Multiple sequence alignment - TraesCS5A01G084700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G084700 chr5A 100.000 6438 0 0 1 6438 110383772 110377335 0.000000e+00 11889.0
1 TraesCS5A01G084700 chr5A 97.862 421 9 0 3342 3762 54461967 54462387 0.000000e+00 728.0
2 TraesCS5A01G084700 chr5A 95.465 419 19 0 3344 3762 552329969 552330387 0.000000e+00 669.0
3 TraesCS5A01G084700 chr5D 94.269 3350 137 25 1 3339 107586533 107583228 0.000000e+00 5072.0
4 TraesCS5A01G084700 chr5D 94.041 2064 75 20 3763 5789 107583235 107581183 0.000000e+00 3086.0
5 TraesCS5A01G084700 chr5D 93.071 534 27 7 5909 6438 107580969 107580442 0.000000e+00 773.0
6 TraesCS5A01G084700 chr5D 93.069 101 6 1 5813 5913 107581123 107581024 5.200000e-31 147.0
7 TraesCS5A01G084700 chr5B 95.242 2501 80 18 844 3339 116896628 116894162 0.000000e+00 3923.0
8 TraesCS5A01G084700 chr5B 93.095 2071 87 23 3763 5795 116894169 116892117 0.000000e+00 2981.0
9 TraesCS5A01G084700 chr5B 90.280 535 34 9 5909 6438 116891859 116891338 0.000000e+00 684.0
10 TraesCS5A01G084700 chr5B 79.839 124 21 3 4039 4160 648746401 648746522 3.200000e-13 87.9
11 TraesCS5A01G084700 chr3A 99.526 422 2 0 3341 3762 725496167 725495746 0.000000e+00 769.0
12 TraesCS5A01G084700 chr3A 97.170 424 12 0 3340 3763 741985960 741985537 0.000000e+00 717.0
13 TraesCS5A01G084700 chr3A 95.735 422 17 1 3342 3762 221916148 221915727 0.000000e+00 678.0
14 TraesCS5A01G084700 chr2A 97.630 422 9 1 3341 3762 709189060 709189480 0.000000e+00 723.0
15 TraesCS5A01G084700 chr2A 95.261 422 19 1 3342 3762 81020265 81020686 0.000000e+00 667.0
16 TraesCS5A01G084700 chr2A 80.667 150 29 0 4029 4178 391901711 391901860 4.080000e-22 117.0
17 TraesCS5A01G084700 chr2A 84.211 95 15 0 206 300 460368166 460368260 6.870000e-15 93.5
18 TraesCS5A01G084700 chr6A 97.387 421 11 0 3342 3762 593725762 593726182 0.000000e+00 717.0
19 TraesCS5A01G084700 chr6A 83.333 78 11 2 4023 4098 473608851 473608928 3.220000e-08 71.3
20 TraesCS5A01G084700 chr7A 95.238 420 20 0 3343 3762 663965038 663965457 0.000000e+00 665.0
21 TraesCS5A01G084700 chr4B 76.817 509 89 20 4288 4777 192114122 192113624 6.400000e-65 259.0
22 TraesCS5A01G084700 chr4B 90.476 126 10 2 1083 1206 192116153 192116028 1.440000e-36 165.0
23 TraesCS5A01G084700 chr4D 100.000 134 0 0 1767 1900 123688984 123688851 1.390000e-61 248.0
24 TraesCS5A01G084700 chr4D 76.331 507 95 18 4288 4777 128191463 128190965 1.390000e-61 248.0
25 TraesCS5A01G084700 chr4D 90.476 126 10 2 1083 1206 128193493 128193368 1.440000e-36 165.0
26 TraesCS5A01G084700 chr4D 79.832 119 22 2 206 323 391430747 391430630 1.150000e-12 86.1
27 TraesCS5A01G084700 chrUn 99.254 134 1 0 1767 1900 233525245 233525378 6.450000e-60 243.0
28 TraesCS5A01G084700 chrUn 99.254 134 1 0 1767 1900 257944135 257944002 6.450000e-60 243.0
29 TraesCS5A01G084700 chrUn 81.982 111 16 4 194 302 70402770 70402878 2.470000e-14 91.6
30 TraesCS5A01G084700 chr7D 99.254 134 1 0 1767 1900 578990788 578990655 6.450000e-60 243.0
31 TraesCS5A01G084700 chr7D 82.308 130 19 4 4029 4155 550977023 550977151 6.820000e-20 110.0
32 TraesCS5A01G084700 chr7D 84.536 97 15 0 206 302 271951424 271951520 5.310000e-16 97.1
33 TraesCS5A01G084700 chr7D 84.536 97 15 0 206 302 533770773 533770677 5.310000e-16 97.1
34 TraesCS5A01G084700 chr7D 84.158 101 15 1 206 305 619676307 619676407 5.310000e-16 97.1
35 TraesCS5A01G084700 chr2D 99.254 134 1 0 1767 1900 17984392 17984259 6.450000e-60 243.0
36 TraesCS5A01G084700 chr2D 99.254 134 1 0 1767 1900 306152907 306152774 6.450000e-60 243.0
37 TraesCS5A01G084700 chr2D 80.667 150 29 0 4029 4178 326206913 326206764 4.080000e-22 117.0
38 TraesCS5A01G084700 chr1D 99.254 134 1 0 1767 1900 212428891 212428758 6.450000e-60 243.0
39 TraesCS5A01G084700 chr1D 84.536 97 15 0 206 302 6819934 6819838 5.310000e-16 97.1
40 TraesCS5A01G084700 chr1D 84.158 101 15 1 206 305 305032540 305032640 5.310000e-16 97.1
41 TraesCS5A01G084700 chr4A 79.874 318 49 11 4466 4777 439009216 439009524 1.090000e-52 219.0
42 TraesCS5A01G084700 chr4A 89.683 126 11 2 1083 1206 439006969 439007094 6.680000e-35 159.0
43 TraesCS5A01G084700 chr2B 82.468 154 26 1 4026 4178 395532884 395532731 4.050000e-27 134.0
44 TraesCS5A01G084700 chr2B 82.707 133 17 5 4051 4180 26492645 26492516 5.280000e-21 113.0
45 TraesCS5A01G084700 chr6D 80.795 151 26 3 4029 4178 411616363 411616215 1.470000e-21 115.0
46 TraesCS5A01G084700 chr6D 76.471 153 33 3 4023 4172 334243667 334243819 5.350000e-11 80.5
47 TraesCS5A01G084700 chr3D 80.583 103 20 0 4052 4154 606610751 606610649 5.350000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G084700 chr5A 110377335 110383772 6437 True 11889.000000 11889 100.000000 1 6438 1 chr5A.!!$R1 6437
1 TraesCS5A01G084700 chr5D 107580442 107586533 6091 True 2269.500000 5072 93.612500 1 6438 4 chr5D.!!$R1 6437
2 TraesCS5A01G084700 chr5B 116891338 116896628 5290 True 2529.333333 3923 92.872333 844 6438 3 chr5B.!!$R1 5594
3 TraesCS5A01G084700 chr4B 192113624 192116153 2529 True 212.000000 259 83.646500 1083 4777 2 chr4B.!!$R1 3694
4 TraesCS5A01G084700 chr4D 128190965 128193493 2528 True 206.500000 248 83.403500 1083 4777 2 chr4D.!!$R3 3694

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
349 350 0.597072 GACAGAAGGACTTCCGTCGT 59.403 55.000 11.40 6.9 46.92 4.34 F
898 906 1.169577 GACACAACACAACCACCACA 58.830 50.000 0.00 0.0 0.00 4.17 F
1257 1268 0.308068 TCTCGAATCGGCTCGTGATC 59.692 55.000 1.76 0.0 39.84 2.92 F
1398 1409 0.856982 TTGGGTGGGGATTTGACACT 59.143 50.000 0.00 0.0 35.53 3.55 F
1455 1466 1.421410 GCTTTCCGATGTGCGATCGT 61.421 55.000 17.81 0.0 44.57 3.73 F
2268 2281 1.681264 CCGGTTGAAAAGAACTGGCTT 59.319 47.619 0.00 0.0 43.76 4.35 F
3372 3811 0.038455 TTGGAACCCGGGTGTATTGG 59.962 55.000 31.05 0.0 0.00 3.16 F
3374 3813 0.107361 GGAACCCGGGTGTATTGGAG 60.107 60.000 31.05 0.0 0.00 3.86 F
3375 3814 0.107361 GAACCCGGGTGTATTGGAGG 60.107 60.000 31.05 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1237 1245 0.738975 ATCACGAGCCGATTCGAGAA 59.261 50.000 7.83 0.0 41.97 2.87 R
2247 2260 1.029681 GCCAGTTCTTTTCAACCGGT 58.970 50.000 0.00 0.0 0.00 5.28 R
2248 2261 1.318576 AGCCAGTTCTTTTCAACCGG 58.681 50.000 0.00 0.0 0.00 5.28 R
3353 3792 0.038455 CCAATACACCCGGGTTCCAA 59.962 55.000 27.83 10.2 0.00 3.53 R
3355 3794 0.107361 CTCCAATACACCCGGGTTCC 60.107 60.000 27.83 0.0 0.00 3.62 R
3722 4161 0.184451 CAGGTGCATTGGAGCCCTAT 59.816 55.000 3.58 0.0 34.69 2.57 R
5260 5740 0.036105 TCATGCTTCAGCCATGACGT 60.036 50.000 0.00 0.0 41.18 4.34 R
5364 5844 3.497262 ACAAAACCGATCTTTCTCCGTTC 59.503 43.478 0.00 0.0 0.00 3.95 R
5464 5968 0.324738 TCTGGAGAAGCTGGGTCGAT 60.325 55.000 0.00 0.0 0.00 3.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 1.014352 AACGACAAACAGCAGTGTCC 58.986 50.000 0.00 0.00 40.91 4.02
53 54 1.153208 GCTCCAGTGATGAGGCAGG 60.153 63.158 0.00 0.00 0.00 4.85
67 68 2.228914 GCAGGGTATCGCGTCGTTC 61.229 63.158 5.77 0.00 0.00 3.95
79 80 1.135489 GCGTCGTTCCTCATACTGTCA 60.135 52.381 0.00 0.00 0.00 3.58
96 97 2.174639 TGTCATGGAGTGTTCTTGGGTT 59.825 45.455 0.00 0.00 0.00 4.11
115 116 2.423926 TCGACAACTTCTGACTGAGC 57.576 50.000 0.00 0.00 0.00 4.26
127 128 2.036992 CTGACTGAGCTACATCATCCCC 59.963 54.545 0.00 0.00 0.00 4.81
134 135 1.765314 GCTACATCATCCCCTGACTGT 59.235 52.381 0.00 0.00 36.48 3.55
138 139 1.064906 CATCATCCCCTGACTGTTGCT 60.065 52.381 0.00 0.00 36.48 3.91
145 146 3.844211 TCCCCTGACTGTTGCTATAGTTT 59.156 43.478 0.84 0.00 0.00 2.66
211 212 3.485463 TTTACATGGCCTCTAATCCGG 57.515 47.619 3.32 0.00 0.00 5.14
214 215 1.141053 ACATGGCCTCTAATCCGGTTC 59.859 52.381 3.32 0.00 0.00 3.62
