Multiple sequence alignment - TraesCS5A01G087900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G087900 chr5A 100.000 6353 0 0 1 6353 118345328 118351680 0.000000e+00 11732
1 TraesCS5A01G087900 chr5A 99.837 2453 4 0 1 2453 117510572 117508120 0.000000e+00 4508
2 TraesCS5A01G087900 chr5A 94.507 2476 115 10 258 2722 102842063 102839598 0.000000e+00 3799
3 TraesCS5A01G087900 chr5A 90.586 2645 206 19 566 3198 298532223 298534836 0.000000e+00 3465
4 TraesCS5A01G087900 chr5A 98.377 1664 26 1 3735 5397 117506611 117504948 0.000000e+00 2922
5 TraesCS5A01G087900 chr5A 98.452 1292 17 2 2451 3739 117507956 117506665 0.000000e+00 2272
6 TraesCS5A01G087900 chr5A 96.373 1020 34 3 2720 3737 102839500 102838482 0.000000e+00 1676
7 TraesCS5A01G087900 chr5A 96.355 1015 33 1 3753 4763 102838408 102837394 0.000000e+00 1666
8 TraesCS5A01G087900 chr5A 94.101 712 26 4 5484 6184 102836561 102835855 0.000000e+00 1068
9 TraesCS5A01G087900 chr5A 94.519 675 22 4 5523 6184 117504914 117504242 0.000000e+00 1027
10 TraesCS5A01G087900 chr5A 100.000 356 0 0 6601 6956 118351928 118352283 0.000000e+00 658
11 TraesCS5A01G087900 chr5A 86.667 360 36 9 3215 3572 298535000 298535349 8.460000e-104 388
12 TraesCS5A01G087900 chr5A 87.926 323 34 2 5860 6182 185645408 185645725 6.590000e-100 375
13 TraesCS5A01G087900 chr5A 82.018 228 24 15 262 478 298531956 298532177 1.990000e-40 178
14 TraesCS5A01G087900 chr5A 94.186 86 4 1 6264 6349 117504249 117504165 5.660000e-26 130
15 TraesCS5A01G087900 chr5B 96.305 2598 85 7 468 3056 123685867 123688462 0.000000e+00 4255
16 TraesCS5A01G087900 chr5B 96.495 2425 82 3 468 2891 122852376 122849954 0.000000e+00 4004
17 TraesCS5A01G087900 chr5B 89.339 2664 214 30 566 3198 248757141 248759765 0.000000e+00 3282
18 TraesCS5A01G087900 chr5B 96.616 1714 54 4 3735 5447 123689170 123690880 0.000000e+00 2841
19 TraesCS5A01G087900 chr5B 96.443 1715 55 6 3735 5447 122848939 122847229 0.000000e+00 2824
20 TraesCS5A01G087900 chr5B 96.959 855 21 2 2890 3739 122849849 122848995 0.000000e+00 1430
21 TraesCS5A01G087900 chr5B 97.538 650 13 2 3093 3739 123688465 123689114 0.000000e+00 1109
22 TraesCS5A01G087900 chr5B 94.651 673 22 5 5523 6183 122847229 122846559 0.000000e+00 1031
23 TraesCS5A01G087900 chr5B 93.491 676 17 9 5517 6184 123690874 123691530 0.000000e+00 979
24 TraesCS5A01G087900 chr5B 86.464 362 34 10 3215 3572 248759953 248760303 3.940000e-102 383
25 TraesCS5A01G087900 chr5B 83.260 227 22 13 262 478 248756878 248757098 1.980000e-45 195
26 TraesCS5A01G087900 chr5B 84.925 199 18 7 261 448 122852784 122852587 2.560000e-44 191
27 TraesCS5A01G087900 chr5D 95.764 2573 83 12 159 2722 109807637 109810192 0.000000e+00 4124
28 TraesCS5A01G087900 chr5D 95.298 2467 103 9 258 2719 99915872 99918330 0.000000e+00 3901
29 TraesCS5A01G087900 chr5D 95.670 2448 55 13 3753 6184 99919521 99921933 0.000000e+00 3886
30 TraesCS5A01G087900 chr5D 96.134 1733 45 4 3735 5447 109811370 109813100 0.000000e+00 2809
31 TraesCS5A01G087900 chr5D 96.582 1024 30 5 2720 3739 99918426 99919448 0.000000e+00 1692
32 TraesCS5A01G087900 chr5D 96.285 1023 28 4 2720 3739 109810285 109811300 0.000000e+00 1670
33 TraesCS5A01G087900 chr5D 95.876 679 16 3 5517 6184 109813094 109813771 0.000000e+00 1088
34 TraesCS5A01G087900 chr5D 94.872 390 17 2 5794 6183 112947746 112948132 2.150000e-169 606
35 TraesCS5A01G087900 chr5D 92.667 150 7 1 82 231 109807251 109807396 5.470000e-51 213
36 TraesCS5A01G087900 chr6B 94.604 2465 120 8 258 2717 184003215 184005671 0.000000e+00 3803
37 TraesCS5A01G087900 chr6B 96.984 1724 48 3 3753 5473 184006868 184008590 0.000000e+00 2892
38 TraesCS5A01G087900 chr6B 96.090 1023 33 4 2720 3739 184005777 184006795 0.000000e+00 1661
39 TraesCS5A01G087900 chr6B 93.844 666 22 5 5533 6184 184008586 184009246 0.000000e+00 985
40 TraesCS5A01G087900 chr7D 97.484 954 23 1 4393 5345 561633683 561632730 0.000000e+00 1628
41 TraesCS5A01G087900 chr7D 95.663 415 10 1 5497 5903 561632710 561632296 0.000000e+00 660
42 TraesCS5A01G087900 chr1A 96.440 955 32 2 4393 5345 75199403 75200357 0.000000e+00 1574
43 TraesCS5A01G087900 chr1A 92.768 401 21 1 5511 5903 75200357 75200757 2.180000e-159 573
44 TraesCS5A01G087900 chr1A 95.789 95 4 0 1 95 33392620 33392526 3.360000e-33 154
45 TraesCS5A01G087900 chr7B 96.226 954 33 2 4393 5345 641949496 641950447 0.000000e+00 1559
46 TraesCS5A01G087900 chr7B 99.160 357 2 1 6601 6956 339646127 339646483 5.880000e-180 641
47 TraesCS5A01G087900 chr7B 98.746 319 2 2 6640 6956 162573314 162573632 3.640000e-157 566
48 TraesCS5A01G087900 chr7B 99.353 309 1 1 6649 6956 49557411 49557719 6.090000e-155 558
49 TraesCS5A01G087900 chr3A 98.880 357 3 1 6601 6956 125438669 125438313 2.740000e-178 636
50 TraesCS5A01G087900 chr3A 100.000 86 0 0 1 86 217823286 217823371 7.220000e-35 159
51 TraesCS5A01G087900 chr3A 95.745 94 4 0 1 94 749430528 749430621 1.210000e-32 152
52 TraesCS5A01G087900 chr2B 98.876 356 4 0 6601 6956 500990978 500991333 2.740000e-178 636
53 TraesCS5A01G087900 chr2B 92.750 400 21 1 5501 5892 792561676 792561277 7.830000e-159 571
54 TraesCS5A01G087900 chr3B 98.319 357 4 2 6601 6956 302583028 302582673 5.920000e-175 625
55 TraesCS5A01G087900 chr3B 99.083 327 2 1 6601 6926 1357227 1357553 2.800000e-163 586
56 TraesCS5A01G087900 chr3B 99.083 327 2 1 6601 6926 663524858 663524532 2.800000e-163 586
57 TraesCS5A01G087900 chr3B 97.500 80 0 1 6601 6678 558563392 558563313 1.220000e-27 135
58 TraesCS5A01G087900 chr7A 93.827 405 17 1 5507 5903 210624381 210624785 2.780000e-168 603
