Multiple sequence alignment - TraesCS5A01G090100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G090100 chr5A 100.000 7565 0 0 1 7565 121408306 121415870 0.000000e+00 13971.0
1 TraesCS5A01G090100 chr5D 97.373 4759 91 19 333 5061 115398332 115403086 0.000000e+00 8065.0
2 TraesCS5A01G090100 chr5D 89.975 1177 69 27 5947 7114 115404318 115405454 0.000000e+00 1474.0
3 TraesCS5A01G090100 chr5D 97.115 832 24 0 5120 5951 115403274 115404105 0.000000e+00 1404.0
4 TraesCS5A01G090100 chr5D 87.580 314 30 6 17 325 115394944 115395253 9.340000e-94 355.0
5 TraesCS5A01G090100 chr5B 95.708 4217 119 34 280 4458 126595287 126599479 0.000000e+00 6728.0
6 TraesCS5A01G090100 chr5B 93.024 2007 98 20 5120 7114 126602099 126604075 0.000000e+00 2892.0
7 TraesCS5A01G090100 chr5B 93.659 615 14 9 4447 5061 126601322 126601911 0.000000e+00 896.0
8 TraesCS5A01G090100 chr5B 88.760 258 27 2 1 257 126588342 126588598 1.580000e-81 315.0
9 TraesCS5A01G090100 chr5B 91.620 179 12 3 53 228 355610180 355610002 2.110000e-60 244.0
10 TraesCS5A01G090100 chr5B 89.503 181 13 6 53 228 317297182 317297361 2.750000e-54 224.0
11 TraesCS5A01G090100 chr5B 92.857 56 4 0 1 56 407636103 407636048 1.750000e-11 82.4
12 TraesCS5A01G090100 chr3D 89.251 307 30 2 3444 3750 46556037 46555734 1.540000e-101 381.0
13 TraesCS5A01G090100 chr3A 88.925 307 28 3 3444 3750 57958551 57958851 2.580000e-99 374.0
14 TraesCS5A01G090100 chr3A 85.000 240 24 2 53 280 182624572 182624811 4.560000e-57 233.0
15 TraesCS5A01G090100 chr3A 92.857 56 4 0 1 56 398819 398874 1.750000e-11 82.4
16 TraesCS5A01G090100 chr7B 87.500 312 37 2 3443 3754 13823405 13823714 7.220000e-95 359.0
17 TraesCS5A01G090100 chr4D 83.861 316 46 5 3436 3750 494472565 494472876 5.740000e-76 296.0
18 TraesCS5A01G090100 chr4D 94.643 56 3 0 1 56 351463899 351463954 3.760000e-13 87.9
19 TraesCS5A01G090100 chr4D 97.059 34 1 0 277 310 355276310 355276343 2.950000e-04 58.4
20 TraesCS5A01G090100 chr1B 85.818 275 35 3 3473 3747 348472808 348473078 9.600000e-74 289.0
21 TraesCS5A01G090100 chr7D 82.132 319 48 9 3435 3750 148145483 148145171 1.620000e-66 265.0
22 TraesCS5A01G090100 chr1D 82.019 317 45 11 3438 3750 63559182 63558874 7.530000e-65 259.0
23 TraesCS5A01G090100 chr1D 91.573 178 10 4 53 228 337775183 337775357 2.730000e-59 241.0
24 TraesCS5A01G090100 chr1D 90.449 178 13 4 53 228 162218922 162219097 1.640000e-56 231.0
25 TraesCS5A01G090100 chr1D 90.449 178 13 4 53 228 162651466 162651641 1.640000e-56 231.0
26 TraesCS5A01G090100 chr2D 85.957 235 22 8 53 276 378094228 378093994 2.730000e-59 241.0
27 TraesCS5A01G090100 chr2D 96.970 33 1 0 277 309 56450333 56450301 1.000000e-03 56.5
28 TraesCS5A01G090100 chr4A 87.222 180 18 5 70 246 617048156 617047979 4.630000e-47 200.0
29 TraesCS5A01G090100 chr3B 73.667 300 56 17 22 303 455559190 455558896 2.250000e-15 95.3
30 TraesCS5A01G090100 chr3B 92.727 55 4 0 2 56 244229605 244229551 6.290000e-11 80.5
31 TraesCS5A01G090100 chr3B 97.143 35 1 0 269 303 746021629 746021663 8.200000e-05 60.2
32 TraesCS5A01G090100 chr2B 92.857 56 4 0 1 56 649049 649104 1.750000e-11 82.4
33 TraesCS5A01G090100 chr2B 92.857 56 4 0 1 56 29889026 29888971 1.750000e-11 82.4
34 TraesCS5A01G090100 chr6D 91.071 56 5 0 1 56 456297985 456298040 8.140000e-10 76.8
35 TraesCS5A01G090100 chr6A 96.970 33 1 0 271 303 533991991 533992023 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G090100 chr5A 121408306 121415870 7564 False 13971.000000 13971 100.000000 1 7565 1 chr5A.!!$F1 7564
1 TraesCS5A01G090100 chr5D 115394944 115405454 10510 False 2824.500000 8065 93.010750 17 7114 4 chr5D.!!$F1 7097
2 TraesCS5A01G090100 chr5B 126595287 126604075 8788 False 3505.333333 6728 94.130333 280 7114 3 chr5B.!!$F3 6834

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
278 280 0.469518 ATCCCGGCCAGAGGTAGTAC 60.470 60.000 2.24 0.00 0.00 2.73 F
1015 4127 1.214325 CACATGTACCAGACGCCGA 59.786 57.895 0.00 0.00 0.00 5.54 F
1138 4250 0.321122 CTCTGGCTCGCCAACTTCTT 60.321 55.000 12.29 0.00 46.63 2.52 F
1281 4393 2.040544 AGGCCATCGCAGAAAACGG 61.041 57.895 5.01 0.00 43.58 4.44 F
3302 6420 2.425312 CTCCATGCTCAGAGAGTAACGT 59.575 50.000 0.00 0.00 31.43 3.99 F
3317 6435 0.687354 AACGTGTCTGGAATCAGCCT 59.313 50.000 0.00 0.00 40.69 4.58 F
5061 10035 0.321653 CGCCTCAGCCTTTACAACCT 60.322 55.000 0.00 0.00 34.57 3.50 F
6305 11626 0.036952 ACAAGTCACATGCCTCGAGG 60.037 55.000 27.83 27.83 38.53 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1138 4250 0.684535 TCTGACTCGCCATGGTTCAA 59.315 50.000 14.67 0.00 0.00 2.69 R
2820 5937 1.616865 TCCAGAACAGGACTTACACCG 59.383 52.381 0.00 0.00 31.23 4.94 R
2984 6101 5.279708 CCTGAAGAGGCAGTTTCTTCTTCTA 60.280 44.000 13.36 3.79 46.78 2.10 R
3317 6435 1.464734 CTCTCTAGCTTCCGGTGACA 58.535 55.000 0.00 0.00 0.00 3.58 R
4975 9949 0.037419 TGTGCTTGCGCTACATCTGA 60.037 50.000 9.73 0.00 36.97 3.27 R
5087 10124 0.321653 ATTCGCCGGAGCTTCAACTT 60.322 50.000 5.05 0.00 36.60 2.66 R
6436 11763 0.033920 ACTGCATGTGAAGACTGCGA 59.966 50.000 0.00 0.00 38.75 5.10 R
7388 12730 0.179067 ACGTCACGGTGAACATGGTT 60.179 50.000 13.23 0.00 0.00 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 9.796180 CCACTATAGAGGTAGTAACATAGACTT 57.204 37.037 6.78 0.00 33.29 3.01
62 63 1.855295 TACGCATGTTACTCCCTCCA 58.145 50.000 0.00 0.00 0.00 3.86
63 64 1.204146 ACGCATGTTACTCCCTCCAT 58.796 50.000 0.00 0.00 0.00 3.41
64 65 1.139058 ACGCATGTTACTCCCTCCATC 59.861 52.381 0.00 0.00 0.00 3.51
65 66 1.541233 CGCATGTTACTCCCTCCATCC 60.541 57.143 0.00 0.00 0.00 3.51
66 67 1.541233 GCATGTTACTCCCTCCATCCG 60.541 57.143 0.00 0.00 0.00 4.18
67 68 1.070758 CATGTTACTCCCTCCATCCGG 59.929 57.143 0.00 0.00 0.00 5.14
71 72 2.438392 GTTACTCCCTCCATCCGGATTT 59.562 50.000 16.19 0.00 41.79 2.17
73 74 2.991580 ACTCCCTCCATCCGGATTTAT 58.008 47.619 16.19 0.00 41.79 1.40
75 76 2.906389 CTCCCTCCATCCGGATTTATCA 59.094 50.000 16.19 0.00 41.79 2.15
76 77 2.906389 TCCCTCCATCCGGATTTATCAG 59.094 50.000 16.19 1.69 41.79 2.90
77 78 2.026822 CCCTCCATCCGGATTTATCAGG 60.027 54.545 16.19 12.21 41.79 3.86
78 79 2.616510 CCTCCATCCGGATTTATCAGGC 60.617 54.545 16.19 0.00 41.79 4.85
79 80 1.351017 TCCATCCGGATTTATCAGGCC 59.649 52.381 16.19 0.00 41.21 5.19
80 81 1.352352 CCATCCGGATTTATCAGGCCT 59.648 52.381 16.19 0.00 41.21 5.19
81 82 2.616510 CCATCCGGATTTATCAGGCCTC 60.617 54.545 16.19 0.00 41.21 4.70
113 114 7.368198 TGGGCTAAAGTTTGACCTAAAAATT 57.632 32.000 10.19 0.00 31.89 1.82
114 115 7.797062 TGGGCTAAAGTTTGACCTAAAAATTT 58.203 30.769 10.19 1.51 39.71 1.82
187 188 7.373493 AGCTCTTTCAAATACAAATCCAACAG 58.627 34.615 0.00 0.00 0.00 3.16
188 189 7.014615 AGCTCTTTCAAATACAAATCCAACAGT 59.985 33.333 0.00 0.00 0.00 3.55
241 242 5.986501 AGTAGTCTAAGTCTGACCCAAAG 57.013 43.478 3.76 0.00 35.21 2.77
244 245 5.986501 AGTCTAAGTCTGACCCAAAGTAG 57.013 43.478 3.76 0.00 35.21 2.57
252 253 2.642807 CTGACCCAAAGTAGGAAGGGAA 59.357 50.000 2.90 0.00 44.30 3.97
266 267 3.920031 GGAACCAAGAATCCCGGC 58.080 61.111 0.00 0.00 0.00 6.13
267 268 1.753078 GGAACCAAGAATCCCGGCC 60.753 63.158 0.00 0.00 0.00 6.13
268 269 1.001393 GAACCAAGAATCCCGGCCA 60.001 57.895 2.24 0.00 0.00 5.36
270 271 1.497309 AACCAAGAATCCCGGCCAGA 61.497 55.000 2.24 0.00 0.00 3.86
275 277 0.760945 AGAATCCCGGCCAGAGGTAG 60.761 60.000 2.24 0.00 0.00 3.18
278 280 0.469518 ATCCCGGCCAGAGGTAGTAC 60.470 60.000 2.24 0.00 0.00 2.73
349 3424 2.104170 TGCTCCCAGGAAAAACGTTTT 58.896 42.857 20.26 20.26 0.00 2.43
367 3442 4.664891 CGTTTTCGGAAAGGACACGAATAC 60.665 45.833 16.35 0.00 44.72 1.89
534 3620 2.375146 GGGTTTGCCGTTCCTCATAAT 58.625 47.619 0.00 0.00 34.97 1.28
802 3912 2.743718 CCGTCCTTGGTGAGTGCT 59.256 61.111 0.00 0.00 0.00 4.40
993 4105 3.028094 TCCTCGTATCTTTAGGCCTGT 57.972 47.619 17.99 0.00 0.00 4.00
1015 4127 1.214325 CACATGTACCAGACGCCGA 59.786 57.895 0.00 0.00 0.00 5.54
1028 4140 4.910585 GCCGACATACCCAGGCGG 62.911 72.222 2.53 2.53 44.47 6.13
1074 4186 3.364889 TTGATGGATACGCCTCTTACG 57.635 47.619 0.00 0.00 42.51 3.18
1138 4250 0.321122 CTCTGGCTCGCCAACTTCTT 60.321 55.000 12.29 0.00 46.63 2.52
1185 4297 4.986659 GCACAAGAAATGAGCACAAATTCT 59.013 37.500 8.92 8.92 44.08 2.40
1281 4393 2.040544 AGGCCATCGCAGAAAACGG 61.041 57.895 5.01 0.00 43.58 4.44
1397 4509 7.865706 ATAGTCCATTTACCTGTGAACATTC 57.134 36.000 0.00 0.00 0.00 2.67
1528 4640 6.456501 ACGCAGAAAAGAATAGAGTAGTTGT 58.543 36.000 0.00 0.00 0.00 3.32
1747 4859 6.773976 ACTTTCATGAACTTTTGGAGAACA 57.226 33.333 7.89 0.00 0.00 3.18
