Multiple sequence alignment - TraesCS5A01G080300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G080300 chr5A 100.000 4363 0 0 1 4363 100621910 100617548 0.000000e+00 8058
1 TraesCS5A01G080300 chr5D 96.923 3217 79 11 1152 4363 100035812 100032611 0.000000e+00 5374
2 TraesCS5A01G080300 chr5D 93.233 532 33 3 1 530 100037169 100036639 0.000000e+00 780
3 TraesCS5A01G080300 chr5D 85.000 140 14 5 618 752 62480931 62480794 7.610000e-28 135
4 TraesCS5A01G080300 chr5B 96.524 3222 65 16 1158 4362 108797477 108794286 0.000000e+00 5286
5 TraesCS5A01G080300 chr5B 91.057 123 9 1 618 738 487225192 487225314 9.710000e-37 165
6 TraesCS5A01G080300 chr2D 88.590 631 68 4 1 630 630306246 630305619 0.000000e+00 763
7 TraesCS5A01G080300 chr2D 87.415 588 74 0 1 588 31977452 31976865 0.000000e+00 676
8 TraesCS5A01G080300 chr7D 87.678 633 75 2 1 630 412746519 412747151 0.000000e+00 734
9 TraesCS5A01G080300 chr7D 87.156 545 69 1 87 630 412753482 412754026 6.200000e-173 617
10 TraesCS5A01G080300 chr7D 86.861 137 15 2 618 752 412755800 412755935 2.720000e-32 150
11 TraesCS5A01G080300 chr6D 86.867 632 81 2 1 630 317407662 317408293 0.000000e+00 706
12 TraesCS5A01G080300 chr3A 86.667 630 79 4 1 630 362196536 362197160 0.000000e+00 693
13 TraesCS5A01G080300 chr4D 86.212 631 83 3 1 630 37943499 37942872 0.000000e+00 680
14 TraesCS5A01G080300 chr4D 85.401 137 18 1 618 752 37942821 37942685 1.640000e-29 141
15 TraesCS5A01G080300 chr3B 85.714 630 88 2 1 630 372854077 372854704 0.000000e+00 664
16 TraesCS5A01G080300 chr7A 88.372 129 13 1 618 744 22789449 22789577 2.100000e-33 154
17 TraesCS5A01G080300 chr7A 83.333 114 19 0 1329 1442 127607344 127607457 5.970000e-19 106
18 TraesCS5A01G080300 chr2B 89.167 120 11 1 618 735 98470031 98469912 9.780000e-32 148
19 TraesCS5A01G080300 chr2B 88.430 121 11 2 626 744 98735485 98735366 4.550000e-30 143
20 TraesCS5A01G080300 chr4B 80.420 143 26 2 1329 1470 186609237 186609096 1.660000e-19 108
21 TraesCS5A01G080300 chr7B 86.170 94 12 1 1329 1422 87174293 87174201 2.780000e-17 100


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G080300 chr5A 100617548 100621910 4362 True 8058.0 8058 100.0000 1 4363 1 chr5A.!!$R1 4362
1 TraesCS5A01G080300 chr5D 100032611 100037169 4558 True 3077.0 5374 95.0780 1 4363 2 chr5D.!!$R2 4362
2 TraesCS5A01G080300 chr5B 108794286 108797477 3191 True 5286.0 5286 96.5240 1158 4362 1 chr5B.!!$R1 3204