59 TraesCS5A01G087900 chr4B 99.388 327 1 1 6601 6926 37321923 37322249 6.010000e-165 592
60 TraesCS5A01G087900 chr4B 100.000 88 0 0 1 88 617283164 617283077 5.580000e-36 163
61 TraesCS5A01G087900 chr6A 100.000 86 0 0 1 86 349516558 349516473 7.220000e-35 159
62 TraesCS5A01G087900 chr2A 100.000 86 0 0 1 86 455924162 455924077 7.220000e-35 159
63 TraesCS5A01G087900 chr2A 97.753 89 2 0 2 90 118201584 118201672 3.360000e-33 154
64 TraesCS5A01G087900 chr1B 100.000 83 0 0 1 83 520523833 520523915 3.360000e-33 154


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G087900 chr5A 118345328 118352283 6955 False 6195.000000 11732 100.000000 1 6956 2 chr5A.!!$F2 6955
1 TraesCS5A01G087900 chr5A 117504165 117510572 6407 True 2171.800000 4508 97.074200 1 6349 5 chr5A.!!$R2 6348
2 TraesCS5A01G087900 chr5A 102835855 102842063 6208 True 2052.250000 3799 95.334000 258 6184 4 chr5A.!!$R1 5926
3 TraesCS5A01G087900 chr5A 298531956 298535349 3393 False 1343.666667 3465 86.423667 262 3572 3 chr5A.!!$F3 3310
4 TraesCS5A01G087900 chr5B 123685867 123691530 5663 False 2296.000000 4255 95.987500 468 6184 4 chr5B.!!$F1 5716
5 TraesCS5A01G087900 chr5B 122846559 122852784 6225 True 1896.000000 4004 93.894600 261 6183 5 chr5B.!!$R1 5922
6 TraesCS5A01G087900 chr5B 248756878 248760303 3425 False 1286.666667 3282 86.354333 262 3572 3 chr5B.!!$F2 3310
7 TraesCS5A01G087900 chr5D 99915872 99921933 6061 False 3159.666667 3901 95.850000 258 6184 3 chr5D.!!$F2 5926
8 TraesCS5A01G087900 chr5D 109807251 109813771 6520 False 1980.800000 4124 95.345200 82 6184 5 chr5D.!!$F3 6102
9 TraesCS5A01G087900 chr6B 184003215 184009246 6031 False 2335.250000 3803 95.380500 258 6184 4 chr6B.!!$F1 5926
10 TraesCS5A01G087900 chr7D 561632296 561633683 1387 True 1144.000000 1628 96.573500 4393 5903 2 chr7D.!!$R1 1510
11 TraesCS5A01G087900 chr1A 75199403 75200757 1354 False 1073.500000 1574 94.604000 4393 5903 2 chr1A.!!$F1 1510
12 TraesCS5A01G087900 chr7B 641949496 641950447 951 False 1559.000000 1559 96.226000 4393 5345 1 chr7B.!!$F4 952

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
3027 4081 1.532868 CCTCCAGTTCTCAACAAAGCG 59.467 52.381 0.00 0.0 0.00 4.68 F
4076 5410 0.391661 AATCACGTGCGGAGATTGCT 60.392 50.000 11.67 0.0 31.26 3.91 F
5483 7036 0.923358 TCTCTCTGTCTCTCCCTCCC 59.077 60.000 0.00 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
4610 5967 0.904865 TCAAGGGGAGACGTGATGCT 60.905 55.0 0.00 0.00 0.00 3.79 R
5730 7291 0.535335 TATGACCCACTTGTCCTCGC 59.465 55.0 0.00 0.00 34.25 5.03 R
6640 8219 0.302288 TTTTCATGCGCGCGGTATAC 59.698 50.0 33.06 15.04 0.00 1.47 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3027 4081 1.532868 CCTCCAGTTCTCAACAAAGCG 59.467 52.381 0.00 0.00 0.00 4.68
3835 5169 4.917415 GCATCGCTGTTGTGTTTCTTTTAT 59.083 37.500 0.00 0.00 0.00 1.40
3957 5291 2.418060 CGCAGGTTGGGAAAACTTTTGT 60.418 45.455 0.00 0.00 31.21 2.83
4076 5410 0.391661 AATCACGTGCGGAGATTGCT 60.392 50.000 11.67 0.00 31.26 3.91
4216 5550 3.569701 CACCTCAAACAGCAAAGGTATGT 59.430 43.478 0.00 0.00 40.13 2.29
4274 5612 1.599542 GGTGGATATTGACGCAAGAGC 59.400 52.381 0.00 0.00 43.62 4.09
4610 5967 4.772624 ACACACTATCTGAAGTTCTGGCTA 59.227 41.667 9.59 2.50 0.00 3.93
5315 6842 4.153835 CCTTTTAAAGTCTGCTGCTCTCAG 59.846 45.833 0.00 0.00 43.16 3.35
5453 7006 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5454 7007 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5455 7008 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5456 7009 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5457 7010 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5458 7011 4.219115 TCTCTCTCTCTCTCTCTCTCTCC 58.781 52.174 0.00 0.00 0.00 3.71
5459 7012 3.309296 TCTCTCTCTCTCTCTCTCTCCC 58.691 54.545 0.00 0.00 0.00 4.30
5460 7013 3.051803 TCTCTCTCTCTCTCTCTCTCCCT 60.052 52.174 0.00 0.00 0.00 4.20
5461 7014 3.309296 TCTCTCTCTCTCTCTCTCCCTC 58.691 54.545 0.00 0.00 0.00 4.30
5462 7015 3.051803 TCTCTCTCTCTCTCTCTCCCTCT 60.052 52.174 0.00 0.00 0.00 3.69
5463 7016 3.309296 TCTCTCTCTCTCTCTCCCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
5464 7017 3.051803 TCTCTCTCTCTCTCTCCCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
5465 7018 3.309296 TCTCTCTCTCTCTCCCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
5466 7019 3.051803 TCTCTCTCTCTCTCCCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
5467 7020 3.309296 TCTCTCTCTCTCCCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
5468 7021 3.051803 TCTCTCTCTCTCCCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
5469 7022 3.309296 TCTCTCTCTCCCTCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
5470 7023 3.051803 TCTCTCTCTCCCTCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
5471 7024 3.041211 TCTCTCTCCCTCTCTCTCTCTG 58.959 54.545 0.00 0.00 0.00 3.35
5472 7025 2.774234 CTCTCTCCCTCTCTCTCTCTGT 59.226 54.545 0.00 0.00 0.00 3.41
5473 7026 2.771943 TCTCTCCCTCTCTCTCTCTGTC 59.228 54.545 0.00 0.00 0.00 3.51
5474 7027 2.774234 CTCTCCCTCTCTCTCTCTGTCT 59.226 54.545 0.00 0.00 0.00 3.41
5475 7028 2.771943 TCTCCCTCTCTCTCTCTGTCTC 59.228 54.545 0.00 0.00 0.00 3.36
5476 7029 2.774234 CTCCCTCTCTCTCTCTGTCTCT 59.226 54.545 0.00 0.00 0.00 3.10
5477 7030 2.771943 TCCCTCTCTCTCTCTGTCTCTC 59.228 54.545 0.00 0.00 0.00 3.20
5478 7031 2.158755 CCCTCTCTCTCTCTGTCTCTCC 60.159 59.091 0.00 0.00 0.00 3.71
5479 7032 2.158755 CCTCTCTCTCTCTGTCTCTCCC 60.159 59.091 0.00 0.00 0.00 4.30
5480 7033 2.774234 CTCTCTCTCTCTGTCTCTCCCT 59.226 54.545 0.00 0.00 0.00 4.20
5481 7034 2.771943 TCTCTCTCTCTGTCTCTCCCTC 59.228 54.545 0.00 0.00 0.00 4.30
