 0.00 34.25 3.71
4618 6913 0.465642 GGGCCTATTCGGTTTGGAGG 60.466 60.000 0.84 0.00 34.25 4.30
4619 6914 0.254747 TGGGCCTATTCGGTTTGGAG 59.745 55.000 4.53 0.00 34.25 3.86
4620 6915 0.923358 ATGGGCCTATTCGGTTTGGA 59.077 50.000 4.53 0.00 34.25 3.53
4621 6916 2.649531 TATGGGCCTATTCGGTTTGG 57.350 50.000 7.02 0.00 34.25 3.28
4622 6917 3.888930 ACAATATGGGCCTATTCGGTTTG 59.111 43.478 7.02 6.85 34.25 2.93
4623 6918 3.888930 CACAATATGGGCCTATTCGGTTT 59.111 43.478 7.02 0.00 34.25 3.27
4624 6919 3.117663 ACACAATATGGGCCTATTCGGTT 60.118 43.478 7.02 0.00 34.25 4.44
4625 6920 2.441750 ACACAATATGGGCCTATTCGGT 59.558 45.455 7.02 0.00 34.25 4.69
4626 6921 3.140325 ACACAATATGGGCCTATTCGG 57.860 47.619 7.02 0.00 0.00 4.30
4627 6922 5.514274 AAAACACAATATGGGCCTATTCG 57.486 39.130 7.02 0.00 0.00 3.34
4628 6923 6.872920 TCAAAAACACAATATGGGCCTATTC 58.127 36.000 7.02 0.00 0.00 1.75
4629 6924 6.865834 TCAAAAACACAATATGGGCCTATT 57.134 33.333 7.02 0.00 0.00 1.73
4630 6925 6.840705 AGATCAAAAACACAATATGGGCCTAT 59.159 34.615 6.88 6.88 0.00 2.57
4631 6926 6.194235 AGATCAAAAACACAATATGGGCCTA 58.806 36.000 4.53 0.00 0.00 3.93
4632 6927 5.025453 AGATCAAAAACACAATATGGGCCT 58.975 37.500 4.53 0.00 0.00 5.19
4633 6928 5.343307 AGATCAAAAACACAATATGGGCC 57.657 39.130 0.00 0.00 0.00 5.80
4634 6929 7.864379 CAGATAGATCAAAAACACAATATGGGC 59.136 37.037 0.00 0.00 0.00 5.36
4635 6930 9.123902 TCAGATAGATCAAAAACACAATATGGG 57.876 33.333 0.00 0.00 0.00 4.00
4713 7008 6.607004 ATTTAGGAACGGAGGGACTATATG 57.393 41.667 0.00 0.00 41.55 1.78
4719 7014 6.661304 TCTTATATTTAGGAACGGAGGGAC 57.339 41.667 0.00 0.00 0.00 4.46
4774 7069 3.296322 TGTTCACCAATTTCAATCCGC 57.704 42.857 0.00 0.00 0.00 5.54
4786 7081 5.047448 CCCATTTTGATGTGTATGTTCACCA 60.047 40.000 0.00 0.00 37.51 4.17
4802 7097 9.520204 GATTCACATGTATCTAAACCCATTTTG 57.480 33.333 0.00 0.00 0.00 2.44
4885 7340 3.948473 TGTTAGCCTGACTCAGCTACTAG 59.052 47.826 0.00 0.00 0.00 2.57
4892 7347 1.620819 ACCACTGTTAGCCTGACTCAG 59.379 52.381 0.00 0.00 0.00 3.35
4912 7367 5.298026 GGAAATTTTAGCACAAGGGCAAAAA 59.702 36.000 0.00 0.00 35.83 1.94
4913 7368 4.819088 GGAAATTTTAGCACAAGGGCAAAA 59.181 37.500 0.00 2.46 35.83 2.44
4931 7386 3.181455 GCAAAGAACCCAAACCTGGAAAT 60.181 43.478 0.00 0.00 46.92 2.17
5169 7628 4.346129 GCGAAACAATGCTTCTTCTATGG 58.654 43.478 0.00 0.00 0.00 2.74
5363 7826 2.438434 GGGCTTCATCCACGGTGG 60.438 66.667 21.27 21.27 39.43 4.61
5419 7885 3.701040 ACACAATTCCCATGGATTACAGC 59.299 43.478 15.22 0.00 0.00 4.40
5518 7984 1.035139 AACACAGCAGGCTCAAAAGG 58.965 50.000 0.00 0.00 0.00 3.11
5528 7994 1.392589 ACCAAACCTCAACACAGCAG 58.607 50.000 0.00 0.00 0.00 4.24
5556 8022 9.720874 AGGATATCAGGATGCATACTAGAATAA 57.279 33.333 12.19 3.14 34.76 1.40
5558 8024 7.622878 ACAGGATATCAGGATGCATACTAGAAT 59.377 37.037 12.19 8.36 34.76 2.40
5567 8033 5.096521 AGGAATACAGGATATCAGGATGCA 58.903 41.667 4.83 0.00 34.76 3.96
5568 8034 5.690464 AGGAATACAGGATATCAGGATGC 57.310 43.478 4.83 0.00 34.76 3.91
5569 8035 7.609532 GGAAAAGGAATACAGGATATCAGGATG 59.390 40.741 4.83 0.39 37.54 3.51
5571 8037 6.619437 TGGAAAAGGAATACAGGATATCAGGA 59.381 38.462 4.83 0.00 0.00 3.86
5573 8039 7.094463 GCATGGAAAAGGAATACAGGATATCAG 60.094 40.741 4.83 0.00 0.00 2.90
5575 8041 6.944862 AGCATGGAAAAGGAATACAGGATATC 59.055 38.462 0.00 0.00 0.00 1.63
5576 8042 6.856757 AGCATGGAAAAGGAATACAGGATAT 58.143 36.000 0.00 0.00 0.00 1.63
5590 8144 5.287674 TGGAAAATGACAAGCATGGAAAA 57.712 34.783 0.00 0.00 37.28 2.29
5591 8145 4.952071 TGGAAAATGACAAGCATGGAAA 57.048 36.364 0.00 0.00 37.28 3.13
5592 8146 4.081531 GGATGGAAAATGACAAGCATGGAA 60.082 41.667 0.00 0.00 37.28 3.53
5610 8165 1.890876 TTTGTTGTCACGGAGGATGG 58.109 50.000 0.00 0.00 0.00 3.51
5699 9180 3.624861 CCATCCTTTCATCTTCACCTTCG 59.375 47.826 0.00 0.00 0.00 3.79
5721 9202 6.201615 TGTCTATCATCACTCAAATGAATCGC 59.798 38.462 0.00 0.00 36.75 4.58
5819 9302 4.286297 TCCTTCATCCTTGAACGACATT 57.714 40.909 0.00 0.00 36.94 2.71
5907 9393 5.174037 TGTTGATTACCTGGAACCCTAAG 57.826 43.478 0.00 0.00 0.00 2.18
5949 9435 9.920946 TCTTATTCCTTGGCTCTTTATTATTGT 57.079 29.630 0.00 0.00 0.00 2.71
5989 9476 4.666253 GCCAGCCTTGAGGTGCCA 62.666 66.667 0.00 0.00 42.90 4.92
6068 9555 6.201234 GGGAGTACTCGATTCTTATTCTTTGC 59.799 42.308 16.56 0.00 0.00 3.68
6077 9564 2.299521 CGGAGGGAGTACTCGATTCTT 58.700 52.381 16.56 0.00 38.39 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.