3 TraesCS5A01G080300 chr2D 630305619 630306246 627 True 763.0 763 88.5900 1 630 1 chr2D.!!$R2 629
4 TraesCS5A01G080300 chr2D 31976865 31977452 587 True 676.0 676 87.4150 1 588 1 chr2D.!!$R1 587
5 TraesCS5A01G080300 chr7D 412746519 412747151 632 False 734.0 734 87.6780 1 630 1 chr7D.!!$F1 629
6 TraesCS5A01G080300 chr7D 412753482 412755935 2453 False 383.5 617 87.0085 87 752 2 chr7D.!!$F2 665
7 TraesCS5A01G080300 chr6D 317407662 317408293 631 False 706.0 706 86.8670 1 630 1 chr6D.!!$F1 629
8 TraesCS5A01G080300 chr3A 362196536 362197160 624 False 693.0 693 86.6670 1 630 1 chr3A.!!$F1 629
9 TraesCS5A01G080300 chr4D 37942685 37943499 814 True 410.5 680 85.8065 1 752 2 chr4D.!!$R1 751
10 TraesCS5A01G080300 chr3B 372854077 372854704 627 False 664.0 664 85.7140 1 630 1 chr3B.!!$F1 629

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
671 2500 0.179018 AGAGCCACAAAGTCCACACC 60.179 55.000 0.00 0.0 0.0 4.16 F
1112 2949 0.028955 ATTTCTCCCCCTACCTCCCC 60.029 60.000 0.00 0.0 0.0 4.81 F
1210 3213 0.105607 GAATACCTCGACCTCCCCCT 60.106 60.000 0.00 0.0 0.0 4.79 F
2088 4091 1.434696 GCGGTGGCCAAGAATGATG 59.565 57.895 7.24 0.0 0.0 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1792 3795 0.897401 TGCGTGGCCATTGAATCCAA 60.897 50.000 9.72 0.00 36.61 3.53 R
2279 4282 1.252904 GGCCCTCTGCAAAGCAATGA 61.253 55.000 0.00 0.00 43.89 2.57 R
2909 4912 2.019951 CTCCCGAAACCGTGTCACG 61.020 63.158 18.54 18.54 42.11 4.35 R
3479 5483 0.458889 CATCGCACAAATTGGCCCTG 60.459 55.000 0.00 0.00 0.00 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
261 265 4.947388 ACATTTTATCGCCAAAGAGCCTAA 59.053 37.500 0.00 0.00 0.00 2.69
291 296 1.145738 AGTGGAATCCCTGCAAACTGT 59.854 47.619 0.00 0.00 0.00 3.55
342 347 2.601804 CACGACACCATCAACACGATA 58.398 47.619 0.00 0.00 31.20 2.92
421 427 1.755959 ACAGGTGCATGTTGCTTCAAA 59.244 42.857 0.00 0.00 45.31 2.69
441 447 1.884579 AGGTGTGCAAATCTGAAGCTG 59.115 47.619 0.00 0.00 0.00 4.24
475 481 7.617041 ATTCTTGACAAACTGATTAGTAGCC 57.383 36.000 0.00 0.00 35.69 3.93
476 482 5.168569 TCTTGACAAACTGATTAGTAGCCG 58.831 41.667 0.00 0.00 35.69 5.52
486 492 0.546122 TTAGTAGCCGACGACCCCTA 59.454 55.000 0.00 0.00 0.00 3.53
507 513 7.170965 CCCTAAAATACATGCTCATGGATAGT 58.829 38.462 13.69 5.52 41.36 2.12
527 566 2.226437 GTCTTTCTTCGAGCATGCCAAA 59.774 45.455 15.66 5.44 0.00 3.28
528 567 3.084039 TCTTTCTTCGAGCATGCCAAAT 58.916 40.909 15.66 0.00 0.00 2.32
