Multiple sequence alignment - TraesCS5A01G084300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G084300 chr5A 100.000 2357 0 0 1 2357 109969054 109966698 0.000000e+00 4353.0
1 TraesCS5A01G084300 chr5A 86.000 100 14 0 2127 2226 631330500 631330401 8.910000e-20 108.0
2 TraesCS5A01G084300 chr5B 95.003 1601 53 15 768 2357 115420645 115419061 0.000000e+00 2488.0
3 TraesCS5A01G084300 chr5B 87.000 100 13 0 2127 2226 626338335 626338236 1.910000e-21 113.0
4 TraesCS5A01G084300 chr5B 87.000 100 13 0 2127 2226 631464757 631464658 1.910000e-21 113.0
5 TraesCS5A01G084300 chr5D 92.059 1083 46 16 458 1523 106518538 106519597 0.000000e+00 1487.0
6 TraesCS5A01G084300 chr5D 97.730 749 12 2 1614 2357 106519650 106520398 0.000000e+00 1284.0
7 TraesCS5A01G084300 chr5D 85.042 361 38 4 1 358 106510795 106511142 1.040000e-93 353.0
8 TraesCS5A01G084300 chr5D 86.000 100 14 0 2127 2226 502596582 502596483 8.910000e-20 108.0
9 TraesCS5A01G084300 chr5D 84.694 98 13 2 2127 2223 11949949 11950045 1.930000e-16 97.1
10 TraesCS5A01G084300 chr7D 91.266 229 19 1 992 1219 86827818 86827590 6.330000e-81 311.0
11 TraesCS5A01G084300 chr2D 90.830 229 20 1 992 1219 203135639 203135411 2.940000e-79 305.0
12 TraesCS5A01G084300 chr3B 89.655 232 23 1 989 1219 615471715 615471946 6.370000e-76 294.0
13 TraesCS5A01G084300 chr4B 88.362 232 26 1 989 1219 445051469 445051700 6.420000e-71 278.0
14 TraesCS5A01G084300 chr2B 86.190 210 13 8 1000 1209 77262415 77262608 1.830000e-51 213.0
15 TraesCS5A01G084300 chr4D 88.043 92 6 4 2128 2217 84545695 84545783 1.150000e-18 104.0
16 TraesCS5A01G084300 chr3D 82.456 114 16 4 2106 2216 48365616 48365728 1.930000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G084300 chr5A 109966698 109969054 2356 True 4353.0 4353 100.0000 1 2357 1 chr5A.!!$R1 2356
1 TraesCS5A01G084300 chr5B 115419061 115420645 1584 True 2488.0 2488 95.0030 768 2357 1 chr5B.!!$R1 1589
2 TraesCS5A01G084300 chr5D 106518538 106520398 1860 False 1385.5 1487 94.8945 458 2357 2 chr5D.!!$F3 1899

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
193 194 0.036765 CATGCATTGCCTTGCCTTGT 60.037 50.0 6.12 0.0 42.06 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1540 1561 0.248215 GTGCGCATTTCCTTGATCCG 60.248 55.0 15.91 0.0 0.0 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.483954 CTGCCCCATCGACTTTGAT 57.516 52.632 0.00 0.00 0.00 2.57
19 20 1.303309 CTGCCCCATCGACTTTGATC 58.697 55.000 0.00 0.00 0.00 2.92
20 21 0.911769 TGCCCCATCGACTTTGATCT 59.088 50.000 0.00 0.00 0.00 2.75
21 22 1.281867 TGCCCCATCGACTTTGATCTT 59.718 47.619 0.00 0.00 0.00 2.40
22 23 2.290896 TGCCCCATCGACTTTGATCTTT 60.291 45.455 0.00 0.00 0.00 2.52
23 24 2.098117 GCCCCATCGACTTTGATCTTTG 59.902 50.000 0.00 0.00 0.00 2.77
24 25 3.347216 CCCCATCGACTTTGATCTTTGT 58.653 45.455 0.00 0.00 0.00 2.83
25 26 3.758554 CCCCATCGACTTTGATCTTTGTT 59.241 43.478 0.00 0.00 0.00 2.83
26 27 4.379813 CCCCATCGACTTTGATCTTTGTTG 60.380 45.833 0.00 0.00 0.00 3.33
27 28 4.216257 CCCATCGACTTTGATCTTTGTTGT 59.784 41.667 0.00 0.00 0.00 3.32
28 29 5.411361 CCCATCGACTTTGATCTTTGTTGTA 59.589 40.000 0.00 0.00 0.00 2.41
29 30 6.307155 CCATCGACTTTGATCTTTGTTGTAC 58.693 40.000 0.00 0.00 0.00 2.90
30 31 5.917541 TCGACTTTGATCTTTGTTGTACC 57.082 39.130 0.00 0.00 0.00 3.34
31 32 4.446385 TCGACTTTGATCTTTGTTGTACCG 59.554 41.667 0.00 0.00 0.00 4.02
32 33 4.446385 CGACTTTGATCTTTGTTGTACCGA 59.554 41.667 0.00 0.00 0.00 4.69
33 34 5.120208 CGACTTTGATCTTTGTTGTACCGAT 59.880 40.000 0.00 0.00 0.00 4.18
34 35 6.347402 CGACTTTGATCTTTGTTGTACCGATT 60.347 38.462 0.00 0.00 0.00 3.34
35 36 6.668323 ACTTTGATCTTTGTTGTACCGATTG 58.332 36.000 0.00 0.00 0.00 2.67
36 37 5.621197 TTGATCTTTGTTGTACCGATTGG 57.379 39.130 0.00 0.00 42.84 3.16
48 49 2.418368 CCGATTGGTGGAGAAATCCA 57.582 50.000 0.00 0.00 37.46 3.41
49 50 2.936202 CCGATTGGTGGAGAAATCCAT 58.064 47.619 0.00 0.00 42.41 3.41
50 51 2.880890 CCGATTGGTGGAGAAATCCATC 59.119 50.000 0.00 0.00 42.41 3.51
51 52 3.434167 CCGATTGGTGGAGAAATCCATCT 60.434 47.826 8.89 0.00 41.38 2.90
52 53 4.202441 CGATTGGTGGAGAAATCCATCTT 58.798 43.478 8.89 0.00 41.38 2.40
53 54 5.368145 CGATTGGTGGAGAAATCCATCTTA 58.632 41.667 8.89 0.00 41.38 2.10
54 55 6.000219 CGATTGGTGGAGAAATCCATCTTAT 59.000 40.000 8.89 2.99 41.38 1.73
55 56 7.161404 CGATTGGTGGAGAAATCCATCTTATA 58.839 38.462 8.89 0.00 41.38 0.98
56 57 7.118390 CGATTGGTGGAGAAATCCATCTTATAC 59.882 40.741 8.89 0.00 41.38 1.47
57 58 7.451731 TTGGTGGAGAAATCCATCTTATACT 57.548 36.000 8.89 0.00 41.38 2.12
58 59 6.830912 TGGTGGAGAAATCCATCTTATACTG 58.169 40.000 8.89 0.00 41.38 2.74
59 60 6.386927 TGGTGGAGAAATCCATCTTATACTGT 59.613 38.462 8.89 0.00 41.38 3.55
60 61 6.708054 GGTGGAGAAATCCATCTTATACTGTG 59.292 42.308 0.00 0.00 42.41 3.66
61 62 7.275920 GTGGAGAAATCCATCTTATACTGTGT 58.724 38.462 0.00 0.00 42.41 3.72
62 63 7.439655 GTGGAGAAATCCATCTTATACTGTGTC 59.560 40.741 0.00 0.00 42.41 3.67
63 64 6.642950 GGAGAAATCCATCTTATACTGTGTCG 59.357 42.308 0.00 0.00 0.00 4.35
64 65 5.986135 AGAAATCCATCTTATACTGTGTCGC 59.014 40.000 0.00 0.00 0.00 5.19
65 66 4.937201 ATCCATCTTATACTGTGTCGCA 57.063 40.909 0.00 0.00 0.00 5.10
66 67 4.937201 TCCATCTTATACTGTGTCGCAT 57.063 40.909 0.00 0.00 0.00 4.73
67 68 4.620982 TCCATCTTATACTGTGTCGCATG 58.379 43.478 0.00 0.00 0.00 4.06
68 69 4.340950 TCCATCTTATACTGTGTCGCATGA 59.659 41.667 0.00 0.00 0.00 3.07
69 70 4.445718 CCATCTTATACTGTGTCGCATGAC 59.554 45.833 0.00 0.00 45.71 3.06
70 71 4.041740 TCTTATACTGTGTCGCATGACC 57.958 45.455 0.00 0.00 44.86 4.02
71 72 2.485266 TATACTGTGTCGCATGACCG 57.515 50.000 0.00 0.00 44.86 4.79
72 73 0.815095 ATACTGTGTCGCATGACCGA 59.185 50.000 0.00 0.00 44.86 4.69
78 79 2.885113 TCGCATGACCGACTGAGG 59.115 61.111 0.00 0.00 31.36 3.86
79 80 1.677633 TCGCATGACCGACTGAGGA 60.678 57.895 0.00 0.00 34.73 3.71
80 81 1.037579 TCGCATGACCGACTGAGGAT 61.038 55.000 0.00 0.00 34.73 3.24
81 82 0.179100 CGCATGACCGACTGAGGATT 60.179 55.000 0.00 0.00 34.73 3.01
82 83 1.740380 CGCATGACCGACTGAGGATTT 60.740 52.381 0.00 0.00 34.73 2.17
83 84 2.359900 GCATGACCGACTGAGGATTTT 58.640 47.619 0.00 0.00 34.73 1.82
84 85 3.531538 GCATGACCGACTGAGGATTTTA 58.468 45.455 0.00 0.00 34.73 1.52
85 86 3.557595 GCATGACCGACTGAGGATTTTAG 59.442 47.826 0.00 0.00 34.73 1.85
86 87 4.759782 CATGACCGACTGAGGATTTTAGT 58.240 43.478 0.00 0.00 34.73 2.24
87 88 4.188247 TGACCGACTGAGGATTTTAGTG 57.812 45.455 1.40 0.00 34.73 2.74
88 89 3.830178 TGACCGACTGAGGATTTTAGTGA 59.170 43.478 1.40 0.00 34.73 3.41
89 90 4.082190 TGACCGACTGAGGATTTTAGTGAG 60.082 45.833 1.40 0.00 34.73 3.51
90 91 4.087182 ACCGACTGAGGATTTTAGTGAGA 58.913 43.478 1.40 0.00 34.73 3.27
91 92 4.082136 ACCGACTGAGGATTTTAGTGAGAC 60.082 45.833 1.40 0.00 34.73 3.36
92 93 4.158764 CCGACTGAGGATTTTAGTGAGACT 59.841 45.833 0.00 0.00 0.00 3.24
93 94 5.336744 CGACTGAGGATTTTAGTGAGACTC 58.663 45.833 0.00 0.00 0.00 3.36
94 95 5.124776 CGACTGAGGATTTTAGTGAGACTCT 59.875 44.000 3.68 0.00 0.00 3.24
95 96 6.349777 CGACTGAGGATTTTAGTGAGACTCTT 60.350 42.308 3.68 0.00 0.00 2.85
96 97 7.309770 ACTGAGGATTTTAGTGAGACTCTTT 57.690 36.000 3.68 0.00 0.00 2.52
97 98 7.740805 ACTGAGGATTTTAGTGAGACTCTTTT 58.259 34.615 3.68 0.00 0.00 2.27
98 99 7.659390 ACTGAGGATTTTAGTGAGACTCTTTTG 59.341 37.037 3.68 0.00 0.00 2.44
99 100 6.936900 TGAGGATTTTAGTGAGACTCTTTTGG 59.063 38.462 3.68 0.00 0.00 3.28
100 101 5.707764 AGGATTTTAGTGAGACTCTTTTGGC 59.292 40.000 3.68 0.00 0.00 4.52
101 102 5.707764 GGATTTTAGTGAGACTCTTTTGGCT 59.292 40.000 3.68 0.00 0.00 4.75
102 103 6.207614 GGATTTTAGTGAGACTCTTTTGGCTT 59.792 38.462 3.68 0.00 0.00 4.35
103 104 7.390718 GGATTTTAGTGAGACTCTTTTGGCTTA 59.609 37.037 3.68 0.00 0.00 3.09
104 105 7.492352 TTTTAGTGAGACTCTTTTGGCTTAC 57.508 36.000 3.68 0.00 0.00 2.34
105 106 4.689612 AGTGAGACTCTTTTGGCTTACA 57.310 40.909 3.68 0.00 0.00 2.41
106 107 4.381411 AGTGAGACTCTTTTGGCTTACAC 58.619 43.478 3.68 0.00 0.00 2.90
107 108 4.101741 AGTGAGACTCTTTTGGCTTACACT 59.898 41.667 3.68 0.00 0.00 3.55
108 109 4.449405 GTGAGACTCTTTTGGCTTACACTC 59.551 45.833 3.68 0.00 0.00 3.51
109 110 3.997681 GAGACTCTTTTGGCTTACACTCC 59.002 47.826 0.00 0.00 0.00 3.85
110 111 3.648545 AGACTCTTTTGGCTTACACTCCT 59.351 43.478 0.00 0.00 0.00 3.69
111 112 3.997681 GACTCTTTTGGCTTACACTCCTC 59.002 47.826 0.00 0.00 0.00 3.71
112 113 2.996621 CTCTTTTGGCTTACACTCCTCG 59.003 50.000 0.00 0.00 0.00 4.63
113 114 2.631062 TCTTTTGGCTTACACTCCTCGA 59.369 45.455 0.00 0.00 0.00 4.04
114 115 2.743636 TTTGGCTTACACTCCTCGAG 57.256 50.000 5.13 5.13 35.52 4.04
115 116 0.246635 TTGGCTTACACTCCTCGAGC 59.753 55.000 6.99 0.00 32.04 5.03
116 117 0.612174 TGGCTTACACTCCTCGAGCT 60.612 55.000 6.99 0.00 32.04 4.09
117 118 0.101579 GGCTTACACTCCTCGAGCTC 59.898 60.000 6.99 2.73 32.04 4.09
118 119 1.099689 GCTTACACTCCTCGAGCTCT 58.900 55.000 12.85 0.00 32.04 4.09
