Multiple sequence alignment - TraesCS5A01G093600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G093600 chr5A 100.000 6294 0 0 1 6294 130088608 130082315 0.000000e+00 11623.0
1 TraesCS5A01G093600 chr5A 79.009 686 124 20 2855 3530 666233031 666232356 9.620000e-123 451.0
2 TraesCS5A01G093600 chr5D 93.035 3101 112 41 2048 5101 119709860 119706817 0.000000e+00 4434.0
3 TraesCS5A01G093600 chr5D 88.738 1030 84 12 5269 6294 119680405 119679404 0.000000e+00 1230.0
4 TraesCS5A01G093600 chr5D 94.136 648 33 2 1282 1924 119710552 119709905 0.000000e+00 981.0
5 TraesCS5A01G093600 chr5D 87.640 445 49 6 5339 5779 120783547 120783105 4.350000e-141 512.0
6 TraesCS5A01G093600 chr5D 86.047 344 18 7 865 1203 119710922 119710604 6.040000e-90 342.0
7 TraesCS5A01G093600 chr5B 91.343 3165 155 59 2003 5101 132604055 132600944 0.000000e+00 4217.0
8 TraesCS5A01G093600 chr5B 92.447 662 28 6 1282 1924 132604761 132604103 0.000000e+00 926.0
9 TraesCS5A01G093600 chr5B 93.047 489 32 1 5698 6184 132600107 132599619 0.000000e+00 713.0
10 TraesCS5A01G093600 chr5B 88.161 473 55 1 5224 5696 132600842 132600371 4.260000e-156 562.0
11 TraesCS5A01G093600 chr5B 82.530 498 36 25 372 829 132606076 132605590 2.130000e-104 390.0
12 TraesCS5A01G093600 chr5B 86.047 387 25 18 824 1202 132605176 132604811 7.650000e-104 388.0
13 TraesCS5A01G093600 chr5B 96.682 211 7 0 1 211 132606466 132606256 1.000000e-92 351.0
14 TraesCS5A01G093600 chr5B 93.220 118 8 0 6177 6294 132599058 132598941 2.330000e-39 174.0
15 TraesCS5A01G093600 chr5B 95.238 42 2 0 5097 5138 132600903 132600862 4.070000e-07 67.6
16 TraesCS5A01G093600 chr6D 88.315 445 45 7 5339 5779 82143454 82143895 1.550000e-145 527.0
17 TraesCS5A01G093600 chr6D 88.036 443 47 6 5341 5779 389704934 389705374 2.600000e-143 520.0
18 TraesCS5A01G093600 chr6D 85.315 143 21 0 5191 5333 161145484 161145626 1.410000e-31 148.0
19 TraesCS5A01G093600 chr7D 88.117 446 45 8 5338 5779 60368231 60368672 2.010000e-144 523.0
20 TraesCS5A01G093600 chr7D 85.816 141 18 2 5200 5339 530031123 530031262 1.410000e-31 148.0
21 TraesCS5A01G093600 chr7D 84.211 152 22 2 5189 5339 588710602 588710452 5.080000e-31 147.0
22 TraesCS5A01G093600 chr6B 87.585 443 45 10 5341 5779 41922596 41923032 7.280000e-139 505.0
23 TraesCS5A01G093600 chr6B 86.486 148 19 1 5193 5339 101243443 101243296 1.820000e-35 161.0
24 TraesCS5A01G093600 chr3D 87.082 449 50 8 5335 5779 570542402 570541958 9.420000e-138 501.0
25 TraesCS5A01G093600 chr1A 87.082 449 50 6 5336 5779 539708775 539709220 9.420000e-138 501.0
26 TraesCS5A01G093600 chr4D 79.185 687 121 21 2855 3530 485387177 485386502 2.070000e-124 457.0
27 TraesCS5A01G093600 chr4B 77.697 686 133 19 2855 3530 618593607 618592932 9.830000e-108 401.0
28 TraesCS5A01G093600 chr2D 91.803 244 15 2 1681 1924 11373714 11373952 1.010000e-87 335.0
29 TraesCS5A01G093600 chr2D 91.795 195 16 0 2001 2195 11373995 11374189 8.040000e-69 272.0
30 TraesCS5A01G093600 chr1D 77.290 524 103 16 2888 3403 382921586 382922101 1.720000e-75 294.0
31 TraesCS5A01G093600 chr1B 76.181 529 100 24 2888 3403 513161325 513161840 8.100000e-64 255.0
32 TraesCS5A01G093600 chr1B 85.811 148 19 2 5193 5339 384652144 384651998 8.450000e-34 156.0
33 TraesCS5A01G093600 chr1B 84.177 158 22 2 5185 5339 678909945 678910102 3.930000e-32 150.0
34 TraesCS5A01G093600 chr3A 81.231 325 34 20 2334 2639 596694041 596693725 2.930000e-58 237.0
35 TraesCS5A01G093600 chr3A 89.831 59 6 0 2574 2632 509426213 509426155 6.770000e-10 76.8
36 TraesCS5A01G093600 chr7B 91.503 153 13 0 2481 2633 619928437 619928285 1.780000e-50 211.0
37 TraesCS5A01G093600 chr7B 83.333 150 23 2 5191 5339 674586326 674586178 3.060000e-28 137.0
38 TraesCS5A01G093600 chr3B 87.692 130 16 0 5210 5339 244229538 244229667 1.090000e-32 152.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G093600 chr5A 130082315 130088608 6293 True 11623.0 11623 100.000000 1 6294 1 chr5A.!!$R1 6293
1 TraesCS5A01G093600 chr5A 666232356 666233031 675 True 451.0 451 79.009000 2855 3530 1 chr5A.!!$R2 675
2 TraesCS5A01G093600 chr5D 119706817 119710922 4105 True 1919.0 4434 91.072667 865 5101 3 chr5D.!!$R3 4236
3 TraesCS5A01G093600 chr5D 119679404 119680405 1001 True 1230.0 1230 88.738000 5269 6294 1 chr5D.!!$R1 1025
4 TraesCS5A01G093600 chr5B 132598941 132606466 7525 True 865.4 4217 90.968333 1 6294 9 chr5B.!!$R1 6293
5 TraesCS5A01G093600 chr4D 485386502 485387177 675 True 457.0 457 79.185000 2855 3530 1 chr4D.!!$R1 675
6 TraesCS5A01G093600 chr4B 618592932 618593607 675 True 401.0 401 77.697000 2855 3530 1 chr4B.!!$R1 675
7 TraesCS5A01G093600 chr1D 382921586 382922101 515 False 294.0 294 77.290000 2888 3403 1 chr1D.!!$F1 515
8 TraesCS5A01G093600 chr1B 513161325 513161840 515 False 255.0 255 76.181000 2888 3403 1 chr1B.!!$F1 515

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
743 843 0.035439 GGTGGGTGCTTAGCTGCTTA 60.035 55.0 7.79 0.0 0.00 3.09 F
1943 2523 0.040603 GCTCACTCACTTGCAGTTGC 60.041 55.0 0.00 0.0 42.50 4.17 F
3285 3963 0.108138 AGCCGATGAAGCGCTACTTT 60.108 50.0 12.05 0.0 39.29 2.66 F
4166 4853 0.464373 CAGATATGCAGGCCACCGTT 60.464 55.0 5.01 0.0 0.00 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1955 2535 0.465824 ATGGATGAGGAGCAAGCTGC 60.466 55.0 5.35 5.35 45.46 5.25 R
3721 4399 0.461961 CCACCTTCTCGATCCTCACC 59.538 60.0 0.00 0.00 0.00 4.02 R
4182 4869 0.038310 TGAAGTCGGCTCTCAGGAGA 59.962 55.0 0.00 0.00 41.86 3.71 R
5447 6206 0.040958 CTTTGCCAGACTGTTCGTGC 60.041 55.0 0.93 0.00 0.00 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 6.641169 TGGTGCAAAATTATGTACACTGAA 57.359 33.333 0.00 0.00 37.62 3.02
93 94 4.974645 TGTTGTTCTTGGAGAGTATGGT 57.025 40.909 0.00 0.00 0.00 3.55
129 130 3.382865 TGAAGAGGCACACTAGATGCTAG 59.617 47.826 18.75 0.00 42.93 3.42
138 139 4.803088 CACACTAGATGCTAGCAAGAGTTC 59.197 45.833 23.54 14.33 0.00 3.01
149 150 5.391416 GCTAGCAAGAGTTCTCCAAATGTTC 60.391 44.000 10.63 0.00 0.00 3.18
186 187 8.923609 ATCGACAAAGATGCATATATGACTAG 57.076 34.615 17.10 10.02 0.00 2.57
211 212 5.760253 AGTAAGCTAATTATCAATGCGCAGT 59.240 36.000 18.32 11.60 0.00 4.40
213 214 5.505173 AGCTAATTATCAATGCGCAGTTT 57.495 34.783 18.32 6.60 0.00 2.66
214 215 5.894807 AGCTAATTATCAATGCGCAGTTTT 58.105 33.333 18.32 1.68 0.00 2.43
215 216 5.745294 AGCTAATTATCAATGCGCAGTTTTG 59.255 36.000 18.32 16.13 0.00 2.44
216 217 5.051508 GCTAATTATCAATGCGCAGTTTTGG 60.052 40.000 18.32 0.49 0.00 3.28
219 220 5.574891 TTATCAATGCGCAGTTTTGGTAT 57.425 34.783 18.32 8.72 0.00 2.73
220 221 3.485947 TCAATGCGCAGTTTTGGTATC 57.514 42.857 18.32 0.00 0.00 2.24
221 222 2.816672 TCAATGCGCAGTTTTGGTATCA 59.183 40.909 18.32 0.00 0.00 2.15
222 223 2.916716 CAATGCGCAGTTTTGGTATCAC 59.083 45.455 18.32 0.00 0.00 3.06
223 224 1.598882 TGCGCAGTTTTGGTATCACA 58.401 45.000 5.66 0.00 0.00 3.58
225 226 1.804151 GCGCAGTTTTGGTATCACAGA 59.196 47.619 0.30 0.00 0.00 3.41
227 228 3.621268 GCGCAGTTTTGGTATCACAGATA 59.379 43.478 0.30 0.00 0.00 1.98
228 229 4.094294 GCGCAGTTTTGGTATCACAGATAA 59.906 41.667 0.30 0.00 0.00 1.75
229 230 5.560148 CGCAGTTTTGGTATCACAGATAAC 58.440 41.667 0.00 0.00 0.00 1.89
231 232 5.447279 GCAGTTTTGGTATCACAGATAACGG 60.447 44.000 0.00 0.00 0.00 4.44
233 234 5.873164 AGTTTTGGTATCACAGATAACGGAC 59.127 40.000 0.00 0.00 0.00 4.79
234 235 5.408880 TTTGGTATCACAGATAACGGACA 57.591 39.130 0.00 0.00 0.00 4.02
237 238 4.647399 TGGTATCACAGATAACGGACATGA 59.353 41.667 0.00 0.00 0.00 3.07
238 239 5.128008 TGGTATCACAGATAACGGACATGAA 59.872 40.000 0.00 0.00 0.00 2.57
240 241 6.201044 GGTATCACAGATAACGGACATGAAAG 59.799 42.308 0.00 0.00 0.00 2.62
