Multiple sequence alignment - TraesCS5A01G090700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G090700 chr5A 100.000 3140 0 0 1 3140 123389933 123386794 0.000000e+00 5799.0
1 TraesCS5A01G090700 chr5A 93.145 671 45 1 2470 3140 423829221 423829890 0.000000e+00 983.0
2 TraesCS5A01G090700 chr5A 89.043 648 71 0 2486 3133 489905520 489904873 0.000000e+00 804.0
3 TraesCS5A01G090700 chr4A 98.381 1729 27 1 747 2474 542525829 542524101 0.000000e+00 3037.0
4 TraesCS5A01G090700 chr4A 98.322 1728 25 3 746 2473 537244872 537246595 0.000000e+00 3027.0
5 TraesCS5A01G090700 chr4A 97.314 1303 33 2 1171 2473 674434842 674433542 0.000000e+00 2211.0
6 TraesCS5A01G090700 chr4A 90.760 671 59 3 2471 3140 438230483 438229815 0.000000e+00 893.0
7 TraesCS5A01G090700 chr4A 100.000 40 0 0 730 769 537244883 537244922 1.210000e-09 75.0
8 TraesCS5A01G090700 chr6B 93.932 1747 105 1 730 2475 529901343 529899597 0.000000e+00 2638.0
9 TraesCS5A01G090700 chr6B 88.462 78 9 0 537 614 17084143 17084066 9.270000e-16 95.3
10 TraesCS5A01G090700 chr2B 99.022 1432 12 2 1042 2473 429457950 429459379 0.000000e+00 2566.0
11 TraesCS5A01G090700 chr5D 87.493 1735 195 14 742 2471 435969612 435967895 0.000000e+00 1982.0
12 TraesCS5A01G090700 chr5D 89.462 465 37 10 2 461 116026974 116026517 7.550000e-161 577.0
13 TraesCS5A01G090700 chr7B 96.953 1116 32 2 1363 2477 672391887 672390773 0.000000e+00 1871.0
14 TraesCS5A01G090700 chr7B 91.525 59 3 2 537 594 1700109 1700052 2.600000e-11 80.5
15 TraesCS5A01G090700 chr7B 97.059 34 0 1 564 596 106339358 106339325 4.370000e-04 56.5
16 TraesCS5A01G090700 chr1D 87.755 1617 164 16 862 2472 334454132 334455720 0.000000e+00 1858.0
17 TraesCS5A01G090700 chr1A 92.363 1244 92 3 1228 2470 516079601 516078360 0.000000e+00 1768.0
18 TraesCS5A01G090700 chr1A 90.233 645 62 1 2489 3133 244592327 244592970 0.000000e+00 841.0
19 TraesCS5A01G090700 chr4D 92.760 663 48 0 2471 3133 65085394 65086056 0.000000e+00 959.0
20 TraesCS5A01G090700 chr7D 91.692 662 55 0 2472 3133 72280549 72279888 0.000000e+00 918.0
21 TraesCS5A01G090700 chr7D 90.196 51 5 0 543 593 112168992 112169042 2.020000e-07 67.6
22 TraesCS5A01G090700 chr3B 90.896 670 60 1 2471 3140 207232800 207233468 0.000000e+00 898.0
23 TraesCS5A01G090700 chr3B 93.933 445 26 1 2030 2474 459779269 459778826 0.000000e+00 671.0
24 TraesCS5A01G090700 chr4B 89.701 670 68 1 2471 3140 622046614 622047282 0.000000e+00 854.0
25 TraesCS5A01G090700 chr4B 88.823 671 72 3 2471 3140 69092594 69091926 0.000000e+00 821.0
26 TraesCS5A01G090700 chr5B 88.689 557 35 18 1 547 127771415 127770877 0.000000e+00 654.0
27 TraesCS5A01G090700 chr1B 80.240 167 23 9 546 707 657468532 657468371 1.980000e-22 117.0
28 TraesCS5A01G090700 chrUn 91.429 70 5 1 539 608 77494014 77493946 9.270000e-16 95.3
29 TraesCS5A01G090700 chr3A 85.897 78 6 4 538 614 28568416 28568489 9.340000e-11 78.7
30 TraesCS5A01G090700 chr2A 84.722 72 7 4 538 608 232598035 232598103 5.620000e-08 69.4
31 TraesCS5A01G090700 chr3D 85.714 56 7 1 543 597 512604593 512604538 1.220000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G090700 chr5A 123386794 123389933 3139 True 5799 5799 100.000 1 3140 1 chr5A.!!$R1 3139
1 TraesCS5A01G090700 chr5A 423829221 423829890 669 False 983 983 93.145 2470 3140 1 chr5A.!!$F1 670
2 TraesCS5A01G090700 chr5A 489904873 489905520 647 True 804 804 89.043 2486 3133 1 chr5A.!!$R2 647
3 TraesCS5A01G090700 chr4A 542524101 542525829 1728 True 3037 3037 98.381 747 2474 1 chr4A.!!$R2 1727
4 TraesCS5A01G090700 chr4A 674433542 674434842 1300 True 2211 2211 97.314 1171 2473 1 chr4A.!!$R3 1302
5 TraesCS5A01G090700 chr4A 537244872 537246595 1723 False 1551 3027 99.161 730 2473 2 chr4A.!!$F1 1743
6 TraesCS5A01G090700 chr4A 438229815 438230483 668 True 893 893 90.760 2471 3140 1 chr4A.!!$R1 669
7 TraesCS5A01G090700 chr6B 529899597 529901343 1746 True 2638 2638 93.932 730 2475 1 chr6B.!!$R2 1745
8 TraesCS5A01G090700 chr2B 429457950 429459379 1429 False 2566 2566 99.022 1042 2473 1 chr2B.!!$F1 1431
9 TraesCS5A01G090700 chr5D 435967895 435969612 1717 True 1982 1982 87.493 742 2471 1 chr5D.!!$R2 1729
10 TraesCS5A01G090700 chr7B 672390773 672391887 1114 True 1871 1871 96.953 1363 2477 1 chr7B.!!$R3 1114
11 TraesCS5A01G090700 chr1D 334454132 334455720 1588 False 1858 1858 87.755 862 2472 1 chr1D.!!$F1 1610
12 TraesCS5A01G090700 chr1A 516078360 516079601 1241 True 1768 1768 92.363 1228 2470 1 chr1A.!!$R1 1242
13 TraesCS5A01G090700 chr1A 244592327 244592970 643 False 841 841 90.233 2489 3133 1 chr1A.!!$F1 644
14 TraesCS5A01G090700 chr4D 65085394 65086056 662 False 959 959 92.760 2471 3133 1 chr4D.!!$F1 662
15 TraesCS5A01G090700 chr7D 72279888 72280549 661 True 918 918 91.692 2472 3133 1 chr7D.!!$R1 661
16 TraesCS5A01G090700 chr3B 207232800 207233468 668 False 898 898 90.896 2471 3140 1 chr3B.!!$F1 669
17 TraesCS5A01G090700 chr4B 622046614 622047282 668 False 854 854 89.701 2471 3140 1 chr4B.!!$F1 669
18 TraesCS5A01G090700 chr4B 69091926 69092594 668 True 821 821 88.823 2471 3140 1 chr4B.!!$R1 669
19 TraesCS5A01G090700 chr5B 127770877 127771415 538 True 654 654 88.689 1 547 1 chr5B.!!$R1 546

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
116 117 0.034186 CCAGCCAGGCAAGTATGGAA 60.034 55.0 15.8 0.0 39.02 3.53 F
254 255 0.035630 GCCTCACAGTTGCTCCAGAT 60.036 55.0 0.0 0.0 0.00 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1117 1124 2.370281 AGACATCTGCAACACCTACG 57.630 50.000 0.0 0.0 0.0 3.51 R
2277 2474 6.156256 TCCCAACATACTACAAACATAGCTCT 59.844 38.462 0.0 0.0 0.0 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.388499 TCCTTGCGTCGGGCTTCC 62.388 66.667 0.00 0.00 44.05 3.46
18 19 4.394712 CCTTGCGTCGGGCTTCCT 62.395 66.667 0.00 0.00 44.05 3.36
19 20 2.815647 CTTGCGTCGGGCTTCCTC 60.816 66.667 0.00 0.00 44.05 3.71
20 21 4.735132 TTGCGTCGGGCTTCCTCG 62.735 66.667 0.00 0.00 44.05 4.63
29 30 4.475135 GCTTCCTCGGGGCAGGTC 62.475 72.222 2.27 0.00 34.76 3.85
30 31 2.685380 CTTCCTCGGGGCAGGTCT 60.685 66.667 0.00 0.00 34.76 3.85
31 32 2.203938 TTCCTCGGGGCAGGTCTT 60.204 61.111 0.00 0.00 34.76 3.01
32 33 2.527951 CTTCCTCGGGGCAGGTCTTG 62.528 65.000 0.00 0.00 34.76 3.02
40 41 3.512516 GCAGGTCTTGCGGATGGC 61.513 66.667 0.00 0.00 44.09 4.40
41 42 2.825836 CAGGTCTTGCGGATGGCC 60.826 66.667 5.23 5.23 42.61 5.36
42 43 3.011517 AGGTCTTGCGGATGGCCT 61.012 61.111 10.31 10.31 42.61 5.19
43 44 2.514824 GGTCTTGCGGATGGCCTC 60.515 66.667 3.32 0.00 42.61 4.70
44 45 2.268920 GTCTTGCGGATGGCCTCA 59.731 61.111 3.32 0.00 42.61 3.86
45 46 1.153086 GTCTTGCGGATGGCCTCAT 60.153 57.895 3.32 0.00 42.61 2.90
46 47 1.146930 TCTTGCGGATGGCCTCATC 59.853 57.895 3.32 0.00 46.78 2.92
58 59 3.136750 CTCATCGGAGGGCCTGAG 58.863 66.667 12.95 8.26 37.51 3.35
59 60 2.444706 TCATCGGAGGGCCTGAGG 60.445 66.667 12.95 4.69 0.00 3.86
60 61 2.444706 CATCGGAGGGCCTGAGGA 60.445 66.667 12.95 5.35 0.00 3.71
61 62 2.066393 CATCGGAGGGCCTGAGGAA 61.066 63.158 12.95 0.00 0.00 3.36
62 63 1.306997 ATCGGAGGGCCTGAGGAAA 60.307 57.895 12.95 0.00 0.00 3.13
63 64 1.341156 ATCGGAGGGCCTGAGGAAAG 61.341 60.000 12.95 0.00 0.00 2.62
64 65 1.990060 CGGAGGGCCTGAGGAAAGA 60.990 63.158 12.95 0.00 0.00 2.52
65 66 1.911471 GGAGGGCCTGAGGAAAGAG 59.089 63.158 12.95 0.00 0.00 2.85
66 67 1.631071 GGAGGGCCTGAGGAAAGAGG 61.631 65.000 12.95 0.00 0.00 3.69
70 71 4.633769 CCTGAGGAAAGAGGCAGC 57.366 61.111 0.00 0.00 0.00 5.25
71 72 1.449246 CCTGAGGAAAGAGGCAGCG 60.449 63.158 0.00 0.00 0.00 5.18
72 73 2.046892 TGAGGAAAGAGGCAGCGC 60.047 61.111 0.00 0.00 0.00 5.92
73 74 3.191539 GAGGAAAGAGGCAGCGCG 61.192 66.667 0.00 0.00 0.00 6.86
74 75 3.649277 GAGGAAAGAGGCAGCGCGA 62.649 63.158 12.10 0.00 0.00 5.87
75 76 3.491652 GGAAAGAGGCAGCGCGAC 61.492 66.667 12.10 0.04 0.00 5.19
76 77 3.491652 GAAAGAGGCAGCGCGACC 61.492 66.667 12.10 13.22 0.00 4.79
114 115 4.247781 CCAGCCAGGCAAGTATGG 57.752 61.111 15.80 8.38 39.73 2.74
115 116 1.609239 CCAGCCAGGCAAGTATGGA 59.391 57.895 15.80 0.00 39.02 3.41
116 117 0.034186 CCAGCCAGGCAAGTATGGAA 60.034 55.000 15.80 0.00 39.02 3.53
117 118 1.410648 CCAGCCAGGCAAGTATGGAAT 60.411 52.381 15.80 0.00 39.02 3.01
118 119 1.679680 CAGCCAGGCAAGTATGGAATG 59.320 52.381 15.80 0.00 39.02 2.67
119 120 1.035139 GCCAGGCAAGTATGGAATGG 58.965 55.000 6.55 0.00 39.02 3.16
120 121 1.686115 GCCAGGCAAGTATGGAATGGT 60.686 52.381 6.55 0.00 39.02 3.55
121 122 2.026641 CCAGGCAAGTATGGAATGGTG 58.973 52.381 0.00 0.00 39.02 4.17
122 123 2.026641 CAGGCAAGTATGGAATGGTGG 58.973 52.381 0.00 0.00 0.00 4.61
123 124 1.063717 AGGCAAGTATGGAATGGTGGG 60.064 52.381 0.00 0.00 0.00 4.61
