Multiple sequence alignment - TraesCS5A01G091000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G091000 chr5A 100.000 7122 0 0 1 7122 125149870 125142749 0.000000e+00 13152.0
1 TraesCS5A01G091000 chr5A 98.148 378 6 1 6745 7122 129538934 129538558 0.000000e+00 658.0
2 TraesCS5A01G091000 chr5A 94.286 35 0 1 323 357 562117868 562117836 1.300000e-02 52.8
3 TraesCS5A01G091000 chr5D 94.003 3852 143 44 769 4568 116741581 116745396 0.000000e+00 5753.0
4 TraesCS5A01G091000 chr5D 95.187 1787 67 8 4565 6334 116745505 116747289 0.000000e+00 2806.0
5 TraesCS5A01G091000 chr5D 85.073 757 65 22 1 752 116740882 116741595 0.000000e+00 728.0
6 TraesCS5A01G091000 chr5D 96.350 274 8 1 6358 6629 116747398 116747671 3.920000e-122 449.0
7 TraesCS5A01G091000 chr5D 91.406 128 4 3 6620 6747 116747697 116747817 1.230000e-37 169.0
8 TraesCS5A01G091000 chr5B 90.645 3891 195 53 2814 6629 128467119 128470915 0.000000e+00 5012.0
9 TraesCS5A01G091000 chr5B 91.149 1062 67 20 1768 2817 128465994 128467040 0.000000e+00 1415.0
10 TraesCS5A01G091000 chr5B 91.379 812 33 12 769 1563 128464438 128465229 0.000000e+00 1077.0
11 TraesCS5A01G091000 chr5B 85.430 755 73 17 6 752 128463726 128464451 0.000000e+00 750.0
12 TraesCS5A01G091000 chr5B 94.975 199 5 2 1573 1770 128465721 128465915 2.500000e-79 307.0
13 TraesCS5A01G091000 chr5B 93.220 118 4 4 6620 6735 128470941 128471056 3.420000e-38 171.0
14 TraesCS5A01G091000 chr2B 98.939 377 4 0 6746 7122 256958946 256958570 0.000000e+00 675.0
15 TraesCS5A01G091000 chr6B 98.939 377 3 1 6746 7122 184905470 184905845 0.000000e+00 673.0
16 TraesCS5A01G091000 chr1A 98.677 378 5 0 6745 7122 11154162 11153785 0.000000e+00 671.0
17 TraesCS5A01G091000 chrUn 98.413 378 6 0 6745 7122 259785137 259785514 0.000000e+00 665.0
18 TraesCS5A01G091000 chr7A 98.413 378 5 1 6745 7122 704315761 704316137 0.000000e+00 664.0
19 TraesCS5A01G091000 chr4B 98.413 378 5 1 6745 7122 445051048 445050672 0.000000e+00 664.0
20 TraesCS5A01G091000 chr4B 98.148 378 5 2 6745 7122 75183551 75183926 0.000000e+00 658.0
21 TraesCS5A01G091000 chr2A 98.148 378 6 1 6745 7122 139865876 139865500 0.000000e+00 658.0
22 TraesCS5A01G091000 chr7B 84.112 107 17 0 5273 5379 642548316 642548210 3.510000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G091000 chr5A 125142749 125149870 7121 True 13152.000000 13152 100.0000 1 7122 1 chr5A.!!$R1 7121
1 TraesCS5A01G091000 chr5D 116740882 116747817 6935 False 1981.000000 5753 92.4038 1 6747 5 chr5D.!!$F1 6746
2 TraesCS5A01G091000 chr5B 128463726 128471056 7330 False 1455.333333 5012 91.1330 6 6735 6 chr5B.!!$F1 6729

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
521 543 0.177141 GCTGCACCGGTTCTACCATA 59.823 55.000 2.97 0.00 38.47 2.74 F
654 676 0.322546 GCTTGGGGTCTAACCTGTGG 60.323 60.000 0.00 0.00 38.64 4.17 F
1503 1550 0.332972 GAGGGGATTGGTTGCTTCCT 59.667 55.000 0.00 0.00 0.00 3.36 F
1803 2415 0.950836 CACACGTGCCTGGATGAAAA 59.049 50.000 17.22 0.00 0.00 2.29 F
2207 2822 2.108168 CATCTAGGGAAGGAACGGACA 58.892 52.381 0.00 0.00 0.00 4.02 F
3821 4534 1.066430 GGTAGGGAATTGTGAGCGTGA 60.066 52.381 0.00 0.00 0.00 4.35 F
4527 5302 0.327924 TGGACCAGGTATGCCTTGTG 59.672 55.000 11.46 0.45 44.18 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2219 2834 0.107410 TGAACCAACTGGCTCACGTT 60.107 50.000 0.00 0.00 35.54 3.99 R
2628 3248 8.089115 AGATCGCTGGAGCTTAAATTAATTAC 57.911 34.615 0.01 0.00 34.68 1.89 R
3201 3904 1.677576 CAGGCTTCAGAAACTGCACAA 59.322 47.619 2.48 0.00 0.00 3.33 R
3735 4444 0.110486 AAGGTGTGTCATGGTCCACC 59.890 55.000 16.22 16.22 46.17 4.61 R
4132 4860 1.676006 GGGTCCACAAAATAGATGCGG 59.324 52.381 0.00 0.00 0.00 5.69 R
5002 5897 1.000060 GTCATGCAAGCAGCTGGAAAA 60.000 47.619 17.12 0.00 45.94 2.29 R
6240 7146 0.737219 GCTGATCCTGTTGATGGCAC 59.263 55.000 0.00 0.00 32.41 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 8.380099 TGTTCATAACACCCATAGAAAACTACT 58.620 33.333 0.00 0.00 36.25 2.57
49 50 3.458189 CCATAGAAAACTACTGGAGGCG 58.542 50.000 0.00 0.00 0.00 5.52
85 86 3.541996 AAAGTTTCCAGGCTTTGTTGG 57.458 42.857 0.00 0.00 34.11 3.77
86 87 2.452600 AGTTTCCAGGCTTTGTTGGA 57.547 45.000 0.00 0.00 41.59 3.53
87 88 2.962859 AGTTTCCAGGCTTTGTTGGAT 58.037 42.857 0.00 0.00 42.73 3.41
88 89 3.308401 AGTTTCCAGGCTTTGTTGGATT 58.692 40.909 0.00 0.00 42.73 3.01
89 90 3.711190 AGTTTCCAGGCTTTGTTGGATTT 59.289 39.130 0.00 0.00 42.73 2.17
90 91 4.164030 AGTTTCCAGGCTTTGTTGGATTTT 59.836 37.500 0.00 0.00 42.73 1.82
105 106 7.451732 TGTTGGATTTTGTTGGATGATTTGAT 58.548 30.769 0.00 0.00 0.00 2.57
123 124 4.937201 TGATGATATCGCAGTACCAAGT 57.063 40.909 0.00 0.00 0.00 3.16
125 126 5.049828 TGATGATATCGCAGTACCAAGTTG 58.950 41.667 0.00 0.00 0.00 3.16
126 127 4.729227 TGATATCGCAGTACCAAGTTGA 57.271 40.909 3.87 0.00 0.00 3.18
128 129 4.868171 TGATATCGCAGTACCAAGTTGAAC 59.132 41.667 3.87 2.32 0.00 3.18
129 130 2.605837 TCGCAGTACCAAGTTGAACA 57.394 45.000 3.87 0.00 0.00 3.18
136 138 5.687285 GCAGTACCAAGTTGAACATTTTCAG 59.313 40.000 3.87 0.00 42.79 3.02
149 151 4.710324 ACATTTTCAGTTTGTAGGACGGA 58.290 39.130 0.00 0.00 0.00 4.69
155 157 4.628074 TCAGTTTGTAGGACGGAAAAGAG 58.372 43.478 0.00 0.00 0.00 2.85
160 162 3.236896 TGTAGGACGGAAAAGAGACCTT 58.763 45.455 0.00 0.00 0.00 3.50
164 166 4.094476 AGGACGGAAAAGAGACCTTATCA 58.906 43.478 0.00 0.00 31.15 2.15
186 188 4.893424 TTTGGTGCACACTAAGAAACTC 57.107 40.909 20.43 0.00 33.37 3.01
189 191 2.731976 GGTGCACACTAAGAAACTCTCG 59.268 50.000 20.43 0.00 0.00 4.04
210 212 6.829229 TCGACAAGAGAACCAAGTCTATTA 57.171 37.500 0.00 0.00 28.18 0.98
228 231 1.692148 TAAGGAAGAATGCGCACGCG 61.692 55.000 14.90 3.53 45.51 6.01
239 242 4.688419 GCACGCGCATGCACACTT 62.688 61.111 25.28 0.00 45.39 3.16
242 245 2.051076 CGCGCATGCACACTTGTT 60.051 55.556 19.57 0.00 42.97 2.83
252 255 5.734220 GCATGCACACTTGTTTATCCCTATG 60.734 44.000 14.21 0.00 0.00 2.23
272 275 7.396055 CCCTATGAACACCCTCAAAAGATTAAA 59.604 37.037 0.00 0.00 0.00 1.52
273 276 8.971073 CCTATGAACACCCTCAAAAGATTAAAT 58.029 33.333 0.00 0.00 0.00 1.40
303 306 8.757982 ACTACCTCTGTACCGAAATATAAGAA 57.242 34.615 0.00 0.00 0.00 2.52
315 319 9.705290 ACCGAAATATAAGAAGTTTTGCAATTT 57.295 25.926 0.00 0.00 0.00 1.82
402 406 2.802816 CGCTAGATGCACCTTGTAATCC 59.197 50.000 0.00 0.00 43.06 3.01
403 407 3.741075 CGCTAGATGCACCTTGTAATCCA 60.741 47.826 0.00 0.00 43.06 3.41
404 408 3.561725 GCTAGATGCACCTTGTAATCCAC 59.438 47.826 0.00 0.00 42.31 4.02
405 409 3.719268 AGATGCACCTTGTAATCCACA 57.281 42.857 0.00 0.00 34.51 4.17
406 410 4.240881 AGATGCACCTTGTAATCCACAT 57.759 40.909 0.00 0.00 36.90 3.21
407 411 3.949754 AGATGCACCTTGTAATCCACATG 59.050 43.478 0.00 0.00 36.90 3.21
408 412 1.818060 TGCACCTTGTAATCCACATGC 59.182 47.619 0.00 0.00 39.88 4.06
409 413 1.818060 GCACCTTGTAATCCACATGCA 59.182 47.619 0.00 0.00 39.45 3.96
410 414 2.428171 GCACCTTGTAATCCACATGCAT 59.572 45.455 0.00 0.00 39.45 3.96
411 415 3.735820 GCACCTTGTAATCCACATGCATG 60.736 47.826 25.09 25.09 39.45 4.06
412 416 3.444742 CACCTTGTAATCCACATGCATGT 59.555 43.478 26.61 26.61 42.84 3.21
413 417 3.696051 ACCTTGTAATCCACATGCATGTC 59.304 43.478 29.23 17.04 39.39 3.06
414 418 3.695556 CCTTGTAATCCACATGCATGTCA 59.304 43.478 29.23 19.41 39.39 3.58
415 419 4.340097 CCTTGTAATCCACATGCATGTCAT 59.660 41.667 29.23 20.12 39.39 3.06
416 420 5.532032 CCTTGTAATCCACATGCATGTCATA 59.468 40.000 29.23 17.21 39.39 2.15