1750 4862 8.352942 ACTTTCATGAACTTTTGGAGAACATAC 58.647 33.333 7.89 0.00 0.00 2.39
2820 5937 3.582164 AGAGAGTATTGATCACCCCTCC 58.418 50.000 0.00 0.00 0.00 4.30
2997 6114 9.841880 GTGAAAACTTGTTTAGAAGAAGAAACT 57.158 29.630 4.80 0.00 36.66 2.66
3057 6174 6.202516 GAGCCTATCGAGCATAACTATTCT 57.797 41.667 0.00 0.00 0.00 2.40
3101 6218 6.936900 TCCTATATGCTTTTCTATGCCAACTC 59.063 38.462 0.00 0.00 0.00 3.01
3116 6233 4.761739 TGCCAACTCCACTTCTCTTAAATG 59.238 41.667 0.00 0.00 0.00 2.32
3229 6346 9.334947 AGTACAATATTTCCATGTTCATCAGAG 57.665 33.333 0.00 0.00 0.00 3.35
3302 6420 2.425312 CTCCATGCTCAGAGAGTAACGT 59.575 50.000 0.00 0.00 31.43 3.99
3317 6435 0.687354 AACGTGTCTGGAATCAGCCT 59.313 50.000 0.00 0.00 40.69 4.58
3537 6657 7.030165 TCTTCTCGATGCACTTTAAAGTAGAG 58.970 38.462 20.15 19.81 37.08 2.43
3603 6723 2.549064 TCAACACATGGTCTCCACAG 57.451 50.000 0.00 0.00 35.80 3.66
3616 6736 4.218417 GGTCTCCACAGTTTTTACATGCAT 59.782 41.667 0.00 0.00 0.00 3.96
3631 6751 4.529897 ACATGCATTTAGCTCATTGGAGA 58.470 39.130 0.00 0.00 44.26 3.71
4029 7149 3.619038 GCTTATTCTCTGGAACACCTTCG 59.381 47.826 0.00 0.00 33.96 3.79
4093 7213 7.334421 TCATCAGAGCAGGTGTTCTATTTTTAC 59.666 37.037 0.00 0.00 33.74 2.01
4245 7365 7.275920 ACTAGCAATATTGAACCTCCAGTAAG 58.724 38.462 19.73 3.15 0.00 2.34
4273 7393 4.880120 CCATGAGCTGTGTTGTTGATAGAT 59.120 41.667 0.00 0.00 0.00 1.98
4424 7544 0.738975 CAGCATTGCACAGCATAGCT 59.261 50.000 11.91 11.32 45.14 3.32
4445 7565 5.651530 GCTATCAAGCTAGAACTGTGTGTA 58.348 41.667 0.00 0.00 45.85 2.90
4515 9489 7.328493 GCCCATTTGTTTGATTGTACTTAAGTC 59.672 37.037 12.39 4.83 0.00 3.01
4541 9515 4.514441 GGATATTCTGTCTGGTGCAGATTG 59.486 45.833 0.00 0.00 42.73 2.67
4735 9709 7.397221 TGACATGTATCAGGATTCTTCAAGTT 58.603 34.615 0.00 0.00 0.00 2.66
4757 9731 1.275010 TGACCATAGAAGCGCTGAACA 59.725 47.619 12.58 0.00 0.00 3.18
4793 9767 5.641209 AGAGTGATGTTGCTTTACAGTCATC 59.359 40.000 0.00 0.00 39.62 2.92
4975 9949 2.947652 CAGACAAATCGATCTGCCCAAT 59.052 45.455 0.00 0.00 36.22 3.16
5041 10015 1.148273 GGTCTGTCTGGTGTGGCAA 59.852 57.895 0.00 0.00 0.00 4.52
5061 10035 0.321653 CGCCTCAGCCTTTACAACCT 60.322 55.000 0.00 0.00 34.57 3.50
5063 10037 1.271379 GCCTCAGCCTTTACAACCTGA 60.271 52.381 0.00 0.00 33.65 3.86
5065 10039 3.486383 CCTCAGCCTTTACAACCTGAAA 58.514 45.455 0.00 0.00 34.28 2.69
5066 10040 4.082125 CCTCAGCCTTTACAACCTGAAAT 58.918 43.478 0.00 0.00 34.28 2.17
5067 10041 4.082571 CCTCAGCCTTTACAACCTGAAATG 60.083 45.833 0.00 0.00 34.28 2.32
5069 10043 3.005684 CAGCCTTTACAACCTGAAATGCA 59.994 43.478 0.00 0.00 31.10 3.96
5070 10044 3.640967 AGCCTTTACAACCTGAAATGCAA 59.359 39.130 0.00 0.00 31.10 4.08
5073 10047 4.501229 CCTTTACAACCTGAAATGCAAGCA 60.501 41.667 0.00 0.00 0.00 3.91
5074 10048 4.870123 TTACAACCTGAAATGCAAGCAT 57.130 36.364 0.86 0.86 38.46 3.79
5075 10049 3.308438 ACAACCTGAAATGCAAGCATC 57.692 42.857 8.14 0.00 35.31 3.91
5077 10051 3.259876 ACAACCTGAAATGCAAGCATCAT 59.740 39.130 8.14 0.50 35.31 2.45
5078 10052 4.250464 CAACCTGAAATGCAAGCATCATT 58.750 39.130 8.14 0.00 35.31 2.57
5079 10053 3.857052 ACCTGAAATGCAAGCATCATTG 58.143 40.909 8.14 1.78 35.31 2.82
5083 10120 5.163591 CCTGAAATGCAAGCATCATTGTCTA 60.164 40.000 8.14 0.00 35.31 2.59
5086 10123 2.646930 TGCAAGCATCATTGTCTAGGG 58.353 47.619 0.00 0.00 32.56 3.53
5087 10124 2.239402 TGCAAGCATCATTGTCTAGGGA 59.761 45.455 0.00 0.00 32.56 4.20
5088 10125 3.282021 GCAAGCATCATTGTCTAGGGAA 58.718 45.455 0.00 0.00 32.56 3.97
5091 10128 4.851639 AGCATCATTGTCTAGGGAAGTT 57.148 40.909 0.00 0.00 0.00 2.66
5095 10132 5.065731 GCATCATTGTCTAGGGAAGTTGAAG 59.934 44.000 0.00 0.00 0.00 3.02
5099 10136 2.567615 TGTCTAGGGAAGTTGAAGCTCC 59.432 50.000 0.00 0.00 0.00 4.70
5101 10138 0.902531 TAGGGAAGTTGAAGCTCCGG 59.097 55.000 0.00 0.00 0.00 5.14
5103 10140 2.391389 GGAAGTTGAAGCTCCGGCG 61.391 63.158 0.00 0.00 44.37 6.46
5107 10144 1.021390 AGTTGAAGCTCCGGCGAATG 61.021 55.000 9.30 0.00 44.37 2.67
5114 10151 1.014352 GCTCCGGCGAATGTTGTAAT 58.986 50.000 9.30 0.00 0.00 1.89
5138 10241 1.602888 CTGCTCAGCCTTTGGTGCT 60.603 57.895 0.00 0.00 39.84 4.40
5185 10288 4.932799 TGTCAAATATTCCGCTCGAAAGAA 59.067 37.500 0.00 0.00 41.32 2.52
5410 10513 9.453572 TTTTCTCTTGCTTACATACATCTTGAT 57.546 29.630 0.00 0.00 0.00 2.57
5458 10561 8.301252 TGGATTCATCATGTTCTCATTGATTT 57.699 30.769 0.00 0.00 31.15 2.17
5721 10824 8.463930 TTTGATGTGTAGAGAAGGATTTTGTT 57.536 30.769 0.00 0.00 0.00 2.83
5723 10826 9.567776 TTGATGTGTAGAGAAGGATTTTGTTAA 57.432 29.630 0.00 0.00 0.00 2.01
5747 10850 3.626028 AATTTCTGTTGCCACGTCTTC 57.374 42.857 0.00 0.00 0.00 2.87
5771 10874 6.265649 TCTTTTTATCGTGGGTTTTGGATTCA 59.734 34.615 0.00 0.00 0.00 2.57
5836 10939 6.798482 TCAGTGTTTGGATGATCAATTATGC 58.202 36.000 0.00 0.00 0.00 3.14
5860 10964 9.123709 TGCTTATGCTTTATTACTTTGTTTTCG 57.876 29.630 1.96 0.00 40.48 3.46
5908 11012 4.286297 AGCCTGTATGCTTGTCAAGTTA 57.714 40.909 14.03 4.52 38.85 2.24
5936 11040 4.774124 CTCTCATGGTTTGAATAGGCTCA 58.226 43.478 0.00 0.00 32.78 4.26
6042 11363 2.841442 AAGCCTATAGCCGTCCAATC 57.159 50.000 0.00 0.00 45.47 2.67
6189 11510 0.980423 TGGATCGACCATCAACACCA 59.020 50.000 3.02 0.00 44.64 4.17
6224 11545 2.045438 TCGTCCGCCATTGCCATT 60.045 55.556 0.00 0.00 0.00 3.16
6226 11547 1.226660 CGTCCGCCATTGCCATTTC 60.227 57.895 0.00 0.00 0.00 2.17
6230 11551 1.590665 CGCCATTGCCATTTCCACA 59.409 52.632 0.00 0.00 0.00 4.17
6234 11555 2.690786 CCATTGCCATTTCCACAAGTG 58.309 47.619 0.00 0.00 0.00 3.16
6279 11600 3.278574 CAACCTTGTCAGAACAACAGGA 58.721 45.455 3.85 0.00 40.45 3.86
6285 11606 3.286629 TGTCAGAACAACAGGAGCTCCT 61.287 50.000 30.40 30.40 38.71 3.69
6286 11607 2.563179 GTCAGAACAACAGGAGCTCCTA 59.437 50.000 34.67 13.57 46.65 2.94
6287 11608 2.563179 TCAGAACAACAGGAGCTCCTAC 59.437 50.000 34.67 19.62 46.65 3.18
6288 11609 2.300152 CAGAACAACAGGAGCTCCTACA 59.700 50.000 34.67 0.00 46.65 2.74
6289 11610 2.972713 AGAACAACAGGAGCTCCTACAA 59.027 45.455 34.67 0.00 46.65 2.41
6290 11611 3.007398 AGAACAACAGGAGCTCCTACAAG 59.993 47.826 34.67 23.82 46.65 3.16
6291 11612 2.330216 ACAACAGGAGCTCCTACAAGT 58.670 47.619 34.67 24.51 46.65 3.16
6292 11613 2.300437 ACAACAGGAGCTCCTACAAGTC 59.700 50.000 34.67 4.45 46.65 3.01
6293 11614 2.300152 CAACAGGAGCTCCTACAAGTCA 59.700 50.000 34.67 0.00 46.65 3.41
6305 11626 0.036952 ACAAGTCACATGCCTCGAGG 60.037 55.000 27.83 27.83 38.53 4.63
6336 11657 2.514824 GGCCATGGAGTTCCGAGC 60.515 66.667 18.40 0.00 39.43 5.03
6388 11709 3.133464 CATGGGCGCATTCCACGT 61.133 61.111 14.46 0.00 37.08 4.49
6414 11741 0.452184 CAAATCAGAGGCAGCAGCAG 59.548 55.000 2.65 0.00 44.61 4.24
6415 11742 1.313812 AAATCAGAGGCAGCAGCAGC 61.314 55.000 2.65 0.00 44.61 5.25
6416 11743 2.479820 AATCAGAGGCAGCAGCAGCA 62.480 55.000 12.41 0.00 45.49 4.41
6436 11763 1.064906 AGCATGCCACATCTGTAAGCT 60.065 47.619 15.66 0.00 0.00 3.74
6456 11783 0.441533 CGCAGTCTTCACATGCAGTC 59.558 55.000 0.00 0.00 39.97 3.51
6519 11846 1.156736 CAACTCACCATGGTTCGTCC 58.843 55.000 16.84 0.00 0.00 4.79
6615 11942 2.369001 GGGTAGGGGAGCCTGACT 59.631 66.667 0.00 0.00 42.96 3.41
6657 11984 2.083774 TCATTCGGCTCCATGTTTGTC 58.916 47.619 0.00 0.00 0.00 3.18
6673 12000 2.048603 GTCCACCGCCGTAGTACCT 61.049 63.158 0.00 0.00 0.00 3.08
6674 12001 0.748005 GTCCACCGCCGTAGTACCTA 60.748 60.000 0.00 0.00 0.00 3.08
6675 12002 0.183492 TCCACCGCCGTAGTACCTAT 59.817 55.000 0.00 0.00 0.00 2.57
6676 12003 0.595095 CCACCGCCGTAGTACCTATC 59.405 60.000 0.00 0.00 0.00 2.08
6677 12004 0.595095 CACCGCCGTAGTACCTATCC 59.405 60.000 0.00 0.00 0.00 2.59
6713 12041 3.586892 GTCCTACCTTCTGTTGCTGTAC 58.413 50.000 0.00 0.00 0.00 2.90
6747 12075 5.179368 CACCAGGTGTTAAGAATGTGTACTG 59.821 44.000 11.99 0.00 0.00 2.74
6748 12076 5.163237 ACCAGGTGTTAAGAATGTGTACTGT 60.163 40.000 0.00 0.00 0.00 3.55
6751 12079 7.132213 CAGGTGTTAAGAATGTGTACTGTTTG 58.868 38.462 0.00 0.00 0.00 2.93
6752 12080 6.826741 AGGTGTTAAGAATGTGTACTGTTTGT 59.173 34.615 0.00 0.00 0.00 2.83
6753 12081 7.012044 AGGTGTTAAGAATGTGTACTGTTTGTC 59.988 37.037 0.00 0.00 0.00 3.18
6755 12083 7.012044 GTGTTAAGAATGTGTACTGTTTGTCCT 59.988 37.037 0.00 0.00 0.00 3.85
6756 12084 7.225931 TGTTAAGAATGTGTACTGTTTGTCCTC 59.774 37.037 0.00 0.00 0.00 3.71
6758 12086 5.542779 AGAATGTGTACTGTTTGTCCTCTC 58.457 41.667 0.00 0.00 0.00 3.20
6759 12087 3.746045 TGTGTACTGTTTGTCCTCTCC 57.254 47.619 0.00 0.00 0.00 3.71
6760 12088 3.035363 TGTGTACTGTTTGTCCTCTCCA 58.965 45.455 0.00 0.00 0.00 3.86
6761 12089 3.646162 TGTGTACTGTTTGTCCTCTCCAT 59.354 43.478 0.00 0.00 0.00 3.41