124 125 1.064017 GGCAAGTATGGAATGGTGGGA 60.064 52.381 0.00 0.00 0.00 4.37
125 126 2.301346 GCAAGTATGGAATGGTGGGAG 58.699 52.381 0.00 0.00 0.00 4.30
126 127 2.092429 GCAAGTATGGAATGGTGGGAGA 60.092 50.000 0.00 0.00 0.00 3.71
127 128 3.813443 CAAGTATGGAATGGTGGGAGAG 58.187 50.000 0.00 0.00 0.00 3.20
128 129 2.412591 AGTATGGAATGGTGGGAGAGG 58.587 52.381 0.00 0.00 0.00 3.69
129 130 1.140312 TATGGAATGGTGGGAGAGGC 58.860 55.000 0.00 0.00 0.00 4.70
130 131 0.625683 ATGGAATGGTGGGAGAGGCT 60.626 55.000 0.00 0.00 0.00 4.58
131 132 1.225704 GGAATGGTGGGAGAGGCTG 59.774 63.158 0.00 0.00 0.00 4.85
132 133 1.452833 GAATGGTGGGAGAGGCTGC 60.453 63.158 0.00 0.00 0.00 5.25
133 134 1.919600 GAATGGTGGGAGAGGCTGCT 61.920 60.000 0.00 0.00 0.00 4.24
134 135 2.207501 AATGGTGGGAGAGGCTGCTG 62.208 60.000 0.00 0.00 0.00 4.41
135 136 3.005539 GGTGGGAGAGGCTGCTGA 61.006 66.667 0.00 0.00 0.00 4.26
136 137 2.583520 GTGGGAGAGGCTGCTGAG 59.416 66.667 0.00 0.00 0.00 3.35
137 138 2.686470 TGGGAGAGGCTGCTGAGG 60.686 66.667 0.00 0.00 0.00 3.86
138 139 2.364842 GGGAGAGGCTGCTGAGGA 60.365 66.667 0.00 0.00 0.00 3.71
139 140 2.433994 GGGAGAGGCTGCTGAGGAG 61.434 68.421 0.00 0.00 0.00 3.69
140 141 2.433994 GGAGAGGCTGCTGAGGAGG 61.434 68.421 2.44 0.00 0.00 4.30
141 142 2.365370 AGAGGCTGCTGAGGAGGG 60.365 66.667 2.44 0.00 0.00 4.30
142 143 2.686835 GAGGCTGCTGAGGAGGGT 60.687 66.667 2.44 0.00 0.00 4.34
143 144 3.007920 AGGCTGCTGAGGAGGGTG 61.008 66.667 2.44 0.00 0.00 4.61
144 145 4.106925 GGCTGCTGAGGAGGGTGG 62.107 72.222 2.44 0.00 0.00 4.61
145 146 4.792804 GCTGCTGAGGAGGGTGGC 62.793 72.222 2.44 0.00 0.00 5.01
146 147 4.463879 CTGCTGAGGAGGGTGGCG 62.464 72.222 0.00 0.00 0.00 5.69
148 149 3.075005 GCTGAGGAGGGTGGCGTA 61.075 66.667 0.00 0.00 0.00 4.42
149 150 2.893398 CTGAGGAGGGTGGCGTAC 59.107 66.667 0.00 0.00 0.00 3.67
150 151 1.682684 CTGAGGAGGGTGGCGTACT 60.683 63.158 0.00 0.00 0.00 2.73
151 152 1.229082 TGAGGAGGGTGGCGTACTT 60.229 57.895 0.00 0.00 0.00 2.24
152 153 1.218316 GAGGAGGGTGGCGTACTTG 59.782 63.158 0.00 0.00 0.00 3.16
153 154 2.240162 GAGGAGGGTGGCGTACTTGG 62.240 65.000 0.00 0.00 0.00 3.61
154 155 2.590114 GGAGGGTGGCGTACTTGGT 61.590 63.158 0.00 0.00 0.00 3.67
155 156 1.375523 GAGGGTGGCGTACTTGGTG 60.376 63.158 0.00 0.00 0.00 4.17
156 157 2.359478 GGGTGGCGTACTTGGTGG 60.359 66.667 0.00 0.00 0.00 4.61
157 158 3.053896 GGTGGCGTACTTGGTGGC 61.054 66.667 0.00 0.00 0.00 5.01
158 159 3.419759 GTGGCGTACTTGGTGGCG 61.420 66.667 0.00 0.00 0.00 5.69
159 160 4.690719 TGGCGTACTTGGTGGCGG 62.691 66.667 0.00 0.00 0.00 6.13
180 181 3.537874 CATCCCCGTCCCCGTCTC 61.538 72.222 0.00 0.00 0.00 3.36
181 182 4.855072 ATCCCCGTCCCCGTCTCC 62.855 72.222 0.00 0.00 0.00 3.71
186 187 4.753662 CGTCCCCGTCTCCCCAGA 62.754 72.222 0.00 0.00 0.00 3.86
187 188 2.760385 GTCCCCGTCTCCCCAGAG 60.760 72.222 0.00 0.00 41.93 3.35
188 189 4.779733 TCCCCGTCTCCCCAGAGC 62.780 72.222 0.00 0.00 40.22 4.09
197 198 4.521062 CCCCAGAGCGCCGAGAAG 62.521 72.222 2.29 0.00 0.00 2.85
219 220 2.499685 GCAGGTAGCGGTGGGTAG 59.500 66.667 0.00 0.00 0.00 3.18
220 221 2.056223 GCAGGTAGCGGTGGGTAGA 61.056 63.158 0.00 0.00 0.00 2.59
221 222 2.017559 GCAGGTAGCGGTGGGTAGAG 62.018 65.000 0.00 0.00 0.00 2.43
222 223 1.076192 AGGTAGCGGTGGGTAGAGG 60.076 63.158 0.00 0.00 0.00 3.69
223 224 2.794028 GGTAGCGGTGGGTAGAGGC 61.794 68.421 0.00 0.00 0.00 4.70
224 225 2.443390 TAGCGGTGGGTAGAGGCC 60.443 66.667 0.00 0.00 0.00 5.19
239 240 4.811364 GCCCAGAGCCCTTGCCTC 62.811 72.222 0.00 0.00 38.69 4.70
240 241 3.333219 CCCAGAGCCCTTGCCTCA 61.333 66.667 0.00 0.00 38.69 3.86
241 242 2.045536 CCAGAGCCCTTGCCTCAC 60.046 66.667 0.00 0.00 38.69 3.51
242 243 2.752358 CAGAGCCCTTGCCTCACA 59.248 61.111 0.00 0.00 38.69 3.58
243 244 1.376942 CAGAGCCCTTGCCTCACAG 60.377 63.158 0.00 0.00 38.69 3.66
244 245 1.845205 AGAGCCCTTGCCTCACAGT 60.845 57.895 0.00 0.00 38.69 3.55
245 246 1.073897 GAGCCCTTGCCTCACAGTT 59.926 57.895 0.00 0.00 38.69 3.16
246 247 1.228367 AGCCCTTGCCTCACAGTTG 60.228 57.895 0.00 0.00 38.69 3.16
247 248 2.924105 GCCCTTGCCTCACAGTTGC 61.924 63.158 0.00 0.00 0.00 4.17
248 249 1.228367 CCCTTGCCTCACAGTTGCT 60.228 57.895 0.00 0.00 0.00 3.91
249 250 1.239968 CCCTTGCCTCACAGTTGCTC 61.240 60.000 0.00 0.00 0.00 4.26
250 251 1.239968 CCTTGCCTCACAGTTGCTCC 61.240 60.000 0.00 0.00 0.00 4.70
251 252 0.535780 CTTGCCTCACAGTTGCTCCA 60.536 55.000 0.00 0.00 0.00 3.86
252 253 0.535780 TTGCCTCACAGTTGCTCCAG 60.536 55.000 0.00 0.00 0.00 3.86
253 254 1.372683 GCCTCACAGTTGCTCCAGA 59.627 57.895 0.00 0.00 0.00 3.86
254 255 0.035630 GCCTCACAGTTGCTCCAGAT 60.036 55.000 0.00 0.00 0.00 2.90
255 256 1.735386 CCTCACAGTTGCTCCAGATG 58.265 55.000 0.00 0.00 0.00 2.90
256 257 1.085091 CTCACAGTTGCTCCAGATGC 58.915 55.000 0.00 0.00 0.00 3.91
257 258 0.671472 TCACAGTTGCTCCAGATGCG 60.671 55.000 0.00 0.00 0.00 4.73
258 259 2.037136 ACAGTTGCTCCAGATGCGC 61.037 57.895 0.00 0.00 0.00 6.09
259 260 2.437359 AGTTGCTCCAGATGCGCC 60.437 61.111 4.18 0.00 0.00 6.53
260 261 3.869272 GTTGCTCCAGATGCGCCG 61.869 66.667 4.18 0.00 0.00 6.46
268 269 4.880537 AGATGCGCCGCCTCGAAG 62.881 66.667 6.63 0.00 0.00 3.79
269 270 4.873129 GATGCGCCGCCTCGAAGA 62.873 66.667 6.63 0.00 0.00 2.87
270 271 4.451150 ATGCGCCGCCTCGAAGAA 62.451 61.111 6.63 0.00 34.09 2.52
273 274 3.181967 CGCCGCCTCGAAGAACAG 61.182 66.667 0.00 0.00 34.09 3.16
274 275 3.491652 GCCGCCTCGAAGAACAGC 61.492 66.667 0.00 0.00 34.09 4.40
275 276 2.815647 CCGCCTCGAAGAACAGCC 60.816 66.667 0.00 0.00 34.09 4.85
276 277 2.815647 CGCCTCGAAGAACAGCCC 60.816 66.667 0.00 0.00 34.09 5.19
277 278 2.436824 GCCTCGAAGAACAGCCCC 60.437 66.667 0.00 0.00 34.09 5.80
278 279 2.125512 CCTCGAAGAACAGCCCCG 60.126 66.667 0.00 0.00 34.09 5.73
279 280 2.815647 CTCGAAGAACAGCCCCGC 60.816 66.667 0.00 0.00 34.09 6.13
280 281 4.388499 TCGAAGAACAGCCCCGCC 62.388 66.667 0.00 0.00 0.00 6.13
281 282 4.394712 CGAAGAACAGCCCCGCCT 62.395 66.667 0.00 0.00 0.00 5.52
282 283 2.436824 GAAGAACAGCCCCGCCTC 60.437 66.667 0.00 0.00 0.00 4.70
283 284 3.978571 GAAGAACAGCCCCGCCTCC 62.979 68.421 0.00 0.00 0.00 4.30
285 286 4.115199 GAACAGCCCCGCCTCCAT 62.115 66.667 0.00 0.00 0.00 3.41
286 287 4.115199 AACAGCCCCGCCTCCATC 62.115 66.667 0.00 0.00 0.00 3.51
288 289 4.247380 CAGCCCCGCCTCCATCTC 62.247 72.222 0.00 0.00 0.00 2.75
291 292 3.554342 CCCCGCCTCCATCTCCAG 61.554 72.222 0.00 0.00 0.00 3.86
292 293 4.247380 CCCGCCTCCATCTCCAGC 62.247 72.222 0.00 0.00 0.00 4.85
293 294 4.247380 CCGCCTCCATCTCCAGCC 62.247 72.222 0.00 0.00 0.00 4.85
294 295 3.160047 CGCCTCCATCTCCAGCCT 61.160 66.667 0.00 0.00 0.00 4.58
295 296 2.509916 GCCTCCATCTCCAGCCTG 59.490 66.667 0.00 0.00 0.00 4.85
296 297 2.068821 GCCTCCATCTCCAGCCTGA 61.069 63.158 0.00 0.00 0.00 3.86
297 298 2.042404 GCCTCCATCTCCAGCCTGAG 62.042 65.000 0.00 0.00 0.00 3.35
298 299 0.690411 CCTCCATCTCCAGCCTGAGT 60.690 60.000 0.00 0.00 33.93 3.41
299 300 1.202330 CTCCATCTCCAGCCTGAGTT 58.798 55.000 0.00 0.00 33.93 3.01
300 301 0.907486 TCCATCTCCAGCCTGAGTTG 59.093 55.000 0.00 2.90 33.68 3.16
301 302 0.107312 CCATCTCCAGCCTGAGTTGG 60.107 60.000 13.06 13.06 45.37 3.77
305 306 3.488423 CCAGCCTGAGTTGGAGGT 58.512 61.111 0.00 0.00 46.89 3.85
306 307 1.002868 CCAGCCTGAGTTGGAGGTG 60.003 63.158 0.00 0.00 46.89 4.00
307 308 1.483595 CCAGCCTGAGTTGGAGGTGA 61.484 60.000 0.00 0.00 46.89 4.02
308 309 0.617413 CAGCCTGAGTTGGAGGTGAT 59.383 55.000 0.00 0.00 32.60 3.06
309 310 0.908198 AGCCTGAGTTGGAGGTGATC 59.092 55.000 0.00 0.00 32.60 2.92
310 311 0.460987 GCCTGAGTTGGAGGTGATCG 60.461 60.000 0.00 0.00 32.60 3.69
311 312 0.176680 CCTGAGTTGGAGGTGATCGG 59.823 60.000 0.00 0.00 0.00 4.18
312 313 1.186200 CTGAGTTGGAGGTGATCGGA 58.814 55.000 0.00 0.00 0.00 4.55
313 314 1.550524 CTGAGTTGGAGGTGATCGGAA 59.449 52.381 0.00 0.00 0.00 4.30
314 315 2.169352 CTGAGTTGGAGGTGATCGGAAT 59.831 50.000 0.00 0.00 0.00 3.01
315 316 3.371034 TGAGTTGGAGGTGATCGGAATA 58.629 45.455 0.00 0.00 0.00 1.75
316 317 3.772572 TGAGTTGGAGGTGATCGGAATAA 59.227 43.478 0.00 0.00 0.00 1.40
317 318 4.141937 TGAGTTGGAGGTGATCGGAATAAG 60.142 45.833 0.00 0.00 0.00 1.73
318 319 3.775316 AGTTGGAGGTGATCGGAATAAGT 59.225 43.478 0.00 0.00 0.00 2.24
319 320 4.960469 AGTTGGAGGTGATCGGAATAAGTA 59.040 41.667 0.00 0.00 0.00 2.24
320 321 5.424252 AGTTGGAGGTGATCGGAATAAGTAA 59.576 40.000 0.00 0.00 0.00 2.24
321 322 5.531122 TGGAGGTGATCGGAATAAGTAAG 57.469 43.478 0.00 0.00 0.00 2.34
322 323 4.960469 TGGAGGTGATCGGAATAAGTAAGT 59.040 41.667 0.00 0.00 0.00 2.24
323 324 6.131264 TGGAGGTGATCGGAATAAGTAAGTA 58.869 40.000 0.00 0.00 0.00 2.24
324 325 6.040166 TGGAGGTGATCGGAATAAGTAAGTAC 59.960 42.308 0.00 0.00 0.00 2.73