119 120 1.474879 GCTTACACTCCTCGAGCTCTT 59.525 52.381 12.85 0.00 32.04 2.85
120 121 2.094442 GCTTACACTCCTCGAGCTCTTT 60.094 50.000 12.85 0.00 32.04 2.52
121 122 3.765026 CTTACACTCCTCGAGCTCTTTC 58.235 50.000 12.85 0.00 32.04 2.62
122 123 1.621992 ACACTCCTCGAGCTCTTTCA 58.378 50.000 12.85 0.00 32.04 2.69
123 124 2.175202 ACACTCCTCGAGCTCTTTCAT 58.825 47.619 12.85 0.00 32.04 2.57
124 125 3.357203 ACACTCCTCGAGCTCTTTCATA 58.643 45.455 12.85 0.00 32.04 2.15
125 126 3.957497 ACACTCCTCGAGCTCTTTCATAT 59.043 43.478 12.85 0.00 32.04 1.78
126 127 5.133941 ACACTCCTCGAGCTCTTTCATATA 58.866 41.667 12.85 0.00 32.04 0.86
127 128 5.009210 ACACTCCTCGAGCTCTTTCATATAC 59.991 44.000 12.85 0.00 32.04 1.47
128 129 4.521256 ACTCCTCGAGCTCTTTCATATACC 59.479 45.833 12.85 0.00 32.04 2.73
129 130 4.730966 TCCTCGAGCTCTTTCATATACCT 58.269 43.478 12.85 0.00 0.00 3.08
130 131 4.762765 TCCTCGAGCTCTTTCATATACCTC 59.237 45.833 12.85 0.00 0.00 3.85
131 132 4.520874 CCTCGAGCTCTTTCATATACCTCA 59.479 45.833 12.85 0.00 0.00 3.86
132 133 5.184864 CCTCGAGCTCTTTCATATACCTCAT 59.815 44.000 12.85 0.00 0.00 2.90
133 134 6.018589 TCGAGCTCTTTCATATACCTCATG 57.981 41.667 12.85 0.00 0.00 3.07
134 135 5.770162 TCGAGCTCTTTCATATACCTCATGA 59.230 40.000 12.85 0.00 0.00 3.07
135 136 6.072230 TCGAGCTCTTTCATATACCTCATGAG 60.072 42.308 16.24 16.24 34.07 2.90
136 137 6.072230 CGAGCTCTTTCATATACCTCATGAGA 60.072 42.308 24.62 5.34 34.07 3.27
137 138 7.522889 CGAGCTCTTTCATATACCTCATGAGAA 60.523 40.741 24.62 11.97 34.07 2.87
138 139 8.027524 AGCTCTTTCATATACCTCATGAGAAA 57.972 34.615 24.62 13.05 34.07 2.52
139 140 8.489489 AGCTCTTTCATATACCTCATGAGAAAA 58.511 33.333 24.62 9.04 34.07 2.29
140 141 9.282569 GCTCTTTCATATACCTCATGAGAAAAT 57.717 33.333 24.62 15.22 34.07 1.82
145 146 9.511272 TTCATATACCTCATGAGAAAATGATGG 57.489 33.333 24.62 7.29 36.03 3.51
146 147 8.105197 TCATATACCTCATGAGAAAATGATGGG 58.895 37.037 24.62 6.53 36.03 4.00
147 148 4.598036 ACCTCATGAGAAAATGATGGGT 57.402 40.909 24.62 7.20 36.03 4.51
148 149 5.715439 ACCTCATGAGAAAATGATGGGTA 57.285 39.130 24.62 0.00 34.82 3.69
149 150 5.688807 ACCTCATGAGAAAATGATGGGTAG 58.311 41.667 24.62 4.41 34.82 3.18
150 151 5.429762 ACCTCATGAGAAAATGATGGGTAGA 59.570 40.000 24.62 0.00 34.82 2.59
151 152 6.069440 ACCTCATGAGAAAATGATGGGTAGAA 60.069 38.462 24.62 0.00 34.82 2.10
152 153 6.485984 CCTCATGAGAAAATGATGGGTAGAAG 59.514 42.308 24.62 0.00 36.03 2.85
153 154 5.824624 TCATGAGAAAATGATGGGTAGAAGC 59.175 40.000 0.00 0.00 31.58 3.86
154 155 4.526970 TGAGAAAATGATGGGTAGAAGCC 58.473 43.478 0.00 0.00 36.00 4.35
155 156 3.545703 AGAAAATGATGGGTAGAAGCCG 58.454 45.455 0.00 0.00 38.98 5.52
156 157 2.348411 AAATGATGGGTAGAAGCCGG 57.652 50.000 0.00 0.00 38.98 6.13
157 158 0.474184 AATGATGGGTAGAAGCCGGG 59.526 55.000 2.18 0.00 38.98 5.73
158 159 2.056906 ATGATGGGTAGAAGCCGGGC 62.057 60.000 12.11 12.11 38.98 6.13
159 160 2.366972 ATGGGTAGAAGCCGGGCT 60.367 61.111 17.69 17.69 42.56 5.19
168 169 4.081050 AGCCGGGCTTTGAAAGAC 57.919 55.556 17.69 5.49 33.89 3.01
169 170 1.150536 AGCCGGGCTTTGAAAGACA 59.849 52.632 17.69 0.00 38.70 3.41
170 171 0.251341 AGCCGGGCTTTGAAAGACAT 60.251 50.000 17.69 0.00 38.70 3.06
171 172 0.603065 GCCGGGCTTTGAAAGACATT 59.397 50.000 13.53 0.00 38.70 2.71
172 173 1.000843 GCCGGGCTTTGAAAGACATTT 59.999 47.619 13.53 0.00 38.70 2.32
173 174 2.547855 GCCGGGCTTTGAAAGACATTTT 60.548 45.455 13.53 0.00 38.70 1.82
174 175 3.317150 CCGGGCTTTGAAAGACATTTTC 58.683 45.455 13.53 0.00 38.70 2.29
175 176 3.243704 CCGGGCTTTGAAAGACATTTTCA 60.244 43.478 13.53 0.00 38.70 2.69
176 177 4.559153 CGGGCTTTGAAAGACATTTTCAT 58.441 39.130 13.53 0.00 38.70 2.57
177 178 4.386652 CGGGCTTTGAAAGACATTTTCATG 59.613 41.667 13.53 0.00 38.70 3.07
178 179 4.152938 GGGCTTTGAAAGACATTTTCATGC 59.847 41.667 13.53 14.23 38.70 4.06
179 180 4.751098 GGCTTTGAAAGACATTTTCATGCA 59.249 37.500 9.48 0.00 38.62 3.96
180 181 5.410439 GGCTTTGAAAGACATTTTCATGCAT 59.590 36.000 9.48 0.00 38.62 3.96
181 182 6.072893 GGCTTTGAAAGACATTTTCATGCATT 60.073 34.615 9.48 0.00 38.62 3.56
182 183 6.795114 GCTTTGAAAGACATTTTCATGCATTG 59.205 34.615 9.48 0.00 38.12 2.82
183 184 5.849357 TGAAAGACATTTTCATGCATTGC 57.151 34.783 0.00 0.46 33.90 3.56
184 185 4.691685 TGAAAGACATTTTCATGCATTGCC 59.308 37.500 6.12 0.00 33.90 4.52
185 186 4.546829 AAGACATTTTCATGCATTGCCT 57.453 36.364 6.12 0.00 33.05 4.75
186 187 4.546829 AGACATTTTCATGCATTGCCTT 57.453 36.364 6.12 0.00 33.05 4.35
187 188 4.250464 AGACATTTTCATGCATTGCCTTG 58.750 39.130 6.12 4.33 33.05 3.61
188 189 2.745281 ACATTTTCATGCATTGCCTTGC 59.255 40.909 6.12 1.22 43.07 4.01
189 190 1.810959 TTTTCATGCATTGCCTTGCC 58.189 45.000 6.12 0.00 42.06 4.52
190 191 0.978151 TTTCATGCATTGCCTTGCCT 59.022 45.000 6.12 0.00 42.06 4.75
191 192 0.978151 TTCATGCATTGCCTTGCCTT 59.022 45.000 6.12 0.00 42.06 4.35
192 193 0.248012 TCATGCATTGCCTTGCCTTG 59.752 50.000 6.12 4.23 42.06 3.61
193 194 0.036765 CATGCATTGCCTTGCCTTGT 60.037 50.000 6.12 0.00 42.06 3.16
194 195 0.036765 ATGCATTGCCTTGCCTTGTG 60.037 50.000 6.12 0.00 42.06 3.33
195 196 2.030958 GCATTGCCTTGCCTTGTGC 61.031 57.895 0.00 0.00 36.60 4.57
196 197 1.735198 CATTGCCTTGCCTTGTGCG 60.735 57.895 0.00 0.00 45.60 5.34
197 198 2.202395 ATTGCCTTGCCTTGTGCGT 61.202 52.632 0.00 0.00 45.60 5.24
198 199 2.424705 ATTGCCTTGCCTTGTGCGTG 62.425 55.000 0.00 0.00 45.60 5.34
199 200 3.595758 GCCTTGCCTTGTGCGTGT 61.596 61.111 0.00 0.00 45.60 4.49
200 201 2.639286 CCTTGCCTTGTGCGTGTC 59.361 61.111 0.00 0.00 45.60 3.67
201 202 2.186160 CCTTGCCTTGTGCGTGTCA 61.186 57.895 0.00 0.00 45.60 3.58
202 203 1.518056 CCTTGCCTTGTGCGTGTCAT 61.518 55.000 0.00 0.00 45.60 3.06
203 204 1.155889 CTTGCCTTGTGCGTGTCATA 58.844 50.000 0.00 0.00 45.60 2.15
204 205 1.739466 CTTGCCTTGTGCGTGTCATAT 59.261 47.619 0.00 0.00 45.60 1.78
205 206 1.819928 TGCCTTGTGCGTGTCATATT 58.180 45.000 0.00 0.00 45.60 1.28
206 207 1.468127 TGCCTTGTGCGTGTCATATTG 59.532 47.619 0.00 0.00 45.60 1.90
207 208 1.795162 GCCTTGTGCGTGTCATATTGC 60.795 52.381 0.00 0.00 0.00 3.56
208 209 1.739466 CCTTGTGCGTGTCATATTGCT 59.261 47.619 0.00 0.00 0.00 3.91
209 210 2.223112 CCTTGTGCGTGTCATATTGCTC 60.223 50.000 0.00 0.00 0.00 4.26
210 211 2.091852 TGTGCGTGTCATATTGCTCA 57.908 45.000 0.00 0.00 0.00 4.26
211 212 2.631267 TGTGCGTGTCATATTGCTCAT 58.369 42.857 0.00 0.00 0.00 2.90
212 213 3.791245 TGTGCGTGTCATATTGCTCATA 58.209 40.909 0.00 0.00 0.00 2.15
213 214 3.803778 TGTGCGTGTCATATTGCTCATAG 59.196 43.478 0.00 0.00 0.00 2.23
214 215 3.804325 GTGCGTGTCATATTGCTCATAGT 59.196 43.478 0.00 0.00 0.00 2.12
215 216 3.803778 TGCGTGTCATATTGCTCATAGTG 59.196 43.478 0.00 0.00 0.00 2.74
216 217 3.804325 GCGTGTCATATTGCTCATAGTGT 59.196 43.478 0.00 0.00 0.00 3.55
217 218 4.271049 GCGTGTCATATTGCTCATAGTGTT 59.729 41.667 0.00 0.00 0.00 3.32
218 219 5.462068 GCGTGTCATATTGCTCATAGTGTTA 59.538 40.000 0.00 0.00 0.00 2.41
219 220 6.562270 GCGTGTCATATTGCTCATAGTGTTAC 60.562 42.308 0.00 0.00 0.00 2.50
220 221 6.074302 CGTGTCATATTGCTCATAGTGTTACC 60.074 42.308 0.00 0.00 0.00 2.85
221 222 6.761242 GTGTCATATTGCTCATAGTGTTACCA 59.239 38.462 0.00 0.00 0.00 3.25
222 223 6.986231 TGTCATATTGCTCATAGTGTTACCAG 59.014 38.462 0.00 0.00 0.00 4.00
223 224 5.991606 TCATATTGCTCATAGTGTTACCAGC 59.008 40.000 0.00 0.00 0.00 4.85
224 225 3.694043 TTGCTCATAGTGTTACCAGCA 57.306 42.857 0.00 0.00 35.11 4.41
225 226 2.972625 TGCTCATAGTGTTACCAGCAC 58.027 47.619 0.00 0.00 32.00 4.40
226 227 2.280628 GCTCATAGTGTTACCAGCACC 58.719 52.381 0.00 0.00 37.56 5.01
227 228 2.540515 CTCATAGTGTTACCAGCACCG 58.459 52.381 0.00 0.00 37.56 4.94
228 229 1.897133 TCATAGTGTTACCAGCACCGT 59.103 47.619 0.00 0.00 37.56 4.83
229 230 2.300723 TCATAGTGTTACCAGCACCGTT 59.699 45.455 0.00 0.00 37.56 4.44
230 231 3.510753 TCATAGTGTTACCAGCACCGTTA 59.489 43.478 0.00 0.00 37.56 3.18
231 232 2.159327 AGTGTTACCAGCACCGTTAC 57.841 50.000 0.00 0.00 37.56 2.50
232 233 1.413445 AGTGTTACCAGCACCGTTACA 59.587 47.619 0.00 0.00 37.56 2.41
233 234 2.158928 AGTGTTACCAGCACCGTTACAA 60.159 45.455 0.00 0.00 37.56 2.41
234 235 2.613133 GTGTTACCAGCACCGTTACAAA 59.387 45.455 0.00 0.00 0.00 2.83
235 236 2.873472 TGTTACCAGCACCGTTACAAAG 59.127 45.455 0.00 0.00 0.00 2.77
236 237 2.874086 GTTACCAGCACCGTTACAAAGT 59.126 45.455 0.00 0.00 0.00 2.66
237 238 1.589803 ACCAGCACCGTTACAAAGTC 58.410 50.000 0.00 0.00 0.00 3.01
238 239 1.134340 ACCAGCACCGTTACAAAGTCA 60.134 47.619 0.00 0.00 0.00 3.41
239 240 1.531149 CCAGCACCGTTACAAAGTCAG 59.469 52.381 0.00 0.00 0.00 3.51
240 241 2.479837 CAGCACCGTTACAAAGTCAGA 58.520 47.619 0.00 0.00 0.00 3.27
241 242 2.476619 CAGCACCGTTACAAAGTCAGAG 59.523 50.000 0.00 0.00 0.00 3.35
242 243 2.102588 AGCACCGTTACAAAGTCAGAGT 59.897 45.455 0.00 0.00 0.00 3.24
243 244 2.221055 GCACCGTTACAAAGTCAGAGTG 59.779 50.000 0.00 0.00 0.00 3.51
244 245 2.800544 CACCGTTACAAAGTCAGAGTGG 59.199 50.000 0.00 0.00 0.00 4.00