6762 12090 3.997021 GTGTACTGTTTGTCCTCTCCATG 59.003 47.826 0.00 0.00 0.00 3.66
6775 12103 6.069088 TGTCCTCTCCATGTTAATTATGGGTT 60.069 38.462 16.97 0.00 44.18 4.11
6786 12114 8.681486 TGTTAATTATGGGTTCTCATCTCATG 57.319 34.615 0.00 0.00 0.00 3.07
6853 12182 5.747565 ACGGCATTGATAAATTGATACACG 58.252 37.500 0.00 0.00 0.00 4.49
6866 12195 2.093181 TGATACACGAATGACCCAAGGG 60.093 50.000 2.91 2.91 42.03 3.95
6899 12228 0.956633 ACACAACAGAGCAAGCCATG 59.043 50.000 0.00 0.00 0.00 3.66
6981 12316 9.797473 GTTTTACATAAATTCTTTTGCTGCTTC 57.203 29.630 0.00 0.00 0.00 3.86
6983 12318 8.746922 TTACATAAATTCTTTTGCTGCTTCTG 57.253 30.769 0.00 0.00 0.00 3.02
7016 12351 6.385649 TGATGTTTTCGCTTCTAAAAGGTT 57.614 33.333 0.00 0.00 32.79 3.50
7114 12456 6.884096 TTGTTTTACTTGTTTCATGCACTG 57.116 33.333 0.00 0.00 0.00 3.66
7115 12457 5.960113 TGTTTTACTTGTTTCATGCACTGT 58.040 33.333 0.00 0.00 0.00 3.55
7116 12458 6.033341 TGTTTTACTTGTTTCATGCACTGTC 58.967 36.000 0.00 0.00 0.00 3.51
7117 12459 6.127758 TGTTTTACTTGTTTCATGCACTGTCT 60.128 34.615 0.00 0.00 0.00 3.41
7118 12460 6.449635 TTTACTTGTTTCATGCACTGTCTT 57.550 33.333 0.00 0.00 0.00 3.01
7119 12461 4.989279 ACTTGTTTCATGCACTGTCTTT 57.011 36.364 0.00 0.00 0.00 2.52
7120 12462 5.329035 ACTTGTTTCATGCACTGTCTTTT 57.671 34.783 0.00 0.00 0.00 2.27
7121 12463 5.723295 ACTTGTTTCATGCACTGTCTTTTT 58.277 33.333 0.00 0.00 0.00 1.94
7148 12490 8.786826 TTCGAGAAATGTGTAATTAGGATTGT 57.213 30.769 0.00 0.00 0.00 2.71
7149 12491 8.420374 TCGAGAAATGTGTAATTAGGATTGTC 57.580 34.615 0.00 0.00 0.00 3.18
7150 12492 8.258007 TCGAGAAATGTGTAATTAGGATTGTCT 58.742 33.333 0.00 0.00 0.00 3.41
7151 12493 8.883731 CGAGAAATGTGTAATTAGGATTGTCTT 58.116 33.333 0.00 0.00 0.00 3.01
7165 12507 9.667107 TTAGGATTGTCTTTTGTATTGACTAGG 57.333 33.333 0.00 0.00 0.00 3.02
7166 12508 7.690256 AGGATTGTCTTTTGTATTGACTAGGT 58.310 34.615 0.00 0.00 0.00 3.08
7167 12509 7.607991 AGGATTGTCTTTTGTATTGACTAGGTG 59.392 37.037 0.00 0.00 0.00 4.00
7168 12510 7.390718 GGATTGTCTTTTGTATTGACTAGGTGT 59.609 37.037 0.00 0.00 0.00 4.16
7169 12511 9.431887 GATTGTCTTTTGTATTGACTAGGTGTA 57.568 33.333 0.00 0.00 0.00 2.90
7170 12512 8.597662 TTGTCTTTTGTATTGACTAGGTGTAC 57.402 34.615 0.00 0.00 0.00 2.90
7171 12513 7.959175 TGTCTTTTGTATTGACTAGGTGTACT 58.041 34.615 0.00 0.00 0.00 2.73
7172 12514 7.870954 TGTCTTTTGTATTGACTAGGTGTACTG 59.129 37.037 0.00 0.00 0.00 2.74
7173 12515 8.086522 GTCTTTTGTATTGACTAGGTGTACTGA 58.913 37.037 0.00 0.00 0.00 3.41
7174 12516 8.086522 TCTTTTGTATTGACTAGGTGTACTGAC 58.913 37.037 0.00 0.00 0.00 3.51
7175 12517 5.909621 TGTATTGACTAGGTGTACTGACC 57.090 43.478 0.00 0.00 36.09 4.02
7176 12518 5.326900 TGTATTGACTAGGTGTACTGACCA 58.673 41.667 5.26 0.00 38.63 4.02
7177 12519 5.776208 TGTATTGACTAGGTGTACTGACCAA 59.224 40.000 5.26 0.00 38.63 3.67
7178 12520 5.818678 ATTGACTAGGTGTACTGACCAAA 57.181 39.130 5.26 0.00 38.63 3.28
7179 12521 4.866508 TGACTAGGTGTACTGACCAAAG 57.133 45.455 5.26 4.68 38.63 2.77
7180 12522 3.006537 TGACTAGGTGTACTGACCAAAGC 59.993 47.826 5.26 0.99 38.63 3.51
7181 12523 2.302157 ACTAGGTGTACTGACCAAAGCC 59.698 50.000 5.26 0.00 38.63 4.35
7182 12524 1.136828 AGGTGTACTGACCAAAGCCA 58.863 50.000 5.26 0.00 38.63 4.75
7183 12525 1.705186 AGGTGTACTGACCAAAGCCAT 59.295 47.619 5.26 0.00 38.63 4.40
7184 12526 2.108250 AGGTGTACTGACCAAAGCCATT 59.892 45.455 5.26 0.00 38.63 3.16
7185 12527 2.890945 GGTGTACTGACCAAAGCCATTT 59.109 45.455 0.00 0.00 35.88 2.32
7186 12528 3.320826 GGTGTACTGACCAAAGCCATTTT 59.679 43.478 0.00 0.00 35.88 1.82
7187 12529 4.521256 GGTGTACTGACCAAAGCCATTTTA 59.479 41.667 0.00 0.00 35.88 1.52
7188 12530 5.185056 GGTGTACTGACCAAAGCCATTTTAT 59.815 40.000 0.00 0.00 35.88 1.40
7189 12531 6.376018 GGTGTACTGACCAAAGCCATTTTATA 59.624 38.462 0.00 0.00 35.88 0.98
7190 12532 7.094118 GGTGTACTGACCAAAGCCATTTTATAA 60.094 37.037 0.00 0.00 35.88 0.98
7191 12533 8.301002 GTGTACTGACCAAAGCCATTTTATAAA 58.699 33.333 0.00 0.00 0.00 1.40
7192 12534 8.301002 TGTACTGACCAAAGCCATTTTATAAAC 58.699 33.333 0.00 0.00 0.00 2.01
7193 12535 7.539034 ACTGACCAAAGCCATTTTATAAACT 57.461 32.000 0.00 0.00 0.00 2.66
7194 12536 7.378181 ACTGACCAAAGCCATTTTATAAACTG 58.622 34.615 8.25 8.25 0.00 3.16
7195 12537 7.015195 ACTGACCAAAGCCATTTTATAAACTGT 59.985 33.333 12.86 0.00 0.00 3.55
7196 12538 8.410673 TGACCAAAGCCATTTTATAAACTGTA 57.589 30.769 12.86 0.00 0.00 2.74
7197 12539 8.861086 TGACCAAAGCCATTTTATAAACTGTAA 58.139 29.630 12.86 0.00 0.00 2.41
7198 12540 9.353999 GACCAAAGCCATTTTATAAACTGTAAG 57.646 33.333 12.86 1.84 42.29 2.34
7199 12541 9.084533 ACCAAAGCCATTTTATAAACTGTAAGA 57.915 29.630 12.86 0.00 37.43 2.10
7215 12557 9.561069 AAACTGTAAGATCAATGTTGTAGAACT 57.439 29.630 4.21 0.00 37.43 3.01
7216 12558 8.764524 ACTGTAAGATCAATGTTGTAGAACTC 57.235 34.615 4.21 0.00 37.43 3.01
7217 12559 8.367911 ACTGTAAGATCAATGTTGTAGAACTCA 58.632 33.333 4.21 0.00 37.43 3.41
7218 12560 9.208022 CTGTAAGATCAATGTTGTAGAACTCAA 57.792 33.333 4.21 0.00 34.07 3.02
7219 12561 9.554395 TGTAAGATCAATGTTGTAGAACTCAAA 57.446 29.630 4.21 0.00 32.79 2.69
7220 12562 9.813080 GTAAGATCAATGTTGTAGAACTCAAAC 57.187 33.333 4.21 0.00 32.79 2.93
7221 12563 8.682936 AAGATCAATGTTGTAGAACTCAAACT 57.317 30.769 4.21 0.00 32.79 2.66
7222 12564 8.092521 AGATCAATGTTGTAGAACTCAAACTG 57.907 34.615 4.21 0.00 32.79 3.16
7223 12565 7.933577 AGATCAATGTTGTAGAACTCAAACTGA 59.066 33.333 4.21 0.00 32.79 3.41
7224 12566 7.246674 TCAATGTTGTAGAACTCAAACTGAC 57.753 36.000 4.21 0.00 32.79 3.51
7225 12567 6.821160 TCAATGTTGTAGAACTCAAACTGACA 59.179 34.615 4.21 0.00 32.79 3.58
7226 12568 6.604735 ATGTTGTAGAACTCAAACTGACAC 57.395 37.500 4.21 0.00 32.79 3.67
7227 12569 5.730550 TGTTGTAGAACTCAAACTGACACT 58.269 37.500 4.21 0.00 32.79 3.55
7228 12570 5.810587 TGTTGTAGAACTCAAACTGACACTC 59.189 40.000 4.21 0.00 32.79 3.51
7229 12571 5.592104 TGTAGAACTCAAACTGACACTCA 57.408 39.130 0.00 0.00 0.00 3.41
7230 12572 5.348986 TGTAGAACTCAAACTGACACTCAC 58.651 41.667 0.00 0.00 0.00 3.51
7231 12573 3.798202 AGAACTCAAACTGACACTCACC 58.202 45.455 0.00 0.00 0.00 4.02
7232 12574 2.622064 ACTCAAACTGACACTCACCC 57.378 50.000 0.00 0.00 0.00 4.61
7233 12575 1.837439 ACTCAAACTGACACTCACCCA 59.163 47.619 0.00 0.00 0.00 4.51
7234 12576 2.238646 ACTCAAACTGACACTCACCCAA 59.761 45.455 0.00 0.00 0.00 4.12
7235 12577 3.117888 ACTCAAACTGACACTCACCCAAT 60.118 43.478 0.00 0.00 0.00 3.16
7236 12578 4.102524 ACTCAAACTGACACTCACCCAATA 59.897 41.667 0.00 0.00 0.00 1.90
7237 12579 4.641396 TCAAACTGACACTCACCCAATAG 58.359 43.478 0.00 0.00 0.00 1.73
7238 12580 3.703001 AACTGACACTCACCCAATAGG 57.297 47.619 0.00 0.00 43.78 2.57
7252 12594 4.236527 CCAATAGGGTAACAAAGCTCCT 57.763 45.455 0.00 0.00 39.74 3.69
7253 12595 5.367945 CCAATAGGGTAACAAAGCTCCTA 57.632 43.478 0.00 0.00 39.74 2.94
7254 12596 5.941788 CCAATAGGGTAACAAAGCTCCTAT 58.058 41.667 2.76 2.76 41.15 2.57
7255 12597 5.998363 CCAATAGGGTAACAAAGCTCCTATC 59.002 44.000 8.01 0.00 39.20 2.08
7256 12598 6.183361 CCAATAGGGTAACAAAGCTCCTATCT 60.183 42.308 8.01 0.00 39.20 1.98
7257 12599 6.673839 ATAGGGTAACAAAGCTCCTATCTC 57.326 41.667 2.76 0.00 36.40 2.75
7258 12600 4.625963 AGGGTAACAAAGCTCCTATCTCT 58.374 43.478 0.00 0.00 39.74 3.10
7259 12601 4.651962 AGGGTAACAAAGCTCCTATCTCTC 59.348 45.833 0.00 0.00 39.74 3.20
7260 12602 4.406003 GGGTAACAAAGCTCCTATCTCTCA 59.594 45.833 0.00 0.00 39.74 3.27
7261 12603 5.104900 GGGTAACAAAGCTCCTATCTCTCAA 60.105 44.000 0.00 0.00 39.74 3.02
7262 12604 6.408662 GGGTAACAAAGCTCCTATCTCTCAAT 60.409 42.308 0.00 0.00 39.74 2.57
7263 12605 6.704050 GGTAACAAAGCTCCTATCTCTCAATC 59.296 42.308 0.00 0.00 0.00 2.67
7264 12606 4.942852 ACAAAGCTCCTATCTCTCAATCG 58.057 43.478 0.00 0.00 0.00 3.34
7265 12607 4.646945 ACAAAGCTCCTATCTCTCAATCGA 59.353 41.667 0.00 0.00 0.00 3.59
7266 12608 4.846779 AAGCTCCTATCTCTCAATCGAC 57.153 45.455 0.00 0.00 0.00 4.20
7267 12609 3.153919 AGCTCCTATCTCTCAATCGACC 58.846 50.000 0.00 0.00 0.00 4.79
7268 12610 2.095466 GCTCCTATCTCTCAATCGACCG 60.095 54.545 0.00 0.00 0.00 4.79
7269 12611 3.403968 CTCCTATCTCTCAATCGACCGA 58.596 50.000 0.00 0.00 0.00 4.69
7270 12612 3.403968 TCCTATCTCTCAATCGACCGAG 58.596 50.000 6.59 6.59 0.00 4.63
7271 12613 3.071167 TCCTATCTCTCAATCGACCGAGA 59.929 47.826 13.42 13.42 36.99 4.04
7272 12614 3.815962 CCTATCTCTCAATCGACCGAGAA 59.184 47.826 14.62 8.05 37.80 2.87
7273 12615 4.457603 CCTATCTCTCAATCGACCGAGAAT 59.542 45.833 14.62 12.87 37.80 2.40
7274 12616 4.927978 ATCTCTCAATCGACCGAGAATT 57.072 40.909 14.62 4.86 37.80 2.17
7275 12617 6.149640 CCTATCTCTCAATCGACCGAGAATTA 59.850 42.308 14.62 9.35 37.80 1.40
