Multiple sequence alignment - TraesCS5A01G086400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G086400 chr5A 100.000 5289 0 0 1 5289 115024734 115030022 0.000000e+00 9768
1 TraesCS5A01G086400 chr5D 95.692 4410 147 15 291 4675 112048850 112053241 0.000000e+00 7051
2 TraesCS5A01G086400 chr5D 88.213 526 30 10 4755 5249 112053249 112053773 2.730000e-167 599
3 TraesCS5A01G086400 chr5D 90.119 253 8 2 21 257 112048606 112048857 3.980000e-81 313
4 TraesCS5A01G086400 chr5D 89.796 98 8 2 4663 4760 367998080 367998175 2.000000e-24 124
5 TraesCS5A01G086400 chr5B 93.925 4708 211 34 21 4675 121204564 121209249 0.000000e+00 7040
6 TraesCS5A01G086400 chr5B 87.824 501 32 12 4781 5252 121209386 121209886 1.290000e-155 560
7 TraesCS5A01G086400 chr4A 95.455 88 4 0 4676 4763 95187552 95187465 1.990000e-29 141
8 TraesCS5A01G086400 chrUn 95.238 84 4 0 4676 4759 475637853 475637770 3.320000e-27 134
9 TraesCS5A01G086400 chr4B 95.238 84 4 0 4676 4759 437940383 437940466 3.320000e-27 134
10 TraesCS5A01G086400 chr6A 93.258 89 6 0 4676 4764 101438358 101438270 1.200000e-26 132
11 TraesCS5A01G086400 chr3B 93.182 88 5 1 4669 4756 3660769 3660855 1.550000e-25 128
12 TraesCS5A01G086400 chr7B 88.679 106 6 3 4662 4761 457143798 457143693 2.000000e-24 124
13 TraesCS5A01G086400 chr2D 87.963 108 7 6 4676 4780 422331635 422331531 7.190000e-24 122
14 TraesCS5A01G086400 chr1D 89.109 101 8 3 4656 4756 361036105 361036008 7.190000e-24 122


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G086400 chr5A 115024734 115030022 5288 False 9768.000000 9768 100.000000 1 5289 1 chr5A.!!$F1 5288
1 TraesCS5A01G086400 chr5D 112048606 112053773 5167 False 2654.333333 7051 91.341333 21 5249 3 chr5D.!!$F2 5228
2 TraesCS5A01G086400 chr5B 121204564 121209886 5322 False 3800.000000 7040 90.874500 21 5252 2 chr5B.!!$F1 5231

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
766 836 0.313043 GACGGTTGTCGGTGAGAAGA 59.687 55.000 0.0 0.0 44.45 2.87 F
1698 1783 0.033504 TTCCACTCGGTGCTTCAGAC 59.966 55.000 0.0 0.0 31.34 3.51 F
3263 3353 1.820519 TCGTTACCCGTGTATTGCTCT 59.179 47.619 0.0 0.0 37.94 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1844 1930 0.174845 TATCCGAACCAGTTCCTGCG 59.825 55.000 4.99 0.0 36.27 5.18 R
3316 3406 1.208358 CATGTGTGCCGTGCTTGAG 59.792 57.895 0.00 0.0 0.00 3.02 R
5259 5490 0.107017 ATTTCCATGGTCCCTCGCAG 60.107 55.000 12.58 0.0 0.00 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
248 313 5.181748 ACCAAACTATGCTCAGAGAATGAC 58.818 41.667 0.00 0.00 33.22 3.06
249 314 5.181009 CCAAACTATGCTCAGAGAATGACA 58.819 41.667 0.00 0.00 33.22 3.58
250 315 5.064452 CCAAACTATGCTCAGAGAATGACAC 59.936 44.000 0.00 0.00 33.22 3.67
251 316 4.399004 ACTATGCTCAGAGAATGACACC 57.601 45.455 0.00 0.00 33.22 4.16
252 317 3.771479 ACTATGCTCAGAGAATGACACCA 59.229 43.478 0.00 0.00 33.22 4.17
253 318 3.928005 ATGCTCAGAGAATGACACCAT 57.072 42.857 0.00 0.00 33.22 3.55
316 381 4.729552 ATTGCCTCCAATAATCTGCCTA 57.270 40.909 0.00 0.00 39.81 3.93
317 382 3.777106 TGCCTCCAATAATCTGCCTAG 57.223 47.619 0.00 0.00 0.00 3.02
437 507 4.458989 AGCTAACATCAAAATTCTCCGCAA 59.541 37.500 0.00 0.00 0.00 4.85
468 538 3.307242 CCAACGCTCTACAGAATTAGTGC 59.693 47.826 0.00 0.00 35.93 4.40
753 823 2.579201 CCTCCATGAGCGACGGTT 59.421 61.111 0.00 0.00 0.00 4.44
755 825 1.079819 CTCCATGAGCGACGGTTGT 60.080 57.895 0.00 0.00 0.00 3.32
756 826 1.078759 CTCCATGAGCGACGGTTGTC 61.079 60.000 0.00 0.00 41.91 3.18
765 835 2.810486 GACGGTTGTCGGTGAGAAG 58.190 57.895 0.00 0.00 44.45 2.85
766 836 0.313043 GACGGTTGTCGGTGAGAAGA 59.687 55.000 0.00 0.00 44.45 2.87