215 216 1.140852 CATGGCCTCTAATCCGGTTCA 59.859 52.381 3.32 0.00 0.00 3.18
216 217 1.281419 TGGCCTCTAATCCGGTTCAA 58.719 50.000 3.32 0.00 0.00 2.69
227 228 2.175811 GGTTCAACATCGCCGCAC 59.824 61.111 0.00 0.00 0.00 5.34
273 274 6.205784 TCATTTTGTTCGAGAAAATGTGTCC 58.794 36.000 27.17 0.00 45.19 4.02
295 296 0.902531 TGGTCAGATCCGGGTTCTTC 59.097 55.000 0.00 2.51 0.00 2.87
302 303 0.620556 ATCCGGGTTCTTCATGTGCT 59.379 50.000 0.00 0.00 0.00 4.40
320 321 4.571984 TGTGCTATCAACACATCAGTATGC 59.428 41.667 0.00 0.00 42.88 3.14
323 324 4.319333 GCTATCAACACATCAGTATGCTGC 60.319 45.833 5.85 0.00 42.29 5.25
334 335 4.383173 TCAGTATGCTGCCATTATGACAG 58.617 43.478 5.85 4.12 42.29 3.51
339 340 2.239402 TGCTGCCATTATGACAGAAGGA 59.761 45.455 12.58 0.00 33.10 3.36
343 344 4.517285 TGCCATTATGACAGAAGGACTTC 58.483 43.478 3.91 3.91 39.78 3.01
349 350 0.597072 GACAGAAGGACTTCCGTCGT 59.403 55.000 11.40 6.90 46.92 4.34
359 360 3.426025 GGACTTCCGTCGTAACTCTTCTC 60.426 52.174 0.00 0.00 41.16 2.87
390 391 4.442332 CGGTCCAATGTATGCTTACTACCA 60.442 45.833 10.74 0.00 0.00 3.25
392 393 6.062095 GGTCCAATGTATGCTTACTACCAAT 58.938 40.000 10.74 0.00 0.00 3.16
395 396 5.241506 CCAATGTATGCTTACTACCAATGGG 59.758 44.000 3.55 0.00 41.29 4.00
471 472 5.308014 TGTATATGAATGTCATCACCTGCC 58.692 41.667 0.00 0.00 38.26 4.85
488 489 3.885297 CCTGCCGATCCTTGTTATGATTT 59.115 43.478 0.00 0.00 0.00 2.17
496 497 6.017109 CGATCCTTGTTATGATTTGGTTAGGG 60.017 42.308 0.00 0.00 0.00 3.53
499 500 6.661805 TCCTTGTTATGATTTGGTTAGGGTTC 59.338 38.462 0.00 0.00 0.00 3.62
500 501 6.435904 CCTTGTTATGATTTGGTTAGGGTTCA 59.564 38.462 0.00 0.00 0.00 3.18
502 503 6.307776 TGTTATGATTTGGTTAGGGTTCACA 58.692 36.000 0.00 0.00 0.00 3.58
598 600 9.646427 ATCTCAATTGTTTACTCTTAGACTGTC 57.354 33.333 5.13 0.00 0.00 3.51
599 601 7.808381 TCTCAATTGTTTACTCTTAGACTGTCG 59.192 37.037 5.13 0.00 0.00 4.35
600 602 7.431249 TCAATTGTTTACTCTTAGACTGTCGT 58.569 34.615 5.13 0.00 0.00 4.34
602 604 5.027206 TGTTTACTCTTAGACTGTCGTCG 57.973 43.478 1.52 0.00 44.93 5.12
654 656 5.255687 TGGTTCTATGCTTCATGTGACATT 58.744 37.500 0.00 0.00 0.00 2.71
662 664 5.190677 TGCTTCATGTGACATTCTCATCAT 58.809 37.500 0.00 0.00 29.13 2.45
681 683 8.073467 TCATCATATTGTATCGTTAGGCCATA 57.927 34.615 5.01 0.00 0.00 2.74
690 692 8.542497 TGTATCGTTAGGCCATATATTTTGAC 57.458 34.615 5.01 0.00 0.00 3.18
702 704 9.296400 GCCATATATTTTGACGTGTTGTTTTAT 57.704 29.630 0.00 0.00 0.00 1.40
746 754 4.214758 TCGATGTGAAAGTCTAGTTCGTGA 59.785 41.667 0.00 0.00 0.00 4.35
749 757 6.074516 CGATGTGAAAGTCTAGTTCGTGAAAA 60.075 38.462 0.00 0.00 0.00 2.29
840 848 1.331214 CCCACCAGTCATTGCAAGTT 58.669 50.000 4.94 0.00 0.00 2.66
841 849 2.158534 ACCCACCAGTCATTGCAAGTTA 60.159 45.455 4.94 0.00 0.00 2.24
842 850 2.489329 CCCACCAGTCATTGCAAGTTAG 59.511 50.000 4.94 0.00 0.00 2.34
852 860 4.937620 TCATTGCAAGTTAGTAGCTCCAAG 59.062 41.667 4.94 0.00 0.00 3.61
898 906 1.169577 GACACAACACAACCACCACA 58.830 50.000 0.00 0.00 0.00 4.17
900 908 1.173043 CACAACACAACCACCACACT 58.827 50.000 0.00 0.00 0.00 3.55
946 954 2.281761 ACCAAACTGGAGCAGCCG 60.282 61.111 0.00 0.00 40.96 5.52
1242 1253 2.692109 GCGCGCTTCTTCTTCTCG 59.308 61.111 26.67 0.00 0.00 4.04
1257 1268 0.308068 TCTCGAATCGGCTCGTGATC 59.692 55.000 1.76 0.00 39.84 2.92
1364 1375 4.506654 TGCTAGAATTTTCGGATAAGACGC 59.493 41.667 0.00 0.00 0.00 5.19
1398 1409 0.856982 TTGGGTGGGGATTTGACACT 59.143 50.000 0.00 0.00 35.53 3.55
1424 1435 5.869753 AGAGACTGAAAATGTGGAATTCG 57.130 39.130 0.00 0.00 0.00 3.34
1455 1466 1.421410 GCTTTCCGATGTGCGATCGT 61.421 55.000 17.81 0.00 44.57 3.73
1488 1499 7.303182 TGGACCTGTCAGTATATTTGGATAG 57.697 40.000 0.00 0.00 0.00 2.08
1700 1712 7.322664 AGATCTGTTGTTTTGTTGTGATGTTT 58.677 30.769 0.00 0.00 0.00 2.83
1981 1993 5.909621 ATGGTCATTTCTTCACCTGAATG 57.090 39.130 0.00 0.00 33.01 2.67
2240 2253 5.644644 CCTTTTCTCAACATCACATTAGCC 58.355 41.667 0.00 0.00 0.00 3.93
2242 2255 6.294675 CCTTTTCTCAACATCACATTAGCCAA 60.295 38.462 0.00 0.00 0.00 4.52
2246 2259 6.855836 TCTCAACATCACATTAGCCAATTTC 58.144 36.000 0.00 0.00 0.00 2.17
2247 2260 6.433716 TCTCAACATCACATTAGCCAATTTCA 59.566 34.615 0.00 0.00 0.00 2.69
2248 2261 6.389091 TCAACATCACATTAGCCAATTTCAC 58.611 36.000 0.00 0.00 0.00 3.18
2249 2262 5.329035 ACATCACATTAGCCAATTTCACC 57.671 39.130 0.00 0.00 0.00 4.02
2250 2263 4.142403 ACATCACATTAGCCAATTTCACCG 60.142 41.667 0.00 0.00 0.00 4.94
2251 2264 2.752354 TCACATTAGCCAATTTCACCGG 59.248 45.455 0.00 0.00 0.00 5.28
2268 2281 1.681264 CCGGTTGAAAAGAACTGGCTT 59.319 47.619 0.00 0.00 43.76 4.35
2301 2699 6.423776 AGTTCATGATTGAAATGTTTGGGT 57.576 33.333 0.00 0.00 43.29 4.51
2302 2700 6.458210 AGTTCATGATTGAAATGTTTGGGTC 58.542 36.000 0.00 0.00 43.29 4.46
2303 2701 6.268387 AGTTCATGATTGAAATGTTTGGGTCT 59.732 34.615 0.00 0.00 43.29 3.85
2305 2703 7.773489 TCATGATTGAAATGTTTGGGTCTTA 57.227 32.000 0.00 0.00 0.00 2.10
2306 2704 8.365060 TCATGATTGAAATGTTTGGGTCTTAT 57.635 30.769 0.00 0.00 0.00 1.73
2391 2805 2.224548 ACTTGCTCCTTGTAAGGTCACC 60.225 50.000 10.28 0.00 46.54 4.02
2493 2907 3.435186 GGCAAGCGTGGGAAGAGC 61.435 66.667 0.79 0.00 0.00 4.09
2616 3030 6.425210 TCTCCCATCAATCTTGATAACGAT 57.575 37.500 5.16 0.00 45.62 3.73
2789 3204 4.256920 CCATTAGTTTCTCAGAGTGTGGG 58.743 47.826 0.00 0.00 0.00 4.61
2834 3249 5.313712 TGGGACAAGGTTAAGACAATCTTC 58.686 41.667 0.00 0.00 34.57 2.87
3026 3444 5.490139 AGTTCTGCATTAACCATCATTCG 57.510 39.130 8.11 0.00 0.00 3.34
3033 3451 6.151004 TGCATTAACCATCATTCGCAATATG 58.849 36.000 0.00 0.00 0.00 1.78
3154 3572 1.868469 TGCTGCTTTGCCATTGAAAC 58.132 45.000 0.00 0.00 0.00 2.78
3230 3669 2.899303 ACCCATTCACCCTGGTAAAG 57.101 50.000 0.00 0.00 31.44 1.85
3321 3760 3.884037 ATGGTTCAGGGTTCAAGTCTT 57.116 42.857 0.00 0.00 0.00 3.01
3323 3762 2.241176 TGGTTCAGGGTTCAAGTCTTGT 59.759 45.455 12.30 0.00 0.00 3.16
3329 3768 6.488769 TCAGGGTTCAAGTCTTGTTTAGTA 57.511 37.500 12.30 0.00 0.00 1.82
3332 3771 6.766467 CAGGGTTCAAGTCTTGTTTAGTAACT 59.234 38.462 12.30 0.00 35.24 2.24
3333 3772 6.990939 AGGGTTCAAGTCTTGTTTAGTAACTC 59.009 38.462 12.30 8.14 35.24 3.01
3334 3773 6.204301 GGGTTCAAGTCTTGTTTAGTAACTCC 59.796 42.308 12.30 7.92 35.24 3.85
3335 3774 6.764560 GGTTCAAGTCTTGTTTAGTAACTCCA 59.235 38.462 12.30 0.00 35.24 3.86
3336 3775 7.281549 GGTTCAAGTCTTGTTTAGTAACTCCAA 59.718 37.037 12.30 0.00 35.24 3.53
3338 3777 7.562135 TCAAGTCTTGTTTAGTAACTCCAAGT 58.438 34.615 12.30 0.00 35.24 3.16
3339 3778 8.698210 TCAAGTCTTGTTTAGTAACTCCAAGTA 58.302 33.333 12.30 2.65 35.24 2.24
3340 3779 8.762426 CAAGTCTTGTTTAGTAACTCCAAGTAC 58.238 37.037 4.27 10.32 35.24 2.73
3342 3781 7.013655 AGTCTTGTTTAGTAACTCCAAGTACGA 59.986 37.037 12.43 0.00 35.24 3.43
3343 3782 7.325579 GTCTTGTTTAGTAACTCCAAGTACGAG 59.674 40.741 12.43 0.00 35.24 4.18
3344 3783 6.882610 TGTTTAGTAACTCCAAGTACGAGA 57.117 37.500 3.60 0.00 35.24 4.04
3345 3784 6.906659 TGTTTAGTAACTCCAAGTACGAGAG 58.093 40.000 3.60 5.92 35.24 3.20
3346 3785 6.488006 TGTTTAGTAACTCCAAGTACGAGAGT 59.512 38.462 8.99 8.99 42.58 3.24
3347 3786 7.521099 TGTTTAGTAACTCCAAGTACGAGAGTG 60.521 40.741 13.84 0.00 39.92 3.51
3360 3799 3.146847 ACGAGAGTGGATTTTTGGAACC 58.853 45.455 0.00 0.00 46.97 3.62
3361 3800 2.488153 CGAGAGTGGATTTTTGGAACCC 59.512 50.000 0.00 0.00 0.00 4.11
3362 3801 2.488153 GAGAGTGGATTTTTGGAACCCG 59.512 50.000 0.00 0.00 0.00 5.28
3363 3802 1.544246 GAGTGGATTTTTGGAACCCGG 59.456 52.381 0.00 0.00 0.00 5.73
3364 3803 0.606096 GTGGATTTTTGGAACCCGGG 59.394 55.000 22.25 22.25 0.00 5.73
3365 3804 0.188834 TGGATTTTTGGAACCCGGGT 59.811 50.000 24.16 24.16 0.00 5.28
3366 3805 0.606096 GGATTTTTGGAACCCGGGTG 59.394 55.000 31.05 0.00 0.00 4.61
3367 3806 1.334160 GATTTTTGGAACCCGGGTGT 58.666 50.000 31.05 17.87 0.00 4.16