241 242 3.932710 TCACAGATAACGGACATGAAAGC 59.067 43.478 0.00 0.00 0.00 3.51
242 243 3.935203 CACAGATAACGGACATGAAAGCT 59.065 43.478 0.00 0.00 0.00 3.74
243 244 5.105513 TCACAGATAACGGACATGAAAGCTA 60.106 40.000 0.00 0.00 0.00 3.32
244 245 5.580691 CACAGATAACGGACATGAAAGCTAA 59.419 40.000 0.00 0.00 0.00 3.09
245 246 6.258727 CACAGATAACGGACATGAAAGCTAAT 59.741 38.462 0.00 0.00 0.00 1.73
246 247 6.258727 ACAGATAACGGACATGAAAGCTAATG 59.741 38.462 0.00 0.00 0.00 1.90
247 248 5.760253 AGATAACGGACATGAAAGCTAATGG 59.240 40.000 0.00 0.00 0.00 3.16
248 249 2.017049 ACGGACATGAAAGCTAATGGC 58.983 47.619 0.00 5.37 42.19 4.40
249 250 2.016318 CGGACATGAAAGCTAATGGCA 58.984 47.619 0.00 0.00 44.79 4.92
250 251 2.620115 CGGACATGAAAGCTAATGGCAT 59.380 45.455 0.00 0.00 44.79 4.40
251 252 3.549423 CGGACATGAAAGCTAATGGCATG 60.549 47.826 0.00 10.78 44.79 4.06
253 254 4.357142 GACATGAAAGCTAATGGCATGTG 58.643 43.478 18.37 0.00 46.63 3.21
254 255 3.131577 ACATGAAAGCTAATGGCATGTGG 59.868 43.478 14.82 0.00 45.40 4.17
255 256 2.101783 TGAAAGCTAATGGCATGTGGG 58.898 47.619 0.00 0.00 44.79 4.61
256 257 1.410153 GAAAGCTAATGGCATGTGGGG 59.590 52.381 0.00 0.00 44.79 4.96
262 263 3.667217 ATGGCATGTGGGGGAGCAC 62.667 63.158 0.00 0.00 0.00 4.40
266 267 3.402681 ATGTGGGGGAGCACGGAG 61.403 66.667 0.00 0.00 0.00 4.63
280 281 2.169832 ACGGAGTGACTGGAAACATG 57.830 50.000 0.00 0.00 42.51 3.21
281 282 1.270839 ACGGAGTGACTGGAAACATGG 60.271 52.381 0.00 0.00 42.51 3.66
282 283 1.168714 GGAGTGACTGGAAACATGGC 58.831 55.000 0.00 0.00 41.51 4.40
296 297 2.111384 ACATGGCAAGTCTCGGTAGAT 58.889 47.619 0.00 0.00 33.30 1.98
297 298 2.159043 ACATGGCAAGTCTCGGTAGATG 60.159 50.000 0.00 0.00 33.30 2.90
298 299 0.824109 TGGCAAGTCTCGGTAGATGG 59.176 55.000 0.00 0.00 33.30 3.51
299 300 0.824759 GGCAAGTCTCGGTAGATGGT 59.175 55.000 0.00 0.00 33.30 3.55
300 301 1.207329 GGCAAGTCTCGGTAGATGGTT 59.793 52.381 0.00 0.00 33.30 3.67
301 302 2.354805 GGCAAGTCTCGGTAGATGGTTT 60.355 50.000 0.00 0.00 33.30 3.27
302 303 3.118884 GGCAAGTCTCGGTAGATGGTTTA 60.119 47.826 0.00 0.00 33.30 2.01
303 304 3.864003 GCAAGTCTCGGTAGATGGTTTAC 59.136 47.826 0.00 0.00 33.30 2.01
304 305 4.619863 GCAAGTCTCGGTAGATGGTTTACA 60.620 45.833 0.00 0.00 33.30 2.41
305 306 5.661458 CAAGTCTCGGTAGATGGTTTACAT 58.339 41.667 0.00 0.00 44.18 2.29
306 307 6.682113 GCAAGTCTCGGTAGATGGTTTACATA 60.682 42.308 0.00 0.00 40.72 2.29
307 308 7.262772 CAAGTCTCGGTAGATGGTTTACATAA 58.737 38.462 0.00 0.00 40.72 1.90
308 309 7.414222 AGTCTCGGTAGATGGTTTACATAAA 57.586 36.000 0.00 0.00 40.72 1.40
309 310 7.490000 AGTCTCGGTAGATGGTTTACATAAAG 58.510 38.462 0.00 0.00 40.72 1.85
310 311 7.341256 AGTCTCGGTAGATGGTTTACATAAAGA 59.659 37.037 0.00 0.00 40.72 2.52
311 312 7.648510 GTCTCGGTAGATGGTTTACATAAAGAG 59.351 40.741 0.00 0.00 40.72 2.85
312 313 6.278363 TCGGTAGATGGTTTACATAAAGAGC 58.722 40.000 0.00 0.00 40.72 4.09
313 314 6.046593 CGGTAGATGGTTTACATAAAGAGCA 58.953 40.000 0.00 0.00 40.72 4.26
314 315 6.706270 CGGTAGATGGTTTACATAAAGAGCAT 59.294 38.462 0.00 0.00 40.72 3.79
315 316 7.307396 CGGTAGATGGTTTACATAAAGAGCATG 60.307 40.741 0.00 0.00 40.72 4.06
316 317 7.499232 GGTAGATGGTTTACATAAAGAGCATGT 59.501 37.037 0.00 0.00 40.72 3.21
317 318 7.325660 AGATGGTTTACATAAAGAGCATGTG 57.674 36.000 0.00 0.00 40.72 3.21
318 319 7.112122 AGATGGTTTACATAAAGAGCATGTGA 58.888 34.615 0.00 0.00 40.72 3.58
319 320 6.741992 TGGTTTACATAAAGAGCATGTGAG 57.258 37.500 0.00 0.00 37.22 3.51
320 321 5.647658 TGGTTTACATAAAGAGCATGTGAGG 59.352 40.000 0.00 0.00 37.22 3.86
344 345 4.994852 TGGTGTTAAGTGCAGAGATGTTAC 59.005 41.667 0.00 0.00 0.00 2.50
347 348 6.531948 GGTGTTAAGTGCAGAGATGTTACTAG 59.468 42.308 0.00 0.00 0.00 2.57
348 349 7.091443 GTGTTAAGTGCAGAGATGTTACTAGT 58.909 38.462 0.00 0.00 0.00 2.57
349 350 8.242053 GTGTTAAGTGCAGAGATGTTACTAGTA 58.758 37.037 0.00 0.00 0.00 1.82
350 351 8.242053 TGTTAAGTGCAGAGATGTTACTAGTAC 58.758 37.037 0.91 0.00 0.00 2.73
351 352 6.835819 AAGTGCAGAGATGTTACTAGTACA 57.164 37.500 0.91 4.98 0.00 2.90
353 354 7.411486 AGTGCAGAGATGTTACTAGTACATT 57.589 36.000 0.91 2.22 36.41 2.71
355 356 7.340743 AGTGCAGAGATGTTACTAGTACATTCT 59.659 37.037 0.91 4.87 36.41 2.40
357 358 8.531982 TGCAGAGATGTTACTAGTACATTCTTT 58.468 33.333 0.91 0.00 36.41 2.52
403 465 8.669243 AGACTAAAAGTTGAACAAGAGAAGTTG 58.331 33.333 0.00 0.00 0.00 3.16
414 476 2.867624 AGAGAAGTTGGCATTTGCTGA 58.132 42.857 2.12 0.00 41.70 4.26
436 498 7.466590 GCTGAGCAGGTAGATCATTAGTTTTTC 60.467 40.741 0.00 0.00 42.62 2.29
447 511 9.634021 AGATCATTAGTTTTTCTCCCTAAATCC 57.366 33.333 0.00 0.00 0.00 3.01
458 522 3.194620 TCCCTAAATCCTGCCCTACAAA 58.805 45.455 0.00 0.00 0.00 2.83
482 546 5.647225 ACTTTCTGGCTTTCAAAATTTTGCA 59.353 32.000 23.36 12.31 38.05 4.08
483 547 5.738118 TTCTGGCTTTCAAAATTTTGCAG 57.262 34.783 23.36 21.73 38.05 4.41
484 548 3.560896 TCTGGCTTTCAAAATTTTGCAGC 59.439 39.130 29.21 29.21 40.52 5.25
486 550 3.946558 TGGCTTTCAAAATTTTGCAGCTT 59.053 34.783 32.19 3.43 40.80 3.74
487 551 5.121811 TGGCTTTCAAAATTTTGCAGCTTA 58.878 33.333 32.19 24.82 40.80 3.09
488 552 5.764192 TGGCTTTCAAAATTTTGCAGCTTAT 59.236 32.000 32.19 2.21 40.80 1.73
520 605 0.609131 TTGCCCTTCCTTGCTACAGC 60.609 55.000 0.00 0.00 42.50 4.40
532 617 2.232239 GCTACAGCAAATCACACACG 57.768 50.000 0.00 0.00 41.59 4.49
585 670 8.825667 AACGTAGGTCTAAAATAACGGTAAAA 57.174 30.769 0.00 0.00 34.81 1.52
587 672 8.925700 ACGTAGGTCTAAAATAACGGTAAAAAG 58.074 33.333 0.00 0.00 34.81 2.27
589 674 7.149569 AGGTCTAAAATAACGGTAAAAAGGC 57.850 36.000 0.00 0.00 0.00 4.35
590 675 6.716173 AGGTCTAAAATAACGGTAAAAAGGCA 59.284 34.615 0.00 0.00 0.00 4.75
591 676 7.231115 AGGTCTAAAATAACGGTAAAAAGGCAA 59.769 33.333 0.00 0.00 0.00 4.52
592 677 7.326789 GGTCTAAAATAACGGTAAAAAGGCAAC 59.673 37.037 0.00 0.00 0.00 4.17
593 678 7.326789 GTCTAAAATAACGGTAAAAAGGCAACC 59.673 37.037 0.00 0.00 37.17 3.77
594 679 5.532664 AAATAACGGTAAAAAGGCAACCA 57.467 34.783 0.00 0.00 32.55 3.67
600 685 2.224185 GGTAAAAAGGCAACCAACCAGG 60.224 50.000 0.00 0.00 45.67 4.45
691 791 1.003223 GGTTCCGTTGTTTCCTTGTCG 60.003 52.381 0.00 0.00 0.00 4.35
736 836 4.796495 GCGGGGGTGGGTGCTTAG 62.796 72.222 0.00 0.00 0.00 2.18
737 837 4.796495 CGGGGGTGGGTGCTTAGC 62.796 72.222 0.00 0.00 0.00 3.09
738 838 3.339093 GGGGGTGGGTGCTTAGCT 61.339 66.667 5.60 0.00 0.00 3.32
739 839 2.044946 GGGGTGGGTGCTTAGCTG 60.045 66.667 5.60 0.00 0.00 4.24
741 841 2.352805 GGTGGGTGCTTAGCTGCT 59.647 61.111 7.57 7.57 0.00 4.24
742 842 1.303643 GGTGGGTGCTTAGCTGCTT 60.304 57.895 7.79 0.00 0.00 3.91
743 843 0.035439 GGTGGGTGCTTAGCTGCTTA 60.035 55.000 7.79 0.00 0.00 3.09
744 844 1.408822 GGTGGGTGCTTAGCTGCTTAT 60.409 52.381 7.79 0.00 0.00 1.73
761 861 2.629424 TATGCCCATCCAGCTGTGCC 62.629 60.000 13.81 0.17 0.00 5.01
762 862 4.437587 GCCCATCCAGCTGTGCCT 62.438 66.667 13.81 0.00 0.00 4.75
763 863 2.439701 CCCATCCAGCTGTGCCTG 60.440 66.667 13.81 4.16 0.00 4.85
764 864 2.353958 CCATCCAGCTGTGCCTGT 59.646 61.111 13.81 0.00 0.00 4.00
765 865 2.044555 CCATCCAGCTGTGCCTGTG 61.045 63.158 13.81 2.00 0.00 3.66
766 866 2.360852 ATCCAGCTGTGCCTGTGC 60.361 61.111 13.81 0.00 38.26 4.57
769 869 2.281276 CAGCTGTGCCTGTGCTCA 60.281 61.111 5.25 0.00 38.57 4.26
772 872 0.538977 AGCTGTGCCTGTGCTCAAAT 60.539 50.000 0.00 0.00 40.20 2.32
773 873 0.316204 GCTGTGCCTGTGCTCAAATT 59.684 50.000 0.00 0.00 40.20 1.82
774 874 1.668047 GCTGTGCCTGTGCTCAAATTC 60.668 52.381 0.00 0.00 40.20 2.17
803 911 3.446161 CCCTCGTCACTTGGACTTGTATA 59.554 47.826 0.00 0.00 44.68 1.47
807 915 6.032956 TCGTCACTTGGACTTGTATAATGT 57.967 37.500 0.00 0.00 44.68 2.71
815 923 8.742777 ACTTGGACTTGTATAATGTTCTACGTA 58.257 33.333 0.00 0.00 0.00 3.57
