Multiple sequence alignment - TraesCS5A01G091100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G091100 | chr5A | 100.000 | 2426 | 0 | 0 | 1 | 2426 | 125229652 | 125227227 | 0.000000e+00 | 4481.0 |
1 | TraesCS5A01G091100 | chr5A | 93.626 | 1161 | 59 | 10 | 333 | 1487 | 692551853 | 692553004 | 0.000000e+00 | 1720.0 |
2 | TraesCS5A01G091100 | chr5A | 93.373 | 1162 | 61 | 11 | 333 | 1487 | 692545284 | 692546436 | 0.000000e+00 | 1705.0 |
3 | TraesCS5A01G091100 | chr5A | 91.964 | 112 | 8 | 1 | 1537 | 1647 | 577945956 | 577946067 | 3.230000e-34 | 156.0 |
4 | TraesCS5A01G091100 | chr5A | 91.209 | 91 | 8 | 0 | 150 | 240 | 575084574 | 575084664 | 9.110000e-25 | 124.0 |
5 | TraesCS5A01G091100 | chr5A | 89.691 | 97 | 9 | 1 | 1681 | 1777 | 452042193 | 452042098 | 3.280000e-24 | 122.0 |
6 | TraesCS5A01G091100 | chr5A | 87.500 | 80 | 10 | 0 | 150 | 229 | 685261567 | 685261488 | 2.570000e-15 | 93.5 |
7 | TraesCS5A01G091100 | chr7D | 93.557 | 1459 | 60 | 13 | 336 | 1775 | 617828530 | 617827087 | 0.000000e+00 | 2143.0 |
8 | TraesCS5A01G091100 | chr4D | 93.971 | 1161 | 56 | 10 | 333 | 1487 | 499725581 | 499726733 | 0.000000e+00 | 1744.0 |
9 | TraesCS5A01G091100 | chr4D | 93.621 | 1160 | 60 | 11 | 333 | 1487 | 508479473 | 508480623 | 0.000000e+00 | 1720.0 |
10 | TraesCS5A01G091100 | chr6B | 92.845 | 1160 | 70 | 8 | 333 | 1487 | 232744579 | 232745730 | 0.000000e+00 | 1670.0 |
11 | TraesCS5A01G091100 | chr7B | 92.826 | 1157 | 70 | 9 | 336 | 1487 | 707912337 | 707911189 | 0.000000e+00 | 1664.0 |
12 | TraesCS5A01G091100 | chr7B | 92.661 | 109 | 8 | 0 | 1539 | 1647 | 201497399 | 201497291 | 8.980000e-35 | 158.0 |
13 | TraesCS5A01G091100 | chr2B | 92.759 | 1160 | 70 | 10 | 333 | 1487 | 57500709 | 57501859 | 0.000000e+00 | 1664.0 |
14 | TraesCS5A01G091100 | chr2B | 91.892 | 111 | 9 | 0 | 1540 | 1650 | 167467679 | 167467789 | 3.230000e-34 | 156.0 |
15 | TraesCS5A01G091100 | chr2B | 80.625 | 160 | 26 | 5 | 149 | 305 | 296500826 | 296500669 | 4.240000e-23 | 119.0 |
16 | TraesCS5A01G091100 | chr3A | 92.414 | 1160 | 75 | 9 | 333 | 1487 | 424729205 | 424730356 | 0.000000e+00 | 1642.0 |
17 | TraesCS5A01G091100 | chr3A | 90.816 | 98 | 8 | 1 | 1683 | 1780 | 527572295 | 527572199 | 1.960000e-26 | 130.0 |
18 | TraesCS5A01G091100 | chr2A | 92.401 | 1158 | 71 | 12 | 336 | 1487 | 737417300 | 737416154 | 0.000000e+00 | 1635.0 |
19 | TraesCS5A01G091100 | chr2A | 86.726 | 226 | 25 | 5 | 1843 | 2066 | 762394548 | 762394326 | 1.860000e-61 | 246.0 |
20 | TraesCS5A01G091100 | chr2A | 92.568 | 148 | 11 | 0 | 1 | 148 | 762394780 | 762394633 | 1.890000e-51 | 213.0 |
21 | TraesCS5A01G091100 | chr2A | 97.778 | 90 | 2 | 0 | 1 | 90 | 59368689 | 59368778 | 3.230000e-34 | 156.0 |
22 | TraesCS5A01G091100 | chr2A | 92.500 | 80 | 6 | 0 | 150 | 229 | 349314108 | 349314187 | 5.480000e-22 | 115.0 |
23 | TraesCS5A01G091100 | chr2A | 82.963 | 135 | 15 | 8 | 154 | 284 | 568235452 | 568235322 | 5.480000e-22 | 115.0 |
24 | TraesCS5A01G091100 | chr2A | 94.828 | 58 | 3 | 0 | 158 | 215 | 661300675 | 661300732 | 9.240000e-15 | 91.6 |
25 | TraesCS5A01G091100 | chr1D | 98.464 | 651 | 9 | 1 | 1777 | 2426 | 256821024 | 256820374 | 0.000000e+00 | 1146.0 |
26 | TraesCS5A01G091100 | chr1D | 98.649 | 148 | 2 | 0 | 1 | 148 | 256821173 | 256821026 | 1.850000e-66 | 263.0 |
27 | TraesCS5A01G091100 | chr3B | 95.376 | 173 | 7 | 1 | 1606 | 1777 | 220885610 | 220885438 | 8.550000e-70 | 274.0 |
28 | TraesCS5A01G091100 | chr3B | 93.519 | 108 | 7 | 0 | 1540 | 1647 | 125619593 | 125619486 | 6.940000e-36 | 161.0 |
29 | TraesCS5A01G091100 | chrUn | 82.712 | 295 | 28 | 12 | 1777 | 2052 | 55127774 | 55127484 | 8.670000e-60 | 241.0 |
30 | TraesCS5A01G091100 | chrUn | 82.712 | 295 | 28 | 12 | 1777 | 2052 | 55136026 | 55135736 | 8.670000e-60 | 241.0 |
31 | TraesCS5A01G091100 | chrUn | 90.323 | 124 | 12 | 0 | 25 | 148 | 55127899 | 55127776 | 1.930000e-36 | 163.0 |
32 | TraesCS5A01G091100 | chrUn | 90.323 | 124 | 12 | 0 | 25 | 148 | 55136151 | 55136028 | 1.930000e-36 | 163.0 |
33 | TraesCS5A01G091100 | chr3D | 88.889 | 189 | 14 | 6 | 1843 | 2030 | 571040801 | 571040619 | 2.430000e-55 | 226.0 |
34 | TraesCS5A01G091100 | chr1B | 99.091 | 110 | 1 | 0 | 1 | 110 | 678858019 | 678858128 | 5.290000e-47 | 198.0 |
35 | TraesCS5A01G091100 | chr1B | 98.198 | 111 | 2 | 0 | 3 | 113 | 21642932 | 21642822 | 6.840000e-46 | 195.0 |
36 | TraesCS5A01G091100 | chr4B | 97.345 | 113 | 3 | 0 | 1 | 113 | 619967421 | 619967309 | 2.460000e-45 | 193.0 |
37 | TraesCS5A01G091100 | chr4B | 88.976 | 127 | 13 | 1 | 1533 | 1659 | 312267060 | 312267185 | 3.230000e-34 | 156.0 |
38 | TraesCS5A01G091100 | chr4B | 91.753 | 97 | 7 | 1 | 1681 | 1777 | 349112092 | 349112187 | 1.510000e-27 | 134.0 |
39 | TraesCS5A01G091100 | chr4B | 89.796 | 98 | 8 | 2 | 1681 | 1777 | 240141874 | 240141970 | 9.110000e-25 | 124.0 |
40 | TraesCS5A01G091100 | chr4B | 89.796 | 98 | 8 | 2 | 1681 | 1777 | 240184732 | 240184828 | 9.110000e-25 | 124.0 |
41 | TraesCS5A01G091100 | chr6A | 98.889 | 90 | 1 | 0 | 1 | 90 | 305758455 | 305758544 | 6.940000e-36 | 161.0 |
42 | TraesCS5A01G091100 | chr6A | 96.053 | 76 | 0 | 1 | 1415 | 1487 | 590671545 | 590671470 | 1.180000e-23 | 121.0 |
43 | TraesCS5A01G091100 | chr6A | 85.185 | 81 | 11 | 1 | 150 | 229 | 228971885 | 228971805 | 5.560000e-12 | 82.4 |
44 | TraesCS5A01G091100 | chr6A | 85.000 | 80 | 12 | 0 | 150 | 229 | 541766454 | 541766533 | 5.560000e-12 | 82.4 |
45 | TraesCS5A01G091100 | chr5B | 91.150 | 113 | 9 | 1 | 1540 | 1652 | 45943966 | 45943855 | 4.180000e-33 | 152.0 |
46 | TraesCS5A01G091100 | chr5B | 91.150 | 113 | 9 | 1 | 1536 | 1647 | 322861108 | 322860996 | 4.180000e-33 | 152.0 |
47 | TraesCS5A01G091100 | chr5B | 93.684 | 95 | 3 | 2 | 1681 | 1775 | 240592921 | 240592830 | 3.250000e-29 | 139.0 |
48 | TraesCS5A01G091100 | chr4A | 91.743 | 109 | 9 | 0 | 1540 | 1648 | 338511587 | 338511695 | 4.180000e-33 | 152.0 |
49 | TraesCS5A01G091100 | chr4A | 87.952 | 83 | 9 | 1 | 142 | 223 | 201122732 | 201122814 | 1.990000e-16 | 97.1 |
50 | TraesCS5A01G091100 | chr6D | 89.691 | 97 | 9 | 1 | 1681 | 1777 | 175431626 | 175431721 | 3.280000e-24 | 122.0 |
51 | TraesCS5A01G091100 | chr7A | 96.053 | 76 | 0 | 1 | 1415 | 1487 | 75362718 | 75362793 | 1.180000e-23 | 121.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G091100 | chr5A | 125227227 | 125229652 | 2425 | True | 4481.0 | 4481 | 100.0000 | 1 | 2426 | 1 | chr5A.!!$R1 | 2425 |
1 | TraesCS5A01G091100 | chr5A | 692551853 | 692553004 | 1151 | False | 1720.0 | 1720 | 93.6260 | 333 | 1487 | 1 | chr5A.!!$F4 | 1154 |
2 | TraesCS5A01G091100 | chr5A | 692545284 | 692546436 | 1152 | False | 1705.0 | 1705 | 93.3730 | 333 | 1487 | 1 | chr5A.!!$F3 | 1154 |
3 | TraesCS5A01G091100 | chr7D | 617827087 | 617828530 | 1443 | True | 2143.0 | 2143 | 93.5570 | 336 | 1775 | 1 | chr7D.!!$R1 | 1439 |
4 | TraesCS5A01G091100 | chr4D | 499725581 | 499726733 | 1152 | False | 1744.0 | 1744 | 93.9710 | 333 | 1487 | 1 | chr4D.!!$F1 | 1154 |
5 | TraesCS5A01G091100 | chr4D | 508479473 | 508480623 | 1150 | False | 1720.0 | 1720 | 93.6210 | 333 | 1487 | 1 | chr4D.!!$F2 | 1154 |
6 | TraesCS5A01G091100 | chr6B | 232744579 | 232745730 | 1151 | False | 1670.0 | 1670 | 92.8450 | 333 | 1487 | 1 | chr6B.!!$F1 | 1154 |
7 | TraesCS5A01G091100 | chr7B | 707911189 | 707912337 | 1148 | True | 1664.0 | 1664 | 92.8260 | 336 | 1487 | 1 | chr7B.!!$R2 | 1151 |
8 | TraesCS5A01G091100 | chr2B | 57500709 | 57501859 | 1150 | False | 1664.0 | 1664 | 92.7590 | 333 | 1487 | 1 | chr2B.!!$F1 | 1154 |
9 | TraesCS5A01G091100 | chr3A | 424729205 | 424730356 | 1151 | False | 1642.0 | 1642 | 92.4140 | 333 | 1487 | 1 | chr3A.!!$F1 | 1154 |
10 | TraesCS5A01G091100 | chr2A | 737416154 | 737417300 | 1146 | True | 1635.0 | 1635 | 92.4010 | 336 | 1487 | 1 | chr2A.!!$R2 | 1151 |
11 | TraesCS5A01G091100 | chr1D | 256820374 | 256821173 | 799 | True | 704.5 | 1146 | 98.5565 | 1 | 2426 | 2 | chr1D.!!$R1 | 2425 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