417 421 6.375945 TTGTAATCCACATGCATGTCATAC 57.624 37.500 29.23 24.62 39.39 2.39
454 476 1.963515 GCGGATGGCCTGGAATAAATT 59.036 47.619 3.32 0.00 34.80 1.82
462 484 5.244755 TGGCCTGGAATAAATTCAAAAAGC 58.755 37.500 3.32 0.93 38.53 3.51
478 500 1.671979 AAGCATGCGAGCACACATAT 58.328 45.000 13.01 0.00 36.85 1.78
479 501 2.531522 AGCATGCGAGCACACATATA 57.468 45.000 13.01 0.00 36.85 0.86
490 512 6.128445 GCGAGCACACATATAGCAAATCTAAT 60.128 38.462 0.00 0.00 0.00 1.73
503 525 6.729187 AGCAAATCTAATACTTGAATTCGGC 58.271 36.000 0.04 0.00 0.00 5.54
521 543 0.177141 GCTGCACCGGTTCTACCATA 59.823 55.000 2.97 0.00 38.47 2.74
562 584 4.202060 TGCTTAGTTCGCTTCTCTATCCAG 60.202 45.833 0.00 0.00 0.00 3.86
563 585 4.202070 GCTTAGTTCGCTTCTCTATCCAGT 60.202 45.833 0.00 0.00 0.00 4.00
564 586 5.502153 TTAGTTCGCTTCTCTATCCAGTC 57.498 43.478 0.00 0.00 0.00 3.51
565 587 2.691011 AGTTCGCTTCTCTATCCAGTCC 59.309 50.000 0.00 0.00 0.00 3.85
566 588 2.427453 GTTCGCTTCTCTATCCAGTCCA 59.573 50.000 0.00 0.00 0.00 4.02
629 651 1.745087 GATGCGAGGCTTGGATTCAAA 59.255 47.619 10.35 0.00 31.77 2.69
654 676 0.322546 GCTTGGGGTCTAACCTGTGG 60.323 60.000 0.00 0.00 38.64 4.17
681 703 5.406780 CAGTGTCCTAGACTTCATCAACAAC 59.593 44.000 0.00 0.00 33.15 3.32
686 714 7.668469 TGTCCTAGACTTCATCAACAACTAGTA 59.332 37.037 0.00 0.00 33.15 1.82
687 715 8.185505 GTCCTAGACTTCATCAACAACTAGTAG 58.814 40.741 0.00 0.00 0.00 2.57
688 716 7.889073 TCCTAGACTTCATCAACAACTAGTAGT 59.111 37.037 0.00 0.00 0.00 2.73
737 765 1.714899 GCAGTCGTTGGTGTGCTTGT 61.715 55.000 0.00 0.00 32.97 3.16
748 776 3.838317 TGGTGTGCTTGTAGGAGAAGTAT 59.162 43.478 0.00 0.00 0.00 2.12
749 777 4.286032 TGGTGTGCTTGTAGGAGAAGTATT 59.714 41.667 0.00 0.00 0.00 1.89
750 778 5.482526 TGGTGTGCTTGTAGGAGAAGTATTA 59.517 40.000 0.00 0.00 0.00 0.98
751 779 6.156256 TGGTGTGCTTGTAGGAGAAGTATTAT 59.844 38.462 0.00 0.00 0.00 1.28
752 780 7.048512 GGTGTGCTTGTAGGAGAAGTATTATT 58.951 38.462 0.00 0.00 0.00 1.40
753 781 7.553044 GGTGTGCTTGTAGGAGAAGTATTATTT 59.447 37.037 0.00 0.00 0.00 1.40
754 782 8.947115 GTGTGCTTGTAGGAGAAGTATTATTTT 58.053 33.333 0.00 0.00 0.00 1.82
755 783 9.515226 TGTGCTTGTAGGAGAAGTATTATTTTT 57.485 29.630 0.00 0.00 0.00 1.94
809 837 4.691216 AGGAGTAAAACAATTGTCTCTCGC 59.309 41.667 12.39 10.48 0.00 5.03
851 879 3.373565 CCAGGGGCAAAAGCGACC 61.374 66.667 0.00 0.00 0.00 4.79
1375 1403 4.082523 GGCAGCAGGTACTCCGCA 62.083 66.667 0.00 0.00 34.60 5.69
1395 1423 1.632948 CGTGCTGATCACCAGTGCTG 61.633 60.000 5.60 0.00 44.71 4.41
1400 1428 1.218047 GATCACCAGTGCTGCCGTA 59.782 57.895 0.00 0.00 0.00 4.02
1404 1451 2.125512 CCAGTGCTGCCGTAGACC 60.126 66.667 0.00 0.00 0.00 3.85
1460 1507 8.964420 TTTCTCTTCTTTATTTATTTGGTGCG 57.036 30.769 0.00 0.00 0.00 5.34
1461 1508 7.083875 TCTCTTCTTTATTTATTTGGTGCGG 57.916 36.000 0.00 0.00 0.00 5.69
1462 1509 6.657541 TCTCTTCTTTATTTATTTGGTGCGGT 59.342 34.615 0.00 0.00 0.00 5.68
1463 1510 6.616947 TCTTCTTTATTTATTTGGTGCGGTG 58.383 36.000 0.00 0.00 0.00 4.94
1503 1550 0.332972 GAGGGGATTGGTTGCTTCCT 59.667 55.000 0.00 0.00 0.00 3.36
1518 1565 2.555227 GCTTCCTTGGGATTCTTGGTGA 60.555 50.000 0.00 0.00 0.00 4.02
1800 2412 1.188871 TACCACACGTGCCTGGATGA 61.189 55.000 26.83 11.94 0.00 2.92
1803 2415 0.950836 CACACGTGCCTGGATGAAAA 59.049 50.000 17.22 0.00 0.00 2.29
1848 2460 4.205996 TCGCAAATGTTTCGTGATGTTTTG 59.794 37.500 0.00 0.00 0.00 2.44
2000 2614 4.761227 TGTCATGCTTGTCTTGCTCAATAA 59.239 37.500 0.00 0.00 0.00 1.40
2037 2652 2.787473 TAGTTGGTTGATGCTGGGAG 57.213 50.000 0.00 0.00 0.00 4.30
2207 2822 2.108168 CATCTAGGGAAGGAACGGACA 58.892 52.381 0.00 0.00 0.00 4.02
2310 2928 4.092821 GGTTGCAAAAAGTCAAAGTGTTCC 59.907 41.667 0.00 0.00 0.00 3.62
2360 2978 7.770366 TTGTTTCTCCCCTATTTTAGGTTTC 57.230 36.000 0.19 0.00 44.73 2.78
2361 2979 6.250711 TGTTTCTCCCCTATTTTAGGTTTCC 58.749 40.000 0.19 0.00 44.73 3.13
2362 2980 5.461516 TTCTCCCCTATTTTAGGTTTCCC 57.538 43.478 0.19 0.00 44.73 3.97
2363 2981 3.789840 TCTCCCCTATTTTAGGTTTCCCC 59.210 47.826 0.19 0.00 44.73 4.81
2441 3060 5.036117 TCTCCATATTTGGTAGTGCTTCC 57.964 43.478 1.86 0.00 44.06 3.46
2479 3099 4.537015 GTTCACTTAAAGCGTGCAATTCT 58.463 39.130 0.00 0.00 32.54 2.40
2480 3100 4.829064 TCACTTAAAGCGTGCAATTCTT 57.171 36.364 0.00 0.00 32.54 2.52
2628 3248 5.067153 AGAGCACTAACACTGATAGCTACTG 59.933 44.000 0.00 0.00 0.00 2.74
2665 3285 4.323417 TCCAGCGATCTAAAGAAAAGCAA 58.677 39.130 0.00 0.00 0.00 3.91
3139 3842 8.092687 ACTGTACTTAACTTGTTGAACCGATAT 58.907 33.333 0.00 0.00 0.00 1.63
3197 3900 6.591062 CAGGACAAATGGGTTGAAATTATGTG 59.409 38.462 0.00 0.00 39.87 3.21
3201 3904 6.997476 ACAAATGGGTTGAAATTATGTGCTTT 59.003 30.769 0.00 0.00 39.87 3.51
3519 4224 7.449247 AGTTTTCTGACTAGAGATGCTCTTTT 58.551 34.615 1.88 0.00 41.50 2.27
3596 4301 7.993101 TCTTGAAAGATGATTGCAATTAGAGG 58.007 34.615 14.33 0.00 0.00 3.69
3663 4372 7.433708 TCAACGATTTGGCCATTACTATATG 57.566 36.000 6.09 0.00 33.06 1.78
3665 4374 7.172532 TCAACGATTTGGCCATTACTATATGAC 59.827 37.037 6.09 0.00 33.06 3.06
3666 4375 6.530120 ACGATTTGGCCATTACTATATGACA 58.470 36.000 6.09 0.00 0.00 3.58
3698 4407 6.976934 AGATTTCCTGAGATCTCTACTTCC 57.023 41.667 22.95 7.61 0.00 3.46
3704 4413 4.447290 CTGAGATCTCTACTTCCGACAGA 58.553 47.826 22.95 0.00 0.00 3.41
3734 4443 3.703001 CCAAACAAGGCTTCTCTCCTA 57.297 47.619 0.00 0.00 32.65 2.94
3735 4444 3.604582 CCAAACAAGGCTTCTCTCCTAG 58.395 50.000 0.00 0.00 32.65 3.02
3736 4445 3.604582 CAAACAAGGCTTCTCTCCTAGG 58.395 50.000 0.82 0.82 32.65 3.02
3737 4446 2.632763 ACAAGGCTTCTCTCCTAGGT 57.367 50.000 9.08 0.00 32.65 3.08
3743 4455 1.619977 GCTTCTCTCCTAGGTGGACCA 60.620 57.143 9.08 0.00 40.56 4.02
3807 4520 4.166144 ACCAAATATCCTGTTGAGGTAGGG 59.834 45.833 0.00 0.00 40.76 3.53
3812 4525 4.510167 ATCCTGTTGAGGTAGGGAATTG 57.490 45.455 0.00 0.00 40.76 2.32
3821 4534 1.066430 GGTAGGGAATTGTGAGCGTGA 60.066 52.381 0.00 0.00 0.00 4.35
3856 4569 7.692908 AAAACAGTGACGTATTTGGAAAATG 57.307 32.000 0.00 0.00 0.00 2.32
4037 4765 5.985911 TGCTTTGGATACCTAGTAAACCTC 58.014 41.667 0.00 0.00 0.00 3.85
4040 4768 6.882678 GCTTTGGATACCTAGTAAACCTCAAA 59.117 38.462 0.00 0.00 0.00 2.69
4113 4841 9.917129 TTTAAAGCCTATTTTAGTTTACTTGGC 57.083 29.630 0.00 0.00 38.24 4.52
4114 4842 7.533289 AAAGCCTATTTTAGTTTACTTGGCA 57.467 32.000 0.00 0.00 40.18 4.92
4115 4843 6.510879 AGCCTATTTTAGTTTACTTGGCAC 57.489 37.500 0.00 0.00 40.18 5.01
4116 4844 6.246163 AGCCTATTTTAGTTTACTTGGCACT 58.754 36.000 0.00 0.00 40.18 4.40
4120 4848 5.782893 TTTTAGTTTACTTGGCACTGCAT 57.217 34.783 2.82 0.00 0.00 3.96
4122 4850 5.782893 TTAGTTTACTTGGCACTGCATTT 57.217 34.783 2.82 0.00 0.00 2.32
4123 4851 4.670896 AGTTTACTTGGCACTGCATTTT 57.329 36.364 2.82 0.00 0.00 1.82
4124 4852 5.022282 AGTTTACTTGGCACTGCATTTTT 57.978 34.783 2.82 0.00 0.00 1.94
4125 4853 6.155475 AGTTTACTTGGCACTGCATTTTTA 57.845 33.333 2.82 0.00 0.00 1.52
4127 4855 6.868339 AGTTTACTTGGCACTGCATTTTTATC 59.132 34.615 2.82 0.00 0.00 1.75
4128 4856 4.870123 ACTTGGCACTGCATTTTTATCA 57.130 36.364 2.82 0.00 0.00 2.15
4129 4857 5.212532 ACTTGGCACTGCATTTTTATCAA 57.787 34.783 2.82 0.00 0.00 2.57
4130 4858 5.609423 ACTTGGCACTGCATTTTTATCAAA 58.391 33.333 2.82 0.00 0.00 2.69
4131 4859 6.054295 ACTTGGCACTGCATTTTTATCAAAA 58.946 32.000 2.82 0.00 36.30 2.44
4132 4860 5.921004 TGGCACTGCATTTTTATCAAAAC 57.079 34.783 2.82 0.00 34.63 2.43
4133 4861 4.754114 TGGCACTGCATTTTTATCAAAACC 59.246 37.500 2.82 0.00 34.63 3.27