844 1370 2.776312 TGGTAGCGAGAATCTAAGCG 57.224 50.000 4.89 0.00 34.34 4.68
934 1462 1.100510 AGCCTAACATGCATGCACAG 58.899 50.000 25.37 20.82 0.00 3.66
935 1463 0.101759 GCCTAACATGCATGCACAGG 59.898 55.000 25.37 26.38 0.00 4.00
941 1469 1.379443 ATGCATGCACAGGTCCTGG 60.379 57.895 25.37 12.64 35.51 4.45
956 1484 2.554893 GTCCTGGACGGCATTGTTAAAA 59.445 45.455 11.71 0.00 0.00 1.52
957 1485 3.192633 GTCCTGGACGGCATTGTTAAAAT 59.807 43.478 11.71 0.00 0.00 1.82
959 1487 5.010933 TCCTGGACGGCATTGTTAAAATAA 58.989 37.500 0.00 0.00 0.00 1.40
966 1497 6.279882 ACGGCATTGTTAAAATAATGGATGG 58.720 36.000 12.31 0.00 37.79 3.51
1047 1585 3.331478 AGCCATCAGAGTTGAGTTGAG 57.669 47.619 0.00 0.00 36.61 3.02
1048 1586 2.636893 AGCCATCAGAGTTGAGTTGAGT 59.363 45.455 0.00 0.00 36.61 3.41
1049 1587 3.072184 AGCCATCAGAGTTGAGTTGAGTT 59.928 43.478 0.00 0.00 36.61 3.01
1050 1588 3.188048 GCCATCAGAGTTGAGTTGAGTTG 59.812 47.826 0.00 0.00 36.61 3.16
1051 1589 4.635223 CCATCAGAGTTGAGTTGAGTTGA 58.365 43.478 0.00 0.00 36.61 3.18
1052 1590 4.689812 CCATCAGAGTTGAGTTGAGTTGAG 59.310 45.833 0.00 0.00 36.61 3.02
1053 1591 5.295950 CATCAGAGTTGAGTTGAGTTGAGT 58.704 41.667 0.00 0.00 36.61 3.41
1054 1592 5.344743 TCAGAGTTGAGTTGAGTTGAGTT 57.655 39.130 0.00 0.00 0.00 3.01
1055 1593 5.111989 TCAGAGTTGAGTTGAGTTGAGTTG 58.888 41.667 0.00 0.00 0.00 3.16
1056 1594 5.105351 TCAGAGTTGAGTTGAGTTGAGTTGA 60.105 40.000 0.00 0.00 0.00 3.18
1057 1595 5.233902 CAGAGTTGAGTTGAGTTGAGTTGAG 59.766 44.000 0.00 0.00 0.00 3.02
1058 1596 5.091261 AGTTGAGTTGAGTTGAGTTGAGT 57.909 39.130 0.00 0.00 0.00 3.41
1059 1597 5.491982 AGTTGAGTTGAGTTGAGTTGAGTT 58.508 37.500 0.00 0.00 0.00 3.01
1060 1598 5.352569 AGTTGAGTTGAGTTGAGTTGAGTTG 59.647 40.000 0.00 0.00 0.00 3.16
1061 1599 5.084818 TGAGTTGAGTTGAGTTGAGTTGA 57.915 39.130 0.00 0.00 0.00 3.18
1062 1600 5.111989 TGAGTTGAGTTGAGTTGAGTTGAG 58.888 41.667 0.00 0.00 0.00 3.02
1063 1601 5.091261 AGTTGAGTTGAGTTGAGTTGAGT 57.909 39.130 0.00 0.00 0.00 3.41
1064 1602 5.112686 AGTTGAGTTGAGTTGAGTTGAGTC 58.887 41.667 0.00 0.00 0.00 3.36
1065 1603 3.706698 TGAGTTGAGTTGAGTTGAGTCG 58.293 45.455 0.00 0.00 0.00 4.18
1066 1604 3.380320 TGAGTTGAGTTGAGTTGAGTCGA 59.620 43.478 0.00 0.00 0.00 4.20
1096 1634 2.590092 GGCGCCCACTGTATTCCT 59.410 61.111 18.11 0.00 0.00 3.36
1196 1736 3.128068 AGACGGACACAAAAACCTTCAAC 59.872 43.478 0.00 0.00 0.00 3.18
1203 1743 5.348164 ACACAAAAACCTTCAACATGCTAC 58.652 37.500 0.00 0.00 0.00 3.58
1204 1744 4.744631 CACAAAAACCTTCAACATGCTACC 59.255 41.667 0.00 0.00 0.00 3.18
1205 1745 4.404073 ACAAAAACCTTCAACATGCTACCA 59.596 37.500 0.00 0.00 0.00 3.25
1206 1746 4.584327 AAAACCTTCAACATGCTACCAC 57.416 40.909 0.00 0.00 0.00 4.16
1207 1747 3.508845 AACCTTCAACATGCTACCACT 57.491 42.857 0.00 0.00 0.00 4.00
1208 1748 3.508845 ACCTTCAACATGCTACCACTT 57.491 42.857 0.00 0.00 0.00 3.16
1209 1749 3.149196 ACCTTCAACATGCTACCACTTG 58.851 45.455 0.00 0.00 0.00 3.16
1210 1750 3.181445 ACCTTCAACATGCTACCACTTGA 60.181 43.478 0.00 0.00 0.00 3.02
1211 1751 4.012374 CCTTCAACATGCTACCACTTGAT 58.988 43.478 0.00 0.00 0.00 2.57
1212 1752 4.142534 CCTTCAACATGCTACCACTTGATG 60.143 45.833 0.00 0.00 0.00 3.07
1225 1765 5.240713 CCACTTGATGGCTAAGAAACATC 57.759 43.478 0.00 0.00 43.24 3.06
1226 1766 4.701651 CCACTTGATGGCTAAGAAACATCA 59.298 41.667 0.00 0.00 46.49 3.07
1230 1770 5.643379 TGATGGCTAAGAAACATCAAACC 57.357 39.130 4.29 0.00 45.55 3.27
1231 1771 5.324409 TGATGGCTAAGAAACATCAAACCT 58.676 37.500 4.29 0.00 45.55 3.50
1232 1772 5.183713 TGATGGCTAAGAAACATCAAACCTG 59.816 40.000 4.29 0.00 45.55 4.00
1233 1773 4.724399 TGGCTAAGAAACATCAAACCTGA 58.276 39.130 0.00 0.00 35.56 3.86
1234 1774 5.136828 TGGCTAAGAAACATCAAACCTGAA 58.863 37.500 0.00 0.00 34.49 3.02
1235 1775 5.241506 TGGCTAAGAAACATCAAACCTGAAG 59.758 40.000 0.00 0.00 34.49 3.02
1236 1776 5.241728 GGCTAAGAAACATCAAACCTGAAGT 59.758 40.000 0.00 0.00 35.03 3.01
1237 1777 6.374578 GCTAAGAAACATCAAACCTGAAGTC 58.625 40.000 0.00 0.00 32.42 3.01
1238 1778 6.205658 GCTAAGAAACATCAAACCTGAAGTCT 59.794 38.462 0.00 0.00 32.42 3.24
1239 1779 6.625873 AAGAAACATCAAACCTGAAGTCTC 57.374 37.500 0.00 0.00 32.42 3.36
1240 1780 5.934781 AGAAACATCAAACCTGAAGTCTCT 58.065 37.500 0.00 0.00 32.42 3.10
1241 1781 5.762218 AGAAACATCAAACCTGAAGTCTCTG 59.238 40.000 0.00 0.00 31.12 3.35
1242 1782 4.013267 ACATCAAACCTGAAGTCTCTGG 57.987 45.455 0.00 0.00 44.32 3.86
1248 1788 2.638556 CCTGAAGTCTCTGGTGTACG 57.361 55.000 0.00 0.00 36.24 3.67
1249 1789 1.402984 CCTGAAGTCTCTGGTGTACGC 60.403 57.143 0.00 0.00 36.24 4.42
1250 1790 1.269723 CTGAAGTCTCTGGTGTACGCA 59.730 52.381 8.97 0.00 0.00 5.24
1251 1791 1.000607 TGAAGTCTCTGGTGTACGCAC 60.001 52.381 8.97 0.00 44.53 5.34
1277 1817 2.046285 CCGTGCCCTCACCAAATCC 61.046 63.158 0.00 0.00 40.04 3.01
1306 1866 7.936584 ACTACTGTTTGCATCTCTCTCTATAC 58.063 38.462 0.00 0.00 0.00 1.47
1313 1873 5.639139 TGCATCTCTCTCTATACATGTCCT 58.361 41.667 0.00 0.00 0.00 3.85
1316 1876 5.053978 TCTCTCTCTATACATGTCCTGCA 57.946 43.478 0.00 0.00 0.00 4.41
1328 1888 1.881973 TGTCCTGCACATTCTTGCTTC 59.118 47.619 0.00 0.00 43.41 3.86
1330 1890 1.074405 TCCTGCACATTCTTGCTTCCT 59.926 47.619 0.00 0.00 43.41 3.36
1343 1903 2.672098 TGCTTCCTTGGCTACCAAAAA 58.328 42.857 0.03 0.00 43.44 1.94
1378 1943 3.619487 GCTCTGCTTCCATTCTTCAGACT 60.619 47.826 0.00 0.00 31.36 3.24
1403 1969 2.856032 CAGCTGTTTCTGGACGCG 59.144 61.111 3.53 3.53 0.00 6.01
1406 1972 3.777925 CTGTTTCTGGACGCGGCG 61.778 66.667 22.36 22.36 0.00 6.46
1920 2500 1.083806 TGCATTGGTAAGCTCGCTCG 61.084 55.000 0.00 0.00 0.00 5.03
1921 2501 1.638467 CATTGGTAAGCTCGCTCGC 59.362 57.895 0.00 0.00 0.00 5.03
1922 2502 0.807667 CATTGGTAAGCTCGCTCGCT 60.808 55.000 0.00 0.00 43.31 4.93
1923 2503 0.528684 ATTGGTAAGCTCGCTCGCTC 60.529 55.000 0.00 0.00 39.86 5.03
1924 2504 2.652496 GGTAAGCTCGCTCGCTCG 60.652 66.667 0.00 0.00 39.86 5.03
1925 2505 3.316278 GTAAGCTCGCTCGCTCGC 61.316 66.667 0.00 0.00 39.86 5.03
1926 2506 3.509757 TAAGCTCGCTCGCTCGCT 61.510 61.111 0.00 0.00 39.86 4.93
1927 2507 3.456431 TAAGCTCGCTCGCTCGCTC 62.456 63.158 0.00 0.00 39.86 5.03
1930 2510 4.172772 CTCGCTCGCTCGCTCACT 62.173 66.667 0.00 0.00 0.00 3.41
1931 2511 4.167359 TCGCTCGCTCGCTCACTC 62.167 66.667 0.00 0.00 0.00 3.51
1932 2512 4.467062 CGCTCGCTCGCTCACTCA 62.467 66.667 0.00 0.00 0.00 3.41
1933 2513 2.878520 GCTCGCTCGCTCACTCAC 60.879 66.667 0.00 0.00 0.00 3.51
1934 2514 2.874019 CTCGCTCGCTCACTCACT 59.126 61.111 0.00 0.00 0.00 3.41
1935 2515 1.211449 CTCGCTCGCTCACTCACTT 59.789 57.895 0.00 0.00 0.00 3.16
1936 2516 1.069924 CTCGCTCGCTCACTCACTTG 61.070 60.000 0.00 0.00 0.00 3.16
1937 2517 2.724708 CGCTCGCTCACTCACTTGC 61.725 63.158 0.00 0.00 0.00 4.01
1938 2518 1.665916 GCTCGCTCACTCACTTGCA 60.666 57.895 0.00 0.00 0.00 4.08
1939 2519 1.624865 GCTCGCTCACTCACTTGCAG 61.625 60.000 0.00 0.00 0.00 4.41
1940 2520 0.319383 CTCGCTCACTCACTTGCAGT 60.319 55.000 0.00 0.00 0.00 4.40
1941 2521 0.104855 TCGCTCACTCACTTGCAGTT 59.895 50.000 0.00 0.00 0.00 3.16
1942 2522 0.234106 CGCTCACTCACTTGCAGTTG 59.766 55.000 0.00 0.00 0.00 3.16
1943 2523 0.040603 GCTCACTCACTTGCAGTTGC 60.041 55.000 0.00 0.00 42.50 4.17
1989 2569 1.996292 TCCATTTCTCTGAAGCGTCG 58.004 50.000 0.00 0.00 0.00 5.12
1990 2570 1.272490 TCCATTTCTCTGAAGCGTCGT 59.728 47.619 0.00 0.00 0.00 4.34
1991 2571 1.656095 CCATTTCTCTGAAGCGTCGTC 59.344 52.381 0.00 0.00 0.00 4.20
2025 2622 1.262950 TGAATTTTCGGTCAGTGTGCG 59.737 47.619 0.00 0.00 0.00 5.34
2087 2684 2.058705 TGTGTTGTAGGGATGGTTGGA 58.941 47.619 0.00 0.00 0.00 3.53
2096 2693 0.837272 GGATGGTTGGATCGGAGGAA 59.163 55.000 0.00 0.00 0.00 3.36
2198 2795 1.109920 TCTGGGAGCAGCTATCCGAC 61.110 60.000 10.27 0.21 37.75 4.79