5482 7035 1.843851 TCTCTCTCTGTCTCTCCCTCC 59.156 57.143 0.00 0.00 0.00 4.30
5483 7036 0.923358 TCTCTCTGTCTCTCCCTCCC 59.077 60.000 0.00 0.00 0.00 4.30
5484 7037 0.926293 CTCTCTGTCTCTCCCTCCCT 59.074 60.000 0.00 0.00 0.00 4.20
5485 7038 0.923358 TCTCTGTCTCTCCCTCCCTC 59.077 60.000 0.00 0.00 0.00 4.30
5486 7039 0.926293 CTCTGTCTCTCCCTCCCTCT 59.074 60.000 0.00 0.00 0.00 3.69
5487 7040 0.923358 TCTGTCTCTCCCTCCCTCTC 59.077 60.000 0.00 0.00 0.00 3.20
5488 7041 0.926293 CTGTCTCTCCCTCCCTCTCT 59.074 60.000 0.00 0.00 0.00 3.10
5489 7042 0.923358 TGTCTCTCCCTCCCTCTCTC 59.077 60.000 0.00 0.00 0.00 3.20
5490 7043 1.222567 GTCTCTCCCTCCCTCTCTCT 58.777 60.000 0.00 0.00 0.00 3.10
5491 7044 1.143073 GTCTCTCCCTCCCTCTCTCTC 59.857 61.905 0.00 0.00 0.00 3.20
5492 7045 1.010793 TCTCTCCCTCCCTCTCTCTCT 59.989 57.143 0.00 0.00 0.00 3.10
5493 7046 1.421646 CTCTCCCTCCCTCTCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
5494 7047 1.010793 TCTCCCTCCCTCTCTCTCTCT 59.989 57.143 0.00 0.00 0.00 3.10
5495 7048 1.421646 CTCCCTCCCTCTCTCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
5496 7049 1.010793 TCCCTCCCTCTCTCTCTCTCT 59.989 57.143 0.00 0.00 0.00 3.10
5497 7050 1.143684 CCCTCCCTCTCTCTCTCTCTG 59.856 61.905 0.00 0.00 0.00 3.35
5498 7051 1.846439 CCTCCCTCTCTCTCTCTCTGT 59.154 57.143 0.00 0.00 0.00 3.41
5499 7052 2.421952 CCTCCCTCTCTCTCTCTCTGTG 60.422 59.091 0.00 0.00 0.00 3.66
5500 7053 2.239654 CTCCCTCTCTCTCTCTCTGTGT 59.760 54.545 0.00 0.00 0.00 3.72
5501 7054 2.026356 TCCCTCTCTCTCTCTCTGTGTG 60.026 54.545 0.00 0.00 0.00 3.82
5502 7055 2.290896 CCCTCTCTCTCTCTCTGTGTGT 60.291 54.545 0.00 0.00 0.00 3.72
5503 7056 2.749076 CCTCTCTCTCTCTCTGTGTGTG 59.251 54.545 0.00 0.00 0.00 3.82
5504 7057 3.411446 CTCTCTCTCTCTCTGTGTGTGT 58.589 50.000 0.00 0.00 0.00 3.72
5505 7058 3.145286 TCTCTCTCTCTCTGTGTGTGTG 58.855 50.000 0.00 0.00 0.00 3.82
5506 7059 2.884012 CTCTCTCTCTCTGTGTGTGTGT 59.116 50.000 0.00 0.00 0.00 3.72
5578 7131 3.119137 GGCCTATTGCAAGGTTGGTTTAG 60.119 47.826 4.94 0.00 43.89 1.85
5730 7291 4.139420 CGTCTGCTTTGCTCGCGG 62.139 66.667 6.13 0.00 35.10 6.46
5946 7515 5.181433 GCCTGAAGTTCTATTTTTCGAGGTT 59.819 40.000 4.17 0.00 0.00 3.50
5970 7542 9.453325 GTTATCAAGTAGACTGTTGTATAGCTC 57.547 37.037 0.00 0.00 0.00 4.09
6163 7742 6.226787 AGAAGGGCTTTATGATATTCGTCTG 58.773 40.000 0.00 0.00 0.00 3.51
6184 7763 2.485814 GTGGAAGTTGGAACTGATGAGC 59.514 50.000 0.00 0.00 39.66 4.26
6185 7764 2.106338 TGGAAGTTGGAACTGATGAGCA 59.894 45.455 0.00 0.00 39.66 4.26
6212 7791 2.887360 CCAGGATTGGGCAAAGCG 59.113 61.111 0.00 0.00 41.05 4.68
6213 7792 2.182537 CAGGATTGGGCAAAGCGC 59.817 61.111 0.00 0.00 41.94 5.92
6234 7813 3.721706 GCCCCAGGCTGCTACAGT 61.722 66.667 9.56 0.00 46.69 3.55
6235 7814 2.270205 CCCCAGGCTGCTACAGTG 59.730 66.667 9.56 0.00 33.43 3.66
6236 7815 2.437359 CCCAGGCTGCTACAGTGC 60.437 66.667 9.56 0.00 33.43 4.40
6237 7816 2.667418 CCAGGCTGCTACAGTGCT 59.333 61.111 9.56 0.00 33.43 4.40
6238 7817 1.744368 CCAGGCTGCTACAGTGCTG 60.744 63.158 9.56 0.00 33.43 4.41
6243 7822 3.820595 CTGCTACAGTGCTGCTACA 57.179 52.632 0.00 0.00 0.00 2.74
6244 7823 2.084610 CTGCTACAGTGCTGCTACAA 57.915 50.000 0.00 0.00 0.00 2.41
6245 7824 2.625737 CTGCTACAGTGCTGCTACAAT 58.374 47.619 0.00 0.00 0.00 2.71
6246 7825 2.349590 TGCTACAGTGCTGCTACAATG 58.650 47.619 0.00 5.62 41.25 2.82
6248 7827 2.744202 GCTACAGTGCTGCTACAATGTT 59.256 45.455 15.68 3.66 45.81 2.71
6249 7828 3.425359 GCTACAGTGCTGCTACAATGTTG 60.425 47.826 15.68 14.59 45.81 3.33
6250 7829 2.849942 ACAGTGCTGCTACAATGTTGA 58.150 42.857 6.78 0.00 45.81 3.18
6251 7830 3.415212 ACAGTGCTGCTACAATGTTGAT 58.585 40.909 6.78 0.00 45.81 2.57
6252 7831 4.578871 ACAGTGCTGCTACAATGTTGATA 58.421 39.130 6.78 0.00 45.81 2.15
6253 7832 4.393062 ACAGTGCTGCTACAATGTTGATAC 59.607 41.667 6.78 0.00 45.81 2.24
6254 7833 4.392754 CAGTGCTGCTACAATGTTGATACA 59.607 41.667 0.00 0.00 38.95 2.29
6255 7834 5.003160 AGTGCTGCTACAATGTTGATACAA 58.997 37.500 0.00 0.00 37.91 2.41
6256 7835 5.649395 AGTGCTGCTACAATGTTGATACAAT 59.351 36.000 0.00 0.00 37.91 2.71
6257 7836 5.740569 GTGCTGCTACAATGTTGATACAATG 59.259 40.000 0.00 0.00 40.32 2.82
6258 7837 4.736793 GCTGCTACAATGTTGATACAATGC 59.263 41.667 0.00 0.00 38.48 3.56
6259 7838 5.676837 GCTGCTACAATGTTGATACAATGCA 60.677 40.000 0.00 0.00 38.48 3.96
6260 7839 5.639757 TGCTACAATGTTGATACAATGCAC 58.360 37.500 0.00 0.00 38.48 4.57
6261 7840 5.415389 TGCTACAATGTTGATACAATGCACT 59.585 36.000 0.00 0.00 38.48 4.40
6262 7841 5.740569 GCTACAATGTTGATACAATGCACTG 59.259 40.000 0.00 0.00 38.48 3.66
6263 7842 4.487948 ACAATGTTGATACAATGCACTGC 58.512 39.130 0.00 0.00 38.48 4.40
6264 7843 4.219070 ACAATGTTGATACAATGCACTGCT 59.781 37.500 0.00 0.00 38.48 4.24
6265 7844 3.835378 TGTTGATACAATGCACTGCTG 57.165 42.857 0.00 0.00 0.00 4.41
6266 7845 3.410508 TGTTGATACAATGCACTGCTGA 58.589 40.909 0.00 0.00 0.00 4.26
6267 7846 4.011698 TGTTGATACAATGCACTGCTGAT 58.988 39.130 0.00 0.00 0.00 2.90
6268 7847 4.142556 TGTTGATACAATGCACTGCTGATG 60.143 41.667 0.00 1.59 0.00 3.07
6269 7848 3.876341 TGATACAATGCACTGCTGATGA 58.124 40.909 0.00 0.00 0.00 2.92
6270 7849 3.875134 TGATACAATGCACTGCTGATGAG 59.125 43.478 0.00 0.00 0.00 2.90
6285 7864 4.154375 GCTGATGAGTGATGCATATCTTGG 59.846 45.833 0.00 0.00 34.31 3.61
6293 7872 5.762218 AGTGATGCATATCTTGGCTTCTAAC 59.238 40.000 0.00 0.00 35.79 2.34
6331 7910 4.023193 CACCACGCCATTTTTCTCTTAAGT 60.023 41.667 1.63 0.00 0.00 2.24
6336 7915 7.361713 CCACGCCATTTTTCTCTTAAGTCATAA 60.362 37.037 1.63 0.00 0.00 1.90
6350 7929 9.851686 TCTTAAGTCATAATGTTGATAATGGCT 57.148 29.630 1.63 0.00 35.88 4.75