767 837 0.314302 ACGGTTGTCGGTGAGAAGAG 59.686 55.000 0.00 0.00 44.45 2.85
768 838 0.388649 CGGTTGTCGGTGAGAAGAGG 60.389 60.000 0.00 0.00 34.75 3.69
811 881 2.491022 TTTTGGTTTGGGGACGCGG 61.491 57.895 12.47 0.00 0.00 6.46
860 930 3.615509 TTAACGGGCCGGGCTCTTG 62.616 63.158 31.78 17.08 0.00 3.02
912 989 0.518636 CGCTCAATCAATATGGGCCG 59.481 55.000 0.00 0.00 41.33 6.13
1010 1095 2.202690 CGTAGCCATGGACGCGAA 60.203 61.111 18.40 0.00 31.49 4.70
1222 1307 1.965930 GTCAATGCCACGGTGAGCA 60.966 57.895 20.96 20.96 44.45 4.26
1304 1389 3.048337 TCGTGGTGGGTACTTGAATTC 57.952 47.619 0.00 0.00 0.00 2.17
1310 1395 0.725117 GGGTACTTGAATTCGTGGCG 59.275 55.000 0.04 0.00 0.00 5.69
1319 1404 0.659123 AATTCGTGGCGACGTTTTGC 60.659 50.000 20.82 0.00 46.20 3.68
1468 1553 2.355837 GAGTGCGGCTTCACGTCA 60.356 61.111 0.00 0.00 41.61 4.35
1474 1559 1.797933 CGGCTTCACGTCACTCTCG 60.798 63.158 0.00 0.00 0.00 4.04
1521 1606 4.057406 TCCTCACAAGGCAAATGTTTTG 57.943 40.909 0.00 0.00 43.02 2.44
1560 1645 0.464036 AGCACCGTGAAGTCTTGTCA 59.536 50.000 1.65 0.00 0.00 3.58
1627 1712 0.109781 CGCTTTGTTCCAACCCATCG 60.110 55.000 0.00 0.00 0.00 3.84
1628 1713 0.388520 GCTTTGTTCCAACCCATCGC 60.389 55.000 0.00 0.00 0.00 4.58
1636 1721 1.497278 CAACCCATCGCTGACAACG 59.503 57.895 0.00 0.00 0.00 4.10
1698 1783 0.033504 TTCCACTCGGTGCTTCAGAC 59.966 55.000 0.00 0.00 31.34 3.51
1754 1840 3.361281 ACATCTGGCTGTCAATGTGAT 57.639 42.857 8.54 0.00 31.14 3.06
1791 1877 1.945387 GCGAGATCATTCTCTTGCCA 58.055 50.000 0.00 0.00 45.30 4.92
1793 1879 2.877168 GCGAGATCATTCTCTTGCCATT 59.123 45.455 0.00 0.00 45.30 3.16
1844 1930 3.753272 TGCTAAGTTGGATTGCTCTTGTC 59.247 43.478 0.00 0.00 0.00 3.18
2239 2326 5.109210 GTTTTTCAAGTAAGCTGCACCTTT 58.891 37.500 1.02 0.00 0.00 3.11
2268 2355 9.070149 GTTGCTAATTTTGAGATTTCAGACATC 57.930 33.333 0.00 0.00 34.15 3.06
2269 2356 7.765307 TGCTAATTTTGAGATTTCAGACATCC 58.235 34.615 0.00 0.00 34.15 3.51
2278 2365 8.404107 TGAGATTTCAGACATCCGTACATATA 57.596 34.615 0.00 0.00 0.00 0.86
2353 2440 4.567558 CGTTAGTTATACGGTGGCATTCAA 59.432 41.667 0.00 0.00 35.47 2.69
2374 2461 7.765695 TCAAAGATATTTGGAGCAATATCCC 57.234 36.000 12.62 0.00 38.72 3.85
2448 2535 1.947456 GAACTTTGTGCTCGAACCCTT 59.053 47.619 0.00 0.00 0.00 3.95
2548 2635 8.918202 AGATAACATACTTGGAACTTGTTTGA 57.082 30.769 0.00 0.00 33.03 2.69
2708 2795 8.868522 ACCTTAATTTCATTCTTGATGACTCA 57.131 30.769 0.00 0.00 44.28 3.41
2709 2796 9.471702 ACCTTAATTTCATTCTTGATGACTCAT 57.528 29.630 0.00 0.00 44.28 2.90
2710 2797 9.731819 CCTTAATTTCATTCTTGATGACTCATG 57.268 33.333 0.00 0.00 44.28 3.07
2761 2849 8.940397 AAACATTTTCTTCTCCAGGATTCTAA 57.060 30.769 0.00 0.00 0.00 2.10
2833 2921 9.371136 CTGTGAAATATCTGTAAAGCAAGACTA 57.629 33.333 0.00 0.00 0.00 2.59
2844 2932 1.974236 AGCAAGACTACCAAGCAGAGT 59.026 47.619 0.00 0.00 0.00 3.24
2915 3003 6.551227 ACAAAATTTCAACCTCTAAAGCTCCT 59.449 34.615 0.00 0.00 0.00 3.69
2944 3032 9.262358 GAGTAATGGTAAGGTCTGTATCAATTC 57.738 37.037 0.00 0.00 0.00 2.17
2945 3033 8.768397 AGTAATGGTAAGGTCTGTATCAATTCA 58.232 33.333 0.00 0.00 0.00 2.57
2959 3047 8.969121 TGTATCAATTCACATTTGTGTCATTC 57.031 30.769 10.30 1.27 45.76 2.67
2960 3048 7.750014 TGTATCAATTCACATTTGTGTCATTCG 59.250 33.333 10.30 6.23 45.76 3.34
3018 3106 4.322349 CCAGCCTAGAAGTCCATATGCTAC 60.322 50.000 0.00 0.00 0.00 3.58
3032 3120 5.105716 CCATATGCTACGTAGGCAGAACTAT 60.106 44.000 23.47 12.65 43.15 2.12
3033 3121 3.710326 TGCTACGTAGGCAGAACTATG 57.290 47.619 23.47 0.00 36.31 2.23
3072 3160 6.820656 CCAAGAAAGAGTAATGCACAGTAGAT 59.179 38.462 0.00 0.00 0.00 1.98