329 | 330 | 0.034477 | AATCCAACCCGCGATTCCTT | 60.034 | 50.0 | 8.23 | 0.0 | 0.0 | 3.36 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1756 | 1781 | 0.798009 | CTAGCAAAAATGCCCGTGCG | 60.798 | 55.0 | 0.0 | 0.0 | 41.9 | 5.34 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
46 | 47 | 6.466812 | TGAGTTGTATCTTCAATCTCTTGCA | 58.533 | 36.000 | 0.00 | 0.00 | 32.41 | 4.08 |
72 | 73 | 6.098124 | TCAATCAAGGGTTCAAATTGTCAAGT | 59.902 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
73 | 74 | 5.930837 | TCAAGGGTTCAAATTGTCAAGTT | 57.069 | 34.783 | 0.00 | 0.00 | 0.00 | 2.66 |
74 | 75 | 6.293004 | TCAAGGGTTCAAATTGTCAAGTTT | 57.707 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
75 | 76 | 6.706295 | TCAAGGGTTCAAATTGTCAAGTTTT | 58.294 | 32.000 | 0.00 | 0.00 | 0.00 | 2.43 |
76 | 77 | 7.841956 | TCAAGGGTTCAAATTGTCAAGTTTTA | 58.158 | 30.769 | 0.00 | 0.00 | 0.00 | 1.52 |
77 | 78 | 7.978975 | TCAAGGGTTCAAATTGTCAAGTTTTAG | 59.021 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
78 | 79 | 6.280643 | AGGGTTCAAATTGTCAAGTTTTAGC | 58.719 | 36.000 | 0.00 | 0.00 | 0.00 | 3.09 |
79 | 80 | 6.098266 | AGGGTTCAAATTGTCAAGTTTTAGCT | 59.902 | 34.615 | 0.00 | 0.00 | 0.00 | 3.32 |
80 | 81 | 6.200854 | GGGTTCAAATTGTCAAGTTTTAGCTG | 59.799 | 38.462 | 0.00 | 0.00 | 0.00 | 4.24 |
81 | 82 | 6.756542 | GGTTCAAATTGTCAAGTTTTAGCTGT | 59.243 | 34.615 | 0.00 | 0.00 | 0.00 | 4.40 |
82 | 83 | 7.254084 | GGTTCAAATTGTCAAGTTTTAGCTGTG | 60.254 | 37.037 | 0.00 | 0.00 | 0.00 | 3.66 |
83 | 84 | 7.094508 | TCAAATTGTCAAGTTTTAGCTGTGA | 57.905 | 32.000 | 0.00 | 0.00 | 0.00 | 3.58 |
84 | 85 | 7.195646 | TCAAATTGTCAAGTTTTAGCTGTGAG | 58.804 | 34.615 | 0.00 | 0.00 | 0.00 | 3.51 |
85 | 86 | 6.699575 | AATTGTCAAGTTTTAGCTGTGAGT | 57.300 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
86 | 87 | 5.484173 | TTGTCAAGTTTTAGCTGTGAGTG | 57.516 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
87 | 88 | 4.513442 | TGTCAAGTTTTAGCTGTGAGTGT | 58.487 | 39.130 | 0.00 | 0.00 | 0.00 | 3.55 |
88 | 89 | 5.666462 | TGTCAAGTTTTAGCTGTGAGTGTA | 58.334 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
89 | 90 | 5.753438 | TGTCAAGTTTTAGCTGTGAGTGTAG | 59.247 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
90 | 91 | 5.177696 | GTCAAGTTTTAGCTGTGAGTGTAGG | 59.822 | 44.000 | 0.00 | 0.00 | 0.00 | 3.18 |
91 | 92 | 5.069914 | TCAAGTTTTAGCTGTGAGTGTAGGA | 59.930 | 40.000 | 0.00 | 0.00 | 0.00 | 2.94 |
92 | 93 | 5.546621 | AGTTTTAGCTGTGAGTGTAGGAA | 57.453 | 39.130 | 0.00 | 0.00 | 0.00 | 3.36 |
93 | 94 | 5.925509 | AGTTTTAGCTGTGAGTGTAGGAAA | 58.074 | 37.500 | 0.00 | 0.00 | 0.00 | 3.13 |
94 | 95 | 5.992217 | AGTTTTAGCTGTGAGTGTAGGAAAG | 59.008 | 40.000 | 0.00 | 0.00 | 0.00 | 2.62 |
95 | 96 | 5.801531 | TTTAGCTGTGAGTGTAGGAAAGA | 57.198 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
96 | 97 | 5.801531 | TTAGCTGTGAGTGTAGGAAAGAA | 57.198 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
97 | 98 | 3.996480 | AGCTGTGAGTGTAGGAAAGAAC | 58.004 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
98 | 99 | 3.067833 | GCTGTGAGTGTAGGAAAGAACC | 58.932 | 50.000 | 0.00 | 0.00 | 0.00 | 3.62 |
99 | 100 | 3.494398 | GCTGTGAGTGTAGGAAAGAACCA | 60.494 | 47.826 | 0.00 | 0.00 | 0.00 | 3.67 |
100 | 101 | 4.804261 | GCTGTGAGTGTAGGAAAGAACCAT | 60.804 | 45.833 | 0.00 | 0.00 | 0.00 | 3.55 |
101 | 102 | 5.568825 | GCTGTGAGTGTAGGAAAGAACCATA | 60.569 | 44.000 | 0.00 | 0.00 | 0.00 | 2.74 |
102 | 103 | 6.428083 | TGTGAGTGTAGGAAAGAACCATAA | 57.572 | 37.500 | 0.00 | 0.00 | 0.00 | 1.90 |
103 | 104 | 7.016153 | TGTGAGTGTAGGAAAGAACCATAAT | 57.984 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
104 | 105 | 7.103641 | TGTGAGTGTAGGAAAGAACCATAATC | 58.896 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
105 | 106 | 7.103641 | GTGAGTGTAGGAAAGAACCATAATCA | 58.896 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
106 | 107 | 7.606456 | GTGAGTGTAGGAAAGAACCATAATCAA | 59.394 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
107 | 108 | 8.160765 | TGAGTGTAGGAAAGAACCATAATCAAA | 58.839 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
108 | 109 | 8.336801 | AGTGTAGGAAAGAACCATAATCAAAC | 57.663 | 34.615 | 0.00 | 0.00 | 0.00 | 2.93 |
109 | 110 | 7.119262 | AGTGTAGGAAAGAACCATAATCAAACG | 59.881 | 37.037 | 0.00 | 0.00 | 0.00 | 3.60 |
110 | 111 | 7.118680 | GTGTAGGAAAGAACCATAATCAAACGA | 59.881 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
111 | 112 | 6.743575 | AGGAAAGAACCATAATCAAACGAG | 57.256 | 37.500 | 0.00 | 0.00 | 0.00 | 4.18 |
112 | 113 | 5.648092 | AGGAAAGAACCATAATCAAACGAGG | 59.352 | 40.000 | 0.00 | 0.00 | 0.00 | 4.63 |
113 | 114 | 4.965119 | AAGAACCATAATCAAACGAGGC | 57.035 | 40.909 | 0.00 | 0.00 | 0.00 | 4.70 |
114 | 115 | 4.222124 | AGAACCATAATCAAACGAGGCT | 57.778 | 40.909 | 0.00 | 0.00 | 0.00 | 4.58 |
115 | 116 | 3.941483 | AGAACCATAATCAAACGAGGCTG | 59.059 | 43.478 | 0.00 | 0.00 | 0.00 | 4.85 |
116 | 117 | 3.627395 | ACCATAATCAAACGAGGCTGA | 57.373 | 42.857 | 0.00 | 0.00 | 0.00 | 4.26 |
117 | 118 | 3.535561 | ACCATAATCAAACGAGGCTGAG | 58.464 | 45.455 | 0.00 | 0.00 | 0.00 | 3.35 |
118 | 119 | 3.055094 | ACCATAATCAAACGAGGCTGAGT | 60.055 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
119 | 120 | 3.941483 | CCATAATCAAACGAGGCTGAGTT | 59.059 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
120 | 121 | 4.201851 | CCATAATCAAACGAGGCTGAGTTG | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
121 | 122 | 1.813513 | ATCAAACGAGGCTGAGTTGG | 58.186 | 50.000 | 0.00 | 0.00 | 0.00 | 3.77 |
122 | 123 | 0.756294 | TCAAACGAGGCTGAGTTGGA | 59.244 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
123 | 124 | 1.347707 | TCAAACGAGGCTGAGTTGGAT | 59.652 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
124 | 125 | 1.466167 | CAAACGAGGCTGAGTTGGATG | 59.534 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
125 | 126 | 0.687354 | AACGAGGCTGAGTTGGATGT | 59.313 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
126 | 127 | 1.557099 | ACGAGGCTGAGTTGGATGTA | 58.443 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
127 | 128 | 1.204941 | ACGAGGCTGAGTTGGATGTAC | 59.795 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
128 | 129 | 1.204704 | CGAGGCTGAGTTGGATGTACA | 59.795 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
129 | 130 | 2.736719 | CGAGGCTGAGTTGGATGTACAG | 60.737 | 54.545 | 0.33 | 0.00 | 0.00 | 2.74 |
130 | 131 | 1.556911 | AGGCTGAGTTGGATGTACAGG | 59.443 | 52.381 | 0.33 | 0.00 | 0.00 | 4.00 |
131 | 132 | 1.407437 | GGCTGAGTTGGATGTACAGGG | 60.407 | 57.143 | 0.33 | 0.00 | 0.00 | 4.45 |
132 | 133 | 1.555075 | GCTGAGTTGGATGTACAGGGA | 59.445 | 52.381 | 0.33 | 0.00 | 0.00 | 4.20 |
133 | 134 | 2.027192 | GCTGAGTTGGATGTACAGGGAA | 60.027 | 50.000 | 0.33 | 0.00 | 0.00 | 3.97 |
134 | 135 | 3.559171 | GCTGAGTTGGATGTACAGGGAAA | 60.559 | 47.826 | 0.33 | 0.00 | 0.00 | 3.13 |
135 | 136 | 4.651778 | CTGAGTTGGATGTACAGGGAAAA | 58.348 | 43.478 | 0.33 | 0.00 | 0.00 | 2.29 |
136 | 137 | 5.255397 | TGAGTTGGATGTACAGGGAAAAT | 57.745 | 39.130 | 0.33 | 0.00 | 0.00 | 1.82 |
137 | 138 | 6.381498 | TGAGTTGGATGTACAGGGAAAATA | 57.619 | 37.500 | 0.33 | 0.00 | 0.00 | 1.40 |
138 | 139 | 6.414732 | TGAGTTGGATGTACAGGGAAAATAG | 58.585 | 40.000 | 0.33 | 0.00 | 0.00 | 1.73 |
139 | 140 | 6.214615 | TGAGTTGGATGTACAGGGAAAATAGA | 59.785 | 38.462 | 0.33 | 0.00 | 0.00 | 1.98 |
140 | 141 | 6.653989 | AGTTGGATGTACAGGGAAAATAGAG | 58.346 | 40.000 | 0.33 | 0.00 | 0.00 | 2.43 |
141 | 142 | 6.215636 | AGTTGGATGTACAGGGAAAATAGAGT | 59.784 | 38.462 | 0.33 | 0.00 | 0.00 | 3.24 |
142 | 143 | 5.989477 | TGGATGTACAGGGAAAATAGAGTG | 58.011 | 41.667 | 0.33 | 0.00 | 0.00 | 3.51 |
143 | 144 | 4.816925 | GGATGTACAGGGAAAATAGAGTGC | 59.183 | 45.833 | 0.33 | 0.00 | 0.00 | 4.40 |
144 | 145 | 5.396884 | GGATGTACAGGGAAAATAGAGTGCT | 60.397 | 44.000 | 0.33 | 0.00 | 0.00 | 4.40 |
145 | 146 | 5.086104 | TGTACAGGGAAAATAGAGTGCTC | 57.914 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
146 | 147 | 4.530553 | TGTACAGGGAAAATAGAGTGCTCA | 59.469 | 41.667 | 0.00 | 0.00 | 0.00 | 4.26 |
147 | 148 | 4.851639 | ACAGGGAAAATAGAGTGCTCAT | 57.148 | 40.909 | 1.82 | 0.00 | 0.00 | 2.90 |
148 | 149 | 4.521146 | ACAGGGAAAATAGAGTGCTCATG | 58.479 | 43.478 | 1.82 | 0.00 | 0.00 | 3.07 |