6618 8197 3.980583 CGTATGCCCACCTCGTATT 57.019 52.632 0.00 0.00 0.00 1.89
6619 8198 1.497991 CGTATGCCCACCTCGTATTG 58.502 55.000 0.00 0.00 0.00 1.90
6620 8199 1.202486 CGTATGCCCACCTCGTATTGT 60.202 52.381 0.00 0.00 0.00 2.71
6621 8200 2.034939 CGTATGCCCACCTCGTATTGTA 59.965 50.000 0.00 0.00 0.00 2.41
6622 8201 2.614829 ATGCCCACCTCGTATTGTAC 57.385 50.000 0.00 0.00 0.00 2.90
6623 8202 1.268066 TGCCCACCTCGTATTGTACA 58.732 50.000 0.00 0.00 0.00 2.90
6624 8203 1.206132 TGCCCACCTCGTATTGTACAG 59.794 52.381 0.00 0.00 0.00 2.74
6625 8204 1.935933 CCCACCTCGTATTGTACAGC 58.064 55.000 0.00 0.00 0.00 4.40
6626 8205 1.480954 CCCACCTCGTATTGTACAGCT 59.519 52.381 0.00 0.00 0.00 4.24
6627 8206 2.481449 CCCACCTCGTATTGTACAGCTC 60.481 54.545 0.00 0.00 0.00 4.09
6628 8207 2.427453 CCACCTCGTATTGTACAGCTCT 59.573 50.000 0.00 0.00 0.00 4.09
6629 8208 3.439293 CACCTCGTATTGTACAGCTCTG 58.561 50.000 0.00 0.00 0.00 3.35
6630 8209 2.159226 ACCTCGTATTGTACAGCTCTGC 60.159 50.000 0.00 0.00 0.00 4.26
6631 8210 2.464865 CTCGTATTGTACAGCTCTGCC 58.535 52.381 0.00 0.00 0.00 4.85
6632 8211 1.200483 CGTATTGTACAGCTCTGCCG 58.800 55.000 0.00 0.00 0.00 5.69
6633 8212 1.571919 GTATTGTACAGCTCTGCCGG 58.428 55.000 0.00 0.00 0.00 6.13
6634 8213 0.464036 TATTGTACAGCTCTGCCGGG 59.536 55.000 2.18 0.00 0.00 5.73
6635 8214 2.876368 ATTGTACAGCTCTGCCGGGC 62.876 60.000 13.32 13.32 0.00 6.13
6636 8215 4.082523 GTACAGCTCTGCCGGGCA 62.083 66.667 22.39 22.39 36.92 5.36
6637 8216 3.083349 TACAGCTCTGCCGGGCAT 61.083 61.111 24.10 9.13 38.13 4.40
6638 8217 1.760480 TACAGCTCTGCCGGGCATA 60.760 57.895 24.10 15.02 38.13 3.14
6639 8218 2.028125 TACAGCTCTGCCGGGCATAC 62.028 60.000 24.10 14.64 38.13 2.39
6640 8219 4.227134 AGCTCTGCCGGGCATACG 62.227 66.667 24.10 11.51 38.13 3.06
6641 8220 4.530857 GCTCTGCCGGGCATACGT 62.531 66.667 24.10 0.00 38.13 3.57
6642 8221 3.125607 CTCTGCCGGGCATACGTA 58.874 61.111 24.10 0.00 38.13 3.57
6643 8222 1.666011 CTCTGCCGGGCATACGTAT 59.334 57.895 24.10 1.14 38.13 3.06
6644 8223 0.885879 CTCTGCCGGGCATACGTATA 59.114 55.000 24.10 0.00 38.13 1.47
6645 8224 0.599558 TCTGCCGGGCATACGTATAC 59.400 55.000 24.10 1.95 38.13 1.47
6646 8225 0.389426 CTGCCGGGCATACGTATACC 60.389 60.000 24.10 15.46 38.13 2.73
6647 8226 1.444895 GCCGGGCATACGTATACCG 60.445 63.158 29.62 29.62 43.89 4.02
6648 8227 1.444895 CCGGGCATACGTATACCGC 60.445 63.158 30.51 20.81 42.99 5.68
6649 8228 1.798725 CGGGCATACGTATACCGCG 60.799 63.158 27.29 24.32 41.42 6.46
6650 8229 2.090524 GGGCATACGTATACCGCGC 61.091 63.158 16.89 15.71 41.42 6.86
6651 8230 2.430942 GGCATACGTATACCGCGCG 61.431 63.158 25.67 25.67 41.42 6.86
6652 8231 3.051171 GCATACGTATACCGCGCGC 62.051 63.158 27.36 23.91 41.42 6.86
6653 8232 1.726672 CATACGTATACCGCGCGCA 60.727 57.895 32.61 15.21 41.42 6.09
6654 8233 1.068832 CATACGTATACCGCGCGCAT 61.069 55.000 32.61 21.39 41.42 4.73
6655 8234 1.068832 ATACGTATACCGCGCGCATG 61.069 55.000 32.61 23.41 41.42 4.06
6656 8235 2.115533 TACGTATACCGCGCGCATGA 62.116 55.000 32.61 15.41 41.42 3.07
6657 8236 2.297195 CGTATACCGCGCGCATGAA 61.297 57.895 32.61 13.55 0.00 2.57
6658 8237 1.813212 CGTATACCGCGCGCATGAAA 61.813 55.000 32.61 14.77 0.00 2.69
6659 8238 0.302288 GTATACCGCGCGCATGAAAA 59.698 50.000 32.61 10.00 0.00 2.29
6660 8239 1.007580 TATACCGCGCGCATGAAAAA 58.992 45.000 32.61 8.83 0.00 1.94
6686 8265 4.962836 CCATGATCTGGGCCCGCC 62.963 72.222 19.37 6.43 41.82 6.13
6696 8275 4.570874 GGCCCGCCCCATCTTCTC 62.571 72.222 0.00 0.00 0.00 2.87
6697 8276 4.918201 GCCCGCCCCATCTTCTCG 62.918 72.222 0.00 0.00 0.00 4.04
6698 8277 4.918201 CCCGCCCCATCTTCTCGC 62.918 72.222 0.00 0.00 0.00 5.03
6699 8278 4.918201 CCGCCCCATCTTCTCGCC 62.918 72.222 0.00 0.00 0.00 5.54
6700 8279 4.918201 CGCCCCATCTTCTCGCCC 62.918 72.222 0.00 0.00 0.00 6.13
6701 8280 4.918201 GCCCCATCTTCTCGCCCG 62.918 72.222 0.00 0.00 0.00 6.13
6702 8281 4.918201 CCCCATCTTCTCGCCCGC 62.918 72.222 0.00 0.00 0.00 6.13
6703 8282 4.918201 CCCATCTTCTCGCCCGCC 62.918 72.222 0.00 0.00 0.00 6.13
6704 8283 4.918201 CCATCTTCTCGCCCGCCC 62.918 72.222 0.00 0.00 0.00 6.13
6705 8284 4.161295 CATCTTCTCGCCCGCCCA 62.161 66.667 0.00 0.00 0.00 5.36
6706 8285 3.164269 ATCTTCTCGCCCGCCCAT 61.164 61.111 0.00 0.00 0.00 4.00
6707 8286 3.170490 ATCTTCTCGCCCGCCCATC 62.170 63.158 0.00 0.00 0.00 3.51
6708 8287 3.854669 CTTCTCGCCCGCCCATCT 61.855 66.667 0.00 0.00 0.00 2.90
6709 8288 2.443203 TTCTCGCCCGCCCATCTA 60.443 61.111 0.00 0.00 0.00 1.98
6710 8289 2.427540 CTTCTCGCCCGCCCATCTAG 62.428 65.000 0.00 0.00 0.00 2.43
6711 8290 3.227276 CTCGCCCGCCCATCTAGT 61.227 66.667 0.00 0.00 0.00 2.57
6712 8291 3.214250 CTCGCCCGCCCATCTAGTC 62.214 68.421 0.00 0.00 0.00 2.59
6713 8292 4.647615 CGCCCGCCCATCTAGTCG 62.648 72.222 0.00 0.00 0.00 4.18
6714 8293 4.971125 GCCCGCCCATCTAGTCGC 62.971 72.222 0.00 0.00 0.00 5.19
6715 8294 4.301027 CCCGCCCATCTAGTCGCC 62.301 72.222 0.00 0.00 0.00 5.54
6716 8295 4.301027 CCGCCCATCTAGTCGCCC 62.301 72.222 0.00 0.00 0.00 6.13
6717 8296 4.647615 CGCCCATCTAGTCGCCCG 62.648 72.222 0.00 0.00 0.00 6.13
6718 8297 4.971125 GCCCATCTAGTCGCCCGC 62.971 72.222 0.00 0.00 0.00 6.13
6719 8298 4.301027 CCCATCTAGTCGCCCGCC 62.301 72.222 0.00 0.00 0.00 6.13
6720 8299 4.301027 CCATCTAGTCGCCCGCCC 62.301 72.222 0.00 0.00 0.00 6.13
6721 8300 4.647615 CATCTAGTCGCCCGCCCG 62.648 72.222 0.00 0.00 0.00 6.13
6739 8318 2.828877 CCGCTAATCACGGTATTTCCA 58.171 47.619 0.00 0.00 45.70 3.53
6740 8319 2.800544 CCGCTAATCACGGTATTTCCAG 59.199 50.000 0.00 0.00 45.70 3.86
6741 8320 3.491964 CCGCTAATCACGGTATTTCCAGA 60.492 47.826 0.00 0.00 45.70 3.86