3074 3162 8.386606 CAAGAAAGAGTAATGCACAGTAGATTC 58.613 37.037 0.00 0.00 0.00 2.52
3090 3178 8.251721 ACAGTAGATTCGCTAATTTTGTAGAGT 58.748 33.333 0.00 0.00 0.00 3.24
3113 3203 8.591114 AGTAACTATGTAGGCAGAACTAAAGA 57.409 34.615 0.00 0.00 0.00 2.52
3119 3209 4.347000 TGTAGGCAGAACTAAAGAAGTGGT 59.653 41.667 0.00 0.00 38.88 4.16
3140 3230 3.809832 GTGCTCAGCAAGAAAGAGTAACA 59.190 43.478 0.00 0.00 41.47 2.41
3142 3232 3.809832 GCTCAGCAAGAAAGAGTAACACA 59.190 43.478 0.00 0.00 0.00 3.72
3144 3234 4.765273 TCAGCAAGAAAGAGTAACACACA 58.235 39.130 0.00 0.00 0.00 3.72
3148 3238 5.986135 AGCAAGAAAGAGTAACACACAGTAG 59.014 40.000 0.00 0.00 0.00 2.57
3204 3294 4.666412 TGGGGTCAAAATGAACTCCATA 57.334 40.909 0.00 0.00 32.27 2.74
3205 3295 4.599041 TGGGGTCAAAATGAACTCCATAG 58.401 43.478 0.00 0.00 32.27 2.23
3206 3296 4.290985 TGGGGTCAAAATGAACTCCATAGA 59.709 41.667 0.00 0.00 32.27 1.98
3263 3353 1.820519 TCGTTACCCGTGTATTGCTCT 59.179 47.619 0.00 0.00 37.94 4.09
3306 3396 2.224769 TGGTCAAATGGAAGGTCTGTCC 60.225 50.000 0.00 0.00 35.55 4.02
3414 3504 5.293569 CGAACTTCCACTTGTAGTTTGAAGT 59.706 40.000 12.35 12.35 43.72 3.01
3432 3522 9.045223 GTTTGAAGTGCCTATTTCTTTTTCAAT 57.955 29.630 0.00 0.00 34.47 2.57
3436 3526 9.428097 GAAGTGCCTATTTCTTTTTCAATCAAT 57.572 29.630 0.00 0.00 0.00 2.57
3488 3578 8.188799 TGTCTGAGATAGTATTACCTTTTGTCG 58.811 37.037 0.00 0.00 0.00 4.35
3512 3602 1.278238 CCGTGTATTGCTTCCGAGTC 58.722 55.000 0.00 0.00 0.00 3.36
3580 3670 1.405256 CCAGGTAGTGAGCAGCTGAAG 60.405 57.143 20.43 0.00 42.74 3.02
3607 3697 1.427020 GATTCTCTGCTTGCACGGC 59.573 57.895 4.11 4.11 0.00 5.68
3667 3757 2.560504 TCACTTGCGAAGAAGCTGAAA 58.439 42.857 0.00 0.00 38.13 2.69
3704 3794 4.106029 GTCTTTATAGACGCTCCACACA 57.894 45.455 0.00 0.00 41.28 3.72
3723 3813 5.794945 CACACAAGCTTTCATTTGTATACCG 59.205 40.000 0.00 0.00 35.86 4.02
3871 3961 1.609841 CCGTTTGACCCCCTTCAGTAC 60.610 57.143 0.00 0.00 0.00 2.73
4120 4210 1.448540 CTCGCTCCATTGCTTCGGT 60.449 57.895 0.00 0.00 0.00 4.69
4231 4321 2.829720 GCATGACATGGGGCATATCATT 59.170 45.455 17.03 0.00 36.07 2.57
4337 4428 3.708451 TGTTGTATCTCTGGACCTGCTA 58.292 45.455 0.00 0.00 0.00 3.49
4441 4532 0.458669 CCAGATGCTTTGTGGATGGC 59.541 55.000 0.00 0.00 32.60 4.40
4465 4556 4.034279 GCAAAATAGTTATTGTCCCGCGTA 59.966 41.667 4.92 0.00 0.00 4.42
4466 4557 5.495502 CAAAATAGTTATTGTCCCGCGTAC 58.504 41.667 4.92 3.28 0.00 3.67
4467 4558 4.389890 AATAGTTATTGTCCCGCGTACA 57.610 40.909 4.92 6.38 0.00 2.90
4468 4559 2.288961 AGTTATTGTCCCGCGTACAG 57.711 50.000 4.92 0.00 0.00 2.74
4469 4560 0.648958 GTTATTGTCCCGCGTACAGC 59.351 55.000 4.92 0.00 43.95 4.40
4500 4591 3.498774 ATCATGTCTTAGGATGTGCCC 57.501 47.619 0.00 0.00 37.37 5.36
4501 4592 2.195727 TCATGTCTTAGGATGTGCCCA 58.804 47.619 0.00 0.00 37.37 5.36
4524 4615 7.649306 CCCATTATTCTGCTTTAGTATTTGTGC 59.351 37.037 0.00 0.00 0.00 4.57
4610 4702 4.713321 CCTTCAGGGAAAAATGACATGGAT 59.287 41.667 0.00 0.00 37.23 3.41
4675 4767 5.689383 TTGACCAACAATTTCTCTGCTAC 57.311 39.130 0.00 0.00 33.18 3.58
4676 4768 4.072131 TGACCAACAATTTCTCTGCTACC 58.928 43.478 0.00 0.00 0.00 3.18
4677 4769 3.421844 ACCAACAATTTCTCTGCTACCC 58.578 45.455 0.00 0.00 0.00 3.69
4679 4771 3.691609 CCAACAATTTCTCTGCTACCCTC 59.308 47.826 0.00 0.00 0.00 4.30
4680 4772 4.566488 CCAACAATTTCTCTGCTACCCTCT 60.566 45.833 0.00 0.00 0.00 3.69
4681 4773 4.213564 ACAATTTCTCTGCTACCCTCTG 57.786 45.455 0.00 0.00 0.00 3.35
4682 4774 3.584848 ACAATTTCTCTGCTACCCTCTGT 59.415 43.478 0.00 0.00 0.00 3.41
4683 4775 4.187694 CAATTTCTCTGCTACCCTCTGTC 58.812 47.826 0.00 0.00 0.00 3.51
4684 4776 2.909504 TTCTCTGCTACCCTCTGTCT 57.090 50.000 0.00 0.00 0.00 3.41