2254 2851 4.688879 TGACATGTACGTCTCCAATCAAAC 59.311 41.667 0.00 0.00 36.82 2.93
2266 2863 2.027285 CCAATCAAACCCAATCCCCAAC 60.027 50.000 0.00 0.00 0.00 3.77
2315 2912 5.010516 TGTGGACCAAATTTGACATTTCGAT 59.989 36.000 19.86 0.00 0.00 3.59
2330 2927 9.986833 TGACATTTCGATATTAAGTTTGATGTG 57.013 29.630 0.00 0.00 0.00 3.21
2375 2974 1.748493 TGTTGCAGGGTTGACAAGAAC 59.252 47.619 0.00 0.00 0.00 3.01
2433 3032 6.545298 AGAGGTGAGAAATGAGCAAAATATCC 59.455 38.462 0.00 0.00 0.00 2.59
2436 3035 6.096001 GGTGAGAAATGAGCAAAATATCCAGT 59.904 38.462 0.00 0.00 0.00 4.00
2438 3037 5.899299 AGAAATGAGCAAAATATCCAGTGC 58.101 37.500 0.00 0.00 37.26 4.40
2439 3038 5.419788 AGAAATGAGCAAAATATCCAGTGCA 59.580 36.000 0.00 0.00 39.50 4.57
2440 3039 4.913335 ATGAGCAAAATATCCAGTGCAG 57.087 40.909 0.00 0.00 39.50 4.41
2442 3041 3.691118 TGAGCAAAATATCCAGTGCAGTC 59.309 43.478 0.00 0.00 39.50 3.51
2443 3042 3.689347 AGCAAAATATCCAGTGCAGTCA 58.311 40.909 0.00 0.00 39.50 3.41
2444 3043 3.441572 AGCAAAATATCCAGTGCAGTCAC 59.558 43.478 0.00 0.00 43.44 3.67
2455 3054 2.470821 GTGCAGTCACGAGTAACTTGT 58.529 47.619 0.00 0.00 32.98 3.16
2456 3055 2.864343 GTGCAGTCACGAGTAACTTGTT 59.136 45.455 0.00 0.00 32.98 2.83
2457 3056 3.308866 GTGCAGTCACGAGTAACTTGTTT 59.691 43.478 0.00 0.00 32.98 2.83
2458 3057 3.308595 TGCAGTCACGAGTAACTTGTTTG 59.691 43.478 0.00 0.00 0.00 2.93
2459 3058 3.308866 GCAGTCACGAGTAACTTGTTTGT 59.691 43.478 0.00 0.00 0.00 2.83
2460 3059 4.201783 GCAGTCACGAGTAACTTGTTTGTT 60.202 41.667 0.00 0.00 0.00 2.83
2461 3060 5.672819 GCAGTCACGAGTAACTTGTTTGTTT 60.673 40.000 0.00 0.00 0.00 2.83
2462 3061 5.732647 CAGTCACGAGTAACTTGTTTGTTTG 59.267 40.000 0.00 0.00 0.00 2.93
2463 3062 5.410439 AGTCACGAGTAACTTGTTTGTTTGT 59.590 36.000 0.00 0.00 0.00 2.83
2464 3063 6.591062 AGTCACGAGTAACTTGTTTGTTTGTA 59.409 34.615 0.00 0.00 0.00 2.41
2465 3064 6.679919 GTCACGAGTAACTTGTTTGTTTGTAC 59.320 38.462 0.00 0.00 0.00 2.90
2466 3065 6.368243 TCACGAGTAACTTGTTTGTTTGTACA 59.632 34.615 0.00 0.00 0.00 2.90
2467 3066 6.681178 CACGAGTAACTTGTTTGTTTGTACAG 59.319 38.462 0.00 0.00 35.28 2.74
2468 3067 6.369615 ACGAGTAACTTGTTTGTTTGTACAGT 59.630 34.615 0.00 0.00 35.28 3.55
2469 3068 7.545265 ACGAGTAACTTGTTTGTTTGTACAGTA 59.455 33.333 0.00 0.00 35.28 2.74
2470 3069 8.382130 CGAGTAACTTGTTTGTTTGTACAGTAA 58.618 33.333 0.00 0.00 35.28 2.24
2536 3174 1.680651 CCTCACTCTGACGGCCTCT 60.681 63.158 0.00 0.00 0.00 3.69
2539 3177 2.601666 ACTCTGACGGCCTCTGCA 60.602 61.111 0.00 0.00 40.13 4.41
2633 3271 3.417601 TCGGCTACATCGAGGTCG 58.582 61.111 5.75 4.52 41.45 4.79
2664 3314 1.960689 CCTTCCGTGGAATTGGTTGTT 59.039 47.619 1.02 0.00 33.28 2.83
2678 3328 3.462021 TGGTTGTTAAATTGTTGGCAGC 58.538 40.909 0.00 0.00 0.00 5.25
2688 3342 0.181114 TGTTGGCAGCTCACTCTTGT 59.819 50.000 2.28 0.00 0.00 3.16
2709 3370 2.492088 TCAGTGATACCGACAACTCCAG 59.508 50.000 0.00 0.00 0.00 3.86
2719 3380 3.551454 CCGACAACTCCAGTTTCGTCTTA 60.551 47.826 16.07 0.00 37.12 2.10
2926 3604 3.825160 AAGCGCGTGTGGGTGATGT 62.825 57.895 8.43 0.00 0.00 3.06
3081 3759 1.834822 CCTCATCCTCCTCCCCGTC 60.835 68.421 0.00 0.00 0.00 4.79
3285 3963 0.108138 AGCCGATGAAGCGCTACTTT 60.108 50.000 12.05 0.00 39.29 2.66
3292 3970 0.673644 GAAGCGCTACTTTGGGCAGA 60.674 55.000 12.05 0.00 46.41 4.26
3561 4239 2.091112 CAAGCAGACGGTGAGCGAG 61.091 63.158 12.27 1.04 0.00 5.03
3571 4249 1.652930 GTGAGCGAGCGATCGAGAC 60.653 63.158 29.29 15.08 32.52 3.36
3597 4275 3.237268 AGCTCCGGTCTCTTCAGATAT 57.763 47.619 0.00 0.00 0.00 1.63
3599 4277 2.887783 GCTCCGGTCTCTTCAGATATGA 59.112 50.000 0.00 0.00 0.00 2.15
3600 4278 3.057596 GCTCCGGTCTCTTCAGATATGAG 60.058 52.174 0.00 0.00 0.00 2.90
3612 4290 8.250143 TCTTCAGATATGAGCTATGTTTGGTA 57.750 34.615 0.00 0.00 0.00 3.25
3617 4295 9.416794 CAGATATGAGCTATGTTTGGTAGTAAG 57.583 37.037 0.00 0.00 0.00 2.34
3621 4299 8.943909 ATGAGCTATGTTTGGTAGTAAGTAAC 57.056 34.615 0.00 0.00 0.00 2.50
3622 4300 8.130671 TGAGCTATGTTTGGTAGTAAGTAACT 57.869 34.615 0.00 0.00 42.62 2.24
3623 4301 8.248945 TGAGCTATGTTTGGTAGTAAGTAACTC 58.751 37.037 0.00 0.00 39.80 3.01
3624 4302 7.256286 AGCTATGTTTGGTAGTAAGTAACTCG 58.744 38.462 0.00 0.00 39.80 4.18
3629 4307 6.018832 TGTTTGGTAGTAAGTAACTCGTTTGC 60.019 38.462 0.00 0.00 39.80 3.68
3721 4399 4.337060 TCGCACGGACTCACCACG 62.337 66.667 0.00 0.00 38.90 4.94
4049 4730 1.202510 ACGAGCAGATTCAGAGCCATC 60.203 52.381 0.00 0.00 0.00 3.51
4065 4746 1.202580 CCATCTTCTCCCAGGTAAGCG 60.203 57.143 0.00 0.00 0.00 4.68
4066 4747 1.123928 ATCTTCTCCCAGGTAAGCGG 58.876 55.000 0.00 0.00 0.00 5.52
4089 4775 2.956964 GAGCAATCGAGCCGACGG 60.957 66.667 10.29 10.29 39.18 4.79
4090 4776 3.411418 GAGCAATCGAGCCGACGGA 62.411 63.158 20.50 0.00 39.18 4.69
4091 4777 2.508439 GCAATCGAGCCGACGGAA 60.508 61.111 20.50 0.00 39.18 4.30
4132 4818 5.709966 GAAGGATTCGCTTTTAACAATGGT 58.290 37.500 0.00 0.00 34.17 3.55
4133 4819 5.722021 AGGATTCGCTTTTAACAATGGTT 57.278 34.783 0.00 0.00 41.06 3.67
4166 4853 0.464373 CAGATATGCAGGCCACCGTT 60.464 55.000 5.01 0.00 0.00 4.44
4245 4932 2.626088 ACGCCAAGTAAGTACGAGTC 57.374 50.000 0.00 0.00 0.00 3.36
4282 4972 0.736325 CGACGTCCATGGTGGTTCTC 60.736 60.000 12.58 0.00 39.03 2.87
4294 4984 2.872858 GGTGGTTCTCAACTTGTCTGAC 59.127 50.000 0.00 0.00 0.00 3.51
4864 5562 4.828925 GAGCTCAGGCGGCTGTCC 62.829 72.222 34.57 25.80 44.37 4.02
4939 5637 2.743664 CTGACCTGAATTTCGACATGCA 59.256 45.455 0.00 0.00 0.00 3.96
4940 5638 3.346315 TGACCTGAATTTCGACATGCAT 58.654 40.909 0.00 0.00 0.00 3.96
4941 5639 3.127376 TGACCTGAATTTCGACATGCATG 59.873 43.478 25.09 25.09 0.00 4.06
4942 5640 3.084039 ACCTGAATTTCGACATGCATGT 58.916 40.909 31.82 31.82 45.16 3.21
4943 5641 3.507233 ACCTGAATTTCGACATGCATGTT 59.493 39.130 31.82 16.13 41.95 2.71
4944 5642 4.699735 ACCTGAATTTCGACATGCATGTTA 59.300 37.500 31.82 20.58 41.95 2.41
5065 5779 5.176406 GCACATTTCTTCCTTTCTTCTTTGC 59.824 40.000 0.00 0.00 0.00 3.68
5066 5780 5.400485 CACATTTCTTCCTTTCTTCTTTGCG 59.600 40.000 0.00 0.00 0.00 4.85
5071 5785 5.794894 TCTTCCTTTCTTCTTTGCGTATCT 58.205 37.500 0.00 0.00 0.00 1.98
5072 5786 6.231211 TCTTCCTTTCTTCTTTGCGTATCTT 58.769 36.000 0.00 0.00 0.00 2.40
5073 5787 7.383687 TCTTCCTTTCTTCTTTGCGTATCTTA 58.616 34.615 0.00 0.00 0.00 2.10
5078 5792 9.704098 CCTTTCTTCTTTGCGTATCTTATTAAC 57.296 33.333 0.00 0.00 0.00 2.01
5138 5897 7.826260 TTTCCTCAAAAACAACAACTTCATC 57.174 32.000 0.00 0.00 0.00 2.92
5139 5898 5.901552 TCCTCAAAAACAACAACTTCATCC 58.098 37.500 0.00 0.00 0.00 3.51
5140 5899 5.049828 CCTCAAAAACAACAACTTCATCCC 58.950 41.667 0.00 0.00 0.00 3.85
5141 5900 5.017294 TCAAAAACAACAACTTCATCCCC 57.983 39.130 0.00 0.00 0.00 4.81
5142 5901 3.726291 AAAACAACAACTTCATCCCCG 57.274 42.857 0.00 0.00 0.00 5.73
5143 5902 2.358322 AACAACAACTTCATCCCCGT 57.642 45.000 0.00 0.00 0.00 5.28
5144 5903 3.495434 AACAACAACTTCATCCCCGTA 57.505 42.857 0.00 0.00 0.00 4.02
5145 5904 3.713826 ACAACAACTTCATCCCCGTAT 57.286 42.857 0.00 0.00 0.00 3.06
5146 5905 3.606687 ACAACAACTTCATCCCCGTATC 58.393 45.455 0.00 0.00 0.00 2.24
5147 5906 3.263425 ACAACAACTTCATCCCCGTATCT 59.737 43.478 0.00 0.00 0.00 1.98
5148 5907 3.821421 ACAACTTCATCCCCGTATCTC 57.179 47.619 0.00 0.00 0.00 2.75
5149 5908 3.104512 ACAACTTCATCCCCGTATCTCA 58.895 45.455 0.00 0.00 0.00 3.27
5150 5909 3.133003 ACAACTTCATCCCCGTATCTCAG 59.867 47.826 0.00 0.00 0.00 3.35
5151 5910 3.033659 ACTTCATCCCCGTATCTCAGT 57.966 47.619 0.00 0.00 0.00 3.41
5152 5911 2.959707 ACTTCATCCCCGTATCTCAGTC 59.040 50.000 0.00 0.00 0.00 3.51
5153 5912 1.996798 TCATCCCCGTATCTCAGTCC 58.003 55.000 0.00 0.00 0.00 3.85
5154 5913 1.499438 TCATCCCCGTATCTCAGTCCT 59.501 52.381 0.00 0.00 0.00 3.85