149 | 150 | 4.018960 | ACAGGGAAAATAGAGTGCTCATGT | 60.019 | 41.667 | 1.82 | 0.00 | 0.00 | 3.21 |
150 | 151 | 4.574013 | CAGGGAAAATAGAGTGCTCATGTC | 59.426 | 45.833 | 1.82 | 0.00 | 0.00 | 3.06 |
151 | 152 | 4.472833 | AGGGAAAATAGAGTGCTCATGTCT | 59.527 | 41.667 | 1.82 | 0.00 | 0.00 | 3.41 |
152 | 153 | 5.045286 | AGGGAAAATAGAGTGCTCATGTCTT | 60.045 | 40.000 | 1.82 | 0.00 | 0.00 | 3.01 |
153 | 154 | 5.649831 | GGGAAAATAGAGTGCTCATGTCTTT | 59.350 | 40.000 | 1.82 | 0.00 | 0.00 | 2.52 |
154 | 155 | 6.183360 | GGGAAAATAGAGTGCTCATGTCTTTC | 60.183 | 42.308 | 1.82 | 3.78 | 0.00 | 2.62 |
155 | 156 | 6.183360 | GGAAAATAGAGTGCTCATGTCTTTCC | 60.183 | 42.308 | 1.82 | 8.18 | 0.00 | 3.13 |
156 | 157 | 2.777832 | AGAGTGCTCATGTCTTTCCC | 57.222 | 50.000 | 1.82 | 0.00 | 0.00 | 3.97 |
157 | 158 | 2.264455 | AGAGTGCTCATGTCTTTCCCT | 58.736 | 47.619 | 1.82 | 0.00 | 0.00 | 4.20 |
158 | 159 | 3.445008 | AGAGTGCTCATGTCTTTCCCTA | 58.555 | 45.455 | 1.82 | 0.00 | 0.00 | 3.53 |
159 | 160 | 3.840666 | AGAGTGCTCATGTCTTTCCCTAA | 59.159 | 43.478 | 1.82 | 0.00 | 0.00 | 2.69 |
160 | 161 | 4.472833 | AGAGTGCTCATGTCTTTCCCTAAT | 59.527 | 41.667 | 1.82 | 0.00 | 0.00 | 1.73 |
161 | 162 | 5.663106 | AGAGTGCTCATGTCTTTCCCTAATA | 59.337 | 40.000 | 1.82 | 0.00 | 0.00 | 0.98 |
162 | 163 | 6.156949 | AGAGTGCTCATGTCTTTCCCTAATAA | 59.843 | 38.462 | 1.82 | 0.00 | 0.00 | 1.40 |
163 | 164 | 6.904626 | AGTGCTCATGTCTTTCCCTAATAAT | 58.095 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
164 | 165 | 8.034313 | AGTGCTCATGTCTTTCCCTAATAATA | 57.966 | 34.615 | 0.00 | 0.00 | 0.00 | 0.98 |
165 | 166 | 8.494433 | AGTGCTCATGTCTTTCCCTAATAATAA | 58.506 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
166 | 167 | 9.120538 | GTGCTCATGTCTTTCCCTAATAATAAA | 57.879 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
167 | 168 | 9.342308 | TGCTCATGTCTTTCCCTAATAATAAAG | 57.658 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
168 | 169 | 8.293157 | GCTCATGTCTTTCCCTAATAATAAAGC | 58.707 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
169 | 170 | 9.342308 | CTCATGTCTTTCCCTAATAATAAAGCA | 57.658 | 33.333 | 0.00 | 0.00 | 0.00 | 3.91 |
170 | 171 | 9.120538 | TCATGTCTTTCCCTAATAATAAAGCAC | 57.879 | 33.333 | 0.00 | 0.00 | 0.00 | 4.40 |
171 | 172 | 7.548196 | TGTCTTTCCCTAATAATAAAGCACG | 57.452 | 36.000 | 0.00 | 0.00 | 0.00 | 5.34 |
172 | 173 | 7.332557 | TGTCTTTCCCTAATAATAAAGCACGA | 58.667 | 34.615 | 0.00 | 0.00 | 0.00 | 4.35 |
173 | 174 | 7.825270 | TGTCTTTCCCTAATAATAAAGCACGAA | 59.175 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
174 | 175 | 8.837389 | GTCTTTCCCTAATAATAAAGCACGAAT | 58.163 | 33.333 | 0.00 | 0.00 | 0.00 | 3.34 |
175 | 176 | 9.403583 | TCTTTCCCTAATAATAAAGCACGAATT | 57.596 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
176 | 177 | 9.450807 | CTTTCCCTAATAATAAAGCACGAATTG | 57.549 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
177 | 178 | 8.740123 | TTCCCTAATAATAAAGCACGAATTGA | 57.260 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
178 | 179 | 8.378172 | TCCCTAATAATAAAGCACGAATTGAG | 57.622 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
179 | 180 | 7.990886 | TCCCTAATAATAAAGCACGAATTGAGT | 59.009 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
180 | 181 | 8.283291 | CCCTAATAATAAAGCACGAATTGAGTC | 58.717 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
181 | 182 | 9.046296 | CCTAATAATAAAGCACGAATTGAGTCT | 57.954 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
183 | 184 | 5.803020 | AATAAAGCACGAATTGAGTCTCC | 57.197 | 39.130 | 0.00 | 0.00 | 0.00 | 3.71 |
184 | 185 | 1.714794 | AAGCACGAATTGAGTCTCCG | 58.285 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
185 | 186 | 0.108615 | AGCACGAATTGAGTCTCCGG | 60.109 | 55.000 | 0.00 | 0.00 | 0.00 | 5.14 |
186 | 187 | 1.084370 | GCACGAATTGAGTCTCCGGG | 61.084 | 60.000 | 0.00 | 0.00 | 0.00 | 5.73 |
187 | 188 | 0.246635 | CACGAATTGAGTCTCCGGGT | 59.753 | 55.000 | 0.00 | 0.00 | 0.00 | 5.28 |
188 | 189 | 0.974383 | ACGAATTGAGTCTCCGGGTT | 59.026 | 50.000 | 0.00 | 0.00 | 0.00 | 4.11 |
189 | 190 | 1.067071 | ACGAATTGAGTCTCCGGGTTC | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 3.62 |
190 | 191 | 1.067142 | CGAATTGAGTCTCCGGGTTCA | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
191 | 192 | 2.347731 | GAATTGAGTCTCCGGGTTCAC | 58.652 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
192 | 193 | 1.645710 | ATTGAGTCTCCGGGTTCACT | 58.354 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
193 | 194 | 0.679505 | TTGAGTCTCCGGGTTCACTG | 59.320 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
194 | 195 | 0.469331 | TGAGTCTCCGGGTTCACTGT | 60.469 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
195 | 196 | 0.244178 | GAGTCTCCGGGTTCACTGTC | 59.756 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
196 | 197 | 1.080705 | GTCTCCGGGTTCACTGTCG | 60.081 | 63.158 | 0.00 | 0.00 | 0.00 | 4.35 |
197 | 198 | 2.432628 | CTCCGGGTTCACTGTCGC | 60.433 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
198 | 199 | 4.351938 | TCCGGGTTCACTGTCGCG | 62.352 | 66.667 | 0.00 | 0.00 | 39.16 | 5.87 |
201 | 202 | 4.980805 | GGGTTCACTGTCGCGGCA | 62.981 | 66.667 | 14.98 | 14.98 | 0.00 | 5.69 |
202 | 203 | 2.742372 | GGTTCACTGTCGCGGCAT | 60.742 | 61.111 | 16.48 | 1.01 | 0.00 | 4.40 |
203 | 204 | 2.325082 | GGTTCACTGTCGCGGCATT | 61.325 | 57.895 | 16.48 | 5.51 | 0.00 | 3.56 |
204 | 205 | 1.574428 | GTTCACTGTCGCGGCATTT | 59.426 | 52.632 | 16.48 | 0.16 | 0.00 | 2.32 |
205 | 206 | 0.040425 | GTTCACTGTCGCGGCATTTT | 60.040 | 50.000 | 16.48 | 0.00 | 0.00 | 1.82 |
206 | 207 | 0.665835 | TTCACTGTCGCGGCATTTTT | 59.334 | 45.000 | 16.48 | 0.00 | 0.00 | 1.94 |
207 | 208 | 1.514003 | TCACTGTCGCGGCATTTTTA | 58.486 | 45.000 | 16.48 | 0.00 | 0.00 | 1.52 |
208 | 209 | 1.195900 | TCACTGTCGCGGCATTTTTAC | 59.804 | 47.619 | 16.48 | 0.00 | 0.00 | 2.01 |
209 | 210 | 1.069568 | CACTGTCGCGGCATTTTTACA | 60.070 | 47.619 | 16.48 | 2.89 | 0.00 | 2.41 |
210 | 211 | 1.069500 | ACTGTCGCGGCATTTTTACAC | 60.069 | 47.619 | 16.48 | 0.00 | 0.00 | 2.90 |
211 | 212 | 0.945099 | TGTCGCGGCATTTTTACACA | 59.055 | 45.000 | 10.57 | 0.00 | 0.00 | 3.72 |
212 | 213 | 1.333931 | TGTCGCGGCATTTTTACACAA | 59.666 | 42.857 | 10.57 | 0.00 | 0.00 | 3.33 |
213 | 214 | 2.223502 | TGTCGCGGCATTTTTACACAAA | 60.224 | 40.909 | 10.57 | 0.00 | 0.00 | 2.83 |
214 | 215 | 2.403698 | GTCGCGGCATTTTTACACAAAG | 59.596 | 45.455 | 5.47 | 0.00 | 0.00 | 2.77 |
215 | 216 | 1.718711 | CGCGGCATTTTTACACAAAGG | 59.281 | 47.619 | 0.00 | 0.00 | 0.00 | 3.11 |
216 | 217 | 2.749776 | GCGGCATTTTTACACAAAGGT | 58.250 | 42.857 | 0.00 | 0.00 | 0.00 | 3.50 |
217 | 218 | 2.729360 | GCGGCATTTTTACACAAAGGTC | 59.271 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
218 | 219 | 3.313690 | CGGCATTTTTACACAAAGGTCC | 58.686 | 45.455 | 0.00 | 0.00 | 0.00 | 4.46 |
219 | 220 | 3.243569 | CGGCATTTTTACACAAAGGTCCA | 60.244 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
220 | 221 | 4.560513 | CGGCATTTTTACACAAAGGTCCAT | 60.561 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
221 | 222 | 4.690280 | GGCATTTTTACACAAAGGTCCATG | 59.310 | 41.667 | 0.00 | 0.00 | 0.00 | 3.66 |
222 | 223 | 5.296748 | GCATTTTTACACAAAGGTCCATGT | 58.703 | 37.500 | 0.00 | 0.00 | 0.00 | 3.21 |
228 | 229 | 3.457610 | CACAAAGGTCCATGTGCTTTT | 57.542 | 42.857 | 13.10 | 0.00 | 40.32 | 2.27 |
229 | 230 | 3.125316 | CACAAAGGTCCATGTGCTTTTG | 58.875 | 45.455 | 13.10 | 15.02 | 40.32 | 2.44 |
230 | 231 | 2.102925 | ACAAAGGTCCATGTGCTTTTGG | 59.897 | 45.455 | 18.45 | 0.00 | 31.64 | 3.28 |
231 | 232 | 1.341080 | AAGGTCCATGTGCTTTTGGG | 58.659 | 50.000 | 0.00 | 0.00 | 33.62 | 4.12 |
232 | 233 | 0.542702 | AGGTCCATGTGCTTTTGGGG | 60.543 | 55.000 | 0.00 | 0.00 | 33.62 | 4.96 |
233 | 234 | 0.541764 | GGTCCATGTGCTTTTGGGGA | 60.542 | 55.000 | 0.00 | 0.00 | 33.62 | 4.81 |
234 | 235 | 1.337118 | GTCCATGTGCTTTTGGGGAA | 58.663 | 50.000 | 0.00 | 0.00 | 33.62 | 3.97 |
235 | 236 | 1.901833 | GTCCATGTGCTTTTGGGGAAT | 59.098 | 47.619 | 0.00 | 0.00 | 33.62 | 3.01 |
236 | 237 | 2.302733 | GTCCATGTGCTTTTGGGGAATT | 59.697 | 45.455 | 0.00 | 0.00 | 33.62 | 2.17 |
237 | 238 | 3.513515 | GTCCATGTGCTTTTGGGGAATTA | 59.486 | 43.478 | 0.00 | 0.00 | 33.62 | 1.40 |