3368 3807 2.516906 GATTTTTGGAACCCGGGTGTA 58.483 47.619 31.05 14.25 0.00 2.90
3369 3808 2.679429 TTTTTGGAACCCGGGTGTAT 57.321 45.000 31.05 12.67 0.00 2.29
3370 3809 2.679429 TTTTGGAACCCGGGTGTATT 57.321 45.000 31.05 12.19 0.00 1.89
3371 3810 1.912417 TTTGGAACCCGGGTGTATTG 58.088 50.000 31.05 0.00 0.00 1.90
3372 3811 0.038455 TTGGAACCCGGGTGTATTGG 59.962 55.000 31.05 0.00 0.00 3.16
3373 3812 0.841158 TGGAACCCGGGTGTATTGGA 60.841 55.000 31.05 4.09 0.00 3.53
3374 3813 0.107361 GGAACCCGGGTGTATTGGAG 60.107 60.000 31.05 0.00 0.00 3.86
3375 3814 0.107361 GAACCCGGGTGTATTGGAGG 60.107 60.000 31.05 0.00 0.00 4.30
3376 3815 0.548197 AACCCGGGTGTATTGGAGGA 60.548 55.000 31.05 0.00 0.00 3.71
3377 3816 1.269703 ACCCGGGTGTATTGGAGGAC 61.270 60.000 29.69 0.00 0.00 3.85
3378 3817 1.525442 CCGGGTGTATTGGAGGACC 59.475 63.158 0.00 0.00 0.00 4.46
3379 3818 0.981277 CCGGGTGTATTGGAGGACCT 60.981 60.000 0.00 0.00 37.04 3.85
3380 3819 0.909623 CGGGTGTATTGGAGGACCTT 59.090 55.000 0.00 0.00 37.04 3.50
3381 3820 2.112998 CGGGTGTATTGGAGGACCTTA 58.887 52.381 0.00 0.00 37.04 2.69
3382 3821 2.704065 CGGGTGTATTGGAGGACCTTAT 59.296 50.000 0.00 0.00 37.04 1.73
3383 3822 3.135895 CGGGTGTATTGGAGGACCTTATT 59.864 47.826 0.00 0.00 37.04 1.40
3384 3823 4.384868 CGGGTGTATTGGAGGACCTTATTT 60.385 45.833 0.00 0.00 37.04 1.40
3385 3824 5.516044 GGGTGTATTGGAGGACCTTATTTT 58.484 41.667 0.00 0.00 37.04 1.82
3386 3825 6.633127 CGGGTGTATTGGAGGACCTTATTTTA 60.633 42.308 0.00 0.00 37.04 1.52
3387 3826 7.120716 GGGTGTATTGGAGGACCTTATTTTAA 58.879 38.462 0.00 0.00 37.04 1.52
3388 3827 7.616542 GGGTGTATTGGAGGACCTTATTTTAAA 59.383 37.037 0.00 0.00 37.04 1.52
3389 3828 9.197306 GGTGTATTGGAGGACCTTATTTTAAAT 57.803 33.333 0.00 0.00 37.04 1.40
3484 3923 5.830912 ACACATGTGTAAAGTTTGGTGATG 58.169 37.500 29.66 0.00 42.90 3.07
3485 3924 5.592282 ACACATGTGTAAAGTTTGGTGATGA 59.408 36.000 29.66 0.00 42.90 2.92
3486 3925 6.096141 ACACATGTGTAAAGTTTGGTGATGAA 59.904 34.615 29.66 0.00 42.90 2.57
3487 3926 6.977502 CACATGTGTAAAGTTTGGTGATGAAA 59.022 34.615 18.03 0.00 0.00 2.69
3488 3927 7.652909 CACATGTGTAAAGTTTGGTGATGAAAT 59.347 33.333 18.03 0.00 0.00 2.17
3489 3928 8.855110 ACATGTGTAAAGTTTGGTGATGAAATA 58.145 29.630 0.00 0.00 0.00 1.40
3490 3929 9.689976 CATGTGTAAAGTTTGGTGATGAAATAA 57.310 29.630 0.00 0.00 0.00 1.40
3491 3930 9.912634 ATGTGTAAAGTTTGGTGATGAAATAAG 57.087 29.630 0.00 0.00 0.00 1.73
3492 3931 8.908903 TGTGTAAAGTTTGGTGATGAAATAAGT 58.091 29.630 0.00 0.00 0.00 2.24
3504 3943 9.463443 GGTGATGAAATAAGTAAATATGCAACC 57.537 33.333 0.00 0.00 0.00 3.77
3516 3955 9.638239 AGTAAATATGCAACCTACACAAAAATG 57.362 29.630 0.00 0.00 0.00 2.32
3517 3956 9.632807 GTAAATATGCAACCTACACAAAAATGA 57.367 29.630 0.00 0.00 0.00 2.57
3518 3957 8.532977 AAATATGCAACCTACACAAAAATGAC 57.467 30.769 0.00 0.00 0.00 3.06
3519 3958 4.991153 TGCAACCTACACAAAAATGACA 57.009 36.364 0.00 0.00 0.00 3.58
3520 3959 5.330455 TGCAACCTACACAAAAATGACAA 57.670 34.783 0.00 0.00 0.00 3.18
3521 3960 5.724328 TGCAACCTACACAAAAATGACAAA 58.276 33.333 0.00 0.00 0.00 2.83
3522 3961 6.166279 TGCAACCTACACAAAAATGACAAAA 58.834 32.000 0.00 0.00 0.00 2.44
3523 3962 6.820656 TGCAACCTACACAAAAATGACAAAAT 59.179 30.769 0.00 0.00 0.00 1.82
3524 3963 7.125113 GCAACCTACACAAAAATGACAAAATG 58.875 34.615 0.00 0.00 0.00 2.32
3525 3964 7.629130 CAACCTACACAAAAATGACAAAATGG 58.371 34.615 0.00 0.00 0.00 3.16
3526 3965 6.883744 ACCTACACAAAAATGACAAAATGGT 58.116 32.000 0.00 0.00 0.00 3.55
3527 3966 6.760770 ACCTACACAAAAATGACAAAATGGTG 59.239 34.615 0.00 0.00 0.00 4.17
3528 3967 6.983307 CCTACACAAAAATGACAAAATGGTGA 59.017 34.615 0.00 0.00 0.00 4.02
3529 3968 7.656948 CCTACACAAAAATGACAAAATGGTGAT 59.343 33.333 0.00 0.00 0.00 3.06
3530 3969 7.862512 ACACAAAAATGACAAAATGGTGATT 57.137 28.000 0.00 0.00 0.00 2.57
3531 3970 8.278729 ACACAAAAATGACAAAATGGTGATTT 57.721 26.923 0.00 0.00 36.38 2.17
3532 3971 8.397148 ACACAAAAATGACAAAATGGTGATTTC 58.603 29.630 0.00 0.00 34.25 2.17
3533 3972 7.856894 CACAAAAATGACAAAATGGTGATTTCC 59.143 33.333 0.00 0.00 34.25 3.13
3534 3973 7.555554 ACAAAAATGACAAAATGGTGATTTCCA 59.444 29.630 0.00 0.00 34.25 3.53
3535 3974 8.404000 CAAAAATGACAAAATGGTGATTTCCAA 58.596 29.630 0.00 0.00 41.09 3.53
3536 3975 8.517062 AAAATGACAAAATGGTGATTTCCAAA 57.483 26.923 0.00 0.00 41.09 3.28
3537 3976 8.694581 AAATGACAAAATGGTGATTTCCAAAT 57.305 26.923 0.00 0.00 41.09 2.32
3538 3977 9.790344 AAATGACAAAATGGTGATTTCCAAATA 57.210 25.926 0.00 0.00 41.09 1.40
3539 3978 9.439500 AATGACAAAATGGTGATTTCCAAATAG 57.561 29.630 0.00 0.00 41.09 1.73
3540 3979 7.961351 TGACAAAATGGTGATTTCCAAATAGT 58.039 30.769 0.00 0.00 41.09 2.12
3541 3980 7.871973 TGACAAAATGGTGATTTCCAAATAGTG 59.128 33.333 0.00 0.00 41.09 2.74
3542 3981 7.961351 ACAAAATGGTGATTTCCAAATAGTGA 58.039 30.769 0.00 0.00 41.09 3.41
3543 3982 8.428063 ACAAAATGGTGATTTCCAAATAGTGAA 58.572 29.630 0.00 0.00 41.09 3.18
3544 3983 9.439500 CAAAATGGTGATTTCCAAATAGTGAAT 57.561 29.630 0.00 0.00 41.09 2.57
3549 3988 8.250332 TGGTGATTTCCAAATAGTGAATAAAGC 58.750 33.333 0.00 0.00 34.24 3.51
3550 3989 8.250332 GGTGATTTCCAAATAGTGAATAAAGCA 58.750 33.333 0.00 0.00 0.00 3.91
3551 3990 9.807649 GTGATTTCCAAATAGTGAATAAAGCAT 57.192 29.630 0.00 0.00 29.00 3.79
3552 3991 9.806203 TGATTTCCAAATAGTGAATAAAGCATG 57.194 29.630 0.00 0.00 0.00 4.06
3553 3992 8.652810 ATTTCCAAATAGTGAATAAAGCATGC 57.347 30.769 10.51 10.51 0.00 4.06
3554 3993 6.772360 TCCAAATAGTGAATAAAGCATGCA 57.228 33.333 21.98 0.00 0.00 3.96
3555 3994 6.563422 TCCAAATAGTGAATAAAGCATGCAC 58.437 36.000 21.98 7.24 42.93 4.57
3561 4000 4.797471 GTGAATAAAGCATGCACTGTTCA 58.203 39.130 21.98 20.78 39.81 3.18
3562 4001 5.404946 GTGAATAAAGCATGCACTGTTCAT 58.595 37.500 24.01 1.81 39.81 2.57
3563 4002 5.514204 GTGAATAAAGCATGCACTGTTCATC 59.486 40.000 24.01 17.11 39.81 2.92
3564 4003 5.416639 TGAATAAAGCATGCACTGTTCATCT 59.583 36.000 21.98 0.00 0.00 2.90
3565 4004 5.909621 ATAAAGCATGCACTGTTCATCTT 57.090 34.783 21.98 0.00 0.00 2.40
3566 4005 4.595762 AAAGCATGCACTGTTCATCTTT 57.404 36.364 21.98 4.40 0.00 2.52
3567 4006 3.844577 AGCATGCACTGTTCATCTTTC 57.155 42.857 21.98 0.00 0.00 2.62
3568 4007 2.490903 AGCATGCACTGTTCATCTTTCC 59.509 45.455 21.98 0.00 0.00 3.13
3569 4008 2.229543 GCATGCACTGTTCATCTTTCCA 59.770 45.455 14.21 0.00 0.00 3.53
3570 4009 3.305539 GCATGCACTGTTCATCTTTCCAA 60.306 43.478 14.21 0.00 0.00 3.53
3571 4010 4.796946 GCATGCACTGTTCATCTTTCCAAA 60.797 41.667 14.21 0.00 0.00 3.28
3572 4011 4.998671 TGCACTGTTCATCTTTCCAAAA 57.001 36.364 0.00 0.00 0.00 2.44
3573 4012 5.534207 TGCACTGTTCATCTTTCCAAAAT 57.466 34.783 0.00 0.00 0.00 1.82
3574 4013 5.531634 TGCACTGTTCATCTTTCCAAAATC 58.468 37.500 0.00 0.00 0.00 2.17
3575 4014 5.068855 TGCACTGTTCATCTTTCCAAAATCA 59.931 36.000 0.00 0.00 0.00 2.57
3576 4015 5.403466 GCACTGTTCATCTTTCCAAAATCAC 59.597 40.000 0.00 0.00 0.00 3.06
3577 4016 5.626543 CACTGTTCATCTTTCCAAAATCACG 59.373 40.000 0.00 0.00 0.00 4.35
3578 4017 5.530915 ACTGTTCATCTTTCCAAAATCACGA 59.469 36.000 0.00 0.00 0.00 4.35
3579 4018 6.207417 ACTGTTCATCTTTCCAAAATCACGAT 59.793 34.615 0.00 0.00 0.00 3.73
3580 4019 6.980593 TGTTCATCTTTCCAAAATCACGATT 58.019 32.000 0.00 0.00 0.00 3.34
3581 4020 7.432869 TGTTCATCTTTCCAAAATCACGATTT 58.567 30.769 0.00 0.00 42.35 2.17
3595 4034 7.769272 AATCACGATTTTGTCATTTTTGTGT 57.231 28.000 0.00 0.00 0.00 3.72
3596 4035 8.864069 AATCACGATTTTGTCATTTTTGTGTA 57.136 26.923 0.00 0.00 0.00 2.90
3597 4036 8.864069 ATCACGATTTTGTCATTTTTGTGTAA 57.136 26.923 0.00 0.00 0.00 2.41
3598 4037 8.109843 TCACGATTTTGTCATTTTTGTGTAAC 57.890 30.769 0.00 0.00 37.35 2.50
3599 4038 7.971168 TCACGATTTTGTCATTTTTGTGTAACT 59.029 29.630 0.00 0.00 38.04 2.24
3600 4039 8.259194 CACGATTTTGTCATTTTTGTGTAACTC 58.741 33.333 0.00 0.00 38.04 3.01