325 326 6.402456 AGGTGATCGGAATAAGTAAGTACC 57.598 41.667 0.00 0.00 0.00 3.34
326 327 5.009410 AGGTGATCGGAATAAGTAAGTACCG 59.991 44.000 0.00 0.00 41.39 4.02
327 328 5.218139 GTGATCGGAATAAGTAAGTACCGG 58.782 45.833 0.00 0.00 40.59 5.28
328 329 5.009010 GTGATCGGAATAAGTAAGTACCGGA 59.991 44.000 9.46 0.00 40.59 5.14
329 330 5.240183 TGATCGGAATAAGTAAGTACCGGAG 59.760 44.000 9.46 0.00 40.59 4.63
330 331 4.526970 TCGGAATAAGTAAGTACCGGAGT 58.473 43.478 9.46 0.00 40.59 3.85
331 332 4.336433 TCGGAATAAGTAAGTACCGGAGTG 59.664 45.833 9.46 0.00 40.59 3.51
332 333 4.336433 CGGAATAAGTAAGTACCGGAGTGA 59.664 45.833 9.46 0.00 37.28 3.41
333 334 5.163622 CGGAATAAGTAAGTACCGGAGTGAA 60.164 44.000 9.46 0.00 37.28 3.18
334 335 6.460676 CGGAATAAGTAAGTACCGGAGTGAAT 60.461 42.308 9.46 0.00 37.28 2.57
335 336 6.922407 GGAATAAGTAAGTACCGGAGTGAATC 59.078 42.308 9.46 0.00 0.00 2.52
336 337 4.367386 AAGTAAGTACCGGAGTGAATCG 57.633 45.455 9.46 0.00 0.00 3.34
337 338 3.350833 AGTAAGTACCGGAGTGAATCGT 58.649 45.455 9.46 0.00 0.00 3.73
338 339 2.649331 AAGTACCGGAGTGAATCGTG 57.351 50.000 9.46 0.00 0.00 4.35
339 340 1.830279 AGTACCGGAGTGAATCGTGA 58.170 50.000 9.46 0.00 0.00 4.35
340 341 2.165167 AGTACCGGAGTGAATCGTGAA 58.835 47.619 9.46 0.00 0.00 3.18
341 342 2.758979 AGTACCGGAGTGAATCGTGAAT 59.241 45.455 9.46 0.00 0.00 2.57
342 343 2.295253 ACCGGAGTGAATCGTGAATC 57.705 50.000 9.46 0.00 0.00 2.52
343 344 1.548719 ACCGGAGTGAATCGTGAATCA 59.451 47.619 9.46 0.00 0.00 2.57
344 345 2.028476 ACCGGAGTGAATCGTGAATCAA 60.028 45.455 9.46 0.00 0.00 2.57
345 346 3.000041 CCGGAGTGAATCGTGAATCAAA 59.000 45.455 0.00 0.00 0.00 2.69
346 347 3.181520 CCGGAGTGAATCGTGAATCAAAC 60.182 47.826 0.00 0.00 0.00 2.93
347 348 3.431912 CGGAGTGAATCGTGAATCAAACA 59.568 43.478 0.00 0.00 0.00 2.83
348 349 4.434725 CGGAGTGAATCGTGAATCAAACAG 60.435 45.833 0.00 0.00 0.00 3.16
349 350 4.398247 GAGTGAATCGTGAATCAAACAGC 58.602 43.478 0.00 0.00 0.00 4.40
350 351 3.814842 AGTGAATCGTGAATCAAACAGCA 59.185 39.130 0.00 0.00 0.00 4.41
351 352 4.275689 AGTGAATCGTGAATCAAACAGCAA 59.724 37.500 0.00 0.00 0.00 3.91
352 353 4.975502 GTGAATCGTGAATCAAACAGCAAA 59.024 37.500 0.00 0.00 0.00 3.68
353 354 5.630680 GTGAATCGTGAATCAAACAGCAAAT 59.369 36.000 0.00 0.00 0.00 2.32
354 355 6.144402 GTGAATCGTGAATCAAACAGCAAATT 59.856 34.615 0.00 0.00 0.00 1.82
355 356 6.700960 TGAATCGTGAATCAAACAGCAAATTT 59.299 30.769 0.00 0.00 0.00 1.82
356 357 7.224362 TGAATCGTGAATCAAACAGCAAATTTT 59.776 29.630 0.00 0.00 0.00 1.82
357 358 6.271396 TCGTGAATCAAACAGCAAATTTTG 57.729 33.333 4.72 4.72 34.57 2.44
374 375 4.041026 GCAACATGCGTGCTTACG 57.959 55.556 13.36 0.00 31.71 3.18
375 376 1.206578 GCAACATGCGTGCTTACGT 59.793 52.632 13.36 0.00 31.71 3.57
376 377 1.059657 GCAACATGCGTGCTTACGTG 61.060 55.000 13.36 0.00 31.71 4.49
377 378 0.234625 CAACATGCGTGCTTACGTGT 59.765 50.000 5.64 0.00 35.26 4.49
378 379 0.234625 AACATGCGTGCTTACGTGTG 59.765 50.000 5.64 3.94 35.26 3.82
379 380 1.132436 CATGCGTGCTTACGTGTGG 59.868 57.895 0.00 0.00 35.26 4.17
380 381 2.032634 ATGCGTGCTTACGTGTGGG 61.033 57.895 0.00 0.00 35.26 4.61
381 382 4.084888 GCGTGCTTACGTGTGGGC 62.085 66.667 0.00 0.00 35.26 5.36
382 383 3.773630 CGTGCTTACGTGTGGGCG 61.774 66.667 0.00 0.00 37.94 6.13
383 384 3.419759 GTGCTTACGTGTGGGCGG 61.420 66.667 0.00 0.00 35.98 6.13
384 385 3.931247 TGCTTACGTGTGGGCGGT 61.931 61.111 0.00 0.00 35.98 5.68
385 386 3.419759 GCTTACGTGTGGGCGGTG 61.420 66.667 0.00 0.00 35.98 4.94
386 387 2.029964 CTTACGTGTGGGCGGTGT 59.970 61.111 0.00 0.00 35.98 4.16
387 388 2.280254 TTACGTGTGGGCGGTGTG 60.280 61.111 0.00 0.00 35.98 3.82
388 389 3.811118 TTACGTGTGGGCGGTGTGG 62.811 63.158 0.00 0.00 35.98 4.17
391 392 4.555709 GTGTGGGCGGTGTGGTCA 62.556 66.667 0.00 0.00 0.00 4.02
392 393 3.798511 TGTGGGCGGTGTGGTCAA 61.799 61.111 0.00 0.00 0.00 3.18
393 394 2.978010 GTGGGCGGTGTGGTCAAG 60.978 66.667 0.00 0.00 0.00 3.02
394 395 4.263572 TGGGCGGTGTGGTCAAGG 62.264 66.667 0.00 0.00 0.00 3.61
398 399 4.619227 CGGTGTGGTCAAGGCCGT 62.619 66.667 0.00 0.00 37.87 5.68
399 400 2.978010 GGTGTGGTCAAGGCCGTG 60.978 66.667 13.08 13.08 0.00 4.94
400 401 2.978010 GTGTGGTCAAGGCCGTGG 60.978 66.667 19.08 1.58 0.00 4.94
401 402 3.484806 TGTGGTCAAGGCCGTGGT 61.485 61.111 19.08 0.00 0.00 4.16
402 403 2.668550 GTGGTCAAGGCCGTGGTC 60.669 66.667 19.08 11.81 0.00 4.02
403 404 3.948719 TGGTCAAGGCCGTGGTCC 61.949 66.667 19.08 19.71 0.00 4.46
404 405 3.637273 GGTCAAGGCCGTGGTCCT 61.637 66.667 19.08 0.00 34.90 3.85
405 406 2.430367 GTCAAGGCCGTGGTCCTT 59.570 61.111 19.08 8.30 44.31 3.36
408 409 2.750350 AAGGCCGTGGTCCTTGAG 59.250 61.111 12.05 0.00 42.03 3.02
409 410 2.895424 AAGGCCGTGGTCCTTGAGG 61.895 63.158 12.05 0.00 42.03 3.86
410 411 3.319198 GGCCGTGGTCCTTGAGGA 61.319 66.667 0.00 0.00 43.08 3.71
411 412 2.266055 GCCGTGGTCCTTGAGGAG 59.734 66.667 0.00 0.00 46.49 3.69
412 413 2.283529 GCCGTGGTCCTTGAGGAGA 61.284 63.158 0.00 0.00 46.49 3.71
413 414 1.893786 CCGTGGTCCTTGAGGAGAG 59.106 63.158 0.00 0.00 46.49 3.20
414 415 1.216710 CGTGGTCCTTGAGGAGAGC 59.783 63.158 0.00 0.00 46.49 4.09
415 416 1.216710 GTGGTCCTTGAGGAGAGCG 59.783 63.158 0.00 0.00 46.49 5.03
416 417 1.228894 TGGTCCTTGAGGAGAGCGT 60.229 57.895 0.00 0.00 46.49 5.07
417 418 1.251527 TGGTCCTTGAGGAGAGCGTC 61.252 60.000 0.00 0.00 46.49 5.19
418 419 1.513622 GTCCTTGAGGAGAGCGTCC 59.486 63.158 0.00 0.00 46.49 4.79
447 448 0.831307 AGGTGGAGAATAACCTCGGC 59.169 55.000 0.00 0.00 43.52 5.54
448 449 0.529992 GGTGGAGAATAACCTCGGCG 60.530 60.000 0.00 0.00 34.08 6.46
449 450 0.529992 GTGGAGAATAACCTCGGCGG 60.530 60.000 7.21 0.00 39.35 6.13
450 451 1.069258 GGAGAATAACCTCGGCGGG 59.931 63.158 7.21 1.99 36.97 6.13
451 452 1.397390 GGAGAATAACCTCGGCGGGA 61.397 60.000 9.18 0.00 36.97 5.14
452 453 0.249363 GAGAATAACCTCGGCGGGAC 60.249 60.000 9.18 1.12 36.97 4.46
453 454 0.974010 AGAATAACCTCGGCGGGACA 60.974 55.000 9.18 1.84 36.97 4.02
454 455 0.808847 GAATAACCTCGGCGGGACAC 60.809 60.000 9.18 0.00 36.97 3.67
455 456 1.262640 AATAACCTCGGCGGGACACT 61.263 55.000 9.18 0.00 36.97 3.55
456 457 1.956629 ATAACCTCGGCGGGACACTG 61.957 60.000 9.18 0.00 36.97 3.66
465 466 2.125106 GGGACACTGCCCGTGATC 60.125 66.667 9.87 4.45 46.81 2.92
466 467 2.662596 GGACACTGCCCGTGATCA 59.337 61.111 9.87 0.00 46.81 2.92
467 468 1.741770 GGACACTGCCCGTGATCAC 60.742 63.158 16.21 16.21 46.81 3.06
477 478 2.813908 GTGATCACGACGCCCACC 60.814 66.667 10.69 0.00 0.00 4.61
478 479 4.077184 TGATCACGACGCCCACCC 62.077 66.667 0.00 0.00 0.00 4.61
479 480 4.077184 GATCACGACGCCCACCCA 62.077 66.667 0.00 0.00 0.00 4.51
480 481 3.385749 GATCACGACGCCCACCCAT 62.386 63.158 0.00 0.00 0.00 4.00
481 482 3.385749 ATCACGACGCCCACCCATC 62.386 63.158 0.00 0.00 0.00 3.51
488 489 4.176752 GCCCACCCATCCCGTCTC 62.177 72.222 0.00 0.00 0.00 3.36
489 490 3.480133 CCCACCCATCCCGTCTCC 61.480 72.222 0.00 0.00 0.00 3.71
490 491 3.849951 CCACCCATCCCGTCTCCG 61.850 72.222 0.00 0.00 0.00 4.63
491 492 3.075005 CACCCATCCCGTCTCCGT 61.075 66.667 0.00 0.00 0.00 4.69
492 493 2.758737 ACCCATCCCGTCTCCGTC 60.759 66.667 0.00 0.00 0.00 4.79
493 494 2.442272 CCCATCCCGTCTCCGTCT 60.442 66.667 0.00 0.00 0.00 4.18
494 495 2.786495 CCCATCCCGTCTCCGTCTG 61.786 68.421 0.00 0.00 0.00 3.51
495 496 2.105128 CATCCCGTCTCCGTCTGC 59.895 66.667 0.00 0.00 0.00 4.26
496 497 2.362503 ATCCCGTCTCCGTCTGCA 60.363 61.111 0.00 0.00 0.00 4.41
497 498 2.418910 ATCCCGTCTCCGTCTGCAG 61.419 63.158 7.63 7.63 0.00 4.41
498 499 4.135153 CCCGTCTCCGTCTGCAGG 62.135 72.222 15.13 0.00 0.00 4.85
499 500 4.803426 CCGTCTCCGTCTGCAGGC 62.803 72.222 15.13 12.04 0.00 4.85
500 501 4.056125 CGTCTCCGTCTGCAGGCA 62.056 66.667 20.11 0.00 0.00 4.75
501 502 2.433318 GTCTCCGTCTGCAGGCAC 60.433 66.667 20.11 7.33 0.00 5.01
502 503 4.056125 TCTCCGTCTGCAGGCACG 62.056 66.667 20.11 19.07 35.72 5.34
507 508 4.767255 GTCTGCAGGCACGGGAGG 62.767 72.222 14.88 0.00 42.73 4.30
509 510 4.463879 CTGCAGGCACGGGAGGAG 62.464 72.222 5.57 0.00 38.42 3.69
511 512 3.706373 GCAGGCACGGGAGGAGAA 61.706 66.667 0.00 0.00 0.00 2.87
512 513 2.581354 CAGGCACGGGAGGAGAAG 59.419 66.667 0.00 0.00 0.00 2.85
513 514 1.984570 CAGGCACGGGAGGAGAAGA 60.985 63.158 0.00 0.00 0.00 2.87
514 515 1.684049 AGGCACGGGAGGAGAAGAG 60.684 63.158 0.00 0.00 0.00 2.85
515 516 2.726351 GGCACGGGAGGAGAAGAGG 61.726 68.421 0.00 0.00 0.00 3.69
516 517 1.682684 GCACGGGAGGAGAAGAGGA 60.683 63.158 0.00 0.00 0.00 3.71
517 518 1.258445 GCACGGGAGGAGAAGAGGAA 61.258 60.000 0.00 0.00 0.00 3.36
518 519 0.820871 CACGGGAGGAGAAGAGGAAG 59.179 60.000 0.00 0.00 0.00 3.46
519 520 0.410270 ACGGGAGGAGAAGAGGAAGT 59.590 55.000 0.00 0.00 0.00 3.01
520 521 0.820871 CGGGAGGAGAAGAGGAAGTG 59.179 60.000 0.00 0.00 0.00 3.16