245 246 2.224209 ACCGTTACAAAGTCAGAGTGGG 60.224 50.000 0.00 0.00 0.00 4.61
246 247 2.413837 CGTTACAAAGTCAGAGTGGGG 58.586 52.381 0.00 0.00 0.00 4.96
247 248 2.779506 GTTACAAAGTCAGAGTGGGGG 58.220 52.381 0.00 0.00 0.00 5.40
248 249 2.370849 GTTACAAAGTCAGAGTGGGGGA 59.629 50.000 0.00 0.00 0.00 4.81
249 250 1.518367 ACAAAGTCAGAGTGGGGGAA 58.482 50.000 0.00 0.00 0.00 3.97
250 251 1.143073 ACAAAGTCAGAGTGGGGGAAC 59.857 52.381 0.00 0.00 0.00 3.62
251 252 0.396811 AAAGTCAGAGTGGGGGAACG 59.603 55.000 0.00 0.00 0.00 3.95
252 253 0.471211 AAGTCAGAGTGGGGGAACGA 60.471 55.000 0.00 0.00 0.00 3.85
253 254 0.900647 AGTCAGAGTGGGGGAACGAG 60.901 60.000 0.00 0.00 0.00 4.18
254 255 1.155390 TCAGAGTGGGGGAACGAGT 59.845 57.895 0.00 0.00 0.00 4.18
255 256 0.471211 TCAGAGTGGGGGAACGAGTT 60.471 55.000 0.00 0.00 0.00 3.01
256 257 0.037232 CAGAGTGGGGGAACGAGTTC 60.037 60.000 7.40 7.40 38.80 3.01
257 258 0.471211 AGAGTGGGGGAACGAGTTCA 60.471 55.000 16.56 0.00 41.20 3.18
258 259 0.613777 GAGTGGGGGAACGAGTTCAT 59.386 55.000 16.56 0.00 41.20 2.57
259 260 0.324943 AGTGGGGGAACGAGTTCATG 59.675 55.000 16.56 0.00 41.20 3.07
260 261 0.323629 GTGGGGGAACGAGTTCATGA 59.676 55.000 16.56 0.00 41.20 3.07
261 262 0.613260 TGGGGGAACGAGTTCATGAG 59.387 55.000 16.56 0.00 41.20 2.90
262 263 0.107654 GGGGGAACGAGTTCATGAGG 60.108 60.000 16.56 0.00 41.20 3.86
263 264 0.744771 GGGGAACGAGTTCATGAGGC 60.745 60.000 16.56 0.00 41.20 4.70
264 265 0.250513 GGGAACGAGTTCATGAGGCT 59.749 55.000 16.56 0.00 41.20 4.58
265 266 1.363744 GGAACGAGTTCATGAGGCTG 58.636 55.000 16.56 0.00 41.20 4.85
266 267 1.066858 GGAACGAGTTCATGAGGCTGA 60.067 52.381 16.56 0.00 41.20 4.26
267 268 2.612972 GGAACGAGTTCATGAGGCTGAA 60.613 50.000 16.56 0.00 41.20 3.02
268 269 2.376808 ACGAGTTCATGAGGCTGAAG 57.623 50.000 6.60 0.00 35.88 3.02
269 270 1.895798 ACGAGTTCATGAGGCTGAAGA 59.104 47.619 6.60 0.00 35.88 2.87
270 271 2.499289 ACGAGTTCATGAGGCTGAAGAT 59.501 45.455 6.60 0.00 35.88 2.40
271 272 2.864946 CGAGTTCATGAGGCTGAAGATG 59.135 50.000 6.60 0.00 35.88 2.90
272 273 3.429960 CGAGTTCATGAGGCTGAAGATGA 60.430 47.826 6.60 0.00 35.88 2.92
273 274 4.511527 GAGTTCATGAGGCTGAAGATGAA 58.488 43.478 6.60 0.00 35.88 2.57
274 275 5.113446 AGTTCATGAGGCTGAAGATGAAT 57.887 39.130 0.00 0.00 37.22 2.57
275 276 5.124645 AGTTCATGAGGCTGAAGATGAATC 58.875 41.667 0.00 0.00 37.22 2.52
276 277 5.104444 AGTTCATGAGGCTGAAGATGAATCT 60.104 40.000 0.00 0.00 37.22 2.40
278 279 5.752650 TCATGAGGCTGAAGATGAATCTTT 58.247 37.500 6.98 0.00 46.47 2.52
279 280 6.185511 TCATGAGGCTGAAGATGAATCTTTT 58.814 36.000 6.98 0.00 46.47 2.27
280 281 5.892160 TGAGGCTGAAGATGAATCTTTTG 57.108 39.130 6.98 4.89 46.47 2.44
281 282 4.703575 TGAGGCTGAAGATGAATCTTTTGG 59.296 41.667 6.98 2.81 46.47 3.28
282 283 3.446516 AGGCTGAAGATGAATCTTTTGGC 59.553 43.478 17.14 17.14 46.47 4.52
283 284 3.194116 GGCTGAAGATGAATCTTTTGGCA 59.806 43.478 18.64 8.78 46.47 4.92
284 285 4.142004 GGCTGAAGATGAATCTTTTGGCAT 60.142 41.667 18.64 0.00 46.47 4.40
285 286 5.041940 GCTGAAGATGAATCTTTTGGCATC 58.958 41.667 6.98 0.00 46.47 3.91
286 287 5.163540 GCTGAAGATGAATCTTTTGGCATCT 60.164 40.000 6.98 0.00 46.47 2.90
287 288 6.203808 TGAAGATGAATCTTTTGGCATCTG 57.796 37.500 6.98 0.00 46.47 2.90
288 289 5.947566 TGAAGATGAATCTTTTGGCATCTGA 59.052 36.000 6.98 0.00 46.47 3.27
289 290 6.605995 TGAAGATGAATCTTTTGGCATCTGAT 59.394 34.615 6.98 0.00 46.47 2.90
290 291 7.123697 TGAAGATGAATCTTTTGGCATCTGATT 59.876 33.333 6.98 8.42 46.47 2.57
291 292 7.040473 AGATGAATCTTTTGGCATCTGATTC 57.960 36.000 20.21 20.21 44.08 2.52
292 293 6.834451 AGATGAATCTTTTGGCATCTGATTCT 59.166 34.615 23.90 15.76 44.08 2.40
293 294 6.203808 TGAATCTTTTGGCATCTGATTCTG 57.796 37.500 23.90 0.00 41.80 3.02
294 295 5.713389 TGAATCTTTTGGCATCTGATTCTGT 59.287 36.000 23.90 3.57 41.80 3.41
295 296 5.578005 ATCTTTTGGCATCTGATTCTGTG 57.422 39.130 0.00 0.00 0.00 3.66
296 297 4.654915 TCTTTTGGCATCTGATTCTGTGA 58.345 39.130 0.00 0.00 0.00 3.58
297 298 5.258841 TCTTTTGGCATCTGATTCTGTGAT 58.741 37.500 0.00 0.00 0.00 3.06
298 299 4.976224 TTTGGCATCTGATTCTGTGATG 57.024 40.909 0.00 0.00 40.16 3.07
304 305 5.599359 CATCTGATTCTGTGATGCTCATC 57.401 43.478 3.03 3.03 38.29 2.92
305 306 4.748277 TCTGATTCTGTGATGCTCATCA 57.252 40.909 8.37 8.37 44.83 3.07
314 315 3.317603 TGATGCTCATCACAACTTCGA 57.682 42.857 8.37 0.00 42.42 3.71
315 316 2.995939 TGATGCTCATCACAACTTCGAC 59.004 45.455 8.37 0.00 42.42 4.20
316 317 1.795768 TGCTCATCACAACTTCGACC 58.204 50.000 0.00 0.00 0.00 4.79
317 318 1.069978 TGCTCATCACAACTTCGACCA 59.930 47.619 0.00 0.00 0.00 4.02
318 319 2.143122 GCTCATCACAACTTCGACCAA 58.857 47.619 0.00 0.00 0.00 3.67
319 320 2.158449 GCTCATCACAACTTCGACCAAG 59.842 50.000 0.00 0.00 38.21 3.61
321 322 3.390135 TCATCACAACTTCGACCAAGTC 58.610 45.455 0.00 0.00 45.32 3.01
322 323 3.069586 TCATCACAACTTCGACCAAGTCT 59.930 43.478 0.00 0.00 45.32 3.24
323 324 3.536956 TCACAACTTCGACCAAGTCTT 57.463 42.857 0.00 0.00 45.32 3.01
324 325 3.194861 TCACAACTTCGACCAAGTCTTG 58.805 45.455 5.53 5.53 45.32 3.02
334 335 2.646121 CAAGTCTTGGTCTTGGGCC 58.354 57.895 4.52 0.00 38.70 5.80
335 336 0.895559 CAAGTCTTGGTCTTGGGCCC 60.896 60.000 17.59 17.59 38.70 5.80
336 337 1.360393 AAGTCTTGGTCTTGGGCCCA 61.360 55.000 24.45 24.45 0.00 5.36
337 338 1.142688 AGTCTTGGTCTTGGGCCCAT 61.143 55.000 29.23 2.53 0.00 4.00
338 339 0.623723 GTCTTGGTCTTGGGCCCATA 59.376 55.000 29.23 15.09 0.00 2.74
339 340 1.215423 GTCTTGGTCTTGGGCCCATAT 59.785 52.381 29.23 0.00 0.00 1.78
340 341 2.441750 GTCTTGGTCTTGGGCCCATATA 59.558 50.000 29.23 10.51 0.00 0.86
341 342 2.711009 TCTTGGTCTTGGGCCCATATAG 59.289 50.000 29.23 21.15 0.00 1.31
342 343 2.505672 TGGTCTTGGGCCCATATAGA 57.494 50.000 29.23 23.36 0.00 1.98
343 344 3.004126 TGGTCTTGGGCCCATATAGAT 57.996 47.619 29.23 0.00 0.00 1.98
344 345 2.912956 TGGTCTTGGGCCCATATAGATC 59.087 50.000 29.23 25.72 0.00 2.75
345 346 3.185455 GGTCTTGGGCCCATATAGATCT 58.815 50.000 29.23 0.00 0.00 2.75
346 347 3.054802 GGTCTTGGGCCCATATAGATCTG 60.055 52.174 29.23 7.54 0.00 2.90
347 348 3.054802 GTCTTGGGCCCATATAGATCTGG 60.055 52.174 29.23 5.95 0.00 3.86
348 349 2.741159 TGGGCCCATATAGATCTGGT 57.259 50.000 24.45 0.00 0.00 4.00
349 350 2.269023 TGGGCCCATATAGATCTGGTG 58.731 52.381 24.45 1.24 0.00 4.17
350 351 2.158019 TGGGCCCATATAGATCTGGTGA 60.158 50.000 24.45 0.00 0.00 4.02
351 352 2.503356 GGGCCCATATAGATCTGGTGAG 59.497 54.545 19.95 0.00 0.00 3.51
352 353 2.503356 GGCCCATATAGATCTGGTGAGG 59.497 54.545 5.18 2.03 0.00 3.86
353 354 3.177228 GCCCATATAGATCTGGTGAGGT 58.823 50.000 5.18 0.00 0.00 3.85
354 355 3.584848 GCCCATATAGATCTGGTGAGGTT 59.415 47.826 5.18 0.00 0.00 3.50
355 356 4.564406 GCCCATATAGATCTGGTGAGGTTG 60.564 50.000 5.18 0.00 0.00 3.77
356 357 4.564406 CCCATATAGATCTGGTGAGGTTGC 60.564 50.000 5.18 0.00 0.00 4.17
357 358 4.040829 CCATATAGATCTGGTGAGGTTGCA 59.959 45.833 5.18 0.00 0.00 4.08
358 359 5.280368 CCATATAGATCTGGTGAGGTTGCAT 60.280 44.000 5.18 0.00 0.00 3.96
359 360 4.785346 ATAGATCTGGTGAGGTTGCATT 57.215 40.909 5.18 0.00 0.00 3.56
360 361 2.996631 AGATCTGGTGAGGTTGCATTC 58.003 47.619 0.00 0.00 0.00 2.67
361 362 1.667724 GATCTGGTGAGGTTGCATTCG 59.332 52.381 0.00 0.00 0.00 3.34
362 363 0.684535 TCTGGTGAGGTTGCATTCGA 59.315 50.000 0.00 0.00 0.00 3.71
363 364 1.278985 TCTGGTGAGGTTGCATTCGAT 59.721 47.619 0.00 0.00 0.00 3.59
364 365 1.399440 CTGGTGAGGTTGCATTCGATG 59.601 52.381 0.00 0.00 0.00 3.84
365 366 1.003003 TGGTGAGGTTGCATTCGATGA 59.997 47.619 0.00 0.00 0.00 2.92
366 367 2.083774 GGTGAGGTTGCATTCGATGAA 58.916 47.619 0.00 0.00 0.00 2.57
367 368 2.096496 GGTGAGGTTGCATTCGATGAAG 59.904 50.000 0.00 0.00 0.00 3.02
368 369 2.096496 GTGAGGTTGCATTCGATGAAGG 59.904 50.000 0.00 0.00 0.00 3.46
369 370 2.027285 TGAGGTTGCATTCGATGAAGGA 60.027 45.455 0.00 0.00 0.00 3.36
370 371 3.009723 GAGGTTGCATTCGATGAAGGAA 58.990 45.455 0.00 0.00 0.00 3.36
371 372 3.624777 AGGTTGCATTCGATGAAGGAAT 58.375 40.909 0.00 0.00 34.56 3.01
375 376 2.675767 CATTCGATGAAGGAATGCCG 57.324 50.000 2.03 0.00 42.82 5.69
376 377 0.947244 ATTCGATGAAGGAATGCCGC 59.053 50.000 0.00 0.00 39.96 6.53
377 378 1.095228 TTCGATGAAGGAATGCCGCC 61.095 55.000 0.00 0.00 39.96 6.13
378 379 1.819208 CGATGAAGGAATGCCGCCA 60.819 57.895 0.00 0.00 39.96 5.69
379 380 1.168407 CGATGAAGGAATGCCGCCAT 61.168 55.000 0.10 0.10 39.96 4.40
380 381 0.313043 GATGAAGGAATGCCGCCATG 59.687 55.000 4.81 0.00 39.96 3.66
381 382 0.106569 ATGAAGGAATGCCGCCATGA 60.107 50.000 0.00 0.00 39.96 3.07
382 383 1.031571 TGAAGGAATGCCGCCATGAC 61.032 55.000 0.00 0.00 39.96 3.06
383 384 0.749454 GAAGGAATGCCGCCATGACT 60.749 55.000 0.00 0.00 39.96 3.41
384 385 0.749454 AAGGAATGCCGCCATGACTC 60.749 55.000 0.00 0.00 39.96 3.36
385 386 1.451927 GGAATGCCGCCATGACTCA 60.452 57.895 0.00 0.00 0.00 3.41
386 387 1.442526 GGAATGCCGCCATGACTCAG 61.443 60.000 0.00 0.00 0.00 3.35