3601 4040 7.165154 ACGATTTTGTCATTTTTGTGTAACTCG 59.835 33.333 0.00 0.00 38.04 4.18
3602 4041 6.561945 TTTTGTCATTTTTGTGTAACTCGC 57.438 33.333 0.00 0.00 38.04 5.03
3603 4042 4.884458 TGTCATTTTTGTGTAACTCGCA 57.116 36.364 0.00 0.00 38.04 5.10
3604 4043 5.431420 TGTCATTTTTGTGTAACTCGCAT 57.569 34.783 0.00 0.00 38.04 4.73
3605 4044 5.211454 TGTCATTTTTGTGTAACTCGCATG 58.789 37.500 0.00 0.00 38.04 4.06
3606 4045 4.616802 GTCATTTTTGTGTAACTCGCATGG 59.383 41.667 0.00 0.00 38.04 3.66
3607 4046 4.277174 TCATTTTTGTGTAACTCGCATGGT 59.723 37.500 0.00 0.00 38.04 3.55
3608 4047 4.640789 TTTTTGTGTAACTCGCATGGTT 57.359 36.364 0.00 0.00 38.04 3.67
3609 4048 5.752892 TTTTTGTGTAACTCGCATGGTTA 57.247 34.783 0.00 0.00 38.04 2.85
3610 4049 4.735662 TTTGTGTAACTCGCATGGTTAC 57.264 40.909 13.49 13.49 45.18 2.50
3611 4050 3.671008 TGTGTAACTCGCATGGTTACT 57.329 42.857 18.35 0.00 45.19 2.24
3612 4051 3.997762 TGTGTAACTCGCATGGTTACTT 58.002 40.909 18.35 0.00 45.19 2.24
3613 4052 5.136816 TGTGTAACTCGCATGGTTACTTA 57.863 39.130 18.35 9.12 45.19 2.24
3614 4053 5.726397 TGTGTAACTCGCATGGTTACTTAT 58.274 37.500 18.35 0.00 45.19 1.73
3615 4054 6.167685 TGTGTAACTCGCATGGTTACTTATT 58.832 36.000 18.35 0.00 45.19 1.40
3616 4055 6.651643 TGTGTAACTCGCATGGTTACTTATTT 59.348 34.615 18.35 0.00 45.19 1.40
3617 4056 7.148540 TGTGTAACTCGCATGGTTACTTATTTC 60.149 37.037 18.35 7.82 45.19 2.17
3618 4057 6.874664 TGTAACTCGCATGGTTACTTATTTCA 59.125 34.615 18.35 1.51 45.19 2.69
3619 4058 6.422776 AACTCGCATGGTTACTTATTTCAG 57.577 37.500 0.00 0.00 0.00 3.02
3620 4059 4.332819 ACTCGCATGGTTACTTATTTCAGC 59.667 41.667 0.00 0.00 0.00 4.26
3621 4060 4.257731 TCGCATGGTTACTTATTTCAGCA 58.742 39.130 0.00 0.00 0.00 4.41
3622 4061 4.881273 TCGCATGGTTACTTATTTCAGCAT 59.119 37.500 0.00 0.00 0.00 3.79
3623 4062 5.007626 TCGCATGGTTACTTATTTCAGCATC 59.992 40.000 0.00 0.00 0.00 3.91
3624 4063 5.220835 CGCATGGTTACTTATTTCAGCATCA 60.221 40.000 0.00 0.00 0.00 3.07
3625 4064 6.563422 GCATGGTTACTTATTTCAGCATCAA 58.437 36.000 0.00 0.00 0.00 2.57
3626 4065 7.035004 GCATGGTTACTTATTTCAGCATCAAA 58.965 34.615 0.00 0.00 0.00 2.69
3627 4066 7.009540 GCATGGTTACTTATTTCAGCATCAAAC 59.990 37.037 0.00 0.00 0.00 2.93
3628 4067 7.759489 TGGTTACTTATTTCAGCATCAAACT 57.241 32.000 0.00 0.00 0.00 2.66
3629 4068 8.177119 TGGTTACTTATTTCAGCATCAAACTT 57.823 30.769 0.00 0.00 0.00 2.66
3630 4069 8.637986 TGGTTACTTATTTCAGCATCAAACTTT 58.362 29.630 0.00 0.00 0.00 2.66
3631 4070 8.915654 GGTTACTTATTTCAGCATCAAACTTTG 58.084 33.333 0.00 0.00 0.00 2.77
3632 4071 8.427774 GTTACTTATTTCAGCATCAAACTTTGC 58.572 33.333 0.00 0.00 39.17 3.68
3633 4072 6.514947 ACTTATTTCAGCATCAAACTTTGCA 58.485 32.000 0.00 0.00 41.35 4.08
3634 4073 6.421801 ACTTATTTCAGCATCAAACTTTGCAC 59.578 34.615 0.00 0.00 41.35 4.57
3635 4074 3.797451 TTCAGCATCAAACTTTGCACA 57.203 38.095 0.00 0.00 41.35 4.57
3636 4075 4.325028 TTCAGCATCAAACTTTGCACAT 57.675 36.364 0.00 0.00 41.35 3.21
3637 4076 3.644823 TCAGCATCAAACTTTGCACATG 58.355 40.909 0.00 0.00 41.35 3.21
3638 4077 3.068448 TCAGCATCAAACTTTGCACATGT 59.932 39.130 0.00 0.00 41.35 3.21
3639 4078 3.183574 CAGCATCAAACTTTGCACATGTG 59.816 43.478 21.83 21.83 41.35 3.21
3640 4079 3.125316 GCATCAAACTTTGCACATGTGT 58.875 40.909 26.01 3.79 38.72 3.72
3641 4080 4.037803 AGCATCAAACTTTGCACATGTGTA 59.962 37.500 26.01 20.04 41.35 2.90
3642 4081 4.744137 GCATCAAACTTTGCACATGTGTAA 59.256 37.500 23.30 23.30 38.72 2.41
3643 4082 5.406175 GCATCAAACTTTGCACATGTGTAAT 59.594 36.000 26.72 12.78 38.72 1.89
3644 4083 6.585702 GCATCAAACTTTGCACATGTGTAATA 59.414 34.615 26.72 17.10 38.72 0.98
3645 4084 7.276218 GCATCAAACTTTGCACATGTGTAATAT 59.724 33.333 26.72 16.42 38.72 1.28
3646 4085 9.786105 CATCAAACTTTGCACATGTGTAATATA 57.214 29.630 26.72 13.49 35.24 0.86
3648 4087 9.225436 TCAAACTTTGCACATGTGTAATATAGA 57.775 29.630 26.72 18.21 35.24 1.98
3652 4091 9.394767 ACTTTGCACATGTGTAATATAGATTCA 57.605 29.630 26.72 10.24 35.24 2.57
3709 4148 8.555361 TGTAAAACTTCAAAATAGCATTTTGGC 58.445 29.630 22.68 0.00 39.25 4.52
3710 4149 7.565323 AAAACTTCAAAATAGCATTTTGGCA 57.435 28.000 22.68 14.50 39.25 4.92
3711 4150 6.544038 AACTTCAAAATAGCATTTTGGCAC 57.456 33.333 22.68 0.00 39.25 5.01
3712 4151 5.609423 ACTTCAAAATAGCATTTTGGCACA 58.391 33.333 22.68 9.88 39.25 4.57
3713 4152 5.697633 ACTTCAAAATAGCATTTTGGCACAG 59.302 36.000 22.68 17.77 42.39 3.66
3714 4153 5.212532 TCAAAATAGCATTTTGGCACAGT 57.787 34.783 22.68 0.00 42.39 3.55
3715 4154 5.609423 TCAAAATAGCATTTTGGCACAGTT 58.391 33.333 22.68 0.00 42.39 3.16
3716 4155 5.695816 TCAAAATAGCATTTTGGCACAGTTC 59.304 36.000 22.68 0.00 42.39 3.01
3717 4156 4.870123 AATAGCATTTTGGCACAGTTCA 57.130 36.364 0.00 0.00 42.39 3.18
3718 4157 4.870123 ATAGCATTTTGGCACAGTTCAA 57.130 36.364 0.00 0.00 42.39 2.69
3719 4158 3.540314 AGCATTTTGGCACAGTTCAAA 57.460 38.095 0.00 0.00 42.39 2.69
3720 4159 3.871485 AGCATTTTGGCACAGTTCAAAA 58.129 36.364 11.75 11.75 43.87 2.44
3721 4160 4.260170 AGCATTTTGGCACAGTTCAAAAA 58.740 34.783 12.84 2.55 43.27 1.94
3738 4177 3.893326 AAAAATAGGGCTCCAATGCAC 57.107 42.857 0.00 0.00 36.44 4.57
3739 4178 1.780503 AAATAGGGCTCCAATGCACC 58.219 50.000 0.00 0.00 36.97 5.01
3740 4179 0.929244 AATAGGGCTCCAATGCACCT 59.071 50.000 0.00 0.00 36.97 4.00
3741 4180 0.184451 ATAGGGCTCCAATGCACCTG 59.816 55.000 0.00 0.00 36.97 4.00
3742 4181 1.925285 TAGGGCTCCAATGCACCTGG 61.925 60.000 9.95 9.95 36.97 4.45
3743 4182 2.757099 GGCTCCAATGCACCTGGG 60.757 66.667 15.06 8.27 34.46 4.45
3744 4183 2.036256 GCTCCAATGCACCTGGGT 59.964 61.111 15.06 0.00 34.46 4.51
3745 4184 1.607467 GCTCCAATGCACCTGGGTT 60.607 57.895 15.06 0.00 34.46 4.11
3746 4185 1.598701 GCTCCAATGCACCTGGGTTC 61.599 60.000 15.06 3.37 34.46 3.62
3747 4186 0.967380 CTCCAATGCACCTGGGTTCC 60.967 60.000 15.06 0.00 34.46 3.62
3748 4187 1.228831 CCAATGCACCTGGGTTCCA 60.229 57.895 8.54 0.00 0.00 3.53
3749 4188 0.831288 CCAATGCACCTGGGTTCCAA 60.831 55.000 8.54 0.00 30.80 3.53
3750 4189 1.047002 CAATGCACCTGGGTTCCAAA 58.953 50.000 0.00 0.00 30.80 3.28
3751 4190 1.001181 CAATGCACCTGGGTTCCAAAG 59.999 52.381 0.00 0.00 30.80 2.77
3752 4191 0.188342 ATGCACCTGGGTTCCAAAGT 59.812 50.000 0.00 0.00 30.80 2.66
3753 4192 0.754957 TGCACCTGGGTTCCAAAGTG 60.755 55.000 0.00 10.62 39.44 3.16
3754 4193 0.467290 GCACCTGGGTTCCAAAGTGA 60.467 55.000 16.32 0.00 39.04 3.41
3755 4194 1.318576 CACCTGGGTTCCAAAGTGAC 58.681 55.000 9.79 0.00 39.04 3.67
3756 4195 1.133792 CACCTGGGTTCCAAAGTGACT 60.134 52.381 9.79 0.00 39.04 3.41
3757 4196 1.569072 ACCTGGGTTCCAAAGTGACTT 59.431 47.619 0.00 0.00 30.80 3.01
3758 4197 2.024369 ACCTGGGTTCCAAAGTGACTTT 60.024 45.455 4.45 4.45 33.58 2.66
3759 4198 3.031013 CCTGGGTTCCAAAGTGACTTTT 58.969 45.455 8.03 0.00 30.60 2.27
3760 4199 3.450817 CCTGGGTTCCAAAGTGACTTTTT 59.549 43.478 8.03 0.00 30.60 1.94
3761 4200 4.432712 CTGGGTTCCAAAGTGACTTTTTG 58.567 43.478 8.03 3.03 35.75 2.44
3766 4205 1.484240 CCAAAGTGACTTTTTGCCCCA 59.516 47.619 8.03 0.00 34.88 4.96
3770 4209 3.306472 AGTGACTTTTTGCCCCAAGTA 57.694 42.857 0.00 0.00 33.22 2.24
3782 4221 8.658840 TTTTGCCCCAAGTACTTATTTTATCT 57.341 30.769 8.04 0.00 0.00 1.98
3803 4242 9.916360 TTATCTCTGTACTAATAACTCTGACCA 57.084 33.333 0.00 0.00 0.00 4.02
3960 4416 5.357032 CCGCTTCATATAAATGATTACCCCC 59.643 44.000 0.00 0.00 41.73 5.40
3981 4437 5.338219 CCCCTCCATTTCAAAATACATTGCA 60.338 40.000 0.00 0.00 0.00 4.08
4063 4526 9.066892 ACATCTGCGATACCAAATAAATACAAT 57.933 29.630 0.00 0.00 0.00 2.71
4123 4586 9.996554 TTCATTCGGTATTGTAGATGTTGATAT 57.003 29.630 0.00 0.00 0.00 1.63
4180 4645 5.452636 TTTGGCTTGGGACAAAACTAATGTC 60.453 40.000 0.00 0.00 46.22 3.06
4215 4680 5.897250 TGAAATGGAGGTAGTAGCATCTACA 59.103 40.000 16.26 0.00 41.20 2.74