521 522 0.539518 GGGAGGAGAAGAGGAAGTGC 59.460 60.000 0.00 0.00 0.00 4.40
522 523 1.567357 GGAGGAGAAGAGGAAGTGCT 58.433 55.000 0.00 0.00 0.00 4.40
523 524 1.905894 GGAGGAGAAGAGGAAGTGCTT 59.094 52.381 0.00 0.00 0.00 3.91
524 525 2.304470 GGAGGAGAAGAGGAAGTGCTTT 59.696 50.000 0.00 0.00 0.00 3.51
525 526 3.244735 GGAGGAGAAGAGGAAGTGCTTTT 60.245 47.826 0.00 0.00 0.00 2.27
526 527 4.393834 GAGGAGAAGAGGAAGTGCTTTTT 58.606 43.478 0.00 0.00 0.00 1.94
548 549 6.713792 TTTCAACTCGGTTTTTCTTTTTGG 57.286 33.333 0.00 0.00 0.00 3.28
549 550 5.646577 TCAACTCGGTTTTTCTTTTTGGA 57.353 34.783 0.00 0.00 0.00 3.53
550 551 6.026947 TCAACTCGGTTTTTCTTTTTGGAA 57.973 33.333 0.00 0.00 0.00 3.53
551 552 5.865013 TCAACTCGGTTTTTCTTTTTGGAAC 59.135 36.000 0.00 0.00 0.00 3.62
552 553 5.394224 ACTCGGTTTTTCTTTTTGGAACA 57.606 34.783 0.00 0.00 0.00 3.18
553 554 5.972935 ACTCGGTTTTTCTTTTTGGAACAT 58.027 33.333 0.00 0.00 39.30 2.71
554 555 7.102847 ACTCGGTTTTTCTTTTTGGAACATA 57.897 32.000 0.00 0.00 39.30 2.29
555 556 7.200455 ACTCGGTTTTTCTTTTTGGAACATAG 58.800 34.615 0.00 0.00 39.30 2.23
556 557 7.067737 ACTCGGTTTTTCTTTTTGGAACATAGA 59.932 33.333 0.00 0.00 39.30 1.98
557 558 7.197703 TCGGTTTTTCTTTTTGGAACATAGAC 58.802 34.615 0.00 0.00 39.30 2.59
558 559 6.141685 CGGTTTTTCTTTTTGGAACATAGACG 59.858 38.462 0.00 0.00 39.30 4.18
559 560 6.074516 GGTTTTTCTTTTTGGAACATAGACGC 60.075 38.462 0.00 0.00 39.30 5.19
560 561 5.759506 TTTCTTTTTGGAACATAGACGCA 57.240 34.783 0.00 0.00 39.30 5.24
561 562 4.742438 TCTTTTTGGAACATAGACGCAC 57.258 40.909 0.00 0.00 39.30 5.34
562 563 3.185594 TCTTTTTGGAACATAGACGCACG 59.814 43.478 0.00 0.00 39.30 5.34
563 564 2.442212 TTTGGAACATAGACGCACGA 57.558 45.000 0.00 0.00 39.30 4.35
564 565 2.442212 TTGGAACATAGACGCACGAA 57.558 45.000 0.00 0.00 39.30 3.85
565 566 1.990799 TGGAACATAGACGCACGAAG 58.009 50.000 0.00 0.00 0.00 3.79
566 567 0.645868 GGAACATAGACGCACGAAGC 59.354 55.000 0.00 0.00 40.87 3.86
590 591 8.431020 GCGTCCGGCTTTATAAATTAATAAAG 57.569 34.615 0.00 10.57 45.84 1.85
603 604 6.588719 AATTAATAAAGCCACAAGACAGCA 57.411 33.333 0.00 0.00 0.00 4.41
604 605 6.780457 ATTAATAAAGCCACAAGACAGCAT 57.220 33.333 0.00 0.00 0.00 3.79
605 606 4.708726 AATAAAGCCACAAGACAGCATC 57.291 40.909 0.00 0.00 0.00 3.91
606 607 1.251251 AAAGCCACAAGACAGCATCC 58.749 50.000 0.00 0.00 0.00 3.51
607 608 0.111061 AAGCCACAAGACAGCATCCA 59.889 50.000 0.00 0.00 0.00 3.41
608 609 0.111061 AGCCACAAGACAGCATCCAA 59.889 50.000 0.00 0.00 0.00 3.53
609 610 0.242017 GCCACAAGACAGCATCCAAC 59.758 55.000 0.00 0.00 0.00 3.77
610 611 0.883833 CCACAAGACAGCATCCAACC 59.116 55.000 0.00 0.00 0.00 3.77
611 612 1.608055 CACAAGACAGCATCCAACCA 58.392 50.000 0.00 0.00 0.00 3.67
612 613 1.538512 CACAAGACAGCATCCAACCAG 59.461 52.381 0.00 0.00 0.00 4.00
613 614 1.171308 CAAGACAGCATCCAACCAGG 58.829 55.000 0.00 0.00 39.47 4.45
614 615 0.610232 AAGACAGCATCCAACCAGGC 60.610 55.000 0.00 0.00 37.29 4.85
615 616 1.303561 GACAGCATCCAACCAGGCA 60.304 57.895 0.00 0.00 37.29 4.75
616 617 0.682209 GACAGCATCCAACCAGGCAT 60.682 55.000 0.00 0.00 37.29 4.40
617 618 0.625316 ACAGCATCCAACCAGGCATA 59.375 50.000 0.00 0.00 37.29 3.14
618 619 1.005805 ACAGCATCCAACCAGGCATAA 59.994 47.619 0.00 0.00 37.29 1.90
619 620 2.313317 CAGCATCCAACCAGGCATAAT 58.687 47.619 0.00 0.00 37.29 1.28
620 621 2.295349 CAGCATCCAACCAGGCATAATC 59.705 50.000 0.00 0.00 37.29 1.75
621 622 1.615392 GCATCCAACCAGGCATAATCC 59.385 52.381 0.00 0.00 37.29 3.01
622 623 2.948115 CATCCAACCAGGCATAATCCA 58.052 47.619 0.00 0.00 37.29 3.41
623 624 2.435372 TCCAACCAGGCATAATCCAC 57.565 50.000 0.00 0.00 37.29 4.02
624 625 1.638070 TCCAACCAGGCATAATCCACA 59.362 47.619 0.00 0.00 37.29 4.17
625 626 2.244510 TCCAACCAGGCATAATCCACAT 59.755 45.455 0.00 0.00 37.29 3.21
626 627 2.624838 CCAACCAGGCATAATCCACATC 59.375 50.000 0.00 0.00 0.00 3.06
627 628 3.289836 CAACCAGGCATAATCCACATCA 58.710 45.455 0.00 0.00 0.00 3.07
628 629 3.668141 ACCAGGCATAATCCACATCAA 57.332 42.857 0.00 0.00 0.00 2.57
629 630 3.290710 ACCAGGCATAATCCACATCAAC 58.709 45.455 0.00 0.00 0.00 3.18
630 631 3.289836 CCAGGCATAATCCACATCAACA 58.710 45.455 0.00 0.00 0.00 3.33
631 632 3.893200 CCAGGCATAATCCACATCAACAT 59.107 43.478 0.00 0.00 0.00 2.71
632 633 5.072055 CCAGGCATAATCCACATCAACATA 58.928 41.667 0.00 0.00 0.00 2.29
633 634 5.535783 CCAGGCATAATCCACATCAACATAA 59.464 40.000 0.00 0.00 0.00 1.90
634 635 6.040729 CCAGGCATAATCCACATCAACATAAA 59.959 38.462 0.00 0.00 0.00 1.40
635 636 7.417683 CCAGGCATAATCCACATCAACATAAAA 60.418 37.037 0.00 0.00 0.00 1.52
636 637 7.436080 CAGGCATAATCCACATCAACATAAAAC 59.564 37.037 0.00 0.00 0.00 2.43
637 638 7.123997 AGGCATAATCCACATCAACATAAAACA 59.876 33.333 0.00 0.00 0.00 2.83
638 639 7.927629 GGCATAATCCACATCAACATAAAACAT 59.072 33.333 0.00 0.00 0.00 2.71
639 640 9.964303 GCATAATCCACATCAACATAAAACATA 57.036 29.630 0.00 0.00 0.00 2.29
648 649 9.075519 ACATCAACATAAAACATAATTTCAGCG 57.924 29.630 0.00 0.00 0.00 5.18
649 650 8.533965 CATCAACATAAAACATAATTTCAGCGG 58.466 33.333 0.00 0.00 0.00 5.52
650 651 7.032580 TCAACATAAAACATAATTTCAGCGGG 58.967 34.615 0.00 0.00 0.00 6.13
651 652 5.348164 ACATAAAACATAATTTCAGCGGGC 58.652 37.500 0.00 0.00 0.00 6.13
652 653 3.951775 AAAACATAATTTCAGCGGGCA 57.048 38.095 0.00 0.00 0.00 5.36
653 654 2.939460 AACATAATTTCAGCGGGCAC 57.061 45.000 0.00 0.00 0.00 5.01
654 655 0.732571 ACATAATTTCAGCGGGCACG 59.267 50.000 2.50 2.50 44.63 5.34
668 669 3.726517 CACGCAGTCCCGGCAAAG 61.727 66.667 0.00 0.00 41.61 2.77
669 670 4.250305 ACGCAGTCCCGGCAAAGT 62.250 61.111 0.00 0.00 29.74 2.66
670 671 2.047655 CGCAGTCCCGGCAAAGTA 60.048 61.111 0.00 0.00 0.00 2.24
671 672 2.100631 CGCAGTCCCGGCAAAGTAG 61.101 63.158 0.00 0.00 0.00 2.57
672 673 1.295423 GCAGTCCCGGCAAAGTAGA 59.705 57.895 0.00 0.00 0.00 2.59
673 674 0.321298 GCAGTCCCGGCAAAGTAGAA 60.321 55.000 0.00 0.00 0.00 2.10
674 675 1.880646 GCAGTCCCGGCAAAGTAGAAA 60.881 52.381 0.00 0.00 0.00 2.52
675 676 1.804748 CAGTCCCGGCAAAGTAGAAAC 59.195 52.381 0.00 0.00 0.00 2.78
676 677 1.697982 AGTCCCGGCAAAGTAGAAACT 59.302 47.619 0.00 0.00 37.65 2.66
677 678 2.901839 AGTCCCGGCAAAGTAGAAACTA 59.098 45.455 0.00 0.00 33.75 2.24
678 679 3.325716 AGTCCCGGCAAAGTAGAAACTAA 59.674 43.478 0.00 0.00 33.75 2.24
679 680 4.019591 AGTCCCGGCAAAGTAGAAACTAAT 60.020 41.667 0.00 0.00 33.75 1.73
680 681 5.188359 AGTCCCGGCAAAGTAGAAACTAATA 59.812 40.000 0.00 0.00 33.75 0.98
681 682 5.522824 GTCCCGGCAAAGTAGAAACTAATAG 59.477 44.000 0.00 0.00 33.75 1.73
682 683 5.188359 TCCCGGCAAAGTAGAAACTAATAGT 59.812 40.000 0.00 0.00 33.75 2.12
683 684 5.878669 CCCGGCAAAGTAGAAACTAATAGTT 59.121 40.000 0.00 0.00 40.80 2.24
684 685 6.036844 CCCGGCAAAGTAGAAACTAATAGTTC 59.963 42.308 6.09 0.98 37.47 3.01
685 686 6.592607 CCGGCAAAGTAGAAACTAATAGTTCA 59.407 38.462 6.09 0.00 37.47 3.18
686 687 7.412672 CCGGCAAAGTAGAAACTAATAGTTCAC 60.413 40.741 6.09 5.47 37.47 3.18
687 688 7.412672 CGGCAAAGTAGAAACTAATAGTTCACC 60.413 40.741 6.09 0.00 37.47 4.02
688 689 7.389607 GGCAAAGTAGAAACTAATAGTTCACCA 59.610 37.037 6.09 0.00 37.47 4.17
689 690 8.780249 GCAAAGTAGAAACTAATAGTTCACCAA 58.220 33.333 6.09 0.00 37.47 3.67
691 692 9.503399 AAAGTAGAAACTAATAGTTCACCAAGG 57.497 33.333 6.09 0.00 37.47 3.61
692 693 7.104290 AGTAGAAACTAATAGTTCACCAAGGC 58.896 38.462 6.09 0.00 37.47 4.35
693 694 4.935808 AGAAACTAATAGTTCACCAAGGCG 59.064 41.667 6.09 0.00 37.47 5.52
694 695 4.546829 AACTAATAGTTCACCAAGGCGA 57.453 40.909 0.00 0.00 31.77 5.54
695 696 3.858247 ACTAATAGTTCACCAAGGCGAC 58.142 45.455 0.00 0.00 0.00 5.19
696 697 1.722011 AATAGTTCACCAAGGCGACG 58.278 50.000 0.00 0.00 0.00 5.12
697 698 0.892755 ATAGTTCACCAAGGCGACGA 59.107 50.000 0.00 0.00 0.00 4.20
698 699 0.892755 TAGTTCACCAAGGCGACGAT 59.107 50.000 0.00 0.00 0.00 3.73
699 700 0.892755 AGTTCACCAAGGCGACGATA 59.107 50.000 0.00 0.00 0.00 2.92
700 701 1.135083 AGTTCACCAAGGCGACGATAG 60.135 52.381 0.00 0.00 46.19 2.08
701 702 1.135199 GTTCACCAAGGCGACGATAGA 60.135 52.381 0.00 0.00 41.38 1.98
702 703 1.179152 TCACCAAGGCGACGATAGAA 58.821 50.000 0.00 0.00 41.38 2.10
703 704 1.135199 TCACCAAGGCGACGATAGAAC 60.135 52.381 0.00 0.00 41.38 3.01
704 705 0.892755 ACCAAGGCGACGATAGAACA 59.107 50.000 0.00 0.00 41.38 3.18
705 706 1.480954 ACCAAGGCGACGATAGAACAT 59.519 47.619 0.00 0.00 41.38 2.71
706 707 2.691526 ACCAAGGCGACGATAGAACATA 59.308 45.455 0.00 0.00 41.38 2.29
707 708 3.131577 ACCAAGGCGACGATAGAACATAA 59.868 43.478 0.00 0.00 41.38 1.90
708 709 3.489785 CCAAGGCGACGATAGAACATAAC 59.510 47.826 0.00 0.00 41.38 1.89
709 710 4.360563 CAAGGCGACGATAGAACATAACT 58.639 43.478 0.00 0.00 41.38 2.24