4685 4777 2.428544 TCTCTGCTACCCTCTGTCTC 57.571 55.000 0.00 0.00 0.00 3.36
4686 4778 1.636003 TCTCTGCTACCCTCTGTCTCA 59.364 52.381 0.00 0.00 0.00 3.27
4687 4779 2.243478 TCTCTGCTACCCTCTGTCTCAT 59.757 50.000 0.00 0.00 0.00 2.90
4688 4780 3.459969 TCTCTGCTACCCTCTGTCTCATA 59.540 47.826 0.00 0.00 0.00 2.15
4689 4781 4.079730 TCTCTGCTACCCTCTGTCTCATAA 60.080 45.833 0.00 0.00 0.00 1.90
4690 4782 4.809193 TCTGCTACCCTCTGTCTCATAAT 58.191 43.478 0.00 0.00 0.00 1.28
4691 4783 4.586421 TCTGCTACCCTCTGTCTCATAATG 59.414 45.833 0.00 0.00 0.00 1.90
4692 4784 4.290093 TGCTACCCTCTGTCTCATAATGT 58.710 43.478 0.00 0.00 0.00 2.71
4693 4785 5.454966 TGCTACCCTCTGTCTCATAATGTA 58.545 41.667 0.00 0.00 0.00 2.29
4694 4786 5.897250 TGCTACCCTCTGTCTCATAATGTAA 59.103 40.000 0.00 0.00 0.00 2.41
4695 4787 6.040955 TGCTACCCTCTGTCTCATAATGTAAG 59.959 42.308 0.00 0.00 0.00 2.34
4696 4788 6.265649 GCTACCCTCTGTCTCATAATGTAAGA 59.734 42.308 0.00 0.00 0.00 2.10
4697 4789 6.472686 ACCCTCTGTCTCATAATGTAAGAC 57.527 41.667 0.00 0.00 39.87 3.01
4698 4790 5.067936 ACCCTCTGTCTCATAATGTAAGACG 59.932 44.000 0.00 0.00 41.84 4.18
4699 4791 5.067936 CCCTCTGTCTCATAATGTAAGACGT 59.932 44.000 0.00 0.00 41.84 4.34
4700 4792 6.405953 CCCTCTGTCTCATAATGTAAGACGTT 60.406 42.308 0.00 0.00 41.84 3.99
4701 4793 7.036220 CCTCTGTCTCATAATGTAAGACGTTT 58.964 38.462 0.00 0.00 41.84 3.60
4702 4794 7.545965 CCTCTGTCTCATAATGTAAGACGTTTT 59.454 37.037 0.00 0.00 41.84 2.43
4703 4795 8.827177 TCTGTCTCATAATGTAAGACGTTTTT 57.173 30.769 0.00 0.00 41.84 1.94
4751 4843 5.289595 CGTCATATATTATGGGACGGATGG 58.710 45.833 17.30 0.00 45.36 3.51
4752 4844 5.068591 CGTCATATATTATGGGACGGATGGA 59.931 44.000 17.30 0.00 45.36 3.41
4924 5144 5.184711 AGTTCAGAATGCTCTTTCTCCATC 58.815 41.667 0.00 0.00 33.69 3.51
4951 5173 3.876914 TCTCACTTTGTGCAGGTTTGTAG 59.123 43.478 0.00 0.00 32.98 2.74
4953 5175 3.376859 TCACTTTGTGCAGGTTTGTAGTG 59.623 43.478 0.00 0.00 32.98 2.74
5043 5265 9.657419 AAAACTGAAACATTGAGATTTTGAAGT 57.343 25.926 0.00 0.00 0.00 3.01
5049 5271 7.504924 AACATTGAGATTTTGAAGTTCCGTA 57.495 32.000 0.00 0.00 0.00 4.02
5073 5295 5.164620 TGACTTTGCTGATGAACTATGGA 57.835 39.130 0.00 0.00 0.00 3.41
5082 5304 6.479990 TGCTGATGAACTATGGACGATTAAAG 59.520 38.462 0.00 0.00 0.00 1.85
5105 5327 6.158175 GTTGCACAAACTAGACTAGTGATG 57.842 41.667 15.88 18.20 39.39 3.07
5118 5340 2.307496 AGTGATGGCCAAAATCCACA 57.693 45.000 10.96 0.00 36.26 4.17
5148 5370 4.597507 TGGAGGTAGAATGGTGAGACTTTT 59.402 41.667 0.00 0.00 0.00 2.27
5149 5371 5.783360 TGGAGGTAGAATGGTGAGACTTTTA 59.217 40.000 0.00 0.00 0.00 1.52
5151 5373 7.622081 TGGAGGTAGAATGGTGAGACTTTTATA 59.378 37.037 0.00 0.00 0.00 0.98
5176 5398 1.436600 CATCACTGCCTCAGACACAC 58.563 55.000 0.29 0.00 35.18 3.82
5188 5410 4.574421 CCTCAGACACACAACACATAACAA 59.426 41.667 0.00 0.00 0.00 2.83
5192 5423 7.542890 TCAGACACACAACACATAACAAAAAT 58.457 30.769 0.00 0.00 0.00 1.82
5252 5483 5.127845 TCTCTCACTTCCCTGTGCTAAATAG 59.872 44.000 0.00 0.00 37.81 1.73
5253 5484 4.162320 TCTCACTTCCCTGTGCTAAATAGG 59.838 45.833 0.00 0.00 37.81 2.57
5256 5487 3.006672 CCCTGTGCTAAATAGGGCG 57.993 57.895 0.00 0.00 44.27 6.13
5257 5488 0.180406 CCCTGTGCTAAATAGGGCGT 59.820 55.000 0.00 0.00 44.27 5.68
5258 5489 1.583054 CCTGTGCTAAATAGGGCGTC 58.417 55.000 0.00 0.00 0.00 5.19
5259 5490 1.583054 CTGTGCTAAATAGGGCGTCC 58.417 55.000 0.00 0.00 0.00 4.79
5260 5491 1.139058 CTGTGCTAAATAGGGCGTCCT 59.861 52.381 15.76 15.76 46.96 3.85
5261 5492 1.134521 TGTGCTAAATAGGGCGTCCTG 60.135 52.381 21.58 1.50 44.61 3.86