7276 12618 5.830000 TCTCTCAATCGACCGAGAATTAA 57.170 39.130 14.62 1.74 37.80 1.40
7277 12619 5.579718 TCTCTCAATCGACCGAGAATTAAC 58.420 41.667 14.62 0.00 37.80 2.01
7278 12620 5.124936 TCTCTCAATCGACCGAGAATTAACA 59.875 40.000 14.62 0.00 37.80 2.41
7279 12621 5.902681 TCTCAATCGACCGAGAATTAACAT 58.097 37.500 12.07 0.00 35.37 2.71
7280 12622 6.338146 TCTCAATCGACCGAGAATTAACATT 58.662 36.000 12.07 0.00 35.37 2.71
7281 12623 6.475727 TCTCAATCGACCGAGAATTAACATTC 59.524 38.462 12.07 0.00 39.45 2.67
7282 12624 5.522460 TCAATCGACCGAGAATTAACATTCC 59.478 40.000 0.00 0.00 39.95 3.01
7283 12625 4.730949 TCGACCGAGAATTAACATTCCT 57.269 40.909 0.00 0.00 39.95 3.36
7284 12626 5.840243 TCGACCGAGAATTAACATTCCTA 57.160 39.130 0.00 0.00 39.95 2.94
7285 12627 5.828747 TCGACCGAGAATTAACATTCCTAG 58.171 41.667 0.00 0.00 39.95 3.02
7286 12628 5.359009 TCGACCGAGAATTAACATTCCTAGT 59.641 40.000 0.00 0.00 39.95 2.57
7287 12629 5.686397 CGACCGAGAATTAACATTCCTAGTC 59.314 44.000 0.00 0.00 39.95 2.59
7288 12630 6.540438 ACCGAGAATTAACATTCCTAGTCA 57.460 37.500 0.00 0.00 39.95 3.41
7289 12631 7.125792 ACCGAGAATTAACATTCCTAGTCAT 57.874 36.000 0.00 0.00 39.95 3.06
7290 12632 7.565680 ACCGAGAATTAACATTCCTAGTCATT 58.434 34.615 0.00 0.00 39.95 2.57
7291 12633 8.047310 ACCGAGAATTAACATTCCTAGTCATTT 58.953 33.333 0.00 0.00 39.95 2.32
7292 12634 8.893727 CCGAGAATTAACATTCCTAGTCATTTT 58.106 33.333 0.00 0.00 39.95 1.82
7336 12678 7.982761 ATTGAAAATATGTTTGCCATGTTGT 57.017 28.000 0.00 0.00 35.34 3.32
7337 12679 6.782298 TGAAAATATGTTTGCCATGTTGTG 57.218 33.333 0.00 0.00 35.34 3.33
7338 12680 6.519382 TGAAAATATGTTTGCCATGTTGTGA 58.481 32.000 0.00 0.00 35.34 3.58
7339 12681 6.988580 TGAAAATATGTTTGCCATGTTGTGAA 59.011 30.769 0.00 0.00 35.34 3.18
7340 12682 7.496920 TGAAAATATGTTTGCCATGTTGTGAAA 59.503 29.630 0.00 0.00 35.34 2.69
7341 12683 7.798596 AAATATGTTTGCCATGTTGTGAAAA 57.201 28.000 0.00 0.00 35.34 2.29
7342 12684 7.982761 AATATGTTTGCCATGTTGTGAAAAT 57.017 28.000 0.00 0.00 34.04 1.82
7343 12685 5.927954 ATGTTTGCCATGTTGTGAAAATC 57.072 34.783 0.00 0.00 30.69 2.17
7344 12686 5.021033 TGTTTGCCATGTTGTGAAAATCT 57.979 34.783 0.00 0.00 0.00 2.40
7345 12687 6.154203 TGTTTGCCATGTTGTGAAAATCTA 57.846 33.333 0.00 0.00 0.00 1.98
7346 12688 6.215121 TGTTTGCCATGTTGTGAAAATCTAG 58.785 36.000 0.00 0.00 0.00 2.43
7347 12689 6.183360 TGTTTGCCATGTTGTGAAAATCTAGT 60.183 34.615 0.00 0.00 0.00 2.57
7348 12690 7.013750 TGTTTGCCATGTTGTGAAAATCTAGTA 59.986 33.333 0.00 0.00 0.00 1.82
7349 12691 7.701539 TTGCCATGTTGTGAAAATCTAGTAT 57.298 32.000 0.00 0.00 0.00 2.12
7350 12692 7.701539 TGCCATGTTGTGAAAATCTAGTATT 57.298 32.000 0.00 0.00 0.00 1.89
7351 12693 8.121305 TGCCATGTTGTGAAAATCTAGTATTT 57.879 30.769 0.00 0.00 0.00 1.40
7352 12694 9.237187 TGCCATGTTGTGAAAATCTAGTATTTA 57.763 29.630 0.00 0.00 0.00 1.40
7401 12743 5.682943 TTTCTCTAAAACCATGTTCACCG 57.317 39.130 0.00 0.00 0.00 4.94
7402 12744 4.345859 TCTCTAAAACCATGTTCACCGT 57.654 40.909 0.00 0.00 0.00 4.83
7403 12745 4.062293 TCTCTAAAACCATGTTCACCGTG 58.938 43.478 0.00 0.00 0.00 4.94
7404 12746 4.062293 CTCTAAAACCATGTTCACCGTGA 58.938 43.478 0.00 0.00 31.20 4.35
7405 12747 3.810941 TCTAAAACCATGTTCACCGTGAC 59.189 43.478 0.00 0.00 31.20 3.67
7406 12748 0.941542 AAACCATGTTCACCGTGACG 59.058 50.000 0.00 0.00 31.20 4.35
7407 12749 0.179067 AACCATGTTCACCGTGACGT 60.179 50.000 3.64 0.00 31.20 4.34
7408 12750 0.675083 ACCATGTTCACCGTGACGTA 59.325 50.000 3.64 0.00 31.20 3.57
7409 12751 1.068895 ACCATGTTCACCGTGACGTAA 59.931 47.619 3.64 0.00 31.20 3.18
7410 12752 1.458064 CCATGTTCACCGTGACGTAAC 59.542 52.381 3.64 6.22 31.20 2.50
7411 12753 1.458064 CATGTTCACCGTGACGTAACC 59.542 52.381 3.64 0.00 31.20 2.85
7412 12754 0.746063 TGTTCACCGTGACGTAACCT 59.254 50.000 3.64 0.00 0.00 3.50
7413 12755 1.952990 TGTTCACCGTGACGTAACCTA 59.047 47.619 3.64 0.00 0.00 3.08
7414 12756 2.557924 TGTTCACCGTGACGTAACCTAT 59.442 45.455 3.64 0.00 0.00 2.57
7415 12757 3.005684 TGTTCACCGTGACGTAACCTATT 59.994 43.478 3.64 0.00 0.00 1.73
7416 12758 3.492421 TCACCGTGACGTAACCTATTC 57.508 47.619 3.64 0.00 0.00 1.75
7417 12759 2.819019 TCACCGTGACGTAACCTATTCA 59.181 45.455 3.64 0.00 0.00 2.57
7418 12760 3.444742 TCACCGTGACGTAACCTATTCAT 59.555 43.478 3.64 0.00 0.00 2.57
7419 12761 3.795101 CACCGTGACGTAACCTATTCATC 59.205 47.826 3.64 0.00 0.00 2.92
7420 12762 3.698040 ACCGTGACGTAACCTATTCATCT 59.302 43.478 3.64 0.00 0.00 2.90
7421 12763 4.883585 ACCGTGACGTAACCTATTCATCTA 59.116 41.667 3.64 0.00 0.00 1.98
7422 12764 5.008415 ACCGTGACGTAACCTATTCATCTAG 59.992 44.000 3.64 0.00 0.00 2.43
7423 12765 4.910456 CGTGACGTAACCTATTCATCTAGC 59.090 45.833 0.00 0.00 0.00 3.42
7424 12766 4.910456 GTGACGTAACCTATTCATCTAGCG 59.090 45.833 0.00 0.00 0.00 4.26
7425 12767 3.898529 ACGTAACCTATTCATCTAGCGC 58.101 45.455 0.00 0.00 0.00 5.92
7426 12768 3.317149 ACGTAACCTATTCATCTAGCGCA 59.683 43.478 11.47 0.00 0.00 6.09
7427 12769 4.202080 ACGTAACCTATTCATCTAGCGCAA 60.202 41.667 11.47 0.00 0.00 4.85
7428 12770 4.383052 CGTAACCTATTCATCTAGCGCAAG 59.617 45.833 11.47 0.00 43.44 4.01
7429 12771 4.672587 AACCTATTCATCTAGCGCAAGA 57.327 40.909 11.47 0.00 43.02 3.02
7430 12772 4.672587 ACCTATTCATCTAGCGCAAGAA 57.327 40.909 11.47 6.31 43.02 2.52
7431 12773 5.023533 ACCTATTCATCTAGCGCAAGAAA 57.976 39.130 11.47 0.00 43.02 2.52
7432 12774 5.615289 ACCTATTCATCTAGCGCAAGAAAT 58.385 37.500 11.47 4.12 43.02 2.17
7433 12775 5.468072 ACCTATTCATCTAGCGCAAGAAATG 59.532 40.000 11.47 6.05 43.02 2.32
7434 12776 5.698089 CCTATTCATCTAGCGCAAGAAATGA 59.302 40.000 11.47 8.47 43.02 2.57
7435 12777 4.864916 TTCATCTAGCGCAAGAAATGAC 57.135 40.909 11.47 0.00 43.02 3.06
7436 12778 4.128925 TCATCTAGCGCAAGAAATGACT 57.871 40.909 11.47 0.00 43.02 3.41
7437 12779 5.262588 TCATCTAGCGCAAGAAATGACTA 57.737 39.130 11.47 0.00 43.02 2.59
7438 12780 5.284864 TCATCTAGCGCAAGAAATGACTAG 58.715 41.667 11.47 0.00 38.08 2.57
7439 12781 4.720649 TCTAGCGCAAGAAATGACTAGT 57.279 40.909 11.47 0.00 38.00 2.57
7440 12782 4.424626 TCTAGCGCAAGAAATGACTAGTG 58.575 43.478 11.47 0.00 38.00 2.74
7441 12783 3.045601 AGCGCAAGAAATGACTAGTGT 57.954 42.857 11.47 0.00 43.02 3.55
7442 12784 3.403038 AGCGCAAGAAATGACTAGTGTT 58.597 40.909 11.47 0.00 43.02 3.32
7443 12785 3.815401 AGCGCAAGAAATGACTAGTGTTT 59.185 39.130 11.47 0.84 43.02 2.83
7444 12786 4.275936 AGCGCAAGAAATGACTAGTGTTTT 59.724 37.500 11.47 0.00 43.02 2.43
7445 12787 4.613031 GCGCAAGAAATGACTAGTGTTTTC 59.387 41.667 0.30 9.38 43.02 2.29
7446 12788 5.560953 GCGCAAGAAATGACTAGTGTTTTCT 60.561 40.000 17.80 17.80 35.79 2.52
7447 12789 6.074005 CGCAAGAAATGACTAGTGTTTTCTC 58.926 40.000 21.32 13.43 34.19 2.87
7448 12790 6.073548 CGCAAGAAATGACTAGTGTTTTCTCT 60.074 38.462 21.32 13.27 34.19 3.10
7449 12791 7.519008 CGCAAGAAATGACTAGTGTTTTCTCTT 60.519 37.037 21.32 11.11 34.19 2.85
7450 12792 8.774586 GCAAGAAATGACTAGTGTTTTCTCTTA 58.225 33.333 21.32 0.00 34.19 2.10
7490 12832 9.570468 AATATAATCTTGCACTGATCTCAATGT 57.430 29.630 2.34 0.00 0.00 2.71
7491 12833 5.814764 AATCTTGCACTGATCTCAATGTC 57.185 39.130 2.34 0.00 0.00 3.06
7492 12834 4.276058 TCTTGCACTGATCTCAATGTCA 57.724 40.909 0.00 0.00 0.00 3.58
7493 12835 4.644498 TCTTGCACTGATCTCAATGTCAA 58.356 39.130 0.00 0.00 0.00 3.18
7494 12836 5.065235 TCTTGCACTGATCTCAATGTCAAA 58.935 37.500 0.00 0.00 0.00 2.69
7495 12837 5.708697 TCTTGCACTGATCTCAATGTCAAAT 59.291 36.000 0.00 0.00 0.00 2.32
7496 12838 5.556355 TGCACTGATCTCAATGTCAAATC 57.444 39.130 0.00 0.00 0.00 2.17
7497 12839 4.093850 TGCACTGATCTCAATGTCAAATCG 59.906 41.667 0.00 0.00 0.00 3.34
7498 12840 4.330894 GCACTGATCTCAATGTCAAATCGA 59.669 41.667 0.00 0.00 0.00 3.59
7499 12841 5.007430 GCACTGATCTCAATGTCAAATCGAT 59.993 40.000 0.00 0.00 0.00 3.59
7500 12842 6.419771 CACTGATCTCAATGTCAAATCGATG 58.580 40.000 0.00 0.00 0.00 3.84
7501 12843 5.526479 ACTGATCTCAATGTCAAATCGATGG 59.474 40.000 0.00 0.00 0.00 3.51
7502 12844 4.274214 TGATCTCAATGTCAAATCGATGGC 59.726 41.667 0.00 0.00 0.00 4.40
7503 12845 3.877559 TCTCAATGTCAAATCGATGGCT 58.122 40.909 0.00 0.00 0.00 4.75
7504 12846 4.264253 TCTCAATGTCAAATCGATGGCTT 58.736 39.130 0.00 0.00 0.00 4.35
7505 12847 4.701651 TCTCAATGTCAAATCGATGGCTTT 59.298 37.500 0.00 0.00 0.00 3.51
7506 12848 4.985413 TCAATGTCAAATCGATGGCTTTC 58.015 39.130 0.00 0.00 0.00 2.62
7507 12849 3.680642 ATGTCAAATCGATGGCTTTCG 57.319 42.857 0.00 4.38 40.46 3.46
7515 12857 3.079960 TCGATGGCTTTCGATGTAGAC 57.920 47.619 8.65 0.00 42.81 2.59
7516 12858 2.688446 TCGATGGCTTTCGATGTAGACT 59.312 45.455 8.65 0.00 42.81 3.24