387 388 0.745845 GAATGCCGCCATGACTCAGT 60.746 55.000 0.00 0.00 0.00 3.41
388 389 1.028330 AATGCCGCCATGACTCAGTG 61.028 55.000 0.00 0.00 0.00 3.66
389 390 2.046892 GCCGCCATGACTCAGTGT 60.047 61.111 0.00 0.00 0.00 3.55
390 391 1.672356 GCCGCCATGACTCAGTGTT 60.672 57.895 0.00 0.00 0.00 3.32
391 392 1.237285 GCCGCCATGACTCAGTGTTT 61.237 55.000 0.00 0.00 0.00 2.83
392 393 0.798776 CCGCCATGACTCAGTGTTTC 59.201 55.000 0.00 0.00 0.00 2.78
393 394 1.511850 CGCCATGACTCAGTGTTTCA 58.488 50.000 0.00 0.00 0.00 2.69
394 395 1.872952 CGCCATGACTCAGTGTTTCAA 59.127 47.619 0.00 0.00 0.00 2.69
395 396 2.349817 CGCCATGACTCAGTGTTTCAAC 60.350 50.000 0.00 0.00 0.00 3.18
396 397 2.618241 GCCATGACTCAGTGTTTCAACA 59.382 45.455 0.00 0.00 36.38 3.33
397 398 3.304257 GCCATGACTCAGTGTTTCAACAG 60.304 47.826 0.00 0.00 40.05 3.16
398 399 4.129380 CCATGACTCAGTGTTTCAACAGA 58.871 43.478 0.00 0.00 40.05 3.41
399 400 4.758674 CCATGACTCAGTGTTTCAACAGAT 59.241 41.667 0.00 0.00 40.05 2.90
400 401 5.106791 CCATGACTCAGTGTTTCAACAGATC 60.107 44.000 0.00 0.00 40.05 2.75
401 402 4.380531 TGACTCAGTGTTTCAACAGATCC 58.619 43.478 0.00 0.00 40.05 3.36
402 403 3.744660 ACTCAGTGTTTCAACAGATCCC 58.255 45.455 0.00 0.00 40.05 3.85
403 404 3.136443 ACTCAGTGTTTCAACAGATCCCA 59.864 43.478 0.00 0.00 40.05 4.37
404 405 3.476552 TCAGTGTTTCAACAGATCCCAC 58.523 45.455 0.00 0.00 40.05 4.61
405 406 3.118075 TCAGTGTTTCAACAGATCCCACA 60.118 43.478 0.00 0.00 40.05 4.17
406 407 3.631686 CAGTGTTTCAACAGATCCCACAA 59.368 43.478 0.00 0.00 40.05 3.33
407 408 3.885297 AGTGTTTCAACAGATCCCACAAG 59.115 43.478 0.00 0.00 40.05 3.16
408 409 3.632145 GTGTTTCAACAGATCCCACAAGT 59.368 43.478 0.00 0.00 40.05 3.16
409 410 4.097892 GTGTTTCAACAGATCCCACAAGTT 59.902 41.667 0.00 0.00 40.05 2.66
410 411 4.097741 TGTTTCAACAGATCCCACAAGTTG 59.902 41.667 0.00 0.00 40.53 3.16
411 412 3.855255 TCAACAGATCCCACAAGTTGA 57.145 42.857 10.54 0.00 44.25 3.18
412 413 4.163441 TCAACAGATCCCACAAGTTGAA 57.837 40.909 10.54 0.00 43.71 2.69
413 414 3.882888 TCAACAGATCCCACAAGTTGAAC 59.117 43.478 10.54 0.00 43.71 3.18
414 415 3.864789 ACAGATCCCACAAGTTGAACT 57.135 42.857 10.54 0.00 0.00 3.01
415 416 3.480470 ACAGATCCCACAAGTTGAACTG 58.520 45.455 10.54 10.84 0.00 3.16
416 417 2.816087 CAGATCCCACAAGTTGAACTGG 59.184 50.000 10.54 6.94 0.00 4.00
417 418 1.541588 GATCCCACAAGTTGAACTGGC 59.458 52.381 10.54 0.00 0.00 4.85
418 419 0.817634 TCCCACAAGTTGAACTGGCG 60.818 55.000 10.54 2.10 0.00 5.69
419 420 1.008538 CCACAAGTTGAACTGGCGC 60.009 57.895 10.54 0.00 0.00 6.53
420 421 1.008538 CACAAGTTGAACTGGCGCC 60.009 57.895 22.73 22.73 0.00 6.53
421 422 1.152963 ACAAGTTGAACTGGCGCCT 60.153 52.632 29.70 7.33 0.00 5.52
422 423 0.107831 ACAAGTTGAACTGGCGCCTA 59.892 50.000 29.70 13.31 0.00 3.93
423 424 1.271379 ACAAGTTGAACTGGCGCCTAT 60.271 47.619 29.70 13.15 0.00 2.57
424 425 2.027561 ACAAGTTGAACTGGCGCCTATA 60.028 45.455 29.70 6.34 0.00 1.31
425 426 3.206150 CAAGTTGAACTGGCGCCTATAT 58.794 45.455 29.70 11.36 0.00 0.86
426 427 2.838736 AGTTGAACTGGCGCCTATATG 58.161 47.619 29.70 14.43 0.00 1.78
427 428 1.873591 GTTGAACTGGCGCCTATATGG 59.126 52.381 29.70 12.59 39.35 2.74
442 443 6.037786 CCTATATGGCGATGGTTAAGAAGA 57.962 41.667 0.00 0.00 0.00 2.87
443 444 6.644347 CCTATATGGCGATGGTTAAGAAGAT 58.356 40.000 0.00 0.00 0.00 2.40
444 445 6.758886 CCTATATGGCGATGGTTAAGAAGATC 59.241 42.308 0.00 0.00 0.00 2.75
445 446 3.904800 TGGCGATGGTTAAGAAGATCA 57.095 42.857 0.00 0.00 0.00 2.92
446 447 3.797039 TGGCGATGGTTAAGAAGATCAG 58.203 45.455 0.00 0.00 0.00 2.90
447 448 3.450817 TGGCGATGGTTAAGAAGATCAGA 59.549 43.478 0.00 0.00 0.00 3.27
448 449 4.081142 TGGCGATGGTTAAGAAGATCAGAA 60.081 41.667 0.00 0.00 0.00 3.02
449 450 4.509600 GGCGATGGTTAAGAAGATCAGAAG 59.490 45.833 0.00 0.00 0.00 2.85
450 451 5.112686 GCGATGGTTAAGAAGATCAGAAGT 58.887 41.667 0.00 0.00 0.00 3.01
451 452 5.233263 GCGATGGTTAAGAAGATCAGAAGTC 59.767 44.000 0.00 0.00 0.00 3.01
452 453 5.457148 CGATGGTTAAGAAGATCAGAAGTCG 59.543 44.000 0.00 0.00 0.00 4.18
453 454 5.073311 TGGTTAAGAAGATCAGAAGTCGG 57.927 43.478 0.00 0.00 0.00 4.79
454 455 4.081642 TGGTTAAGAAGATCAGAAGTCGGG 60.082 45.833 0.00 0.00 0.00 5.14
455 456 4.081586 GGTTAAGAAGATCAGAAGTCGGGT 60.082 45.833 0.00 0.00 0.00 5.28
456 457 3.601443 AAGAAGATCAGAAGTCGGGTG 57.399 47.619 0.00 0.00 0.00 4.61
488 490 1.067821 GGGTGGACTTATGAGAGAGCG 59.932 57.143 0.00 0.00 0.00 5.03
494 496 0.461548 CTTATGAGAGAGCGGCCACA 59.538 55.000 2.24 0.00 0.00 4.17
495 497 0.901827 TTATGAGAGAGCGGCCACAA 59.098 50.000 2.24 0.00 0.00 3.33
505 507 4.013728 AGAGCGGCCACAATAACATTTTA 58.986 39.130 2.24 0.00 0.00 1.52
506 508 4.461081 AGAGCGGCCACAATAACATTTTAA 59.539 37.500 2.24 0.00 0.00 1.52
509 511 6.868622 AGCGGCCACAATAACATTTTAATTA 58.131 32.000 2.24 0.00 0.00 1.40
511 513 7.984617 AGCGGCCACAATAACATTTTAATTATT 59.015 29.630 2.24 0.00 32.43 1.40
512 514 9.250624 GCGGCCACAATAACATTTTAATTATTA 57.749 29.630 2.24 0.00 31.34 0.98
537 539 5.508200 TTTTGTGTTGAGGGTGTAACATC 57.492 39.130 0.00 0.00 39.98 3.06
542 544 6.539173 TGTGTTGAGGGTGTAACATCTTAAT 58.461 36.000 0.00 0.00 39.98 1.40
575 577 3.260884 ACATCAACGGTCCACATCTTAGT 59.739 43.478 0.00 0.00 0.00 2.24
588 590 6.599244 TCCACATCTTAGTCCATGATTTCAAC 59.401 38.462 0.00 0.00 0.00 3.18
632 635 5.163884 GGAAAACACGACACTAAAGATAGCC 60.164 44.000 0.00 0.00 31.96 3.93
650 653 2.906897 CGGGCGCAGGGCAATTAT 60.907 61.111 10.83 0.00 46.16 1.28
668 672 2.668550 GCACCCAACACGTCTCCC 60.669 66.667 0.00 0.00 0.00 4.30
726 730 3.330720 CCACGGCCCCTCTTCCTT 61.331 66.667 0.00 0.00 0.00 3.36
727 731 2.757077 CACGGCCCCTCTTCCTTT 59.243 61.111 0.00 0.00 0.00 3.11
740 744 0.321671 TTCCTTTCTCCGCTCACCTG 59.678 55.000 0.00 0.00 0.00 4.00
916 926 4.007940 TTGCGCGGCGTCTCAAAC 62.008 61.111 24.46 5.59 0.00 2.93
917 927 4.961511 TGCGCGGCGTCTCAAACT 62.962 61.111 24.46 0.00 0.00 2.66
918 928 4.135493 GCGCGGCGTCTCAAACTC 62.135 66.667 24.46 0.00 0.00 3.01
919 929 2.733218 CGCGGCGTCTCAAACTCA 60.733 61.111 15.36 0.00 0.00 3.41
920 930 2.307309 CGCGGCGTCTCAAACTCAA 61.307 57.895 15.36 0.00 0.00 3.02
921 931 1.827315 CGCGGCGTCTCAAACTCAAA 61.827 55.000 15.36 0.00 0.00 2.69
944 954 1.000993 ACTCGATCCTCTGCAGGGT 59.999 57.895 13.79 0.00 40.80 4.34
1431 1450 3.863424 CCGCTTCTGAACACGTATTATGT 59.137 43.478 0.00 0.00 0.00 2.29
1441 1460 1.758280 ACGTATTATGTCCCGGCTTCA 59.242 47.619 0.00 0.00 0.00 3.02
1529 1550 6.755206 TCTGAAATATAGTCACAATACCCCG 58.245 40.000 0.00 0.00 0.00 5.73
1530 1551 6.551975 TCTGAAATATAGTCACAATACCCCGA 59.448 38.462 0.00 0.00 0.00 5.14
1531 1552 7.234782 TCTGAAATATAGTCACAATACCCCGAT 59.765 37.037 0.00 0.00 0.00 4.18
1533 1554 5.934402 ATATAGTCACAATACCCCGATCC 57.066 43.478 0.00 0.00 0.00 3.36
1534 1555 1.129058 AGTCACAATACCCCGATCCC 58.871 55.000 0.00 0.00 0.00 3.85
1535 1556 1.129058 GTCACAATACCCCGATCCCT 58.871 55.000 0.00 0.00 0.00 4.20
1536 1557 1.070289 GTCACAATACCCCGATCCCTC 59.930 57.143 0.00 0.00 0.00 4.30
1538 1559 1.488812 CACAATACCCCGATCCCTCAA 59.511 52.381 0.00 0.00 0.00 3.02
1539 1560 2.106511 CACAATACCCCGATCCCTCAAT 59.893 50.000 0.00 0.00 0.00 2.57
1540 1561 2.372172 ACAATACCCCGATCCCTCAATC 59.628 50.000 0.00 0.00 0.00 2.67
1541 1562 1.267121 ATACCCCGATCCCTCAATCG 58.733 55.000 0.00 0.00 46.28 3.34
1551 1579 2.477245 TCCCTCAATCGGATCAAGGAA 58.523 47.619 16.29 0.00 0.00 3.36
1554 1582 3.567164 CCCTCAATCGGATCAAGGAAATG 59.433 47.826 16.29 0.00 0.00 2.32
1555 1583 3.004106 CCTCAATCGGATCAAGGAAATGC 59.996 47.826 11.36 0.00 0.00 3.56
1561 1589 1.202114 GGATCAAGGAAATGCGCACAA 59.798 47.619 14.90 0.00 0.00 3.33
1563 1591 2.879002 TCAAGGAAATGCGCACAAAA 57.121 40.000 14.90 0.00 0.00 2.44
1565 1593 3.058450 TCAAGGAAATGCGCACAAAATG 58.942 40.909 14.90 8.48 0.00 2.32
1586 1614 2.961062 GCAATTATCCAGGGCATGTTCT 59.039 45.455 0.00 0.00 0.00 3.01
1587 1615 3.385755 GCAATTATCCAGGGCATGTTCTT 59.614 43.478 0.00 0.00 0.00 2.52
1594 1622 4.973168 TCCAGGGCATGTTCTTATCATAC 58.027 43.478 0.00 0.00 0.00 2.39
1596 1624 4.758674 CCAGGGCATGTTCTTATCATACAG 59.241 45.833 0.00 0.00 0.00 2.74
1603 1631 9.241317 GGCATGTTCTTATCATACAGAAAAATG 57.759 33.333 0.00 0.00 32.95 2.32
1612 1640 9.986833 TTATCATACAGAAAAATGTTCATGTCG 57.013 29.630 0.00 0.00 34.56 4.35
1774 1802 1.450531 GCCTCCAAATCCATCCAGCG 61.451 60.000 0.00 0.00 0.00 5.18
1877 1910 3.340814 AGTAAGCATGGGTTCTGTGAG 57.659 47.619 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.134280 AGATCAAAGTCGATGGGGCAG 60.134 52.381 0.00 0.00 0.00 4.85
1 2 0.911769 AGATCAAAGTCGATGGGGCA 59.088 50.000 0.00 0.00 0.00 5.36
2 3 2.044123 AAGATCAAAGTCGATGGGGC 57.956 50.000 0.00 0.00 0.00 5.80
3 4 3.347216 ACAAAGATCAAAGTCGATGGGG 58.653 45.455 0.00 0.00 0.00 4.96
4 5 4.216257 ACAACAAAGATCAAAGTCGATGGG 59.784 41.667 0.00 0.00 0.00 4.00
5 6 5.362556 ACAACAAAGATCAAAGTCGATGG 57.637 39.130 0.00 0.00 0.00 3.51
6 7 6.307155 GGTACAACAAAGATCAAAGTCGATG 58.693 40.000 0.00 0.00 0.00 3.84