529 568 3.127548 TCTTTCTTCGAGCATGCCAAATC 59.872 43.478 15.66 4.12 0.00 2.17
530 569 1.009078 TCTTCGAGCATGCCAAATCG 58.991 50.000 15.66 17.10 36.54 3.34
531 570 0.590732 CTTCGAGCATGCCAAATCGC 60.591 55.000 19.02 0.00 35.23 4.58
532 571 1.992233 TTCGAGCATGCCAAATCGCC 61.992 55.000 19.02 0.00 35.23 5.54
533 572 2.475466 CGAGCATGCCAAATCGCCT 61.475 57.895 15.66 0.00 0.00 5.52
534 573 1.159713 CGAGCATGCCAAATCGCCTA 61.160 55.000 15.66 0.00 0.00 3.93
535 574 1.242076 GAGCATGCCAAATCGCCTAT 58.758 50.000 15.66 0.00 0.00 2.57
536 575 2.426522 GAGCATGCCAAATCGCCTATA 58.573 47.619 15.66 0.00 0.00 1.31
537 576 2.417933 GAGCATGCCAAATCGCCTATAG 59.582 50.000 15.66 0.00 0.00 1.31
538 577 2.154462 GCATGCCAAATCGCCTATAGT 58.846 47.619 6.36 0.00 0.00 2.12
539 578 2.095567 GCATGCCAAATCGCCTATAGTG 60.096 50.000 6.36 0.00 0.00 2.74
540 579 3.141398 CATGCCAAATCGCCTATAGTGT 58.859 45.455 0.00 0.00 0.00 3.55
541 580 3.275617 TGCCAAATCGCCTATAGTGTT 57.724 42.857 0.00 0.00 0.00 3.32
542 581 4.409718 TGCCAAATCGCCTATAGTGTTA 57.590 40.909 0.00 0.00 0.00 2.41
543 582 4.124238 TGCCAAATCGCCTATAGTGTTAC 58.876 43.478 0.00 0.00 0.00 2.50
544 583 4.124238 GCCAAATCGCCTATAGTGTTACA 58.876 43.478 0.00 0.00 0.00 2.41
545 584 4.573201 GCCAAATCGCCTATAGTGTTACAA 59.427 41.667 0.00 0.00 0.00 2.41
546 585 5.277345 GCCAAATCGCCTATAGTGTTACAAG 60.277 44.000 0.00 0.00 0.00 3.16
547 586 5.815740 CCAAATCGCCTATAGTGTTACAAGT 59.184 40.000 0.00 0.00 0.00 3.16
548 587 6.982141 CCAAATCGCCTATAGTGTTACAAGTA 59.018 38.462 0.00 0.00 0.00 2.24
549 588 7.656137 CCAAATCGCCTATAGTGTTACAAGTAT 59.344 37.037 0.00 0.00 0.00 2.12
550 589 8.700644 CAAATCGCCTATAGTGTTACAAGTATC 58.299 37.037 0.00 0.00 0.00 2.24
551 590 7.762588 ATCGCCTATAGTGTTACAAGTATCT 57.237 36.000 0.00 0.00 0.00 1.98
552 591 7.578310 TCGCCTATAGTGTTACAAGTATCTT 57.422 36.000 0.00 0.00 0.00 2.40
553 592 7.423199 TCGCCTATAGTGTTACAAGTATCTTG 58.577 38.462 7.78 7.78 0.00 3.02
554 593 7.283807 TCGCCTATAGTGTTACAAGTATCTTGA 59.716 37.037 15.04 0.00 0.00 3.02
555 594 8.082852 CGCCTATAGTGTTACAAGTATCTTGAT 58.917 37.037 15.04 3.94 0.00 2.57
556 595 9.197694 GCCTATAGTGTTACAAGTATCTTGATG 57.802 37.037 15.04 0.00 0.00 3.07
571 611 3.628942 TCTTGATGAAATTCTCATGCGGG 59.371 43.478 7.55 0.00 45.23 6.13
575 615 5.375773 TGATGAAATTCTCATGCGGGATAA 58.624 37.500 7.55 0.00 45.23 1.75
580 620 6.547141 TGAAATTCTCATGCGGGATAAAATCT 59.453 34.615 0.00 0.00 0.00 2.40
671 2500 0.179018 AGAGCCACAAAGTCCACACC 60.179 55.000 0.00 0.00 0.00 4.16