5262 5493 0.179056 TGCTAAATAGGGCGTCCTGC 60.179 55.000 21.58 14.14 44.61 4.85
5274 5505 3.083349 TCCTGCGAGGGACCATGG 61.083 66.667 11.19 11.19 35.59 3.66
5275 5506 3.083349 CCTGCGAGGGACCATGGA 61.083 66.667 21.47 0.00 0.00 3.41
5276 5507 2.669133 CCTGCGAGGGACCATGGAA 61.669 63.158 21.47 0.00 0.00 3.53
5277 5508 1.299648 CTGCGAGGGACCATGGAAA 59.700 57.895 21.47 0.00 0.00 3.13
5278 5509 0.107017 CTGCGAGGGACCATGGAAAT 60.107 55.000 21.47 0.00 0.00 2.17
5279 5510 0.331278 TGCGAGGGACCATGGAAATT 59.669 50.000 21.47 0.00 0.00 1.82
5280 5511 1.272425 TGCGAGGGACCATGGAAATTT 60.272 47.619 21.47 0.00 0.00 1.82
5281 5512 1.134946 GCGAGGGACCATGGAAATTTG 59.865 52.381 21.47 6.36 0.00 2.32
5282 5513 1.750778 CGAGGGACCATGGAAATTTGG 59.249 52.381 21.47 0.00 0.00 3.28
5283 5514 2.620367 CGAGGGACCATGGAAATTTGGA 60.620 50.000 21.47 0.00 0.00 3.53
5284 5515 2.760650 GAGGGACCATGGAAATTTGGAC 59.239 50.000 21.47 0.00 0.00 4.02
5285 5516 1.831106 GGGACCATGGAAATTTGGACC 59.169 52.381 21.47 0.81 35.93 4.46
5286 5517 1.831106 GGACCATGGAAATTTGGACCC 59.169 52.381 21.47 0.00 31.68 4.46
5287 5518 2.559705 GGACCATGGAAATTTGGACCCT 60.560 50.000 21.47 0.00 31.68 4.34
5288 5519 2.497273 GACCATGGAAATTTGGACCCTG 59.503 50.000 21.47 0.00 0.00 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.327628 GAAGAAATATGGTAGAAACTAGGGTTC 57.672 37.037 0.00 0.00 34.14 3.62
1 2 8.272889 GGAAGAAATATGGTAGAAACTAGGGTT 58.727 37.037 0.00 0.00 37.24 4.11
2 3 7.404980 TGGAAGAAATATGGTAGAAACTAGGGT 59.595 37.037 0.00 0.00 0.00 4.34
3 4 7.802117 TGGAAGAAATATGGTAGAAACTAGGG 58.198 38.462 0.00 0.00 0.00 3.53
4 5 9.681062 TTTGGAAGAAATATGGTAGAAACTAGG 57.319 33.333 0.00 0.00 0.00 3.02
6 7 9.158233 CGTTTGGAAGAAATATGGTAGAAACTA 57.842 33.333 0.00 0.00 0.00 2.24
7 8 7.881232 TCGTTTGGAAGAAATATGGTAGAAACT 59.119 33.333 0.00 0.00 0.00 2.66
8 9 8.036273 TCGTTTGGAAGAAATATGGTAGAAAC 57.964 34.615 0.00 0.00 0.00 2.78
9 10 8.624367 TTCGTTTGGAAGAAATATGGTAGAAA 57.376 30.769 0.00 0.00 0.00 2.52
10 11 8.624367 TTTCGTTTGGAAGAAATATGGTAGAA 57.376 30.769 0.00 0.00 35.70 2.10
11 12 8.098286 TCTTTCGTTTGGAAGAAATATGGTAGA 58.902 33.333 0.00 0.00 36.02 2.59
12 13 8.263940 TCTTTCGTTTGGAAGAAATATGGTAG 57.736 34.615 0.00 0.00 36.02 3.18
13 14 8.673711 CATCTTTCGTTTGGAAGAAATATGGTA 58.326 33.333 7.81 0.00 37.33 3.25
14 15 7.393234 TCATCTTTCGTTTGGAAGAAATATGGT 59.607 33.333 12.82 0.00 39.40 3.55
15 16 7.761409 TCATCTTTCGTTTGGAAGAAATATGG 58.239 34.615 12.82 0.00 39.40 2.74
16 17 7.912250 CCTCATCTTTCGTTTGGAAGAAATATG 59.088 37.037 8.86 8.86 39.85 1.78
17 18 7.067494 CCCTCATCTTTCGTTTGGAAGAAATAT 59.933 37.037 0.00 0.00 36.02 1.28
18 19 6.374333 CCCTCATCTTTCGTTTGGAAGAAATA 59.626 38.462 0.00 0.00 36.02 1.40
19 20 5.183904 CCCTCATCTTTCGTTTGGAAGAAAT 59.816 40.000 0.00 0.00 36.02 2.17
67 68 8.116651 TCTATTTTGCTAAAATGCTGGTAACA 57.883 30.769 13.65 0.00 42.52 2.41
203 268 7.212976 TGGTATCATTCTCTGCTCATAGTTTC 58.787 38.462 0.00 0.00 0.00 2.78
248 313 7.154656 TCCGTATCTGAATTCTGAATATGGTG 58.845 38.462 23.52 12.25 0.00 4.17
249 314 7.303182 TCCGTATCTGAATTCTGAATATGGT 57.697 36.000 23.52 12.20 0.00 3.55
250 315 8.607441 TTTCCGTATCTGAATTCTGAATATGG 57.393 34.615 17.62 20.04 0.00 2.74
251 316 8.226448 GCTTTCCGTATCTGAATTCTGAATATG 58.774 37.037 17.62 14.22 0.00 1.78
252 317 8.153550 AGCTTTCCGTATCTGAATTCTGAATAT 58.846 33.333 17.62 5.78 0.00 1.28
253 318 7.439356 CAGCTTTCCGTATCTGAATTCTGAATA 59.561 37.037 17.62 8.96 0.00 1.75
316 381 0.765510 AGACCTTGGACCGAAAAGCT 59.234 50.000 0.00 0.00 0.00 3.74
317 382 2.467566 TAGACCTTGGACCGAAAAGC 57.532 50.000 0.00 0.00 0.00 3.51
376 441 7.335627 ACTCCCTTTGACGAATATCAAATGTA 58.664 34.615 1.68 0.00 45.21 2.29