5155 5914 1.889829 CATCCCCGTATCTCAGTCCTC 59.110 57.143 0.00 0.00 0.00 3.71
5156 5915 1.223501 TCCCCGTATCTCAGTCCTCT 58.776 55.000 0.00 0.00 0.00 3.69
5157 5916 2.415624 TCCCCGTATCTCAGTCCTCTA 58.584 52.381 0.00 0.00 0.00 2.43
5158 5917 2.372504 TCCCCGTATCTCAGTCCTCTAG 59.627 54.545 0.00 0.00 0.00 2.43
5159 5918 2.106857 CCCCGTATCTCAGTCCTCTAGT 59.893 54.545 0.00 0.00 0.00 2.57
5160 5919 3.435313 CCCCGTATCTCAGTCCTCTAGTT 60.435 52.174 0.00 0.00 0.00 2.24
5161 5920 4.208746 CCCGTATCTCAGTCCTCTAGTTT 58.791 47.826 0.00 0.00 0.00 2.66
5162 5921 5.374921 CCCGTATCTCAGTCCTCTAGTTTA 58.625 45.833 0.00 0.00 0.00 2.01
5163 5922 6.005198 CCCGTATCTCAGTCCTCTAGTTTAT 58.995 44.000 0.00 0.00 0.00 1.40
5164 5923 7.166851 CCCGTATCTCAGTCCTCTAGTTTATA 58.833 42.308 0.00 0.00 0.00 0.98
5165 5924 7.119553 CCCGTATCTCAGTCCTCTAGTTTATAC 59.880 44.444 0.00 0.00 0.00 1.47
5166 5925 7.879160 CCGTATCTCAGTCCTCTAGTTTATACT 59.121 40.741 0.00 0.00 38.44 2.12
5167 5926 8.928733 CGTATCTCAGTCCTCTAGTTTATACTC 58.071 40.741 0.00 0.00 35.78 2.59
5170 5929 8.326765 TCTCAGTCCTCTAGTTTATACTCTCT 57.673 38.462 0.00 0.00 35.78 3.10
5171 5930 8.426489 TCTCAGTCCTCTAGTTTATACTCTCTC 58.574 40.741 0.00 0.00 35.78 3.20
5172 5931 8.326765 TCAGTCCTCTAGTTTATACTCTCTCT 57.673 38.462 0.00 0.00 35.78 3.10
5173 5932 8.208224 TCAGTCCTCTAGTTTATACTCTCTCTG 58.792 40.741 0.00 0.00 35.78 3.35
5174 5933 7.990886 CAGTCCTCTAGTTTATACTCTCTCTGT 59.009 40.741 0.00 0.00 35.78 3.41
5175 5934 9.216148 AGTCCTCTAGTTTATACTCTCTCTGTA 57.784 37.037 0.00 0.00 35.78 2.74
5176 5935 9.835389 GTCCTCTAGTTTATACTCTCTCTGTAA 57.165 37.037 0.00 0.00 35.78 2.41
5177 5936 9.835389 TCCTCTAGTTTATACTCTCTCTGTAAC 57.165 37.037 0.00 0.00 35.78 2.50
5178 5937 9.841295 CCTCTAGTTTATACTCTCTCTGTAACT 57.159 37.037 0.00 0.00 35.78 2.24
5310 6069 9.571810 GATGTCATGCAACACTTCATTTATTAA 57.428 29.630 0.00 0.00 30.55 1.40
5333 6092 9.781834 TTAATTTGTAGACGCATCTTATTTTGG 57.218 29.630 0.00 0.00 36.29 3.28
5447 6206 2.223112 GCTAAGATGCACACAACCATCG 60.223 50.000 0.00 0.00 41.98 3.84
5485 6244 6.978080 GGCAAAGAGTAAAAATGACAAAGTGA 59.022 34.615 0.00 0.00 0.00 3.41
5491 6250 8.184192 AGAGTAAAAATGACAAAGTGACAACAG 58.816 33.333 0.00 0.00 0.00 3.16
5518 6277 4.345257 AGCCATATGAGACCGAAACTATGT 59.655 41.667 3.65 0.00 0.00 2.29
5539 6298 2.014857 CTATGTCGACGGAGAAGGTGA 58.985 52.381 11.62 0.00 0.00 4.02
5546 6305 1.064357 GACGGAGAAGGTGACTCGATC 59.936 57.143 0.00 0.00 42.68 3.69
5568 6327 1.312815 GAGATTATGCTGCCACCCAC 58.687 55.000 0.00 0.00 0.00 4.61
5618 6377 0.326595 TCCAACCGCATACACACCAT 59.673 50.000 0.00 0.00 0.00 3.55
5634 6393 4.024133 CACACCATCTTGAACAACGATTGA 60.024 41.667 0.00 0.00 0.00 2.57
5644 6403 4.992319 TGAACAACGATTGATACTCCGTTT 59.008 37.500 0.00 0.00 42.38 3.60
5683 6442 1.448985 ACGAAGCCAATGCGTACAAT 58.551 45.000 0.00 0.00 44.33 2.71
5781 6802 2.978824 GCAGACGCTCCCACCTAA 59.021 61.111 0.00 0.00 34.30 2.69
5847 6870 8.916062 TCATTAAATCATCATTGCCACATAAGT 58.084 29.630 0.00 0.00 0.00 2.24
5887 6910 8.822805 TGAACCTTATGTTACTCCTGAAGTTAT 58.177 33.333 0.00 0.00 39.55 1.89
5890 6913 9.047947 ACCTTATGTTACTCCTGAAGTTATTCT 57.952 33.333 0.00 0.00 39.55 2.40
5891 6914 9.892130 CCTTATGTTACTCCTGAAGTTATTCTT 57.108 33.333 0.00 0.00 39.55 2.52
5895 6918 9.877178 ATGTTACTCCTGAAGTTATTCTTACTG 57.123 33.333 0.00 0.00 39.55 2.74
5957 6981 8.788806 TGACCGTGTCAAAATAGTAATTTCATT 58.211 29.630 4.51 0.00 39.78 2.57
5960 6984 8.240682 CCGTGTCAAAATAGTAATTTCATTCCA 58.759 33.333 0.00 0.00 34.12 3.53
6084 7108 0.824759 GGCTCCTCGGCTCTCTTTTA 59.175 55.000 0.00 0.00 34.85 1.52
6131 7155 2.198827 TACCGAGAAGTTCCCACGTA 57.801 50.000 0.00 0.00 0.00 3.57
6172 7196 3.865446 TGAAGATGCATCAGTCAACGAT 58.135 40.909 27.81 1.29 0.00 3.73
6187 7779 1.508632 ACGATTTCCTCACAACCACG 58.491 50.000 0.00 0.00 0.00 4.94
6242 7834 0.325933 TCAGGCACATGAGGAAGTGG 59.674 55.000 0.00 0.00 36.29 4.00
6261 7853 3.438434 GTGGAACAGATTCAAAGAGAGGC 59.562 47.826 0.00 0.00 41.80 4.70
6271 7863 0.603975 AAAGAGAGGCGCTCAACACC 60.604 55.000 20.44 0.00 46.45 4.16
6275 7867 2.357517 AGGCGCTCAACACCGAAG 60.358 61.111 7.64 0.00 0.00 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 9.019656 ACCTAATTCAGTGTACATAATTTTGCA 57.980 29.630 14.91 0.00 0.00 4.08
93 94 4.072131 GCCTCTTCATTACCACAACAAGA 58.928 43.478 0.00 0.00 0.00 3.02
129 130 5.218139 CAAGAACATTTGGAGAACTCTTGC 58.782 41.667 1.86 0.00 33.95 4.01
138 139 4.935702 TCAAAGCACAAGAACATTTGGAG 58.064 39.130 0.00 0.00 32.91 3.86
186 187 6.073548 ACTGCGCATTGATAATTAGCTTACTC 60.074 38.462 12.24 0.00 0.00 2.59
211 212 5.795972 TGTCCGTTATCTGTGATACCAAAA 58.204 37.500 0.00 0.00 0.00 2.44
213 214 5.128008 TCATGTCCGTTATCTGTGATACCAA 59.872 40.000 0.00 0.00 0.00 3.67
214 215 4.647399 TCATGTCCGTTATCTGTGATACCA 59.353 41.667 0.00 0.00 0.00 3.25
215 216 5.196341 TCATGTCCGTTATCTGTGATACC 57.804 43.478 0.00 0.00 0.00 2.73
216 217 6.292381 GCTTTCATGTCCGTTATCTGTGATAC 60.292 42.308 0.00 0.00 0.00 2.24
219 220 3.932710 GCTTTCATGTCCGTTATCTGTGA 59.067 43.478 0.00 0.00 0.00 3.58
220 221 3.935203 AGCTTTCATGTCCGTTATCTGTG 59.065 43.478 0.00 0.00 0.00 3.66
221 222 4.207891 AGCTTTCATGTCCGTTATCTGT 57.792 40.909 0.00 0.00 0.00 3.41
222 223 6.293081 CCATTAGCTTTCATGTCCGTTATCTG 60.293 42.308 0.00 0.00 0.00 2.90
223 224 5.760253 CCATTAGCTTTCATGTCCGTTATCT 59.240 40.000 0.00 0.00 0.00 1.98
225 226 4.275936 GCCATTAGCTTTCATGTCCGTTAT 59.724 41.667 0.00 0.00 38.99 1.89
227 228 2.423538 GCCATTAGCTTTCATGTCCGTT 59.576 45.455 0.00 0.00 38.99 4.44
228 229 2.017049 GCCATTAGCTTTCATGTCCGT 58.983 47.619 0.00 0.00 38.99 4.69
229 230 2.016318 TGCCATTAGCTTTCATGTCCG 58.984 47.619 0.00 0.00 44.23 4.79
231 232 4.357142 CACATGCCATTAGCTTTCATGTC 58.643 43.478 12.74 0.00 43.88 3.06
233 234 3.491964 CCCACATGCCATTAGCTTTCATG 60.492 47.826 0.00 1.73 44.23 3.07
234 235 2.696707 CCCACATGCCATTAGCTTTCAT 59.303 45.455 0.00 0.00 44.23 2.57
237 238 1.488390 CCCCACATGCCATTAGCTTT 58.512 50.000 0.00 0.00 44.23 3.51
238 239 0.397535 CCCCCACATGCCATTAGCTT 60.398 55.000 0.00 0.00 44.23 3.74
240 241 0.825010 CTCCCCCACATGCCATTAGC 60.825 60.000 0.00 0.00 44.14 3.09
241 242 0.825010 GCTCCCCCACATGCCATTAG 60.825 60.000 0.00 0.00 0.00 1.73
242 243 1.229927 GCTCCCCCACATGCCATTA 59.770 57.895 0.00 0.00 0.00 1.90
243 244 2.042639 GCTCCCCCACATGCCATT 60.043 61.111 0.00 0.00 0.00 3.16
244 245 3.349304 TGCTCCCCCACATGCCAT 61.349 61.111 0.00 0.00 0.00 4.40
245 246 4.365111 GTGCTCCCCCACATGCCA 62.365 66.667 0.00 0.00 35.80 4.92
248 249 3.687321 CTCCGTGCTCCCCCACATG 62.687 68.421 0.00 0.00 35.47 3.21
249 250 3.402681 CTCCGTGCTCCCCCACAT 61.403 66.667 0.00 0.00 35.47 3.21
250 251 4.954118 ACTCCGTGCTCCCCCACA 62.954 66.667 0.00 0.00 35.47 4.17
251 252 4.394712 CACTCCGTGCTCCCCCAC 62.395 72.222 0.00 0.00 0.00 4.61
252 253 4.631740 TCACTCCGTGCTCCCCCA 62.632 66.667 0.00 0.00 32.98 4.96
253 254 4.083862 GTCACTCCGTGCTCCCCC 62.084 72.222 0.00 0.00 32.98 5.40
254 255 2.997897 AGTCACTCCGTGCTCCCC 60.998 66.667 0.00 0.00 32.98 4.81
255 256 2.262915 CAGTCACTCCGTGCTCCC 59.737 66.667 0.00 0.00 32.98 4.30
256 257 1.816863 TTCCAGTCACTCCGTGCTCC 61.817 60.000 0.00 0.00 32.98 4.70
262 263 1.442769 CCATGTTTCCAGTCACTCCG 58.557 55.000 0.00 0.00 0.00 4.63
266 267 1.956477 ACTTGCCATGTTTCCAGTCAC 59.044 47.619 0.00 0.00 0.00 3.67
280 281 0.824759 ACCATCTACCGAGACTTGCC 59.175 55.000 0.00 0.00 33.41 4.52
281 282 2.674796 AACCATCTACCGAGACTTGC 57.325 50.000 0.00 0.00 33.41 4.01
282 283 5.068234 TGTAAACCATCTACCGAGACTTG 57.932 43.478 0.00 0.00 33.41 3.16
296 297 5.647658 CCTCACATGCTCTTTATGTAAACCA 59.352 40.000 0.00 0.00 36.67 3.67