238 | 239 | 4.020662 | GTCCATGTGCTTTTGGGGAATTAA | 60.021 | 41.667 | 0.00 | 0.00 | 33.62 | 1.40 |
239 | 240 | 4.020662 | TCCATGTGCTTTTGGGGAATTAAC | 60.021 | 41.667 | 0.00 | 0.00 | 33.62 | 2.01 |
240 | 241 | 4.262808 | CCATGTGCTTTTGGGGAATTAACA | 60.263 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
241 | 242 | 4.329462 | TGTGCTTTTGGGGAATTAACAC | 57.671 | 40.909 | 0.00 | 0.00 | 0.00 | 3.32 |
242 | 243 | 3.243569 | TGTGCTTTTGGGGAATTAACACG | 60.244 | 43.478 | 0.00 | 0.00 | 0.00 | 4.49 |
243 | 244 | 2.959707 | TGCTTTTGGGGAATTAACACGT | 59.040 | 40.909 | 0.00 | 0.00 | 0.00 | 4.49 |
244 | 245 | 3.004944 | TGCTTTTGGGGAATTAACACGTC | 59.995 | 43.478 | 0.00 | 0.00 | 0.00 | 4.34 |
245 | 246 | 3.817238 | CTTTTGGGGAATTAACACGTCG | 58.183 | 45.455 | 0.00 | 0.00 | 0.00 | 5.12 |
246 | 247 | 2.547299 | TTGGGGAATTAACACGTCGT | 57.453 | 45.000 | 0.00 | 0.00 | 0.00 | 4.34 |
247 | 248 | 2.083167 | TGGGGAATTAACACGTCGTC | 57.917 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
248 | 249 | 1.338011 | TGGGGAATTAACACGTCGTCC | 60.338 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
249 | 250 | 1.362768 | GGGAATTAACACGTCGTCCC | 58.637 | 55.000 | 0.00 | 0.00 | 38.12 | 4.46 |
250 | 251 | 1.066645 | GGGAATTAACACGTCGTCCCT | 60.067 | 52.381 | 8.43 | 0.00 | 41.37 | 4.20 |
251 | 252 | 2.265683 | GGAATTAACACGTCGTCCCTC | 58.734 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
252 | 253 | 2.094338 | GGAATTAACACGTCGTCCCTCT | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
253 | 254 | 3.582780 | GAATTAACACGTCGTCCCTCTT | 58.417 | 45.455 | 0.00 | 0.00 | 0.00 | 2.85 |
254 | 255 | 3.672767 | ATTAACACGTCGTCCCTCTTT | 57.327 | 42.857 | 0.00 | 0.00 | 0.00 | 2.52 |
255 | 256 | 4.789012 | ATTAACACGTCGTCCCTCTTTA | 57.211 | 40.909 | 0.00 | 0.00 | 0.00 | 1.85 |
256 | 257 | 4.582701 | TTAACACGTCGTCCCTCTTTAA | 57.417 | 40.909 | 0.00 | 0.00 | 0.00 | 1.52 |
257 | 258 | 2.719426 | ACACGTCGTCCCTCTTTAAG | 57.281 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
258 | 259 | 1.959282 | ACACGTCGTCCCTCTTTAAGT | 59.041 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
259 | 260 | 2.030451 | ACACGTCGTCCCTCTTTAAGTC | 60.030 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
260 | 261 | 1.198637 | ACGTCGTCCCTCTTTAAGTCG | 59.801 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
261 | 262 | 1.466167 | CGTCGTCCCTCTTTAAGTCGA | 59.534 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
262 | 263 | 2.097142 | CGTCGTCCCTCTTTAAGTCGAT | 59.903 | 50.000 | 0.00 | 0.00 | 0.00 | 3.59 |
263 | 264 | 3.693654 | GTCGTCCCTCTTTAAGTCGATC | 58.306 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
264 | 265 | 3.377798 | GTCGTCCCTCTTTAAGTCGATCT | 59.622 | 47.826 | 0.00 | 0.00 | 0.00 | 2.75 |
265 | 266 | 4.574013 | GTCGTCCCTCTTTAAGTCGATCTA | 59.426 | 45.833 | 0.00 | 0.00 | 0.00 | 1.98 |
266 | 267 | 5.065731 | GTCGTCCCTCTTTAAGTCGATCTAA | 59.934 | 44.000 | 0.00 | 0.00 | 0.00 | 2.10 |
267 | 268 | 5.296283 | TCGTCCCTCTTTAAGTCGATCTAAG | 59.704 | 44.000 | 0.00 | 0.00 | 0.00 | 2.18 |
268 | 269 | 5.296283 | CGTCCCTCTTTAAGTCGATCTAAGA | 59.704 | 44.000 | 0.00 | 0.00 | 0.00 | 2.10 |
269 | 270 | 6.183360 | CGTCCCTCTTTAAGTCGATCTAAGAA | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 2.52 |
270 | 271 | 7.545489 | GTCCCTCTTTAAGTCGATCTAAGAAA | 58.455 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
271 | 272 | 8.033626 | GTCCCTCTTTAAGTCGATCTAAGAAAA | 58.966 | 37.037 | 0.00 | 0.00 | 0.00 | 2.29 |
272 | 273 | 8.759782 | TCCCTCTTTAAGTCGATCTAAGAAAAT | 58.240 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
273 | 274 | 8.821894 | CCCTCTTTAAGTCGATCTAAGAAAATG | 58.178 | 37.037 | 0.00 | 0.00 | 0.00 | 2.32 |
274 | 275 | 9.372369 | CCTCTTTAAGTCGATCTAAGAAAATGT | 57.628 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
314 | 315 | 5.830000 | AAACCCTGCGTTTATAAGAATCC | 57.170 | 39.130 | 0.00 | 0.00 | 43.03 | 3.01 |
315 | 316 | 4.497291 | ACCCTGCGTTTATAAGAATCCA | 57.503 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
316 | 317 | 4.850680 | ACCCTGCGTTTATAAGAATCCAA | 58.149 | 39.130 | 0.00 | 0.00 | 0.00 | 3.53 |
317 | 318 | 4.638865 | ACCCTGCGTTTATAAGAATCCAAC | 59.361 | 41.667 | 0.00 | 0.00 | 0.00 | 3.77 |
318 | 319 | 4.036380 | CCCTGCGTTTATAAGAATCCAACC | 59.964 | 45.833 | 0.00 | 0.00 | 0.00 | 3.77 |
319 | 320 | 4.036380 | CCTGCGTTTATAAGAATCCAACCC | 59.964 | 45.833 | 0.00 | 0.00 | 0.00 | 4.11 |
320 | 321 | 3.623960 | TGCGTTTATAAGAATCCAACCCG | 59.376 | 43.478 | 0.00 | 0.00 | 0.00 | 5.28 |
321 | 322 | 3.547413 | GCGTTTATAAGAATCCAACCCGC | 60.547 | 47.826 | 0.00 | 0.00 | 0.00 | 6.13 |
322 | 323 | 3.302870 | CGTTTATAAGAATCCAACCCGCG | 60.303 | 47.826 | 0.00 | 0.00 | 0.00 | 6.46 |
323 | 324 | 3.823281 | TTATAAGAATCCAACCCGCGA | 57.177 | 42.857 | 8.23 | 0.00 | 0.00 | 5.87 |
324 | 325 | 2.930826 | ATAAGAATCCAACCCGCGAT | 57.069 | 45.000 | 8.23 | 0.00 | 0.00 | 4.58 |
325 | 326 | 2.702592 | TAAGAATCCAACCCGCGATT | 57.297 | 45.000 | 8.23 | 0.00 | 0.00 | 3.34 |
326 | 327 | 1.379527 | AAGAATCCAACCCGCGATTC | 58.620 | 50.000 | 8.23 | 7.84 | 43.07 | 2.52 |
327 | 328 | 0.463833 | AGAATCCAACCCGCGATTCC | 60.464 | 55.000 | 8.23 | 0.00 | 43.54 | 3.01 |
328 | 329 | 0.463833 | GAATCCAACCCGCGATTCCT | 60.464 | 55.000 | 8.23 | 0.00 | 38.86 | 3.36 |
329 | 330 | 0.034477 | AATCCAACCCGCGATTCCTT | 60.034 | 50.000 | 8.23 | 0.00 | 0.00 | 3.36 |
330 | 331 | 0.034477 | ATCCAACCCGCGATTCCTTT | 60.034 | 50.000 | 8.23 | 0.00 | 0.00 | 3.11 |
331 | 332 | 0.250989 | TCCAACCCGCGATTCCTTTT | 60.251 | 50.000 | 8.23 | 0.00 | 0.00 | 2.27 |
334 | 335 | 1.092348 | AACCCGCGATTCCTTTTAGC | 58.908 | 50.000 | 8.23 | 0.00 | 0.00 | 3.09 |
386 | 387 | 5.121142 | CCATTGCACTAATCTTTTGCTTTGG | 59.879 | 40.000 | 0.00 | 0.00 | 37.16 | 3.28 |
400 | 401 | 1.735700 | GCTTTGGGCGATTGGCTAAAC | 60.736 | 52.381 | 13.24 | 7.73 | 44.32 | 2.01 |
435 | 436 | 5.335583 | CCTTTGGAATAATCTTTCGTGCACA | 60.336 | 40.000 | 18.64 | 0.81 | 0.00 | 4.57 |
530 | 531 | 5.645056 | TGCCCTTGGATAAATCACTCATA | 57.355 | 39.130 | 0.00 | 0.00 | 0.00 | 2.15 |
582 | 584 | 3.494626 | TGCTCACGAGAACAGAAACATTC | 59.505 | 43.478 | 0.00 | 0.00 | 0.00 | 2.67 |
781 | 784 | 6.640518 | TCTATGCTCACTAGAACGGAAAAAT | 58.359 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
782 | 785 | 7.778083 | TCTATGCTCACTAGAACGGAAAAATA | 58.222 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
783 | 786 | 8.421784 | TCTATGCTCACTAGAACGGAAAAATAT | 58.578 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
809 | 812 | 5.900339 | TTATCTGCTTATTTTAGCGTCGG | 57.100 | 39.130 | 0.00 | 0.00 | 44.18 | 4.79 |
876 | 880 | 4.579869 | TGCCCTTCTCTGTCAAACTTATC | 58.420 | 43.478 | 0.00 | 0.00 | 0.00 | 1.75 |
937 | 941 | 6.169800 | TGCGCTTCTTTGGCACATATATATA | 58.830 | 36.000 | 9.73 | 0.00 | 39.30 | 0.86 |
938 | 942 | 6.823182 | TGCGCTTCTTTGGCACATATATATAT | 59.177 | 34.615 | 9.73 | 0.00 | 39.30 | 0.86 |
1143 | 1154 | 5.399858 | CAATCAGTTCAAGCAATTCTCAGG | 58.600 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
1325 | 1337 | 6.750039 | CGTTTTAACATGGACACTTCAAAAGT | 59.250 | 34.615 | 0.00 | 0.00 | 44.06 | 2.66 |
1336 | 1348 | 6.037610 | GGACACTTCAAAAGTATATCTGCCAG | 59.962 | 42.308 | 0.00 | 0.00 | 40.46 | 4.85 |
1409 | 1431 | 2.679355 | TTGCGTTCACATGTAGTTGC | 57.321 | 45.000 | 0.00 | 1.45 | 0.00 | 4.17 |
1410 | 1432 | 1.587547 | TGCGTTCACATGTAGTTGCA | 58.412 | 45.000 | 0.00 | 4.39 | 0.00 | 4.08 |
1531 | 1556 | 8.965172 | GCAATAGCAACTGATATCTGAATTTTG | 58.035 | 33.333 | 15.75 | 10.41 | 41.58 | 2.44 |
1548 | 1573 | 8.463930 | TGAATTTTGTTTGATGTACTTCCTCT | 57.536 | 30.769 | 6.32 | 0.00 | 0.00 | 3.69 |
1557 | 1582 | 6.174720 | TGATGTACTTCCTCTGTTCACTTT | 57.825 | 37.500 | 6.32 | 0.00 | 0.00 | 2.66 |
1569 | 1594 | 9.403583 | TCCTCTGTTCACTTTTATAAGTTGTTT | 57.596 | 29.630 | 0.00 | 0.00 | 41.85 | 2.83 |
1597 | 1622 | 7.333921 | AGACAAATGAAATTGAGTTGTTTTGCA | 59.666 | 29.630 | 0.00 | 0.00 | 36.10 | 4.08 |
1642 | 1667 | 8.507249 | CAAAGACTTATAAAAGTGAACAGAGGG | 58.493 | 37.037 | 0.00 | 0.00 | 46.09 | 4.30 |
1643 | 1668 | 7.554959 | AGACTTATAAAAGTGAACAGAGGGA | 57.445 | 36.000 | 0.00 | 0.00 | 46.09 | 4.20 |