6742 8321 3.736252 CGCTAATCACGGTATTTCCAGAG 59.264 47.826 0.00 0.00 35.57 3.35
6743 8322 4.694339 GCTAATCACGGTATTTCCAGAGT 58.306 43.478 0.00 0.00 35.57 3.24
6744 8323 5.116882 GCTAATCACGGTATTTCCAGAGTT 58.883 41.667 0.00 0.00 35.57 3.01
6745 8324 5.006746 GCTAATCACGGTATTTCCAGAGTTG 59.993 44.000 0.00 0.00 35.57 3.16
6746 8325 3.328382 TCACGGTATTTCCAGAGTTGG 57.672 47.619 0.00 0.00 46.49 3.77
6747 8326 1.737793 CACGGTATTTCCAGAGTTGGC 59.262 52.381 0.00 0.00 44.63 4.52
6748 8327 1.006832 CGGTATTTCCAGAGTTGGCG 58.993 55.000 0.00 0.00 44.63 5.69
6749 8328 1.404986 CGGTATTTCCAGAGTTGGCGA 60.405 52.381 0.00 0.00 44.63 5.54
6750 8329 2.741878 CGGTATTTCCAGAGTTGGCGAT 60.742 50.000 0.00 0.00 44.63 4.58
6751 8330 2.872858 GGTATTTCCAGAGTTGGCGATC 59.127 50.000 0.00 0.00 44.63 3.69
6752 8331 1.656652 ATTTCCAGAGTTGGCGATCG 58.343 50.000 11.69 11.69 44.63 3.69
6753 8332 1.019278 TTTCCAGAGTTGGCGATCGC 61.019 55.000 31.52 31.52 44.63 4.58
6878 8457 4.796231 GTCGCCGCATCTCACCGT 62.796 66.667 0.00 0.00 0.00 4.83
6879 8458 4.492160 TCGCCGCATCTCACCGTC 62.492 66.667 0.00 0.00 0.00 4.79
6882 8461 3.770040 CCGCATCTCACCGTCCCA 61.770 66.667 0.00 0.00 0.00 4.37
6883 8462 2.264480 CGCATCTCACCGTCCCAA 59.736 61.111 0.00 0.00 0.00 4.12
6884 8463 2.100631 CGCATCTCACCGTCCCAAC 61.101 63.158 0.00 0.00 0.00 3.77
6885 8464 1.296715 GCATCTCACCGTCCCAACT 59.703 57.895 0.00 0.00 0.00 3.16
6886 8465 0.321653 GCATCTCACCGTCCCAACTT 60.322 55.000 0.00 0.00 0.00 2.66
6887 8466 1.726853 CATCTCACCGTCCCAACTTC 58.273 55.000 0.00 0.00 0.00 3.01
6888 8467 1.001974 CATCTCACCGTCCCAACTTCA 59.998 52.381 0.00 0.00 0.00 3.02
6889 8468 0.391597 TCTCACCGTCCCAACTTCAC 59.608 55.000 0.00 0.00 0.00 3.18
6890 8469 0.602905 CTCACCGTCCCAACTTCACC 60.603 60.000 0.00 0.00 0.00 4.02
6891 8470 1.599797 CACCGTCCCAACTTCACCC 60.600 63.158 0.00 0.00 0.00 4.61
6892 8471 2.358247 CCGTCCCAACTTCACCCG 60.358 66.667 0.00 0.00 0.00 5.28
6893 8472 2.424302 CGTCCCAACTTCACCCGT 59.576 61.111 0.00 0.00 0.00 5.28
6894 8473 1.666872 CGTCCCAACTTCACCCGTC 60.667 63.158 0.00 0.00 0.00 4.79
6895 8474 1.666872 GTCCCAACTTCACCCGTCG 60.667 63.158 0.00 0.00 0.00 5.12
6896 8475 3.047877 CCCAACTTCACCCGTCGC 61.048 66.667 0.00 0.00 0.00 5.19
6897 8476 3.047877 CCAACTTCACCCGTCGCC 61.048 66.667 0.00 0.00 0.00 5.54
6898 8477 3.411351 CAACTTCACCCGTCGCCG 61.411 66.667 0.00 0.00 0.00 6.46
6909 8488 4.796231 GTCGCCGCATCTCACCGT 62.796 66.667 0.00 0.00 0.00 4.83
6910 8489 4.492160 TCGCCGCATCTCACCGTC 62.492 66.667 0.00 0.00 0.00 4.79
6913 8492 3.770040 CCGCATCTCACCGTCCCA 61.770 66.667 0.00 0.00 0.00 4.37
6914 8493 2.264480 CGCATCTCACCGTCCCAA 59.736 61.111 0.00 0.00 0.00 4.12
6915 8494 2.100631 CGCATCTCACCGTCCCAAC 61.101 63.158 0.00 0.00 0.00 3.77
6940 8519 4.796231 GTCGCCGCATCTCACCGT 62.796 66.667 0.00 0.00 0.00 4.83
6941 8520 4.492160 TCGCCGCATCTCACCGTC 62.492 66.667 0.00 0.00 0.00 4.79
6943 8522 4.796231 GCCGCATCTCACCGTCGT 62.796 66.667 0.00 0.00 0.00 4.34
6944 8523 2.579787 CCGCATCTCACCGTCGTC 60.580 66.667 0.00 0.00 0.00 4.20
6945 8524 2.579787 CGCATCTCACCGTCGTCC 60.580 66.667 0.00 0.00 0.00 4.79
6946 8525 2.579787 GCATCTCACCGTCGTCCG 60.580 66.667 0.00 0.00 0.00 4.79
6947 8526 3.047718 GCATCTCACCGTCGTCCGA 62.048 63.158 0.00 0.00 39.56 4.55
6948 8527 1.226323 CATCTCACCGTCGTCCGAC 60.226 63.158 9.69 9.69 41.40 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2558 3281 3.480470 CAGAAGAACAAAAGGCTCCTGA 58.520 45.455 3.04 0.00 0.00 3.86
3405 4631 6.866770 GGTCTAACCTTTTCATAAAAAGTGCC 59.133 38.462 0.43 0.00 46.60 5.01
3483 4716 6.366332 ACTCTGCTTTCACGTTGTAATCTAAG 59.634 38.462 0.00 0.00 0.00 2.18
3573 4808 4.099266 CAGACCTCCAAAATGACCACAAAA 59.901 41.667 0.00 0.00 0.00 2.44
3835 5169 8.734218 TTTAGGTCAATACTTTACACACAACA 57.266 30.769 0.00 0.00 0.00 3.33
3957 5291 2.655090 TGTGGCCACAATCTCAGAAA 57.345 45.000 36.10 8.77 38.56 2.52
4076 5410 7.102346 CCAAAAAGATAATGTGTTGGGCATAA 58.898 34.615 0.00 0.00 33.40 1.90
4216 5550 6.183360 GCTAGGCAGAAAACTATTGCATACAA 60.183 38.462 0.00 0.00 39.54 2.41
4610 5967 0.904865 TCAAGGGGAGACGTGATGCT 60.905 55.000 0.00 0.00 0.00 3.79
4810 6332 4.142902 GGTCATGAACGTCAACCAATACAG 60.143 45.833 0.00 0.00 29.77 2.74
5453 7006 2.774234 AGACAGAGAGAGAGAGGGAGAG 59.226 54.545 0.00 0.00 0.00 3.20
5454 7007 2.771943 GAGACAGAGAGAGAGAGGGAGA 59.228 54.545 0.00 0.00 0.00 3.71
5455 7008 2.774234 AGAGACAGAGAGAGAGAGGGAG 59.226 54.545 0.00 0.00 0.00 4.30
5456 7009 2.771943 GAGAGACAGAGAGAGAGAGGGA 59.228 54.545 0.00 0.00 0.00 4.20
5457 7010 2.158755 GGAGAGACAGAGAGAGAGAGGG 60.159 59.091 0.00 0.00 0.00 4.30
5458 7011 2.158755 GGGAGAGACAGAGAGAGAGAGG 60.159 59.091 0.00 0.00 0.00 3.69
5459 7012 2.774234 AGGGAGAGACAGAGAGAGAGAG 59.226 54.545 0.00 0.00 0.00 3.20
5460 7013 2.771943 GAGGGAGAGACAGAGAGAGAGA 59.228 54.545 0.00 0.00 0.00 3.10
5461 7014 2.158755 GGAGGGAGAGACAGAGAGAGAG 60.159 59.091 0.00 0.00 0.00 3.20
5462 7015 1.843851 GGAGGGAGAGACAGAGAGAGA 59.156 57.143 0.00 0.00 0.00 3.10
5463 7016 1.133792 GGGAGGGAGAGACAGAGAGAG 60.134 61.905 0.00 0.00 0.00 3.20
5464 7017 0.923358 GGGAGGGAGAGACAGAGAGA 59.077 60.000 0.00 0.00 0.00 3.10
5465 7018 0.926293 AGGGAGGGAGAGACAGAGAG 59.074 60.000 0.00 0.00 0.00 3.20
5466 7019 0.923358 GAGGGAGGGAGAGACAGAGA 59.077 60.000 0.00 0.00 0.00 3.10
5467 7020 0.926293 AGAGGGAGGGAGAGACAGAG 59.074 60.000 0.00 0.00 0.00 3.35
5468 7021 0.923358 GAGAGGGAGGGAGAGACAGA 59.077 60.000 0.00 0.00 0.00 3.41
5469 7022 0.926293 AGAGAGGGAGGGAGAGACAG 59.074 60.000 0.00 0.00 0.00 3.51
5470 7023 0.923358 GAGAGAGGGAGGGAGAGACA 59.077 60.000 0.00 0.00 0.00 3.41
5471 7024 1.143073 GAGAGAGAGGGAGGGAGAGAC 59.857 61.905 0.00 0.00 0.00 3.36