297 298 5.648092 ACCTCACATGCTCTTTATGTAAACC 59.352 40.000 0.00 0.00 36.67 3.27
298 299 6.403636 CCACCTCACATGCTCTTTATGTAAAC 60.404 42.308 0.00 0.00 36.67 2.01
299 300 5.647658 CCACCTCACATGCTCTTTATGTAAA 59.352 40.000 0.00 0.00 36.67 2.01
300 301 5.185454 CCACCTCACATGCTCTTTATGTAA 58.815 41.667 0.00 0.00 36.67 2.41
301 302 4.225042 ACCACCTCACATGCTCTTTATGTA 59.775 41.667 0.00 0.00 36.67 2.29
302 303 3.009473 ACCACCTCACATGCTCTTTATGT 59.991 43.478 0.00 0.00 39.23 2.29
303 304 3.376234 CACCACCTCACATGCTCTTTATG 59.624 47.826 0.00 0.00 0.00 1.90
304 305 3.009473 ACACCACCTCACATGCTCTTTAT 59.991 43.478 0.00 0.00 0.00 1.40
305 306 2.371841 ACACCACCTCACATGCTCTTTA 59.628 45.455 0.00 0.00 0.00 1.85
306 307 1.143684 ACACCACCTCACATGCTCTTT 59.856 47.619 0.00 0.00 0.00 2.52
307 308 0.767375 ACACCACCTCACATGCTCTT 59.233 50.000 0.00 0.00 0.00 2.85
308 309 0.767375 AACACCACCTCACATGCTCT 59.233 50.000 0.00 0.00 0.00 4.09
309 310 2.472695 TAACACCACCTCACATGCTC 57.527 50.000 0.00 0.00 0.00 4.26
310 311 2.106511 ACTTAACACCACCTCACATGCT 59.893 45.455 0.00 0.00 0.00 3.79
311 312 2.226437 CACTTAACACCACCTCACATGC 59.774 50.000 0.00 0.00 0.00 4.06
312 313 2.226437 GCACTTAACACCACCTCACATG 59.774 50.000 0.00 0.00 0.00 3.21
313 314 2.158682 TGCACTTAACACCACCTCACAT 60.159 45.455 0.00 0.00 0.00 3.21
314 315 1.210722 TGCACTTAACACCACCTCACA 59.789 47.619 0.00 0.00 0.00 3.58
315 316 1.873591 CTGCACTTAACACCACCTCAC 59.126 52.381 0.00 0.00 0.00 3.51
316 317 1.765904 TCTGCACTTAACACCACCTCA 59.234 47.619 0.00 0.00 0.00 3.86
317 318 2.037251 TCTCTGCACTTAACACCACCTC 59.963 50.000 0.00 0.00 0.00 3.85
318 319 2.047061 TCTCTGCACTTAACACCACCT 58.953 47.619 0.00 0.00 0.00 4.00
319 320 2.543777 TCTCTGCACTTAACACCACC 57.456 50.000 0.00 0.00 0.00 4.61
320 321 3.403038 ACATCTCTGCACTTAACACCAC 58.597 45.455 0.00 0.00 0.00 4.16
347 348 9.778993 TCAGTACGTACATCTTAAAGAATGTAC 57.221 33.333 26.55 17.45 0.00 2.90
349 350 9.701098 TTTCAGTACGTACATCTTAAAGAATGT 57.299 29.630 26.55 0.00 0.00 2.71
388 450 4.737352 GCAAATGCCAACTTCTCTTGTTCA 60.737 41.667 0.00 0.00 34.31 3.18
392 454 3.005050 TCAGCAAATGCCAACTTCTCTTG 59.995 43.478 0.94 0.00 43.38 3.02
397 459 1.000060 TGCTCAGCAAATGCCAACTTC 60.000 47.619 0.00 0.00 43.38 3.01
403 465 0.737219 CTACCTGCTCAGCAAATGCC 59.263 55.000 0.00 0.00 43.38 4.40
414 476 7.051000 GGAGAAAAACTAATGATCTACCTGCT 58.949 38.462 0.00 0.00 0.00 4.24
436 498 2.408565 TGTAGGGCAGGATTTAGGGAG 58.591 52.381 0.00 0.00 0.00 4.30
447 511 1.541588 GCCAGAAAGTTTGTAGGGCAG 59.458 52.381 8.70 0.00 39.66 4.85
458 522 5.647225 TGCAAAATTTTGAAAGCCAGAAAGT 59.353 32.000 30.40 0.00 40.55 2.66
482 546 4.752101 GGCAAGAATCGACATACATAAGCT 59.248 41.667 0.00 0.00 0.00 3.74
483 547 4.083802 GGGCAAGAATCGACATACATAAGC 60.084 45.833 0.00 0.00 0.00 3.09
484 548 5.300752 AGGGCAAGAATCGACATACATAAG 58.699 41.667 0.00 0.00 0.00 1.73
486 550 4.955811 AGGGCAAGAATCGACATACATA 57.044 40.909 0.00 0.00 0.00 2.29
487 551 3.845781 AGGGCAAGAATCGACATACAT 57.154 42.857 0.00 0.00 0.00 2.29
488 552 3.531538 GAAGGGCAAGAATCGACATACA 58.468 45.455 0.00 0.00 0.00 2.29
520 605 2.560861 CGGGGCGTGTGTGATTTG 59.439 61.111 0.00 0.00 0.00 2.32
521 606 2.671619 CCGGGGCGTGTGTGATTT 60.672 61.111 0.00 0.00 0.00 2.17
532 617 4.832608 CCTAAGCGACACCGGGGC 62.833 72.222 1.73 1.51 36.06 5.80
585 670 0.763986 AATGCCTGGTTGGTTGCCTT 60.764 50.000 0.00 0.00 38.35 4.35
587 672 1.194218 ATAATGCCTGGTTGGTTGCC 58.806 50.000 0.00 0.00 38.35 4.52
612 697 4.998051 AGTGGAGACTCTCTTCTTCTTCT 58.002 43.478 6.02 0.00 0.00 2.85
736 836 1.803366 GCTGGATGGGCATAAGCAGC 61.803 60.000 0.00 0.00 44.61 5.25
737 837 0.178998 AGCTGGATGGGCATAAGCAG 60.179 55.000 0.00 0.00 44.61 4.24
738 838 0.466739 CAGCTGGATGGGCATAAGCA 60.467 55.000 5.57 0.00 44.61 3.91
739 839 0.466922 ACAGCTGGATGGGCATAAGC 60.467 55.000 19.93 0.00 41.10 3.09
741 841 3.500331 CACAGCTGGATGGGCATAA 57.500 52.632 19.93 0.00 0.00 1.90
761 861 3.383761 GGTTGTTGGAATTTGAGCACAG 58.616 45.455 0.00 0.00 0.00 3.66
762 862 2.102252 GGGTTGTTGGAATTTGAGCACA 59.898 45.455 0.00 0.00 0.00 4.57
763 863 2.365293 AGGGTTGTTGGAATTTGAGCAC 59.635 45.455 0.00 0.00 0.00 4.40
764 864 2.627699 GAGGGTTGTTGGAATTTGAGCA 59.372 45.455 0.00 0.00 0.00 4.26
765 865 2.351738 CGAGGGTTGTTGGAATTTGAGC 60.352 50.000 0.00 0.00 0.00 4.26
766 866 2.884639 ACGAGGGTTGTTGGAATTTGAG 59.115 45.455 0.00 0.00 0.00 3.02
769 869 2.621526 GTGACGAGGGTTGTTGGAATTT 59.378 45.455 0.00 0.00 0.00 1.82
772 872 0.834612 AGTGACGAGGGTTGTTGGAA 59.165 50.000 0.00 0.00 0.00 3.53
773 873 0.834612 AAGTGACGAGGGTTGTTGGA 59.165 50.000 0.00 0.00 0.00 3.53
774 874 0.944386 CAAGTGACGAGGGTTGTTGG 59.056 55.000 0.00 0.00 0.00 3.77
803 911 5.642063 CCATGGTCAAAGTACGTAGAACATT 59.358 40.000 9.65 0.00 36.34 2.71
807 915 4.877378 ACCATGGTCAAAGTACGTAGAA 57.123 40.909 13.00 0.00 0.00 2.10
815 923 1.899814 TCTCGCTACCATGGTCAAAGT 59.100 47.619 23.76 0.00 0.00 2.66
863 1391 3.502211 GTCCGGTTCCCATGCATATAAAG 59.498 47.826 0.00 0.00 0.00 1.85
920 1448 0.251474 AGGACCTGTGCATGCATGTT 60.251 50.000 25.64 8.60 0.00 2.71
922 1450 1.663379 CCAGGACCTGTGCATGCATG 61.663 60.000 25.64 22.70 0.00 4.06
923 1451 1.379443 CCAGGACCTGTGCATGCAT 60.379 57.895 25.64 7.59 0.00 3.96
924 1452 2.034532 CCAGGACCTGTGCATGCA 59.965 61.111 18.46 18.46 0.00 3.96
925 1453 2.042831 GTCCAGGACCTGTGCATGC 61.043 63.158 20.24 11.82 0.00 4.06
934 1462 0.035820 TAACAATGCCGTCCAGGACC 60.036 55.000 14.46 1.25 45.00 4.46
935 1463 1.816074 TTAACAATGCCGTCCAGGAC 58.184 50.000 9.92 9.92 45.00 3.85
941 1469 6.420604 CCATCCATTATTTTAACAATGCCGTC 59.579 38.462 0.00 0.00 32.00 4.79
956 1484 3.959495 ACCAGTGAAGCCATCCATTAT 57.041 42.857 0.00 0.00 0.00 1.28
957 1485 3.737559 AACCAGTGAAGCCATCCATTA 57.262 42.857 0.00 0.00 0.00 1.90
959 1487 2.564062 CAAAACCAGTGAAGCCATCCAT 59.436 45.455 0.00 0.00 0.00 3.41
1047 1585 3.966154 TCTCGACTCAACTCAACTCAAC 58.034 45.455 0.00 0.00 0.00 3.18
1048 1586 3.883489 TCTCTCGACTCAACTCAACTCAA 59.117 43.478 0.00 0.00 0.00 3.02
1049 1587 3.251245 GTCTCTCGACTCAACTCAACTCA 59.749 47.826 0.00 0.00 37.19 3.41
1050 1588 3.251245 TGTCTCTCGACTCAACTCAACTC 59.749 47.826 0.00 0.00 40.86 3.01
1051 1589 3.215151 TGTCTCTCGACTCAACTCAACT 58.785 45.455 0.00 0.00 40.86 3.16
1052 1590 3.560503 CTGTCTCTCGACTCAACTCAAC 58.439 50.000 0.00 0.00 40.86 3.18
1053 1591 2.554462 CCTGTCTCTCGACTCAACTCAA 59.446 50.000 0.00 0.00 40.86 3.02
1054 1592 2.155279 CCTGTCTCTCGACTCAACTCA 58.845 52.381 0.00 0.00 40.86 3.41
1055 1593 1.470890 CCCTGTCTCTCGACTCAACTC 59.529 57.143 0.00 0.00 40.86 3.01
1056 1594 1.540267 CCCTGTCTCTCGACTCAACT 58.460 55.000 0.00 0.00 40.86 3.16
1057 1595 0.528470 CCCCTGTCTCTCGACTCAAC 59.472 60.000 0.00 0.00 40.86 3.18
1058 1596 1.251527 GCCCCTGTCTCTCGACTCAA 61.252 60.000 0.00 0.00 40.86 3.02
1059 1597 1.679305 GCCCCTGTCTCTCGACTCA 60.679 63.158 0.00 0.00 40.86 3.41
1060 1598 2.766400 CGCCCCTGTCTCTCGACTC 61.766 68.421 0.00 0.00 40.86 3.36
1061 1599 2.752238 CGCCCCTGTCTCTCGACT 60.752 66.667 0.00 0.00 40.86 4.18
1062 1600 3.827898 CCGCCCCTGTCTCTCGAC 61.828 72.222 0.00 0.00 40.64 4.20
1096 1634 2.806434 CATGATGGAAGGTGGTGGAAA 58.194 47.619 0.00 0.00 0.00 3.13
1170 1710 1.268539 GGTTTTTGTGTCCGTCTGCTG 60.269 52.381 0.00 0.00 0.00 4.41
1175 1715 3.119779 TGTTGAAGGTTTTTGTGTCCGTC 60.120 43.478 0.00 0.00 0.00 4.79
1204 1744 5.885230 TGATGTTTCTTAGCCATCAAGTG 57.115 39.130 0.00 0.00 41.33 3.16
1208 1748 5.183713 CAGGTTTGATGTTTCTTAGCCATCA 59.816 40.000 0.00 0.00 42.25 3.07
1209 1749 5.415701 TCAGGTTTGATGTTTCTTAGCCATC 59.584 40.000 0.00 0.00 36.40 3.51
1210 1750 5.324409 TCAGGTTTGATGTTTCTTAGCCAT 58.676 37.500 0.00 0.00 0.00 4.40
1211 1751 4.724399 TCAGGTTTGATGTTTCTTAGCCA 58.276 39.130 0.00 0.00 0.00 4.75