4218 4683 4.868268 TGGAGGTAGTAGCATCTACAGTT 58.132 43.478 16.26 5.36 41.20 3.16
4237 4702 7.169158 ACAGTTGTATTTGGATTAACATGGG 57.831 36.000 0.00 0.00 0.00 4.00
4240 4705 8.477256 CAGTTGTATTTGGATTAACATGGGATT 58.523 33.333 0.00 0.00 0.00 3.01
4250 4715 9.135189 TGGATTAACATGGGATTCTTCATTTAG 57.865 33.333 0.00 0.00 0.00 1.85
4282 4747 9.941325 AATGGAAATTCATGCAAGTAACATTTA 57.059 25.926 0.00 0.00 0.00 1.40
4513 4992 4.215185 GCTTCAGAGCTAGGAAATTATGCC 59.785 45.833 0.00 0.00 45.65 4.40
4602 5081 6.069381 AGGAACCTGGAATCTTATAGCTTTGT 60.069 38.462 0.00 0.00 0.00 2.83
4689 5168 2.335092 ATCCTGATGGCCGCAAGAGG 62.335 60.000 0.00 0.00 43.02 3.69
4827 5306 0.823356 TTTCCCAACCACTCAGCTGC 60.823 55.000 9.47 0.00 0.00 5.25
5085 5565 7.222417 CAGCTTCTCTAACACAGAACTCATATG 59.778 40.741 0.00 0.00 31.12 1.78
5140 5620 9.555727 GTTAGCTGTGGATTTAGTATATTCCAA 57.444 33.333 0.00 0.00 35.71 3.53
5167 5647 0.413037 TGTTTGGCCATTCCCATCCT 59.587 50.000 6.09 0.00 34.21 3.24
5260 5740 3.090790 TCTGCAAGCAAGCCATTGATTA 58.909 40.909 0.00 0.00 42.93 1.75
5299 5779 6.202762 GCATGATTCGTCATTGTATAGTTCCA 59.797 38.462 0.00 0.00 0.00 3.53
5364 5844 3.183574 TGAACAACTATTCGTGTGAAGCG 59.816 43.478 0.00 0.00 37.57 4.68
5464 5968 6.095860 CCAAGGCACAATGAGATCAAGATAAA 59.904 38.462 0.00 0.00 0.00 1.40
5472 5976 5.869649 TGAGATCAAGATAAATCGACCCA 57.130 39.130 0.00 0.00 0.00 4.51
5514 6018 2.116827 TTTGGTTCTGTTGTGTCCGT 57.883 45.000 0.00 0.00 0.00 4.69
5524 6028 2.431419 TGTTGTGTCCGTAACTTCCTGA 59.569 45.455 0.00 0.00 0.00 3.86
5534 6038 2.587194 CTTCCTGATGGAGCGGCG 60.587 66.667 0.51 0.51 44.24 6.46
5638 6142 6.014156 AGCTCTACCTTAGCAAGAAAGAAGAA 60.014 38.462 0.00 0.00 42.62 2.52
5641 6145 8.140112 TCTACCTTAGCAAGAAAGAAGAAGAT 57.860 34.615 0.00 0.00 0.00 2.40
5642 6146 8.037758 TCTACCTTAGCAAGAAAGAAGAAGATG 58.962 37.037 0.00 0.00 0.00 2.90
5643 6147 5.414144 ACCTTAGCAAGAAAGAAGAAGATGC 59.586 40.000 0.00 0.00 0.00 3.91
5751 6255 4.092091 GCACTCTGCTACATTAACTGTGAC 59.908 45.833 0.00 0.00 40.96 3.67
5798 6385 5.163804 CGCACCTTGCAATACAGTTATGTTA 60.164 40.000 0.00 0.00 45.36 2.41
5834 6421 6.205464 ACATTGACACTCTTATCCACAAACTG 59.795 38.462 0.00 0.00 0.00 3.16
5865 6452 1.006758 TGTCGGAGATACTCTTGGGGT 59.993 52.381 0.00 0.00 40.67 4.95
5866 6453 2.108970 GTCGGAGATACTCTTGGGGTT 58.891 52.381 0.00 0.00 40.67 4.11
5897 6484 2.062971 ATGCATGTTTCCTGCCTAGG 57.937 50.000 3.67 3.67 46.06 3.02
5954 6604 2.101582 GCACCATGGTTGTTTGGTTGTA 59.898 45.455 16.84 0.00 43.73 2.41
5960 6610 1.265905 GGTTGTTTGGTTGTAGCCTCG 59.734 52.381 0.00 0.00 0.00 4.63
6022 6673 8.668510 ATGTGCTTATTTCTAATCTACTGTGG 57.331 34.615 0.00 0.00 0.00 4.17
6121 6774 0.322322 ATGCCACCAAATGCAACCTG 59.678 50.000 0.00 0.00 41.50 4.00
6132 6785 1.429930 TGCAACCTGAGTGTTAGGGA 58.570 50.000 0.00 0.00 39.71 4.20
6148 6801 1.034292 GGGATGCTTGGCAAGGAGAC 61.034 60.000 27.25 20.94 43.62 3.36
6160 6813 3.090532 GGAGACCGGGGCCTTCAT 61.091 66.667 6.32 0.00 0.00 2.57
6205 6858 7.227156 GCATATGAAGAGAAGAGGGGAAAATA 58.773 38.462 6.97 0.00 0.00 1.40
6268 6921 6.146673 ACGATAAAACGTTGGTAGAAGAAAGG 59.853 38.462 0.00 0.00 44.14 3.11
6292 6945 5.447624 AGTGGGGACGTAAGAAAATTTTG 57.552 39.130 8.47 0.00 43.62 2.44
6300 6953 3.987220 CGTAAGAAAATTTTGGCACCCTG 59.013 43.478 8.47 0.00 43.02 4.45
6303 6956 5.622346 AAGAAAATTTTGGCACCCTGTTA 57.378 34.783 8.47 0.00 0.00 2.41
6329 6983 5.179533 GTGTTGGGTAATTGTGTGGTTTTT 58.820 37.500 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 1.610673 ATCACTGGAGCGGGACACT 60.611 57.895 0.00 0.00 0.00 3.55
33 34 2.202987 GCCTCATCACTGGAGCGG 60.203 66.667 0.00 0.00 0.00 5.52
53 54 0.030369 ATGAGGAACGACGCGATACC 59.970 55.000 15.93 8.78 0.00 2.73
67 68 4.161189 AGAACACTCCATGACAGTATGAGG 59.839 45.833 0.00 0.00 39.69 3.86
79 80 1.697432 TCGAACCCAAGAACACTCCAT 59.303 47.619 0.00 0.00 0.00 3.41
96 97 1.957177 AGCTCAGTCAGAAGTTGTCGA 59.043 47.619 0.00 0.00 0.00 4.20
115 116 3.801698 CAACAGTCAGGGGATGATGTAG 58.198 50.000 0.00 0.00 40.92 2.74
145 146 6.880942 AAACAACTATAGTACCCGCAAAAA 57.119 33.333 5.65 0.00 0.00 1.94
167 168 8.994429 AATTGTACTGAACATTGTCACAAAAA 57.006 26.923 0.00 0.00 38.10 1.94
184 185 6.998673 GGATTAGAGGCCATGTAAATTGTACT 59.001 38.462 5.01 0.00 0.00 2.73
190 191 3.394606 ACCGGATTAGAGGCCATGTAAAT 59.605 43.478 9.46 0.00 0.00 1.40
211 212 2.202171 CGTGCGGCGATGTTGAAC 60.202 61.111 12.98 0.00 44.77 3.18
227 228 4.847365 ATGTCGATCTCAATGTGTTTCG 57.153 40.909 0.00 4.84 0.00 3.46
237 238 5.637387 TCGAACAAAATGAATGTCGATCTCA 59.363 36.000 0.00 0.00 30.87 3.27
273 274 0.107654 GAACCCGGATCTGACCAAGG 60.108 60.000 0.73 0.00 0.00 3.61
323 324 4.122776 CGGAAGTCCTTCTGTCATAATGG 58.877 47.826 7.56 0.00 40.24 3.16
343 344 1.062294 CTCGGAGAAGAGTTACGACGG 59.938 57.143 0.00 0.00 34.09 4.79
375 376 3.742954 CGCCCATTGGTAGTAAGCATACA 60.743 47.826 1.44 0.00 34.29 2.29
376 377 2.806244 CGCCCATTGGTAGTAAGCATAC 59.194 50.000 1.20 0.00 32.06 2.39
390 391 1.526575 CCTCAACTTGTGCGCCCATT 61.527 55.000 4.18 0.00 0.00 3.16
392 393 2.594303 CCTCAACTTGTGCGCCCA 60.594 61.111 4.18 0.00 0.00 5.36
395 396 3.365265 CCCCCTCAACTTGTGCGC 61.365 66.667 0.00 0.00 0.00 6.09
471 472 6.017109 CCCTAACCAAATCATAACAAGGATCG 60.017 42.308 0.00 0.00 0.00 3.69
488 489 4.324254 GGAGATCAATGTGAACCCTAACCA 60.324 45.833 0.00 0.00 0.00 3.67
496 497 3.350833 AGCCTTGGAGATCAATGTGAAC 58.649 45.455 0.00 0.00 34.45 3.18
499 500 3.087031 ACAAGCCTTGGAGATCAATGTG 58.913 45.455 9.64 0.00 34.45 3.21
500 501 3.446442 ACAAGCCTTGGAGATCAATGT 57.554 42.857 9.64 0.00 34.45 2.71
502 503 3.372025 GGGTACAAGCCTTGGAGATCAAT 60.372 47.826 9.64 0.00 34.45 2.57
618 620 7.129457 AGCATAGAACCAATCTAACATCTCA 57.871 36.000 0.00 0.00 43.73 3.27
654 656 6.210584 TGGCCTAACGATACAATATGATGAGA 59.789 38.462 3.32 0.00 0.00 3.27
722 730 4.915667 CACGAACTAGACTTTCACATCGAA 59.084 41.667 0.00 0.00 33.61 3.71
723 731 4.214758 TCACGAACTAGACTTTCACATCGA 59.785 41.667 0.00 0.00 33.61 3.59
724 732 4.473199 TCACGAACTAGACTTTCACATCG 58.527 43.478 0.00 0.00 35.36 3.84
742 750 1.301423 TTCTTGGGACCGTTTTCACG 58.699 50.000 0.00 0.00 46.71 4.35
746 754 1.681264 CTGCTTTCTTGGGACCGTTTT 59.319 47.619 0.00 0.00 0.00 2.43
749 757 1.600916 GCTGCTTTCTTGGGACCGT 60.601 57.895 0.00 0.00 0.00 4.83
898 906 2.060980 GGATCTGGGTCGCTGGAGT 61.061 63.158 0.00 0.00 0.00 3.85
900 908 2.764128 GGGATCTGGGTCGCTGGA 60.764 66.667 0.00 0.00 0.00 3.86
946 954 0.538287 AGGCAGCTCTGGTTTTCACC 60.538 55.000 0.00 0.00 44.56 4.02
1153 1161 1.402896 GGATCTGGAGGTCGATGCCA 61.403 60.000 0.00 0.00 0.00 4.92
1194 1202 2.124693 GCGGAGGAGACAGAGAGGG 61.125 68.421 0.00 0.00 0.00 4.30
1237 1245 0.738975 ATCACGAGCCGATTCGAGAA 59.261 50.000 7.83 0.00 41.97 2.87
1242 1253 1.661821 CCCGATCACGAGCCGATTC 60.662 63.158 1.50 0.00 42.66 2.52
1364 1375 2.095263 CACCCAATTGGCAGTAGAAACG 60.095 50.000 19.75 3.79 37.83 3.60
1398 1409 4.705110 TCCACATTTTCAGTCTCTTCCA 57.295 40.909 0.00 0.00 0.00 3.53
1455 1466 1.070134 CTGACAGGTCCAAGTTTCGGA 59.930 52.381 0.00 0.00 0.00 4.55
1488 1499 1.425428 GTACATGCTGCGAGCCAAC 59.575 57.895 0.00 0.00 41.51 3.77
1603 1615 2.264005 ACACGGATTGTTAGGCAACA 57.736 45.000 0.00 0.00 42.93 3.33
1700 1712 8.431910 AAAAGATAACCTACTAGACTCCAACA 57.568 34.615 0.00 0.00 0.00 3.33
1748 1760 4.759516 TCCGAAGCCATTAAAACTTCAC 57.240 40.909 12.96 0.00 39.82 3.18
1749 1761 4.022676 GGTTCCGAAGCCATTAAAACTTCA 60.023 41.667 12.96 0.00 39.82 3.02
1981 1993 1.369091 CCGGCAGCACCTTGACATAC 61.369 60.000 0.00 0.00 35.61 2.39
2087 2099 6.654161 GGATGACAGGAATTCTATGATGGAAG 59.346 42.308 15.27 0.00 0.00 3.46
2088 2100 6.331042 AGGATGACAGGAATTCTATGATGGAA 59.669 38.462 15.27 0.00 0.00 3.53
2089 2101 5.848369 AGGATGACAGGAATTCTATGATGGA 59.152 40.000 15.27 0.00 0.00 3.41