7517 12859 3.881089 TCGATGGCTTTCGATGTAGACTA 59.119 43.478 8.65 0.00 42.81 2.59
7518 12860 4.337274 TCGATGGCTTTCGATGTAGACTAA 59.663 41.667 8.65 0.00 42.81 2.24
7519 12861 4.677378 CGATGGCTTTCGATGTAGACTAAG 59.323 45.833 4.72 0.00 41.62 2.18
7520 12862 5.505819 CGATGGCTTTCGATGTAGACTAAGA 60.506 44.000 4.72 0.00 41.62 2.10
7521 12863 5.854010 TGGCTTTCGATGTAGACTAAGAT 57.146 39.130 0.00 0.00 0.00 2.40
7522 12864 6.222038 TGGCTTTCGATGTAGACTAAGATT 57.778 37.500 0.00 0.00 0.00 2.40
7523 12865 6.640518 TGGCTTTCGATGTAGACTAAGATTT 58.359 36.000 0.00 0.00 0.00 2.17
7524 12866 7.778083 TGGCTTTCGATGTAGACTAAGATTTA 58.222 34.615 0.00 0.00 0.00 1.40
7525 12867 8.255206 TGGCTTTCGATGTAGACTAAGATTTAA 58.745 33.333 0.00 0.00 0.00 1.52
7526 12868 8.541312 GGCTTTCGATGTAGACTAAGATTTAAC 58.459 37.037 0.00 0.00 0.00 2.01
7527 12869 9.303537 GCTTTCGATGTAGACTAAGATTTAACT 57.696 33.333 0.00 0.00 0.00 2.24
7555 12897 4.191544 TCAAGGGAATGAGAATTAGCACG 58.808 43.478 0.00 0.00 0.00 5.34
7556 12898 4.081142 TCAAGGGAATGAGAATTAGCACGA 60.081 41.667 0.00 0.00 0.00 4.35
7557 12899 4.065321 AGGGAATGAGAATTAGCACGAG 57.935 45.455 0.00 0.00 0.00 4.18
7558 12900 3.706594 AGGGAATGAGAATTAGCACGAGA 59.293 43.478 0.00 0.00 0.00 4.04
7559 12901 4.346418 AGGGAATGAGAATTAGCACGAGAT 59.654 41.667 0.00 0.00 0.00 2.75
7560 12902 5.540337 AGGGAATGAGAATTAGCACGAGATA 59.460 40.000 0.00 0.00 0.00 1.98
7561 12903 6.042093 AGGGAATGAGAATTAGCACGAGATAA 59.958 38.462 0.00 0.00 0.00 1.75
7562 12904 6.367422 GGGAATGAGAATTAGCACGAGATAAG 59.633 42.308 0.00 0.00 0.00 1.73
7563 12905 7.148641 GGAATGAGAATTAGCACGAGATAAGA 58.851 38.462 0.00 0.00 0.00 2.10
7564 12906 7.653713 GGAATGAGAATTAGCACGAGATAAGAA 59.346 37.037 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.593653 ACTACCTCTATAGTGGGAAGTAACAT 58.406 38.462 21.82 3.60 34.02 2.71
1 2 6.978261 ACTACCTCTATAGTGGGAAGTAACA 58.022 40.000 21.82 0.29 34.02 2.41
3 4 8.560039 TGTTACTACCTCTATAGTGGGAAGTAA 58.440 37.037 27.07 27.07 38.04 2.24
4 5 8.106017 TGTTACTACCTCTATAGTGGGAAGTA 57.894 38.462 21.82 22.01 36.09 2.24
5 6 6.978261 TGTTACTACCTCTATAGTGGGAAGT 58.022 40.000 23.48 23.48 36.09 3.01
6 7 9.233649 CTATGTTACTACCTCTATAGTGGGAAG 57.766 40.741 21.82 19.36 36.09 3.46
7 8 8.952602 TCTATGTTACTACCTCTATAGTGGGAA 58.047 37.037 21.82 10.70 36.09 3.97
8 9 8.381636 GTCTATGTTACTACCTCTATAGTGGGA 58.618 40.741 21.82 14.49 36.09 4.37
9 10 8.384718 AGTCTATGTTACTACCTCTATAGTGGG 58.615 40.741 21.82 16.23 36.09 4.61
10 11 9.796180 AAGTCTATGTTACTACCTCTATAGTGG 57.204 37.037 17.49 17.49 36.09 4.00
16 17 9.690913 TGCTAAAAGTCTATGTTACTACCTCTA 57.309 33.333 0.00 0.00 0.00 2.43
17 18 8.591114 TGCTAAAAGTCTATGTTACTACCTCT 57.409 34.615 0.00 0.00 0.00 3.69
20 21 9.178427 CGTATGCTAAAAGTCTATGTTACTACC 57.822 37.037 0.00 0.00 0.00 3.18
21 22 8.689069 GCGTATGCTAAAAGTCTATGTTACTAC 58.311 37.037 0.00 0.00 38.39 2.73
22 23 8.407832 TGCGTATGCTAAAAGTCTATGTTACTA 58.592 33.333 8.69 0.00 43.34 1.82
36 37 4.124238 GGGAGTAACATGCGTATGCTAAA 58.876 43.478 13.82 0.00 43.34 1.85
37 38 3.386726 AGGGAGTAACATGCGTATGCTAA 59.613 43.478 13.82 0.00 43.34 3.09
40 41 2.135933 GAGGGAGTAACATGCGTATGC 58.864 52.381 13.82 0.00 37.85 3.14
45 46 1.541233 GGATGGAGGGAGTAACATGCG 60.541 57.143 0.00 0.00 0.00 4.73
62 63 1.630878 GGAGGCCTGATAAATCCGGAT 59.369 52.381 12.00 12.38 33.52 4.18
63 64 1.056660 GGAGGCCTGATAAATCCGGA 58.943 55.000 12.00 6.61 33.52 5.14
64 65 1.059913 AGGAGGCCTGATAAATCCGG 58.940 55.000 12.00 0.00 35.13 5.14
65 66 2.938956 AAGGAGGCCTGATAAATCCG 57.061 50.000 12.00 0.00 35.13 4.18
66 67 6.015095 CCAAAATAAGGAGGCCTGATAAATCC 60.015 42.308 12.00 2.58 32.13 3.01
67 68 6.015095 CCCAAAATAAGGAGGCCTGATAAATC 60.015 42.308 12.00 0.00 32.13 2.17
71 72 3.436470 GCCCAAAATAAGGAGGCCTGATA 60.436 47.826 12.00 0.00 37.66 2.15
73 74 1.341976 GCCCAAAATAAGGAGGCCTGA 60.342 52.381 12.00 0.00 37.66 3.86
75 76 1.010795 AGCCCAAAATAAGGAGGCCT 58.989 50.000 3.86 3.86 45.00 5.19
76 77 2.748209 TAGCCCAAAATAAGGAGGCC 57.252 50.000 0.00 0.00 45.00 5.19
77 78 4.023980 ACTTTAGCCCAAAATAAGGAGGC 58.976 43.478 0.00 0.00 44.20 4.70
78 79 6.210584 TCAAACTTTAGCCCAAAATAAGGAGG 59.789 38.462 0.00 0.00 0.00 4.30
79 80 7.090808 GTCAAACTTTAGCCCAAAATAAGGAG 58.909 38.462 0.00 0.00 0.00 3.69
80 81 6.014925 GGTCAAACTTTAGCCCAAAATAAGGA 60.015 38.462 0.00 0.00 0.00 3.36
81 82 6.014584 AGGTCAAACTTTAGCCCAAAATAAGG 60.015 38.462 0.00 0.00 0.00 2.69
155 156 9.428097 GATTTGTATTTGAAAGAGCTTTCCAAT 57.572 29.630 19.60 19.60 46.15 3.16
158 159 7.378181 TGGATTTGTATTTGAAAGAGCTTTCC 58.622 34.615 17.57 5.25 46.15 3.13
217 218 6.660094 ACTTTGGGTCAGACTTAGACTACTAG 59.340 42.308 0.00 0.00 36.29 2.57
241 242 3.371702 GGGATTCTTGGTTCCCTTCCTAC 60.372 52.174 0.63 0.00 46.91 3.18
244 245 2.145397 GGGATTCTTGGTTCCCTTCC 57.855 55.000 0.63 0.00 46.91 3.46
252 253 1.915078 CTCTGGCCGGGATTCTTGGT 61.915 60.000 12.87 0.00 0.00 3.67
257 258 1.049289 ACTACCTCTGGCCGGGATTC 61.049 60.000 12.87 0.00 0.00 2.52
260 261 1.076485 GTACTACCTCTGGCCGGGA 60.076 63.158 12.87 4.76 0.00 5.14
266 267 8.485392 AGTAACTTAGACTAGTACTACCTCTGG 58.515 40.741 12.75 9.20 0.00 3.86
267 268 9.533253 GAGTAACTTAGACTAGTACTACCTCTG 57.467 40.741 12.75 1.34 0.00 3.35
268 269 8.704668 GGAGTAACTTAGACTAGTACTACCTCT 58.295 40.741 0.00 4.74 0.00 3.69
270 271 7.147391 GGGGAGTAACTTAGACTAGTACTACCT 60.147 44.444 16.95 4.06 35.40 3.08
275 277 7.894753 ATTGGGGAGTAACTTAGACTAGTAC 57.105 40.000 0.00 0.00 0.00 2.73
278 280 7.728981 TCCATATTGGGGAGTAACTTAGACTAG 59.271 40.741 0.00 0.00 38.32 2.57
349 3424 3.663995 TTGTATTCGTGTCCTTTCCGA 57.336 42.857 0.00 0.00 0.00 4.55
352 3427 3.120442 CCGGTTTGTATTCGTGTCCTTTC 60.120 47.826 0.00 0.00 0.00 2.62
367 3442 4.389576 GCGCAGTGAGCCGGTTTG 62.390 66.667 7.75 0.00 41.38 2.93
802 3912 7.110155 AGGGAAAATACAATAGAGAAGCGAAA 58.890 34.615 0.00 0.00 0.00 3.46
862 3974 1.713297 AGTAGGAACGAACACCCACT 58.287 50.000 0.00 0.00 0.00 4.00
993 4105 2.480587 CGGCGTCTGGTACATGTGAATA 60.481 50.000 9.11 0.00 38.20 1.75
1015 4127 3.849951 CGCTCCGCCTGGGTATGT 61.850 66.667 0.00 0.00 37.00 2.29
1047 4159 4.038162 AGAGGCGTATCCATCAAACTAGAC 59.962 45.833 0.00 0.00 37.29 2.59
1074 4186 1.623542 TAGCCGCCCTTCTTTCCTCC 61.624 60.000 0.00 0.00 0.00 4.30
1138 4250 0.684535 TCTGACTCGCCATGGTTCAA 59.315 50.000 14.67 0.00 0.00 2.69
1185 4297 5.532557 CAATCACTGCTTGATATCTCGGTA 58.467 41.667 3.98 0.00 44.86 4.02
1281 4393 2.478134 GGATATCACAGATGTCTTGCGC 59.522 50.000 0.00 0.00 0.00 6.09
1296 4408 1.547820 TGCTCGGATGCAGAGGATATC 59.452 52.381 3.87 0.00 38.12 1.63
1397 4509 1.338200 GGACTGTCTTGCCCTGTACAG 60.338 57.143 16.34 16.34 43.90 2.74
1528 4640 9.630098 CTTTAGCTTTGATTTCTTTGATAAGCA 57.370 29.630 0.00 0.00 39.06 3.91
2540 5657 5.006358 CGTTTACTCAATTCCTGGTATTCCG 59.994 44.000 0.00 0.00 36.30 4.30
2820 5937 1.616865 TCCAGAACAGGACTTACACCG 59.383 52.381 0.00 0.00 31.23 4.94
2984 6101 5.279708 CCTGAAGAGGCAGTTTCTTCTTCTA 60.280 44.000 13.36 3.79 46.78 2.10
3317 6435 1.464734 CTCTCTAGCTTCCGGTGACA 58.535 55.000 0.00 0.00 0.00 3.58
3396 6514 8.577296 GTGACATCAAGGTAGCATCTAGTAATA 58.423 37.037 0.00 0.00 0.00 0.98
3603 6723 7.545265 TCCAATGAGCTAAATGCATGTAAAAAC 59.455 33.333 0.00 0.00 45.94 2.43
3616 6736 5.635278 TCCATCATCTCCAATGAGCTAAA 57.365 39.130 0.00 0.00 38.58 1.85
3631 6751 6.619023 ACCTCTCTCCTCTTTTATTCCATCAT 59.381 38.462 0.00 0.00 0.00 2.45
3995 7115 5.485353 CCAGAGAATAAGCTATCCCATACCA 59.515 44.000 0.00 0.00 0.00 3.25
4245 7365 1.271054 ACAACACAGCTCATGGAGACC 60.271 52.381 0.00 0.00 0.00 3.85
4273 7393 9.515226 AAGAACTTATAAACAACTAATCTGCCA 57.485 29.630 0.00 0.00 0.00 4.92
4307 7427 9.104965 TCCTAAATTCGTATTTTGGTATGTCAG 57.895 33.333 20.97 5.07 43.12 3.51
4424 7544 6.835819 ACTACACACAGTTCTAGCTTGATA 57.164 37.500 0.00 0.00 0.00 2.15
4515 9489 2.205074 GCACCAGACAGAATATCCACG 58.795 52.381 0.00 0.00 0.00 4.94
4541 9515 5.303078 TGACCCTGAGAGATAGATAAACTGC 59.697 44.000 0.00 0.00 0.00 4.40
4735 9709 0.894835 TCAGCGCTTCTATGGTCACA 59.105 50.000 7.50 0.00 0.00 3.58
4757 9731 2.292785 ACATCACTCTCTCCCTCCACAT 60.293 50.000 0.00 0.00 0.00 3.21
4793 9767 2.028112 TGCTGGCCTGTAACTCTTACTG 60.028 50.000 11.69 0.00 37.06 2.74
4923 9897 2.548464 TTTCCTTAGGCATGGGCAAT 57.452 45.000 0.00 0.00 43.71 3.56
4975 9949 0.037419 TGTGCTTGCGCTACATCTGA 60.037 50.000 9.73 0.00 36.97 3.27
5041 10015 0.605589 GGTTGTAAAGGCTGAGGCGT 60.606 55.000 0.00 0.00 39.81 5.68
5061 10035 4.794278 AGACAATGATGCTTGCATTTCA 57.206 36.364 9.59 5.53 33.93 2.69