5472 7025 1.010793 AGAGAGAGAGGGAGGGAGAGA 59.989 57.143 0.00 0.00 0.00 3.10
5473 7026 1.421646 GAGAGAGAGAGGGAGGGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
5474 7027 1.010793 AGAGAGAGAGAGGGAGGGAGA 59.989 57.143 0.00 0.00 0.00 3.71
5475 7028 1.421646 GAGAGAGAGAGAGGGAGGGAG 59.578 61.905 0.00 0.00 0.00 4.30
5476 7029 1.010793 AGAGAGAGAGAGAGGGAGGGA 59.989 57.143 0.00 0.00 0.00 4.20
5477 7030 1.143684 CAGAGAGAGAGAGAGGGAGGG 59.856 61.905 0.00 0.00 0.00 4.30
5478 7031 1.846439 ACAGAGAGAGAGAGAGGGAGG 59.154 57.143 0.00 0.00 0.00 4.30
5479 7032 2.239654 ACACAGAGAGAGAGAGAGGGAG 59.760 54.545 0.00 0.00 0.00 4.30
5480 7033 2.026356 CACACAGAGAGAGAGAGAGGGA 60.026 54.545 0.00 0.00 0.00 4.20
5481 7034 2.290896 ACACACAGAGAGAGAGAGAGGG 60.291 54.545 0.00 0.00 0.00 4.30
5482 7035 2.749076 CACACACAGAGAGAGAGAGAGG 59.251 54.545 0.00 0.00 0.00 3.69
5483 7036 3.189080 CACACACACAGAGAGAGAGAGAG 59.811 52.174 0.00 0.00 0.00 3.20
5484 7037 3.145286 CACACACACAGAGAGAGAGAGA 58.855 50.000 0.00 0.00 0.00 3.10
5485 7038 2.884012 ACACACACACAGAGAGAGAGAG 59.116 50.000 0.00 0.00 0.00 3.20
5486 7039 2.620585 CACACACACACAGAGAGAGAGA 59.379 50.000 0.00 0.00 0.00 3.10
5487 7040 2.360483 ACACACACACACAGAGAGAGAG 59.640 50.000 0.00 0.00 0.00 3.20
5488 7041 2.099756 CACACACACACACAGAGAGAGA 59.900 50.000 0.00 0.00 0.00 3.10
5489 7042 2.159184 ACACACACACACACAGAGAGAG 60.159 50.000 0.00 0.00 0.00 3.20
5490 7043 1.824852 ACACACACACACACAGAGAGA 59.175 47.619 0.00 0.00 0.00 3.10
5491 7044 1.929169 CACACACACACACACAGAGAG 59.071 52.381 0.00 0.00 0.00 3.20
5492 7045 1.275010 ACACACACACACACACAGAGA 59.725 47.619 0.00 0.00 0.00 3.10
5493 7046 1.394572 CACACACACACACACACAGAG 59.605 52.381 0.00 0.00 0.00 3.35
5494 7047 1.270571 ACACACACACACACACACAGA 60.271 47.619 0.00 0.00 0.00 3.41
5495 7048 1.136000 CACACACACACACACACACAG 60.136 52.381 0.00 0.00 0.00 3.66
5496 7049 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5497 7050 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5498 7051 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5499 7052 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5500 7053 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5501 7054 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5502 7055 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5503 7056 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5504 7057 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5505 7058 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5506 7059 1.598882 AACACACACACACACACACA 58.401 45.000 0.00 0.00 0.00 3.72
5578 7131 4.459337 AGGCAAATTAAGTAACCAGAGCAC 59.541 41.667 0.00 0.00 0.00 4.40
5730 7291 0.535335 TATGACCCACTTGTCCTCGC 59.465 55.000 0.00 0.00 34.25 5.03
5946 7515 8.747538 TGAGCTATACAACAGTCTACTTGATA 57.252 34.615 0.00 0.00 0.00 2.15
6163 7742 2.485814 GCTCATCAGTTCCAACTTCCAC 59.514 50.000 0.00 0.00 37.08 4.02
6195 7774 2.887360 CGCTTTGCCCAATCCTGG 59.113 61.111 0.00 0.00 43.10 4.45
6196 7775 2.182537 GCGCTTTGCCCAATCCTG 59.817 61.111 0.00 0.00 37.76 3.86
6197 7776 2.283101 TGCGCTTTGCCCAATCCT 60.283 55.556 9.73 0.00 45.60 3.24
6198 7777 2.182537 CTGCGCTTTGCCCAATCC 59.817 61.111 9.73 0.00 45.60 3.01
6199 7778 2.182537 CCTGCGCTTTGCCCAATC 59.817 61.111 9.73 0.00 45.60 2.67
6200 7779 3.384532 CCCTGCGCTTTGCCCAAT 61.385 61.111 9.73 0.00 45.60 3.16
6218 7797 2.270205 CACTGTAGCAGCCTGGGG 59.730 66.667 0.00 0.00 34.37 4.96
6219 7798 2.437359 GCACTGTAGCAGCCTGGG 60.437 66.667 0.00 0.00 34.37 4.45
6220 7799 1.744368 CAGCACTGTAGCAGCCTGG 60.744 63.158 0.00 0.00 34.37 4.45
6221 7800 2.396955 GCAGCACTGTAGCAGCCTG 61.397 63.158 10.87 10.87 40.64 4.85
6222 7801 1.260538 TAGCAGCACTGTAGCAGCCT 61.261 55.000 13.01 6.47 46.72 4.58
6223 7802 1.086634 GTAGCAGCACTGTAGCAGCC 61.087 60.000 13.01 0.64 46.72 4.85
6224 7803 0.390340 TGTAGCAGCACTGTAGCAGC 60.390 55.000 10.09 10.09 45.99 5.25
6225 7804 2.084610 TTGTAGCAGCACTGTAGCAG 57.915 50.000 0.00 0.00 37.52 4.24
6226 7805 2.289631 ACATTGTAGCAGCACTGTAGCA 60.290 45.455 0.00 0.00 36.85 3.49
6227 7806 2.350522 ACATTGTAGCAGCACTGTAGC 58.649 47.619 0.00 0.00 31.82 3.58
6228 7807 3.996363 TCAACATTGTAGCAGCACTGTAG 59.004 43.478 0.00 0.00 32.30 2.74
6229 7808 4.001618 TCAACATTGTAGCAGCACTGTA 57.998 40.909 0.00 0.00 32.30 2.74
6230 7809 2.849942 TCAACATTGTAGCAGCACTGT 58.150 42.857 0.00 0.00 34.42 3.55
6231 7810 4.392754 TGTATCAACATTGTAGCAGCACTG 59.607 41.667 0.00 0.00 0.00 3.66
6232 7811 4.578871 TGTATCAACATTGTAGCAGCACT 58.421 39.130 0.00 0.00 0.00 4.40
6233 7812 4.944962 TGTATCAACATTGTAGCAGCAC 57.055 40.909 0.00 0.00 0.00 4.40
6234 7813 5.676837 GCATTGTATCAACATTGTAGCAGCA 60.677 40.000 0.00 0.00 38.60 4.41
6235 7814 4.736793 GCATTGTATCAACATTGTAGCAGC 59.263 41.667 0.00 0.00 38.60 5.25
6236 7815 5.740569 GTGCATTGTATCAACATTGTAGCAG 59.259 40.000 0.00 0.00 38.60 4.24
6237 7816 5.415389 AGTGCATTGTATCAACATTGTAGCA 59.585 36.000 0.00 0.00 38.60 3.49
6238 7817 5.740569 CAGTGCATTGTATCAACATTGTAGC 59.259 40.000 0.13 0.00 38.60 3.58
6239 7818 5.740569 GCAGTGCATTGTATCAACATTGTAG 59.259 40.000 11.09 0.00 38.60 2.74
6240 7819 5.415389 AGCAGTGCATTGTATCAACATTGTA 59.585 36.000 19.20 0.00 38.60 2.41
6241 7820 4.219070 AGCAGTGCATTGTATCAACATTGT 59.781 37.500 19.20 0.00 38.60 2.71
6242 7821 4.561213 CAGCAGTGCATTGTATCAACATTG 59.439 41.667 19.20 0.00 39.10 2.82
6243 7822 4.460034 TCAGCAGTGCATTGTATCAACATT 59.540 37.500 19.20 0.00 34.97 2.71
6244 7823 4.011698 TCAGCAGTGCATTGTATCAACAT 58.988 39.130 19.20 0.00 34.97 2.71
6245 7824 3.410508 TCAGCAGTGCATTGTATCAACA 58.589 40.909 19.20 0.00 0.00 3.33