2246 2259 1.269051 GCCAGTTCTTTTCAACCGGTG 60.269 52.381 8.52 2.16 0.00 4.94
2247 2260 1.029681 GCCAGTTCTTTTCAACCGGT 58.970 50.000 0.00 0.00 0.00 5.28
2248 2261 1.318576 AGCCAGTTCTTTTCAACCGG 58.681 50.000 0.00 0.00 0.00 5.28
2249 2262 2.357637 TCAAGCCAGTTCTTTTCAACCG 59.642 45.455 0.00 0.00 0.00 4.44
2250 2263 4.385358 TTCAAGCCAGTTCTTTTCAACC 57.615 40.909 0.00 0.00 0.00 3.77
2251 2264 6.978080 TGTAATTCAAGCCAGTTCTTTTCAAC 59.022 34.615 0.00 0.00 0.00 3.18
2391 2805 2.080693 TCCGTGAAATCCGTTGATTGG 58.919 47.619 0.00 0.00 40.34 3.16
2646 3060 8.061920 TCCACCCATCTCAACCTAGATATATAG 58.938 40.741 0.00 0.00 34.40 1.31
2660 3075 1.490490 GCCTTACATCCACCCATCTCA 59.510 52.381 0.00 0.00 0.00 3.27
2789 3204 5.363939 CAGTTCTCCTCAATCTCAATACCC 58.636 45.833 0.00 0.00 0.00 3.69
2834 3249 2.276732 TTGGCTTCTCTGTTGGAAGG 57.723 50.000 0.00 0.00 40.13 3.46
2922 3337 8.965819 ACAAATGGCATGATATAAGTAACAACA 58.034 29.630 0.00 0.00 0.00 3.33
3026 3444 7.196331 GGACCTGAAATTAAGACACATATTGC 58.804 38.462 0.00 0.00 0.00 3.56
3033 3451 3.071479 TGCGGACCTGAAATTAAGACAC 58.929 45.455 0.00 0.00 0.00 3.67
3121 3539 5.107722 GCAAAGCAGCAACTTCAATTTCTAC 60.108 40.000 0.00 0.00 0.00 2.59
3124 3542 3.059393 GGCAAAGCAGCAACTTCAATTTC 60.059 43.478 0.00 0.00 35.83 2.17
3170 3588 8.414629 AGAAATCTAAGTCTGCCAAAAGAATT 57.585 30.769 0.00 0.00 38.06 2.17
3321 3760 6.488006 ACTCTCGTACTTGGAGTTACTAAACA 59.512 38.462 6.47 0.00 37.04 2.83
3323 3762 6.072286 CCACTCTCGTACTTGGAGTTACTAAA 60.072 42.308 8.74 0.00 38.12 1.85
3329 3768 2.872732 TCCACTCTCGTACTTGGAGTT 58.127 47.619 8.74 0.00 38.12 3.01
3332 3771 4.884668 AAAATCCACTCTCGTACTTGGA 57.115 40.909 0.00 0.00 42.34 3.53
3333 3772 4.154195 CCAAAAATCCACTCTCGTACTTGG 59.846 45.833 0.00 0.00 0.00 3.61
3334 3773 4.994852 TCCAAAAATCCACTCTCGTACTTG 59.005 41.667 0.00 0.00 0.00 3.16
3335 3774 5.223449 TCCAAAAATCCACTCTCGTACTT 57.777 39.130 0.00 0.00 0.00 2.24
3336 3775 4.884668 TCCAAAAATCCACTCTCGTACT 57.115 40.909 0.00 0.00 0.00 2.73
3338 3777 4.320870 GGTTCCAAAAATCCACTCTCGTA 58.679 43.478 0.00 0.00 0.00 3.43
3339 3778 3.146847 GGTTCCAAAAATCCACTCTCGT 58.853 45.455 0.00 0.00 0.00 4.18
3340 3779 2.488153 GGGTTCCAAAAATCCACTCTCG 59.512 50.000 0.00 0.00 0.00 4.04
3342 3781 2.514803 CGGGTTCCAAAAATCCACTCT 58.485 47.619 0.00 0.00 0.00 3.24
3343 3782 1.544246 CCGGGTTCCAAAAATCCACTC 59.456 52.381 0.00 0.00 0.00 3.51
3344 3783 1.627864 CCGGGTTCCAAAAATCCACT 58.372 50.000 0.00 0.00 0.00 4.00
3345 3784 0.606096 CCCGGGTTCCAAAAATCCAC 59.394 55.000 14.18 0.00 0.00 4.02
3346 3785 0.188834 ACCCGGGTTCCAAAAATCCA 59.811 50.000 24.16 0.00 0.00 3.41
3347 3786 0.606096 CACCCGGGTTCCAAAAATCC 59.394 55.000 27.83 0.00 0.00 3.01
3348 3787 1.334160 ACACCCGGGTTCCAAAAATC 58.666 50.000 27.83 0.00 0.00 2.17
3349 3788 2.679429 TACACCCGGGTTCCAAAAAT 57.321 45.000 27.83 4.50 0.00 1.82
3350 3789 2.628657 CAATACACCCGGGTTCCAAAAA 59.371 45.455 27.83 4.44 0.00 1.94
3351 3790 2.240279 CAATACACCCGGGTTCCAAAA 58.760 47.619 27.83 6.05 0.00 2.44
3352 3791 1.548128 CCAATACACCCGGGTTCCAAA 60.548 52.381 27.83 8.10 0.00 3.28
3353 3792 0.038455 CCAATACACCCGGGTTCCAA 59.962 55.000 27.83 10.20 0.00 3.53
3354 3793 0.841158 TCCAATACACCCGGGTTCCA 60.841 55.000 27.83 12.77 0.00 3.53
3355 3794 0.107361 CTCCAATACACCCGGGTTCC 60.107 60.000 27.83 0.00 0.00 3.62
3356 3795 0.107361 CCTCCAATACACCCGGGTTC 60.107 60.000 27.83 0.00 0.00 3.62
3357 3796 0.548197 TCCTCCAATACACCCGGGTT 60.548 55.000 27.83 18.22 0.00 4.11
3358 3797 1.081462 TCCTCCAATACACCCGGGT 59.919 57.895 24.16 24.16 0.00 5.28
3359 3798 1.525442 GTCCTCCAATACACCCGGG 59.475 63.158 22.25 22.25 0.00 5.73
3360 3799 0.981277 AGGTCCTCCAATACACCCGG 60.981 60.000 0.00 0.00 35.89 5.73
3361 3800 0.909623 AAGGTCCTCCAATACACCCG 59.090 55.000 0.00 0.00 35.89 5.28
3362 3801 4.790718 AATAAGGTCCTCCAATACACCC 57.209 45.455 0.00 0.00 35.89 4.61
3363 3802 8.584063 TTTAAAATAAGGTCCTCCAATACACC 57.416 34.615 0.00 0.00 35.89 4.16
3390 3829 9.883142 TGAAACCTTAAATGTGATTTTCAAAGT 57.117 25.926 0.00 0.00 33.82 2.66
3460 3899 6.768381 TCATCACCAAACTTTACACATGTGTA 59.232 34.615 30.31 30.31 44.42 2.90
3461 3900 5.592282 TCATCACCAAACTTTACACATGTGT 59.408 36.000 32.47 32.47 46.87 3.72
3462 3901 6.070897 TCATCACCAAACTTTACACATGTG 57.929 37.500 24.25 24.25 0.00 3.21
3463 3902 6.707440 TTCATCACCAAACTTTACACATGT 57.293 33.333 0.00 0.00 0.00 3.21
3464 3903 9.689976 TTATTTCATCACCAAACTTTACACATG 57.310 29.630 0.00 0.00 0.00 3.21
3465 3904 9.912634 CTTATTTCATCACCAAACTTTACACAT 57.087 29.630 0.00 0.00 0.00 3.21
3466 3905 8.908903 ACTTATTTCATCACCAAACTTTACACA 58.091 29.630 0.00 0.00 0.00 3.72
3478 3917 9.463443 GGTTGCATATTTACTTATTTCATCACC 57.537 33.333 0.00 0.00 0.00 4.02
3490 3929 9.638239 CATTTTTGTGTAGGTTGCATATTTACT 57.362 29.630 0.00 0.00 0.00 2.24
3491 3930 9.632807 TCATTTTTGTGTAGGTTGCATATTTAC 57.367 29.630 0.00 0.00 0.00 2.01
3492 3931 9.632807 GTCATTTTTGTGTAGGTTGCATATTTA 57.367 29.630 0.00 0.00 0.00 1.40
3493 3932 8.147058 TGTCATTTTTGTGTAGGTTGCATATTT 58.853 29.630 0.00 0.00 0.00 1.40
3494 3933 7.665690 TGTCATTTTTGTGTAGGTTGCATATT 58.334 30.769 0.00 0.00 0.00 1.28
3495 3934 7.225784 TGTCATTTTTGTGTAGGTTGCATAT 57.774 32.000 0.00 0.00 0.00 1.78
3496 3935 6.641169 TGTCATTTTTGTGTAGGTTGCATA 57.359 33.333 0.00 0.00 0.00 3.14
3497 3936 5.528043 TGTCATTTTTGTGTAGGTTGCAT 57.472 34.783 0.00 0.00 0.00 3.96
3498 3937 4.991153 TGTCATTTTTGTGTAGGTTGCA 57.009 36.364 0.00 0.00 0.00 4.08
3499 3938 6.654793 TTTTGTCATTTTTGTGTAGGTTGC 57.345 33.333 0.00 0.00 0.00 4.17
3500 3939 7.279758 ACCATTTTGTCATTTTTGTGTAGGTTG 59.720 33.333 0.00 0.00 0.00 3.77
3501 3940 7.279758 CACCATTTTGTCATTTTTGTGTAGGTT 59.720 33.333 0.00 0.00 0.00 3.50
3502 3941 6.760770 CACCATTTTGTCATTTTTGTGTAGGT 59.239 34.615 0.00 0.00 0.00 3.08
3503 3942 6.983307 TCACCATTTTGTCATTTTTGTGTAGG 59.017 34.615 0.00 0.00 0.00 3.18
3504 3943 8.592105 ATCACCATTTTGTCATTTTTGTGTAG 57.408 30.769 0.00 0.00 0.00 2.74
3505 3944 8.954950 AATCACCATTTTGTCATTTTTGTGTA 57.045 26.923 0.00 0.00 0.00 2.90
3506 3945 7.862512 AATCACCATTTTGTCATTTTTGTGT 57.137 28.000 0.00 0.00 0.00 3.72
3507 3946 7.856894 GGAAATCACCATTTTGTCATTTTTGTG 59.143 33.333 0.00 0.00 31.94 3.33
3508 3947 7.555554 TGGAAATCACCATTTTGTCATTTTTGT 59.444 29.630 0.00 0.00 34.77 2.83
3509 3948 7.928103 TGGAAATCACCATTTTGTCATTTTTG 58.072 30.769 0.00 0.00 34.77 2.44
3510 3949 8.517062 TTGGAAATCACCATTTTGTCATTTTT 57.483 26.923 0.00 0.00 39.82 1.94
3511 3950 8.517062 TTTGGAAATCACCATTTTGTCATTTT 57.483 26.923 0.00 0.00 39.82 1.82
3512 3951 8.694581 ATTTGGAAATCACCATTTTGTCATTT 57.305 26.923 0.00 0.00 39.82 2.32
3513 3952 9.439500 CTATTTGGAAATCACCATTTTGTCATT 57.561 29.630 0.00 0.00 39.82 2.57
3514 3953 8.596293 ACTATTTGGAAATCACCATTTTGTCAT 58.404 29.630 0.00 0.00 39.82 3.06
3515 3954 7.871973 CACTATTTGGAAATCACCATTTTGTCA 59.128 33.333 0.00 0.00 39.82 3.58
3516 3955 8.087750 TCACTATTTGGAAATCACCATTTTGTC 58.912 33.333 0.00 0.00 39.82 3.18
3517 3956 7.961351 TCACTATTTGGAAATCACCATTTTGT 58.039 30.769 0.00 0.00 39.82 2.83
3518 3957 8.830201 TTCACTATTTGGAAATCACCATTTTG 57.170 30.769 0.00 0.00 39.82 2.44
3523 3962 8.250332 GCTTTATTCACTATTTGGAAATCACCA 58.750 33.333 0.00 0.00 38.24 4.17
3524 3963 8.250332 TGCTTTATTCACTATTTGGAAATCACC 58.750 33.333 0.00 0.00 0.00 4.02
3525 3964 9.807649 ATGCTTTATTCACTATTTGGAAATCAC 57.192 29.630 0.00 0.00 0.00 3.06
3526 3965 9.806203 CATGCTTTATTCACTATTTGGAAATCA 57.194 29.630 0.00 0.00 0.00 2.57
3527 3966 8.758715 GCATGCTTTATTCACTATTTGGAAATC 58.241 33.333 11.37 0.00 0.00 2.17
3528 3967 8.259411 TGCATGCTTTATTCACTATTTGGAAAT 58.741 29.630 20.33 0.00 0.00 2.17
3529 3968 7.545265 GTGCATGCTTTATTCACTATTTGGAAA 59.455 33.333 20.33 0.00 31.32 3.13