5063 10037 4.098960 CCCTAGACAATGATGCTTGCATTT 59.901 41.667 9.59 0.00 33.93 2.32
5065 10039 3.117776 TCCCTAGACAATGATGCTTGCAT 60.118 43.478 7.91 7.91 0.00 3.96
5066 10040 2.239402 TCCCTAGACAATGATGCTTGCA 59.761 45.455 0.00 0.00 0.00 4.08
5067 10041 2.923121 TCCCTAGACAATGATGCTTGC 58.077 47.619 0.00 0.00 0.00 4.01
5069 10043 4.851639 ACTTCCCTAGACAATGATGCTT 57.148 40.909 0.00 0.00 0.00 3.91
5070 10044 4.225942 TCAACTTCCCTAGACAATGATGCT 59.774 41.667 0.00 0.00 0.00 3.79
5073 10047 5.045286 AGCTTCAACTTCCCTAGACAATGAT 60.045 40.000 0.00 0.00 0.00 2.45
5074 10048 4.287067 AGCTTCAACTTCCCTAGACAATGA 59.713 41.667 0.00 0.00 0.00 2.57
5075 10049 4.583871 AGCTTCAACTTCCCTAGACAATG 58.416 43.478 0.00 0.00 0.00 2.82
5077 10051 3.008049 GGAGCTTCAACTTCCCTAGACAA 59.992 47.826 0.00 0.00 0.00 3.18
5078 10052 2.567615 GGAGCTTCAACTTCCCTAGACA 59.432 50.000 0.00 0.00 0.00 3.41
5079 10053 2.417515 CGGAGCTTCAACTTCCCTAGAC 60.418 54.545 0.00 0.00 0.00 2.59
5083 10120 1.679898 CCGGAGCTTCAACTTCCCT 59.320 57.895 0.00 0.00 0.00 4.20
5086 10123 0.949105 TTCGCCGGAGCTTCAACTTC 60.949 55.000 5.05 0.00 36.60 3.01
5087 10124 0.321653 ATTCGCCGGAGCTTCAACTT 60.322 50.000 5.05 0.00 36.60 2.66
5088 10125 1.021390 CATTCGCCGGAGCTTCAACT 61.021 55.000 5.05 0.00 36.60 3.16
5091 10128 1.003839 AACATTCGCCGGAGCTTCA 60.004 52.632 5.05 0.00 36.60 3.02
5095 10132 1.014352 ATTACAACATTCGCCGGAGC 58.986 50.000 5.05 0.00 0.00 4.70
5099 10136 3.370978 AGACTGAATTACAACATTCGCCG 59.629 43.478 0.00 0.00 36.13 6.46
5101 10138 4.091424 GCAGACTGAATTACAACATTCGC 58.909 43.478 6.65 0.00 36.13 4.70
5103 10140 6.486253 TGAGCAGACTGAATTACAACATTC 57.514 37.500 6.65 0.00 34.23 2.67
5107 10144 3.126000 GGCTGAGCAGACTGAATTACAAC 59.874 47.826 6.82 0.00 32.39 3.32
5138 10241 1.275856 GGGTTGATGGCTGCATTTCAA 59.724 47.619 0.50 4.58 0.00 2.69
5387 10490 9.453572 AAAATCAAGATGTATGTAAGCAAGAGA 57.546 29.630 0.00 0.00 0.00 3.10
5410 10513 8.366401 TCCAGAATTAGCATGACAAATTCAAAA 58.634 29.630 20.57 9.34 40.48 2.44
5458 10561 6.486320 TGATTGCTGTTCATAAGTGAAAGTGA 59.514 34.615 0.00 0.00 45.38 3.41
5747 10850 6.451393 TGAATCCAAAACCCACGATAAAAAG 58.549 36.000 0.00 0.00 0.00 2.27
5860 10964 2.010145 TGCGCTCAGGAACTCATTAC 57.990 50.000 9.73 0.00 34.60 1.89
5890 10994 5.725042 GCACGATAACTTGACAAGCATACAG 60.725 44.000 15.24 8.68 0.00 2.74
5908 11012 2.768253 TCAAACCATGAGAGCACGAT 57.232 45.000 0.00 0.00 33.04 3.73
5936 11040 8.721478 CACAACTACTGTTACTATTTTCAGCAT 58.279 33.333 0.00 0.00 35.47 3.79
5972 11293 9.770097 TTAGTGATCAATAAATCTGTGAGGATC 57.230 33.333 12.93 0.00 0.00 3.36
6010 11331 3.582714 ATAGGCTTTTGCTGCAAAGAC 57.417 42.857 24.83 20.60 46.54 3.01
6042 11363 0.617413 AAGCCTGAGGTGTCTGATGG 59.383 55.000 0.00 0.00 0.00 3.51
6186 11507 1.450848 CGCCTGTGATGATGCTGGT 60.451 57.895 0.00 0.00 0.00 4.00
6189 11510 2.515523 GGCGCCTGTGATGATGCT 60.516 61.111 22.15 0.00 0.00 3.79
6224 11545 2.112297 GCCGGACCACTTGTGGAA 59.888 61.111 24.67 0.00 0.00 3.53
6226 11547 3.901797 GAGGCCGGACCACTTGTGG 62.902 68.421 17.34 17.34 43.14 4.17
6230 11551 2.833151 TATGGGAGGCCGGACCACTT 62.833 60.000 16.69 0.00 43.14 3.16
6234 11555 1.153025 GTTTATGGGAGGCCGGACC 60.153 63.158 1.76 4.96 39.61 4.46
6279 11600 1.065854 GGCATGTGACTTGTAGGAGCT 60.066 52.381 0.00 0.00 0.00 4.09
6285 11606 1.204704 CCTCGAGGCATGTGACTTGTA 59.795 52.381 20.67 0.00 35.96 2.41
6286 11607 0.036952 CCTCGAGGCATGTGACTTGT 60.037 55.000 20.67 0.00 35.96 3.16
6287 11608 0.036952 ACCTCGAGGCATGTGACTTG 60.037 55.000 31.56 3.26 39.32 3.16
6288 11609 0.247736 GACCTCGAGGCATGTGACTT 59.752 55.000 31.56 8.39 39.32 3.01
6289 11610 1.608717 GGACCTCGAGGCATGTGACT 61.609 60.000 31.56 9.21 39.32 3.41
6290 11611 1.153549 GGACCTCGAGGCATGTGAC 60.154 63.158 31.56 13.01 39.32 3.67
6291 11612 1.609210 TGGACCTCGAGGCATGTGA 60.609 57.895 31.56 6.74 39.32 3.58
6292 11613 1.448540 GTGGACCTCGAGGCATGTG 60.449 63.158 31.56 6.99 39.32 3.21
6293 11614 2.660064 GGTGGACCTCGAGGCATGT 61.660 63.158 31.56 12.17 39.32 3.21
6319 11640 2.514824 GCTCGGAACTCCATGGCC 60.515 66.667 6.96 0.00 35.14 5.36
6414 11741 1.065102 CTTACAGATGTGGCATGCTGC 59.935 52.381 18.92 11.17 44.08 5.25
6415 11742 1.065102 GCTTACAGATGTGGCATGCTG 59.935 52.381 18.92 9.29 34.65 4.41
6416 11743 1.064906 AGCTTACAGATGTGGCATGCT 60.065 47.619 18.92 0.00 33.08 3.79
6436 11763 0.033920 ACTGCATGTGAAGACTGCGA 59.966 50.000 0.00 0.00 38.75 5.10
6492 11819 1.267806 CCATGGTGAGTTGCTTGTGAC 59.732 52.381 2.57 0.00 0.00 3.67
6519 11846 1.139654 ACATCCACATCCATCCGAGTG 59.860 52.381 0.00 0.00 0.00 3.51
6615 11942 0.472471 GGGTTGATCGGCCATTCCTA 59.528 55.000 2.24 0.00 0.00 2.94
6624 11951 1.603802 CCGAATGAATGGGTTGATCGG 59.396 52.381 0.00 0.00 0.00 4.18
6657 11984 4.240881 TAGGTACTACGGCGGTGG 57.759 61.111 13.24 6.71 41.75 4.61
6673 12000 3.565010 GGACGGTCATATACAGGGGGATA 60.565 52.174 10.76 0.00 0.00 2.59
6674 12001 2.537143 GACGGTCATATACAGGGGGAT 58.463 52.381 2.62 0.00 0.00 3.85
6675 12002 1.481802 GGACGGTCATATACAGGGGGA 60.482 57.143 10.76 0.00 0.00 4.81
6676 12003 0.974383 GGACGGTCATATACAGGGGG 59.026 60.000 10.76 0.00 0.00 5.40
6677 12004 2.011122 AGGACGGTCATATACAGGGG 57.989 55.000 10.76 0.00 0.00 4.79
6713 12041 1.172180 ACACCTGGTGGTTCGCAATG 61.172 55.000 29.05 1.97 46.05 2.82
6747 12075 7.201821 CCCATAATTAACATGGAGAGGACAAAC 60.202 40.741 16.24 0.00 44.95 2.93
6748 12076 6.833416 CCCATAATTAACATGGAGAGGACAAA 59.167 38.462 16.24 0.00 44.95 2.83
6751 12079 5.941788 ACCCATAATTAACATGGAGAGGAC 58.058 41.667 16.24 0.00 44.95 3.85
6752 12080 6.389869 AGAACCCATAATTAACATGGAGAGGA 59.610 38.462 16.24 0.00 44.95 3.71
6753 12081 6.605119 AGAACCCATAATTAACATGGAGAGG 58.395 40.000 16.24 5.40 44.95 3.69
6755 12083 7.206789 TGAGAACCCATAATTAACATGGAGA 57.793 36.000 16.24 0.00 44.95 3.71
6756 12084 7.941238 AGATGAGAACCCATAATTAACATGGAG 59.059 37.037 16.24 10.36 44.95 3.86
6758 12086 7.720957 TGAGATGAGAACCCATAATTAACATGG 59.279 37.037 9.93 9.93 42.30 3.66
6759 12087 8.681486 TGAGATGAGAACCCATAATTAACATG 57.319 34.615 0.00 0.00 0.00 3.21
6760 12088 9.293404 CATGAGATGAGAACCCATAATTAACAT 57.707 33.333 0.00 0.00 0.00 2.71
6761 12089 7.229306 GCATGAGATGAGAACCCATAATTAACA 59.771 37.037 0.00 0.00 0.00 2.41
6762 12090 7.446625 AGCATGAGATGAGAACCCATAATTAAC 59.553 37.037 0.00 0.00 0.00 2.01
6811 12139 5.182190 TGCCGTAAACATATCAACAACACAT 59.818 36.000 0.00 0.00 0.00 3.21
6816 12144 6.502136 TCAATGCCGTAAACATATCAACAA 57.498 33.333 0.00 0.00 0.00 2.83
6817 12145 6.691754 ATCAATGCCGTAAACATATCAACA 57.308 33.333 0.00 0.00 0.00 3.33
6818 12146 9.677567 ATTTATCAATGCCGTAAACATATCAAC 57.322 29.630 0.00 0.00 0.00 3.18
6820 12148 9.676195 CAATTTATCAATGCCGTAAACATATCA 57.324 29.630 0.00 0.00 0.00 2.15
6821 12149 9.891828 TCAATTTATCAATGCCGTAAACATATC 57.108 29.630 0.00 0.00 0.00 1.63
6824 12152 9.677567 GTATCAATTTATCAATGCCGTAAACAT 57.322 29.630 0.00 0.00 0.00 2.71
6825 12153 8.678199 TGTATCAATTTATCAATGCCGTAAACA 58.322 29.630 0.00 0.00 0.00 2.83
6826 12154 8.953990 GTGTATCAATTTATCAATGCCGTAAAC 58.046 33.333 0.00 0.00 0.00 2.01
6827 12155 7.853437 CGTGTATCAATTTATCAATGCCGTAAA 59.147 33.333 0.00 0.00 0.00 2.01
6866 12195 1.067060 GTTGTGTGGAGTTTGCTTCCC 59.933 52.381 0.00 0.00 0.00 3.97
6962 12291 8.667076 AAAACAGAAGCAGCAAAAGAATTTAT 57.333 26.923 0.00 0.00 37.28 1.40
6964 12293 6.990341 AAAACAGAAGCAGCAAAAGAATTT 57.010 29.167 0.00 0.00 42.41 1.82
6991 12326 6.438763 ACCTTTTAGAAGCGAAAACATCAAG 58.561 36.000 0.00 0.00 0.00 3.02
6992 12327 6.385649 ACCTTTTAGAAGCGAAAACATCAA 57.614 33.333 0.00 0.00 0.00 2.57
6993 12328 6.385649 AACCTTTTAGAAGCGAAAACATCA 57.614 33.333 0.00 0.00 0.00 3.07
6994 12329 5.856986 GGAACCTTTTAGAAGCGAAAACATC 59.143 40.000 0.00 0.00 0.00 3.06
6995 12330 5.300792 TGGAACCTTTTAGAAGCGAAAACAT 59.699 36.000 0.00 0.00 0.00 2.71
6996 12331 4.641094 TGGAACCTTTTAGAAGCGAAAACA 59.359 37.500 0.00 0.00 0.00 2.83
6997 12332 5.177725 TGGAACCTTTTAGAAGCGAAAAC 57.822 39.130 0.00 0.00 0.00 2.43
7003 12338 5.468540 AAACCATGGAACCTTTTAGAAGC 57.531 39.130 21.47 0.00 0.00 3.86
7088 12430 9.029243 CAGTGCATGAAACAAGTAAAACAAATA 57.971 29.630 0.00 0.00 0.00 1.40
7093 12435 6.265577 AGACAGTGCATGAAACAAGTAAAAC 58.734 36.000 0.00 0.00 0.00 2.43
7122 12464 9.226606 ACAATCCTAATTACACATTTCTCGAAA 57.773 29.630 0.00 0.00 34.46 3.46
7123 12465 8.786826 ACAATCCTAATTACACATTTCTCGAA 57.213 30.769 0.00 0.00 0.00 3.71
7124 12466 8.258007 AGACAATCCTAATTACACATTTCTCGA 58.742 33.333 0.00 0.00 0.00 4.04
7125 12467 8.425577 AGACAATCCTAATTACACATTTCTCG 57.574 34.615 0.00 0.00 0.00 4.04