1664 | 1689 | 4.635765 | GGAGTAGCTAATTGTGCATCAACA | 59.364 | 41.667 | 0.00 | 0.00 | 38.97 | 3.33 |
1696 | 1721 | 7.759489 | AAGCACTAGGTCATAAATCAAACAA | 57.241 | 32.000 | 0.00 | 0.00 | 0.00 | 2.83 |
1727 | 1752 | 2.025636 | ATAGGCTATGCTTACGGGGT | 57.974 | 50.000 | 6.15 | 0.00 | 0.00 | 4.95 |
1728 | 1753 | 1.045407 | TAGGCTATGCTTACGGGGTG | 58.955 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
1729 | 1754 | 0.981277 | AGGCTATGCTTACGGGGTGT | 60.981 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
1730 | 1755 | 0.814010 | GGCTATGCTTACGGGGTGTG | 60.814 | 60.000 | 0.00 | 0.00 | 0.00 | 3.82 |
1731 | 1756 | 0.177141 | GCTATGCTTACGGGGTGTGA | 59.823 | 55.000 | 0.00 | 0.00 | 0.00 | 3.58 |
1732 | 1757 | 1.202651 | GCTATGCTTACGGGGTGTGAT | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 3.06 |
1733 | 1758 | 2.483876 | CTATGCTTACGGGGTGTGATG | 58.516 | 52.381 | 0.00 | 0.00 | 0.00 | 3.07 |
1734 | 1759 | 0.908910 | ATGCTTACGGGGTGTGATGA | 59.091 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
1735 | 1760 | 0.908910 | TGCTTACGGGGTGTGATGAT | 59.091 | 50.000 | 0.00 | 0.00 | 0.00 | 2.45 |
1775 | 1800 | 0.798009 | CGCACGGGCATTTTTGCTAG | 60.798 | 55.000 | 11.77 | 0.00 | 41.24 | 3.42 |
1776 | 1801 | 0.243636 | GCACGGGCATTTTTGCTAGT | 59.756 | 50.000 | 3.77 | 0.00 | 40.72 | 2.57 |
1777 | 1802 | 1.336795 | GCACGGGCATTTTTGCTAGTT | 60.337 | 47.619 | 3.77 | 0.00 | 40.72 | 2.24 |
1778 | 1803 | 2.094957 | GCACGGGCATTTTTGCTAGTTA | 60.095 | 45.455 | 3.77 | 0.00 | 40.72 | 2.24 |
1779 | 1804 | 3.758300 | CACGGGCATTTTTGCTAGTTAG | 58.242 | 45.455 | 0.00 | 0.00 | 34.73 | 2.34 |
1780 | 1805 | 2.752903 | ACGGGCATTTTTGCTAGTTAGG | 59.247 | 45.455 | 0.00 | 0.00 | 34.73 | 2.69 |
1781 | 1806 | 2.479560 | CGGGCATTTTTGCTAGTTAGGC | 60.480 | 50.000 | 0.00 | 0.00 | 34.73 | 3.93 |
1782 | 1807 | 2.495669 | GGGCATTTTTGCTAGTTAGGCA | 59.504 | 45.455 | 0.00 | 0.00 | 37.97 | 4.75 |
1783 | 1808 | 3.056179 | GGGCATTTTTGCTAGTTAGGCAA | 60.056 | 43.478 | 0.00 | 0.00 | 46.12 | 4.52 |
1794 | 1819 | 8.446599 | TTGCTAGTTAGGCAAAAATATAGACC | 57.553 | 34.615 | 0.00 | 0.00 | 45.05 | 3.85 |
1795 | 1820 | 7.570132 | TGCTAGTTAGGCAAAAATATAGACCA | 58.430 | 34.615 | 0.00 | 0.00 | 36.71 | 4.02 |
1796 | 1821 | 7.715249 | TGCTAGTTAGGCAAAAATATAGACCAG | 59.285 | 37.037 | 0.00 | 0.00 | 36.71 | 4.00 |
1797 | 1822 | 7.931948 | GCTAGTTAGGCAAAAATATAGACCAGA | 59.068 | 37.037 | 0.00 | 0.00 | 0.00 | 3.86 |
1798 | 1823 | 9.832445 | CTAGTTAGGCAAAAATATAGACCAGAA | 57.168 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
1800 | 1825 | 9.700831 | AGTTAGGCAAAAATATAGACCAGAAAT | 57.299 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
1804 | 1829 | 9.034800 | AGGCAAAAATATAGACCAGAAATTTGA | 57.965 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
1805 | 1830 | 9.822185 | GGCAAAAATATAGACCAGAAATTTGAT | 57.178 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
1816 | 1841 | 9.807649 | AGACCAGAAATTTGATAAATATTGTGC | 57.192 | 29.630 | 0.00 | 0.00 | 0.00 | 4.57 |
1817 | 1842 | 8.947055 | ACCAGAAATTTGATAAATATTGTGCC | 57.053 | 30.769 | 0.00 | 0.00 | 0.00 | 5.01 |
1818 | 1843 | 8.538701 | ACCAGAAATTTGATAAATATTGTGCCA | 58.461 | 29.630 | 0.00 | 0.00 | 0.00 | 4.92 |
1819 | 1844 | 9.381033 | CCAGAAATTTGATAAATATTGTGCCAA | 57.619 | 29.630 | 0.00 | 0.00 | 0.00 | 4.52 |
1832 | 1857 | 9.553064 | AAATATTGTGCCAAATCTTTACAACAA | 57.447 | 25.926 | 0.00 | 0.00 | 34.50 | 2.83 |
1833 | 1858 | 6.843069 | ATTGTGCCAAATCTTTACAACAAC | 57.157 | 33.333 | 0.00 | 0.00 | 34.50 | 3.32 |
1834 | 1859 | 4.355437 | TGTGCCAAATCTTTACAACAACG | 58.645 | 39.130 | 0.00 | 0.00 | 0.00 | 4.10 |
1835 | 1860 | 4.142359 | TGTGCCAAATCTTTACAACAACGT | 60.142 | 37.500 | 0.00 | 0.00 | 0.00 | 3.99 |
1922 | 1947 | 9.396938 | GATATATGTCATCTTCTCGCATCTATG | 57.603 | 37.037 | 0.00 | 0.00 | 0.00 | 2.23 |
2166 | 2192 | 1.293062 | ATTGGGGTGCAGAGATCACT | 58.707 | 50.000 | 0.00 | 0.00 | 34.97 | 3.41 |
2217 | 2243 | 4.934001 | GGATGCACATACTCACATCTATGG | 59.066 | 45.833 | 0.00 | 0.00 | 39.10 | 2.74 |
2356 | 2382 | 2.440409 | CATGAGGAAAACCACAGAGGG | 58.560 | 52.381 | 0.00 | 0.00 | 43.89 | 4.30 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
46 | 47 | 6.669125 | TGACAATTTGAACCCTTGATTGAT | 57.331 | 33.333 | 2.79 | 0.00 | 33.24 | 2.57 |
72 | 73 | 6.169557 | TCTTTCCTACACTCACAGCTAAAA | 57.830 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
73 | 74 | 5.801531 | TCTTTCCTACACTCACAGCTAAA | 57.198 | 39.130 | 0.00 | 0.00 | 0.00 | 1.85 |
74 | 75 | 5.510861 | GGTTCTTTCCTACACTCACAGCTAA | 60.511 | 44.000 | 0.00 | 0.00 | 0.00 | 3.09 |
75 | 76 | 4.021368 | GGTTCTTTCCTACACTCACAGCTA | 60.021 | 45.833 | 0.00 | 0.00 | 0.00 | 3.32 |
76 | 77 | 3.244249 | GGTTCTTTCCTACACTCACAGCT | 60.244 | 47.826 | 0.00 | 0.00 | 0.00 | 4.24 |
77 | 78 | 3.067833 | GGTTCTTTCCTACACTCACAGC | 58.932 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
78 | 79 | 4.336889 | TGGTTCTTTCCTACACTCACAG | 57.663 | 45.455 | 0.00 | 0.00 | 0.00 | 3.66 |
79 | 80 | 4.974645 | ATGGTTCTTTCCTACACTCACA | 57.025 | 40.909 | 0.00 | 0.00 | 0.00 | 3.58 |
80 | 81 | 7.103641 | TGATTATGGTTCTTTCCTACACTCAC | 58.896 | 38.462 | 0.00 | 0.00 | 0.00 | 3.51 |
81 | 82 | 7.252612 | TGATTATGGTTCTTTCCTACACTCA | 57.747 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
82 | 83 | 8.451748 | GTTTGATTATGGTTCTTTCCTACACTC | 58.548 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
83 | 84 | 7.119262 | CGTTTGATTATGGTTCTTTCCTACACT | 59.881 | 37.037 | 0.00 | 0.00 | 0.00 | 3.55 |
84 | 85 | 7.118680 | TCGTTTGATTATGGTTCTTTCCTACAC | 59.881 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
85 | 86 | 7.162761 | TCGTTTGATTATGGTTCTTTCCTACA | 58.837 | 34.615 | 0.00 | 0.00 | 0.00 | 2.74 |
86 | 87 | 7.201617 | CCTCGTTTGATTATGGTTCTTTCCTAC | 60.202 | 40.741 | 0.00 | 0.00 | 0.00 | 3.18 |
87 | 88 | 6.821665 | CCTCGTTTGATTATGGTTCTTTCCTA | 59.178 | 38.462 | 0.00 | 0.00 | 0.00 | 2.94 |
88 | 89 | 5.648092 | CCTCGTTTGATTATGGTTCTTTCCT | 59.352 | 40.000 | 0.00 | 0.00 | 0.00 | 3.36 |
89 | 90 | 5.676331 | GCCTCGTTTGATTATGGTTCTTTCC | 60.676 | 44.000 | 0.00 | 0.00 | 0.00 | 3.13 |
90 | 91 | 5.123979 | AGCCTCGTTTGATTATGGTTCTTTC | 59.876 | 40.000 | 0.00 | 0.00 | 0.00 | 2.62 |
91 | 92 | 5.010282 | AGCCTCGTTTGATTATGGTTCTTT | 58.990 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
92 | 93 | 4.396166 | CAGCCTCGTTTGATTATGGTTCTT | 59.604 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
93 | 94 | 3.941483 | CAGCCTCGTTTGATTATGGTTCT | 59.059 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
94 | 95 | 3.938963 | TCAGCCTCGTTTGATTATGGTTC | 59.061 | 43.478 | 0.00 | 0.00 | 0.00 | 3.62 |
95 | 96 | 3.941483 | CTCAGCCTCGTTTGATTATGGTT | 59.059 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
96 | 97 | 3.055094 | ACTCAGCCTCGTTTGATTATGGT | 60.055 | 43.478 | 0.00 | 0.00 | 0.00 | 3.55 |
97 | 98 | 3.535561 | ACTCAGCCTCGTTTGATTATGG | 58.464 | 45.455 | 0.00 | 0.00 | 0.00 | 2.74 |
98 | 99 | 4.201851 | CCAACTCAGCCTCGTTTGATTATG | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 1.90 |
99 | 100 | 3.941483 | CCAACTCAGCCTCGTTTGATTAT | 59.059 | 43.478 | 0.00 | 0.00 | 0.00 | 1.28 |
100 | 101 | 3.007506 | TCCAACTCAGCCTCGTTTGATTA | 59.992 | 43.478 | 0.00 | 0.00 | 0.00 | 1.75 |
101 | 102 | 2.154462 | CCAACTCAGCCTCGTTTGATT | 58.846 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
102 | 103 | 1.347707 | TCCAACTCAGCCTCGTTTGAT | 59.652 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
103 | 104 | 0.756294 | TCCAACTCAGCCTCGTTTGA | 59.244 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
104 | 105 | 1.466167 | CATCCAACTCAGCCTCGTTTG | 59.534 | 52.381 | 0.00 | 0.00 | 0.00 | 2.93 |
105 | 106 | 1.072331 | ACATCCAACTCAGCCTCGTTT | 59.928 | 47.619 | 0.00 | 0.00 | 0.00 | 3.60 |
106 | 107 | 0.687354 | ACATCCAACTCAGCCTCGTT | 59.313 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
107 | 108 | 1.204941 | GTACATCCAACTCAGCCTCGT | 59.795 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
108 | 109 | 1.204704 | TGTACATCCAACTCAGCCTCG | 59.795 | 52.381 | 0.00 | 0.00 | 0.00 | 4.63 |
109 | 110 | 2.419297 | CCTGTACATCCAACTCAGCCTC | 60.419 | 54.545 | 0.00 | 0.00 | 0.00 | 4.70 |