3530 3969 7.035004 GTGCATGCTTTATTCACTATTTGGAA 58.965 34.615 20.33 0.00 31.32 3.53
3531 3970 6.377996 AGTGCATGCTTTATTCACTATTTGGA 59.622 34.615 20.33 0.00 40.72 3.53
3532 3971 6.474427 CAGTGCATGCTTTATTCACTATTTGG 59.526 38.462 20.33 0.00 40.58 3.28
3533 3972 7.031372 ACAGTGCATGCTTTATTCACTATTTG 58.969 34.615 20.33 3.69 40.58 2.32
3534 3973 7.161773 ACAGTGCATGCTTTATTCACTATTT 57.838 32.000 20.33 0.00 40.58 1.40
3535 3974 6.764308 ACAGTGCATGCTTTATTCACTATT 57.236 33.333 20.33 0.00 40.58 1.73
3536 3975 6.375174 TGAACAGTGCATGCTTTATTCACTAT 59.625 34.615 20.33 0.00 40.58 2.12
3537 3976 5.704978 TGAACAGTGCATGCTTTATTCACTA 59.295 36.000 20.33 0.34 40.58 2.74
3538 3977 4.520111 TGAACAGTGCATGCTTTATTCACT 59.480 37.500 20.33 9.05 42.80 3.41
3539 3978 4.797471 TGAACAGTGCATGCTTTATTCAC 58.203 39.130 20.33 6.61 33.75 3.18
3540 3979 5.416639 AGATGAACAGTGCATGCTTTATTCA 59.583 36.000 20.33 21.20 0.00 2.57
3541 3980 5.888105 AGATGAACAGTGCATGCTTTATTC 58.112 37.500 20.33 16.72 0.00 1.75
3542 3981 5.909621 AGATGAACAGTGCATGCTTTATT 57.090 34.783 20.33 8.34 0.00 1.40
3543 3982 5.909621 AAGATGAACAGTGCATGCTTTAT 57.090 34.783 20.33 6.81 0.00 1.40
3544 3983 5.335897 GGAAAGATGAACAGTGCATGCTTTA 60.336 40.000 20.33 1.53 30.58 1.85
3545 3984 4.553323 GAAAGATGAACAGTGCATGCTTT 58.447 39.130 20.33 14.29 31.80 3.51
3546 3985 3.057033 GGAAAGATGAACAGTGCATGCTT 60.057 43.478 20.33 4.16 0.00 3.91
3547 3986 2.490903 GGAAAGATGAACAGTGCATGCT 59.509 45.455 20.33 0.00 0.00 3.79
3548 3987 2.229543 TGGAAAGATGAACAGTGCATGC 59.770 45.455 11.82 11.82 0.00 4.06
3549 3988 4.508461 TTGGAAAGATGAACAGTGCATG 57.492 40.909 0.00 0.00 0.00 4.06
3550 3989 5.534207 TTTTGGAAAGATGAACAGTGCAT 57.466 34.783 0.00 0.00 0.00 3.96
3551 3990 4.998671 TTTTGGAAAGATGAACAGTGCA 57.001 36.364 0.00 0.00 0.00 4.57
3552 3991 5.403466 GTGATTTTGGAAAGATGAACAGTGC 59.597 40.000 0.00 0.00 0.00 4.40
3553 3992 5.626543 CGTGATTTTGGAAAGATGAACAGTG 59.373 40.000 0.00 0.00 0.00 3.66
3554 3993 5.530915 TCGTGATTTTGGAAAGATGAACAGT 59.469 36.000 0.00 0.00 0.00 3.55
3555 3994 6.000891 TCGTGATTTTGGAAAGATGAACAG 57.999 37.500 0.00 0.00 0.00 3.16
3556 3995 6.573664 ATCGTGATTTTGGAAAGATGAACA 57.426 33.333 0.00 0.00 0.00 3.18
3557 3996 7.873739 AAATCGTGATTTTGGAAAGATGAAC 57.126 32.000 2.04 0.00 37.74 3.18
3570 4009 8.195617 ACACAAAAATGACAAAATCGTGATTT 57.804 26.923 2.04 2.04 42.35 2.17
3571 4010 7.769272 ACACAAAAATGACAAAATCGTGATT 57.231 28.000 0.00 0.00 0.00 2.57
3572 4011 8.751335 GTTACACAAAAATGACAAAATCGTGAT 58.249 29.630 0.00 0.00 0.00 3.06
3573 4012 7.971168 AGTTACACAAAAATGACAAAATCGTGA 59.029 29.630 0.00 0.00 0.00 4.35
3574 4013 8.114359 AGTTACACAAAAATGACAAAATCGTG 57.886 30.769 0.00 0.00 0.00 4.35
3575 4014 7.165154 CGAGTTACACAAAAATGACAAAATCGT 59.835 33.333 0.00 0.00 30.82 3.73
3576 4015 7.481965 CGAGTTACACAAAAATGACAAAATCG 58.518 34.615 0.00 0.00 0.00 3.34
3577 4016 7.043722 TGCGAGTTACACAAAAATGACAAAATC 60.044 33.333 0.00 0.00 0.00 2.17
3578 4017 6.754209 TGCGAGTTACACAAAAATGACAAAAT 59.246 30.769 0.00 0.00 0.00 1.82
3579 4018 6.093404 TGCGAGTTACACAAAAATGACAAAA 58.907 32.000 0.00 0.00 0.00 2.44
3580 4019 5.641709 TGCGAGTTACACAAAAATGACAAA 58.358 33.333 0.00 0.00 0.00 2.83
3581 4020 5.236655 TGCGAGTTACACAAAAATGACAA 57.763 34.783 0.00 0.00 0.00 3.18
3582 4021 4.884458 TGCGAGTTACACAAAAATGACA 57.116 36.364 0.00 0.00 0.00 3.58
3583 4022 4.616802 CCATGCGAGTTACACAAAAATGAC 59.383 41.667 0.00 0.00 0.00 3.06
3584 4023 4.277174 ACCATGCGAGTTACACAAAAATGA 59.723 37.500 0.00 0.00 0.00 2.57
3585 4024 4.545610 ACCATGCGAGTTACACAAAAATG 58.454 39.130 0.00 0.00 0.00 2.32
3586 4025 4.846779 ACCATGCGAGTTACACAAAAAT 57.153 36.364 0.00 0.00 0.00 1.82
3587 4026 4.640789 AACCATGCGAGTTACACAAAAA 57.359 36.364 0.00 0.00 0.00 1.94
3588 4027 5.098218 GTAACCATGCGAGTTACACAAAA 57.902 39.130 14.80 0.00 45.74 2.44
3589 4028 4.735662 GTAACCATGCGAGTTACACAAA 57.264 40.909 14.80 0.00 45.74 2.83
3594 4033 7.298507 TGAAATAAGTAACCATGCGAGTTAC 57.701 36.000 12.83 12.83 46.45 2.50
3595 4034 6.036735 GCTGAAATAAGTAACCATGCGAGTTA 59.963 38.462 0.00 0.00 0.00 2.24
3596 4035 5.163754 GCTGAAATAAGTAACCATGCGAGTT 60.164 40.000 0.00 0.00 0.00 3.01
3597 4036 4.332819 GCTGAAATAAGTAACCATGCGAGT 59.667 41.667 0.00 0.00 0.00 4.18
3598 4037 4.332543 TGCTGAAATAAGTAACCATGCGAG 59.667 41.667 0.00 0.00 0.00 5.03
3599 4038 4.257731 TGCTGAAATAAGTAACCATGCGA 58.742 39.130 0.00 0.00 0.00 5.10
3600 4039 4.614555 TGCTGAAATAAGTAACCATGCG 57.385 40.909 0.00 0.00 0.00 4.73
3601 4040 6.135290 TGATGCTGAAATAAGTAACCATGC 57.865 37.500 0.00 0.00 0.00 4.06
3602 4041 8.246180 AGTTTGATGCTGAAATAAGTAACCATG 58.754 33.333 0.00 0.00 0.00 3.66
3603 4042 8.353423 AGTTTGATGCTGAAATAAGTAACCAT 57.647 30.769 0.00 0.00 0.00 3.55
3604 4043 7.759489 AGTTTGATGCTGAAATAAGTAACCA 57.241 32.000 0.00 0.00 0.00 3.67
3605 4044 8.915654 CAAAGTTTGATGCTGAAATAAGTAACC 58.084 33.333 10.19 0.00 0.00 2.85
3606 4045 8.427774 GCAAAGTTTGATGCTGAAATAAGTAAC 58.572 33.333 19.82 0.00 39.46 2.50
3607 4046 8.140628 TGCAAAGTTTGATGCTGAAATAAGTAA 58.859 29.630 19.82 0.00 42.97 2.24
3608 4047 7.594758 GTGCAAAGTTTGATGCTGAAATAAGTA 59.405 33.333 19.82 0.00 42.97 2.24
3609 4048 6.421801 GTGCAAAGTTTGATGCTGAAATAAGT 59.578 34.615 19.82 0.00 42.97 2.24
3610 4049 6.421501 TGTGCAAAGTTTGATGCTGAAATAAG 59.578 34.615 19.82 0.00 42.97 1.73
3611 4050 6.279123 TGTGCAAAGTTTGATGCTGAAATAA 58.721 32.000 19.82 0.00 42.97 1.40
3612 4051 5.840715 TGTGCAAAGTTTGATGCTGAAATA 58.159 33.333 19.82 0.00 42.97 1.40
3613 4052 4.695396 TGTGCAAAGTTTGATGCTGAAAT 58.305 34.783 19.82 0.00 42.97 2.17
3614 4053 4.120792 TGTGCAAAGTTTGATGCTGAAA 57.879 36.364 19.82 0.00 42.97 2.69
3615 4054 3.797451 TGTGCAAAGTTTGATGCTGAA 57.203 38.095 19.82 0.00 42.97 3.02
3616 4055 3.068448 ACATGTGCAAAGTTTGATGCTGA 59.932 39.130 19.82 0.00 42.97 4.26
3617 4056 3.183574 CACATGTGCAAAGTTTGATGCTG 59.816 43.478 19.82 12.15 42.97 4.41
3618 4057 3.181473 ACACATGTGCAAAGTTTGATGCT 60.181 39.130 25.68 0.00 42.97 3.79
3619 4058 3.125316 ACACATGTGCAAAGTTTGATGC 58.875 40.909 25.68 5.40 42.86 3.91
3620 4059 8.692110 ATATTACACATGTGCAAAGTTTGATG 57.308 30.769 25.68 15.28 0.00 3.07
3622 4061 9.225436 TCTATATTACACATGTGCAAAGTTTGA 57.775 29.630 25.68 12.09 0.00 2.69
3626 4065 9.394767 TGAATCTATATTACACATGTGCAAAGT 57.605 29.630 25.68 13.76 0.00 2.66
3683 4122 8.555361 GCCAAAATGCTATTTTGAAGTTTTACA 58.445 29.630 23.97 0.00 40.73 2.41
3684 4123 8.555361 TGCCAAAATGCTATTTTGAAGTTTTAC 58.445 29.630 23.97 10.99 40.73 2.01
3685 4124 8.555361 GTGCCAAAATGCTATTTTGAAGTTTTA 58.445 29.630 23.97 8.77 40.73 1.52
3686 4125 7.066766 TGTGCCAAAATGCTATTTTGAAGTTTT 59.933 29.630 23.97 0.00 40.73 2.43
3687 4126 6.541641 TGTGCCAAAATGCTATTTTGAAGTTT 59.458 30.769 23.97 0.00 40.73 2.66
3688 4127 6.054295 TGTGCCAAAATGCTATTTTGAAGTT 58.946 32.000 23.97 0.00 40.73 2.66
3689 4128 5.609423 TGTGCCAAAATGCTATTTTGAAGT 58.391 33.333 23.97 0.00 40.73 3.01
3690 4129 5.697633 ACTGTGCCAAAATGCTATTTTGAAG 59.302 36.000 23.97 18.87 40.73 3.02
3691 4130 5.609423 ACTGTGCCAAAATGCTATTTTGAA 58.391 33.333 23.97 14.82 40.73 2.69
3692 4131 5.212532 ACTGTGCCAAAATGCTATTTTGA 57.787 34.783 23.97 11.08 40.73 2.69
3693 4132 5.466058 TGAACTGTGCCAAAATGCTATTTTG 59.534 36.000 19.15 19.15 38.68 2.44
3694 4133 5.609423 TGAACTGTGCCAAAATGCTATTTT 58.391 33.333 0.00 0.00 0.00 1.82
3695 4134 5.212532 TGAACTGTGCCAAAATGCTATTT 57.787 34.783 0.00 0.00 0.00 1.40
3696 4135 4.870123 TGAACTGTGCCAAAATGCTATT 57.130 36.364 0.00 0.00 0.00 1.73
3697 4136 4.870123 TTGAACTGTGCCAAAATGCTAT 57.130 36.364 0.00 0.00 0.00 2.97
3698 4137 4.662468 TTTGAACTGTGCCAAAATGCTA 57.338 36.364 6.26 0.00 30.29 3.49
3699 4138 3.540314 TTTGAACTGTGCCAAAATGCT 57.460 38.095 6.26 0.00 30.29 3.79