7139 12481 9.667107 CCTAGTCAATACAAAAGACAATCCTAA 57.333 33.333 0.00 0.00 34.80 2.69
7140 12482 8.822805 ACCTAGTCAATACAAAAGACAATCCTA 58.177 33.333 0.00 0.00 34.80 2.94
7141 12483 7.607991 CACCTAGTCAATACAAAAGACAATCCT 59.392 37.037 0.00 0.00 34.80 3.24
7142 12484 7.390718 ACACCTAGTCAATACAAAAGACAATCC 59.609 37.037 0.00 0.00 34.80 3.01
7143 12485 8.324163 ACACCTAGTCAATACAAAAGACAATC 57.676 34.615 0.00 0.00 34.80 2.67
7144 12486 9.216117 GTACACCTAGTCAATACAAAAGACAAT 57.784 33.333 0.00 0.00 34.80 2.71
7145 12487 8.426489 AGTACACCTAGTCAATACAAAAGACAA 58.574 33.333 0.00 0.00 34.80 3.18
7146 12488 7.870954 CAGTACACCTAGTCAATACAAAAGACA 59.129 37.037 0.00 0.00 34.80 3.41
7147 12489 8.086522 TCAGTACACCTAGTCAATACAAAAGAC 58.913 37.037 0.00 0.00 0.00 3.01
7148 12490 8.086522 GTCAGTACACCTAGTCAATACAAAAGA 58.913 37.037 0.00 0.00 0.00 2.52
7149 12491 7.331193 GGTCAGTACACCTAGTCAATACAAAAG 59.669 40.741 0.00 0.00 33.08 2.27
7150 12492 7.156673 GGTCAGTACACCTAGTCAATACAAAA 58.843 38.462 0.00 0.00 33.08 2.44
7151 12493 6.268158 TGGTCAGTACACCTAGTCAATACAAA 59.732 38.462 4.19 0.00 37.34 2.83
7152 12494 5.776208 TGGTCAGTACACCTAGTCAATACAA 59.224 40.000 4.19 0.00 37.34 2.41
7153 12495 5.326900 TGGTCAGTACACCTAGTCAATACA 58.673 41.667 4.19 0.00 37.34 2.29
7154 12496 5.909621 TGGTCAGTACACCTAGTCAATAC 57.090 43.478 4.19 0.00 37.34 1.89
7155 12497 6.573680 GCTTTGGTCAGTACACCTAGTCAATA 60.574 42.308 4.19 0.00 37.34 1.90
7156 12498 5.794894 CTTTGGTCAGTACACCTAGTCAAT 58.205 41.667 4.19 0.00 37.34 2.57
7157 12499 4.502604 GCTTTGGTCAGTACACCTAGTCAA 60.503 45.833 4.19 0.00 37.34 3.18
7158 12500 3.006537 GCTTTGGTCAGTACACCTAGTCA 59.993 47.826 4.19 0.00 37.34 3.41
7159 12501 3.586892 GCTTTGGTCAGTACACCTAGTC 58.413 50.000 4.19 0.00 37.34 2.59
7160 12502 2.302157 GGCTTTGGTCAGTACACCTAGT 59.698 50.000 4.19 0.00 37.34 2.57
7161 12503 2.301870 TGGCTTTGGTCAGTACACCTAG 59.698 50.000 4.19 3.30 37.34 3.02
7162 12504 2.331166 TGGCTTTGGTCAGTACACCTA 58.669 47.619 4.19 0.00 37.34 3.08
7163 12505 1.136828 TGGCTTTGGTCAGTACACCT 58.863 50.000 4.19 0.00 37.34 4.00
7164 12506 2.200373 ATGGCTTTGGTCAGTACACC 57.800 50.000 0.00 0.00 36.90 4.16
7165 12507 4.584327 AAAATGGCTTTGGTCAGTACAC 57.416 40.909 0.00 0.00 0.00 2.90
7166 12508 8.301002 GTTTATAAAATGGCTTTGGTCAGTACA 58.699 33.333 0.00 0.00 0.00 2.90
7167 12509 8.520351 AGTTTATAAAATGGCTTTGGTCAGTAC 58.480 33.333 0.00 0.00 0.00 2.73
7168 12510 8.519526 CAGTTTATAAAATGGCTTTGGTCAGTA 58.480 33.333 16.07 0.00 30.93 2.74
7169 12511 7.015195 ACAGTTTATAAAATGGCTTTGGTCAGT 59.985 33.333 24.75 1.87 38.22 3.41
7170 12512 7.378181 ACAGTTTATAAAATGGCTTTGGTCAG 58.622 34.615 24.75 1.26 38.22 3.51
7171 12513 7.296628 ACAGTTTATAAAATGGCTTTGGTCA 57.703 32.000 24.75 0.00 38.22 4.02
7172 12514 9.353999 CTTACAGTTTATAAAATGGCTTTGGTC 57.646 33.333 24.75 0.00 38.22 4.02
7173 12515 9.084533 TCTTACAGTTTATAAAATGGCTTTGGT 57.915 29.630 24.75 8.68 38.22 3.67
7189 12531 9.561069 AGTTCTACAACATTGATCTTACAGTTT 57.439 29.630 0.00 0.00 34.60 2.66
7190 12532 9.209175 GAGTTCTACAACATTGATCTTACAGTT 57.791 33.333 0.00 0.00 34.60 3.16
7191 12533 8.367911 TGAGTTCTACAACATTGATCTTACAGT 58.632 33.333 0.00 0.00 34.60 3.55
7192 12534 8.763049 TGAGTTCTACAACATTGATCTTACAG 57.237 34.615 0.00 0.00 34.60 2.74
7193 12535 9.554395 TTTGAGTTCTACAACATTGATCTTACA 57.446 29.630 0.00 0.00 34.60 2.41
7194 12536 9.813080 GTTTGAGTTCTACAACATTGATCTTAC 57.187 33.333 0.00 0.00 34.60 2.34
7195 12537 9.778741 AGTTTGAGTTCTACAACATTGATCTTA 57.221 29.630 0.00 0.00 34.60 2.10
7196 12538 8.562892 CAGTTTGAGTTCTACAACATTGATCTT 58.437 33.333 0.00 0.00 34.60 2.40
7197 12539 7.933577 TCAGTTTGAGTTCTACAACATTGATCT 59.066 33.333 0.00 0.00 34.60 2.75
7198 12540 8.012241 GTCAGTTTGAGTTCTACAACATTGATC 58.988 37.037 0.00 0.00 34.60 2.92
7199 12541 7.498900 TGTCAGTTTGAGTTCTACAACATTGAT 59.501 33.333 0.00 0.00 34.60 2.57
7200 12542 6.821160 TGTCAGTTTGAGTTCTACAACATTGA 59.179 34.615 0.00 0.00 34.60 2.57
7201 12543 6.907212 GTGTCAGTTTGAGTTCTACAACATTG 59.093 38.462 0.00 0.00 34.60 2.82
7202 12544 6.823689 AGTGTCAGTTTGAGTTCTACAACATT 59.176 34.615 0.00 0.00 34.60 2.71
7203 12545 6.349300 AGTGTCAGTTTGAGTTCTACAACAT 58.651 36.000 0.00 0.00 34.60 2.71
7204 12546 5.730550 AGTGTCAGTTTGAGTTCTACAACA 58.269 37.500 0.00 0.00 34.60 3.33
7205 12547 5.810587 TGAGTGTCAGTTTGAGTTCTACAAC 59.189 40.000 0.00 0.00 0.00 3.32
7206 12548 5.810587 GTGAGTGTCAGTTTGAGTTCTACAA 59.189 40.000 0.00 0.00 0.00 2.41
7207 12549 5.348986 GTGAGTGTCAGTTTGAGTTCTACA 58.651 41.667 0.00 0.00 0.00 2.74
7208 12550 4.745620 GGTGAGTGTCAGTTTGAGTTCTAC 59.254 45.833 0.00 0.00 0.00 2.59
7209 12551 4.202223 GGGTGAGTGTCAGTTTGAGTTCTA 60.202 45.833 0.00 0.00 0.00 2.10
7210 12552 3.432326 GGGTGAGTGTCAGTTTGAGTTCT 60.432 47.826 0.00 0.00 0.00 3.01
7211 12553 2.872858 GGGTGAGTGTCAGTTTGAGTTC 59.127 50.000 0.00 0.00 0.00 3.01
7212 12554 2.238646 TGGGTGAGTGTCAGTTTGAGTT 59.761 45.455 0.00 0.00 0.00 3.01
7213 12555 1.837439 TGGGTGAGTGTCAGTTTGAGT 59.163 47.619 0.00 0.00 0.00 3.41
7214 12556 2.620251 TGGGTGAGTGTCAGTTTGAG 57.380 50.000 0.00 0.00 0.00 3.02
7215 12557 3.576078 ATTGGGTGAGTGTCAGTTTGA 57.424 42.857 0.00 0.00 0.00 2.69
7216 12558 3.753272 CCTATTGGGTGAGTGTCAGTTTG 59.247 47.826 0.00 0.00 0.00 2.93
7217 12559 4.021102 CCTATTGGGTGAGTGTCAGTTT 57.979 45.455 0.00 0.00 0.00 2.66
7218 12560 3.703001 CCTATTGGGTGAGTGTCAGTT 57.297 47.619 0.00 0.00 0.00 3.16
7231 12573 4.236527 AGGAGCTTTGTTACCCTATTGG 57.763 45.455 0.00 0.00 41.37 3.16
7232 12574 6.831976 AGATAGGAGCTTTGTTACCCTATTG 58.168 40.000 8.77 0.00 39.54 1.90
7233 12575 6.847036 AGAGATAGGAGCTTTGTTACCCTATT 59.153 38.462 8.77 1.49 39.54 1.73
7234 12576 6.386284 AGAGATAGGAGCTTTGTTACCCTAT 58.614 40.000 7.43 7.43 41.46 2.57
7235 12577 5.778542 AGAGATAGGAGCTTTGTTACCCTA 58.221 41.667 0.00 0.00 34.39 3.53
7236 12578 4.625963 AGAGATAGGAGCTTTGTTACCCT 58.374 43.478 0.00 0.00 0.00 4.34
7237 12579 4.406003 TGAGAGATAGGAGCTTTGTTACCC 59.594 45.833 0.00 0.00 0.00 3.69
7238 12580 5.599999 TGAGAGATAGGAGCTTTGTTACC 57.400 43.478 0.00 0.00 0.00 2.85
7239 12581 6.419413 CGATTGAGAGATAGGAGCTTTGTTAC 59.581 42.308 0.00 0.00 0.00 2.50
7240 12582 6.321435 TCGATTGAGAGATAGGAGCTTTGTTA 59.679 38.462 0.00 0.00 0.00 2.41
7241 12583 5.127845 TCGATTGAGAGATAGGAGCTTTGTT 59.872 40.000 0.00 0.00 0.00 2.83
7242 12584 4.646945 TCGATTGAGAGATAGGAGCTTTGT 59.353 41.667 0.00 0.00 0.00 2.83
7243 12585 4.981674 GTCGATTGAGAGATAGGAGCTTTG 59.018 45.833 0.00 0.00 0.00 2.77
7244 12586 4.038642 GGTCGATTGAGAGATAGGAGCTTT 59.961 45.833 0.00 0.00 0.00 3.51
7245 12587 3.572255 GGTCGATTGAGAGATAGGAGCTT 59.428 47.826 0.00 0.00 0.00 3.74
7246 12588 3.153919 GGTCGATTGAGAGATAGGAGCT 58.846 50.000 0.00 0.00 0.00 4.09
7247 12589 2.095466 CGGTCGATTGAGAGATAGGAGC 60.095 54.545 0.00 0.00 0.00 4.70
7248 12590 3.403968 TCGGTCGATTGAGAGATAGGAG 58.596 50.000 0.00 0.00 0.00 3.69
7249 12591 3.071167 TCTCGGTCGATTGAGAGATAGGA 59.929 47.826 13.63 0.00 36.36 2.94
7250 12592 3.403968 TCTCGGTCGATTGAGAGATAGG 58.596 50.000 13.63 0.00 36.36 2.57
7251 12593 5.621197 ATTCTCGGTCGATTGAGAGATAG 57.379 43.478 16.09 0.00 41.87 2.08
7252 12594 7.012989 TGTTAATTCTCGGTCGATTGAGAGATA 59.987 37.037 16.09 11.84 41.87 1.98
7253 12595 4.927978 AATTCTCGGTCGATTGAGAGAT 57.072 40.909 16.09 11.47 41.87 2.75
7254 12596 5.124936 TGTTAATTCTCGGTCGATTGAGAGA 59.875 40.000 16.09 11.90 41.87 3.10
7255 12597 5.340803 TGTTAATTCTCGGTCGATTGAGAG 58.659 41.667 16.09 10.15 41.87 3.20
7256 12598 5.319140 TGTTAATTCTCGGTCGATTGAGA 57.681 39.130 13.63 13.63 39.38 3.27
7257 12599 6.292381 GGAATGTTAATTCTCGGTCGATTGAG 60.292 42.308 9.83 9.83 41.74 3.02
7258 12600 5.522460 GGAATGTTAATTCTCGGTCGATTGA 59.478 40.000 0.00 0.00 41.74 2.57
7259 12601 5.523916 AGGAATGTTAATTCTCGGTCGATTG 59.476 40.000 0.00 0.00 41.74 2.67
7260 12602 5.671493 AGGAATGTTAATTCTCGGTCGATT 58.329 37.500 0.00 0.00 41.74 3.34
7261 12603 5.277857 AGGAATGTTAATTCTCGGTCGAT 57.722 39.130 0.00 0.00 41.74 3.59
7262 12604 4.730949 AGGAATGTTAATTCTCGGTCGA 57.269 40.909 0.00 0.00 41.74 4.20
7263 12605 5.589192 ACTAGGAATGTTAATTCTCGGTCG 58.411 41.667 0.00 0.00 41.74 4.79
7264 12606 6.570692 TGACTAGGAATGTTAATTCTCGGTC 58.429 40.000 0.00 5.39 41.74 4.79
7265 12607 6.540438 TGACTAGGAATGTTAATTCTCGGT 57.460 37.500 0.00 0.00 41.74 4.69
7266 12608 8.438676 AAATGACTAGGAATGTTAATTCTCGG 57.561 34.615 0.00 0.00 41.74 4.63
7310 12652 8.848182 ACAACATGGCAAACATATTTTCAATTT 58.152 25.926 0.00 0.00 37.84 1.82
7311 12653 8.291032 CACAACATGGCAAACATATTTTCAATT 58.709 29.630 0.00 0.00 37.84 2.32