378 443 6.683974 ACTCCCTTTGACGAATATCAAATG 57.316 37.500 1.68 0.03 45.21 2.32
432 502 1.667510 GTTGGCATTTGGGTTGCGG 60.668 57.895 0.00 0.00 41.07 5.69
437 507 0.037590 TAGAGCGTTGGCATTTGGGT 59.962 50.000 0.00 0.00 43.41 4.51
704 774 3.418744 GACGCGGCCTCTCTTCCTC 62.419 68.421 12.47 0.00 0.00 3.71
753 823 1.614583 CCTCTCCTCTTCTCACCGACA 60.615 57.143 0.00 0.00 0.00 4.35
755 825 0.992695 TCCTCTCCTCTTCTCACCGA 59.007 55.000 0.00 0.00 0.00 4.69
756 826 1.388547 CTCCTCTCCTCTTCTCACCG 58.611 60.000 0.00 0.00 0.00 4.94
764 834 2.007636 AGAACCTTCCTCCTCTCCTCT 58.992 52.381 0.00 0.00 0.00 3.69
765 835 2.384828 GAGAACCTTCCTCCTCTCCTC 58.615 57.143 0.00 0.00 0.00 3.71
766 836 1.341581 CGAGAACCTTCCTCCTCTCCT 60.342 57.143 0.00 0.00 32.35 3.69
767 837 1.107945 CGAGAACCTTCCTCCTCTCC 58.892 60.000 0.00 0.00 32.35 3.71
768 838 0.458260 GCGAGAACCTTCCTCCTCTC 59.542 60.000 0.00 0.00 0.00 3.20
811 881 1.203313 CCCACGTTTCGTTTCGCTC 59.797 57.895 0.00 0.00 38.32 5.03
819 889 1.006832 CCTTATCTGCCCACGTTTCG 58.993 55.000 0.00 0.00 0.00 3.46
912 989 2.361230 CCGGCTTTCCCAGAACCC 60.361 66.667 0.00 0.00 0.00 4.11
1077 1162 3.382832 AGGAGCACGCCGTAGCTT 61.383 61.111 13.75 0.00 42.04 3.74
1222 1307 2.696187 GGAGAACTAGAAAGAGGCGGAT 59.304 50.000 0.00 0.00 0.00 4.18
1283 1368 3.606687 GAATTCAAGTACCCACCACGAT 58.393 45.455 0.00 0.00 0.00 3.73
1310 1395 1.154469 GCTACCAGCGCAAAACGTC 60.154 57.895 11.47 0.00 46.11 4.34
1468 1553 2.672307 ACGAGCCGAACCGAGAGT 60.672 61.111 1.50 0.00 0.00 3.24
1474 1559 1.289800 GAACCTTGACGAGCCGAACC 61.290 60.000 1.50 0.00 0.00 3.62
1560 1645 8.340618 AGAACAGCATTAGACACAATGTAATT 57.659 30.769 0.00 0.00 38.04 1.40
1627 1712 0.249489 AGATATCGGGCGTTGTCAGC 60.249 55.000 0.00 0.00 0.00 4.26
1628 1713 1.067060 TGAGATATCGGGCGTTGTCAG 59.933 52.381 0.00 0.00 0.00 3.51
1636 1721 1.078759 CGGCGAATGAGATATCGGGC 61.079 60.000 0.00 0.00 39.38 6.13
1698 1783 1.073763 TGAGAATCAACCCACCCACAG 59.926 52.381 0.00 0.00 45.97 3.66
1791 1877 9.899226 GCTCTTGTTTAAACATCTGTTCTTAAT 57.101 29.630 21.17 0.00 38.95 1.40
1793 1879 8.677148 AGCTCTTGTTTAAACATCTGTTCTTA 57.323 30.769 21.17 2.91 38.95 2.10
1844 1930 0.174845 TATCCGAACCAGTTCCTGCG 59.825 55.000 4.99 0.00 36.27 5.18
2239 2326 6.429692 TCTGAAATCTCAAAATTAGCAACCGA 59.570 34.615 0.00 0.00 0.00 4.69
2268 2355 6.792326 ACGATATCATGGTGTATATGTACGG 58.208 40.000 3.12 0.00 33.36 4.02
2269 2356 8.610035 AGTACGATATCATGGTGTATATGTACG 58.390 37.037 3.12 0.00 33.55 3.67
2278 2365 4.765273 TGCAAAGTACGATATCATGGTGT 58.235 39.130 3.12 0.00 0.00 4.16
2353 2440 6.126863 TCGGGATATTGCTCCAAATATCTT 57.873 37.500 13.70 0.00 44.07 2.40
2374 2461 3.213506 TCCATCAAAATAGCCACCATCG 58.786 45.455 0.00 0.00 0.00 3.84
2410 2497 3.119101 AGTTCAGCACTAACCTATGGTCG 60.119 47.826 0.00 0.00 33.12 4.79
2697 2784 5.642491 ACACATTCTGTCATGAGTCATCAAG 59.358 40.000 1.56 1.46 39.39 3.02
2833 2921 1.930251 TAGCTCTGACTCTGCTTGGT 58.070 50.000 0.00 0.00 38.15 3.67
2915 3003 3.798515 ACAGACCTTACCATTACTCCCA 58.201 45.455 0.00 0.00 0.00 4.37
2944 3032 4.424061 ACATCCGAATGACACAAATGTG 57.576 40.909 11.83 11.83 42.57 3.21
2945 3033 5.221880 CAAACATCCGAATGACACAAATGT 58.778 37.500 0.00 0.00 43.71 2.71
3018 3106 3.119101 ACACTTCCATAGTTCTGCCTACG 60.119 47.826 0.00 0.00 33.85 3.51
3072 3160 9.865321 ACATAGTTACTCTACAAAATTAGCGAA 57.135 29.630 0.00 0.00 0.00 4.70
3090 3178 9.032624 ACTTCTTTAGTTCTGCCTACATAGTTA 57.967 33.333 0.00 0.00 31.29 2.24
3113 3203 1.952296 CTTTCTTGCTGAGCACCACTT 59.048 47.619 6.64 0.00 38.71 3.16
3119 3209 3.809832 GTGTTACTCTTTCTTGCTGAGCA 59.190 43.478 1.40 1.40 36.47 4.26