1212 1752 5.241728 ACTTCAGGTTTGATGTTTCTTAGCC 59.758 40.000 0.00 0.00 38.21 3.93
1213 1753 6.205658 AGACTTCAGGTTTGATGTTTCTTAGC 59.794 38.462 0.00 0.00 40.58 3.09
1214 1754 7.659390 AGAGACTTCAGGTTTGATGTTTCTTAG 59.341 37.037 9.40 0.00 43.97 2.18
1215 1755 7.442364 CAGAGACTTCAGGTTTGATGTTTCTTA 59.558 37.037 11.43 0.00 43.97 2.10
1216 1756 6.261826 CAGAGACTTCAGGTTTGATGTTTCTT 59.738 38.462 11.43 0.49 43.97 2.52
1217 1757 5.762218 CAGAGACTTCAGGTTTGATGTTTCT 59.238 40.000 9.40 9.40 45.64 2.52
1218 1758 5.049129 CCAGAGACTTCAGGTTTGATGTTTC 60.049 44.000 6.19 6.19 40.58 2.78
1219 1759 4.823989 CCAGAGACTTCAGGTTTGATGTTT 59.176 41.667 0.00 0.00 40.58 2.83
1220 1760 4.141390 ACCAGAGACTTCAGGTTTGATGTT 60.141 41.667 0.00 0.00 39.98 2.71
1221 1761 3.392616 ACCAGAGACTTCAGGTTTGATGT 59.607 43.478 0.00 0.00 39.98 3.06
1222 1762 3.750130 CACCAGAGACTTCAGGTTTGATG 59.250 47.826 0.00 0.00 39.98 3.07
1223 1763 3.392616 ACACCAGAGACTTCAGGTTTGAT 59.607 43.478 0.00 0.00 39.98 2.57
1224 1764 2.771943 ACACCAGAGACTTCAGGTTTGA 59.228 45.455 0.00 0.00 39.98 2.69
1225 1765 3.199880 ACACCAGAGACTTCAGGTTTG 57.800 47.619 0.00 0.00 39.98 2.93
1226 1766 3.243771 CGTACACCAGAGACTTCAGGTTT 60.244 47.826 0.00 0.00 39.98 3.27
1227 1767 2.296471 CGTACACCAGAGACTTCAGGTT 59.704 50.000 0.00 0.00 39.98 3.50
1228 1768 1.887198 CGTACACCAGAGACTTCAGGT 59.113 52.381 0.00 0.00 43.35 4.00
1229 1769 1.402984 GCGTACACCAGAGACTTCAGG 60.403 57.143 0.00 0.00 36.15 3.86
1230 1770 1.269723 TGCGTACACCAGAGACTTCAG 59.730 52.381 0.00 0.00 0.00 3.02
1231 1771 1.000607 GTGCGTACACCAGAGACTTCA 60.001 52.381 0.00 0.00 41.21 3.02
1232 1772 1.000607 TGTGCGTACACCAGAGACTTC 60.001 52.381 0.82 0.00 46.86 3.01
1233 1773 1.037493 TGTGCGTACACCAGAGACTT 58.963 50.000 0.82 0.00 46.86 3.01
1234 1774 2.728397 TGTGCGTACACCAGAGACT 58.272 52.632 0.82 0.00 46.86 3.24
1243 1783 1.883544 CGGTTGTGGTGTGCGTACA 60.884 57.895 0.82 0.82 0.00 2.90
1244 1784 1.884004 ACGGTTGTGGTGTGCGTAC 60.884 57.895 0.00 0.00 0.00 3.67
1245 1785 1.883544 CACGGTTGTGGTGTGCGTA 60.884 57.895 0.00 0.00 42.59 4.42
1246 1786 3.199190 CACGGTTGTGGTGTGCGT 61.199 61.111 0.00 0.00 42.59 5.24
1249 1789 3.591835 GGGCACGGTTGTGGTGTG 61.592 66.667 0.00 0.00 46.51 3.82
1250 1790 3.767630 GAGGGCACGGTTGTGGTGT 62.768 63.158 0.00 0.00 46.51 4.16
1251 1791 2.978010 GAGGGCACGGTTGTGGTG 60.978 66.667 0.00 0.00 46.51 4.17
1264 1804 3.775316 AGTAGTAGTGGATTTGGTGAGGG 59.225 47.826 0.00 0.00 0.00 4.30
1277 1817 5.960113 AGAGAGATGCAAACAGTAGTAGTG 58.040 41.667 3.30 3.30 0.00 2.74
1306 1866 1.816835 AGCAAGAATGTGCAGGACATG 59.183 47.619 8.54 0.00 45.12 3.21
1316 1876 2.299326 AGCCAAGGAAGCAAGAATGT 57.701 45.000 0.00 0.00 0.00 2.71
1356 1921 2.677337 GTCTGAAGAATGGAAGCAGAGC 59.323 50.000 0.00 0.00 36.39 4.09
1360 1925 5.668471 CTGATAGTCTGAAGAATGGAAGCA 58.332 41.667 0.00 0.00 0.00 3.91
1406 1972 1.531149 TGAAGCAAACTAGCGAGCAAC 59.469 47.619 0.00 0.00 40.15 4.17
1482 2062 1.302511 GCGCCCTTGTTCTCTTCCA 60.303 57.895 0.00 0.00 0.00 3.53
1920 2500 1.624865 CTGCAAGTGAGTGAGCGAGC 61.625 60.000 0.00 0.00 0.00 5.03
1921 2501 2.443146 CTGCAAGTGAGTGAGCGAG 58.557 57.895 0.00 0.00 0.00 5.03
1922 2502 4.661461 CTGCAAGTGAGTGAGCGA 57.339 55.556 0.00 0.00 0.00 4.93
1955 2535 0.465824 ATGGATGAGGAGCAAGCTGC 60.466 55.000 5.35 5.35 45.46 5.25
1956 2536 2.054232 AATGGATGAGGAGCAAGCTG 57.946 50.000 0.00 0.00 0.00 4.24
1957 2537 2.241685 AGAAATGGATGAGGAGCAAGCT 59.758 45.455 0.00 0.00 0.00 3.74
1958 2538 2.617774 GAGAAATGGATGAGGAGCAAGC 59.382 50.000 0.00 0.00 0.00 4.01
1959 2539 3.878103 CAGAGAAATGGATGAGGAGCAAG 59.122 47.826 0.00 0.00 0.00 4.01
1960 2540 3.520721 TCAGAGAAATGGATGAGGAGCAA 59.479 43.478 0.00 0.00 0.00 3.91
1961 2541 3.109928 TCAGAGAAATGGATGAGGAGCA 58.890 45.455 0.00 0.00 0.00 4.26
1962 2542 3.834489 TCAGAGAAATGGATGAGGAGC 57.166 47.619 0.00 0.00 0.00 4.70
1963 2543 4.128643 GCTTCAGAGAAATGGATGAGGAG 58.871 47.826 0.00 0.00 0.00 3.69
1964 2544 3.431346 CGCTTCAGAGAAATGGATGAGGA 60.431 47.826 0.00 0.00 0.00 3.71
1965 2545 2.871022 CGCTTCAGAGAAATGGATGAGG 59.129 50.000 0.00 0.00 0.00 3.86
1989 2569 6.851330 CGAAAATTCAGACTTGTAAACCTGAC 59.149 38.462 0.00 0.00 32.40 3.51
1990 2570 6.017440 CCGAAAATTCAGACTTGTAAACCTGA 60.017 38.462 0.00 0.00 31.26 3.86
1991 2571 6.142817 CCGAAAATTCAGACTTGTAAACCTG 58.857 40.000 0.00 0.00 0.00 4.00
2034 2631 5.446860 AGATCATTTCAGAATCATGGCAGT 58.553 37.500 0.00 0.00 0.00 4.40
2035 2632 6.392625 AAGATCATTTCAGAATCATGGCAG 57.607 37.500 0.00 0.00 0.00 4.85
2036 2633 5.301045 GGAAGATCATTTCAGAATCATGGCA 59.699 40.000 0.00 0.00 0.00 4.92
2037 2634 5.278858 GGGAAGATCATTTCAGAATCATGGC 60.279 44.000 0.00 0.00 0.00 4.40
2038 2635 5.831525 TGGGAAGATCATTTCAGAATCATGG 59.168 40.000 0.00 0.00 0.00 3.66
2039 2636 6.954487 TGGGAAGATCATTTCAGAATCATG 57.046 37.500 0.00 0.00 0.00 3.07
2040 2637 7.966339 TTTGGGAAGATCATTTCAGAATCAT 57.034 32.000 0.00 0.00 0.00 2.45
2041 2638 7.966339 ATTTGGGAAGATCATTTCAGAATCA 57.034 32.000 0.00 0.00 0.00 2.57
2087 2684 2.280186 GCCGCGAATTCCTCCGAT 60.280 61.111 8.23 0.00 0.00 4.18
2096 2693 2.106131 TACATCTGCGCCGCGAAT 59.894 55.556 18.91 3.31 0.00 3.34
2139 2736 1.300931 TCAGCACCTGAGCAACGAC 60.301 57.895 0.00 0.00 35.39 4.34
2219 2816 4.211374 ACGTACATGTCAAAGAAAGTCTGC 59.789 41.667 0.00 0.00 0.00 4.26
2254 2851 2.309136 AGTTGAAGTTGGGGATTGGG 57.691 50.000 0.00 0.00 0.00 4.12
2266 2863 9.390795 CATTTCAGATTACAGACAAAGTTGAAG 57.609 33.333 0.00 0.00 0.00 3.02
2338 2936 6.238621 CCTGCAACAAGTTAGTACAATTGTCA 60.239 38.462 15.85 1.01 34.92 3.58
2375 2974 2.579787 GTGATCCGACCGTCTGCG 60.580 66.667 0.00 0.00 37.95 5.18
2433 3032 2.423926 AGTTACTCGTGACTGCACTG 57.576 50.000 0.00 0.00 42.93 3.66
2436 3035 2.882927 ACAAGTTACTCGTGACTGCA 57.117 45.000 0.00 0.00 29.35 4.41
2438 3037 5.464965 AACAAACAAGTTACTCGTGACTG 57.535 39.130 0.00 0.00 29.35 3.51
2439 3038 5.410439 ACAAACAAACAAGTTACTCGTGACT 59.590 36.000 0.00 0.00 0.00 3.41
2440 3039 5.624292 ACAAACAAACAAGTTACTCGTGAC 58.376 37.500 0.00 0.00 0.00 3.67
2442 3041 6.535811 TGTACAAACAAACAAGTTACTCGTG 58.464 36.000 0.00 0.00 30.91 4.35
2443 3042 6.369615 ACTGTACAAACAAACAAGTTACTCGT 59.630 34.615 0.00 0.00 34.49 4.18
2444 3043 6.768078 ACTGTACAAACAAACAAGTTACTCG 58.232 36.000 0.00 0.00 34.49 4.18
2536 3174 1.761449 TCTTGGTGAGCTTGTTTGCA 58.239 45.000 0.00 0.00 34.99 4.08
2539 3177 3.152341 CAGGATCTTGGTGAGCTTGTTT 58.848 45.455 0.00 0.00 34.14 2.83
2633 3271 1.134670 CCACGGAAGGAGATGAAGGTC 60.135 57.143 0.00 0.00 0.00 3.85
2635 3273 1.195115 TCCACGGAAGGAGATGAAGG 58.805 55.000 0.00 0.00 32.77 3.46
2637 3275 3.609853 CAATTCCACGGAAGGAGATGAA 58.390 45.455 4.58 0.00 39.25 2.57
2640 3278 1.916181 ACCAATTCCACGGAAGGAGAT 59.084 47.619 10.30 0.00 39.25 2.75
2641 3279 1.358152 ACCAATTCCACGGAAGGAGA 58.642 50.000 10.30 0.00 39.25 3.71
2642 3280 1.812571 CAACCAATTCCACGGAAGGAG 59.187 52.381 10.30 1.72 39.25 3.69
2643 3281 1.144093 ACAACCAATTCCACGGAAGGA 59.856 47.619 10.30 0.00 37.56 3.36
2644 3282 1.616159 ACAACCAATTCCACGGAAGG 58.384 50.000 4.58 3.81 37.56 3.46
2664 3314 3.754965 AGAGTGAGCTGCCAACAATTTA 58.245 40.909 0.00 0.00 0.00 1.40
2688 3342 2.492088 CTGGAGTTGTCGGTATCACTGA 59.508 50.000 0.00 0.00 0.00 3.41
2698 3359 2.135664 AGACGAAACTGGAGTTGTCG 57.864 50.000 15.98 15.98 40.64 4.35
3081 3759 3.357079 GTGAGGGTGTTGCGGCAG 61.357 66.667 1.67 0.00 0.00 4.85
3261 3939 2.296480 GCGCTTCATCGGCTCGTAG 61.296 63.158 0.00 0.00 0.00 3.51
3292 3970 2.044551 GTAGTCCGGGACCCTCGT 60.045 66.667 23.21 7.32 32.18 4.18
3349 4027 1.381928 GCCATGAGCACCACCATGAG 61.382 60.000 0.00 0.00 41.88 2.90
3561 4239 1.590259 GCTTGGAGGTCTCGATCGC 60.590 63.158 11.09 0.00 0.00 4.58