672 2501 1.507141 GAGCCACAAAGTCCACACCG 61.507 60.000 0.00 0.00 0.00 4.94
681 2512 4.039488 ACAAAGTCCACACCGTGATTACTA 59.961 41.667 5.28 0.00 35.23 1.82
682 2513 5.175859 CAAAGTCCACACCGTGATTACTAT 58.824 41.667 5.28 0.00 35.23 2.12
692 2523 4.825634 ACCGTGATTACTATCATCTTCCGA 59.174 41.667 0.00 0.00 42.49 4.55
715 2546 4.260985 TGTTTGAGCAAGTCTGAAGTTGA 58.739 39.130 5.44 0.00 37.94 3.18
727 2558 5.128827 AGTCTGAAGTTGACAAGGACTGTTA 59.871 40.000 0.00 0.00 38.84 2.41
738 2569 1.104630 GGACTGTTACGCTAGCCTCT 58.895 55.000 9.66 0.00 0.00 3.69
740 2571 2.033174 GGACTGTTACGCTAGCCTCTAC 59.967 54.545 9.66 3.17 0.00 2.59
783 2618 6.995091 AGTTAATGAATGATGTTAGCCCTCTC 59.005 38.462 0.00 0.00 0.00 3.20
786 2621 3.643320 TGAATGATGTTAGCCCTCTCGAT 59.357 43.478 0.00 0.00 0.00 3.59
794 2629 2.913060 CCCTCTCGATCCGGACCC 60.913 72.222 6.12 0.00 0.00 4.46
814 2649 0.812811 GAATCCGGGCCGAACCTAAC 60.813 60.000 30.79 8.03 39.10 2.34
816 2651 4.478371 CCGGGCCGAACCTAACCC 62.478 72.222 30.79 0.00 39.10 4.11
965 2802 3.820843 GGTGGCCAATCCCCCGAT 61.821 66.667 7.24 0.00 0.00 4.18
966 2803 2.203351 GTGGCCAATCCCCCGATC 60.203 66.667 7.24 0.00 0.00 3.69
967 2804 3.498071 TGGCCAATCCCCCGATCC 61.498 66.667 0.61 0.00 0.00 3.36
968 2805 4.286065 GGCCAATCCCCCGATCCC 62.286 72.222 0.00 0.00 0.00 3.85
969 2806 3.498071 GCCAATCCCCCGATCCCA 61.498 66.667 0.00 0.00 0.00 4.37
970 2807 2.515901 CCAATCCCCCGATCCCAC 59.484 66.667 0.00 0.00 0.00 4.61
971 2808 2.515901 CAATCCCCCGATCCCACC 59.484 66.667 0.00 0.00 0.00 4.61
972 2809 2.776963 AATCCCCCGATCCCACCC 60.777 66.667 0.00 0.00 0.00 4.61
973 2810 3.362946 AATCCCCCGATCCCACCCT 62.363 63.158 0.00 0.00 0.00 4.34
974 2811 4.815973 TCCCCCGATCCCACCCTG 62.816 72.222 0.00 0.00 0.00 4.45
994 2831 3.169198 CGCCTTCGCAGAACCTTC 58.831 61.111 0.00 0.00 45.90 3.46
995 2832 2.391389 CGCCTTCGCAGAACCTTCC 61.391 63.158 0.00 0.00 45.90 3.46
996 2833 2.041115 GCCTTCGCAGAACCTTCCC 61.041 63.158 0.00 0.00 45.90 3.97
997 2834 1.741770 CCTTCGCAGAACCTTCCCG 60.742 63.158 0.00 0.00 45.90 5.14
998 2835 2.358247 TTCGCAGAACCTTCCCGC 60.358 61.111 0.00 0.00 45.90 6.13
999 2836 2.788191 CTTCGCAGAACCTTCCCGCT 62.788 60.000 0.00 0.00 45.90 5.52
1000 2837 2.781595 TTCGCAGAACCTTCCCGCTC 62.782 60.000 0.00 0.00 45.90 5.03
1001 2838 2.436824 GCAGAACCTTCCCGCTCC 60.437 66.667 0.00 0.00 0.00 4.70
1002 2839 2.269241 CAGAACCTTCCCGCTCCC 59.731 66.667 0.00 0.00 0.00 4.30