6246 7825 4.095334 TCATCAGCAGTGCATTGTATCAAC 59.905 41.667 19.20 0.00 0.00 3.18
6247 7826 4.263435 TCATCAGCAGTGCATTGTATCAA 58.737 39.130 19.20 0.00 0.00 2.57
6248 7827 3.875134 CTCATCAGCAGTGCATTGTATCA 59.125 43.478 19.20 0.00 0.00 2.15
6249 7828 3.875727 ACTCATCAGCAGTGCATTGTATC 59.124 43.478 19.20 0.00 0.00 2.24
6250 7829 3.626217 CACTCATCAGCAGTGCATTGTAT 59.374 43.478 19.20 0.00 35.15 2.29
6251 7830 3.004862 CACTCATCAGCAGTGCATTGTA 58.995 45.455 19.20 0.00 35.15 2.41
6252 7831 1.810755 CACTCATCAGCAGTGCATTGT 59.189 47.619 19.20 4.25 35.15 2.71
6253 7832 2.081462 TCACTCATCAGCAGTGCATTG 58.919 47.619 19.20 11.45 41.04 2.82
6254 7833 2.484742 TCACTCATCAGCAGTGCATT 57.515 45.000 19.20 0.00 41.04 3.56
6255 7834 2.289565 CATCACTCATCAGCAGTGCAT 58.710 47.619 19.20 0.00 41.04 3.96
6256 7835 1.734163 CATCACTCATCAGCAGTGCA 58.266 50.000 19.20 0.00 41.04 4.57
6257 7836 0.377554 GCATCACTCATCAGCAGTGC 59.622 55.000 7.13 7.13 41.04 4.40
6258 7837 1.734163 TGCATCACTCATCAGCAGTG 58.266 50.000 0.00 0.00 42.40 3.66
6259 7838 2.711978 ATGCATCACTCATCAGCAGT 57.288 45.000 0.00 0.00 38.75 4.40
6260 7839 4.570930 AGATATGCATCACTCATCAGCAG 58.429 43.478 0.19 0.00 38.75 4.24
6261 7840 4.618920 AGATATGCATCACTCATCAGCA 57.381 40.909 0.19 0.00 39.79 4.41
6262 7841 4.154375 CCAAGATATGCATCACTCATCAGC 59.846 45.833 0.19 0.00 33.21 4.26
6263 7842 4.154375 GCCAAGATATGCATCACTCATCAG 59.846 45.833 0.19 0.00 33.21 2.90
6264 7843 4.070009 GCCAAGATATGCATCACTCATCA 58.930 43.478 0.19 0.00 33.21 3.07
6265 7844 4.325119 AGCCAAGATATGCATCACTCATC 58.675 43.478 0.19 0.00 33.21 2.92
6266 7845 4.368565 AGCCAAGATATGCATCACTCAT 57.631 40.909 0.19 0.00 33.21 2.90
6267 7846 3.851458 AGCCAAGATATGCATCACTCA 57.149 42.857 0.19 0.00 33.21 3.41
6268 7847 4.387598 AGAAGCCAAGATATGCATCACTC 58.612 43.478 0.19 0.00 33.21 3.51
6269 7848 4.434545 AGAAGCCAAGATATGCATCACT 57.565 40.909 0.19 0.42 33.21 3.41
6270 7849 5.333645 CGTTAGAAGCCAAGATATGCATCAC 60.334 44.000 0.19 0.00 33.21 3.06
6285 7864 5.028375 GCCATTAAATGTGACGTTAGAAGC 58.972 41.667 0.00 0.00 0.00 3.86
6293 7872 2.727607 CGTGGTGCCATTAAATGTGACG 60.728 50.000 0.00 0.00 0.00 4.35
6600 8179 1.202486 ACAATACGAGGTGGGCATACG 60.202 52.381 0.00 0.00 0.00 3.06
6601 8180 2.614829 ACAATACGAGGTGGGCATAC 57.385 50.000 0.00 0.00 0.00 2.39
6602 8181 3.032459 TGTACAATACGAGGTGGGCATA 58.968 45.455 0.00 0.00 0.00 3.14
6603 8182 1.834896 TGTACAATACGAGGTGGGCAT 59.165 47.619 0.00 0.00 0.00 4.40
6604 8183 1.206132 CTGTACAATACGAGGTGGGCA 59.794 52.381 0.00 0.00 0.00 5.36
6605 8184 1.935933 CTGTACAATACGAGGTGGGC 58.064 55.000 0.00 0.00 0.00 5.36
6606 8185 1.480954 AGCTGTACAATACGAGGTGGG 59.519 52.381 0.00 0.00 0.00 4.61
6607 8186 2.427453 AGAGCTGTACAATACGAGGTGG 59.573 50.000 0.00 0.00 0.00 4.61
6608 8187 3.439293 CAGAGCTGTACAATACGAGGTG 58.561 50.000 0.00 0.00 0.00 4.00
6609 8188 2.159226 GCAGAGCTGTACAATACGAGGT 60.159 50.000 0.00 0.00 0.00 3.85
6610 8189 2.464865 GCAGAGCTGTACAATACGAGG 58.535 52.381 0.00 0.00 0.00 4.63
6611 8190 2.464865 GGCAGAGCTGTACAATACGAG 58.535 52.381 0.00 0.00 0.00 4.18
6612 8191 1.202256 CGGCAGAGCTGTACAATACGA 60.202 52.381 0.00 0.00 0.00 3.43
6613 8192 1.200483 CGGCAGAGCTGTACAATACG 58.800 55.000 0.00 0.00 0.00 3.06
6614 8193 1.571919 CCGGCAGAGCTGTACAATAC 58.428 55.000 0.00 0.00 32.22 1.89
6615 8194 0.464036 CCCGGCAGAGCTGTACAATA 59.536 55.000 0.00 0.00 32.22 1.90
6616 8195 1.221840 CCCGGCAGAGCTGTACAAT 59.778 57.895 0.00 0.00 32.22 2.71
6617 8196 2.662596 CCCGGCAGAGCTGTACAA 59.337 61.111 0.00 0.00 32.22 2.41
6618 8197 4.082523 GCCCGGCAGAGCTGTACA 62.083 66.667 3.91 0.00 32.22 2.90
6619 8198 2.028125 TATGCCCGGCAGAGCTGTAC 62.028 60.000 18.96 0.00 43.65 2.90
6620 8199 1.760480 TATGCCCGGCAGAGCTGTA 60.760 57.895 18.96 0.81 43.65 2.74
6621 8200 3.083349 TATGCCCGGCAGAGCTGT 61.083 61.111 18.96 1.89 43.65 4.40
6622 8201 2.590007 GTATGCCCGGCAGAGCTG 60.590 66.667 18.96 0.00 43.65 4.24
6623 8202 4.227134 CGTATGCCCGGCAGAGCT 62.227 66.667 18.96 3.11 43.65 4.09
6624 8203 2.436087 ATACGTATGCCCGGCAGAGC 62.436 60.000 18.96 9.18 43.65 4.09
6625 8204 0.885879 TATACGTATGCCCGGCAGAG 59.114 55.000 18.96 13.39 43.65 3.35
6626 8205 0.599558 GTATACGTATGCCCGGCAGA 59.400 55.000 18.96 11.04 43.65 4.26
6627 8206 0.389426 GGTATACGTATGCCCGGCAG 60.389 60.000 27.01 6.93 43.65 4.85
6628 8207 1.667151 GGTATACGTATGCCCGGCA 59.333 57.895 27.01 16.17 44.86 5.69
6629 8208 1.444895 CGGTATACGTATGCCCGGC 60.445 63.158 29.76 1.04 35.33 6.13
6630 8209 1.444895 GCGGTATACGTATGCCCGG 60.445 63.158 31.97 22.98 46.52 5.73
6631 8210 1.798725 CGCGGTATACGTATGCCCG 60.799 63.158 29.76 29.60 46.52 6.13
6632 8211 2.090524 GCGCGGTATACGTATGCCC 61.091 63.158 29.76 22.36 46.52 5.36
6633 8212 2.430942 CGCGCGGTATACGTATGCC 61.431 63.158 27.34 27.34 46.52 4.40
6634 8213 3.051171 GCGCGCGGTATACGTATGC 62.051 63.158 33.06 16.38 46.52 3.14
6635 8214 1.068832 ATGCGCGCGGTATACGTATG 61.069 55.000 33.06 2.68 46.52 2.39
6636 8215 1.068832 CATGCGCGCGGTATACGTAT 61.069 55.000 33.06 13.54 46.52 3.06
6637 8216 1.726672 CATGCGCGCGGTATACGTA 60.727 57.895 33.06 5.35 46.52 3.57
6638 8217 2.940250 TTCATGCGCGCGGTATACGT 62.940 55.000 33.06 12.87 46.52 3.57
6640 8219 0.302288 TTTTCATGCGCGCGGTATAC 59.698 50.000 33.06 15.04 0.00 1.47
6641 8220 1.007580 TTTTTCATGCGCGCGGTATA 58.992 45.000 33.06 8.89 0.00 1.47
6642 8221 1.797441 TTTTTCATGCGCGCGGTAT 59.203 47.368 33.06 12.08 0.00 2.73
6643 8222 3.254947 TTTTTCATGCGCGCGGTA 58.745 50.000 33.06 9.80 0.00 4.02
6679 8258 4.570874 GAGAAGATGGGGCGGGCC 62.571 72.222 13.01 13.01 0.00 5.80
6680 8259 4.918201 CGAGAAGATGGGGCGGGC 62.918 72.222 0.00 0.00 0.00 6.13