4134 4862 4.143137 GGCACTGCATTTTTATCAAAACCG 60.143 41.667 2.82 0.00 34.63 4.44
4135 4863 4.666402 GCACTGCATTTTTATCAAAACCGC 60.666 41.667 0.00 2.76 34.63 5.68
4136 4864 4.447054 CACTGCATTTTTATCAAAACCGCA 59.553 37.500 9.47 9.47 39.56 5.69
4142 4870 7.763528 TGCATTTTTATCAAAACCGCATCTATT 59.236 29.630 6.85 0.00 38.11 1.73
4167 4911 6.739331 TGTGGACCCTAAAAATGAAAATGT 57.261 33.333 0.00 0.00 0.00 2.71
4282 5057 8.806429 TTGTTCTTTATGCATCTTCCATCTAA 57.194 30.769 0.19 0.00 0.00 2.10
4284 5059 9.412460 TGTTCTTTATGCATCTTCCATCTAATT 57.588 29.630 0.19 0.00 0.00 1.40
4318 5093 5.712152 CAGTTCCTGCTAATCCACTTTTT 57.288 39.130 0.00 0.00 0.00 1.94
4319 5094 6.817765 CAGTTCCTGCTAATCCACTTTTTA 57.182 37.500 0.00 0.00 0.00 1.52
4358 5133 2.301583 TGGTACTTGTGCACTGCATCTA 59.698 45.455 19.41 1.37 41.91 1.98
4415 5190 9.698309 GCTAACTCAATCTTGTTATGCTAGATA 57.302 33.333 0.00 0.00 38.41 1.98
4527 5302 0.327924 TGGACCAGGTATGCCTTGTG 59.672 55.000 11.46 0.45 44.18 3.33
4529 5304 1.679032 GGACCAGGTATGCCTTGTGAC 60.679 57.143 11.46 0.93 44.18 3.67
4552 5327 4.340617 CCCAAGGGTATAGAAGTTTTGCA 58.659 43.478 0.00 0.00 0.00 4.08
4636 5526 8.644216 TCACTAAAAATATGTATCGGCTCCTTA 58.356 33.333 0.00 0.00 0.00 2.69
4671 5564 8.006298 AGTAACTTCTCATGATAGGTCTCTTG 57.994 38.462 0.00 0.00 0.00 3.02
4674 5567 5.719085 ACTTCTCATGATAGGTCTCTTGTGT 59.281 40.000 0.00 0.00 0.00 3.72
4687 5580 5.048083 GGTCTCTTGTGTTCATATTTTGGCA 60.048 40.000 0.00 0.00 0.00 4.92
4699 5592 6.282167 TCATATTTTGGCATTTGTAGGCATG 58.718 36.000 0.00 0.00 41.43 4.06
4747 5640 3.102052 GGAACTATCCGGCGTTAATCA 57.898 47.619 6.01 0.00 35.59 2.57
4759 5652 5.220777 CCGGCGTTAATCATGTAGTGAAAAT 60.221 40.000 6.01 0.00 40.97 1.82
4765 5658 8.775884 CGTTAATCATGTAGTGAAAATCAAACG 58.224 33.333 0.00 0.00 40.97 3.60
4819 5712 6.872628 ATGCTTAATGATGATGACAATCGT 57.127 33.333 0.00 0.00 35.37 3.73
4821 5714 6.718388 TGCTTAATGATGATGACAATCGTTC 58.282 36.000 0.00 0.00 35.37 3.95
4878 5771 9.268282 AGGACTATGAGTAGATAACCAAAAGAA 57.732 33.333 0.00 0.00 0.00 2.52
4891 5784 9.639601 GATAACCAAAAGAAAATTAACTCTGGG 57.360 33.333 12.85 0.00 0.00 4.45
4928 5822 4.025040 TCAACATCTGCAAGGAACTCAT 57.975 40.909 0.00 0.00 38.49 2.90
4995 5890 9.696572 AGTAGGTGTGAGATATTAACACTTCTA 57.303 33.333 13.13 7.12 42.99 2.10
5062 5957 4.460382 TCGGGTAAAGACTTCATTACGACT 59.540 41.667 0.00 0.00 32.57 4.18
5149 6044 5.462122 GAGGTACCTCTCAGCACGATAGTT 61.462 50.000 31.12 0.00 43.51 2.24
5150 6045 7.439777 GAGGTACCTCTCAGCACGATAGTTG 62.440 52.000 31.12 0.00 43.51 3.16
5182 6077 6.737254 AACCGTGAAGTAAATATTCCTGTG 57.263 37.500 0.00 0.00 0.00 3.66
5264 6159 1.038681 TGGCATCATCATGGGTGCAC 61.039 55.000 8.80 8.80 39.27 4.57
5463 6358 5.992217 ACTAGTTCTTGAAACAGATGGACAC 59.008 40.000 0.00 0.00 0.00 3.67
5497 6392 7.499232 ACTTACTGAACTATTTGCCATATGACC 59.501 37.037 3.65 0.00 0.00 4.02
5528 6423 1.830477 AGGCTGAGACCAGATCTTCAC 59.170 52.381 0.00 0.00 43.02 3.18
5597 6492 2.037121 TCATGTTCTTCTGCACGGAAGA 59.963 45.455 16.21 16.21 46.57 2.87
5608 6503 2.766263 TGCACGGAAGAGGACTATTGAT 59.234 45.455 0.00 0.00 0.00 2.57
5758 6653 9.144747 CCATTAGATAATGAAGATACCGACAAG 57.855 37.037 13.02 0.00 44.40 3.16
5949 6844 0.764890 ACAAGTGAGCAAGGTAGCCA 59.235 50.000 0.00 0.00 34.23 4.75
6135 7030 4.541973 TGTTGTAGCAGTGACTGATCAT 57.458 40.909 18.18 1.03 37.14 2.45
6240 7146 6.072838 AGCTGTATGACTTTGTTCTGTTGATG 60.073 38.462 0.00 0.00 0.00 3.07
6650 7683 2.697751 TCTCTTGCCTAATCTCTGCCTC 59.302 50.000 0.00 0.00 0.00 4.70
6651 7684 2.433604 CTCTTGCCTAATCTCTGCCTCA 59.566 50.000 0.00 0.00 0.00 3.86
6652 7685 2.169352 TCTTGCCTAATCTCTGCCTCAC 59.831 50.000 0.00 0.00 0.00 3.51
6653 7686 0.833287 TGCCTAATCTCTGCCTCACC 59.167 55.000 0.00 0.00 0.00 4.02
6654 7687 1.127343 GCCTAATCTCTGCCTCACCT 58.873 55.000 0.00 0.00 0.00 4.00
6687 7720 9.965824 GCATGCAATTAATTAGTTTACCTATGT 57.034 29.630 14.21 0.00 0.00 2.29
6739 7772 3.498927 AGTGTTATCTACCGTTGGACG 57.501 47.619 0.00 0.00 42.11 4.79
6749 7782 2.494677 CGTTGGACGGAGGATCTCT 58.505 57.895 0.00 0.00 38.08 3.10
6750 7783 1.676746 CGTTGGACGGAGGATCTCTA 58.323 55.000 0.00 0.00 38.08 2.43
6751 7784 1.334243 CGTTGGACGGAGGATCTCTAC 59.666 57.143 0.00 0.00 38.08 2.59
6752 7785 2.657143 GTTGGACGGAGGATCTCTACT 58.343 52.381 0.00 0.00 33.73 2.57
6753 7786 2.619646 GTTGGACGGAGGATCTCTACTC 59.380 54.545 0.00 0.00 33.73 2.59
6763 7796 4.658063 AGGATCTCTACTCCTAATGGACG 58.342 47.826 0.00 0.00 41.42 4.79
6764 7797 4.351407 AGGATCTCTACTCCTAATGGACGA 59.649 45.833 0.00 0.00 41.42 4.20
6765 7798 5.071370 GGATCTCTACTCCTAATGGACGAA 58.929 45.833 0.00 0.00 37.46 3.85
6766 7799 5.712917 GGATCTCTACTCCTAATGGACGAAT 59.287 44.000 0.00 0.00 37.46 3.34
6767 7800 6.209788 GGATCTCTACTCCTAATGGACGAATT 59.790 42.308 0.00 0.00 37.46 2.17
6768 7801 6.392625 TCTCTACTCCTAATGGACGAATTG 57.607 41.667 0.00 0.00 37.46 2.32
6769 7802 5.302059 TCTCTACTCCTAATGGACGAATTGG 59.698 44.000 0.00 0.00 37.46 3.16
6770 7803 4.960469 TCTACTCCTAATGGACGAATTGGT 59.040 41.667 0.00 0.00 37.46 3.67
6771 7804 4.569719 ACTCCTAATGGACGAATTGGTT 57.430 40.909 0.00 0.00 37.46 3.67
6772 7805 4.261801 ACTCCTAATGGACGAATTGGTTG 58.738 43.478 0.00 0.00 37.46 3.77
6773 7806 4.019681 ACTCCTAATGGACGAATTGGTTGA 60.020 41.667 0.00 0.00 37.46 3.18
6774 7807 4.912586 TCCTAATGGACGAATTGGTTGAA 58.087 39.130 0.00 0.00 37.46 2.69
6775 7808 5.505780 TCCTAATGGACGAATTGGTTGAAT 58.494 37.500 0.00 0.00 37.46 2.57
6776 7809 6.654959 TCCTAATGGACGAATTGGTTGAATA 58.345 36.000 0.00 0.00 37.46 1.75
6777 7810 6.765989 TCCTAATGGACGAATTGGTTGAATAG 59.234 38.462 0.00 0.00 37.46 1.73
6778 7811 6.542370 CCTAATGGACGAATTGGTTGAATAGT 59.458 38.462 0.00 0.00 34.57 2.12
6779 7812 6.436843 AATGGACGAATTGGTTGAATAGTC 57.563 37.500 0.00 0.00 33.96 2.59
6780 7813 4.258543 TGGACGAATTGGTTGAATAGTCC 58.741 43.478 0.00 0.00 44.47 3.85
6781 7814 3.626217 GGACGAATTGGTTGAATAGTCCC 59.374 47.826 0.00 0.00 41.56 4.46
6782 7815 3.617284 ACGAATTGGTTGAATAGTCCCC 58.383 45.455 0.00 0.00 0.00 4.81
6783 7816 2.949644 CGAATTGGTTGAATAGTCCCCC 59.050 50.000 0.00 0.00 0.00 5.40
6799 7832 2.518933 CCCCCACTTTCAACCGGT 59.481 61.111 0.00 0.00 0.00 5.28
6800 7833 1.152631 CCCCCACTTTCAACCGGTT 60.153 57.895 15.86 15.86 0.00 4.44
6801 7834 0.757561 CCCCCACTTTCAACCGGTTT 60.758 55.000 19.55 0.00 0.00 3.27
6802 7835 1.479021 CCCCCACTTTCAACCGGTTTA 60.479 52.381 19.55 7.23 0.00 2.01
6803 7836 2.521126 CCCCACTTTCAACCGGTTTAT 58.479 47.619 19.55 0.00 0.00 1.40
6804 7837 2.894765 CCCCACTTTCAACCGGTTTATT 59.105 45.455 19.55 0.00 0.00 1.40
6805 7838 3.322541 CCCCACTTTCAACCGGTTTATTT 59.677 43.478 19.55 0.00 0.00 1.40
6806 7839 4.202274 CCCCACTTTCAACCGGTTTATTTT 60.202 41.667 19.55 0.00 0.00 1.82
6807 7840 4.986034 CCCACTTTCAACCGGTTTATTTTC 59.014 41.667 19.55 0.00 0.00 2.29
6808 7841 5.452077 CCCACTTTCAACCGGTTTATTTTCA 60.452 40.000 19.55 0.00 0.00 2.69
6809 7842 6.043411 CCACTTTCAACCGGTTTATTTTCAA 58.957 36.000 19.55 0.00 0.00 2.69
6810 7843 6.019398 CCACTTTCAACCGGTTTATTTTCAAC 60.019 38.462 19.55 0.00 0.00 3.18
6811 7844 6.019398 CACTTTCAACCGGTTTATTTTCAACC 60.019 38.462 19.55 0.00 40.46 3.77
6821 7854 7.542534 GGTTTATTTTCAACCGGTTTTTCTT 57.457 32.000 19.55 5.58 34.59 2.52
6822 7855 7.623770 GGTTTATTTTCAACCGGTTTTTCTTC 58.376 34.615 19.55 3.05 34.59 2.87
6823 7856 7.331792 GTTTATTTTCAACCGGTTTTTCTTCG 58.668 34.615 19.55 4.46 0.00 3.79
6824 7857 4.437772 TTTTCAACCGGTTTTTCTTCGT 57.562 36.364 19.55 0.00 0.00 3.85