7 8 5.120208 CGGTACAACAAAGATCAAAGTCGAT 59.880 40.000 0.00 0.00 0.00 3.59
8 9 4.446385 CGGTACAACAAAGATCAAAGTCGA 59.554 41.667 0.00 0.00 0.00 4.20
9 10 4.446385 TCGGTACAACAAAGATCAAAGTCG 59.554 41.667 0.00 0.00 0.00 4.18
10 11 5.917541 TCGGTACAACAAAGATCAAAGTC 57.082 39.130 0.00 0.00 0.00 3.01
11 12 6.293955 CCAATCGGTACAACAAAGATCAAAGT 60.294 38.462 0.00 0.00 0.00 2.66
12 13 6.086222 CCAATCGGTACAACAAAGATCAAAG 58.914 40.000 0.00 0.00 0.00 2.77
13 14 5.533154 ACCAATCGGTACAACAAAGATCAAA 59.467 36.000 0.00 0.00 46.71 2.69
14 15 5.049060 CACCAATCGGTACAACAAAGATCAA 60.049 40.000 0.00 0.00 46.94 2.57
15 16 4.454161 CACCAATCGGTACAACAAAGATCA 59.546 41.667 0.00 0.00 46.94 2.92
16 17 4.142687 CCACCAATCGGTACAACAAAGATC 60.143 45.833 0.00 0.00 46.94 2.75
17 18 3.756434 CCACCAATCGGTACAACAAAGAT 59.244 43.478 0.00 0.00 46.94 2.40
18 19 3.142951 CCACCAATCGGTACAACAAAGA 58.857 45.455 0.00 0.00 46.94 2.52
19 20 3.142951 TCCACCAATCGGTACAACAAAG 58.857 45.455 0.00 0.00 46.94 2.77
20 21 3.142951 CTCCACCAATCGGTACAACAAA 58.857 45.455 0.00 0.00 46.94 2.83
21 22 2.369203 TCTCCACCAATCGGTACAACAA 59.631 45.455 0.00 0.00 46.94 2.83
22 23 1.972075 TCTCCACCAATCGGTACAACA 59.028 47.619 0.00 0.00 46.94 3.33
23 24 2.754946 TCTCCACCAATCGGTACAAC 57.245 50.000 0.00 0.00 46.94 3.32
24 25 3.773418 TTTCTCCACCAATCGGTACAA 57.227 42.857 0.00 0.00 46.94 2.41
25 26 3.370103 GGATTTCTCCACCAATCGGTACA 60.370 47.826 0.00 0.00 46.94 2.90
26 27 3.203716 GGATTTCTCCACCAATCGGTAC 58.796 50.000 0.00 0.00 46.94 3.34
27 28 2.841266 TGGATTTCTCCACCAATCGGTA 59.159 45.455 0.00 0.00 46.94 4.02
29 30 2.418368 TGGATTTCTCCACCAATCGG 57.582 50.000 0.00 0.00 46.95 4.18
38 39 6.642950 CGACACAGTATAAGATGGATTTCTCC 59.357 42.308 0.00 0.00 42.45 3.71
39 40 6.144724 GCGACACAGTATAAGATGGATTTCTC 59.855 42.308 0.00 0.00 0.00 2.87
40 41 5.986135 GCGACACAGTATAAGATGGATTTCT 59.014 40.000 0.00 0.00 0.00 2.52
41 42 5.753438 TGCGACACAGTATAAGATGGATTTC 59.247 40.000 0.00 0.00 0.00 2.17
42 43 5.670485 TGCGACACAGTATAAGATGGATTT 58.330 37.500 0.00 0.00 0.00 2.17
43 44 5.276461 TGCGACACAGTATAAGATGGATT 57.724 39.130 0.00 0.00 0.00 3.01
44 45 4.937201 TGCGACACAGTATAAGATGGAT 57.063 40.909 0.00 0.00 0.00 3.41
45 46 4.340950 TCATGCGACACAGTATAAGATGGA 59.659 41.667 0.00 0.00 0.00 3.41
46 47 4.445718 GTCATGCGACACAGTATAAGATGG 59.554 45.833 0.00 0.00 42.13 3.51
47 48 4.445718 GGTCATGCGACACAGTATAAGATG 59.554 45.833 0.00 0.00 44.54 2.90
48 49 4.621991 GGTCATGCGACACAGTATAAGAT 58.378 43.478 0.00 0.00 44.54 2.40
49 50 3.488553 CGGTCATGCGACACAGTATAAGA 60.489 47.826 0.00 0.00 44.54 2.10
50 51 2.789339 CGGTCATGCGACACAGTATAAG 59.211 50.000 0.00 0.00 44.54 1.73
51 52 2.424246 TCGGTCATGCGACACAGTATAA 59.576 45.455 0.00 0.00 44.54 0.98
52 53 2.018515 TCGGTCATGCGACACAGTATA 58.981 47.619 0.00 0.00 44.54 1.47
53 54 0.815095 TCGGTCATGCGACACAGTAT 59.185 50.000 0.00 0.00 44.54 2.12
54 55 0.109458 GTCGGTCATGCGACACAGTA 60.109 55.000 17.55 0.00 44.54 2.74
55 56 1.372997 GTCGGTCATGCGACACAGT 60.373 57.895 17.55 0.00 44.54 3.55
56 57 1.080501 AGTCGGTCATGCGACACAG 60.081 57.895 22.35 2.95 44.54 3.66
57 58 1.372872 CAGTCGGTCATGCGACACA 60.373 57.895 22.35 0.00 44.54 3.72
58 59 1.073216 CTCAGTCGGTCATGCGACAC 61.073 60.000 22.35 1.64 44.54 3.67
59 60 1.212751 CTCAGTCGGTCATGCGACA 59.787 57.895 22.35 7.04 44.54 4.35
60 61 1.517257 CCTCAGTCGGTCATGCGAC 60.517 63.158 15.46 15.46 41.80 5.19
61 62 1.037579 ATCCTCAGTCGGTCATGCGA 61.038 55.000 0.00 0.00 0.00 5.10
62 63 0.179100 AATCCTCAGTCGGTCATGCG 60.179 55.000 0.00 0.00 0.00 4.73
63 64 2.029838 AAATCCTCAGTCGGTCATGC 57.970 50.000 0.00 0.00 0.00 4.06
64 65 4.568359 CACTAAAATCCTCAGTCGGTCATG 59.432 45.833 0.00 0.00 0.00 3.07
65 66 4.466370 TCACTAAAATCCTCAGTCGGTCAT 59.534 41.667 0.00 0.00 0.00 3.06
66 67 3.830178 TCACTAAAATCCTCAGTCGGTCA 59.170 43.478 0.00 0.00 0.00 4.02
67 68 4.158025 TCTCACTAAAATCCTCAGTCGGTC 59.842 45.833 0.00 0.00 0.00 4.79
68 69 4.082136 GTCTCACTAAAATCCTCAGTCGGT 60.082 45.833 0.00 0.00 0.00 4.69
69 70 4.158764 AGTCTCACTAAAATCCTCAGTCGG 59.841 45.833 0.00 0.00 0.00 4.79
70 71 5.124776 AGAGTCTCACTAAAATCCTCAGTCG 59.875 44.000 1.94 0.00 0.00 4.18
71 72 6.524101 AGAGTCTCACTAAAATCCTCAGTC 57.476 41.667 1.94 0.00 0.00 3.51
72 73 6.926630 AAGAGTCTCACTAAAATCCTCAGT 57.073 37.500 1.94 0.00 0.00 3.41
73 74 7.118971 CCAAAAGAGTCTCACTAAAATCCTCAG 59.881 40.741 1.94 0.00 0.00 3.35
74 75 6.936900 CCAAAAGAGTCTCACTAAAATCCTCA 59.063 38.462 1.94 0.00 0.00 3.86
75 76 6.128145 GCCAAAAGAGTCTCACTAAAATCCTC 60.128 42.308 1.94 0.00 0.00 3.71
76 77 5.707764 GCCAAAAGAGTCTCACTAAAATCCT 59.292 40.000 1.94 0.00 0.00 3.24
77 78 5.707764 AGCCAAAAGAGTCTCACTAAAATCC 59.292 40.000 1.94 0.00 0.00 3.01
78 79 6.809630 AGCCAAAAGAGTCTCACTAAAATC 57.190 37.500 1.94 0.00 0.00 2.17
79 80 7.719633 TGTAAGCCAAAAGAGTCTCACTAAAAT 59.280 33.333 1.94 0.00 0.00 1.82
80 81 7.012044 GTGTAAGCCAAAAGAGTCTCACTAAAA 59.988 37.037 1.94 0.00 0.00 1.52
81 82 6.482308 GTGTAAGCCAAAAGAGTCTCACTAAA 59.518 38.462 1.94 0.00 0.00 1.85
82 83 5.989777 GTGTAAGCCAAAAGAGTCTCACTAA 59.010 40.000 1.94 0.00 0.00 2.24
83 84 5.304614 AGTGTAAGCCAAAAGAGTCTCACTA 59.695 40.000 1.94 0.00 32.00 2.74
84 85 4.101741 AGTGTAAGCCAAAAGAGTCTCACT 59.898 41.667 1.94 0.00 0.00 3.41
85 86 4.381411 AGTGTAAGCCAAAAGAGTCTCAC 58.619 43.478 1.94 0.00 0.00 3.51
86 87 4.503296 GGAGTGTAAGCCAAAAGAGTCTCA 60.503 45.833 1.94 0.00 0.00 3.27
87 88 3.997681 GGAGTGTAAGCCAAAAGAGTCTC 59.002 47.826 0.00 0.00 0.00 3.36
88 89 3.648545 AGGAGTGTAAGCCAAAAGAGTCT 59.351 43.478 0.00 0.00 0.00 3.24
89 90 3.997681 GAGGAGTGTAAGCCAAAAGAGTC 59.002 47.826 0.00 0.00 0.00 3.36
90 91 3.555168 CGAGGAGTGTAAGCCAAAAGAGT 60.555 47.826 0.00 0.00 0.00 3.24
91 92 2.996621 CGAGGAGTGTAAGCCAAAAGAG 59.003 50.000 0.00 0.00 0.00 2.85
92 93 2.631062 TCGAGGAGTGTAAGCCAAAAGA 59.369 45.455 0.00 0.00 0.00 2.52
93 94 2.996621 CTCGAGGAGTGTAAGCCAAAAG 59.003 50.000 3.91 0.00 0.00 2.27
94 95 2.870435 GCTCGAGGAGTGTAAGCCAAAA 60.870 50.000 15.58 0.00 31.39 2.44
95 96 1.337823 GCTCGAGGAGTGTAAGCCAAA 60.338 52.381 15.58 0.00 31.39 3.28
96 97 0.246635 GCTCGAGGAGTGTAAGCCAA 59.753 55.000 15.58 0.00 31.39 4.52
97 98 0.612174 AGCTCGAGGAGTGTAAGCCA 60.612 55.000 15.58 0.00 33.43 4.75
98 99 0.101579 GAGCTCGAGGAGTGTAAGCC 59.898 60.000 15.58 0.00 33.43 4.35
99 100 1.099689 AGAGCTCGAGGAGTGTAAGC 58.900 55.000 15.58 0.00 31.39 3.09
100 101 3.191581 TGAAAGAGCTCGAGGAGTGTAAG 59.808 47.826 15.58 0.00 31.39 2.34
101 102 3.154710 TGAAAGAGCTCGAGGAGTGTAA 58.845 45.455 15.58 0.00 31.39 2.41
102 103 2.791655 TGAAAGAGCTCGAGGAGTGTA 58.208 47.619 15.58 0.00 31.39 2.90
103 104 1.621992 TGAAAGAGCTCGAGGAGTGT 58.378 50.000 15.58 0.00 31.39 3.55
104 105 2.957491 ATGAAAGAGCTCGAGGAGTG 57.043 50.000 15.58 0.00 31.39 3.51
105 106 4.521256 GGTATATGAAAGAGCTCGAGGAGT 59.479 45.833 15.58 0.00 31.39 3.85
106 107 4.764823 AGGTATATGAAAGAGCTCGAGGAG 59.235 45.833 15.58 0.00 0.00 3.69
107 108 4.730966 AGGTATATGAAAGAGCTCGAGGA 58.269 43.478 15.58 0.00 0.00 3.71
108 109 4.520874 TGAGGTATATGAAAGAGCTCGAGG 59.479 45.833 15.58 0.00 39.93 4.63
109 110 5.697473 TGAGGTATATGAAAGAGCTCGAG 57.303 43.478 8.45 8.45 39.93 4.04
110 111 5.770162 TCATGAGGTATATGAAAGAGCTCGA 59.230 40.000 8.37 0.00 39.93 4.04
111 112 6.018589 TCATGAGGTATATGAAAGAGCTCG 57.981 41.667 8.37 0.00 39.93 5.03
112 113 7.225784 TCTCATGAGGTATATGAAAGAGCTC 57.774 40.000 22.42 5.27 38.04 4.09
113 114 7.609097 TTCTCATGAGGTATATGAAAGAGCT 57.391 36.000 22.42 0.00 34.41 4.09
114 115 8.668510 TTTTCTCATGAGGTATATGAAAGAGC 57.331 34.615 22.42 0.00 34.41 4.09
119 120 9.511272 CCATCATTTTCTCATGAGGTATATGAA 57.489 33.333 22.42 5.09 36.60 2.57
120 121 8.105197 CCCATCATTTTCTCATGAGGTATATGA 58.895 37.037 22.42 21.95 36.60 2.15
121 122 7.886970 ACCCATCATTTTCTCATGAGGTATATG 59.113 37.037 22.42 18.38 36.60 1.78
122 123 7.993416 ACCCATCATTTTCTCATGAGGTATAT 58.007 34.615 22.42 8.91 36.60 0.86
123 124 7.392766 ACCCATCATTTTCTCATGAGGTATA 57.607 36.000 22.42 7.05 36.60 1.47
124 125 6.271585 ACCCATCATTTTCTCATGAGGTAT 57.728 37.500 22.42 10.47 36.60 2.73
125 126 5.715439 ACCCATCATTTTCTCATGAGGTA 57.285 39.130 22.42 8.50 36.60 3.08
126 127 4.598036 ACCCATCATTTTCTCATGAGGT 57.402 40.909 22.42 6.51 36.60 3.85
127 128 5.933617 TCTACCCATCATTTTCTCATGAGG 58.066 41.667 22.42 6.24 36.60 3.86
128 129 6.017275 GCTTCTACCCATCATTTTCTCATGAG 60.017 42.308 17.07 17.07 36.60 2.90
129 130 5.824624 GCTTCTACCCATCATTTTCTCATGA 59.175 40.000 0.00 0.00 37.58 3.07
130 131 5.009410 GGCTTCTACCCATCATTTTCTCATG 59.991 44.000 0.00 0.00 0.00 3.07
131 132 5.136105 GGCTTCTACCCATCATTTTCTCAT 58.864 41.667 0.00 0.00 0.00 2.90
132 133 4.526970 GGCTTCTACCCATCATTTTCTCA 58.473 43.478 0.00 0.00 0.00 3.27
133 134 3.561725 CGGCTTCTACCCATCATTTTCTC 59.438 47.826 0.00 0.00 0.00 2.87
134 135 3.545703 CGGCTTCTACCCATCATTTTCT 58.454 45.455 0.00 0.00 0.00 2.52