7312 12654 7.660617 TCACAACATGGCAAACATATTTTCAAT 59.339 29.630 0.00 0.00 37.84 2.57
7313 12655 6.988580 TCACAACATGGCAAACATATTTTCAA 59.011 30.769 0.00 0.00 37.84 2.69
7314 12656 6.519382 TCACAACATGGCAAACATATTTTCA 58.481 32.000 0.00 0.00 37.84 2.69
7315 12657 7.418840 TTCACAACATGGCAAACATATTTTC 57.581 32.000 0.00 0.00 37.84 2.29
7316 12658 7.798596 TTTCACAACATGGCAAACATATTTT 57.201 28.000 0.00 0.00 37.84 1.82
7317 12659 7.798596 TTTTCACAACATGGCAAACATATTT 57.201 28.000 0.00 0.00 37.84 1.40
7318 12660 7.879160 AGATTTTCACAACATGGCAAACATATT 59.121 29.630 0.00 0.00 37.84 1.28
7319 12661 7.388437 AGATTTTCACAACATGGCAAACATAT 58.612 30.769 0.00 0.00 37.84 1.78
7320 12662 6.757237 AGATTTTCACAACATGGCAAACATA 58.243 32.000 0.00 0.00 37.84 2.29
7321 12663 5.613329 AGATTTTCACAACATGGCAAACAT 58.387 33.333 0.00 0.00 41.57 2.71
7322 12664 5.021033 AGATTTTCACAACATGGCAAACA 57.979 34.783 0.00 0.00 0.00 2.83
7323 12665 6.215845 ACTAGATTTTCACAACATGGCAAAC 58.784 36.000 0.00 0.00 0.00 2.93
7324 12666 6.403866 ACTAGATTTTCACAACATGGCAAA 57.596 33.333 0.00 0.00 0.00 3.68
7325 12667 7.701539 ATACTAGATTTTCACAACATGGCAA 57.298 32.000 0.00 0.00 0.00 4.52
7326 12668 7.701539 AATACTAGATTTTCACAACATGGCA 57.298 32.000 0.00 0.00 0.00 4.92
7375 12717 8.458843 CGGTGAACATGGTTTTAGAGAAATATT 58.541 33.333 0.00 0.00 0.00 1.28
7376 12718 7.610305 ACGGTGAACATGGTTTTAGAGAAATAT 59.390 33.333 0.00 0.00 0.00 1.28
7377 12719 6.938030 ACGGTGAACATGGTTTTAGAGAAATA 59.062 34.615 0.00 0.00 0.00 1.40
7378 12720 5.768164 ACGGTGAACATGGTTTTAGAGAAAT 59.232 36.000 0.00 0.00 0.00 2.17
7379 12721 5.008217 CACGGTGAACATGGTTTTAGAGAAA 59.992 40.000 0.74 0.00 0.00 2.52
7380 12722 4.513692 CACGGTGAACATGGTTTTAGAGAA 59.486 41.667 0.74 0.00 0.00 2.87
7381 12723 4.062293 CACGGTGAACATGGTTTTAGAGA 58.938 43.478 0.74 0.00 0.00 3.10
7382 12724 4.062293 TCACGGTGAACATGGTTTTAGAG 58.938 43.478 8.68 0.00 0.00 2.43
7383 12725 3.810941 GTCACGGTGAACATGGTTTTAGA 59.189 43.478 13.23 0.00 0.00 2.10
7384 12726 3.363575 CGTCACGGTGAACATGGTTTTAG 60.364 47.826 13.23 0.00 0.00 1.85
7385 12727 2.544686 CGTCACGGTGAACATGGTTTTA 59.455 45.455 13.23 0.00 0.00 1.52
7386 12728 1.332375 CGTCACGGTGAACATGGTTTT 59.668 47.619 13.23 0.00 0.00 2.43
7387 12729 0.941542 CGTCACGGTGAACATGGTTT 59.058 50.000 13.23 0.00 0.00 3.27
7388 12730 0.179067 ACGTCACGGTGAACATGGTT 60.179 50.000 13.23 0.00 0.00 3.67
7389 12731 0.675083 TACGTCACGGTGAACATGGT 59.325 50.000 13.23 8.50 0.00 3.55
7390 12732 1.458064 GTTACGTCACGGTGAACATGG 59.542 52.381 13.23 2.98 0.00 3.66
7391 12733 1.458064 GGTTACGTCACGGTGAACATG 59.542 52.381 13.23 5.95 0.00 3.21
7392 12734 1.342174 AGGTTACGTCACGGTGAACAT 59.658 47.619 13.23 2.06 0.00 2.71
7393 12735 0.746063 AGGTTACGTCACGGTGAACA 59.254 50.000 13.23 0.00 0.00 3.18
7394 12736 2.704725 TAGGTTACGTCACGGTGAAC 57.295 50.000 13.23 7.26 0.00 3.18
7395 12737 3.255395 TGAATAGGTTACGTCACGGTGAA 59.745 43.478 13.23 0.00 0.00 3.18
7396 12738 2.819019 TGAATAGGTTACGTCACGGTGA 59.181 45.455 6.76 6.76 0.00 4.02
7397 12739 3.220507 TGAATAGGTTACGTCACGGTG 57.779 47.619 0.35 0.56 0.00 4.94
7398 12740 3.698040 AGATGAATAGGTTACGTCACGGT 59.302 43.478 0.35 0.00 0.00 4.83
7399 12741 4.303086 AGATGAATAGGTTACGTCACGG 57.697 45.455 0.35 0.00 0.00 4.94
7400 12742 4.910456 GCTAGATGAATAGGTTACGTCACG 59.090 45.833 0.00 0.00 0.00 4.35
7401 12743 4.910456 CGCTAGATGAATAGGTTACGTCAC 59.090 45.833 0.00 0.00 0.00 3.67
7402 12744 4.556104 GCGCTAGATGAATAGGTTACGTCA 60.556 45.833 0.00 0.00 0.00 4.35
7403 12745 3.913163 GCGCTAGATGAATAGGTTACGTC 59.087 47.826 0.00 0.00 0.00 4.34
7404 12746 3.317149 TGCGCTAGATGAATAGGTTACGT 59.683 43.478 9.73 0.00 0.00 3.57
7405 12747 3.897325 TGCGCTAGATGAATAGGTTACG 58.103 45.455 9.73 0.00 0.00 3.18
7406 12748 5.529791 TCTTGCGCTAGATGAATAGGTTAC 58.470 41.667 17.69 0.00 0.00 2.50
7407 12749 5.784578 TCTTGCGCTAGATGAATAGGTTA 57.215 39.130 17.69 0.00 0.00 2.85
7408 12750 4.672587 TCTTGCGCTAGATGAATAGGTT 57.327 40.909 17.69 0.00 0.00 3.50
7409 12751 4.672587 TTCTTGCGCTAGATGAATAGGT 57.327 40.909 21.87 0.00 0.00 3.08
7410 12752 5.698089 TCATTTCTTGCGCTAGATGAATAGG 59.302 40.000 21.87 9.15 0.00 2.57
7411 12753 6.423302 AGTCATTTCTTGCGCTAGATGAATAG 59.577 38.462 21.87 13.21 0.00 1.73
7412 12754 6.283694 AGTCATTTCTTGCGCTAGATGAATA 58.716 36.000 21.87 4.23 0.00 1.75
7413 12755 5.121811 AGTCATTTCTTGCGCTAGATGAAT 58.878 37.500 21.87 18.51 0.00 2.57
7414 12756 4.507710 AGTCATTTCTTGCGCTAGATGAA 58.492 39.130 21.87 14.47 0.00 2.57
7415 12757 4.128925 AGTCATTTCTTGCGCTAGATGA 57.871 40.909 21.87 19.35 0.00 2.92
7416 12758 5.046529 ACTAGTCATTTCTTGCGCTAGATG 58.953 41.667 21.87 17.46 35.77 2.90
7417 12759 5.046529 CACTAGTCATTTCTTGCGCTAGAT 58.953 41.667 21.87 8.82 35.77 1.98
7418 12760 4.082190 ACACTAGTCATTTCTTGCGCTAGA 60.082 41.667 17.69 17.69 35.77 2.43
7419 12761 4.177026 ACACTAGTCATTTCTTGCGCTAG 58.823 43.478 12.92 12.92 37.02 3.42
7420 12762 4.188247 ACACTAGTCATTTCTTGCGCTA 57.812 40.909 9.73 0.00 0.00 4.26
7421 12763 3.045601 ACACTAGTCATTTCTTGCGCT 57.954 42.857 9.73 0.00 0.00 5.92
7422 12764 3.813529 AACACTAGTCATTTCTTGCGC 57.186 42.857 0.00 0.00 0.00 6.09
7423 12765 5.990408 AGAAAACACTAGTCATTTCTTGCG 58.010 37.500 19.62 0.00 38.59 4.85
7424 12766 7.195839 AGAGAAAACACTAGTCATTTCTTGC 57.804 36.000 23.44 15.98 41.00 4.01
7464 12806 9.570468 ACATTGAGATCAGTGCAAGATTATATT 57.430 29.630 5.35 0.00 37.12 1.28
7465 12807 9.217278 GACATTGAGATCAGTGCAAGATTATAT 57.783 33.333 5.35 0.00 37.12 0.86
7466 12808 8.206189 TGACATTGAGATCAGTGCAAGATTATA 58.794 33.333 5.35 0.00 37.12 0.98
7467 12809 7.052248 TGACATTGAGATCAGTGCAAGATTAT 58.948 34.615 5.35 0.00 37.12 1.28
7468 12810 6.408869 TGACATTGAGATCAGTGCAAGATTA 58.591 36.000 5.35 0.00 37.12 1.75
7469 12811 5.250982 TGACATTGAGATCAGTGCAAGATT 58.749 37.500 5.35 0.00 37.12 2.40
7470 12812 4.840271 TGACATTGAGATCAGTGCAAGAT 58.160 39.130 5.35 2.76 37.12 2.40
7471 12813 4.276058 TGACATTGAGATCAGTGCAAGA 57.724 40.909 5.35 0.00 37.12 3.02
7472 12814 5.366829 TTTGACATTGAGATCAGTGCAAG 57.633 39.130 5.35 0.00 37.12 4.01
7473 12815 5.391203 CGATTTGACATTGAGATCAGTGCAA 60.391 40.000 5.35 7.78 37.12 4.08
7474 12816 4.093850 CGATTTGACATTGAGATCAGTGCA 59.906 41.667 5.35 2.74 37.12 4.57
7475 12817 4.330894 TCGATTTGACATTGAGATCAGTGC 59.669 41.667 5.35 0.45 37.12 4.40
7476 12818 6.419771 CATCGATTTGACATTGAGATCAGTG 58.580 40.000 0.00 4.00 39.19 3.66
7477 12819 5.526479 CCATCGATTTGACATTGAGATCAGT 59.474 40.000 0.00 0.00 0.00 3.41
7478 12820 5.560375 GCCATCGATTTGACATTGAGATCAG 60.560 44.000 0.00 0.00 0.00 2.90
7479 12821 4.274214 GCCATCGATTTGACATTGAGATCA 59.726 41.667 0.00 0.00 0.00 2.92
7480 12822 4.514441 AGCCATCGATTTGACATTGAGATC 59.486 41.667 0.00 0.00 0.00 2.75
7481 12823 4.458397 AGCCATCGATTTGACATTGAGAT 58.542 39.130 0.00 0.00 0.00 2.75
7482 12824 3.877559 AGCCATCGATTTGACATTGAGA 58.122 40.909 0.00 0.00 0.00 3.27
7483 12825 4.627611 AAGCCATCGATTTGACATTGAG 57.372 40.909 0.00 0.00 0.00 3.02
7484 12826 4.437255 CGAAAGCCATCGATTTGACATTGA 60.437 41.667 0.00 0.00 45.48 2.57
7485 12827 3.787634 CGAAAGCCATCGATTTGACATTG 59.212 43.478 0.00 0.00 45.48 2.82
7486 12828 3.689161 TCGAAAGCCATCGATTTGACATT 59.311 39.130 7.30 0.00 46.12 2.71
7487 12829 3.270027 TCGAAAGCCATCGATTTGACAT 58.730 40.909 7.30 0.00 46.12 3.06
7488 12830 2.694213 TCGAAAGCCATCGATTTGACA 58.306 42.857 7.30 0.00 46.12 3.58
7496 12838 3.085443 AGTCTACATCGAAAGCCATCG 57.915 47.619 2.52 2.52 44.04 3.84
7497 12839 5.833082 TCTTAGTCTACATCGAAAGCCATC 58.167 41.667 0.00 0.00 0.00 3.51
7498 12840 5.854010 TCTTAGTCTACATCGAAAGCCAT 57.146 39.130 0.00 0.00 0.00 4.40
7499 12841 5.854010 ATCTTAGTCTACATCGAAAGCCA 57.146 39.130 0.00 0.00 0.00 4.75
7500 12842 8.541312 GTTAAATCTTAGTCTACATCGAAAGCC 58.459 37.037 0.00 0.00 0.00 4.35
7501 12843 9.303537 AGTTAAATCTTAGTCTACATCGAAAGC 57.696 33.333 0.00 0.00 0.00 3.51
7532 12874 4.272018 CGTGCTAATTCTCATTCCCTTGAG 59.728 45.833 0.00 0.00 43.70 3.02
7533 12875 4.081142 TCGTGCTAATTCTCATTCCCTTGA 60.081 41.667 0.00 0.00 0.00 3.02
7534 12876 4.191544 TCGTGCTAATTCTCATTCCCTTG 58.808 43.478 0.00 0.00 0.00 3.61
7535 12877 4.162320 TCTCGTGCTAATTCTCATTCCCTT 59.838 41.667 0.00 0.00 0.00 3.95
7536 12878 3.706594 TCTCGTGCTAATTCTCATTCCCT 59.293 43.478 0.00 0.00 0.00 4.20
7537 12879 4.060038 TCTCGTGCTAATTCTCATTCCC 57.940 45.455 0.00 0.00 0.00 3.97
7538 12880 7.148641 TCTTATCTCGTGCTAATTCTCATTCC 58.851 38.462 0.00 0.00 0.00 3.01
7539 12881 8.581057 TTCTTATCTCGTGCTAATTCTCATTC 57.419 34.615 0.00 0.00 0.00 2.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.