6825 7858 3.678915 TTCAACCGGTTTTTCTTCGTC 57.321 42.857 19.55 0.00 0.00 4.20
6826 7859 1.941975 TCAACCGGTTTTTCTTCGTCC 59.058 47.619 19.55 0.00 0.00 4.79
6827 7860 1.002142 CAACCGGTTTTTCTTCGTCCC 60.002 52.381 19.55 0.00 0.00 4.46
6828 7861 0.180878 ACCGGTTTTTCTTCGTCCCA 59.819 50.000 0.00 0.00 0.00 4.37
6829 7862 0.589708 CCGGTTTTTCTTCGTCCCAC 59.410 55.000 0.00 0.00 0.00 4.61
6830 7863 0.589708 CGGTTTTTCTTCGTCCCACC 59.410 55.000 0.00 0.00 0.00 4.61
6831 7864 1.812708 CGGTTTTTCTTCGTCCCACCT 60.813 52.381 0.00 0.00 0.00 4.00
6832 7865 1.878088 GGTTTTTCTTCGTCCCACCTC 59.122 52.381 0.00 0.00 0.00 3.85
6833 7866 1.878088 GTTTTTCTTCGTCCCACCTCC 59.122 52.381 0.00 0.00 0.00 4.30
6834 7867 0.399075 TTTTCTTCGTCCCACCTCCC 59.601 55.000 0.00 0.00 0.00 4.30
6835 7868 0.765135 TTTCTTCGTCCCACCTCCCA 60.765 55.000 0.00 0.00 0.00 4.37
6836 7869 1.477685 TTCTTCGTCCCACCTCCCAC 61.478 60.000 0.00 0.00 0.00 4.61
6837 7870 2.926242 TTCGTCCCACCTCCCACC 60.926 66.667 0.00 0.00 0.00 4.61
6838 7871 3.777818 TTCGTCCCACCTCCCACCA 62.778 63.158 0.00 0.00 0.00 4.17
6839 7872 3.706373 CGTCCCACCTCCCACCAG 61.706 72.222 0.00 0.00 0.00 4.00
6840 7873 4.035102 GTCCCACCTCCCACCAGC 62.035 72.222 0.00 0.00 0.00 4.85
6856 7889 4.295199 GCCCCTCCCACCGGTTTT 62.295 66.667 2.97 0.00 0.00 2.43
6857 7890 2.524044 CCCCTCCCACCGGTTTTT 59.476 61.111 2.97 0.00 0.00 1.94
6858 7891 1.605451 CCCCTCCCACCGGTTTTTC 60.605 63.158 2.97 0.00 0.00 2.29
6859 7892 1.458927 CCCTCCCACCGGTTTTTCT 59.541 57.895 2.97 0.00 0.00 2.52
6860 7893 0.608308 CCCTCCCACCGGTTTTTCTC 60.608 60.000 2.97 0.00 0.00 2.87
6861 7894 0.400594 CCTCCCACCGGTTTTTCTCT 59.599 55.000 2.97 0.00 0.00 3.10
6862 7895 1.202891 CCTCCCACCGGTTTTTCTCTT 60.203 52.381 2.97 0.00 0.00 2.85
6863 7896 2.583143 CTCCCACCGGTTTTTCTCTTT 58.417 47.619 2.97 0.00 0.00 2.52
6864 7897 2.956333 CTCCCACCGGTTTTTCTCTTTT 59.044 45.455 2.97 0.00 0.00 2.27
6865 7898 2.953648 TCCCACCGGTTTTTCTCTTTTC 59.046 45.455 2.97 0.00 0.00 2.29
6866 7899 2.956333 CCCACCGGTTTTTCTCTTTTCT 59.044 45.455 2.97 0.00 0.00 2.52
6867 7900 3.004419 CCCACCGGTTTTTCTCTTTTCTC 59.996 47.826 2.97 0.00 0.00 2.87
6868 7901 3.303791 CCACCGGTTTTTCTCTTTTCTCG 60.304 47.826 2.97 0.00 0.00 4.04
6869 7902 3.311596 CACCGGTTTTTCTCTTTTCTCGT 59.688 43.478 2.97 0.00 0.00 4.18
6870 7903 3.558829 ACCGGTTTTTCTCTTTTCTCGTC 59.441 43.478 0.00 0.00 0.00 4.20
6871 7904 3.808174 CCGGTTTTTCTCTTTTCTCGTCT 59.192 43.478 0.00 0.00 0.00 4.18
6872 7905 4.318831 CCGGTTTTTCTCTTTTCTCGTCTG 60.319 45.833 0.00 0.00 0.00 3.51
6873 7906 4.506654 CGGTTTTTCTCTTTTCTCGTCTGA 59.493 41.667 0.00 0.00 0.00 3.27
6874 7907 5.556570 CGGTTTTTCTCTTTTCTCGTCTGAC 60.557 44.000 0.00 0.00 0.00 3.51
6875 7908 5.277393 GGTTTTTCTCTTTTCTCGTCTGACC 60.277 44.000 1.55 0.00 0.00 4.02
6876 7909 2.991434 TCTCTTTTCTCGTCTGACCG 57.009 50.000 1.55 0.00 0.00 4.79
6877 7910 1.540267 TCTCTTTTCTCGTCTGACCGG 59.460 52.381 0.00 0.00 0.00 5.28
6878 7911 0.038526 TCTTTTCTCGTCTGACCGGC 60.039 55.000 0.00 0.00 0.00 6.13
6879 7912 0.319555 CTTTTCTCGTCTGACCGGCA 60.320 55.000 0.00 0.00 0.00 5.69
6880 7913 0.105224 TTTTCTCGTCTGACCGGCAA 59.895 50.000 0.00 0.00 0.00 4.52
6881 7914 0.320374 TTTCTCGTCTGACCGGCAAT 59.680 50.000 0.00 0.00 0.00 3.56
6882 7915 1.179152 TTCTCGTCTGACCGGCAATA 58.821 50.000 0.00 0.00 0.00 1.90
6883 7916 1.399714 TCTCGTCTGACCGGCAATAT 58.600 50.000 0.00 0.00 0.00 1.28
6884 7917 1.337071 TCTCGTCTGACCGGCAATATC 59.663 52.381 0.00 0.00 0.00 1.63
6885 7918 0.387929 TCGTCTGACCGGCAATATCC 59.612 55.000 0.00 0.00 0.00 2.59
6886 7919 0.104120 CGTCTGACCGGCAATATCCA 59.896 55.000 0.00 0.00 0.00 3.41
6887 7920 1.472552 CGTCTGACCGGCAATATCCAA 60.473 52.381 0.00 0.00 0.00 3.53
6888 7921 1.940613 GTCTGACCGGCAATATCCAAC 59.059 52.381 0.00 0.00 0.00 3.77
6889 7922 0.937304 CTGACCGGCAATATCCAACG 59.063 55.000 0.00 0.00 0.00 4.10
6890 7923 0.250793 TGACCGGCAATATCCAACGT 59.749 50.000 0.00 0.00 0.00 3.99
6891 7924 1.481363 TGACCGGCAATATCCAACGTA 59.519 47.619 0.00 0.00 0.00 3.57
6892 7925 2.103432 TGACCGGCAATATCCAACGTAT 59.897 45.455 0.00 0.00 0.00 3.06
6893 7926 3.135994 GACCGGCAATATCCAACGTATT 58.864 45.455 0.00 0.00 0.00 1.89
6894 7927 3.547746 ACCGGCAATATCCAACGTATTT 58.452 40.909 0.00 0.00 0.00 1.40
6895 7928 4.706035 ACCGGCAATATCCAACGTATTTA 58.294 39.130 0.00 0.00 0.00 1.40
6896 7929 5.310451 ACCGGCAATATCCAACGTATTTAT 58.690 37.500 0.00 0.00 0.00 1.40
6897 7930 5.180492 ACCGGCAATATCCAACGTATTTATG 59.820 40.000 0.00 0.00 0.00 1.90
6898 7931 5.391523 CCGGCAATATCCAACGTATTTATGG 60.392 44.000 0.00 0.00 35.49 2.74
6899 7932 5.180492 CGGCAATATCCAACGTATTTATGGT 59.820 40.000 3.26 0.00 35.66 3.55
6900 7933 6.369340 CGGCAATATCCAACGTATTTATGGTA 59.631 38.462 3.26 0.00 35.66 3.25
6901 7934 7.095144 CGGCAATATCCAACGTATTTATGGTAA 60.095 37.037 3.26 0.00 35.66 2.85
6902 7935 8.736244 GGCAATATCCAACGTATTTATGGTAAT 58.264 33.333 3.26 0.00 35.66 1.89
6903 7936 9.769093 GCAATATCCAACGTATTTATGGTAATC 57.231 33.333 3.26 0.00 35.66 1.75
6908 7941 8.966069 TCCAACGTATTTATGGTAATCAATCA 57.034 30.769 3.26 0.00 35.66 2.57
6909 7942 9.567776 TCCAACGTATTTATGGTAATCAATCAT 57.432 29.630 3.26 0.00 35.66 2.45
6922 7955 9.567776 TGGTAATCAATCATAATTAATCCACGT 57.432 29.630 0.00 0.00 0.00 4.49
6942 7975 9.923143 TCCACGTATAGTAATAAATCAATCCAG 57.077 33.333 0.00 0.00 0.00 3.86
6943 7976 9.151471 CCACGTATAGTAATAAATCAATCCAGG 57.849 37.037 0.00 0.00 0.00 4.45
6944 7977 9.706691 CACGTATAGTAATAAATCAATCCAGGT 57.293 33.333 0.00 0.00 0.00 4.00
6961 7994 5.888982 CCAGGTATGGTAAGGTCATAACT 57.111 43.478 0.00 0.00 43.57 2.24
6962 7995 5.855045 CCAGGTATGGTAAGGTCATAACTC 58.145 45.833 0.00 0.00 41.60 3.01
6963 7996 5.365605 CCAGGTATGGTAAGGTCATAACTCA 59.634 44.000 0.00 0.00 41.60 3.41
6964 7997 6.463049 CCAGGTATGGTAAGGTCATAACTCAG 60.463 46.154 0.00 0.00 41.60 3.35
6965 7998 5.602978 AGGTATGGTAAGGTCATAACTCAGG 59.397 44.000 0.00 0.00 40.04 3.86
6966 7999 5.601313 GGTATGGTAAGGTCATAACTCAGGA 59.399 44.000 0.00 0.00 33.35 3.86
6967 8000 6.099269 GGTATGGTAAGGTCATAACTCAGGAA 59.901 42.308 0.00 0.00 33.35 3.36
6968 8001 6.636454 ATGGTAAGGTCATAACTCAGGAAA 57.364 37.500 0.00 0.00 0.00 3.13
6969 8002 6.636454 TGGTAAGGTCATAACTCAGGAAAT 57.364 37.500 0.00 0.00 0.00 2.17
6970 8003 7.027874 TGGTAAGGTCATAACTCAGGAAATT 57.972 36.000 0.00 0.00 0.00 1.82
6971 8004 7.466804 TGGTAAGGTCATAACTCAGGAAATTT 58.533 34.615 0.00 0.00 0.00 1.82
6972 8005 7.947890 TGGTAAGGTCATAACTCAGGAAATTTT 59.052 33.333 0.00 0.00 0.00 1.82
6973 8006 8.244113 GGTAAGGTCATAACTCAGGAAATTTTG 58.756 37.037 0.00 0.00 0.00 2.44
6974 8007 9.010029 GTAAGGTCATAACTCAGGAAATTTTGA 57.990 33.333 0.00 0.00 0.00 2.69
6975 8008 8.477419 AAGGTCATAACTCAGGAAATTTTGAA 57.523 30.769 0.00 0.00 0.00 2.69
6976 8009 8.655935 AGGTCATAACTCAGGAAATTTTGAAT 57.344 30.769 0.00 0.00 0.00 2.57
6977 8010 9.753674 AGGTCATAACTCAGGAAATTTTGAATA 57.246 29.630 0.00 0.00 0.00 1.75
7022 8055 8.616799 AATTTAAATTACCCCAAAGGCTATCA 57.383 30.769 11.76 0.00 40.58 2.15
7023 8056 8.616799 ATTTAAATTACCCCAAAGGCTATCAA 57.383 30.769 0.00 0.00 40.58 2.57
7024 8057 8.616799 TTTAAATTACCCCAAAGGCTATCAAT 57.383 30.769 0.00 0.00 40.58 2.57
7025 8058 6.731292 AAATTACCCCAAAGGCTATCAATC 57.269 37.500 0.00 0.00 40.58 2.67
7026 8059 2.755952 ACCCCAAAGGCTATCAATCC 57.244 50.000 0.00 0.00 40.58 3.01
7027 8060 1.929494 ACCCCAAAGGCTATCAATCCA 59.071 47.619 0.00 0.00 40.58 3.41
7028 8061 2.091665 ACCCCAAAGGCTATCAATCCAG 60.092 50.000 0.00 0.00 40.58 3.86