3140 3230 7.277981 CCTACAAAATTAGCGAATCTACTGTGT 59.722 37.037 0.00 0.00 0.00 3.72
3142 3232 6.761714 CCCTACAAAATTAGCGAATCTACTGT 59.238 38.462 0.00 0.00 0.00 3.55
3144 3234 7.120923 TCCCTACAAAATTAGCGAATCTACT 57.879 36.000 0.00 0.00 0.00 2.57
3148 3238 7.964604 ATACTCCCTACAAAATTAGCGAATC 57.035 36.000 0.00 0.00 0.00 2.52
3263 3353 5.105635 CCAATGCTTTTATCTCTTTGCTCCA 60.106 40.000 0.00 0.00 0.00 3.86
3316 3406 1.208358 CATGTGTGCCGTGCTTGAG 59.792 57.895 0.00 0.00 0.00 3.02
3414 3504 8.087750 ACGAATTGATTGAAAAAGAAATAGGCA 58.912 29.630 0.00 0.00 0.00 4.75
3432 3522 5.766150 ATTGAAGACCACAAACGAATTGA 57.234 34.783 11.60 0.00 41.85 2.57
3436 3526 5.766150 ATGAATTGAAGACCACAAACGAA 57.234 34.783 0.00 0.00 0.00 3.85
3539 3629 4.022416 TGGTACATCATTTCCACAAGTTGC 60.022 41.667 1.81 0.00 0.00 4.17
3580 3670 3.126686 GCAAGCAGAGAATCCTCAACTTC 59.873 47.826 0.00 0.00 41.87 3.01
3607 3697 4.372656 AGTTTGAAGAGTTCTGACGGAAG 58.627 43.478 0.00 0.00 34.23 3.46
3667 3757 1.738099 GACAAGCTCCGCGATGTGT 60.738 57.895 8.23 3.91 34.69 3.72
3700 3790 5.703592 TCGGTATACAAATGAAAGCTTGTGT 59.296 36.000 0.00 2.60 36.47 3.72
3704 3794 5.123344 GTGGTCGGTATACAAATGAAAGCTT 59.877 40.000 5.01 0.00 0.00 3.74
3775 3865 3.124578 AGCCATGCGGATTTTGTTTTT 57.875 38.095 0.00 0.00 0.00 1.94
3786 3876 1.154205 CGGAGAAACTAGCCATGCGG 61.154 60.000 0.00 0.00 0.00 5.69
3871 3961 0.179029 ACCCGTCTGTTTGTTCCTGG 60.179 55.000 0.00 0.00 0.00 4.45
4120 4210 1.003839 GTCATGACCTTCACCGCCA 60.004 57.895 15.31 0.00 0.00 5.69
4205 4295 0.966875 TGCCCCATGTCATGCTCAAC 60.967 55.000 7.35 0.00 0.00 3.18
4231 4321 3.357952 TAGGGTGGCCGGGTAGGA 61.358 66.667 2.18 0.00 45.00 2.94
4441 4532 3.359654 GCGGGACAATAACTATTTTGCG 58.640 45.455 0.00 0.00 0.00 4.85
4465 4556 7.928307 AAGACATGATTTTATACAGTGCTGT 57.072 32.000 9.90 9.90 46.87 4.40
4466 4557 8.554528 CCTAAGACATGATTTTATACAGTGCTG 58.445 37.037 0.00 0.00 0.00 4.41
4467 4558 8.486210 TCCTAAGACATGATTTTATACAGTGCT 58.514 33.333 0.00 0.00 0.00 4.40
4468 4559 8.662781 TCCTAAGACATGATTTTATACAGTGC 57.337 34.615 0.00 0.00 0.00 4.40
4495 4586 6.884280 ATACTAAAGCAGAATAATGGGCAC 57.116 37.500 0.00 0.00 0.00 5.01
4500 4591 9.571810 TTGCACAAATACTAAAGCAGAATAATG 57.428 29.630 0.00 0.00 33.14 1.90
4544 4636 9.090692 CTCAAACAATCAAAATCTTTCACACTT 57.909 29.630 0.00 0.00 0.00 3.16
4546 4638 7.223387 AGCTCAAACAATCAAAATCTTTCACAC 59.777 33.333 0.00 0.00 0.00 3.82
4675 4767 5.067936 ACGTCTTACATTATGAGACAGAGGG 59.932 44.000 12.46 1.64 42.74 4.30
4676 4768 6.137794 ACGTCTTACATTATGAGACAGAGG 57.862 41.667 12.46 9.06 42.74 3.69
4677 4769 8.467402 AAAACGTCTTACATTATGAGACAGAG 57.533 34.615 12.46 2.17 42.74 3.35
4723 4815 7.218614 TCCGTCCCATAATATATGACGTTTTT 58.781 34.615 16.65 0.00 45.29 1.94
4724 4816 6.761312 TCCGTCCCATAATATATGACGTTTT 58.239 36.000 16.65 0.00 45.29 2.43
4725 4817 6.349243 TCCGTCCCATAATATATGACGTTT 57.651 37.500 16.65 0.00 45.29 3.60
4726 4818 5.988310 TCCGTCCCATAATATATGACGTT 57.012 39.130 16.65 0.00 45.29 3.99
4727 4819 5.163447 CCATCCGTCCCATAATATATGACGT 60.163 44.000 16.65 0.00 45.29 4.34
4728 4820 5.068591 TCCATCCGTCCCATAATATATGACG 59.931 44.000 13.00 13.00 46.05 4.35
4729 4821 6.098409 ACTCCATCCGTCCCATAATATATGAC 59.902 42.308 0.00 0.00 0.00 3.06
4730 4822 6.202331 ACTCCATCCGTCCCATAATATATGA 58.798 40.000 0.00 0.00 0.00 2.15
4731 4823 6.485830 ACTCCATCCGTCCCATAATATATG 57.514 41.667 0.00 0.00 0.00 1.78
4732 4824 8.798975 AATACTCCATCCGTCCCATAATATAT 57.201 34.615 0.00 0.00 0.00 0.86
4733 4825 8.618240 AAATACTCCATCCGTCCCATAATATA 57.382 34.615 0.00 0.00 0.00 0.86