710 711 5.506815 CCAAGGCGACGATAGAACATAACTA 60.507 44.000 0.00 0.00 41.38 2.24
711 712 5.105834 AGGCGACGATAGAACATAACTAC 57.894 43.478 0.00 0.00 41.38 2.73
712 713 3.904824 GGCGACGATAGAACATAACTACG 59.095 47.826 0.00 0.00 41.38 3.51
713 714 4.521943 GCGACGATAGAACATAACTACGT 58.478 43.478 0.00 0.00 41.38 3.57
714 715 5.333339 GGCGACGATAGAACATAACTACGTA 60.333 44.000 0.00 0.00 41.38 3.57
715 716 5.782684 GCGACGATAGAACATAACTACGTAG 59.217 44.000 20.97 20.97 41.38 3.51
716 717 6.346120 GCGACGATAGAACATAACTACGTAGA 60.346 42.308 28.74 8.07 41.38 2.59
717 718 7.621013 GCGACGATAGAACATAACTACGTAGAT 60.621 40.741 28.74 19.55 41.38 1.98
718 719 8.854312 CGACGATAGAACATAACTACGTAGATA 58.146 37.037 28.74 21.11 41.38 1.98
719 720 9.950858 GACGATAGAACATAACTACGTAGATAC 57.049 37.037 28.74 9.45 41.38 2.24
720 721 9.703892 ACGATAGAACATAACTACGTAGATACT 57.296 33.333 28.74 15.59 41.38 2.12
725 726 9.190858 AGAACATAACTACGTAGATACTAGACG 57.809 37.037 28.74 8.98 42.22 4.18
726 727 7.344910 ACATAACTACGTAGATACTAGACGC 57.655 40.000 28.74 0.00 40.19 5.19
727 728 6.925718 ACATAACTACGTAGATACTAGACGCA 59.074 38.462 28.74 0.00 40.19 5.24
728 729 7.439356 ACATAACTACGTAGATACTAGACGCAA 59.561 37.037 28.74 0.00 40.19 4.85
735 736 4.035278 AGATACTAGACGCAAAGCACTC 57.965 45.455 0.00 0.00 0.00 3.51
739 740 3.938112 GACGCAAAGCACTCGTCT 58.062 55.556 11.65 0.00 46.21 4.18
947 954 2.203294 GTTGGCCCCGTTGACACT 60.203 61.111 0.00 0.00 0.00 3.55
1117 1124 0.453390 CATTCCGGCTTGGCTCTTTC 59.547 55.000 0.00 0.00 37.80 2.62
1141 1148 3.290710 AGGTGTTGCAGATGTCTTGTTT 58.709 40.909 0.00 0.00 0.00 2.83
2277 2474 0.102663 TCGTGGTGTACAAGCGTCAA 59.897 50.000 0.00 0.00 0.00 3.18
2339 2536 0.460311 GGTGTACTCATGGGGTCTCG 59.540 60.000 0.00 0.00 0.00 4.04
2605 2803 8.902806 CCAAGCCTGTAAGAAAATATGACATTA 58.097 33.333 0.00 0.00 34.07 1.90
2714 2912 4.969196 CAGCGCCACACCACTCGT 62.969 66.667 2.29 0.00 0.00 4.18
2746 2944 2.223340 CCCTCTGTGCGATTAACAATGC 60.223 50.000 0.00 0.00 0.00 3.56
2774 2972 0.808755 CCGAGCTATTTTGCGGGTTT 59.191 50.000 1.46 0.00 40.08 3.27
2777 2975 2.476185 CGAGCTATTTTGCGGGTTTCAG 60.476 50.000 0.00 0.00 38.13 3.02
2827 3025 2.120232 CCACGCAAATCTAGCTAGACG 58.880 52.381 25.52 23.88 34.72 4.18
2930 3128 3.131396 CACATTATCCGAGGTTGGTAGC 58.869 50.000 0.00 0.00 0.00 3.58
2990 3188 1.075748 GGGAATGCCAGCCTTCCAT 60.076 57.895 22.82 0.00 40.83 3.41
2996 3194 2.761465 GCCAGCCTTCCATAGCCCT 61.761 63.158 0.00 0.00 0.00 5.19
3000 3198 0.327000 AGCCTTCCATAGCCCTCTGT 60.327 55.000 0.00 0.00 0.00 3.41
3001 3199 1.062121 AGCCTTCCATAGCCCTCTGTA 60.062 52.381 0.00 0.00 0.00 2.74
3029 3227 1.632965 GCCCATTCCCCTCCGTAAGT 61.633 60.000 0.00 0.00 0.00 2.24
3083 3281 3.782042 GCCGTAAGCTTCCAGTCG 58.218 61.111 0.00 1.69 38.99 4.18
3135 3333 2.164865 CTCGAGCTCAGCCACCAGTT 62.165 60.000 15.40 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 4.475135 GACCTGCCCCGAGGAAGC 62.475 72.222 0.00 0.00 37.52 3.86
13 14 2.294078 AAGACCTGCCCCGAGGAAG 61.294 63.158 0.00 0.00 38.82 3.46
14 15 2.203938 AAGACCTGCCCCGAGGAA 60.204 61.111 0.00 0.00 36.51 3.36
15 16 3.003173 CAAGACCTGCCCCGAGGA 61.003 66.667 0.00 0.00 36.51 3.71
16 17 4.785453 GCAAGACCTGCCCCGAGG 62.785 72.222 0.00 0.00 46.13 4.63
24 25 2.825836 GGCCATCCGCAAGACCTG 60.826 66.667 0.00 0.00 40.31 4.00
25 26 3.011517 AGGCCATCCGCAAGACCT 61.012 61.111 5.01 0.00 40.31 3.85
26 27 2.514824 GAGGCCATCCGCAAGACC 60.515 66.667 5.01 0.00 40.31 3.85
27 28 1.153086 ATGAGGCCATCCGCAAGAC 60.153 57.895 5.01 0.00 45.28 3.01
28 29 1.146930 GATGAGGCCATCCGCAAGA 59.853 57.895 5.01 0.00 45.28 3.02
29 30 2.249535 CGATGAGGCCATCCGCAAG 61.250 63.158 5.01 0.00 45.28 4.01
30 31 2.203056 CGATGAGGCCATCCGCAA 60.203 61.111 5.01 0.00 45.28 4.85
31 32 4.240103 CCGATGAGGCCATCCGCA 62.240 66.667 5.01 0.00 44.87 5.69
32 33 3.873026 CTCCGATGAGGCCATCCGC 62.873 68.421 5.01 0.00 44.87 5.54
33 34 2.341543 CTCCGATGAGGCCATCCG 59.658 66.667 5.01 2.33 44.87 4.18
41 42 2.506061 CCTCAGGCCCTCCGATGAG 61.506 68.421 9.86 9.86 35.52 2.90
42 43 2.444706 CCTCAGGCCCTCCGATGA 60.445 66.667 0.00 0.00 37.47 2.92
43 44 1.626356 TTTCCTCAGGCCCTCCGATG 61.626 60.000 0.00 0.00 37.47 3.84
44 45 1.306997 TTTCCTCAGGCCCTCCGAT 60.307 57.895 0.00 0.00 37.47 4.18
45 46 1.990060 CTTTCCTCAGGCCCTCCGA 60.990 63.158 0.00 0.00 37.47 4.55
46 47 1.965754 CTCTTTCCTCAGGCCCTCCG 61.966 65.000 0.00 0.00 37.47 4.63
47 48 1.631071 CCTCTTTCCTCAGGCCCTCC 61.631 65.000 0.00 0.00 0.00 4.30
48 49 1.911471 CCTCTTTCCTCAGGCCCTC 59.089 63.158 0.00 0.00 0.00 4.30
49 50 4.160818 CCTCTTTCCTCAGGCCCT 57.839 61.111 0.00 0.00 0.00 5.19
53 54 1.449246 CGCTGCCTCTTTCCTCAGG 60.449 63.158 0.00 0.00 0.00 3.86
54 55 2.105466 GCGCTGCCTCTTTCCTCAG 61.105 63.158 0.00 0.00 0.00 3.35
55 56 2.046892 GCGCTGCCTCTTTCCTCA 60.047 61.111 0.00 0.00 0.00 3.86
56 57 3.191539 CGCGCTGCCTCTTTCCTC 61.192 66.667 5.56 0.00 0.00 3.71
57 58 3.695606 TCGCGCTGCCTCTTTCCT 61.696 61.111 5.56 0.00 0.00 3.36
58 59 3.491652 GTCGCGCTGCCTCTTTCC 61.492 66.667 5.56 0.00 0.00 3.13
59 60 3.491652 GGTCGCGCTGCCTCTTTC 61.492 66.667 5.56 0.00 0.00 2.62
97 98 0.034186 TTCCATACTTGCCTGGCTGG 60.034 55.000 21.03 18.06 39.35 4.85
98 99 1.679680 CATTCCATACTTGCCTGGCTG 59.320 52.381 21.03 14.75 32.30 4.85
99 100 1.410648 CCATTCCATACTTGCCTGGCT 60.411 52.381 21.03 1.67 32.30 4.75
100 101 1.035139 CCATTCCATACTTGCCTGGC 58.965 55.000 12.87 12.87 32.30 4.85
101 102 2.026641 CACCATTCCATACTTGCCTGG 58.973 52.381 0.00 0.00 0.00 4.45
102 103 2.026641 CCACCATTCCATACTTGCCTG 58.973 52.381 0.00 0.00 0.00 4.85
103 104 1.063717 CCCACCATTCCATACTTGCCT 60.064 52.381 0.00 0.00 0.00 4.75
104 105 1.064017 TCCCACCATTCCATACTTGCC 60.064 52.381 0.00 0.00 0.00 4.52
105 106 2.092429 TCTCCCACCATTCCATACTTGC 60.092 50.000 0.00 0.00 0.00 4.01
106 107 3.434167 CCTCTCCCACCATTCCATACTTG 60.434 52.174 0.00 0.00 0.00 3.16
107 108 2.780010 CCTCTCCCACCATTCCATACTT 59.220 50.000 0.00 0.00 0.00 2.24
108 109 2.412591 CCTCTCCCACCATTCCATACT 58.587 52.381 0.00 0.00 0.00 2.12
109 110 1.202818 GCCTCTCCCACCATTCCATAC 60.203 57.143 0.00 0.00 0.00 2.39
110 111 1.140312 GCCTCTCCCACCATTCCATA 58.860 55.000 0.00 0.00 0.00 2.74
111 112 0.625683 AGCCTCTCCCACCATTCCAT 60.626 55.000 0.00 0.00 0.00 3.41
112 113 1.229951 AGCCTCTCCCACCATTCCA 60.230 57.895 0.00 0.00 0.00 3.53
113 114 1.225704 CAGCCTCTCCCACCATTCC 59.774 63.158 0.00 0.00 0.00 3.01
114 115 1.452833 GCAGCCTCTCCCACCATTC 60.453 63.158 0.00 0.00 0.00 2.67
115 116 1.927527 AGCAGCCTCTCCCACCATT 60.928 57.895 0.00 0.00 0.00 3.16
116 117 2.285969 AGCAGCCTCTCCCACCAT 60.286 61.111 0.00 0.00 0.00 3.55
117 118 3.324930 CAGCAGCCTCTCCCACCA 61.325 66.667 0.00 0.00 0.00 4.17
118 119 3.005539 TCAGCAGCCTCTCCCACC 61.006 66.667 0.00 0.00 0.00 4.61
119 120 2.583520 CTCAGCAGCCTCTCCCAC 59.416 66.667 0.00 0.00 0.00 4.61
120 121 2.686470 CCTCAGCAGCCTCTCCCA 60.686 66.667 0.00 0.00 0.00 4.37
121 122 2.364842 TCCTCAGCAGCCTCTCCC 60.365 66.667 0.00 0.00 0.00 4.30
122 123 2.433994 CCTCCTCAGCAGCCTCTCC 61.434 68.421 0.00 0.00 0.00 3.71
123 124 2.433994 CCCTCCTCAGCAGCCTCTC 61.434 68.421 0.00 0.00 0.00 3.20
124 125 2.365370 CCCTCCTCAGCAGCCTCT 60.365 66.667 0.00 0.00 0.00 3.69
125 126 2.686835 ACCCTCCTCAGCAGCCTC 60.687 66.667 0.00 0.00 0.00 4.70
126 127 3.007920 CACCCTCCTCAGCAGCCT 61.008 66.667 0.00 0.00 0.00 4.58
127 128 4.106925 CCACCCTCCTCAGCAGCC 62.107 72.222 0.00 0.00 0.00 4.85
128 129 4.792804 GCCACCCTCCTCAGCAGC 62.793 72.222 0.00 0.00 0.00 5.25
129 130 4.463879 CGCCACCCTCCTCAGCAG 62.464 72.222 0.00 0.00 0.00 4.24
130 131 3.897681 TACGCCACCCTCCTCAGCA 62.898 63.158 0.00 0.00 0.00 4.41
131 132 3.075005 TACGCCACCCTCCTCAGC 61.075 66.667 0.00 0.00 0.00 4.26
132 133 1.258445 AAGTACGCCACCCTCCTCAG 61.258 60.000 0.00 0.00 0.00 3.35
133 134 1.229082 AAGTACGCCACCCTCCTCA 60.229 57.895 0.00 0.00 0.00 3.86
134 135 1.218316 CAAGTACGCCACCCTCCTC 59.782 63.158 0.00 0.00 0.00 3.71
135 136 2.291043 CCAAGTACGCCACCCTCCT 61.291 63.158 0.00 0.00 0.00 3.69
136 137 2.267961 CCAAGTACGCCACCCTCC 59.732 66.667 0.00 0.00 0.00 4.30
137 138 1.375523 CACCAAGTACGCCACCCTC 60.376 63.158 0.00 0.00 0.00 4.30
138 139 2.747686 CACCAAGTACGCCACCCT 59.252 61.111 0.00 0.00 0.00 4.34
139 140 2.359478 CCACCAAGTACGCCACCC 60.359 66.667 0.00 0.00 0.00 4.61
140 141 3.053896 GCCACCAAGTACGCCACC 61.054 66.667 0.00 0.00 0.00 4.61
141 142 3.419759 CGCCACCAAGTACGCCAC 61.420 66.667 0.00 0.00 0.00 5.01
142 143 4.690719 CCGCCACCAAGTACGCCA 62.691 66.667 0.00 0.00 0.00 5.69
170 171 2.760385 CTCTGGGGAGACGGGGAC 60.760 72.222 0.00 0.00 41.86 4.46
171 172 4.779733 GCTCTGGGGAGACGGGGA 62.780 72.222 0.00 0.00 41.86 4.81
180 181 4.521062 CTTCTCGGCGCTCTGGGG 62.521 72.222 7.64 0.00 0.00 4.96