7029 8062 2.590821 CCCAAAGGCTATCAATCCAGG 58.409 52.381 0.00 0.00 0.00 4.45
7030 8063 2.091665 CCCAAAGGCTATCAATCCAGGT 60.092 50.000 0.00 0.00 0.00 4.00
7031 8064 3.138283 CCCAAAGGCTATCAATCCAGGTA 59.862 47.826 0.00 0.00 0.00 3.08
7032 8065 4.202609 CCCAAAGGCTATCAATCCAGGTAT 60.203 45.833 0.00 0.00 0.00 2.73
7033 8066 4.763793 CCAAAGGCTATCAATCCAGGTATG 59.236 45.833 0.00 0.00 0.00 2.39
7051 8084 1.868713 TGGTAAGGCCATAACTCGGA 58.131 50.000 5.01 0.00 43.61 4.55
7052 8085 2.189676 TGGTAAGGCCATAACTCGGAA 58.810 47.619 5.01 0.00 43.61 4.30
7053 8086 2.572556 TGGTAAGGCCATAACTCGGAAA 59.427 45.455 5.01 0.00 43.61 3.13
7054 8087 3.009253 TGGTAAGGCCATAACTCGGAAAA 59.991 43.478 5.01 0.00 43.61 2.29
7055 8088 4.204799 GGTAAGGCCATAACTCGGAAAAT 58.795 43.478 5.01 0.00 37.17 1.82
7056 8089 5.104444 TGGTAAGGCCATAACTCGGAAAATA 60.104 40.000 5.01 0.00 43.61 1.40
7057 8090 6.002082 GGTAAGGCCATAACTCGGAAAATAT 58.998 40.000 5.01 0.00 37.17 1.28
7058 8091 6.148976 GGTAAGGCCATAACTCGGAAAATATC 59.851 42.308 5.01 0.00 37.17 1.63
7059 8092 4.315803 AGGCCATAACTCGGAAAATATCG 58.684 43.478 5.01 0.00 0.00 2.92
7060 8093 4.039973 AGGCCATAACTCGGAAAATATCGA 59.960 41.667 5.01 0.00 0.00 3.59
7061 8094 4.753107 GGCCATAACTCGGAAAATATCGAA 59.247 41.667 0.00 0.00 34.87 3.71
7062 8095 5.411669 GGCCATAACTCGGAAAATATCGAAT 59.588 40.000 0.00 0.00 34.87 3.34
7063 8096 6.592607 GGCCATAACTCGGAAAATATCGAATA 59.407 38.462 0.00 0.00 34.87 1.75
7064 8097 7.280205 GGCCATAACTCGGAAAATATCGAATAT 59.720 37.037 0.00 0.00 34.87 1.28
7065 8098 8.116753 GCCATAACTCGGAAAATATCGAATATG 58.883 37.037 0.00 0.00 36.33 1.78
7066 8099 8.604035 CCATAACTCGGAAAATATCGAATATGG 58.396 37.037 15.83 15.83 42.28 2.74
7067 8100 9.151471 CATAACTCGGAAAATATCGAATATGGT 57.849 33.333 0.00 0.00 34.83 3.55
7070 8103 9.720769 AACTCGGAAAATATCGAATATGGTAAT 57.279 29.630 0.00 0.00 34.87 1.89
7106 8139 1.697982 CCAGGTATGGTAAGGCTACCC 59.302 57.143 9.65 3.59 46.39 3.69
7107 8140 2.404559 CAGGTATGGTAAGGCTACCCA 58.595 52.381 7.44 7.44 46.39 4.51
7108 8141 2.104281 CAGGTATGGTAAGGCTACCCAC 59.896 54.545 7.17 6.77 46.39 4.61
7109 8142 1.069668 GGTATGGTAAGGCTACCCACG 59.930 57.143 7.17 0.00 46.39 4.94
7110 8143 1.758862 GTATGGTAAGGCTACCCACGT 59.241 52.381 7.17 0.00 46.39 4.49
7111 8144 2.163810 ATGGTAAGGCTACCCACGTA 57.836 50.000 7.17 0.00 46.39 3.57
7112 8145 2.163810 TGGTAAGGCTACCCACGTAT 57.836 50.000 9.65 0.00 46.39 3.06
7113 8146 3.311167 TGGTAAGGCTACCCACGTATA 57.689 47.619 9.65 0.00 46.39 1.47
7114 8147 3.225104 TGGTAAGGCTACCCACGTATAG 58.775 50.000 9.65 0.00 46.39 1.31
7115 8148 3.225940 GGTAAGGCTACCCACGTATAGT 58.774 50.000 0.00 0.00 41.77 2.12
7116 8149 4.141274 TGGTAAGGCTACCCACGTATAGTA 60.141 45.833 9.65 0.00 46.39 1.82
7117 8150 4.827284 GGTAAGGCTACCCACGTATAGTAA 59.173 45.833 0.00 0.00 41.77 2.24
7118 8151 5.478332 GGTAAGGCTACCCACGTATAGTAAT 59.522 44.000 0.00 0.00 41.77 1.89
7119 8152 6.659242 GGTAAGGCTACCCACGTATAGTAATA 59.341 42.308 0.00 0.00 41.77 0.98
7120 8153 7.176690 GGTAAGGCTACCCACGTATAGTAATAA 59.823 40.741 0.00 0.00 41.77 1.40
7121 8154 7.601705 AAGGCTACCCACGTATAGTAATAAA 57.398 36.000 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 67 2.745968 TCCAACAAAGCCTGGAAACTT 58.254 42.857 0.00 0.00 38.81 2.66
67 68 2.452600 TCCAACAAAGCCTGGAAACT 57.547 45.000 0.00 0.00 38.81 2.66
79 80 7.278135 TCAAATCATCCAACAAAATCCAACAA 58.722 30.769 0.00 0.00 0.00 2.83
80 81 6.824553 TCAAATCATCCAACAAAATCCAACA 58.175 32.000 0.00 0.00 0.00 3.33
81 82 7.603404 TCATCAAATCATCCAACAAAATCCAAC 59.397 33.333 0.00 0.00 0.00 3.77
82 83 7.677892 TCATCAAATCATCCAACAAAATCCAA 58.322 30.769 0.00 0.00 0.00 3.53
83 84 7.242322 TCATCAAATCATCCAACAAAATCCA 57.758 32.000 0.00 0.00 0.00 3.41
84 85 9.991906 ATATCATCAAATCATCCAACAAAATCC 57.008 29.630 0.00 0.00 0.00 3.01
86 87 9.687210 CGATATCATCAAATCATCCAACAAAAT 57.313 29.630 3.12 0.00 0.00 1.82
87 88 7.648908 GCGATATCATCAAATCATCCAACAAAA 59.351 33.333 3.12 0.00 0.00 2.44
88 89 7.140705 GCGATATCATCAAATCATCCAACAAA 58.859 34.615 3.12 0.00 0.00 2.83
89 90 6.262720 TGCGATATCATCAAATCATCCAACAA 59.737 34.615 3.12 0.00 0.00 2.83
90 91 5.764192 TGCGATATCATCAAATCATCCAACA 59.236 36.000 3.12 0.00 0.00 3.33
105 106 4.729227 TCAACTTGGTACTGCGATATCA 57.271 40.909 3.12 0.00 0.00 2.15
123 124 6.459024 CCGTCCTACAAACTGAAAATGTTCAA 60.459 38.462 0.00 0.00 43.18 2.69
125 126 5.237779 TCCGTCCTACAAACTGAAAATGTTC 59.762 40.000 0.00 0.00 0.00 3.18
126 127 5.127491 TCCGTCCTACAAACTGAAAATGTT 58.873 37.500 0.00 0.00 0.00 2.71
128 129 5.682943 TTCCGTCCTACAAACTGAAAATG 57.317 39.130 0.00 0.00 0.00 2.32
129 130 6.544564 TCTTTTCCGTCCTACAAACTGAAAAT 59.455 34.615 6.20 0.00 38.38 1.82
136 138 3.744942 GGTCTCTTTTCCGTCCTACAAAC 59.255 47.826 0.00 0.00 0.00 2.93
149 151 5.774690 TGCACCAAATGATAAGGTCTCTTTT 59.225 36.000 0.00 0.00 34.59 2.27
155 157 3.758554 AGTGTGCACCAAATGATAAGGTC 59.241 43.478 15.69 0.00 32.15 3.85
160 162 6.714810 AGTTTCTTAGTGTGCACCAAATGATA 59.285 34.615 15.69 0.25 0.00 2.15
164 166 5.133221 AGAGTTTCTTAGTGTGCACCAAAT 58.867 37.500 15.69 0.00 0.00 2.32
186 188 3.651803 AGACTTGGTTCTCTTGTCGAG 57.348 47.619 0.00 0.00 41.30 4.04
189 191 7.612677 TCCTTAATAGACTTGGTTCTCTTGTC 58.387 38.462 0.00 0.00 0.00 3.18
199 201 5.277538 GCGCATTCTTCCTTAATAGACTTGG 60.278 44.000 0.30 0.00 0.00 3.61
201 203 5.294552 GTGCGCATTCTTCCTTAATAGACTT 59.705 40.000 15.91 0.00 0.00 3.01
210 212 2.870372 GCGTGCGCATTCTTCCTT 59.130 55.556 15.91 0.00 41.49 3.36
228 231 2.493278 AGGGATAAACAAGTGTGCATGC 59.507 45.455 11.82 11.82 0.00 4.06
232 235 5.414454 TGTTCATAGGGATAAACAAGTGTGC 59.586 40.000 0.00 0.00 0.00 4.57
233 236 6.128007 GGTGTTCATAGGGATAAACAAGTGTG 60.128 42.308 0.00 0.00 33.75 3.82
239 242 4.785914 TGAGGGTGTTCATAGGGATAAACA 59.214 41.667 0.00 0.00 0.00 2.83
242 245 6.216662 TCTTTTGAGGGTGTTCATAGGGATAA 59.783 38.462 0.00 0.00 0.00 1.75
272 275 7.598759 ATTTCGGTACAGAGGTAGTATCAAT 57.401 36.000 0.00 0.00 0.00 2.57
273 276 8.701908 ATATTTCGGTACAGAGGTAGTATCAA 57.298 34.615 0.00 0.00 0.00 2.57
358 362 8.035394 AGCGACTTTGTCAATCTTAAGATCTAA 58.965 33.333 18.19 8.46 32.75 2.10
402 406 3.272581 TCAGTGGTATGACATGCATGTG 58.727 45.455 35.92 18.03 41.95 3.21
403 407 3.632643 TCAGTGGTATGACATGCATGT 57.367 42.857 31.82 31.82 45.16 3.21
404 408 4.968812 TTTCAGTGGTATGACATGCATG 57.031 40.909 25.09 25.09 37.87 4.06
405 409 5.981088 TTTTTCAGTGGTATGACATGCAT 57.019 34.783 5.85 0.00 41.08 3.96
454 476 0.667453 TGTGCTCGCATGCTTTTTGA 59.333 45.000 17.13 3.99 0.00 2.69
462 484 2.137523 TGCTATATGTGTGCTCGCATG 58.862 47.619 21.73 8.90 43.46 4.06
478 500 7.715249 AGCCGAATTCAAGTATTAGATTTGCTA 59.285 33.333 6.22 0.00 0.00 3.49
479 501 6.543831 AGCCGAATTCAAGTATTAGATTTGCT 59.456 34.615 6.22 0.00 0.00 3.91
490 512 1.448985 GGTGCAGCCGAATTCAAGTA 58.551 50.000 4.03 0.00 0.00 2.24
503 525 2.684001 TTATGGTAGAACCGGTGCAG 57.316 50.000 16.99 0.00 42.58 4.41
562 584 4.704965 AGACTCCTTAAACAACACTGGAC 58.295 43.478 0.00 0.00 0.00 4.02
563 585 4.202326 GGAGACTCCTTAAACAACACTGGA 60.202 45.833 14.72 0.00 32.53 3.86
564 586 4.065789 GGAGACTCCTTAAACAACACTGG 58.934 47.826 14.72 0.00 32.53 4.00
565 587 3.741344 CGGAGACTCCTTAAACAACACTG 59.259 47.826 19.39 0.00 33.30 3.66
566 588 3.802675 GCGGAGACTCCTTAAACAACACT 60.803 47.826 19.39 0.00 33.30 3.55
629 651 4.044191 ACAGGTTAGACCCCAAGCTTAATT 59.956 41.667 0.00 0.00 39.75 1.40