3571 4249 1.261238 AAGAGACCGGAGCTTGGAGG 61.261 60.000 9.46 4.76 0.00 4.30
3597 4275 8.130671 AGTTACTTACTACCAAACATAGCTCA 57.869 34.615 0.00 0.00 34.56 4.26
3599 4277 7.094032 ACGAGTTACTTACTACCAAACATAGCT 60.094 37.037 0.00 0.00 37.17 3.32
3600 4278 7.031975 ACGAGTTACTTACTACCAAACATAGC 58.968 38.462 0.00 0.00 37.17 2.97
3612 4290 7.225931 TCTGAAATTGCAAACGAGTTACTTACT 59.774 33.333 1.71 0.00 40.71 2.24
3617 4295 5.507077 TGTCTGAAATTGCAAACGAGTTAC 58.493 37.500 1.71 0.00 0.00 2.50
3619 4297 4.630894 TGTCTGAAATTGCAAACGAGTT 57.369 36.364 1.71 0.00 0.00 3.01
3620 4298 4.539870 CATGTCTGAAATTGCAAACGAGT 58.460 39.130 1.71 0.00 0.00 4.18
3621 4299 3.916172 CCATGTCTGAAATTGCAAACGAG 59.084 43.478 1.71 0.00 0.00 4.18
3622 4300 3.567585 TCCATGTCTGAAATTGCAAACGA 59.432 39.130 1.71 0.00 0.00 3.85
3623 4301 3.899734 TCCATGTCTGAAATTGCAAACG 58.100 40.909 1.71 0.00 0.00 3.60
3624 4302 5.232463 ACATCCATGTCTGAAATTGCAAAC 58.768 37.500 1.71 0.00 35.87 2.93
3629 4307 6.558009 CAAGGTACATCCATGTCTGAAATTG 58.442 40.000 0.00 0.00 41.97 2.32
3721 4399 0.461961 CCACCTTCTCGATCCTCACC 59.538 60.000 0.00 0.00 0.00 4.02
3944 4625 2.047939 GGGTGCCTGCATTGCAAC 60.048 61.111 15.94 15.94 45.71 4.17
4049 4730 0.108138 CACCGCTTACCTGGGAGAAG 60.108 60.000 0.00 0.00 0.00 2.85
4065 4746 2.467826 GCTCGATTGCTCTGCCACC 61.468 63.158 0.00 0.00 0.00 4.61
4066 4747 2.467826 GGCTCGATTGCTCTGCCAC 61.468 63.158 4.83 0.00 38.07 5.01
4131 4817 0.730265 TCTGCGACCACAACAACAAC 59.270 50.000 0.00 0.00 0.00 3.32
4132 4818 1.674359 ATCTGCGACCACAACAACAA 58.326 45.000 0.00 0.00 0.00 2.83
4133 4819 2.535012 TATCTGCGACCACAACAACA 57.465 45.000 0.00 0.00 0.00 3.33
4182 4869 0.038310 TGAAGTCGGCTCTCAGGAGA 59.962 55.000 0.00 0.00 41.86 3.71
4245 4932 3.358076 GACGGTCCTTCCTGCTCGG 62.358 68.421 0.00 0.00 0.00 4.63
4282 4972 5.818136 TCAAGGAAAAGTCAGACAAGTTG 57.182 39.130 2.66 0.00 0.00 3.16
4294 4984 0.883833 ACGCCAGCATCAAGGAAAAG 59.116 50.000 0.00 0.00 0.00 2.27
4468 5160 4.382541 TCGCCCTCCTGCTCCTGA 62.383 66.667 0.00 0.00 0.00 3.86
4864 5562 2.125912 CGGTGCGAGAAGTCCTGG 60.126 66.667 0.00 0.00 0.00 4.45
4966 5664 8.749499 GCGAATAAAGTGTATATGTTCTACGTT 58.251 33.333 0.00 0.00 0.00 3.99
4967 5665 8.133627 AGCGAATAAAGTGTATATGTTCTACGT 58.866 33.333 0.00 0.00 0.00 3.57
4970 5668 8.761497 GCAAGCGAATAAAGTGTATATGTTCTA 58.239 33.333 0.00 0.00 0.00 2.10
4971 5669 7.495934 AGCAAGCGAATAAAGTGTATATGTTCT 59.504 33.333 0.00 0.00 0.00 3.01
4972 5670 7.584123 CAGCAAGCGAATAAAGTGTATATGTTC 59.416 37.037 0.00 0.00 0.00 3.18
4973 5671 7.065803 ACAGCAAGCGAATAAAGTGTATATGTT 59.934 33.333 0.00 0.00 0.00 2.71
5042 5751 5.400485 CGCAAAGAAGAAAGGAAGAAATGTG 59.600 40.000 0.00 0.00 0.00 3.21
5078 5792 7.759489 AGAGATGCTCTCCTACTTGTATTAG 57.241 40.000 8.89 0.00 44.42 1.73
5094 5808 8.763984 AGGAAATTAATGATTTGAGAGATGCT 57.236 30.769 0.00 0.00 38.06 3.79
5126 5885 3.871594 GAGATACGGGGATGAAGTTGTTG 59.128 47.826 0.00 0.00 0.00 3.33
5132 5891 2.297597 GGACTGAGATACGGGGATGAAG 59.702 54.545 0.00 0.00 0.00 3.02
5138 5897 2.106857 ACTAGAGGACTGAGATACGGGG 59.893 54.545 0.00 0.00 0.00 5.73
5139 5898 3.495434 ACTAGAGGACTGAGATACGGG 57.505 52.381 0.00 0.00 0.00 5.28
5140 5899 7.879160 AGTATAAACTAGAGGACTGAGATACGG 59.121 40.741 0.00 0.00 32.84 4.02
5141 5900 8.836268 AGTATAAACTAGAGGACTGAGATACG 57.164 38.462 0.00 0.00 32.84 3.06
5144 5903 8.945193 AGAGAGTATAAACTAGAGGACTGAGAT 58.055 37.037 0.00 0.00 35.56 2.75
5145 5904 8.326765 AGAGAGTATAAACTAGAGGACTGAGA 57.673 38.462 0.00 0.00 35.56 3.27
5146 5905 8.429641 AGAGAGAGTATAAACTAGAGGACTGAG 58.570 40.741 0.00 0.00 35.56 3.35
5147 5906 8.208224 CAGAGAGAGTATAAACTAGAGGACTGA 58.792 40.741 0.00 0.00 35.56 3.41
5148 5907 7.990886 ACAGAGAGAGTATAAACTAGAGGACTG 59.009 40.741 0.00 0.00 35.56 3.51
5149 5908 8.097791 ACAGAGAGAGTATAAACTAGAGGACT 57.902 38.462 0.00 0.00 35.56 3.85
5150 5909 9.835389 TTACAGAGAGAGTATAAACTAGAGGAC 57.165 37.037 0.00 0.00 35.56 3.85
5151 5910 9.835389 GTTACAGAGAGAGTATAAACTAGAGGA 57.165 37.037 0.00 0.00 35.56 3.71
5152 5911 9.841295 AGTTACAGAGAGAGTATAAACTAGAGG 57.159 37.037 0.00 0.00 35.56 3.69
5203 5962 9.726438 ATGTTGCTAGTCTAAGTTACTTTCATT 57.274 29.630 1.94 0.00 0.00 2.57
5204 5963 9.155975 CATGTTGCTAGTCTAAGTTACTTTCAT 57.844 33.333 1.94 0.00 0.00 2.57
5207 5966 6.934645 TGCATGTTGCTAGTCTAAGTTACTTT 59.065 34.615 1.94 0.00 45.31 2.66
5208 5967 6.464222 TGCATGTTGCTAGTCTAAGTTACTT 58.536 36.000 2.32 2.32 45.31 2.24
5209 5968 6.037786 TGCATGTTGCTAGTCTAAGTTACT 57.962 37.500 0.75 0.00 45.31 2.24
5210 5969 6.910536 ATGCATGTTGCTAGTCTAAGTTAC 57.089 37.500 0.00 0.00 45.31 2.50
5211 5970 8.204160 ACATATGCATGTTGCTAGTCTAAGTTA 58.796 33.333 10.16 0.00 42.98 2.24
5212 5971 7.050377 ACATATGCATGTTGCTAGTCTAAGTT 58.950 34.615 10.16 0.00 42.98 2.66
5213 5972 6.586344 ACATATGCATGTTGCTAGTCTAAGT 58.414 36.000 10.16 0.00 42.98 2.24
5267 6026 8.400947 GCATGACATCACAAATATGTTACTTCT 58.599 33.333 0.00 0.00 37.82 2.85
5280 6039 3.631227 TGAAGTGTTGCATGACATCACAA 59.369 39.130 22.14 5.85 46.91 3.33
5310 6069 7.391148 ACCAAAATAAGATGCGTCTACAAAT 57.609 32.000 9.33 0.00 33.30 2.32
5344 6103 9.781834 TGAGTTAATAAACATGCTTTTTATCGG 57.218 29.630 0.00 0.00 38.12 4.18
5375 6134 7.578310 ATGCTTTGTATCTGTTTGATGCTAT 57.422 32.000 0.00 0.00 38.39 2.97
5383 6142 8.507249 GTCACTCTTTATGCTTTGTATCTGTTT 58.493 33.333 0.00 0.00 0.00 2.83
5385 6144 7.118390 GTGTCACTCTTTATGCTTTGTATCTGT 59.882 37.037 0.00 0.00 0.00 3.41
5387 6146 6.595716 GGTGTCACTCTTTATGCTTTGTATCT 59.404 38.462 2.35 0.00 0.00 1.98
5435 6194 0.384230 GTTCGTGCGATGGTTGTGTG 60.384 55.000 0.00 0.00 0.00 3.82
5441 6200 0.667487 CAGACTGTTCGTGCGATGGT 60.667 55.000 0.00 0.00 0.00 3.55
5447 6206 0.040958 CTTTGCCAGACTGTTCGTGC 60.041 55.000 0.93 0.00 0.00 5.34
5485 6244 5.186198 GGTCTCATATGGCTTTACTGTTGT 58.814 41.667 2.13 0.00 0.00 3.32
5491 6250 5.116882 AGTTTCGGTCTCATATGGCTTTAC 58.883 41.667 2.13 0.00 0.00 2.01
5518 6277 2.014857 CACCTTCTCCGTCGACATAGA 58.985 52.381 17.16 14.05 0.00 1.98
5539 6298 2.230025 CAGCATAATCTCCGGATCGAGT 59.770 50.000 3.57 0.89 0.00 4.18
5541 6300 1.067565 GCAGCATAATCTCCGGATCGA 60.068 52.381 3.57 0.00 0.00 3.59
5546 6305 0.886490 GGTGGCAGCATAATCTCCGG 60.886 60.000 12.58 0.00 0.00 5.14
5591 6350 3.700970 TGCGGTTGGAGCGGATGA 61.701 61.111 1.63 0.00 39.82 2.92
5594 6353 2.185867 GTATGCGGTTGGAGCGGA 59.814 61.111 1.63 0.00 44.66 5.54
5618 6377 4.862574 CGGAGTATCAATCGTTGTTCAAGA 59.137 41.667 0.00 0.00 36.25 3.02
5634 6393 5.989777 GTCTATTATGCACCAAACGGAGTAT 59.010 40.000 0.00 0.00 45.00 2.12
5644 6403 3.489568 CGTACGTGGTCTATTATGCACCA 60.490 47.826 7.22 0.00 37.89 4.17
5745 6766 3.932710 CTGCTTTACTATGGTCGCTTTGA 59.067 43.478 0.00 0.00 0.00 2.69
5820 6843 9.752961 CTTATGTGGCAATGATGATTTAATGAA 57.247 29.630 0.00 0.00 0.00 2.57
5847 6870 6.714810 ACATAAGGTTCAACTCAGCACATTTA 59.285 34.615 0.00 0.00 0.00 1.40
5887 6910 9.750783 AATGTCTTAGACTACCTACAGTAAGAA 57.249 33.333 13.86 0.00 29.34 2.52
5957 6981 2.110188 ACTAGAGGGCCGAGATATTGGA 59.890 50.000 9.71 0.00 0.00 3.53
5960 6984 7.183460 AGTATAAACTAGAGGGCCGAGATATT 58.817 38.462 9.71 0.81 32.84 1.28
6012 7036 2.569059 AGATTGGCATGAGGTGAATCG 58.431 47.619 0.00 0.00 30.38 3.34
6131 7155 5.692115 TCAATGGTGGTGTATGAGTATGT 57.308 39.130 0.00 0.00 0.00 2.29
6172 7196 1.155424 GCGTCGTGGTTGTGAGGAAA 61.155 55.000 0.00 0.00 0.00 3.13
6242 7834 2.095053 GCGCCTCTCTTTGAATCTGTTC 59.905 50.000 0.00 0.00 34.85 3.18
6261 7853 0.039074 AGAGACTTCGGTGTTGAGCG 60.039 55.000 0.00 0.00 44.61 5.03
6271 7863 2.989840 GTCATGTGTTCCAGAGACTTCG 59.010 50.000 0.00 0.00 32.30 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.