110 | 111 | 1.556911 | CCTGTACATCCAACTCAGCCT | 59.443 | 52.381 | 0.00 | 0.00 | 0.00 | 4.58 |
111 | 112 | 1.407437 | CCCTGTACATCCAACTCAGCC | 60.407 | 57.143 | 0.00 | 0.00 | 0.00 | 4.85 |
112 | 113 | 1.555075 | TCCCTGTACATCCAACTCAGC | 59.445 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
113 | 114 | 3.981071 | TTCCCTGTACATCCAACTCAG | 57.019 | 47.619 | 0.00 | 0.00 | 0.00 | 3.35 |
114 | 115 | 4.715534 | TTTTCCCTGTACATCCAACTCA | 57.284 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
115 | 116 | 6.650120 | TCTATTTTCCCTGTACATCCAACTC | 58.350 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
116 | 117 | 6.215636 | ACTCTATTTTCCCTGTACATCCAACT | 59.784 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
117 | 118 | 6.316390 | CACTCTATTTTCCCTGTACATCCAAC | 59.684 | 42.308 | 0.00 | 0.00 | 0.00 | 3.77 |
118 | 119 | 6.414732 | CACTCTATTTTCCCTGTACATCCAA | 58.585 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
119 | 120 | 5.629133 | GCACTCTATTTTCCCTGTACATCCA | 60.629 | 44.000 | 0.00 | 0.00 | 0.00 | 3.41 |
120 | 121 | 4.816925 | GCACTCTATTTTCCCTGTACATCC | 59.183 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
121 | 122 | 5.675538 | AGCACTCTATTTTCCCTGTACATC | 58.324 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
122 | 123 | 5.189736 | TGAGCACTCTATTTTCCCTGTACAT | 59.810 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
123 | 124 | 4.530553 | TGAGCACTCTATTTTCCCTGTACA | 59.469 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
124 | 125 | 5.086104 | TGAGCACTCTATTTTCCCTGTAC | 57.914 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
125 | 126 | 5.189736 | ACATGAGCACTCTATTTTCCCTGTA | 59.810 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
126 | 127 | 4.018960 | ACATGAGCACTCTATTTTCCCTGT | 60.019 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
127 | 128 | 4.521146 | ACATGAGCACTCTATTTTCCCTG | 58.479 | 43.478 | 0.00 | 0.00 | 0.00 | 4.45 |
128 | 129 | 4.472833 | AGACATGAGCACTCTATTTTCCCT | 59.527 | 41.667 | 0.00 | 0.00 | 0.00 | 4.20 |
129 | 130 | 4.775236 | AGACATGAGCACTCTATTTTCCC | 58.225 | 43.478 | 0.00 | 0.00 | 0.00 | 3.97 |
130 | 131 | 6.183360 | GGAAAGACATGAGCACTCTATTTTCC | 60.183 | 42.308 | 0.00 | 7.71 | 34.87 | 3.13 |
131 | 132 | 6.183360 | GGGAAAGACATGAGCACTCTATTTTC | 60.183 | 42.308 | 0.00 | 3.23 | 0.00 | 2.29 |
132 | 133 | 5.649831 | GGGAAAGACATGAGCACTCTATTTT | 59.350 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
133 | 134 | 5.045286 | AGGGAAAGACATGAGCACTCTATTT | 60.045 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
134 | 135 | 4.472833 | AGGGAAAGACATGAGCACTCTATT | 59.527 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
135 | 136 | 4.036518 | AGGGAAAGACATGAGCACTCTAT | 58.963 | 43.478 | 0.00 | 0.00 | 0.00 | 1.98 |
136 | 137 | 3.445008 | AGGGAAAGACATGAGCACTCTA | 58.555 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
137 | 138 | 2.264455 | AGGGAAAGACATGAGCACTCT | 58.736 | 47.619 | 0.00 | 0.00 | 0.00 | 3.24 |
138 | 139 | 2.777832 | AGGGAAAGACATGAGCACTC | 57.222 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
139 | 140 | 4.851639 | ATTAGGGAAAGACATGAGCACT | 57.148 | 40.909 | 0.00 | 0.00 | 0.00 | 4.40 |
140 | 141 | 8.677148 | TTATTATTAGGGAAAGACATGAGCAC | 57.323 | 34.615 | 0.00 | 0.00 | 0.00 | 4.40 |
141 | 142 | 9.342308 | CTTTATTATTAGGGAAAGACATGAGCA | 57.658 | 33.333 | 0.00 | 0.00 | 31.83 | 4.26 |
142 | 143 | 8.293157 | GCTTTATTATTAGGGAAAGACATGAGC | 58.707 | 37.037 | 0.00 | 0.00 | 31.83 | 4.26 |
143 | 144 | 9.342308 | TGCTTTATTATTAGGGAAAGACATGAG | 57.658 | 33.333 | 0.00 | 0.00 | 31.83 | 2.90 |
144 | 145 | 9.120538 | GTGCTTTATTATTAGGGAAAGACATGA | 57.879 | 33.333 | 0.00 | 0.00 | 31.83 | 3.07 |
145 | 146 | 8.070171 | CGTGCTTTATTATTAGGGAAAGACATG | 58.930 | 37.037 | 0.00 | 0.00 | 31.83 | 3.21 |
146 | 147 | 7.990886 | TCGTGCTTTATTATTAGGGAAAGACAT | 59.009 | 33.333 | 0.00 | 0.00 | 31.83 | 3.06 |
147 | 148 | 7.332557 | TCGTGCTTTATTATTAGGGAAAGACA | 58.667 | 34.615 | 0.00 | 0.00 | 31.83 | 3.41 |
148 | 149 | 7.781548 | TCGTGCTTTATTATTAGGGAAAGAC | 57.218 | 36.000 | 0.00 | 0.00 | 31.83 | 3.01 |
149 | 150 | 8.974060 | ATTCGTGCTTTATTATTAGGGAAAGA | 57.026 | 30.769 | 0.00 | 0.00 | 31.83 | 2.52 |
150 | 151 | 9.450807 | CAATTCGTGCTTTATTATTAGGGAAAG | 57.549 | 33.333 | 0.00 | 0.00 | 33.05 | 2.62 |
151 | 152 | 9.179909 | TCAATTCGTGCTTTATTATTAGGGAAA | 57.820 | 29.630 | 0.00 | 0.00 | 0.00 | 3.13 |
152 | 153 | 8.740123 | TCAATTCGTGCTTTATTATTAGGGAA | 57.260 | 30.769 | 0.00 | 0.00 | 0.00 | 3.97 |
153 | 154 | 7.990886 | ACTCAATTCGTGCTTTATTATTAGGGA | 59.009 | 33.333 | 0.00 | 0.00 | 0.00 | 4.20 |
154 | 155 | 8.154649 | ACTCAATTCGTGCTTTATTATTAGGG | 57.845 | 34.615 | 0.00 | 0.00 | 0.00 | 3.53 |
155 | 156 | 9.046296 | AGACTCAATTCGTGCTTTATTATTAGG | 57.954 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
157 | 158 | 9.042008 | GGAGACTCAATTCGTGCTTTATTATTA | 57.958 | 33.333 | 4.53 | 0.00 | 0.00 | 0.98 |
158 | 159 | 7.254455 | CGGAGACTCAATTCGTGCTTTATTATT | 60.254 | 37.037 | 4.53 | 0.00 | 0.00 | 1.40 |
159 | 160 | 6.201044 | CGGAGACTCAATTCGTGCTTTATTAT | 59.799 | 38.462 | 4.53 | 0.00 | 0.00 | 1.28 |
160 | 161 | 5.518847 | CGGAGACTCAATTCGTGCTTTATTA | 59.481 | 40.000 | 4.53 | 0.00 | 0.00 | 0.98 |
161 | 162 | 4.330074 | CGGAGACTCAATTCGTGCTTTATT | 59.670 | 41.667 | 4.53 | 0.00 | 0.00 | 1.40 |
162 | 163 | 3.865745 | CGGAGACTCAATTCGTGCTTTAT | 59.134 | 43.478 | 4.53 | 0.00 | 0.00 | 1.40 |
163 | 164 | 3.250744 | CGGAGACTCAATTCGTGCTTTA | 58.749 | 45.455 | 4.53 | 0.00 | 0.00 | 1.85 |
164 | 165 | 2.069273 | CGGAGACTCAATTCGTGCTTT | 58.931 | 47.619 | 4.53 | 0.00 | 0.00 | 3.51 |
165 | 166 | 1.673033 | CCGGAGACTCAATTCGTGCTT | 60.673 | 52.381 | 0.00 | 0.00 | 0.00 | 3.91 |
166 | 167 | 0.108615 | CCGGAGACTCAATTCGTGCT | 60.109 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
167 | 168 | 1.084370 | CCCGGAGACTCAATTCGTGC | 61.084 | 60.000 | 0.73 | 0.00 | 0.00 | 5.34 |
168 | 169 | 0.246635 | ACCCGGAGACTCAATTCGTG | 59.753 | 55.000 | 0.73 | 0.00 | 0.00 | 4.35 |
169 | 170 | 0.974383 | AACCCGGAGACTCAATTCGT | 59.026 | 50.000 | 0.73 | 0.00 | 0.00 | 3.85 |
170 | 171 | 1.067142 | TGAACCCGGAGACTCAATTCG | 60.067 | 52.381 | 0.73 | 0.00 | 0.00 | 3.34 |
171 | 172 | 2.028020 | AGTGAACCCGGAGACTCAATTC | 60.028 | 50.000 | 0.73 | 3.03 | 0.00 | 2.17 |
172 | 173 | 1.978580 | AGTGAACCCGGAGACTCAATT | 59.021 | 47.619 | 0.73 | 0.00 | 0.00 | 2.32 |
173 | 174 | 1.276421 | CAGTGAACCCGGAGACTCAAT | 59.724 | 52.381 | 0.73 | 0.00 | 0.00 | 2.57 |
174 | 175 | 0.679505 | CAGTGAACCCGGAGACTCAA | 59.320 | 55.000 | 0.73 | 0.00 | 0.00 | 3.02 |
175 | 176 | 0.469331 | ACAGTGAACCCGGAGACTCA | 60.469 | 55.000 | 0.73 | 0.00 | 0.00 | 3.41 |
176 | 177 | 0.244178 | GACAGTGAACCCGGAGACTC | 59.756 | 60.000 | 0.73 | 0.00 | 0.00 | 3.36 |
177 | 178 | 1.524863 | CGACAGTGAACCCGGAGACT | 61.525 | 60.000 | 0.73 | 0.00 | 0.00 | 3.24 |
178 | 179 | 1.080705 | CGACAGTGAACCCGGAGAC | 60.081 | 63.158 | 0.73 | 0.00 | 0.00 | 3.36 |
179 | 180 | 2.927580 | GCGACAGTGAACCCGGAGA | 61.928 | 63.158 | 0.73 | 0.00 | 0.00 | 3.71 |
180 | 181 | 2.432628 | GCGACAGTGAACCCGGAG | 60.433 | 66.667 | 0.73 | 0.00 | 0.00 | 4.63 |
181 | 182 | 4.351938 | CGCGACAGTGAACCCGGA | 62.352 | 66.667 | 0.73 | 0.00 | 0.00 | 5.14 |
184 | 185 | 4.980805 | TGCCGCGACAGTGAACCC | 62.981 | 66.667 | 8.23 | 0.00 | 0.00 | 4.11 |
185 | 186 | 1.852067 | AAATGCCGCGACAGTGAACC | 61.852 | 55.000 | 8.23 | 0.00 | 0.00 | 3.62 |
186 | 187 | 0.040425 | AAAATGCCGCGACAGTGAAC | 60.040 | 50.000 | 8.23 | 0.00 | 0.00 | 3.18 |
187 | 188 | 0.665835 | AAAAATGCCGCGACAGTGAA | 59.334 | 45.000 | 8.23 | 0.00 | 0.00 | 3.18 |
188 | 189 | 1.195900 | GTAAAAATGCCGCGACAGTGA | 59.804 | 47.619 | 8.23 | 0.00 | 0.00 | 3.41 |
189 | 190 | 1.069568 | TGTAAAAATGCCGCGACAGTG | 60.070 | 47.619 | 8.23 | 0.00 | 0.00 | 3.66 |
190 | 191 | 1.069500 | GTGTAAAAATGCCGCGACAGT | 60.069 | 47.619 | 8.23 | 0.00 | 0.00 | 3.55 |
191 | 192 | 1.069568 | TGTGTAAAAATGCCGCGACAG | 60.070 | 47.619 | 8.23 | 0.00 | 0.00 | 3.51 |
192 | 193 | 0.945099 | TGTGTAAAAATGCCGCGACA | 59.055 | 45.000 | 8.23 | 0.48 | 0.00 | 4.35 |
193 | 194 | 2.039327 | TTGTGTAAAAATGCCGCGAC | 57.961 | 45.000 | 8.23 | 0.00 | 0.00 | 5.19 |