654 676 1.267121 TGAAGTCTAGGACACTGGGC 58.733 55.000 0.52 0.00 34.60 5.36
681 703 3.673809 GCGAGAACACCAACAACTACTAG 59.326 47.826 0.00 0.00 0.00 2.57
686 714 1.670811 CTTGCGAGAACACCAACAACT 59.329 47.619 0.00 0.00 0.00 3.16
687 715 1.268539 CCTTGCGAGAACACCAACAAC 60.269 52.381 1.22 0.00 0.00 3.32
688 716 1.021202 CCTTGCGAGAACACCAACAA 58.979 50.000 1.22 0.00 0.00 2.83
799 827 4.373116 GGGCCGTGCGAGAGACAA 62.373 66.667 0.00 0.00 0.00 3.18
851 879 2.043227 GAGGGAGGGTGAGGATACAAG 58.957 57.143 0.00 0.00 41.41 3.16
936 964 1.220477 GTCTCTGCAGAAGGGAGGC 59.780 63.158 18.85 3.02 35.46 4.70
1047 1075 2.264794 CCCGACAGCACCAGGTAC 59.735 66.667 0.00 0.00 0.00 3.34
1417 1464 5.294552 AGAGAAAAATAAAATCTCGCGGGAG 59.705 40.000 22.60 22.60 43.40 4.30
1418 1465 5.183228 AGAGAAAAATAAAATCTCGCGGGA 58.817 37.500 13.04 13.04 43.40 5.14
1419 1466 5.485662 AGAGAAAAATAAAATCTCGCGGG 57.514 39.130 6.13 1.01 43.40 6.13
1420 1467 6.776094 AGAAGAGAAAAATAAAATCTCGCGG 58.224 36.000 6.13 0.00 43.40 6.46
1459 1506 3.792047 CGCATCACCACAGCACCG 61.792 66.667 0.00 0.00 0.00 4.94
1460 1507 1.375396 TACGCATCACCACAGCACC 60.375 57.895 0.00 0.00 0.00 5.01
1461 1508 1.787847 GTACGCATCACCACAGCAC 59.212 57.895 0.00 0.00 0.00 4.40
1462 1509 1.736282 CGTACGCATCACCACAGCA 60.736 57.895 0.52 0.00 0.00 4.41
1463 1510 2.452813 CCGTACGCATCACCACAGC 61.453 63.158 10.49 0.00 0.00 4.40
1518 1565 1.478510 AGAGACGCCGACAATCTTGAT 59.521 47.619 0.00 0.00 0.00 2.57
1531 1578 3.498397 TCCAAACAAGATCAAAGAGACGC 59.502 43.478 0.00 0.00 0.00 5.19
1807 2419 2.898705 CGATTGCTTCCTGCTACTCTT 58.101 47.619 0.00 0.00 43.37 2.85
1848 2460 9.131791 ACCAAATCCCAACAATCATATAAGTAC 57.868 33.333 0.00 0.00 0.00 2.73
1925 2538 9.924010 TCTAAACTAGGCTCTCTAGAAGTTAAT 57.076 33.333 5.83 0.00 46.48 1.40
2015 2630 3.826157 CTCCCAGCATCAACCAACTAAAA 59.174 43.478 0.00 0.00 0.00 1.52
2207 2822 1.880027 GCTCACGTTGGTTTCTCCATT 59.120 47.619 0.00 0.00 46.60 3.16
2219 2834 0.107410 TGAACCAACTGGCTCACGTT 60.107 50.000 0.00 0.00 35.54 3.99
2628 3248 8.089115 AGATCGCTGGAGCTTAAATTAATTAC 57.911 34.615 0.01 0.00 34.68 1.89
2658 3278 6.625300 CTGCTTCAGATCTAGCAATTGCTTTT 60.625 38.462 35.99 21.23 45.89 2.27
2665 3285 4.841422 ACAACTGCTTCAGATCTAGCAAT 58.159 39.130 18.47 8.40 45.89 3.56
2675 3295 9.809096 TTAGATCTAATCTAACAACTGCTTCAG 57.191 33.333 11.24 0.00 44.56 3.02
3182 3885 5.334028 GCACAAAAGCACATAATTTCAACCC 60.334 40.000 0.00 0.00 0.00 4.11
3197 3900 2.537214 GCTTCAGAAACTGCACAAAAGC 59.463 45.455 0.00 0.00 32.29 3.51
3201 3904 1.677576 CAGGCTTCAGAAACTGCACAA 59.322 47.619 2.48 0.00 0.00 3.33
3627 4336 5.393027 GCCAAATCGTTGATGATTACCACTT 60.393 40.000 0.00 0.00 37.59 3.16
3663 4372 9.638239 GATCTCAGGAAATCTATAATCTGTGTC 57.362 37.037 0.00 0.00 0.00 3.67
3665 4374 9.859427 GAGATCTCAGGAAATCTATAATCTGTG 57.141 37.037 18.11 0.00 32.43 3.66
3666 4375 9.827198 AGAGATCTCAGGAAATCTATAATCTGT 57.173 33.333 24.39 0.00 32.43 3.41
3697 4406 1.812922 GGCAGTGCATCTCTGTCGG 60.813 63.158 18.61 0.00 35.60 4.79
3698 4407 0.671472 TTGGCAGTGCATCTCTGTCG 60.671 55.000 18.61 0.00 39.98 4.35
3704 4413 0.963962 CCTTGTTTGGCAGTGCATCT 59.036 50.000 18.61 0.00 0.00 2.90
3734 4443 1.761174 GGTGTGTCATGGTCCACCT 59.239 57.895 16.52 0.00 43.21 4.00
3735 4444 0.110486 AAGGTGTGTCATGGTCCACC 59.890 55.000 16.22 16.22 46.17 4.61
3736 4445 1.981256 AAAGGTGTGTCATGGTCCAC 58.019 50.000 0.00 0.00 0.00 4.02
3737 4446 2.305928 CAAAAGGTGTGTCATGGTCCA 58.694 47.619 0.00 0.00 0.00 4.02
3743 4455 8.686334 GTTCATATATTCCAAAAGGTGTGTCAT 58.314 33.333 0.00 0.00 0.00 3.06
3832 4545 7.484975 TCATTTTCCAAATACGTCACTGTTTT 58.515 30.769 0.00 0.00 0.00 2.43
3873 4586 5.067273 TCAGCACCGGAAAATCTTAAGAAA 58.933 37.500 9.46 0.00 0.00 2.52
4111 4839 4.143137 CGGTTTTGATAAAAATGCAGTGCC 60.143 41.667 13.72 0.00 31.13 5.01
4113 4841 4.447054 TGCGGTTTTGATAAAAATGCAGTG 59.553 37.500 11.96 0.00 37.64 3.66
4114 4842 4.626042 TGCGGTTTTGATAAAAATGCAGT 58.374 34.783 11.96 0.00 37.64 4.40
4115 4843 5.577945 AGATGCGGTTTTGATAAAAATGCAG 59.422 36.000 17.89 0.07 42.30 4.41
4116 4844 5.477510 AGATGCGGTTTTGATAAAAATGCA 58.522 33.333 16.22 16.22 42.82 3.96
4120 4848 9.482627 ACAAAATAGATGCGGTTTTGATAAAAA 57.517 25.926 14.48 0.00 42.47 1.94
4122 4850 7.543868 CCACAAAATAGATGCGGTTTTGATAAA 59.456 33.333 14.48 0.00 42.47 1.40
4123 4851 7.032580 CCACAAAATAGATGCGGTTTTGATAA 58.967 34.615 14.48 0.00 42.47 1.75
4124 4852 6.375736 TCCACAAAATAGATGCGGTTTTGATA 59.624 34.615 14.48 0.36 42.47 2.15
4125 4853 5.184864 TCCACAAAATAGATGCGGTTTTGAT 59.815 36.000 14.48 0.09 42.47 2.57
4127 4855 4.621034 GTCCACAAAATAGATGCGGTTTTG 59.379 41.667 7.91 7.91 44.32 2.44
4128 4856 4.321675 GGTCCACAAAATAGATGCGGTTTT 60.322 41.667 0.00 0.00 0.00 2.43
4129 4857 3.192633 GGTCCACAAAATAGATGCGGTTT 59.807 43.478 0.00 0.00 0.00 3.27
4130 4858 2.752903 GGTCCACAAAATAGATGCGGTT 59.247 45.455 0.00 0.00 0.00 4.44
4131 4859 2.365582 GGTCCACAAAATAGATGCGGT 58.634 47.619 0.00 0.00 0.00 5.68
4132 4860 1.676006 GGGTCCACAAAATAGATGCGG 59.324 52.381 0.00 0.00 0.00 5.69
4133 4861 2.643551 AGGGTCCACAAAATAGATGCG 58.356 47.619 0.00 0.00 0.00 4.73
4134 4862 6.524101 TTTTAGGGTCCACAAAATAGATGC 57.476 37.500 0.00 0.00 0.00 3.91
4135 4863 8.748412 TCATTTTTAGGGTCCACAAAATAGATG 58.252 33.333 8.10 0.00 29.64 2.90
4136 4864 8.893563 TCATTTTTAGGGTCCACAAAATAGAT 57.106 30.769 8.10 0.00 29.64 1.98
4142 4870 7.569240 ACATTTTCATTTTTAGGGTCCACAAA 58.431 30.769 0.00 0.00 0.00 2.83
4185 4929 9.220767 AGGTTTGATAGATCTTAGAACACAAAC 57.779 33.333 19.53 19.53 41.67 2.93
4335 5110 1.756430 TGCAGTGCACAAGTACCAAA 58.244 45.000 21.04 0.00 31.71 3.28
4339 5114 3.614616 GTCTAGATGCAGTGCACAAGTAC 59.385 47.826 22.44 12.57 43.04 2.73
4408 5183 5.337009 CCCATTGAATGCCCAATTATCTAGC 60.337 44.000 0.00 0.00 34.77 3.42
4415 5190 1.065272 GCACCCATTGAATGCCCAATT 60.065 47.619 0.00 0.00 34.77 2.32
4587 5477 9.887406 GTGAGAGAAAATTAACAAACGGAAATA 57.113 29.630 0.00 0.00 0.00 1.40
4608 5498 7.015292 AGGAGCCGATACATATTTTTAGTGAGA 59.985 37.037 0.00 0.00 0.00 3.27
4621 5511 4.481368 TTTGTGTAAGGAGCCGATACAT 57.519 40.909 10.10 0.00 32.65 2.29
4656 5549 8.899427 AATATGAACACAAGAGACCTATCATG 57.101 34.615 0.00 0.00 0.00 3.07
4663 5556 5.048083 TGCCAAAATATGAACACAAGAGACC 60.048 40.000 0.00 0.00 0.00 3.85
4671 5564 6.035975 GCCTACAAATGCCAAAATATGAACAC 59.964 38.462 0.00 0.00 0.00 3.32
4674 5567 6.291648 TGCCTACAAATGCCAAAATATGAA 57.708 33.333 0.00 0.00 0.00 2.57
4699 5592 4.819769 TCTAAAAATGAATTGCAGGCCAC 58.180 39.130 5.01 0.00 0.00 5.01
4727 5620 3.102052 TGATTAACGCCGGATAGTTCC 57.898 47.619 5.05 2.28 38.81 3.62
4728 5621 4.056050 ACATGATTAACGCCGGATAGTTC 58.944 43.478 5.05 0.00 0.00 3.01
4747 5640 3.119990 CCGCCGTTTGATTTTCACTACAT 60.120 43.478 0.00 0.00 0.00 2.29
4783 5676 9.122779 TCATCATTAAGCATACATGTGAAATCA 57.877 29.630 9.11 0.00 0.00 2.57
4878 5771 7.121315 GCTCATACTTCAACCCAGAGTTAATTT 59.879 37.037 0.00 0.00 36.18 1.82
4891 5784 7.020010 CAGATGTTGAAAGCTCATACTTCAAC 58.980 38.462 24.43 24.43 37.73 3.18
4928 5822 4.652421 TTGCAGCATCAAGAAAGAACAA 57.348 36.364 0.00 0.00 0.00 2.83
4937 5831 3.358707 TCACAAGTTTGCAGCATCAAG 57.641 42.857 0.00 0.00 0.00 3.02
4968 5862 8.470805 AGAAGTGTTAATATCTCACACCTACTG 58.529 37.037 7.91 0.00 41.55 2.74
4995 5890 2.490903 CAAGCAGCTGGAAAATAGCAGT 59.509 45.455 17.12 0.00 43.53 4.40
5002 5897 1.000060 GTCATGCAAGCAGCTGGAAAA 60.000 47.619 17.12 0.00 45.94 2.29
5062 5957 7.598869 GGCACTACATCATTTCTATTGACGATA 59.401 37.037 0.00 0.00 0.00 2.92