191 192 4.492160 TACCTGCGGCGCTTCTCG 62.492 66.667 33.26 16.76 42.12 4.04
192 193 2.583593 CTACCTGCGGCGCTTCTC 60.584 66.667 33.26 3.63 0.00 2.87
193 194 4.821589 GCTACCTGCGGCGCTTCT 62.822 66.667 33.26 16.46 0.00 2.85
202 203 2.017559 CTCTACCCACCGCTACCTGC 62.018 65.000 0.00 0.00 38.57 4.85
203 204 1.392710 CCTCTACCCACCGCTACCTG 61.393 65.000 0.00 0.00 0.00 4.00
204 205 1.076192 CCTCTACCCACCGCTACCT 60.076 63.158 0.00 0.00 0.00 3.08
205 206 2.794028 GCCTCTACCCACCGCTACC 61.794 68.421 0.00 0.00 0.00 3.18
206 207 2.794028 GGCCTCTACCCACCGCTAC 61.794 68.421 0.00 0.00 0.00 3.58
207 208 2.443390 GGCCTCTACCCACCGCTA 60.443 66.667 0.00 0.00 0.00 4.26
228 229 1.228367 CAACTGTGAGGCAAGGGCT 60.228 57.895 0.00 0.00 42.48 5.19
229 230 2.924105 GCAACTGTGAGGCAAGGGC 61.924 63.158 0.00 0.00 40.13 5.19
230 231 1.228367 AGCAACTGTGAGGCAAGGG 60.228 57.895 0.00 0.00 0.00 3.95
231 232 1.239968 GGAGCAACTGTGAGGCAAGG 61.240 60.000 0.00 0.00 0.00 3.61
232 233 0.535780 TGGAGCAACTGTGAGGCAAG 60.536 55.000 0.00 0.00 0.00 4.01
233 234 0.535780 CTGGAGCAACTGTGAGGCAA 60.536 55.000 0.00 0.00 0.00 4.52
234 235 1.071987 CTGGAGCAACTGTGAGGCA 59.928 57.895 0.00 0.00 0.00 4.75
235 236 0.035630 ATCTGGAGCAACTGTGAGGC 60.036 55.000 0.00 0.00 0.00 4.70
236 237 1.735386 CATCTGGAGCAACTGTGAGG 58.265 55.000 0.00 0.00 0.00 3.86
237 238 1.085091 GCATCTGGAGCAACTGTGAG 58.915 55.000 0.00 0.00 0.00 3.51
238 239 0.671472 CGCATCTGGAGCAACTGTGA 60.671 55.000 0.00 0.00 0.00 3.58
239 240 1.792301 CGCATCTGGAGCAACTGTG 59.208 57.895 0.00 0.00 0.00 3.66
240 241 2.037136 GCGCATCTGGAGCAACTGT 61.037 57.895 0.30 0.00 42.48 3.55
241 242 2.758089 GGCGCATCTGGAGCAACTG 61.758 63.158 10.83 0.00 45.03 3.16
242 243 2.437359 GGCGCATCTGGAGCAACT 60.437 61.111 10.83 0.00 45.03 3.16
243 244 3.869272 CGGCGCATCTGGAGCAAC 61.869 66.667 10.83 0.00 45.03 4.17
251 252 4.880537 CTTCGAGGCGGCGCATCT 62.881 66.667 37.83 25.62 37.20 2.90
252 253 4.873129 TCTTCGAGGCGGCGCATC 62.873 66.667 33.71 33.71 35.92 3.91
253 254 4.451150 TTCTTCGAGGCGGCGCAT 62.451 61.111 34.36 29.23 0.00 4.73
256 257 3.181967 CTGTTCTTCGAGGCGGCG 61.182 66.667 0.51 0.51 0.00 6.46
257 258 3.491652 GCTGTTCTTCGAGGCGGC 61.492 66.667 0.00 0.00 0.00 6.53
258 259 2.815647 GGCTGTTCTTCGAGGCGG 60.816 66.667 0.00 0.00 0.00 6.13
259 260 2.815647 GGGCTGTTCTTCGAGGCG 60.816 66.667 0.00 0.00 35.63 5.52
260 261 2.436824 GGGGCTGTTCTTCGAGGC 60.437 66.667 0.00 0.00 0.00 4.70
261 262 2.125512 CGGGGCTGTTCTTCGAGG 60.126 66.667 0.00 0.00 0.00 4.63
262 263 2.815647 GCGGGGCTGTTCTTCGAG 60.816 66.667 0.00 0.00 0.00 4.04
263 264 4.388499 GGCGGGGCTGTTCTTCGA 62.388 66.667 0.00 0.00 0.00 3.71
264 265 4.394712 AGGCGGGGCTGTTCTTCG 62.395 66.667 0.00 0.00 0.00 3.79
265 266 2.436824 GAGGCGGGGCTGTTCTTC 60.437 66.667 0.00 0.00 0.00 2.87
266 267 4.035102 GGAGGCGGGGCTGTTCTT 62.035 66.667 0.00 0.00 0.00 2.52
268 269 4.115199 ATGGAGGCGGGGCTGTTC 62.115 66.667 0.00 0.00 0.00 3.18
269 270 4.115199 GATGGAGGCGGGGCTGTT 62.115 66.667 0.00 0.00 0.00 3.16
271 272 4.247380 GAGATGGAGGCGGGGCTG 62.247 72.222 0.00 0.00 0.00 4.85
274 275 3.554342 CTGGAGATGGAGGCGGGG 61.554 72.222 0.00 0.00 0.00 5.73
275 276 4.247380 GCTGGAGATGGAGGCGGG 62.247 72.222 0.00 0.00 0.00 6.13
276 277 4.247380 GGCTGGAGATGGAGGCGG 62.247 72.222 0.00 0.00 0.00 6.13
277 278 3.160047 AGGCTGGAGATGGAGGCG 61.160 66.667 0.00 0.00 39.67 5.52
278 279 2.042404 CTCAGGCTGGAGATGGAGGC 62.042 65.000 15.73 0.00 37.05 4.70
279 280 0.690411 ACTCAGGCTGGAGATGGAGG 60.690 60.000 15.73 0.00 38.30 4.30
280 281 1.134461 CAACTCAGGCTGGAGATGGAG 60.134 57.143 15.73 5.08 38.30 3.86
281 282 0.907486 CAACTCAGGCTGGAGATGGA 59.093 55.000 15.73 0.00 38.30 3.41
282 283 0.107312 CCAACTCAGGCTGGAGATGG 60.107 60.000 20.27 20.27 46.88 3.51
283 284 0.907486 TCCAACTCAGGCTGGAGATG 59.093 55.000 15.73 14.26 36.79 2.90
284 285 3.406442 TCCAACTCAGGCTGGAGAT 57.594 52.632 15.73 2.93 36.79 2.75
285 286 4.975490 TCCAACTCAGGCTGGAGA 57.025 55.556 15.73 1.84 36.79 3.71
287 288 1.152030 ACCTCCAACTCAGGCTGGA 60.152 57.895 15.73 3.20 39.47 3.86
288 289 1.002868 CACCTCCAACTCAGGCTGG 60.003 63.158 15.73 8.05 33.84 4.85
289 290 0.617413 ATCACCTCCAACTCAGGCTG 59.383 55.000 8.58 8.58 33.84 4.85
290 291 0.908198 GATCACCTCCAACTCAGGCT 59.092 55.000 0.00 0.00 33.84 4.58
291 292 0.460987 CGATCACCTCCAACTCAGGC 60.461 60.000 0.00 0.00 33.84 4.85
292 293 0.176680 CCGATCACCTCCAACTCAGG 59.823 60.000 0.00 0.00 37.03 3.86
293 294 1.186200 TCCGATCACCTCCAACTCAG 58.814 55.000 0.00 0.00 0.00 3.35
294 295 1.639722 TTCCGATCACCTCCAACTCA 58.360 50.000 0.00 0.00 0.00 3.41
295 296 2.990066 ATTCCGATCACCTCCAACTC 57.010 50.000 0.00 0.00 0.00 3.01
296 297 3.775316 ACTTATTCCGATCACCTCCAACT 59.225 43.478 0.00 0.00 0.00 3.16
297 298 4.138487 ACTTATTCCGATCACCTCCAAC 57.862 45.455 0.00 0.00 0.00 3.77
298 299 5.424252 ACTTACTTATTCCGATCACCTCCAA 59.576 40.000 0.00 0.00 0.00 3.53
299 300 4.960469 ACTTACTTATTCCGATCACCTCCA 59.040 41.667 0.00 0.00 0.00 3.86
300 301 5.532664 ACTTACTTATTCCGATCACCTCC 57.467 43.478 0.00 0.00 0.00 4.30
301 302 6.445475 GGTACTTACTTATTCCGATCACCTC 58.555 44.000 0.00 0.00 0.00 3.85
302 303 5.009410 CGGTACTTACTTATTCCGATCACCT 59.991 44.000 0.00 0.00 40.29 4.00
303 304 5.218139 CGGTACTTACTTATTCCGATCACC 58.782 45.833 0.00 0.00 40.29 4.02
304 305 5.009010 TCCGGTACTTACTTATTCCGATCAC 59.991 44.000 0.00 0.00 40.29 3.06
305 306 5.132502 TCCGGTACTTACTTATTCCGATCA 58.867 41.667 0.00 0.00 40.29 2.92
306 307 5.240403 ACTCCGGTACTTACTTATTCCGATC 59.760 44.000 0.00 0.00 40.29 3.69
307 308 5.009410 CACTCCGGTACTTACTTATTCCGAT 59.991 44.000 0.00 0.00 40.29 4.18
308 309 4.336433 CACTCCGGTACTTACTTATTCCGA 59.664 45.833 0.00 0.00 40.29 4.55
309 310 4.336433 TCACTCCGGTACTTACTTATTCCG 59.664 45.833 0.00 0.00 38.05 4.30
310 311 5.841957 TCACTCCGGTACTTACTTATTCC 57.158 43.478 0.00 0.00 0.00 3.01
311 312 6.636044 CGATTCACTCCGGTACTTACTTATTC 59.364 42.308 0.00 0.00 0.00 1.75
312 313 6.096001 ACGATTCACTCCGGTACTTACTTATT 59.904 38.462 0.00 0.00 0.00 1.40
313 314 5.591877 ACGATTCACTCCGGTACTTACTTAT 59.408 40.000 0.00 0.00 0.00 1.73
314 315 4.943705 ACGATTCACTCCGGTACTTACTTA 59.056 41.667 0.00 0.00 0.00 2.24
315 316 3.760684 ACGATTCACTCCGGTACTTACTT 59.239 43.478 0.00 0.00 0.00 2.24
316 317 3.128242 CACGATTCACTCCGGTACTTACT 59.872 47.826 0.00 0.00 0.00 2.24
317 318 3.127548 TCACGATTCACTCCGGTACTTAC 59.872 47.826 0.00 0.00 0.00 2.34
318 319 3.346315 TCACGATTCACTCCGGTACTTA 58.654 45.455 0.00 0.00 0.00 2.24
319 320 2.165167 TCACGATTCACTCCGGTACTT 58.835 47.619 0.00 0.00 0.00 2.24
320 321 1.830279 TCACGATTCACTCCGGTACT 58.170 50.000 0.00 0.00 0.00 2.73
321 322 2.642139 TTCACGATTCACTCCGGTAC 57.358 50.000 0.00 0.00 0.00 3.34
322 323 2.756207 TGATTCACGATTCACTCCGGTA 59.244 45.455 0.00 0.00 0.00 4.02
323 324 1.548719 TGATTCACGATTCACTCCGGT 59.451 47.619 0.00 0.00 0.00 5.28
324 325 2.293677 TGATTCACGATTCACTCCGG 57.706 50.000 0.00 0.00 0.00 5.14
325 326 3.431912 TGTTTGATTCACGATTCACTCCG 59.568 43.478 0.00 0.00 0.00 4.63
326 327 4.670221 GCTGTTTGATTCACGATTCACTCC 60.670 45.833 0.00 0.00 0.00 3.85
327 328 4.083855 TGCTGTTTGATTCACGATTCACTC 60.084 41.667 0.00 0.00 0.00 3.51
328 329 3.814842 TGCTGTTTGATTCACGATTCACT 59.185 39.130 0.00 0.00 0.00 3.41
329 330 4.145876 TGCTGTTTGATTCACGATTCAC 57.854 40.909 0.00 0.00 0.00 3.18
330 331 4.827304 TTGCTGTTTGATTCACGATTCA 57.173 36.364 0.00 0.00 0.00 2.57
331 332 6.695292 AATTTGCTGTTTGATTCACGATTC 57.305 33.333 0.00 0.00 0.00 2.52
332 333 7.346695 CAAAATTTGCTGTTTGATTCACGATT 58.653 30.769 0.00 0.00 36.96 3.34
333 334 6.879962 CAAAATTTGCTGTTTGATTCACGAT 58.120 32.000 0.00 0.00 36.96 3.73
334 335 6.271396 CAAAATTTGCTGTTTGATTCACGA 57.729 33.333 0.00 0.00 36.96 4.35
349 350 2.032722 AGCACGCATGTTGCAAAATTTG 60.033 40.909 19.63 0.57 45.36 2.32
350 351 2.211806 AGCACGCATGTTGCAAAATTT 58.788 38.095 19.63 0.00 45.36 1.82
351 352 1.868469 AGCACGCATGTTGCAAAATT 58.132 40.000 19.63 0.63 45.36 1.82
352 353 1.868469 AAGCACGCATGTTGCAAAAT 58.132 40.000 19.63 0.00 45.36 1.82
353 354 2.123342 GTAAGCACGCATGTTGCAAAA 58.877 42.857 19.63 0.00 45.36 2.44
354 355 1.764851 GTAAGCACGCATGTTGCAAA 58.235 45.000 19.63 7.60 45.36 3.68
355 356 0.385348 CGTAAGCACGCATGTTGCAA 60.385 50.000 19.63 0.00 45.36 4.08
356 357 1.206325 CGTAAGCACGCATGTTGCA 59.794 52.632 19.63 1.85 45.36 4.08
357 358 4.041026 CGTAAGCACGCATGTTGC 57.959 55.556 12.16 12.16 42.05 4.17
366 367 3.419759 CCGCCCACACGTAAGCAC 61.420 66.667 0.00 0.00 45.62 4.40
367 368 3.931247 ACCGCCCACACGTAAGCA 61.931 61.111 0.00 0.00 45.62 3.91
368 369 3.419759 CACCGCCCACACGTAAGC 61.420 66.667 0.00 0.00 45.62 3.09