4734 4826 7.510675 AAATACTCCATCCGTCCCATAATAT 57.489 36.000 0.00 0.00 0.00 1.28
4735 4827 6.945636 AAATACTCCATCCGTCCCATAATA 57.054 37.500 0.00 0.00 0.00 0.98
4736 4828 5.843019 AAATACTCCATCCGTCCCATAAT 57.157 39.130 0.00 0.00 0.00 1.28
4737 4829 5.640158 AAAATACTCCATCCGTCCCATAA 57.360 39.130 0.00 0.00 0.00 1.90
4738 4830 5.603395 TGTAAAATACTCCATCCGTCCCATA 59.397 40.000 0.00 0.00 0.00 2.74
4739 4831 4.410883 TGTAAAATACTCCATCCGTCCCAT 59.589 41.667 0.00 0.00 0.00 4.00
4740 4832 3.775866 TGTAAAATACTCCATCCGTCCCA 59.224 43.478 0.00 0.00 0.00 4.37
4741 4833 4.411256 TGTAAAATACTCCATCCGTCCC 57.589 45.455 0.00 0.00 0.00 4.46
4742 4834 4.755123 CCATGTAAAATACTCCATCCGTCC 59.245 45.833 0.00 0.00 0.00 4.79
4743 4835 5.365619 ACCATGTAAAATACTCCATCCGTC 58.634 41.667 0.00 0.00 0.00 4.79
4744 4836 5.367945 ACCATGTAAAATACTCCATCCGT 57.632 39.130 0.00 0.00 0.00 4.69
4745 4837 9.496873 TTTATACCATGTAAAATACTCCATCCG 57.503 33.333 0.00 0.00 0.00 4.18
4880 5100 1.388547 TCAATCTTGCCGGCCATTAC 58.611 50.000 26.77 0.00 0.00 1.89
4883 5103 1.143684 ACTATCAATCTTGCCGGCCAT 59.856 47.619 26.77 10.67 0.00 4.40
4924 5144 0.167470 CTGCACAAAGTGAGATGGCG 59.833 55.000 0.58 0.00 35.23 5.69
4951 5173 5.237815 TCTGATGTAAGTTGGATCACACAC 58.762 41.667 0.00 0.00 0.00 3.82
4953 5175 9.935241 ATATATCTGATGTAAGTTGGATCACAC 57.065 33.333 0.00 0.00 0.00 3.82
4981 5203 9.491675 TTTATTGTCAGAATTTGTTGCAATGAT 57.508 25.926 0.59 0.00 32.11 2.45
5030 5252 6.934645 AGTCATTACGGAACTTCAAAATCTCA 59.065 34.615 0.00 0.00 0.00 3.27
5031 5253 7.365840 AGTCATTACGGAACTTCAAAATCTC 57.634 36.000 0.00 0.00 0.00 2.75
5041 5263 4.002906 TCAGCAAAGTCATTACGGAACT 57.997 40.909 0.00 0.00 0.00 3.01
5043 5265 4.574892 TCATCAGCAAAGTCATTACGGAA 58.425 39.130 0.00 0.00 0.00 4.30
5049 5271 6.094603 GTCCATAGTTCATCAGCAAAGTCATT 59.905 38.462 0.00 0.00 0.00 2.57
5073 5295 6.482308 AGTCTAGTTTGTGCAACTTTAATCGT 59.518 34.615 0.00 0.00 43.89 3.73
5082 5304 5.120830 CCATCACTAGTCTAGTTTGTGCAAC 59.879 44.000 9.95 0.00 36.76 4.17
5105 5327 1.265236 TCATGGTGTGGATTTTGGCC 58.735 50.000 0.00 0.00 0.00 5.36
5118 5340 3.137176 CACCATTCTACCTCCATCATGGT 59.863 47.826 2.79 0.00 44.25 3.55
5148 5370 4.529377 TCTGAGGCAGTGATGCATGATATA 59.471 41.667 2.46 0.00 36.33 0.86
5149 5371 3.326880 TCTGAGGCAGTGATGCATGATAT 59.673 43.478 2.46 0.00 36.33 1.63
5151 5373 1.489230 TCTGAGGCAGTGATGCATGAT 59.511 47.619 2.46 0.00 36.33 2.45
5156 5378 0.321034 TGTGTCTGAGGCAGTGATGC 60.321 55.000 0.00 0.00 32.61 3.91
5170 5392 9.894439 GTTTATTTTTGTTATGTGTTGTGTGTC 57.106 29.630 0.00 0.00 0.00 3.67
5214 5445 2.168728 GTGAGAGAAGACATGTACCCCC 59.831 54.545 0.00 0.00 0.00 5.40
5257 5488 3.083349 CCATGGTCCCTCGCAGGA 61.083 66.667 2.57 0.00 37.67 3.86
5258 5489 2.196997 TTTCCATGGTCCCTCGCAGG 62.197 60.000 12.58 0.00 34.30 4.85
5259 5490 0.107017 ATTTCCATGGTCCCTCGCAG 60.107 55.000 12.58 0.00 0.00 5.18
5260 5491 0.331278 AATTTCCATGGTCCCTCGCA 59.669 50.000 12.58 0.00 0.00 5.10
5261 5492 1.134946 CAAATTTCCATGGTCCCTCGC 59.865 52.381 12.58 0.00 0.00 5.03
5262 5493 1.750778 CCAAATTTCCATGGTCCCTCG 59.249 52.381 12.58 0.00 31.84 4.63
5263 5494 2.760650 GTCCAAATTTCCATGGTCCCTC 59.239 50.000 12.58 0.00 37.94 4.30
5264 5495 2.559705 GGTCCAAATTTCCATGGTCCCT 60.560 50.000 12.58 0.00 38.50 4.20
5265 5496 1.831106 GGTCCAAATTTCCATGGTCCC 59.169 52.381 12.58 0.00 38.50 4.46
5266 5497 1.831106 GGGTCCAAATTTCCATGGTCC 59.169 52.381 12.58 2.53 42.16 4.46
5267 5498 2.497273 CAGGGTCCAAATTTCCATGGTC 59.503 50.000 12.58 0.00 37.94 4.02
5268 5499 2.539302 CAGGGTCCAAATTTCCATGGT 58.461 47.619 12.58 0.00 37.94 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.