5140 6035 3.435671 GGTTTCCCACTTCAACTATCGTG 59.564 47.826 0.00 0.00 0.00 4.35
5142 6037 2.671396 CGGTTTCCCACTTCAACTATCG 59.329 50.000 0.00 0.00 0.00 2.92
5149 6044 1.210967 ACTTCACGGTTTCCCACTTCA 59.789 47.619 0.00 0.00 0.00 3.02
5150 6045 1.963172 ACTTCACGGTTTCCCACTTC 58.037 50.000 0.00 0.00 0.00 3.01
5182 6077 8.986477 ATATGTTTGACTAGGCAAAACAATTC 57.014 30.769 25.23 12.20 39.26 2.17
5223 6118 2.092429 TCACCTGCCATATTTGACTCCC 60.092 50.000 0.00 0.00 0.00 4.30
5264 6159 5.025190 TGTTGAATTTGTTCACGAAGTTCG 58.975 37.500 23.24 23.24 41.61 3.95
5463 6358 8.015658 GGCAAATAGTTCAGTAAGTAACAACAG 58.984 37.037 0.00 0.00 0.00 3.16
5497 6392 1.471684 GTCTCAGCCTGGCAAATTCAG 59.528 52.381 22.65 6.81 0.00 3.02
5528 6423 2.095617 TCGCAGCACAATTGACATCTTG 60.096 45.455 13.59 0.00 0.00 3.02
5544 6439 3.566523 AGAGTAGAACGTTTCTTCGCAG 58.433 45.455 0.46 0.00 41.14 5.18
5597 6492 4.922206 TGTTTTGCAGGATCAATAGTCCT 58.078 39.130 0.00 0.00 46.92 3.85
5608 6503 2.851263 ACCGAGTATGTTTTGCAGGA 57.149 45.000 0.00 0.00 0.00 3.86
5758 6653 3.198635 TCAGAGGTGATTTGATGTCCTCC 59.801 47.826 0.00 0.00 43.80 4.30
5924 6819 1.064758 ACCTTGCTCACTTGTGTTGGA 60.065 47.619 0.46 0.00 0.00 3.53
5949 6844 0.838122 CAGGGTGACAACCTCCTCCT 60.838 60.000 9.81 0.00 46.70 3.69
6240 7146 0.737219 GCTGATCCTGTTGATGGCAC 59.263 55.000 0.00 0.00 32.41 5.01
6451 7442 2.032117 TGCATCACACACGATGAACAAC 60.032 45.455 5.13 0.00 44.67 3.32
6461 7452 5.122869 AGACAGTATGAAATGCATCACACAC 59.877 40.000 0.00 2.96 39.69 3.82
6540 7531 9.740710 ACAAAGCTTCTAAATAGGTATTCAACT 57.259 29.630 0.00 0.00 0.00 3.16
6650 7683 7.542534 AATTAATTGCATGCAAATGTAGGTG 57.457 32.000 34.84 0.00 39.55 4.00
6651 7684 8.477256 ACTAATTAATTGCATGCAAATGTAGGT 58.523 29.630 34.84 23.20 39.55 3.08
6652 7685 8.876275 ACTAATTAATTGCATGCAAATGTAGG 57.124 30.769 34.84 22.64 39.55 3.18
6699 7732 8.721019 AACACTTTCCATAAATTAATGCATGG 57.279 30.769 17.10 17.10 39.48 3.66
6739 7772 5.014202 GTCCATTAGGAGTAGAGATCCTCC 58.986 50.000 7.47 7.47 44.05 4.30
6747 7780 4.960469 ACCAATTCGTCCATTAGGAGTAGA 59.040 41.667 0.00 0.00 46.92 2.59
6748 7781 5.277857 ACCAATTCGTCCATTAGGAGTAG 57.722 43.478 0.00 0.00 46.92 2.57
6749 7782 5.188163 TCAACCAATTCGTCCATTAGGAGTA 59.812 40.000 0.00 0.00 46.92 2.59
6750 7783 4.019681 TCAACCAATTCGTCCATTAGGAGT 60.020 41.667 0.00 0.00 46.92 3.85
6751 7784 4.513442 TCAACCAATTCGTCCATTAGGAG 58.487 43.478 0.00 0.00 46.92 3.69
6752 7785 4.561500 TCAACCAATTCGTCCATTAGGA 57.438 40.909 0.00 0.00 43.21 2.94
6753 7786 5.835113 ATTCAACCAATTCGTCCATTAGG 57.165 39.130 0.00 0.00 0.00 2.69
6754 7787 7.254795 GGACTATTCAACCAATTCGTCCATTAG 60.255 40.741 0.00 0.00 40.39 1.73
6755 7788 6.540914 GGACTATTCAACCAATTCGTCCATTA 59.459 38.462 0.00 0.00 40.39 1.90
6756 7789 5.357032 GGACTATTCAACCAATTCGTCCATT 59.643 40.000 0.00 0.00 40.39 3.16
6757 7790 4.881850 GGACTATTCAACCAATTCGTCCAT 59.118 41.667 0.00 0.00 40.39 3.41
6758 7791 4.258543 GGACTATTCAACCAATTCGTCCA 58.741 43.478 0.00 0.00 40.39 4.02
6759 7792 3.626217 GGGACTATTCAACCAATTCGTCC 59.374 47.826 0.00 0.00 40.18 4.79
6760 7793 3.626217 GGGGACTATTCAACCAATTCGTC 59.374 47.826 0.00 0.00 0.00 4.20
6761 7794 3.617284 GGGGACTATTCAACCAATTCGT 58.383 45.455 0.00 0.00 0.00 3.85
6762 7795 2.949644 GGGGGACTATTCAACCAATTCG 59.050 50.000 0.00 0.00 0.00 3.34
6782 7815 0.757561 AAACCGGTTGAAAGTGGGGG 60.758 55.000 23.08 0.00 0.00 5.40
6783 7816 1.984066 TAAACCGGTTGAAAGTGGGG 58.016 50.000 23.08 0.00 0.00 4.96
6784 7817 4.594123 AAATAAACCGGTTGAAAGTGGG 57.406 40.909 23.08 0.00 0.00 4.61
6785 7818 5.593010 TGAAAATAAACCGGTTGAAAGTGG 58.407 37.500 23.08 0.00 0.00 4.00
6786 7819 6.019398 GGTTGAAAATAAACCGGTTGAAAGTG 60.019 38.462 23.08 0.00 37.90 3.16
6787 7820 6.044046 GGTTGAAAATAAACCGGTTGAAAGT 58.956 36.000 23.08 7.21 37.90 2.66
6788 7821 6.519353 GGTTGAAAATAAACCGGTTGAAAG 57.481 37.500 23.08 0.00 37.90 2.62
6797 7830 7.515528 CGAAGAAAAACCGGTTGAAAATAAACC 60.516 37.037 23.08 2.95 43.11 3.27
6798 7831 7.009448 ACGAAGAAAAACCGGTTGAAAATAAAC 59.991 33.333 23.08 6.56 0.00 2.01
6799 7832 7.034397 ACGAAGAAAAACCGGTTGAAAATAAA 58.966 30.769 23.08 0.00 0.00 1.40
6800 7833 6.562518 ACGAAGAAAAACCGGTTGAAAATAA 58.437 32.000 23.08 0.00 0.00 1.40
6801 7834 6.134040 ACGAAGAAAAACCGGTTGAAAATA 57.866 33.333 23.08 0.00 0.00 1.40
6802 7835 5.001237 ACGAAGAAAAACCGGTTGAAAAT 57.999 34.783 23.08 7.80 0.00 1.82
6803 7836 4.413969 GACGAAGAAAAACCGGTTGAAAA 58.586 39.130 23.08 0.00 0.00 2.29
6804 7837 3.181498 GGACGAAGAAAAACCGGTTGAAA 60.181 43.478 23.08 0.00 0.00 2.69
6805 7838 2.355444 GGACGAAGAAAAACCGGTTGAA 59.645 45.455 23.08 0.00 0.00 2.69
6806 7839 1.941975 GGACGAAGAAAAACCGGTTGA 59.058 47.619 23.08 0.00 0.00 3.18
6807 7840 1.002142 GGGACGAAGAAAAACCGGTTG 60.002 52.381 23.08 8.93 0.00 3.77
6808 7841 1.311859 GGGACGAAGAAAAACCGGTT 58.688 50.000 15.86 15.86 0.00 4.44
6809 7842 0.180878 TGGGACGAAGAAAAACCGGT 59.819 50.000 0.00 0.00 0.00 5.28
6810 7843 0.589708 GTGGGACGAAGAAAAACCGG 59.410 55.000 0.00 0.00 0.00 5.28
6811 7844 0.589708 GGTGGGACGAAGAAAAACCG 59.410 55.000 0.00 0.00 0.00 4.44
6812 7845 1.878088 GAGGTGGGACGAAGAAAAACC 59.122 52.381 0.00 0.00 0.00 3.27
6813 7846 1.878088 GGAGGTGGGACGAAGAAAAAC 59.122 52.381 0.00 0.00 0.00 2.43
6814 7847 1.202842 GGGAGGTGGGACGAAGAAAAA 60.203 52.381 0.00 0.00 0.00 1.94
6815 7848 0.399075 GGGAGGTGGGACGAAGAAAA 59.601 55.000 0.00 0.00 0.00 2.29
6816 7849 0.765135 TGGGAGGTGGGACGAAGAAA 60.765 55.000 0.00 0.00 0.00 2.52
6817 7850 1.152204 TGGGAGGTGGGACGAAGAA 60.152 57.895 0.00 0.00 0.00 2.52
6818 7851 1.911766 GTGGGAGGTGGGACGAAGA 60.912 63.158 0.00 0.00 0.00 2.87
6819 7852 2.663196 GTGGGAGGTGGGACGAAG 59.337 66.667 0.00 0.00 0.00 3.79
6820 7853 2.926242 GGTGGGAGGTGGGACGAA 60.926 66.667 0.00 0.00 0.00 3.85
6821 7854 4.242586 TGGTGGGAGGTGGGACGA 62.243 66.667 0.00 0.00 0.00 4.20
6822 7855 3.706373 CTGGTGGGAGGTGGGACG 61.706 72.222 0.00 0.00 0.00 4.79
6823 7856 4.035102 GCTGGTGGGAGGTGGGAC 62.035 72.222 0.00 0.00 0.00 4.46
6839 7872 3.820825 AAAAACCGGTGGGAGGGGC 62.821 63.158 8.52 0.00 36.97 5.80
6840 7873 1.605451 GAAAAACCGGTGGGAGGGG 60.605 63.158 8.52 0.00 36.97 4.79
6841 7874 0.608308 GAGAAAAACCGGTGGGAGGG 60.608 60.000 8.52 0.00 36.97 4.30
6842 7875 0.400594 AGAGAAAAACCGGTGGGAGG 59.599 55.000 8.52 0.00 36.97 4.30
6843 7876 2.271944 AAGAGAAAAACCGGTGGGAG 57.728 50.000 8.52 0.00 36.97 4.30
6844 7877 2.740506 AAAGAGAAAAACCGGTGGGA 57.259 45.000 8.52 0.00 36.97 4.37
6845 7878 2.956333 AGAAAAGAGAAAAACCGGTGGG 59.044 45.455 8.52 0.00 40.11 4.61
6846 7879 3.303791 CGAGAAAAGAGAAAAACCGGTGG 60.304 47.826 8.52 0.00 0.00 4.61
6847 7880 3.311596 ACGAGAAAAGAGAAAAACCGGTG 59.688 43.478 8.52 0.00 0.00 4.94
6848 7881 3.538591 ACGAGAAAAGAGAAAAACCGGT 58.461 40.909 0.00 0.00 0.00 5.28
6849 7882 3.808174 AGACGAGAAAAGAGAAAAACCGG 59.192 43.478 0.00 0.00 0.00 5.28
6850 7883 4.506654 TCAGACGAGAAAAGAGAAAAACCG 59.493 41.667 0.00 0.00 0.00 4.44
6851 7884 5.277393 GGTCAGACGAGAAAAGAGAAAAACC 60.277 44.000 0.00 0.00 0.00 3.27
6852 7885 5.556570 CGGTCAGACGAGAAAAGAGAAAAAC 60.557 44.000 0.00 0.00 35.47 2.43
6853 7886 4.506654 CGGTCAGACGAGAAAAGAGAAAAA 59.493 41.667 0.00 0.00 35.47 1.94
6854 7887 4.049186 CGGTCAGACGAGAAAAGAGAAAA 58.951 43.478 0.00 0.00 35.47 2.29
6855 7888 3.552273 CCGGTCAGACGAGAAAAGAGAAA 60.552 47.826 0.00 0.00 35.47 2.52
6856 7889 2.030185 CCGGTCAGACGAGAAAAGAGAA 60.030 50.000 0.00 0.00 35.47 2.87