370 371 2.280254 CACACCGCCCACACGTAA 60.280 61.111 0.00 0.00 0.00 3.18
371 372 4.302509 CCACACCGCCCACACGTA 62.303 66.667 0.00 0.00 0.00 3.57
374 375 4.555709 TGACCACACCGCCCACAC 62.556 66.667 0.00 0.00 0.00 3.82
375 376 3.765894 CTTGACCACACCGCCCACA 62.766 63.158 0.00 0.00 0.00 4.17
376 377 2.978010 CTTGACCACACCGCCCAC 60.978 66.667 0.00 0.00 0.00 4.61
377 378 4.263572 CCTTGACCACACCGCCCA 62.264 66.667 0.00 0.00 0.00 5.36
382 383 2.978010 CACGGCCTTGACCACACC 60.978 66.667 2.29 0.00 0.00 4.16
383 384 2.978010 CCACGGCCTTGACCACAC 60.978 66.667 11.54 0.00 0.00 3.82
384 385 3.469863 GACCACGGCCTTGACCACA 62.470 63.158 11.54 0.00 0.00 4.17
385 386 2.668550 GACCACGGCCTTGACCAC 60.669 66.667 11.54 0.00 0.00 4.16
386 387 3.948719 GGACCACGGCCTTGACCA 61.949 66.667 11.54 0.00 0.00 4.02
387 388 3.192103 AAGGACCACGGCCTTGACC 62.192 63.158 11.54 13.29 43.84 4.02
388 389 2.430367 AAGGACCACGGCCTTGAC 59.570 61.111 11.54 4.39 43.84 3.18
391 392 2.750350 CTCAAGGACCACGGCCTT 59.250 61.111 0.00 0.00 46.36 4.35
392 393 3.322466 CCTCAAGGACCACGGCCT 61.322 66.667 0.00 0.00 37.39 5.19
393 394 3.316573 CTCCTCAAGGACCACGGCC 62.317 68.421 0.00 0.00 39.78 6.13
394 395 2.232298 CTCTCCTCAAGGACCACGGC 62.232 65.000 0.00 0.00 39.78 5.68
395 396 1.893786 CTCTCCTCAAGGACCACGG 59.106 63.158 0.00 0.00 39.78 4.94
396 397 1.216710 GCTCTCCTCAAGGACCACG 59.783 63.158 0.00 0.00 39.78 4.94
397 398 1.216710 CGCTCTCCTCAAGGACCAC 59.783 63.158 0.00 0.00 39.78 4.16
398 399 1.228894 ACGCTCTCCTCAAGGACCA 60.229 57.895 0.00 0.00 39.78 4.02
399 400 1.513622 GACGCTCTCCTCAAGGACC 59.486 63.158 0.00 0.00 39.78 4.46
400 401 1.251527 TGGACGCTCTCCTCAAGGAC 61.252 60.000 0.00 0.00 39.78 3.85
401 402 0.967887 CTGGACGCTCTCCTCAAGGA 60.968 60.000 0.00 0.00 43.08 3.36
402 403 1.515020 CTGGACGCTCTCCTCAAGG 59.485 63.158 0.00 0.00 40.26 3.61
403 404 1.153667 GCTGGACGCTCTCCTCAAG 60.154 63.158 0.00 0.00 40.26 3.02
404 405 2.650116 GGCTGGACGCTCTCCTCAA 61.650 63.158 0.00 0.00 40.26 3.02
405 406 3.071206 GGCTGGACGCTCTCCTCA 61.071 66.667 0.00 0.00 40.26 3.86
406 407 4.200283 CGGCTGGACGCTCTCCTC 62.200 72.222 0.00 0.00 40.26 3.71
421 422 1.682451 TTATTCTCCACCTCCGGCGG 61.682 60.000 22.51 22.51 0.00 6.13
422 423 0.529992 GTTATTCTCCACCTCCGGCG 60.530 60.000 0.00 0.00 0.00 6.46
423 424 0.179054 GGTTATTCTCCACCTCCGGC 60.179 60.000 0.00 0.00 0.00 6.13
424 425 1.497161 AGGTTATTCTCCACCTCCGG 58.503 55.000 0.00 0.00 39.37 5.14
428 429 0.831307 GCCGAGGTTATTCTCCACCT 59.169 55.000 0.00 0.00 46.78 4.00
429 430 0.529992 CGCCGAGGTTATTCTCCACC 60.530 60.000 0.00 0.00 0.00 4.61
430 431 0.529992 CCGCCGAGGTTATTCTCCAC 60.530 60.000 0.00 0.00 34.51 4.02
431 432 1.682451 CCCGCCGAGGTTATTCTCCA 61.682 60.000 0.00 0.00 38.74 3.86
432 433 1.069258 CCCGCCGAGGTTATTCTCC 59.931 63.158 0.00 0.00 38.74 3.71
433 434 0.249363 GTCCCGCCGAGGTTATTCTC 60.249 60.000 0.00 0.00 38.74 2.87
434 435 0.974010 TGTCCCGCCGAGGTTATTCT 60.974 55.000 0.00 0.00 38.74 2.40
435 436 0.808847 GTGTCCCGCCGAGGTTATTC 60.809 60.000 0.00 0.00 38.74 1.75
436 437 1.219935 GTGTCCCGCCGAGGTTATT 59.780 57.895 0.00 0.00 38.74 1.40
437 438 1.684734 AGTGTCCCGCCGAGGTTAT 60.685 57.895 0.00 0.00 38.74 1.89
438 439 2.283388 AGTGTCCCGCCGAGGTTA 60.283 61.111 0.00 0.00 38.74 2.85
439 440 4.003788 CAGTGTCCCGCCGAGGTT 62.004 66.667 0.00 0.00 38.74 3.50
460 461 2.813908 GGTGGGCGTCGTGATCAC 60.814 66.667 16.21 16.21 0.00 3.06
461 462 4.077184 GGGTGGGCGTCGTGATCA 62.077 66.667 0.00 0.00 0.00 2.92
462 463 3.385749 ATGGGTGGGCGTCGTGATC 62.386 63.158 0.00 0.00 0.00 2.92
463 464 3.385749 GATGGGTGGGCGTCGTGAT 62.386 63.158 0.00 0.00 0.00 3.06
464 465 4.077184 GATGGGTGGGCGTCGTGA 62.077 66.667 0.00 0.00 0.00 4.35
471 472 4.176752 GAGACGGGATGGGTGGGC 62.177 72.222 0.00 0.00 0.00 5.36
472 473 3.480133 GGAGACGGGATGGGTGGG 61.480 72.222 0.00 0.00 0.00 4.61
484 485 2.433318 GTGCCTGCAGACGGAGAC 60.433 66.667 17.39 0.00 30.74 3.36
485 486 4.056125 CGTGCCTGCAGACGGAGA 62.056 66.667 17.39 0.00 30.74 3.71
490 491 4.767255 CCTCCCGTGCCTGCAGAC 62.767 72.222 17.39 3.38 0.00 3.51
492 493 4.463879 CTCCTCCCGTGCCTGCAG 62.464 72.222 6.78 6.78 0.00 4.41
494 495 3.672295 CTTCTCCTCCCGTGCCTGC 62.672 68.421 0.00 0.00 0.00 4.85
495 496 1.954362 CTCTTCTCCTCCCGTGCCTG 61.954 65.000 0.00 0.00 0.00 4.85
496 497 1.684049 CTCTTCTCCTCCCGTGCCT 60.684 63.158 0.00 0.00 0.00 4.75
497 498 2.726351 CCTCTTCTCCTCCCGTGCC 61.726 68.421 0.00 0.00 0.00 5.01
498 499 1.258445 TTCCTCTTCTCCTCCCGTGC 61.258 60.000 0.00 0.00 0.00 5.34
499 500 0.820871 CTTCCTCTTCTCCTCCCGTG 59.179 60.000 0.00 0.00 0.00 4.94
500 501 0.410270 ACTTCCTCTTCTCCTCCCGT 59.590 55.000 0.00 0.00 0.00 5.28
501 502 0.820871 CACTTCCTCTTCTCCTCCCG 59.179 60.000 0.00 0.00 0.00 5.14
502 503 0.539518 GCACTTCCTCTTCTCCTCCC 59.460 60.000 0.00 0.00 0.00 4.30
503 504 1.567357 AGCACTTCCTCTTCTCCTCC 58.433 55.000 0.00 0.00 0.00 4.30
504 505 3.694043 AAAGCACTTCCTCTTCTCCTC 57.306 47.619 0.00 0.00 0.00 3.71
505 506 4.445557 AAAAAGCACTTCCTCTTCTCCT 57.554 40.909 0.00 0.00 0.00 3.69
523 524 7.441458 TCCAAAAAGAAAAACCGAGTTGAAAAA 59.559 29.630 0.00 0.00 0.00 1.94
524 525 6.929606 TCCAAAAAGAAAAACCGAGTTGAAAA 59.070 30.769 0.00 0.00 0.00 2.29
525 526 6.456501 TCCAAAAAGAAAAACCGAGTTGAAA 58.543 32.000 0.00 0.00 0.00 2.69
526 527 6.026947 TCCAAAAAGAAAAACCGAGTTGAA 57.973 33.333 0.00 0.00 0.00 2.69
527 528 5.646577 TCCAAAAAGAAAAACCGAGTTGA 57.353 34.783 0.00 0.00 0.00 3.18
528 529 5.635700 TGTTCCAAAAAGAAAAACCGAGTTG 59.364 36.000 0.00 0.00 0.00 3.16
529 530 5.785243 TGTTCCAAAAAGAAAAACCGAGTT 58.215 33.333 0.00 0.00 0.00 3.01
530 531 5.394224 TGTTCCAAAAAGAAAAACCGAGT 57.606 34.783 0.00 0.00 0.00 4.18
531 532 7.378728 GTCTATGTTCCAAAAAGAAAAACCGAG 59.621 37.037 0.00 0.00 0.00 4.63
532 533 7.197703 GTCTATGTTCCAAAAAGAAAAACCGA 58.802 34.615 0.00 0.00 0.00 4.69
533 534 6.141685 CGTCTATGTTCCAAAAAGAAAAACCG 59.858 38.462 0.00 0.00 0.00 4.44
534 535 6.074516 GCGTCTATGTTCCAAAAAGAAAAACC 60.075 38.462 0.00 0.00 0.00 3.27
535 536 6.474102 TGCGTCTATGTTCCAAAAAGAAAAAC 59.526 34.615 0.00 0.00 0.00 2.43
536 537 6.474102 GTGCGTCTATGTTCCAAAAAGAAAAA 59.526 34.615 0.00 0.00 0.00 1.94
537 538 5.974751 GTGCGTCTATGTTCCAAAAAGAAAA 59.025 36.000 0.00 0.00 0.00 2.29
538 539 5.516090 GTGCGTCTATGTTCCAAAAAGAAA 58.484 37.500 0.00 0.00 0.00 2.52
539 540 4.319190 CGTGCGTCTATGTTCCAAAAAGAA 60.319 41.667 0.00 0.00 0.00 2.52
540 541 3.185594 CGTGCGTCTATGTTCCAAAAAGA 59.814 43.478 0.00 0.00 0.00 2.52
541 542 3.185594 TCGTGCGTCTATGTTCCAAAAAG 59.814 43.478 0.00 0.00 0.00 2.27
542 543 3.132160 TCGTGCGTCTATGTTCCAAAAA 58.868 40.909 0.00 0.00 0.00 1.94
543 544 2.756829 TCGTGCGTCTATGTTCCAAAA 58.243 42.857 0.00 0.00 0.00 2.44
544 545 2.442212 TCGTGCGTCTATGTTCCAAA 57.558 45.000 0.00 0.00 0.00 3.28
545 546 2.333926 CTTCGTGCGTCTATGTTCCAA 58.666 47.619 0.00 0.00 0.00 3.53
546 547 1.990799 CTTCGTGCGTCTATGTTCCA 58.009 50.000 0.00 0.00 0.00 3.53
547 548 0.645868 GCTTCGTGCGTCTATGTTCC 59.354 55.000 0.00 0.00 0.00 3.62
565 566 8.431020 CTTTATTAATTTATAAAGCCGGACGC 57.569 34.615 18.80 0.00 39.73 5.19
577 578 8.748412 TGCTGTCTTGTGGCTTTATTAATTTAT 58.252 29.630 0.00 0.00 0.00 1.40
578 579 8.116651 TGCTGTCTTGTGGCTTTATTAATTTA 57.883 30.769 0.00 0.00 0.00 1.40
579 580 6.991938 TGCTGTCTTGTGGCTTTATTAATTT 58.008 32.000 0.00 0.00 0.00 1.82
580 581 6.588719 TGCTGTCTTGTGGCTTTATTAATT 57.411 33.333 0.00 0.00 0.00 1.40
581 582 6.183360 GGATGCTGTCTTGTGGCTTTATTAAT 60.183 38.462 0.00 0.00 0.00 1.40
582 583 5.125417 GGATGCTGTCTTGTGGCTTTATTAA 59.875 40.000 0.00 0.00 0.00 1.40
583 584 4.640201 GGATGCTGTCTTGTGGCTTTATTA 59.360 41.667 0.00 0.00 0.00 0.98
584 585 3.445096 GGATGCTGTCTTGTGGCTTTATT 59.555 43.478 0.00 0.00 0.00 1.40
585 586 3.019564 GGATGCTGTCTTGTGGCTTTAT 58.980 45.455 0.00 0.00 0.00 1.40
586 587 2.224744 TGGATGCTGTCTTGTGGCTTTA 60.225 45.455 0.00 0.00 0.00 1.85
587 588 1.251251 GGATGCTGTCTTGTGGCTTT 58.749 50.000 0.00 0.00 0.00 3.51
588 589 0.111061 TGGATGCTGTCTTGTGGCTT 59.889 50.000 0.00 0.00 0.00 4.35
589 590 0.111061 TTGGATGCTGTCTTGTGGCT 59.889 50.000 0.00 0.00 0.00 4.75
590 591 0.242017 GTTGGATGCTGTCTTGTGGC 59.758 55.000 0.00 0.00 0.00 5.01
591 592 0.883833 GGTTGGATGCTGTCTTGTGG 59.116 55.000 0.00 0.00 0.00 4.17
592 593 1.538512 CTGGTTGGATGCTGTCTTGTG 59.461 52.381 0.00 0.00 0.00 3.33
593 594 1.546323 CCTGGTTGGATGCTGTCTTGT 60.546 52.381 0.00 0.00 38.35 3.16
594 595 1.171308 CCTGGTTGGATGCTGTCTTG 58.829 55.000 0.00 0.00 38.35 3.02
595 596 0.610232 GCCTGGTTGGATGCTGTCTT 60.610 55.000 0.00 0.00 38.35 3.01
596 597 1.001641 GCCTGGTTGGATGCTGTCT 60.002 57.895 0.00 0.00 38.35 3.41
597 598 0.682209 ATGCCTGGTTGGATGCTGTC 60.682 55.000 0.00 0.00 38.35 3.51