135 136 2.618709 CCGGCTTCTACCCATCATTTTC 59.381 50.000 0.00 0.00 0.00 2.29
136 137 2.654863 CCGGCTTCTACCCATCATTTT 58.345 47.619 0.00 0.00 0.00 1.82
137 138 1.133792 CCCGGCTTCTACCCATCATTT 60.134 52.381 0.00 0.00 0.00 2.32
138 139 0.474184 CCCGGCTTCTACCCATCATT 59.526 55.000 0.00 0.00 0.00 2.57
139 140 2.056906 GCCCGGCTTCTACCCATCAT 62.057 60.000 0.71 0.00 0.00 2.45
140 141 2.742116 GCCCGGCTTCTACCCATCA 61.742 63.158 0.71 0.00 0.00 3.07
141 142 1.984288 AAGCCCGGCTTCTACCCATC 61.984 60.000 19.53 0.00 46.77 3.51
142 143 2.001269 AAGCCCGGCTTCTACCCAT 61.001 57.895 19.53 0.00 46.77 4.00
143 144 2.609610 AAGCCCGGCTTCTACCCA 60.610 61.111 19.53 0.00 46.77 4.51
151 152 0.251341 ATGTCTTTCAAAGCCCGGCT 60.251 50.000 5.94 5.94 42.56 5.52
152 153 0.603065 AATGTCTTTCAAAGCCCGGC 59.397 50.000 0.00 0.00 0.00 6.13
153 154 3.243704 TGAAAATGTCTTTCAAAGCCCGG 60.244 43.478 0.00 0.00 35.69 5.73
154 155 3.976169 TGAAAATGTCTTTCAAAGCCCG 58.024 40.909 0.00 0.00 35.69 6.13
155 156 4.152938 GCATGAAAATGTCTTTCAAAGCCC 59.847 41.667 0.00 0.00 41.16 5.19
156 157 4.751098 TGCATGAAAATGTCTTTCAAAGCC 59.249 37.500 17.69 0.00 41.16 4.35
157 158 5.910637 TGCATGAAAATGTCTTTCAAAGC 57.089 34.783 15.39 15.39 41.16 3.51
158 159 6.795114 GCAATGCATGAAAATGTCTTTCAAAG 59.205 34.615 0.00 0.00 41.16 2.77
159 160 6.293516 GGCAATGCATGAAAATGTCTTTCAAA 60.294 34.615 7.79 0.00 41.16 2.69
160 161 5.179742 GGCAATGCATGAAAATGTCTTTCAA 59.820 36.000 7.79 0.00 41.16 2.69
161 162 4.691685 GGCAATGCATGAAAATGTCTTTCA 59.308 37.500 7.79 2.64 41.91 2.69
162 163 4.933400 AGGCAATGCATGAAAATGTCTTTC 59.067 37.500 7.79 0.00 0.00 2.62
163 164 4.901868 AGGCAATGCATGAAAATGTCTTT 58.098 34.783 7.79 0.00 0.00 2.52
164 165 4.546829 AGGCAATGCATGAAAATGTCTT 57.453 36.364 7.79 0.00 0.00 3.01
165 166 4.250464 CAAGGCAATGCATGAAAATGTCT 58.750 39.130 7.79 0.00 0.00 3.41
166 167 3.181514 GCAAGGCAATGCATGAAAATGTC 60.182 43.478 7.79 0.00 45.70 3.06
167 168 2.745281 GCAAGGCAATGCATGAAAATGT 59.255 40.909 7.79 0.00 45.70 2.71
168 169 3.398954 GCAAGGCAATGCATGAAAATG 57.601 42.857 7.79 0.00 45.70 2.32
177 178 2.030958 GCACAAGGCAAGGCAATGC 61.031 57.895 0.00 0.00 45.67 3.56
178 179 1.735198 CGCACAAGGCAAGGCAATG 60.735 57.895 0.00 0.00 45.17 2.82
179 180 2.202395 ACGCACAAGGCAAGGCAAT 61.202 52.632 0.00 0.00 45.17 3.56
180 181 2.832661 ACGCACAAGGCAAGGCAA 60.833 55.556 0.00 0.00 45.17 4.52
181 182 3.594775 CACGCACAAGGCAAGGCA 61.595 61.111 0.00 0.00 45.17 4.75
182 183 3.542629 GACACGCACAAGGCAAGGC 62.543 63.158 0.00 0.00 45.17 4.35
183 184 1.518056 ATGACACGCACAAGGCAAGG 61.518 55.000 0.00 0.00 45.17 3.61
184 185 1.155889 TATGACACGCACAAGGCAAG 58.844 50.000 0.00 0.00 45.17 4.01
185 186 1.819928 ATATGACACGCACAAGGCAA 58.180 45.000 0.00 0.00 45.17 4.52
186 187 1.468127 CAATATGACACGCACAAGGCA 59.532 47.619 0.00 0.00 45.17 4.75
187 188 1.795162 GCAATATGACACGCACAAGGC 60.795 52.381 0.00 0.00 39.90 4.35
188 189 1.739466 AGCAATATGACACGCACAAGG 59.261 47.619 0.00 0.00 0.00 3.61
189 190 2.416202 TGAGCAATATGACACGCACAAG 59.584 45.455 0.00 0.00 0.00 3.16
190 191 2.421619 TGAGCAATATGACACGCACAA 58.578 42.857 0.00 0.00 0.00 3.33
191 192 2.091852 TGAGCAATATGACACGCACA 57.908 45.000 0.00 0.00 0.00 4.57
192 193 3.804325 ACTATGAGCAATATGACACGCAC 59.196 43.478 0.00 0.00 0.00 5.34
193 194 3.803778 CACTATGAGCAATATGACACGCA 59.196 43.478 0.00 0.00 0.00 5.24
194 195 3.804325 ACACTATGAGCAATATGACACGC 59.196 43.478 0.00 0.00 0.00 5.34
195 196 5.973651 AACACTATGAGCAATATGACACG 57.026 39.130 0.00 0.00 0.00 4.49
196 197 6.761242 TGGTAACACTATGAGCAATATGACAC 59.239 38.462 0.00 0.00 46.17 3.67
197 198 6.883744 TGGTAACACTATGAGCAATATGACA 58.116 36.000 0.00 0.00 46.17 3.58
198 199 6.073548 GCTGGTAACACTATGAGCAATATGAC 60.074 42.308 0.00 0.00 46.17 3.06
199 200 5.991606 GCTGGTAACACTATGAGCAATATGA 59.008 40.000 0.00 0.00 46.17 2.15
200 201 5.759763 TGCTGGTAACACTATGAGCAATATG 59.240 40.000 0.00 0.00 46.17 1.78
201 202 5.760253 GTGCTGGTAACACTATGAGCAATAT 59.240 40.000 0.00 0.00 46.17 1.28
202 203 5.116180 GTGCTGGTAACACTATGAGCAATA 58.884 41.667 0.00 0.00 46.17 1.90
203 204 3.941483 GTGCTGGTAACACTATGAGCAAT 59.059 43.478 0.00 0.00 46.17 3.56
204 205 3.334691 GTGCTGGTAACACTATGAGCAA 58.665 45.455 0.00 0.00 46.17 3.91
205 206 2.354704 GGTGCTGGTAACACTATGAGCA 60.355 50.000 0.00 0.00 46.17 4.26
206 207 2.280628 GGTGCTGGTAACACTATGAGC 58.719 52.381 0.00 0.00 46.17 4.26
207 208 2.094182 ACGGTGCTGGTAACACTATGAG 60.094 50.000 0.00 0.00 46.17 2.90
208 209 1.897133 ACGGTGCTGGTAACACTATGA 59.103 47.619 0.00 0.00 46.17 2.15
209 210 2.380084 ACGGTGCTGGTAACACTATG 57.620 50.000 0.00 0.00 46.17 2.23
210 211 3.258872 TGTAACGGTGCTGGTAACACTAT 59.741 43.478 0.00 0.00 46.17 2.12
211 212 2.627221 TGTAACGGTGCTGGTAACACTA 59.373 45.455 0.00 0.00 46.17 2.74
212 213 1.413445 TGTAACGGTGCTGGTAACACT 59.587 47.619 0.00 0.00 46.17 3.55
213 214 1.868469 TGTAACGGTGCTGGTAACAC 58.132 50.000 0.00 0.00 46.17 3.32
215 216 2.874086 ACTTTGTAACGGTGCTGGTAAC 59.126 45.455 0.00 0.00 0.00 2.50
216 217 3.132925 GACTTTGTAACGGTGCTGGTAA 58.867 45.455 0.00 0.00 0.00 2.85
217 218 2.102757 TGACTTTGTAACGGTGCTGGTA 59.897 45.455 0.00 0.00 0.00 3.25
218 219 1.134340 TGACTTTGTAACGGTGCTGGT 60.134 47.619 0.00 0.00 0.00 4.00
219 220 1.531149 CTGACTTTGTAACGGTGCTGG 59.469 52.381 0.00 0.00 0.00 4.85
220 221 2.476619 CTCTGACTTTGTAACGGTGCTG 59.523 50.000 0.00 0.00 0.00 4.41
221 222 2.102588 ACTCTGACTTTGTAACGGTGCT 59.897 45.455 0.00 0.00 0.00 4.40
222 223 2.221055 CACTCTGACTTTGTAACGGTGC 59.779 50.000 0.00 0.00 0.00 5.01
223 224 2.800544 CCACTCTGACTTTGTAACGGTG 59.199 50.000 0.00 0.00 0.00 4.94
224 225 2.224209 CCCACTCTGACTTTGTAACGGT 60.224 50.000 0.00 0.00 0.00 4.83
225 226 2.413837 CCCACTCTGACTTTGTAACGG 58.586 52.381 0.00 0.00 0.00 4.44
226 227 2.413837 CCCCACTCTGACTTTGTAACG 58.586 52.381 0.00 0.00 0.00 3.18
227 228 2.370849 TCCCCCACTCTGACTTTGTAAC 59.629 50.000 0.00 0.00 0.00 2.50
228 229 2.696775 TCCCCCACTCTGACTTTGTAA 58.303 47.619 0.00 0.00 0.00 2.41
229 230 2.370849 GTTCCCCCACTCTGACTTTGTA 59.629 50.000 0.00 0.00 0.00 2.41
230 231 1.143073 GTTCCCCCACTCTGACTTTGT 59.857 52.381 0.00 0.00 0.00 2.83
231 232 1.878102 CGTTCCCCCACTCTGACTTTG 60.878 57.143 0.00 0.00 0.00 2.77
232 233 0.396811 CGTTCCCCCACTCTGACTTT 59.603 55.000 0.00 0.00 0.00 2.66
233 234 0.471211 TCGTTCCCCCACTCTGACTT 60.471 55.000 0.00 0.00 0.00 3.01
234 235 0.900647 CTCGTTCCCCCACTCTGACT 60.901 60.000 0.00 0.00 0.00 3.41
235 236 1.186267 ACTCGTTCCCCCACTCTGAC 61.186 60.000 0.00 0.00 0.00 3.51
236 237 0.471211 AACTCGTTCCCCCACTCTGA 60.471 55.000 0.00 0.00 0.00 3.27
237 238 0.037232 GAACTCGTTCCCCCACTCTG 60.037 60.000 0.00 0.00 33.64 3.35
238 239 0.471211 TGAACTCGTTCCCCCACTCT 60.471 55.000 7.28 0.00 38.77 3.24
239 240 0.613777 ATGAACTCGTTCCCCCACTC 59.386 55.000 7.28 0.00 38.77 3.51
240 241 0.324943 CATGAACTCGTTCCCCCACT 59.675 55.000 7.28 0.00 38.77 4.00
241 242 0.323629 TCATGAACTCGTTCCCCCAC 59.676 55.000 7.28 0.00 38.77 4.61
242 243 0.613260 CTCATGAACTCGTTCCCCCA 59.387 55.000 7.28 0.00 38.77 4.96
243 244 0.107654 CCTCATGAACTCGTTCCCCC 60.108 60.000 7.28 0.00 38.77 5.40
244 245 0.744771 GCCTCATGAACTCGTTCCCC 60.745 60.000 7.28 0.00 38.77 4.81
245 246 0.250513 AGCCTCATGAACTCGTTCCC 59.749 55.000 7.28 0.00 38.77 3.97
246 247 1.066858 TCAGCCTCATGAACTCGTTCC 60.067 52.381 7.28 0.00 38.77 3.62
247 248 2.370281 TCAGCCTCATGAACTCGTTC 57.630 50.000 0.00 2.92 39.91 3.95
248 249 2.300152 TCTTCAGCCTCATGAACTCGTT 59.700 45.455 0.00 0.00 35.40 3.85
249 250 1.895798 TCTTCAGCCTCATGAACTCGT 59.104 47.619 0.00 0.00 35.40 4.18
250 251 2.662006 TCTTCAGCCTCATGAACTCG 57.338 50.000 0.00 0.00 35.40 4.18
251 252 4.134379 TCATCTTCAGCCTCATGAACTC 57.866 45.455 0.00 0.00 35.40 3.01
252 253 4.564782 TTCATCTTCAGCCTCATGAACT 57.435 40.909 0.00 0.00 35.40 3.01
253 254 5.124645 AGATTCATCTTCAGCCTCATGAAC 58.875 41.667 0.00 0.00 37.92 3.18
254 255 5.369409 AGATTCATCTTCAGCCTCATGAA 57.631 39.130 0.00 0.00 39.09 2.57
255 256 5.369409 AAGATTCATCTTCAGCCTCATGA 57.631 39.130 0.00 0.00 43.27 3.07
256 257 6.266323 CAAAAGATTCATCTTCAGCCTCATG 58.734 40.000 2.47 0.00 45.83 3.07
257 258 5.360144 CCAAAAGATTCATCTTCAGCCTCAT 59.640 40.000 2.47 0.00 45.83 2.90
258 259 4.703575 CCAAAAGATTCATCTTCAGCCTCA 59.296 41.667 2.47 0.00 45.83 3.86
259 260 4.439837 GCCAAAAGATTCATCTTCAGCCTC 60.440 45.833 2.47 0.00 45.83 4.70
260 261 3.446516 GCCAAAAGATTCATCTTCAGCCT 59.553 43.478 2.47 0.00 45.83 4.58
261 262 3.194116 TGCCAAAAGATTCATCTTCAGCC 59.806 43.478 2.47 0.00 45.83 4.85
262 263 4.445452 TGCCAAAAGATTCATCTTCAGC 57.555 40.909 2.47 6.90 45.83 4.26
263 264 6.095021 TCAGATGCCAAAAGATTCATCTTCAG 59.905 38.462 2.47 0.00 45.83 3.02
264 265 5.947566 TCAGATGCCAAAAGATTCATCTTCA 59.052 36.000 2.47 0.00 45.83 3.02
265 266 6.446781 TCAGATGCCAAAAGATTCATCTTC 57.553 37.500 2.47 0.00 45.83 2.87
267 268 6.834451 AGAATCAGATGCCAAAAGATTCATCT 59.166 34.615 13.80 0.00 44.22 2.90