6857 7890 1.540267 CCGGTCAGACGAGAAAAGAGA 59.460 52.381 0.00 0.00 35.47 3.10
6858 7891 1.983972 CCGGTCAGACGAGAAAAGAG 58.016 55.000 0.00 0.00 35.47 2.85
6859 7892 0.038526 GCCGGTCAGACGAGAAAAGA 60.039 55.000 1.90 0.00 35.47 2.52
6860 7893 0.319555 TGCCGGTCAGACGAGAAAAG 60.320 55.000 1.90 0.00 35.47 2.27
6861 7894 0.105224 TTGCCGGTCAGACGAGAAAA 59.895 50.000 1.90 0.00 35.47 2.29
6862 7895 0.320374 ATTGCCGGTCAGACGAGAAA 59.680 50.000 1.90 0.00 35.47 2.52
6863 7896 1.179152 TATTGCCGGTCAGACGAGAA 58.821 50.000 1.90 0.00 35.47 2.87
6864 7897 1.337071 GATATTGCCGGTCAGACGAGA 59.663 52.381 1.90 0.00 35.47 4.04
6865 7898 1.603172 GGATATTGCCGGTCAGACGAG 60.603 57.143 1.90 0.00 35.47 4.18
6866 7899 0.387929 GGATATTGCCGGTCAGACGA 59.612 55.000 1.90 0.00 35.47 4.20
6867 7900 0.104120 TGGATATTGCCGGTCAGACG 59.896 55.000 1.90 0.00 0.00 4.18
6868 7901 1.940613 GTTGGATATTGCCGGTCAGAC 59.059 52.381 1.90 0.00 0.00 3.51
6869 7902 1.472552 CGTTGGATATTGCCGGTCAGA 60.473 52.381 1.90 0.00 0.00 3.27
6870 7903 0.937304 CGTTGGATATTGCCGGTCAG 59.063 55.000 1.90 0.00 0.00 3.51
6871 7904 0.250793 ACGTTGGATATTGCCGGTCA 59.749 50.000 1.90 0.00 0.00 4.02
6872 7905 2.228138 TACGTTGGATATTGCCGGTC 57.772 50.000 1.90 0.00 0.00 4.79
6873 7906 2.922740 ATACGTTGGATATTGCCGGT 57.077 45.000 1.90 0.00 0.00 5.28
6874 7907 5.391523 CCATAAATACGTTGGATATTGCCGG 60.392 44.000 0.00 0.00 31.94 6.13
6875 7908 5.180492 ACCATAAATACGTTGGATATTGCCG 59.820 40.000 10.15 0.00 34.52 5.69
6876 7909 6.569179 ACCATAAATACGTTGGATATTGCC 57.431 37.500 10.15 0.00 34.52 4.52
6877 7910 9.769093 GATTACCATAAATACGTTGGATATTGC 57.231 33.333 10.15 0.00 34.52 3.56
6882 7915 9.567776 TGATTGATTACCATAAATACGTTGGAT 57.432 29.630 10.15 0.00 34.52 3.41
6883 7916 8.966069 TGATTGATTACCATAAATACGTTGGA 57.034 30.769 10.15 0.00 34.52 3.53
6896 7929 9.567776 ACGTGGATTAATTATGATTGATTACCA 57.432 29.630 0.00 0.00 0.00 3.25
6916 7949 9.923143 CTGGATTGATTTATTACTATACGTGGA 57.077 33.333 0.00 0.00 0.00 4.02
6917 7950 9.151471 CCTGGATTGATTTATTACTATACGTGG 57.849 37.037 0.00 0.00 0.00 4.94
6918 7951 9.706691 ACCTGGATTGATTTATTACTATACGTG 57.293 33.333 0.00 0.00 0.00 4.49
6928 7961 8.511126 ACCTTACCATACCTGGATTGATTTATT 58.489 33.333 0.00 0.00 46.37 1.40
6929 7962 8.057246 ACCTTACCATACCTGGATTGATTTAT 57.943 34.615 0.00 0.00 46.37 1.40
6930 7963 7.128109 TGACCTTACCATACCTGGATTGATTTA 59.872 37.037 0.00 0.00 46.37 1.40
6931 7964 6.069088 TGACCTTACCATACCTGGATTGATTT 60.069 38.462 0.00 0.00 46.37 2.17
6932 7965 5.431731 TGACCTTACCATACCTGGATTGATT 59.568 40.000 0.00 0.00 46.37 2.57
6933 7966 4.975147 TGACCTTACCATACCTGGATTGAT 59.025 41.667 0.00 0.00 46.37 2.57
6934 7967 4.367166 TGACCTTACCATACCTGGATTGA 58.633 43.478 0.00 0.00 46.37 2.57
6935 7968 4.771114 TGACCTTACCATACCTGGATTG 57.229 45.455 0.00 0.00 46.37 2.67
6936 7969 6.619852 AGTTATGACCTTACCATACCTGGATT 59.380 38.462 0.00 0.00 46.37 3.01
6937 7970 6.151049 AGTTATGACCTTACCATACCTGGAT 58.849 40.000 0.00 0.00 46.37 3.41
6938 7971 5.535029 AGTTATGACCTTACCATACCTGGA 58.465 41.667 0.00 0.00 46.37 3.86
6940 7973 6.463049 CCTGAGTTATGACCTTACCATACCTG 60.463 46.154 0.00 0.00 0.00 4.00
6941 7974 5.602978 CCTGAGTTATGACCTTACCATACCT 59.397 44.000 0.00 0.00 0.00 3.08
6942 7975 5.601313 TCCTGAGTTATGACCTTACCATACC 59.399 44.000 0.00 0.00 0.00 2.73
6943 7976 6.726490 TCCTGAGTTATGACCTTACCATAC 57.274 41.667 0.00 0.00 0.00 2.39
6944 7977 7.743116 TTTCCTGAGTTATGACCTTACCATA 57.257 36.000 0.00 0.00 0.00 2.74
6945 7978 6.636454 TTTCCTGAGTTATGACCTTACCAT 57.364 37.500 0.00 0.00 0.00 3.55
6946 7979 6.636454 ATTTCCTGAGTTATGACCTTACCA 57.364 37.500 0.00 0.00 0.00 3.25
6947 7980 7.939784 AAATTTCCTGAGTTATGACCTTACC 57.060 36.000 0.00 0.00 0.00 2.85
6948 7981 9.010029 TCAAAATTTCCTGAGTTATGACCTTAC 57.990 33.333 0.00 0.00 0.00 2.34
6949 7982 9.581289 TTCAAAATTTCCTGAGTTATGACCTTA 57.419 29.630 0.00 0.00 0.00 2.69
6950 7983 8.477419 TTCAAAATTTCCTGAGTTATGACCTT 57.523 30.769 0.00 0.00 0.00 3.50
6951 7984 8.655935 ATTCAAAATTTCCTGAGTTATGACCT 57.344 30.769 0.00 0.00 0.00 3.85
6996 8029 9.052365 TGATAGCCTTTGGGGTAATTTAAATTT 57.948 29.630 18.14 0.00 46.84 1.82
6997 8030 8.616799 TGATAGCCTTTGGGGTAATTTAAATT 57.383 30.769 17.18 17.18 46.84 1.82
6998 8031 8.616799 TTGATAGCCTTTGGGGTAATTTAAAT 57.383 30.769 0.00 0.00 46.84 1.40
6999 8032 8.616799 ATTGATAGCCTTTGGGGTAATTTAAA 57.383 30.769 0.00 0.00 46.84 1.52
7000 8033 7.289084 GGATTGATAGCCTTTGGGGTAATTTAA 59.711 37.037 0.00 0.00 46.84 1.52
7001 8034 6.780522 GGATTGATAGCCTTTGGGGTAATTTA 59.219 38.462 0.00 0.00 46.84 1.40
7002 8035 5.602561 GGATTGATAGCCTTTGGGGTAATTT 59.397 40.000 0.00 0.00 46.84 1.82
7003 8036 5.147767 GGATTGATAGCCTTTGGGGTAATT 58.852 41.667 0.00 0.00 46.84 1.40
7004 8037 4.169856 TGGATTGATAGCCTTTGGGGTAAT 59.830 41.667 0.00 0.00 46.84 1.89
7005 8038 3.529734 TGGATTGATAGCCTTTGGGGTAA 59.470 43.478 0.00 0.00 46.84 2.85
7007 8040 1.929494 TGGATTGATAGCCTTTGGGGT 59.071 47.619 0.00 0.00 46.15 4.95
7008 8041 2.590821 CTGGATTGATAGCCTTTGGGG 58.409 52.381 0.00 0.00 38.36 4.96
7009 8042 2.091665 ACCTGGATTGATAGCCTTTGGG 60.092 50.000 0.00 0.00 0.00 4.12
7010 8043 3.303351 ACCTGGATTGATAGCCTTTGG 57.697 47.619 0.00 0.00 0.00 3.28
7011 8044 4.763793 CCATACCTGGATTGATAGCCTTTG 59.236 45.833 0.00 0.00 46.37 2.77
7012 8045 4.416848 ACCATACCTGGATTGATAGCCTTT 59.583 41.667 0.00 0.00 46.37 3.11
7013 8046 3.983410 ACCATACCTGGATTGATAGCCTT 59.017 43.478 0.00 0.00 46.37 4.35
7014 8047 3.602608 ACCATACCTGGATTGATAGCCT 58.397 45.455 0.00 0.00 46.37 4.58
7015 8048 5.491982 CTTACCATACCTGGATTGATAGCC 58.508 45.833 0.00 0.00 46.37 3.93
7016 8049 5.491982 CCTTACCATACCTGGATTGATAGC 58.508 45.833 0.00 0.00 46.37 2.97
7017 8050 5.491982 GCCTTACCATACCTGGATTGATAG 58.508 45.833 0.00 0.00 46.37 2.08
7018 8051 4.288626 GGCCTTACCATACCTGGATTGATA 59.711 45.833 0.00 0.00 46.37 2.15
7019 8052 3.074538 GGCCTTACCATACCTGGATTGAT 59.925 47.826 0.00 0.00 46.37 2.57
7020 8053 2.441750 GGCCTTACCATACCTGGATTGA 59.558 50.000 0.00 0.00 46.37 2.57
7021 8054 2.174639 TGGCCTTACCATACCTGGATTG 59.825 50.000 3.32 0.00 46.36 2.67
7022 8055 2.498441 TGGCCTTACCATACCTGGATT 58.502 47.619 3.32 0.00 46.36 3.01
7023 8056 2.206322 TGGCCTTACCATACCTGGAT 57.794 50.000 3.32 0.00 46.36 3.41
7024 8057 3.742422 TGGCCTTACCATACCTGGA 57.258 52.632 3.32 0.00 46.36 3.86
7033 8066 2.994186 TTCCGAGTTATGGCCTTACC 57.006 50.000 3.32 0.00 39.84 2.85
7034 8067 6.128634 CGATATTTTCCGAGTTATGGCCTTAC 60.129 42.308 3.32 0.00 0.00 2.34
7035 8068 5.929992 CGATATTTTCCGAGTTATGGCCTTA 59.070 40.000 3.32 0.00 0.00 2.69
7036 8069 4.755123 CGATATTTTCCGAGTTATGGCCTT 59.245 41.667 3.32 0.00 0.00 4.35
7037 8070 4.039973 TCGATATTTTCCGAGTTATGGCCT 59.960 41.667 3.32 0.00 0.00 5.19
7038 8071 4.312443 TCGATATTTTCCGAGTTATGGCC 58.688 43.478 0.00 0.00 0.00 5.36
7039 8072 5.917541 TTCGATATTTTCCGAGTTATGGC 57.082 39.130 0.00 0.00 36.11 4.40
7040 8073 8.604035 CCATATTCGATATTTTCCGAGTTATGG 58.396 37.037 14.99 14.99 41.19 2.74
7041 8074 9.151471 ACCATATTCGATATTTTCCGAGTTATG 57.849 33.333 0.00 0.00 36.11 1.90
7044 8077 9.720769 ATTACCATATTCGATATTTTCCGAGTT 57.279 29.630 0.00 0.00 36.11 3.01
7095 8128 6.581171 ATTACTATACGTGGGTAGCCTTAC 57.419 41.667 13.11 1.68 30.81 2.34
7096 8129 8.704849 TTTATTACTATACGTGGGTAGCCTTA 57.295 34.615 13.11 1.36 30.81 2.69
7097 8130 7.601705 TTTATTACTATACGTGGGTAGCCTT 57.398 36.000 13.11 0.00 30.81 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.