6681 8260 4.918201 GCGAGAAGATGGGGCGGG 62.918 72.222 0.00 0.00 0.00 6.13
6682 8261 4.918201 GGCGAGAAGATGGGGCGG 62.918 72.222 0.00 0.00 0.00 6.13
6683 8262 4.918201 GGGCGAGAAGATGGGGCG 62.918 72.222 0.00 0.00 0.00 6.13
6684 8263 4.918201 CGGGCGAGAAGATGGGGC 62.918 72.222 0.00 0.00 0.00 5.80
6685 8264 4.918201 GCGGGCGAGAAGATGGGG 62.918 72.222 0.00 0.00 0.00 4.96
6686 8265 4.918201 GGCGGGCGAGAAGATGGG 62.918 72.222 0.00 0.00 0.00 4.00
6687 8266 4.918201 GGGCGGGCGAGAAGATGG 62.918 72.222 0.00 0.00 0.00 3.51
6688 8267 3.466791 ATGGGCGGGCGAGAAGATG 62.467 63.158 0.00 0.00 0.00 2.90
6689 8268 3.164269 ATGGGCGGGCGAGAAGAT 61.164 61.111 0.00 0.00 0.00 2.40
6690 8269 2.921853 TAGATGGGCGGGCGAGAAGA 62.922 60.000 0.00 0.00 0.00 2.87
6691 8270 2.427540 CTAGATGGGCGGGCGAGAAG 62.428 65.000 0.00 0.00 0.00 2.85
6692 8271 2.443203 TAGATGGGCGGGCGAGAA 60.443 61.111 0.00 0.00 0.00 2.87
6693 8272 2.912542 CTAGATGGGCGGGCGAGA 60.913 66.667 0.00 0.00 0.00 4.04
6694 8273 3.214250 GACTAGATGGGCGGGCGAG 62.214 68.421 0.00 0.00 0.00 5.03
6695 8274 3.224324 GACTAGATGGGCGGGCGA 61.224 66.667 0.00 0.00 0.00 5.54
6696 8275 4.647615 CGACTAGATGGGCGGGCG 62.648 72.222 0.00 0.00 0.00 6.13
6697 8276 4.971125 GCGACTAGATGGGCGGGC 62.971 72.222 0.00 0.00 0.00 6.13
6698 8277 4.301027 GGCGACTAGATGGGCGGG 62.301 72.222 0.00 0.00 0.00 6.13
6699 8278 4.301027 GGGCGACTAGATGGGCGG 62.301 72.222 0.00 0.00 31.64 6.13
6700 8279 4.647615 CGGGCGACTAGATGGGCG 62.648 72.222 0.00 0.00 31.64 6.13
6701 8280 4.971125 GCGGGCGACTAGATGGGC 62.971 72.222 0.00 0.00 0.00 5.36
6702 8281 4.301027 GGCGGGCGACTAGATGGG 62.301 72.222 0.00 0.00 0.00 4.00
6703 8282 4.301027 GGGCGGGCGACTAGATGG 62.301 72.222 0.00 0.00 0.00 3.51
6704 8283 4.647615 CGGGCGGGCGACTAGATG 62.648 72.222 0.00 0.00 0.00 2.90
6720 8299 3.713288 TCTGGAAATACCGTGATTAGCG 58.287 45.455 0.00 0.00 42.61 4.26
6721 8300 4.694339 ACTCTGGAAATACCGTGATTAGC 58.306 43.478 0.00 0.00 42.61 3.09
6722 8301 5.523916 CCAACTCTGGAAATACCGTGATTAG 59.476 44.000 0.00 0.00 46.92 1.73
6723 8302 5.424757 CCAACTCTGGAAATACCGTGATTA 58.575 41.667 0.00 0.00 46.92 1.75
6724 8303 4.261801 CCAACTCTGGAAATACCGTGATT 58.738 43.478 0.00 0.00 46.92 2.57
6725 8304 3.873910 CCAACTCTGGAAATACCGTGAT 58.126 45.455 0.00 0.00 46.92 3.06
6726 8305 2.614481 GCCAACTCTGGAAATACCGTGA 60.614 50.000 0.00 0.00 46.92 4.35
6727 8306 1.737793 GCCAACTCTGGAAATACCGTG 59.262 52.381 0.00 0.00 46.92 4.94
6728 8307 1.674817 CGCCAACTCTGGAAATACCGT 60.675 52.381 0.00 0.00 46.92 4.83
6729 8308 1.006832 CGCCAACTCTGGAAATACCG 58.993 55.000 0.00 0.00 46.92 4.02
6730 8309 2.396590 TCGCCAACTCTGGAAATACC 57.603 50.000 0.00 0.00 46.92 2.73
6731 8310 2.540101 CGATCGCCAACTCTGGAAATAC 59.460 50.000 0.26 0.00 46.92 1.89
6732 8311 2.821546 CGATCGCCAACTCTGGAAATA 58.178 47.619 0.26 0.00 46.92 1.40
6733 8312 1.656652 CGATCGCCAACTCTGGAAAT 58.343 50.000 0.26 0.00 46.92 2.17
6734 8313 1.019278 GCGATCGCCAACTCTGGAAA 61.019 55.000 29.48 0.00 46.92 3.13
6735 8314 1.447838 GCGATCGCCAACTCTGGAA 60.448 57.895 29.48 0.00 46.92 3.53
6736 8315 2.184322 GCGATCGCCAACTCTGGA 59.816 61.111 29.48 0.00 46.92 3.86
6861 8440 4.796231 ACGGTGAGATGCGGCGAC 62.796 66.667 12.98 2.02 0.00 5.19
6862 8441 4.492160 GACGGTGAGATGCGGCGA 62.492 66.667 12.98 0.00 0.00 5.54
6865 8444 3.309436 TTGGGACGGTGAGATGCGG 62.309 63.158 0.00 0.00 0.00 5.69
6866 8445 2.100631 GTTGGGACGGTGAGATGCG 61.101 63.158 0.00 0.00 0.00 4.73
6867 8446 0.321653 AAGTTGGGACGGTGAGATGC 60.322 55.000 0.00 0.00 0.00 3.91
6868 8447 1.001974 TGAAGTTGGGACGGTGAGATG 59.998 52.381 0.00 0.00 0.00 2.90
6869 8448 1.002087 GTGAAGTTGGGACGGTGAGAT 59.998 52.381 0.00 0.00 0.00 2.75
6870 8449 0.391597 GTGAAGTTGGGACGGTGAGA 59.608 55.000 0.00 0.00 0.00 3.27
6871 8450 0.602905 GGTGAAGTTGGGACGGTGAG 60.603 60.000 0.00 0.00 0.00 3.51
6872 8451 1.448497 GGTGAAGTTGGGACGGTGA 59.552 57.895 0.00 0.00 0.00 4.02
6873 8452 1.599797 GGGTGAAGTTGGGACGGTG 60.600 63.158 0.00 0.00 0.00 4.94
6874 8453 2.833957 GGGTGAAGTTGGGACGGT 59.166 61.111 0.00 0.00 0.00 4.83
6875 8454 2.358247 CGGGTGAAGTTGGGACGG 60.358 66.667 0.00 0.00 0.00 4.79
6876 8455 1.666872 GACGGGTGAAGTTGGGACG 60.667 63.158 0.00 0.00 0.00 4.79
6877 8456 1.666872 CGACGGGTGAAGTTGGGAC 60.667 63.158 0.00 0.00 0.00 4.46
6878 8457 2.738480 CGACGGGTGAAGTTGGGA 59.262 61.111 0.00 0.00 0.00 4.37
6879 8458 3.047877 GCGACGGGTGAAGTTGGG 61.048 66.667 0.00 0.00 0.00 4.12
6880 8459 3.047877 GGCGACGGGTGAAGTTGG 61.048 66.667 0.00 0.00 0.00 3.77
6892 8471 4.796231 ACGGTGAGATGCGGCGAC 62.796 66.667 12.98 2.02 0.00 5.19
6893 8472 4.492160 GACGGTGAGATGCGGCGA 62.492 66.667 12.98 0.00 0.00 5.54
6896 8475 3.309436 TTGGGACGGTGAGATGCGG 62.309 63.158 0.00 0.00 0.00 5.69
6897 8476 2.100631 GTTGGGACGGTGAGATGCG 61.101 63.158 0.00 0.00 0.00 4.73
6898 8477 2.100631 CGTTGGGACGGTGAGATGC 61.101 63.158 0.00 0.00 45.32 3.91
6899 8478 4.185413 CGTTGGGACGGTGAGATG 57.815 61.111 0.00 0.00 45.32 2.90
6923 8502 4.796231 ACGGTGAGATGCGGCGAC 62.796 66.667 12.98 2.02 0.00 5.19
6924 8503 4.492160 GACGGTGAGATGCGGCGA 62.492 66.667 12.98 0.00 0.00 5.54
6926 8505 4.796231 ACGACGGTGAGATGCGGC 62.796 66.667 0.00 0.00 0.00 6.53
6927 8506 2.579787 GACGACGGTGAGATGCGG 60.580 66.667 0.00 0.00 0.00 5.69
6928 8507 2.579787 GGACGACGGTGAGATGCG 60.580 66.667 0.00 0.00 0.00 4.73
6929 8508 2.579787 CGGACGACGGTGAGATGC 60.580 66.667 0.00 0.00 39.42 3.91
6930 8509 1.226323 GTCGGACGACGGTGAGATG 60.226 63.158 9.23 0.00 44.45 2.90
6931 8510 3.185155 GTCGGACGACGGTGAGAT 58.815 61.111 9.23 0.00 44.45 2.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.