268 269 6.918569 CAGAATCAGATGCCAAAAGATTCATC 59.081 38.462 13.80 0.00 44.22 2.92
269 270 6.380274 ACAGAATCAGATGCCAAAAGATTCAT 59.620 34.615 13.80 1.81 44.22 2.57
270 271 5.713389 ACAGAATCAGATGCCAAAAGATTCA 59.287 36.000 13.80 0.00 44.22 2.57
271 272 6.034591 CACAGAATCAGATGCCAAAAGATTC 58.965 40.000 0.00 0.00 42.88 2.52
272 273 5.713389 TCACAGAATCAGATGCCAAAAGATT 59.287 36.000 0.00 0.00 0.00 2.40
273 274 5.258841 TCACAGAATCAGATGCCAAAAGAT 58.741 37.500 0.00 0.00 0.00 2.40
274 275 4.654915 TCACAGAATCAGATGCCAAAAGA 58.345 39.130 0.00 0.00 0.00 2.52
275 276 5.340803 CATCACAGAATCAGATGCCAAAAG 58.659 41.667 0.00 0.00 33.56 2.27
276 277 5.319140 CATCACAGAATCAGATGCCAAAA 57.681 39.130 0.00 0.00 33.56 2.44
277 278 4.976224 CATCACAGAATCAGATGCCAAA 57.024 40.909 0.00 0.00 33.56 3.28
295 296 2.349886 GGTCGAAGTTGTGATGAGCATC 59.650 50.000 3.55 3.55 38.29 3.91
296 297 2.289631 TGGTCGAAGTTGTGATGAGCAT 60.290 45.455 0.00 0.00 32.70 3.79
297 298 1.069978 TGGTCGAAGTTGTGATGAGCA 59.930 47.619 0.00 0.00 34.99 4.26
298 299 1.795768 TGGTCGAAGTTGTGATGAGC 58.204 50.000 0.00 0.00 0.00 4.26
299 300 3.393800 ACTTGGTCGAAGTTGTGATGAG 58.606 45.455 0.00 0.00 42.70 2.90
300 301 3.069586 AGACTTGGTCGAAGTTGTGATGA 59.930 43.478 1.45 0.00 45.48 2.92
301 302 3.393800 AGACTTGGTCGAAGTTGTGATG 58.606 45.455 1.45 0.00 45.48 3.07
302 303 3.753294 AGACTTGGTCGAAGTTGTGAT 57.247 42.857 1.45 0.00 45.48 3.06
303 304 3.194861 CAAGACTTGGTCGAAGTTGTGA 58.805 45.455 7.35 0.00 45.48 3.58
304 305 2.287915 CCAAGACTTGGTCGAAGTTGTG 59.712 50.000 23.92 3.75 45.48 3.33
305 306 2.561569 CCAAGACTTGGTCGAAGTTGT 58.438 47.619 23.92 0.00 45.48 3.32
316 317 0.895559 GGGCCCAAGACCAAGACTTG 60.896 60.000 19.95 8.31 42.72 3.16
317 318 1.360393 TGGGCCCAAGACCAAGACTT 61.360 55.000 26.33 0.00 32.89 3.01
318 319 1.142688 ATGGGCCCAAGACCAAGACT 61.143 55.000 32.58 4.59 40.73 3.24
319 320 0.623723 TATGGGCCCAAGACCAAGAC 59.376 55.000 32.58 0.00 40.73 3.01
320 321 1.607225 ATATGGGCCCAAGACCAAGA 58.393 50.000 32.58 0.43 40.73 3.02
321 322 2.711009 TCTATATGGGCCCAAGACCAAG 59.289 50.000 32.58 19.56 40.73 3.61
322 323 2.782922 TCTATATGGGCCCAAGACCAA 58.217 47.619 32.58 10.50 40.73 3.67
323 324 2.505672 TCTATATGGGCCCAAGACCA 57.494 50.000 32.58 12.33 41.76 4.02
324 325 3.054802 CAGATCTATATGGGCCCAAGACC 60.055 52.174 32.58 19.19 0.00 3.85
325 326 3.054802 CCAGATCTATATGGGCCCAAGAC 60.055 52.174 32.58 19.77 35.56 3.01
326 327 3.184628 CCAGATCTATATGGGCCCAAGA 58.815 50.000 32.58 27.51 35.56 3.02
327 328 2.915604 ACCAGATCTATATGGGCCCAAG 59.084 50.000 32.58 22.70 43.30 3.61
328 329 2.644299 CACCAGATCTATATGGGCCCAA 59.356 50.000 32.58 18.94 43.30 4.12
329 330 2.158019 TCACCAGATCTATATGGGCCCA 60.158 50.000 30.92 30.92 43.30 5.36
330 331 2.503356 CTCACCAGATCTATATGGGCCC 59.497 54.545 17.59 17.59 43.30 5.80
331 332 2.503356 CCTCACCAGATCTATATGGGCC 59.497 54.545 8.41 0.00 43.30 5.80
332 333 3.177228 ACCTCACCAGATCTATATGGGC 58.823 50.000 8.41 0.00 43.30 5.36
333 334 4.564406 GCAACCTCACCAGATCTATATGGG 60.564 50.000 8.41 0.00 43.30 4.00
334 335 4.040829 TGCAACCTCACCAGATCTATATGG 59.959 45.833 0.00 2.06 44.52 2.74
335 336 5.219343 TGCAACCTCACCAGATCTATATG 57.781 43.478 0.00 0.00 0.00 1.78
336 337 6.445451 AATGCAACCTCACCAGATCTATAT 57.555 37.500 0.00 0.00 0.00 0.86
337 338 5.509670 CGAATGCAACCTCACCAGATCTATA 60.510 44.000 0.00 0.00 0.00 1.31
338 339 4.712476 GAATGCAACCTCACCAGATCTAT 58.288 43.478 0.00 0.00 0.00 1.98
339 340 3.430790 CGAATGCAACCTCACCAGATCTA 60.431 47.826 0.00 0.00 0.00 1.98
340 341 2.679059 CGAATGCAACCTCACCAGATCT 60.679 50.000 0.00 0.00 0.00 2.75
341 342 1.667724 CGAATGCAACCTCACCAGATC 59.332 52.381 0.00 0.00 0.00 2.75
342 343 1.278985 TCGAATGCAACCTCACCAGAT 59.721 47.619 0.00 0.00 0.00 2.90
343 344 0.684535 TCGAATGCAACCTCACCAGA 59.315 50.000 0.00 0.00 0.00 3.86
344 345 1.399440 CATCGAATGCAACCTCACCAG 59.601 52.381 0.00 0.00 0.00 4.00
345 346 1.003003 TCATCGAATGCAACCTCACCA 59.997 47.619 0.00 0.00 0.00 4.17
346 347 1.737838 TCATCGAATGCAACCTCACC 58.262 50.000 0.00 0.00 0.00 4.02
347 348 2.096496 CCTTCATCGAATGCAACCTCAC 59.904 50.000 0.00 0.00 0.00 3.51
348 349 2.027285 TCCTTCATCGAATGCAACCTCA 60.027 45.455 0.00 0.00 0.00 3.86
349 350 2.632377 TCCTTCATCGAATGCAACCTC 58.368 47.619 0.00 0.00 0.00 3.85
350 351 2.787473 TCCTTCATCGAATGCAACCT 57.213 45.000 0.00 0.00 0.00 3.50
351 352 3.699067 CATTCCTTCATCGAATGCAACC 58.301 45.455 0.00 0.00 39.97 3.77
356 357 1.334419 GCGGCATTCCTTCATCGAATG 60.334 52.381 6.24 6.24 46.16 2.67
357 358 0.947244 GCGGCATTCCTTCATCGAAT 59.053 50.000 0.00 0.00 0.00 3.34
358 359 1.095228 GGCGGCATTCCTTCATCGAA 61.095 55.000 3.07 0.00 0.00 3.71
359 360 1.523711 GGCGGCATTCCTTCATCGA 60.524 57.895 3.07 0.00 0.00 3.59
360 361 1.168407 ATGGCGGCATTCCTTCATCG 61.168 55.000 20.18 0.00 0.00 3.84
361 362 0.313043 CATGGCGGCATTCCTTCATC 59.687 55.000 23.47 0.00 0.00 2.92
362 363 0.106569 TCATGGCGGCATTCCTTCAT 60.107 50.000 23.47 0.00 0.00 2.57
363 364 1.031571 GTCATGGCGGCATTCCTTCA 61.032 55.000 23.47 0.00 0.00 3.02
364 365 0.749454 AGTCATGGCGGCATTCCTTC 60.749 55.000 23.47 10.57 0.00 3.46
365 366 0.749454 GAGTCATGGCGGCATTCCTT 60.749 55.000 23.47 8.21 0.00 3.36
366 367 1.153086 GAGTCATGGCGGCATTCCT 60.153 57.895 23.47 19.73 0.00 3.36
367 368 1.442526 CTGAGTCATGGCGGCATTCC 61.443 60.000 23.47 15.16 0.00 3.01
368 369 0.745845 ACTGAGTCATGGCGGCATTC 60.746 55.000 23.47 17.75 0.00 2.67
369 370 1.028330 CACTGAGTCATGGCGGCATT 61.028 55.000 23.47 8.22 0.00 3.56
370 371 1.450848 CACTGAGTCATGGCGGCAT 60.451 57.895 20.18 20.18 0.00 4.40
371 372 2.046988 CACTGAGTCATGGCGGCA 60.047 61.111 16.34 16.34 0.00 5.69
372 373 1.237285 AAACACTGAGTCATGGCGGC 61.237 55.000 0.00 0.00 0.00 6.53
373 374 0.798776 GAAACACTGAGTCATGGCGG 59.201 55.000 0.00 0.00 0.00 6.13
374 375 1.511850 TGAAACACTGAGTCATGGCG 58.488 50.000 0.00 0.00 0.00 5.69
375 376 2.618241 TGTTGAAACACTGAGTCATGGC 59.382 45.455 0.00 0.00 33.17 4.40
376 377 4.129380 TCTGTTGAAACACTGAGTCATGG 58.871 43.478 0.00 0.00 34.70 3.66
377 378 5.106791 GGATCTGTTGAAACACTGAGTCATG 60.107 44.000 0.00 0.00 34.70 3.07
378 379 4.999950 GGATCTGTTGAAACACTGAGTCAT 59.000 41.667 0.00 0.00 34.70 3.06
379 380 4.380531 GGATCTGTTGAAACACTGAGTCA 58.619 43.478 0.00 0.00 34.70 3.41
380 381 3.748568 GGGATCTGTTGAAACACTGAGTC 59.251 47.826 0.00 0.00 34.70 3.36
381 382 3.136443 TGGGATCTGTTGAAACACTGAGT 59.864 43.478 0.00 0.00 34.70 3.41
382 383 3.499918 GTGGGATCTGTTGAAACACTGAG 59.500 47.826 0.00 0.00 34.70 3.35
383 384 3.118075 TGTGGGATCTGTTGAAACACTGA 60.118 43.478 0.00 0.00 34.70 3.41
384 385 3.213506 TGTGGGATCTGTTGAAACACTG 58.786 45.455 0.00 0.00 34.70 3.66
385 386 3.576078 TGTGGGATCTGTTGAAACACT 57.424 42.857 0.00 0.00 34.70 3.55
386 387 3.632145 ACTTGTGGGATCTGTTGAAACAC 59.368 43.478 0.00 0.00 34.70 3.32
387 388 3.897239 ACTTGTGGGATCTGTTGAAACA 58.103 40.909 0.00 0.00 37.37 2.83
388 389 4.338118 TCAACTTGTGGGATCTGTTGAAAC 59.662 41.667 0.00 0.00 42.32 2.78
389 390 4.531854 TCAACTTGTGGGATCTGTTGAAA 58.468 39.130 0.00 0.00 42.32 2.69
390 391 4.163441 TCAACTTGTGGGATCTGTTGAA 57.837 40.909 0.00 0.00 42.32 2.69
391 392 3.855255 TCAACTTGTGGGATCTGTTGA 57.145 42.857 0.00 0.00 42.81 3.18
392 393 3.885297 AGTTCAACTTGTGGGATCTGTTG 59.115 43.478 0.00 0.00 39.23 3.33
393 394 3.885297 CAGTTCAACTTGTGGGATCTGTT 59.115 43.478 0.00 0.00 0.00 3.16
394 395 3.480470 CAGTTCAACTTGTGGGATCTGT 58.520 45.455 0.00 0.00 0.00 3.41
395 396 2.816087 CCAGTTCAACTTGTGGGATCTG 59.184 50.000 0.00 0.00 0.00 2.90
396 397 2.815589 GCCAGTTCAACTTGTGGGATCT 60.816 50.000 0.00 0.00 0.00 2.75
397 398 1.541588 GCCAGTTCAACTTGTGGGATC 59.458 52.381 0.00 0.00 0.00 3.36
398 399 1.620822 GCCAGTTCAACTTGTGGGAT 58.379 50.000 0.00 0.00 0.00 3.85
399 400 0.817634 CGCCAGTTCAACTTGTGGGA 60.818 55.000 0.00 0.00 0.00 4.37
400 401 1.654220 CGCCAGTTCAACTTGTGGG 59.346 57.895 0.00 0.00 0.00 4.61
401 402 1.008538 GCGCCAGTTCAACTTGTGG 60.009 57.895 0.00 0.00 0.00 4.17
402 403 1.008538 GGCGCCAGTTCAACTTGTG 60.009 57.895 24.80 0.00 0.00 3.33
403 404 0.107831 TAGGCGCCAGTTCAACTTGT 59.892 50.000 31.54 5.27 0.00 3.16
404 405 1.453155 ATAGGCGCCAGTTCAACTTG 58.547 50.000 31.54 0.00 0.00 3.16
405 406 3.206150 CATATAGGCGCCAGTTCAACTT 58.794 45.455 31.54 6.76 0.00 2.66
406 407 2.485479 CCATATAGGCGCCAGTTCAACT 60.485 50.000 31.54 7.63 0.00 3.16
407 408 1.873591 CCATATAGGCGCCAGTTCAAC 59.126 52.381 31.54 0.00 0.00 3.18
408 409 2.254546 CCATATAGGCGCCAGTTCAA 57.745 50.000 31.54 7.86 0.00 2.69
419 420 6.037786 TCTTCTTAACCATCGCCATATAGG 57.962 41.667 0.00 0.00 41.84 2.57
420 421 7.323420 TGATCTTCTTAACCATCGCCATATAG 58.677 38.462 0.00 0.00 0.00 1.31
421 422 7.178451 TCTGATCTTCTTAACCATCGCCATATA 59.822 37.037 0.00 0.00 0.00 0.86
422 423 6.014242 TCTGATCTTCTTAACCATCGCCATAT 60.014 38.462 0.00 0.00 0.00 1.78
423 424 5.304357 TCTGATCTTCTTAACCATCGCCATA 59.696 40.000 0.00 0.00 0.00 2.74