194 | 195 | 2.605823 | CCTTTGTGTAAAAATGCCGCGA | 60.606 | 45.455 | 8.23 | 0.00 | 0.00 | 5.87 |
195 | 196 | 1.718711 | CCTTTGTGTAAAAATGCCGCG | 59.281 | 47.619 | 0.00 | 0.00 | 0.00 | 6.46 |
196 | 197 | 2.729360 | GACCTTTGTGTAAAAATGCCGC | 59.271 | 45.455 | 0.00 | 0.00 | 0.00 | 6.53 |
197 | 198 | 3.243569 | TGGACCTTTGTGTAAAAATGCCG | 60.244 | 43.478 | 0.00 | 0.00 | 0.00 | 5.69 |
198 | 199 | 4.329462 | TGGACCTTTGTGTAAAAATGCC | 57.671 | 40.909 | 0.00 | 0.00 | 0.00 | 4.40 |
199 | 200 | 5.177327 | CACATGGACCTTTGTGTAAAAATGC | 59.823 | 40.000 | 15.90 | 0.00 | 38.69 | 3.56 |
200 | 201 | 5.177327 | GCACATGGACCTTTGTGTAAAAATG | 59.823 | 40.000 | 21.62 | 4.78 | 44.01 | 2.32 |
201 | 202 | 5.070313 | AGCACATGGACCTTTGTGTAAAAAT | 59.930 | 36.000 | 21.62 | 6.32 | 44.01 | 1.82 |
202 | 203 | 4.404073 | AGCACATGGACCTTTGTGTAAAAA | 59.596 | 37.500 | 21.62 | 0.00 | 44.01 | 1.94 |
203 | 204 | 3.957497 | AGCACATGGACCTTTGTGTAAAA | 59.043 | 39.130 | 21.62 | 0.00 | 44.01 | 1.52 |
204 | 205 | 3.561143 | AGCACATGGACCTTTGTGTAAA | 58.439 | 40.909 | 21.62 | 0.00 | 44.01 | 2.01 |
205 | 206 | 3.222173 | AGCACATGGACCTTTGTGTAA | 57.778 | 42.857 | 21.62 | 0.00 | 44.01 | 2.41 |
206 | 207 | 2.949177 | AGCACATGGACCTTTGTGTA | 57.051 | 45.000 | 21.62 | 0.00 | 44.01 | 2.90 |
207 | 208 | 2.071778 | AAGCACATGGACCTTTGTGT | 57.928 | 45.000 | 21.62 | 11.14 | 44.01 | 3.72 |
208 | 209 | 3.125316 | CAAAAGCACATGGACCTTTGTG | 58.875 | 45.455 | 18.47 | 18.47 | 44.75 | 3.33 |
209 | 210 | 2.102925 | CCAAAAGCACATGGACCTTTGT | 59.897 | 45.455 | 0.00 | 0.00 | 39.12 | 2.83 |
210 | 211 | 2.548493 | CCCAAAAGCACATGGACCTTTG | 60.548 | 50.000 | 0.00 | 1.25 | 39.12 | 2.77 |
211 | 212 | 1.693606 | CCCAAAAGCACATGGACCTTT | 59.306 | 47.619 | 0.00 | 0.00 | 39.12 | 3.11 |
212 | 213 | 1.341080 | CCCAAAAGCACATGGACCTT | 58.659 | 50.000 | 0.00 | 0.00 | 39.12 | 3.50 |
213 | 214 | 0.542702 | CCCCAAAAGCACATGGACCT | 60.543 | 55.000 | 0.00 | 0.00 | 39.12 | 3.85 |
214 | 215 | 0.541764 | TCCCCAAAAGCACATGGACC | 60.542 | 55.000 | 0.00 | 0.00 | 39.12 | 4.46 |
215 | 216 | 1.337118 | TTCCCCAAAAGCACATGGAC | 58.663 | 50.000 | 0.00 | 0.00 | 39.12 | 4.02 |
216 | 217 | 2.323999 | ATTCCCCAAAAGCACATGGA | 57.676 | 45.000 | 0.00 | 0.00 | 39.12 | 3.41 |
217 | 218 | 4.252878 | GTTAATTCCCCAAAAGCACATGG | 58.747 | 43.478 | 0.00 | 0.00 | 36.42 | 3.66 |
218 | 219 | 4.690280 | GTGTTAATTCCCCAAAAGCACATG | 59.310 | 41.667 | 0.00 | 0.00 | 0.00 | 3.21 |
219 | 220 | 4.560513 | CGTGTTAATTCCCCAAAAGCACAT | 60.561 | 41.667 | 0.00 | 0.00 | 0.00 | 3.21 |
220 | 221 | 3.243569 | CGTGTTAATTCCCCAAAAGCACA | 60.244 | 43.478 | 0.00 | 0.00 | 0.00 | 4.57 |
221 | 222 | 3.243602 | ACGTGTTAATTCCCCAAAAGCAC | 60.244 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
222 | 223 | 2.959707 | ACGTGTTAATTCCCCAAAAGCA | 59.040 | 40.909 | 0.00 | 0.00 | 0.00 | 3.91 |
223 | 224 | 3.571571 | GACGTGTTAATTCCCCAAAAGC | 58.428 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
224 | 225 | 3.251487 | ACGACGTGTTAATTCCCCAAAAG | 59.749 | 43.478 | 0.00 | 0.00 | 0.00 | 2.27 |
225 | 226 | 3.212685 | ACGACGTGTTAATTCCCCAAAA | 58.787 | 40.909 | 0.00 | 0.00 | 0.00 | 2.44 |
226 | 227 | 2.807392 | GACGACGTGTTAATTCCCCAAA | 59.193 | 45.455 | 4.58 | 0.00 | 0.00 | 3.28 |
227 | 228 | 2.415776 | GACGACGTGTTAATTCCCCAA | 58.584 | 47.619 | 4.58 | 0.00 | 0.00 | 4.12 |
228 | 229 | 1.338011 | GGACGACGTGTTAATTCCCCA | 60.338 | 52.381 | 4.58 | 0.00 | 0.00 | 4.96 |
229 | 230 | 1.362768 | GGACGACGTGTTAATTCCCC | 58.637 | 55.000 | 4.58 | 0.00 | 0.00 | 4.81 |
230 | 231 | 1.066645 | AGGGACGACGTGTTAATTCCC | 60.067 | 52.381 | 4.58 | 7.99 | 42.81 | 3.97 |
231 | 232 | 2.094338 | AGAGGGACGACGTGTTAATTCC | 60.094 | 50.000 | 4.58 | 0.00 | 0.00 | 3.01 |
232 | 233 | 3.227810 | AGAGGGACGACGTGTTAATTC | 57.772 | 47.619 | 4.58 | 0.00 | 0.00 | 2.17 |
233 | 234 | 3.672767 | AAGAGGGACGACGTGTTAATT | 57.327 | 42.857 | 4.58 | 0.00 | 0.00 | 1.40 |
234 | 235 | 3.672767 | AAAGAGGGACGACGTGTTAAT | 57.327 | 42.857 | 4.58 | 0.00 | 0.00 | 1.40 |
235 | 236 | 4.037923 | ACTTAAAGAGGGACGACGTGTTAA | 59.962 | 41.667 | 4.58 | 0.07 | 0.00 | 2.01 |
236 | 237 | 3.569701 | ACTTAAAGAGGGACGACGTGTTA | 59.430 | 43.478 | 4.58 | 0.00 | 0.00 | 2.41 |
237 | 238 | 2.363359 | ACTTAAAGAGGGACGACGTGTT | 59.637 | 45.455 | 4.58 | 0.00 | 0.00 | 3.32 |
238 | 239 | 1.959282 | ACTTAAAGAGGGACGACGTGT | 59.041 | 47.619 | 4.58 | 0.00 | 0.00 | 4.49 |
239 | 240 | 2.593257 | GACTTAAAGAGGGACGACGTG | 58.407 | 52.381 | 4.58 | 0.00 | 0.00 | 4.49 |
240 | 241 | 1.198637 | CGACTTAAAGAGGGACGACGT | 59.801 | 52.381 | 0.00 | 0.00 | 0.00 | 4.34 |
241 | 242 | 1.466167 | TCGACTTAAAGAGGGACGACG | 59.534 | 52.381 | 0.00 | 0.00 | 0.00 | 5.12 |
242 | 243 | 3.377798 | AGATCGACTTAAAGAGGGACGAC | 59.622 | 47.826 | 0.00 | 0.00 | 34.46 | 4.34 |
243 | 244 | 3.618351 | AGATCGACTTAAAGAGGGACGA | 58.382 | 45.455 | 0.00 | 0.00 | 35.42 | 4.20 |
244 | 245 | 5.296283 | TCTTAGATCGACTTAAAGAGGGACG | 59.704 | 44.000 | 0.00 | 0.00 | 0.00 | 4.79 |
245 | 246 | 6.696441 | TCTTAGATCGACTTAAAGAGGGAC | 57.304 | 41.667 | 0.00 | 0.00 | 0.00 | 4.46 |
246 | 247 | 7.713734 | TTTCTTAGATCGACTTAAAGAGGGA | 57.286 | 36.000 | 0.00 | 0.00 | 28.80 | 4.20 |
247 | 248 | 8.821894 | CATTTTCTTAGATCGACTTAAAGAGGG | 58.178 | 37.037 | 0.00 | 0.00 | 28.80 | 4.30 |
248 | 249 | 9.372369 | ACATTTTCTTAGATCGACTTAAAGAGG | 57.628 | 33.333 | 0.00 | 0.00 | 28.80 | 3.69 |
290 | 291 | 6.209788 | TGGATTCTTATAAACGCAGGGTTTTT | 59.790 | 34.615 | 19.72 | 14.58 | 46.52 | 1.94 |
291 | 292 | 5.712917 | TGGATTCTTATAAACGCAGGGTTTT | 59.287 | 36.000 | 19.72 | 10.77 | 46.52 | 2.43 |
293 | 294 | 4.850680 | TGGATTCTTATAAACGCAGGGTT | 58.149 | 39.130 | 0.00 | 0.00 | 41.76 | 4.11 |
294 | 295 | 4.497291 | TGGATTCTTATAAACGCAGGGT | 57.503 | 40.909 | 0.00 | 0.00 | 0.00 | 4.34 |
295 | 296 | 4.036380 | GGTTGGATTCTTATAAACGCAGGG | 59.964 | 45.833 | 0.00 | 0.00 | 0.00 | 4.45 |
296 | 297 | 4.036380 | GGGTTGGATTCTTATAAACGCAGG | 59.964 | 45.833 | 0.00 | 0.00 | 34.78 | 4.85 |
297 | 298 | 4.260620 | CGGGTTGGATTCTTATAAACGCAG | 60.261 | 45.833 | 0.00 | 0.00 | 34.43 | 5.18 |
298 | 299 | 3.623960 | CGGGTTGGATTCTTATAAACGCA | 59.376 | 43.478 | 0.00 | 0.00 | 34.43 | 5.24 |
299 | 300 | 3.547413 | GCGGGTTGGATTCTTATAAACGC | 60.547 | 47.826 | 0.00 | 0.00 | 35.32 | 4.84 |
300 | 301 | 3.302870 | CGCGGGTTGGATTCTTATAAACG | 60.303 | 47.826 | 0.00 | 0.00 | 0.00 | 3.60 |
301 | 302 | 3.872771 | TCGCGGGTTGGATTCTTATAAAC | 59.127 | 43.478 | 6.13 | 0.00 | 0.00 | 2.01 |
302 | 303 | 4.139859 | TCGCGGGTTGGATTCTTATAAA | 57.860 | 40.909 | 6.13 | 0.00 | 0.00 | 1.40 |
303 | 304 | 3.823281 | TCGCGGGTTGGATTCTTATAA | 57.177 | 42.857 | 6.13 | 0.00 | 0.00 | 0.98 |
304 | 305 | 4.312443 | GAATCGCGGGTTGGATTCTTATA | 58.688 | 43.478 | 6.13 | 0.00 | 43.20 | 0.98 |
305 | 306 | 2.930826 | ATCGCGGGTTGGATTCTTAT | 57.069 | 45.000 | 6.13 | 0.00 | 0.00 | 1.73 |
306 | 307 | 2.557317 | GAATCGCGGGTTGGATTCTTA | 58.443 | 47.619 | 6.13 | 0.00 | 43.20 | 2.10 |
307 | 308 | 1.379527 | GAATCGCGGGTTGGATTCTT | 58.620 | 50.000 | 6.13 | 0.00 | 43.20 | 2.52 |
308 | 309 | 0.463833 | GGAATCGCGGGTTGGATTCT | 60.464 | 55.000 | 6.13 | 0.00 | 44.94 | 2.40 |
309 | 310 | 0.463833 | AGGAATCGCGGGTTGGATTC | 60.464 | 55.000 | 6.13 | 6.85 | 44.88 | 2.52 |
310 | 311 | 0.034477 | AAGGAATCGCGGGTTGGATT | 60.034 | 50.000 | 6.13 | 0.00 | 35.67 | 3.01 |
311 | 312 | 0.034477 | AAAGGAATCGCGGGTTGGAT | 60.034 | 50.000 | 6.13 | 0.00 | 0.00 | 3.41 |
312 | 313 | 0.250989 | AAAAGGAATCGCGGGTTGGA | 60.251 | 50.000 | 6.13 | 0.00 | 0.00 | 3.53 |
313 | 314 | 1.400494 | CTAAAAGGAATCGCGGGTTGG | 59.600 | 52.381 | 6.13 | 0.00 | 0.00 | 3.77 |
314 | 315 | 1.202143 | GCTAAAAGGAATCGCGGGTTG | 60.202 | 52.381 | 6.13 | 0.00 | 0.00 | 3.77 |
315 | 316 | 1.092348 | GCTAAAAGGAATCGCGGGTT | 58.908 | 50.000 | 6.13 | 0.94 | 0.00 | 4.11 |
316 | 317 | 0.252197 | AGCTAAAAGGAATCGCGGGT | 59.748 | 50.000 | 6.13 | 0.00 | 0.00 | 5.28 |
317 | 318 | 2.234300 | TAGCTAAAAGGAATCGCGGG | 57.766 | 50.000 | 6.13 | 0.00 | 0.00 | 6.13 |
318 | 319 | 4.058817 | AGAATAGCTAAAAGGAATCGCGG | 58.941 | 43.478 | 6.13 | 0.00 | 0.00 | 6.46 |
319 | 320 | 4.508124 | ACAGAATAGCTAAAAGGAATCGCG | 59.492 | 41.667 | 0.00 | 0.00 | 0.00 | 5.87 |