3700 4139 4.612932 TTTTTGAACTGTGCCAAAATGC 57.387 36.364 16.64 0.00 40.55 3.56
3718 4157 2.501316 GGTGCATTGGAGCCCTATTTTT 59.499 45.455 0.00 0.00 0.00 1.94
3719 4158 2.110578 GGTGCATTGGAGCCCTATTTT 58.889 47.619 0.00 0.00 0.00 1.82
3720 4159 1.288932 AGGTGCATTGGAGCCCTATTT 59.711 47.619 3.58 0.00 34.69 1.40
3721 4160 0.929244 AGGTGCATTGGAGCCCTATT 59.071 50.000 3.58 0.00 34.69 1.73
3722 4161 0.184451 CAGGTGCATTGGAGCCCTAT 59.816 55.000 3.58 0.00 34.69 2.57
3723 4162 1.609239 CAGGTGCATTGGAGCCCTA 59.391 57.895 3.58 0.00 34.69 3.53
3724 4163 2.357836 CAGGTGCATTGGAGCCCT 59.642 61.111 3.58 0.00 36.16 5.19
3725 4164 2.757099 CCAGGTGCATTGGAGCCC 60.757 66.667 13.40 0.00 37.96 5.19
3726 4165 2.757099 CCCAGGTGCATTGGAGCC 60.757 66.667 18.76 1.31 37.96 4.70
3727 4166 1.598701 GAACCCAGGTGCATTGGAGC 61.599 60.000 18.76 0.00 37.96 4.70
3728 4167 0.967380 GGAACCCAGGTGCATTGGAG 60.967 60.000 18.76 12.25 37.96 3.86
3729 4168 1.076549 GGAACCCAGGTGCATTGGA 59.923 57.895 18.76 0.00 37.96 3.53
3730 4169 0.831288 TTGGAACCCAGGTGCATTGG 60.831 55.000 12.06 12.06 33.81 3.16
3731 4170 1.001181 CTTTGGAACCCAGGTGCATTG 59.999 52.381 0.00 0.00 33.81 2.82
3732 4171 1.341080 CTTTGGAACCCAGGTGCATT 58.659 50.000 0.00 0.00 33.81 3.56
3733 4172 0.188342 ACTTTGGAACCCAGGTGCAT 59.812 50.000 0.00 0.00 33.81 3.96
3734 4173 0.754957 CACTTTGGAACCCAGGTGCA 60.755 55.000 0.00 0.00 34.46 4.57
3735 4174 0.467290 TCACTTTGGAACCCAGGTGC 60.467 55.000 12.78 0.00 38.21 5.01
3736 4175 1.133792 AGTCACTTTGGAACCCAGGTG 60.134 52.381 11.92 11.92 38.98 4.00
3737 4176 1.222567 AGTCACTTTGGAACCCAGGT 58.777 50.000 0.00 0.00 33.81 4.00
3738 4177 2.364972 AAGTCACTTTGGAACCCAGG 57.635 50.000 0.00 0.00 33.81 4.45
3739 4178 4.432712 CAAAAAGTCACTTTGGAACCCAG 58.567 43.478 2.78 0.00 33.64 4.45
3740 4179 3.368948 GCAAAAAGTCACTTTGGAACCCA 60.369 43.478 2.78 0.00 33.64 4.51
3741 4180 3.194861 GCAAAAAGTCACTTTGGAACCC 58.805 45.455 2.78 0.00 33.64 4.11
3742 4181 3.194861 GGCAAAAAGTCACTTTGGAACC 58.805 45.455 2.78 0.00 33.64 3.62
3743 4182 3.194861 GGGCAAAAAGTCACTTTGGAAC 58.805 45.455 2.78 0.00 33.64 3.62
3744 4183 2.169561 GGGGCAAAAAGTCACTTTGGAA 59.830 45.455 2.78 0.00 33.64 3.53
3745 4184 1.760029 GGGGCAAAAAGTCACTTTGGA 59.240 47.619 2.78 0.00 33.64 3.53
3746 4185 1.484240 TGGGGCAAAAAGTCACTTTGG 59.516 47.619 2.78 0.57 33.64 3.28
3747 4186 2.977772 TGGGGCAAAAAGTCACTTTG 57.022 45.000 2.78 0.00 33.64 2.77
3748 4187 2.837591 ACTTGGGGCAAAAAGTCACTTT 59.162 40.909 0.00 0.00 34.94 2.66
3749 4188 2.466846 ACTTGGGGCAAAAAGTCACTT 58.533 42.857 0.00 0.00 30.87 3.16
3750 4189 2.159179 ACTTGGGGCAAAAAGTCACT 57.841 45.000 0.00 0.00 30.87 3.41
3751 4190 2.956333 AGTACTTGGGGCAAAAAGTCAC 59.044 45.455 0.00 1.84 37.74 3.67
3752 4191 3.306472 AGTACTTGGGGCAAAAAGTCA 57.694 42.857 0.00 0.00 37.74 3.41
3753 4192 5.977489 ATAAGTACTTGGGGCAAAAAGTC 57.023 39.130 18.56 0.00 37.74 3.01
3754 4193 6.740944 AAATAAGTACTTGGGGCAAAAAGT 57.259 33.333 18.56 4.47 39.82 2.66
3755 4194 9.366216 GATAAAATAAGTACTTGGGGCAAAAAG 57.634 33.333 18.56 0.00 0.00 2.27
3756 4195 9.095700 AGATAAAATAAGTACTTGGGGCAAAAA 57.904 29.630 18.56 0.00 0.00 1.94
3757 4196 8.658840 AGATAAAATAAGTACTTGGGGCAAAA 57.341 30.769 18.56 0.00 0.00 2.44
3758 4197 8.113462 AGAGATAAAATAAGTACTTGGGGCAAA 58.887 33.333 18.56 0.00 0.00 3.68
3759 4198 7.556275 CAGAGATAAAATAAGTACTTGGGGCAA 59.444 37.037 18.56 0.00 0.00 4.52
3760 4199 7.054124 CAGAGATAAAATAAGTACTTGGGGCA 58.946 38.462 18.56 0.00 0.00 5.36
3761 4200 7.054751 ACAGAGATAAAATAAGTACTTGGGGC 58.945 38.462 18.56 1.60 0.00 5.80
3810 4250 5.263872 TGTCACCCCACCTGTAAAATAAT 57.736 39.130 0.00 0.00 0.00 1.28
3812 4252 4.938575 ATGTCACCCCACCTGTAAAATA 57.061 40.909 0.00 0.00 0.00 1.40
3813 4253 3.825908 ATGTCACCCCACCTGTAAAAT 57.174 42.857 0.00 0.00 0.00 1.82
3814 4254 3.117474 TCAATGTCACCCCACCTGTAAAA 60.117 43.478 0.00 0.00 0.00 1.52
3938 4394 6.603599 GGAGGGGGTAATCATTTATATGAAGC 59.396 42.308 0.00 0.00 43.67 3.86
4079 4542 9.557061 CCGAATGAATATCATTAGATCCATCAT 57.443 33.333 12.78 0.00 46.20 2.45
4155 4618 2.979814 AGTTTTGTCCCAAGCCAAAC 57.020 45.000 0.00 0.00 30.74 2.93
4172 4637 9.874205 CCATTTCAAAATACATTGGACATTAGT 57.126 29.630 0.00 0.00 0.00 2.24
4175 4640 8.042515 CCTCCATTTCAAAATACATTGGACATT 58.957 33.333 0.00 0.00 0.00 2.71
4180 4645 8.066612 ACTACCTCCATTTCAAAATACATTGG 57.933 34.615 0.00 0.00 0.00 3.16
4215 4680 8.608185 AATCCCATGTTAATCCAAATACAACT 57.392 30.769 0.00 0.00 0.00 3.16
4218 4683 8.837099 AAGAATCCCATGTTAATCCAAATACA 57.163 30.769 0.00 0.00 0.00 2.29
4513 4992 0.965866 TGGGAGCTCCACTGTACTCG 60.966 60.000 33.29 0.00 41.46 4.18
4643 5122 2.992593 TGGCACACTACACAGTTTCAA 58.007 42.857 0.00 0.00 30.46 2.69
4689 5168 0.182299 CCCCTCCAATGAGAAGAGCC 59.818 60.000 0.00 0.00 41.42 4.70
4827 5306 2.041081 TGGGTGAGGGTTTCAATGTAGG 59.959 50.000 0.00 0.00 37.61 3.18
5085 5565 5.243730 TCCCAGATCAAGTTTGAAATGGAAC 59.756 40.000 21.22 0.00 43.82 3.62
5140 5620 4.141298 TGGGAATGGCCAAACAATTTCTTT 60.141 37.500 10.96 0.00 38.95 2.52
5167 5647 3.599730 AAATCAGCTCGTCTGTCATGA 57.400 42.857 0.00 0.00 43.32 3.07
5260 5740 0.036105 TCATGCTTCAGCCATGACGT 60.036 50.000 0.00 0.00 41.18 4.34
5299 5779 6.071616 ACAAAATGGACACAACTGTAAACACT 60.072 34.615 0.00 0.00 0.00 3.55
5364 5844 3.497262 ACAAAACCGATCTTTCTCCGTTC 59.503 43.478 0.00 0.00 0.00 3.95
5464 5968 0.324738 TCTGGAGAAGCTGGGTCGAT 60.325 55.000 0.00 0.00 0.00 3.59
5472 5976 2.234908 ACGCTGTAAATCTGGAGAAGCT 59.765 45.455 0.00 0.00 0.00 3.74
5514 6018 0.178068 GCCGCTCCATCAGGAAGTTA 59.822 55.000 0.00 0.00 45.19 2.24
5524 6028 2.512286 CATCACACGCCGCTCCAT 60.512 61.111 0.00 0.00 0.00 3.41
5534 6038 1.135257 CAGTCCGGAGAGACATCACAC 60.135 57.143 3.06 0.00 39.34 3.82
5638 6142 7.754924 CGTACAATCAAACATTTTAAGGCATCT 59.245 33.333 0.00 0.00 0.00 2.90
5641 6145 5.631512 GCGTACAATCAAACATTTTAAGGCA 59.368 36.000 0.00 0.00 0.00 4.75
5642 6146 5.219951 CGCGTACAATCAAACATTTTAAGGC 60.220 40.000 0.00 0.00 0.00 4.35
5643 6147 6.081049 TCGCGTACAATCAAACATTTTAAGG 58.919 36.000 5.77 0.00 0.00 2.69
5700 6204 9.233649 TCTTAAGTTGTCTTTTAAGTTTGACCA 57.766 29.630 1.63 0.00 37.84 4.02
5751 6255 0.745845 CTGCAGAGGATCCCAAACCG 60.746 60.000 8.42 0.00 33.66 4.44
5798 6385 4.000988 GAGTGTCAATGTTACCAACCGAT 58.999 43.478 0.00 0.00 0.00 4.18
5834 6421 5.057149 AGTATCTCCGACATTTTGTATGCC 58.943 41.667 0.00 0.00 0.00 4.40
5960 6610 6.387041 AGCAACCAGAAACTAAACCTTAAC 57.613 37.500 0.00 0.00 0.00 2.01
6035 6686 4.219115 TGGACTCACTTTTGCCCATTTTA 58.781 39.130 0.00 0.00 0.00 1.52
6039 6690 1.963515 GTTGGACTCACTTTTGCCCAT 59.036 47.619 0.00 0.00 0.00 4.00
6081 6732 5.352569 GCATTGTAGATTCTCATAATCCCGG 59.647 44.000 0.00 0.00 0.00 5.73
6082 6733 5.352569 GGCATTGTAGATTCTCATAATCCCG 59.647 44.000 0.00 0.00 0.00 5.14
6121 6774 1.340017 TGCCAAGCATCCCTAACACTC 60.340 52.381 0.00 0.00 31.71 3.51
6132 6785 1.377725 CGGTCTCCTTGCCAAGCAT 60.378 57.895 0.00 0.00 38.76 3.79
6148 6801 3.280938 TTCCACATGAAGGCCCCGG 62.281 63.158 0.00 0.00 0.00 5.73
6160 6813 2.257207 CCACTCTCCCTTACTTCCACA 58.743 52.381 0.00 0.00 0.00 4.17
6168 6821 4.556697 TCTTCATATGCCACTCTCCCTTA 58.443 43.478 0.00 0.00 0.00 2.69
6205 6858 4.894784 ACGTGAGTGTATTCATTGACCTT 58.105 39.130 0.00 0.00 46.97 3.50
6268 6921 5.700722 AAATTTTCTTACGTCCCCACTTC 57.299 39.130 0.00 0.00 0.00 3.01
6300 6953 5.506649 CCACACAATTACCCAACACACTAAC 60.507 44.000 0.00 0.00 0.00 2.34
6303 6956 2.955660 CCACACAATTACCCAACACACT 59.044 45.455 0.00 0.00 0.00 3.55
6386 7043 9.631257 AACATTTGTTGATGACCATAGATCATA 57.369 29.630 0.00 0.00 36.92 2.15
6390 7047 8.036575 CCAAAACATTTGTTGATGACCATAGAT 58.963 33.333 9.73 0.00 38.44 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.