424 425 4.101585 TCTGATCTTCTTAACCATCGCCAT 59.898 41.667 0.00 0.00 0.00 4.40
425 426 3.450817 TCTGATCTTCTTAACCATCGCCA 59.549 43.478 0.00 0.00 0.00 5.69
426 427 4.060038 TCTGATCTTCTTAACCATCGCC 57.940 45.455 0.00 0.00 0.00 5.54
427 428 5.112686 ACTTCTGATCTTCTTAACCATCGC 58.887 41.667 0.00 0.00 0.00 4.58
428 429 5.457148 CGACTTCTGATCTTCTTAACCATCG 59.543 44.000 0.00 0.00 0.00 3.84
429 430 5.751028 CCGACTTCTGATCTTCTTAACCATC 59.249 44.000 0.00 0.00 0.00 3.51
430 431 5.395768 CCCGACTTCTGATCTTCTTAACCAT 60.396 44.000 0.00 0.00 0.00 3.55
431 432 4.081642 CCCGACTTCTGATCTTCTTAACCA 60.082 45.833 0.00 0.00 0.00 3.67
432 433 4.081586 ACCCGACTTCTGATCTTCTTAACC 60.082 45.833 0.00 0.00 0.00 2.85
433 434 4.865365 CACCCGACTTCTGATCTTCTTAAC 59.135 45.833 0.00 0.00 0.00 2.01
434 435 4.081642 CCACCCGACTTCTGATCTTCTTAA 60.082 45.833 0.00 0.00 0.00 1.85
435 436 3.447586 CCACCCGACTTCTGATCTTCTTA 59.552 47.826 0.00 0.00 0.00 2.10
436 437 2.234908 CCACCCGACTTCTGATCTTCTT 59.765 50.000 0.00 0.00 0.00 2.52
437 438 1.827969 CCACCCGACTTCTGATCTTCT 59.172 52.381 0.00 0.00 0.00 2.85
438 439 1.825474 TCCACCCGACTTCTGATCTTC 59.175 52.381 0.00 0.00 0.00 2.87
439 440 1.938585 TCCACCCGACTTCTGATCTT 58.061 50.000 0.00 0.00 0.00 2.40
440 441 2.035632 GATCCACCCGACTTCTGATCT 58.964 52.381 0.00 0.00 0.00 2.75
441 442 1.757118 TGATCCACCCGACTTCTGATC 59.243 52.381 0.00 0.00 0.00 2.92
442 443 1.759445 CTGATCCACCCGACTTCTGAT 59.241 52.381 0.00 0.00 0.00 2.90
443 444 1.186200 CTGATCCACCCGACTTCTGA 58.814 55.000 0.00 0.00 0.00 3.27
444 445 1.186200 TCTGATCCACCCGACTTCTG 58.814 55.000 0.00 0.00 0.00 3.02
445 446 1.827969 CTTCTGATCCACCCGACTTCT 59.172 52.381 0.00 0.00 0.00 2.85
446 447 1.550976 ACTTCTGATCCACCCGACTTC 59.449 52.381 0.00 0.00 0.00 3.01
447 448 1.550976 GACTTCTGATCCACCCGACTT 59.449 52.381 0.00 0.00 0.00 3.01
448 449 1.187087 GACTTCTGATCCACCCGACT 58.813 55.000 0.00 0.00 0.00 4.18
449 450 0.179134 CGACTTCTGATCCACCCGAC 60.179 60.000 0.00 0.00 0.00 4.79
450 451 1.320344 CCGACTTCTGATCCACCCGA 61.320 60.000 0.00 0.00 0.00 5.14
451 452 1.141881 CCGACTTCTGATCCACCCG 59.858 63.158 0.00 0.00 0.00 5.28
452 453 1.265454 ACCCGACTTCTGATCCACCC 61.265 60.000 0.00 0.00 0.00 4.61
453 454 0.108138 CACCCGACTTCTGATCCACC 60.108 60.000 0.00 0.00 0.00 4.61
454 455 0.108138 CCACCCGACTTCTGATCCAC 60.108 60.000 0.00 0.00 0.00 4.02
455 456 0.252057 TCCACCCGACTTCTGATCCA 60.252 55.000 0.00 0.00 0.00 3.41
456 457 0.175989 GTCCACCCGACTTCTGATCC 59.824 60.000 0.00 0.00 38.57 3.36
479 481 0.901827 TTATTGTGGCCGCTCTCTCA 59.098 50.000 18.96 0.00 0.00 3.27
514 516 5.654650 AGATGTTACACCCTCAACACAAAAA 59.345 36.000 0.00 0.00 37.47 1.94
516 518 4.787551 AGATGTTACACCCTCAACACAAA 58.212 39.130 0.00 0.00 37.47 2.83
517 519 4.431416 AGATGTTACACCCTCAACACAA 57.569 40.909 0.00 0.00 37.47 3.33
518 520 4.431416 AAGATGTTACACCCTCAACACA 57.569 40.909 0.00 0.00 37.47 3.72
519 521 7.448748 AATTAAGATGTTACACCCTCAACAC 57.551 36.000 0.00 0.00 37.47 3.32
520 522 8.472007 AAAATTAAGATGTTACACCCTCAACA 57.528 30.769 0.00 0.00 38.89 3.33
521 523 7.749126 CGAAAATTAAGATGTTACACCCTCAAC 59.251 37.037 0.00 0.00 0.00 3.18
522 524 7.662258 TCGAAAATTAAGATGTTACACCCTCAA 59.338 33.333 0.00 0.00 0.00 3.02
523 525 7.162761 TCGAAAATTAAGATGTTACACCCTCA 58.837 34.615 0.00 0.00 0.00 3.86
524 526 7.605410 TCGAAAATTAAGATGTTACACCCTC 57.395 36.000 0.00 0.00 0.00 4.30
525 527 7.067008 CCATCGAAAATTAAGATGTTACACCCT 59.933 37.037 13.27 0.00 39.89 4.34
526 528 7.148137 ACCATCGAAAATTAAGATGTTACACCC 60.148 37.037 13.27 0.00 39.89 4.61
527 529 7.758495 ACCATCGAAAATTAAGATGTTACACC 58.242 34.615 13.27 0.00 39.89 4.16
537 539 6.905076 CCGTTGATGTACCATCGAAAATTAAG 59.095 38.462 0.00 0.00 32.69 1.85
542 544 3.666274 ACCGTTGATGTACCATCGAAAA 58.334 40.909 0.00 0.00 32.69 2.29
562 564 6.115446 TGAAATCATGGACTAAGATGTGGAC 58.885 40.000 0.00 0.00 0.00 4.02
575 577 1.750193 GAGCGGGTTGAAATCATGGA 58.250 50.000 0.00 0.00 0.00 3.41
609 612 5.163884 GGGCTATCTTTAGTGTCGTGTTTTC 60.164 44.000 0.00 0.00 0.00 2.29
622 625 2.377628 CTGCGCCCGGGCTATCTTTA 62.378 60.000 41.01 18.37 39.32 1.85
623 626 3.757248 CTGCGCCCGGGCTATCTTT 62.757 63.158 41.01 0.00 39.32 2.52
624 627 4.241555 CTGCGCCCGGGCTATCTT 62.242 66.667 41.01 0.00 39.32 2.40
649 652 1.302511 GGAGACGTGTTGGGTGCAT 60.303 57.895 0.00 0.00 0.00 3.96
650 653 2.110213 GGAGACGTGTTGGGTGCA 59.890 61.111 0.00 0.00 0.00 4.57
668 672 0.109226 GAAACGAGAGGTCGGTCCAG 60.109 60.000 0.00 0.00 45.31 3.86
711 715 1.539124 AGAAAGGAAGAGGGGCCGT 60.539 57.895 0.00 0.00 0.00 5.68
725 729 1.293498 GAGCAGGTGAGCGGAGAAA 59.707 57.895 0.00 0.00 40.15 2.52
726 730 1.471829 TTGAGCAGGTGAGCGGAGAA 61.472 55.000 0.00 0.00 40.15 2.87
727 731 1.908299 TTGAGCAGGTGAGCGGAGA 60.908 57.895 0.00 0.00 40.15 3.71
821 830 4.742201 GCGGAGGCGAGTGAAGCA 62.742 66.667 0.00 0.00 36.08 3.91
913 923 2.612221 GGATCGAGTCGGGTTTGAGTTT 60.612 50.000 13.54 0.00 0.00 2.66
916 926 0.818296 AGGATCGAGTCGGGTTTGAG 59.182 55.000 13.54 0.00 0.00 3.02
917 927 0.815734 GAGGATCGAGTCGGGTTTGA 59.184 55.000 13.54 0.00 0.00 2.69
918 928 0.818296 AGAGGATCGAGTCGGGTTTG 59.182 55.000 13.54 0.00 42.67 2.93
919 929 0.818296 CAGAGGATCGAGTCGGGTTT 59.182 55.000 13.54 0.00 42.67 3.27
920 930 1.668101 GCAGAGGATCGAGTCGGGTT 61.668 60.000 13.54 0.00 42.67 4.11
921 931 2.122167 GCAGAGGATCGAGTCGGGT 61.122 63.158 13.54 1.46 42.67 5.28
944 954 1.885887 CGACCTTGATTTTCTTGGCCA 59.114 47.619 0.00 0.00 0.00 5.36
1431 1450 1.628340 TGAGAGAAAATGAAGCCGGGA 59.372 47.619 2.18 0.00 0.00 5.14
1441 1460 9.545105 GAACATCATCTATGACTGAGAGAAAAT 57.455 33.333 0.00 0.00 40.03 1.82
1515 1536 1.129058 GGGATCGGGGTATTGTGACT 58.871 55.000 0.00 0.00 0.00 3.41
1516 1537 1.070289 GAGGGATCGGGGTATTGTGAC 59.930 57.143 0.00 0.00 0.00 3.67
1523 1544 2.741433 CGATTGAGGGATCGGGGTA 58.259 57.895 0.00 0.00 43.82 3.69
1530 1551 2.694397 TCCTTGATCCGATTGAGGGAT 58.306 47.619 9.78 0.00 46.82 3.85
1531 1552 2.174685 TCCTTGATCCGATTGAGGGA 57.825 50.000 9.78 1.28 38.10 4.20
1533 1554 3.004106 GCATTTCCTTGATCCGATTGAGG 59.996 47.826 5.14 5.14 0.00 3.86
1534 1555 3.303593 CGCATTTCCTTGATCCGATTGAG 60.304 47.826 0.00 0.00 0.00 3.02
1535 1556 2.613595 CGCATTTCCTTGATCCGATTGA 59.386 45.455 0.00 0.00 0.00 2.57
1536 1557 2.855953 GCGCATTTCCTTGATCCGATTG 60.856 50.000 0.30 0.00 0.00 2.67
1538 1559 0.947244 GCGCATTTCCTTGATCCGAT 59.053 50.000 0.30 0.00 0.00 4.18
1539 1560 0.392327 TGCGCATTTCCTTGATCCGA 60.392 50.000 5.66 0.00 0.00 4.55
1540 1561 0.248215 GTGCGCATTTCCTTGATCCG 60.248 55.000 15.91 0.00 0.00 4.18
1541 1562 0.810648 TGTGCGCATTTCCTTGATCC 59.189 50.000 15.91 0.00 0.00 3.36
1542 1563 2.634982 TTGTGCGCATTTCCTTGATC 57.365 45.000 15.91 0.00 0.00 2.92
1544 1565 2.879002 TTTTGTGCGCATTTCCTTGA 57.121 40.000 15.91 0.00 0.00 3.02
1545 1566 2.411806 GCATTTTGTGCGCATTTCCTTG 60.412 45.455 15.91 9.06 45.23 3.61
1547 1575 1.431496 GCATTTTGTGCGCATTTCCT 58.569 45.000 15.91 0.00 45.23 3.36
1561 1589 3.712733 ACATGCCCTGGATAATTGCATTT 59.287 39.130 0.00 0.00 40.46 2.32
1563 1591 2.966915 ACATGCCCTGGATAATTGCAT 58.033 42.857 0.00 0.00 43.01 3.96
1565 1593 2.961062 AGAACATGCCCTGGATAATTGC 59.039 45.455 0.00 0.00 0.00 3.56
1568 1596 6.204852 TGATAAGAACATGCCCTGGATAAT 57.795 37.500 0.00 0.00 0.00 1.28
1571 1599 4.736611 ATGATAAGAACATGCCCTGGAT 57.263 40.909 0.00 0.00 0.00 3.41
1576 1604 6.942532 TTTCTGTATGATAAGAACATGCCC 57.057 37.500 0.00 0.00 32.26 5.36
1577 1605 9.241317 CATTTTTCTGTATGATAAGAACATGCC 57.759 33.333 0.00 0.00 32.26 4.40
1578 1606 9.793252 ACATTTTTCTGTATGATAAGAACATGC 57.207 29.630 0.00 0.00 31.87 4.06
1586 1614 9.986833 CGACATGAACATTTTTCTGTATGATAA 57.013 29.630 0.00 0.00 0.00 1.75
1587 1615 9.377312 TCGACATGAACATTTTTCTGTATGATA 57.623 29.630 0.00 0.00 0.00 2.15
1594 1622 5.505792 CGACATCGACATGAACATTTTTCTG 59.494 40.000 0.00 0.00 43.02 3.02
1596 1624 5.382303 ACGACATCGACATGAACATTTTTC 58.618 37.500 8.54 0.00 43.02 2.29
1603 1631 4.798907 AGTGATAACGACATCGACATGAAC 59.201 41.667 8.54 0.00 43.02 3.18
1605 1633 4.142469 ACAGTGATAACGACATCGACATGA 60.142 41.667 8.54 0.00 43.02 3.07
1606 1634 4.027377 CACAGTGATAACGACATCGACATG 60.027 45.833 8.54 0.00 43.02 3.21
1607 1635 4.105486 CACAGTGATAACGACATCGACAT 58.895 43.478 8.54 0.31 43.02 3.06
1608 1636 3.498082 CACAGTGATAACGACATCGACA 58.502 45.455 8.54 0.40 43.02 4.35
1609 1637 2.279136 GCACAGTGATAACGACATCGAC 59.721 50.000 8.54 0.00 43.02 4.20
1610 1638 2.163613 AGCACAGTGATAACGACATCGA 59.836 45.455 8.54 0.00 43.02 3.59
1611 1639 2.279921 CAGCACAGTGATAACGACATCG 59.720 50.000 4.15 0.00 46.33 3.84
1612 1640 3.061295 CACAGCACAGTGATAACGACATC 59.939 47.826 4.15 0.00 42.05 3.06
1774 1802 8.189119 AGAATGATCAGACCTACTCCTTAATC 57.811 38.462 0.09 0.00 0.00 1.75
1996 2029 1.227089 CGGATCAAGAGCGAGGTGG 60.227 63.158 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.