320 | 321 | 5.523916 | TGACAGAATAGCTAAAAGGAATCGC | 59.476 | 40.000 | 0.00 | 0.00 | 0.00 | 4.58 |
321 | 322 | 7.254590 | CCTTGACAGAATAGCTAAAAGGAATCG | 60.255 | 40.741 | 0.00 | 0.00 | 34.15 | 3.34 |
322 | 323 | 7.554476 | ACCTTGACAGAATAGCTAAAAGGAATC | 59.446 | 37.037 | 15.68 | 4.04 | 35.10 | 2.52 |
323 | 324 | 7.337942 | CACCTTGACAGAATAGCTAAAAGGAAT | 59.662 | 37.037 | 15.68 | 0.00 | 35.10 | 3.01 |
324 | 325 | 6.655003 | CACCTTGACAGAATAGCTAAAAGGAA | 59.345 | 38.462 | 15.68 | 0.00 | 35.10 | 3.36 |
325 | 326 | 6.173339 | CACCTTGACAGAATAGCTAAAAGGA | 58.827 | 40.000 | 15.68 | 0.00 | 35.10 | 3.36 |
326 | 327 | 5.940470 | ACACCTTGACAGAATAGCTAAAAGG | 59.060 | 40.000 | 0.00 | 5.60 | 36.46 | 3.11 |
327 | 328 | 6.428159 | ACACACCTTGACAGAATAGCTAAAAG | 59.572 | 38.462 | 0.00 | 0.00 | 0.00 | 2.27 |
328 | 329 | 6.296026 | ACACACCTTGACAGAATAGCTAAAA | 58.704 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
329 | 330 | 5.865085 | ACACACCTTGACAGAATAGCTAAA | 58.135 | 37.500 | 0.00 | 0.00 | 0.00 | 1.85 |
330 | 331 | 5.483685 | ACACACCTTGACAGAATAGCTAA | 57.516 | 39.130 | 0.00 | 0.00 | 0.00 | 3.09 |
331 | 332 | 5.715279 | AGTACACACCTTGACAGAATAGCTA | 59.285 | 40.000 | 0.00 | 0.00 | 0.00 | 3.32 |
334 | 335 | 7.155328 | AGAAAGTACACACCTTGACAGAATAG | 58.845 | 38.462 | 0.00 | 0.00 | 0.00 | 1.73 |
386 | 387 | 1.467342 | ACTTTCGTTTAGCCAATCGCC | 59.533 | 47.619 | 0.00 | 0.00 | 38.78 | 5.54 |
400 | 401 | 8.494016 | AGATTATTCCAAAGGAAGTACTTTCG | 57.506 | 34.615 | 10.02 | 0.00 | 45.48 | 3.46 |
530 | 531 | 9.343539 | GGCTAGAATGAACCTCATTAAAATAGT | 57.656 | 33.333 | 1.96 | 0.00 | 46.20 | 2.12 |
582 | 584 | 8.492673 | TGTACTTTCATTTAGCCAACAGATAG | 57.507 | 34.615 | 0.00 | 0.00 | 0.00 | 2.08 |
672 | 674 | 9.729281 | AAAAGAAATACCACTAACGGAAGAATA | 57.271 | 29.630 | 0.00 | 0.00 | 0.00 | 1.75 |
726 | 728 | 8.894768 | AGTGGATCTTACTAAAATAGCATGAC | 57.105 | 34.615 | 0.00 | 0.00 | 0.00 | 3.06 |
783 | 786 | 9.297586 | CCGACGCTAAAATAAGCAGATAATATA | 57.702 | 33.333 | 0.00 | 0.00 | 42.91 | 0.86 |
809 | 812 | 4.122776 | ACCATGATACTGTGAGCGAAATC | 58.877 | 43.478 | 0.00 | 0.00 | 0.00 | 2.17 |
876 | 880 | 4.211164 | TCAAGCATGACAACTTTGTACTCG | 59.789 | 41.667 | 0.00 | 0.00 | 42.43 | 4.18 |
915 | 919 | 8.331022 | GTGATATATATATGTGCCAAAGAAGCG | 58.669 | 37.037 | 10.03 | 0.00 | 0.00 | 4.68 |
938 | 942 | 9.586435 | CTGTGAAAATCATATACTGTACTGTGA | 57.414 | 33.333 | 15.01 | 4.69 | 0.00 | 3.58 |
992 | 996 | 3.650281 | TGTTGATATCCATGGCTGTGT | 57.350 | 42.857 | 6.96 | 0.00 | 0.00 | 3.72 |
1143 | 1154 | 5.904362 | ATTCAAACTTCTGACTAATGGCC | 57.096 | 39.130 | 0.00 | 0.00 | 0.00 | 5.36 |
1325 | 1337 | 2.239400 | CGACCACTCCTGGCAGATATA | 58.761 | 52.381 | 17.94 | 0.00 | 42.08 | 0.86 |
1336 | 1348 | 1.103803 | TAGTGATCAGCGACCACTCC | 58.896 | 55.000 | 8.56 | 0.00 | 41.01 | 3.85 |
1410 | 1432 | 9.121658 | GCCATATACTTCTAAAAGGCTAAAACT | 57.878 | 33.333 | 0.00 | 0.00 | 37.89 | 2.66 |
1495 | 1520 | 4.584325 | TCAGTTGCTATTGCCAACTTTTCT | 59.416 | 37.500 | 11.82 | 0.00 | 37.95 | 2.52 |
1531 | 1556 | 5.992217 | AGTGAACAGAGGAAGTACATCAAAC | 59.008 | 40.000 | 0.00 | 0.00 | 0.00 | 2.93 |
1543 | 1568 | 8.974060 | AACAACTTATAAAAGTGAACAGAGGA | 57.026 | 30.769 | 0.00 | 0.00 | 45.37 | 3.71 |
1548 | 1573 | 9.997482 | GTCTGAAACAACTTATAAAAGTGAACA | 57.003 | 29.630 | 0.00 | 0.00 | 45.37 | 3.18 |
1565 | 1590 | 8.034215 | ACAACTCAATTTCATTTGTCTGAAACA | 58.966 | 29.630 | 1.68 | 0.00 | 45.21 | 2.83 |
1569 | 1594 | 8.871862 | CAAAACAACTCAATTTCATTTGTCTGA | 58.128 | 29.630 | 0.00 | 0.00 | 30.14 | 3.27 |
1584 | 1609 | 3.081061 | AGACAGTGTGCAAAACAACTCA | 58.919 | 40.909 | 0.00 | 0.00 | 41.57 | 3.41 |
1597 | 1622 | 6.480320 | GTCTTTGTAGATGTTTCAGACAGTGT | 59.520 | 38.462 | 0.00 | 0.00 | 42.62 | 3.55 |
1638 | 1663 | 3.543680 | TGCACAATTAGCTACTCCCTC | 57.456 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
1642 | 1667 | 5.220739 | CCTGTTGATGCACAATTAGCTACTC | 60.221 | 44.000 | 0.00 | 0.43 | 40.76 | 2.59 |
1643 | 1668 | 4.637534 | CCTGTTGATGCACAATTAGCTACT | 59.362 | 41.667 | 0.00 | 0.00 | 40.76 | 2.57 |
1756 | 1781 | 0.798009 | CTAGCAAAAATGCCCGTGCG | 60.798 | 55.000 | 0.00 | 0.00 | 41.90 | 5.34 |
1761 | 1786 | 2.495669 | TGCCTAACTAGCAAAAATGCCC | 59.504 | 45.455 | 0.00 | 0.00 | 37.28 | 5.36 |
1762 | 1787 | 3.866883 | TGCCTAACTAGCAAAAATGCC | 57.133 | 42.857 | 0.00 | 0.00 | 37.28 | 4.40 |
1778 | 1803 | 9.034800 | TCAAATTTCTGGTCTATATTTTTGCCT | 57.965 | 29.630 | 0.00 | 0.00 | 0.00 | 4.75 |
1779 | 1804 | 9.822185 | ATCAAATTTCTGGTCTATATTTTTGCC | 57.178 | 29.630 | 0.00 | 0.00 | 0.00 | 4.52 |
1790 | 1815 | 9.807649 | GCACAATATTTATCAAATTTCTGGTCT | 57.192 | 29.630 | 0.00 | 0.00 | 32.38 | 3.85 |
1791 | 1816 | 9.034544 | GGCACAATATTTATCAAATTTCTGGTC | 57.965 | 33.333 | 0.00 | 0.00 | 32.38 | 4.02 |
1792 | 1817 | 8.538701 | TGGCACAATATTTATCAAATTTCTGGT | 58.461 | 29.630 | 0.00 | 0.00 | 31.92 | 4.00 |
1793 | 1818 | 8.945481 | TGGCACAATATTTATCAAATTTCTGG | 57.055 | 30.769 | 0.00 | 0.00 | 31.92 | 3.86 |
1812 | 1837 | 4.142359 | ACGTTGTTGTAAAGATTTGGCACA | 60.142 | 37.500 | 0.00 | 0.00 | 0.00 | 4.57 |
1813 | 1838 | 4.206200 | CACGTTGTTGTAAAGATTTGGCAC | 59.794 | 41.667 | 0.00 | 0.00 | 0.00 | 5.01 |
1814 | 1839 | 4.096532 | TCACGTTGTTGTAAAGATTTGGCA | 59.903 | 37.500 | 0.00 | 0.00 | 0.00 | 4.92 |
1815 | 1840 | 4.602995 | TCACGTTGTTGTAAAGATTTGGC | 58.397 | 39.130 | 0.00 | 0.00 | 0.00 | 4.52 |
1816 | 1841 | 6.262601 | AGTTCACGTTGTTGTAAAGATTTGG | 58.737 | 36.000 | 0.00 | 0.00 | 0.00 | 3.28 |
1817 | 1842 | 7.906010 | TGTAGTTCACGTTGTTGTAAAGATTTG | 59.094 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
1818 | 1843 | 7.976826 | TGTAGTTCACGTTGTTGTAAAGATTT | 58.023 | 30.769 | 0.00 | 0.00 | 0.00 | 2.17 |
1819 | 1844 | 7.542534 | TGTAGTTCACGTTGTTGTAAAGATT | 57.457 | 32.000 | 0.00 | 0.00 | 0.00 | 2.40 |
1820 | 1845 | 7.493320 | TCTTGTAGTTCACGTTGTTGTAAAGAT | 59.507 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
1821 | 1846 | 6.812656 | TCTTGTAGTTCACGTTGTTGTAAAGA | 59.187 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
1822 | 1847 | 6.996106 | TCTTGTAGTTCACGTTGTTGTAAAG | 58.004 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
1823 | 1848 | 6.964741 | TCTTGTAGTTCACGTTGTTGTAAA | 57.035 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
1824 | 1849 | 7.383029 | CCTATCTTGTAGTTCACGTTGTTGTAA | 59.617 | 37.037 | 0.00 | 0.00 | 0.00 | 2.41 |
1825 | 1850 | 6.864685 | CCTATCTTGTAGTTCACGTTGTTGTA | 59.135 | 38.462 | 0.00 | 0.00 | 0.00 | 2.41 |
1826 | 1851 | 5.694910 | CCTATCTTGTAGTTCACGTTGTTGT | 59.305 | 40.000 | 0.00 | 0.00 | 0.00 | 3.32 |
1827 | 1852 | 5.924254 | TCCTATCTTGTAGTTCACGTTGTTG | 59.076 | 40.000 | 0.00 | 0.00 | 0.00 | 3.33 |
1828 | 1853 | 6.092955 | TCCTATCTTGTAGTTCACGTTGTT | 57.907 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
1829 | 1854 | 5.717078 | TCCTATCTTGTAGTTCACGTTGT | 57.283 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
1830 | 1855 | 7.170998 | AGTTTTCCTATCTTGTAGTTCACGTTG | 59.829 | 37.037 | 0.00 | 0.00 | 0.00 | 4.10 |
1831 | 1856 | 7.215085 | AGTTTTCCTATCTTGTAGTTCACGTT | 58.785 | 34.615 | 0.00 | 0.00 | 0.00 | 3.99 |
1832 | 1857 | 6.756221 | AGTTTTCCTATCTTGTAGTTCACGT | 58.244 | 36.000 | 0.00 | 0.00 | 0.00 | 4.49 |
1833 | 1858 | 7.062371 | CAGAGTTTTCCTATCTTGTAGTTCACG | 59.938 | 40.741 | 0.00 | 0.00 | 0.00 | 4.35 |
1834 | 1859 | 7.332182 | CCAGAGTTTTCCTATCTTGTAGTTCAC | 59.668 | 40.741 | 0.00 | 0.00 | 0.00 | 3.18 |
1835 | 1860 | 7.386851 | CCAGAGTTTTCCTATCTTGTAGTTCA | 58.613 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
1922 | 1947 | 2.933260 | TCTTGCAAAAAGAAAAACGGGC | 59.067 | 40.909 | 0.00 | 0.00 | 0.00 | 6.13 |
1927 | 1952 | 3.938334 | GCCCAGTCTTGCAAAAAGAAAAA | 59.062 | 39.130 | 0.00 | 0.00 | 0.00 | 1.94 |
1932 | 1957 | 2.867975 | CAAAGCCCAGTCTTGCAAAAAG | 59.132 | 45.455 | 0.00 | 0.00 | 0.00 | 2.27 |
2166 | 2192 | 3.548770 | ACATATCGGTTCACTCTCCGTA | 58.451 | 45.455 | 3.64 | 0.00 | 45.88 | 4.02 |
2217 | 2243 | 8.161699 | TGAGTTCCACTTAAAGAAATGGTAAC | 57.838 | 34.615 | 0.00 | 0.00 | 33.67 | 2.50 |
2356 | 2382 | 2.026542 | AGATCCGGTCTTTTTACCCACC | 60.027 | 50.000 | 0.00 | 0.00 | 36.03 | 4.61 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.