598 599 0.625316 TATGCCTGGTTGGATGCTGT 59.375 50.000 0.00 0.00 38.35 4.40
599 600 1.766494 TTATGCCTGGTTGGATGCTG 58.234 50.000 0.00 0.00 38.35 4.41
600 601 2.590821 GATTATGCCTGGTTGGATGCT 58.409 47.619 0.00 0.00 38.35 3.79
601 602 1.615392 GGATTATGCCTGGTTGGATGC 59.385 52.381 0.00 0.00 38.35 3.91
602 603 2.624838 GTGGATTATGCCTGGTTGGATG 59.375 50.000 0.00 0.00 38.35 3.51
603 604 2.244510 TGTGGATTATGCCTGGTTGGAT 59.755 45.455 0.00 0.00 38.35 3.41
604 605 1.638070 TGTGGATTATGCCTGGTTGGA 59.362 47.619 0.00 0.00 38.35 3.53
605 606 2.142356 TGTGGATTATGCCTGGTTGG 57.858 50.000 0.00 0.00 39.35 3.77
606 607 3.289836 TGATGTGGATTATGCCTGGTTG 58.710 45.455 0.00 0.00 0.00 3.77
607 608 3.668141 TGATGTGGATTATGCCTGGTT 57.332 42.857 0.00 0.00 0.00 3.67
608 609 3.290710 GTTGATGTGGATTATGCCTGGT 58.709 45.455 0.00 0.00 0.00 4.00
609 610 3.289836 TGTTGATGTGGATTATGCCTGG 58.710 45.455 0.00 0.00 0.00 4.45
610 611 6.638096 TTATGTTGATGTGGATTATGCCTG 57.362 37.500 0.00 0.00 0.00 4.85
611 612 7.123997 TGTTTTATGTTGATGTGGATTATGCCT 59.876 33.333 0.00 0.00 0.00 4.75
612 613 7.264221 TGTTTTATGTTGATGTGGATTATGCC 58.736 34.615 0.00 0.00 0.00 4.40
613 614 8.876275 ATGTTTTATGTTGATGTGGATTATGC 57.124 30.769 0.00 0.00 0.00 3.14
622 623 9.075519 CGCTGAAATTATGTTTTATGTTGATGT 57.924 29.630 0.00 0.00 0.00 3.06
623 624 8.533965 CCGCTGAAATTATGTTTTATGTTGATG 58.466 33.333 0.00 0.00 0.00 3.07
624 625 7.706179 CCCGCTGAAATTATGTTTTATGTTGAT 59.294 33.333 0.00 0.00 0.00 2.57
625 626 7.032580 CCCGCTGAAATTATGTTTTATGTTGA 58.967 34.615 0.00 0.00 0.00 3.18
626 627 6.237808 GCCCGCTGAAATTATGTTTTATGTTG 60.238 38.462 0.00 0.00 0.00 3.33
627 628 5.810074 GCCCGCTGAAATTATGTTTTATGTT 59.190 36.000 0.00 0.00 0.00 2.71
628 629 5.105554 TGCCCGCTGAAATTATGTTTTATGT 60.106 36.000 0.00 0.00 0.00 2.29
629 630 5.231991 GTGCCCGCTGAAATTATGTTTTATG 59.768 40.000 0.00 0.00 0.00 1.90
630 631 5.348164 GTGCCCGCTGAAATTATGTTTTAT 58.652 37.500 0.00 0.00 0.00 1.40
631 632 4.673061 CGTGCCCGCTGAAATTATGTTTTA 60.673 41.667 0.00 0.00 0.00 1.52
632 633 3.584834 GTGCCCGCTGAAATTATGTTTT 58.415 40.909 0.00 0.00 0.00 2.43
633 634 2.415357 CGTGCCCGCTGAAATTATGTTT 60.415 45.455 0.00 0.00 0.00 2.83
634 635 1.132262 CGTGCCCGCTGAAATTATGTT 59.868 47.619 0.00 0.00 0.00 2.71
635 636 0.732571 CGTGCCCGCTGAAATTATGT 59.267 50.000 0.00 0.00 0.00 2.29
636 637 3.532138 CGTGCCCGCTGAAATTATG 57.468 52.632 0.00 0.00 0.00 1.90
651 652 3.726517 CTTTGCCGGGACTGCGTG 61.727 66.667 2.18 0.00 43.04 5.34
652 653 2.781595 CTACTTTGCCGGGACTGCGT 62.782 60.000 2.18 0.00 43.04 5.24
653 654 2.047655 TACTTTGCCGGGACTGCG 60.048 61.111 2.18 0.00 43.04 5.18
654 655 0.321298 TTCTACTTTGCCGGGACTGC 60.321 55.000 2.18 0.00 39.63 4.40
655 656 1.804748 GTTTCTACTTTGCCGGGACTG 59.195 52.381 2.18 0.00 0.00 3.51
656 657 1.697982 AGTTTCTACTTTGCCGGGACT 59.302 47.619 2.18 0.00 0.00 3.85
657 658 2.180432 AGTTTCTACTTTGCCGGGAC 57.820 50.000 2.18 0.00 0.00 4.46
658 659 4.563140 ATTAGTTTCTACTTTGCCGGGA 57.437 40.909 2.18 0.00 35.78 5.14
659 660 5.425630 ACTATTAGTTTCTACTTTGCCGGG 58.574 41.667 2.18 0.00 35.78 5.73
660 661 6.592607 TGAACTATTAGTTTCTACTTTGCCGG 59.407 38.462 10.32 0.00 38.80 6.13
661 662 7.412672 GGTGAACTATTAGTTTCTACTTTGCCG 60.413 40.741 10.32 0.00 38.80 5.69
662 663 7.389607 TGGTGAACTATTAGTTTCTACTTTGCC 59.610 37.037 10.32 4.33 38.80 4.52
663 664 8.319143 TGGTGAACTATTAGTTTCTACTTTGC 57.681 34.615 10.32 0.00 38.80 3.68
665 666 9.503399 CCTTGGTGAACTATTAGTTTCTACTTT 57.497 33.333 10.32 0.00 38.80 2.66
666 667 7.606839 GCCTTGGTGAACTATTAGTTTCTACTT 59.393 37.037 10.32 0.00 38.80 2.24
667 668 7.104290 GCCTTGGTGAACTATTAGTTTCTACT 58.896 38.462 10.32 0.00 38.80 2.57
668 669 6.035758 CGCCTTGGTGAACTATTAGTTTCTAC 59.964 42.308 10.32 9.73 38.80 2.59
669 670 6.071221 TCGCCTTGGTGAACTATTAGTTTCTA 60.071 38.462 10.32 3.37 38.80 2.10
670 671 4.935808 CGCCTTGGTGAACTATTAGTTTCT 59.064 41.667 10.32 0.00 38.80 2.52
671 672 4.933400 TCGCCTTGGTGAACTATTAGTTTC 59.067 41.667 10.32 7.19 38.80 2.78
672 673 4.694037 GTCGCCTTGGTGAACTATTAGTTT 59.306 41.667 10.32 0.00 38.80 2.66
673 674 4.251268 GTCGCCTTGGTGAACTATTAGTT 58.749 43.478 8.81 8.81 41.95 2.24
674 675 3.675228 CGTCGCCTTGGTGAACTATTAGT 60.675 47.826 4.32 0.00 0.00 2.24
675 676 2.858344 CGTCGCCTTGGTGAACTATTAG 59.142 50.000 4.32 0.00 0.00 1.73
676 677 2.492881 TCGTCGCCTTGGTGAACTATTA 59.507 45.455 4.32 0.00 0.00 0.98
677 678 1.274167 TCGTCGCCTTGGTGAACTATT 59.726 47.619 4.32 0.00 0.00 1.73
678 679 0.892755 TCGTCGCCTTGGTGAACTAT 59.107 50.000 4.32 0.00 0.00 2.12
679 680 0.892755 ATCGTCGCCTTGGTGAACTA 59.107 50.000 4.32 0.00 0.00 2.24
680 681 0.892755 TATCGTCGCCTTGGTGAACT 59.107 50.000 4.32 0.00 0.00 3.01
681 682 1.135199 TCTATCGTCGCCTTGGTGAAC 60.135 52.381 4.32 0.00 0.00 3.18
682 683 1.179152 TCTATCGTCGCCTTGGTGAA 58.821 50.000 4.32 0.00 0.00 3.18
683 684 1.135199 GTTCTATCGTCGCCTTGGTGA 60.135 52.381 0.00 0.00 0.00 4.02
684 685 1.278238 GTTCTATCGTCGCCTTGGTG 58.722 55.000 0.00 0.00 0.00 4.17
685 686 0.892755 TGTTCTATCGTCGCCTTGGT 59.107 50.000 0.00 0.00 0.00 3.67
686 687 2.225068 ATGTTCTATCGTCGCCTTGG 57.775 50.000 0.00 0.00 0.00 3.61
687 688 4.360563 AGTTATGTTCTATCGTCGCCTTG 58.639 43.478 0.00 0.00 0.00 3.61
688 689 4.650754 AGTTATGTTCTATCGTCGCCTT 57.349 40.909 0.00 0.00 0.00 4.35
689 690 4.319333 CGTAGTTATGTTCTATCGTCGCCT 60.319 45.833 0.00 0.00 0.00 5.52
690 691 3.904824 CGTAGTTATGTTCTATCGTCGCC 59.095 47.826 0.00 0.00 0.00 5.54
691 692 4.521943 ACGTAGTTATGTTCTATCGTCGC 58.478 43.478 0.00 0.00 37.78 5.19
692 693 7.098503 TCTACGTAGTTATGTTCTATCGTCG 57.901 40.000 21.53 0.00 37.78 5.12
693 694 9.950858 GTATCTACGTAGTTATGTTCTATCGTC 57.049 37.037 21.53 0.00 37.78 4.20
694 695 9.703892 AGTATCTACGTAGTTATGTTCTATCGT 57.296 33.333 21.53 0.00 37.78 3.73
699 700 9.190858 CGTCTAGTATCTACGTAGTTATGTTCT 57.809 37.037 21.53 12.76 37.78 3.01
700 701 7.949428 GCGTCTAGTATCTACGTAGTTATGTTC 59.051 40.741 21.53 6.68 37.78 3.18
701 702 7.439356 TGCGTCTAGTATCTACGTAGTTATGTT 59.561 37.037 21.53 10.29 37.78 2.71
702 703 6.925718 TGCGTCTAGTATCTACGTAGTTATGT 59.074 38.462 21.53 11.63 37.78 2.29
703 704 7.343614 TGCGTCTAGTATCTACGTAGTTATG 57.656 40.000 21.53 11.85 37.78 1.90
704 705 7.953158 TTGCGTCTAGTATCTACGTAGTTAT 57.047 36.000 21.53 11.64 37.78 1.89
705 706 7.517417 GCTTTGCGTCTAGTATCTACGTAGTTA 60.517 40.741 21.53 14.96 37.78 2.24
706 707 6.668541 TTTGCGTCTAGTATCTACGTAGTT 57.331 37.500 21.53 15.98 37.78 2.24
708 709 5.138788 GCTTTGCGTCTAGTATCTACGTAG 58.861 45.833 16.73 16.73 38.81 3.51
709 710 4.571984 TGCTTTGCGTCTAGTATCTACGTA 59.428 41.667 0.00 0.00 38.81 3.57
710 711 3.376234 TGCTTTGCGTCTAGTATCTACGT 59.624 43.478 0.00 0.00 38.81 3.57
711 712 3.724751 GTGCTTTGCGTCTAGTATCTACG 59.275 47.826 0.00 0.00 39.55 3.51
712 713 4.922719 AGTGCTTTGCGTCTAGTATCTAC 58.077 43.478 0.00 0.00 0.00 2.59
713 714 4.260661 CGAGTGCTTTGCGTCTAGTATCTA 60.261 45.833 0.00 0.00 0.00 1.98
714 715 3.487711 CGAGTGCTTTGCGTCTAGTATCT 60.488 47.826 0.00 0.00 0.00 1.98
715 716 2.784380 CGAGTGCTTTGCGTCTAGTATC 59.216 50.000 0.00 0.00 0.00 2.24
716 717 2.163815 ACGAGTGCTTTGCGTCTAGTAT 59.836 45.455 0.00 0.00 31.98 2.12
717 718 1.538512 ACGAGTGCTTTGCGTCTAGTA 59.461 47.619 0.00 0.00 31.98 1.82
718 719 0.314302 ACGAGTGCTTTGCGTCTAGT 59.686 50.000 0.00 0.00 31.98 2.57
719 720 3.108521 ACGAGTGCTTTGCGTCTAG 57.891 52.632 0.00 0.00 31.98 2.43
723 724 1.664965 GGAGACGAGTGCTTTGCGT 60.665 57.895 0.00 0.00 41.45 5.24
724 725 3.159984 GGAGACGAGTGCTTTGCG 58.840 61.111 0.00 0.00 0.00 4.85
1117 1124 2.370281 AGACATCTGCAACACCTACG 57.630 50.000 0.00 0.00 0.00 3.51
2277 2474 6.156256 TCCCAACATACTACAAACATAGCTCT 59.844 38.462 0.00 0.00 0.00 4.09
2605 2803 3.328931 TCACCCAGCTGAGATTCTTTTCT 59.671 43.478 17.39 0.00 0.00 2.52
2746 2944 3.181506 GCAAAATAGCTCGGACCTTCTTG 60.182 47.826 0.00 0.00 0.00 3.02
2827 3025 0.868406 CCACGTCTTCTTCAAGTGCC 59.132 55.000 0.00 0.00 0.00 5.01
2893 3091 2.522923 TGGCCAAACGCAATGGGT 60.523 55.556 0.61 0.00 40.31 4.51
2930 3128 1.135257 TGGCAAATATTTCGCAACCGG 60.135 47.619 18.16 0.00 34.56 5.28
2990 3188 3.578716 GGCTTGATATGTACAGAGGGCTA 59.421 47.826 0.33 0.00 0.00 3.93
2996 3194 4.202461 GGGAATGGGCTTGATATGTACAGA 60.202 45.833 0.33 0.00 0.00 3.41
3000 3198 3.330701 GAGGGGAATGGGCTTGATATGTA 59.669 47.826 0.00 0.00 0.00 2.29
3001 3199 2.108952 GAGGGGAATGGGCTTGATATGT 59.891 50.000 0.00 0.00 0.00 2.29
3029 3227 6.211587 TCGGTGAAATCCTTATACGAGAAA 57.788 37.500 0.00 0.00 0.00 2.52
3083 3281 1.617850 AGCCAGGATCACGATCAGATC 59.382 52.381 13.95 13.95 40.86 2.75
3092 3290 0.463620 GGAGTCTCAGCCAGGATCAC 59.536 60.000 1.47 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.