1003 2840 3.009714 AGAACCTTCCCGCTCCCC 61.010 66.667 0.00 0.00 0.00 4.81
1004 2841 4.468689 GAACCTTCCCGCTCCCCG 62.469 72.222 0.00 0.00 0.00 5.73
1013 2850 3.458163 CGCTCCCCGCCTCTACAA 61.458 66.667 0.00 0.00 34.21 2.41
1014 2851 2.987125 GCTCCCCGCCTCTACAAA 59.013 61.111 0.00 0.00 0.00 2.83
1015 2852 1.298667 GCTCCCCGCCTCTACAAAA 59.701 57.895 0.00 0.00 0.00 2.44
1016 2853 1.025113 GCTCCCCGCCTCTACAAAAC 61.025 60.000 0.00 0.00 0.00 2.43
1017 2854 0.392595 CTCCCCGCCTCTACAAAACC 60.393 60.000 0.00 0.00 0.00 3.27
1018 2855 1.128809 TCCCCGCCTCTACAAAACCA 61.129 55.000 0.00 0.00 0.00 3.67
1019 2856 0.958876 CCCCGCCTCTACAAAACCAC 60.959 60.000 0.00 0.00 0.00 4.16
1020 2857 0.958876 CCCGCCTCTACAAAACCACC 60.959 60.000 0.00 0.00 0.00 4.61
1021 2858 0.250553 CCGCCTCTACAAAACCACCA 60.251 55.000 0.00 0.00 0.00 4.17
1022 2859 1.600023 CGCCTCTACAAAACCACCAA 58.400 50.000 0.00 0.00 0.00 3.67
1023 2860 1.950909 CGCCTCTACAAAACCACCAAA 59.049 47.619 0.00 0.00 0.00 3.28
1024 2861 2.359531 CGCCTCTACAAAACCACCAAAA 59.640 45.455 0.00 0.00 0.00 2.44
1025 2862 3.713288 GCCTCTACAAAACCACCAAAAC 58.287 45.455 0.00 0.00 0.00 2.43
1026 2863 3.491964 GCCTCTACAAAACCACCAAAACC 60.492 47.826 0.00 0.00 0.00 3.27
1027 2864 3.069016 CCTCTACAAAACCACCAAAACCC 59.931 47.826 0.00 0.00 0.00 4.11
1028 2865 3.032459 TCTACAAAACCACCAAAACCCC 58.968 45.455 0.00 0.00 0.00 4.95
1029 2866 0.913205 ACAAAACCACCAAAACCCCC 59.087 50.000 0.00 0.00 0.00 5.40
1030 2867 0.912486 CAAAACCACCAAAACCCCCA 59.088 50.000 0.00 0.00 0.00 4.96
1031 2868 0.913205 AAAACCACCAAAACCCCCAC 59.087 50.000 0.00 0.00 0.00 4.61
1032 2869 0.043485 AAACCACCAAAACCCCCACT 59.957 50.000 0.00 0.00 0.00 4.00
1033 2870 0.043485 AACCACCAAAACCCCCACTT 59.957 50.000 0.00 0.00 0.00 3.16
1034 2871 0.689412 ACCACCAAAACCCCCACTTG 60.689 55.000 0.00 0.00 0.00 3.16
1035 2872 1.445518 CACCAAAACCCCCACTTGC 59.554 57.895 0.00 0.00 0.00 4.01
1036 2873 1.764454 ACCAAAACCCCCACTTGCC 60.764 57.895 0.00 0.00 0.00 4.52
1037 2874 2.515979 CCAAAACCCCCACTTGCCC 61.516 63.158 0.00 0.00 0.00 5.36
1038 2875 1.459348 CAAAACCCCCACTTGCCCT 60.459 57.895 0.00 0.00 0.00 5.19
1039 2876 1.152333 AAAACCCCCACTTGCCCTC 60.152 57.895 0.00 0.00 0.00 4.30
1040 2877 1.664956 AAAACCCCCACTTGCCCTCT 61.665 55.000 0.00 0.00 0.00 3.69
1041 2878 2.081585 AAACCCCCACTTGCCCTCTC 62.082 60.000 0.00 0.00 0.00 3.20
1042 2879 3.732849 CCCCCACTTGCCCTCTCC 61.733 72.222 0.00 0.00 0.00 3.71
1043 2880 3.732849 CCCCACTTGCCCTCTCCC 61.733 72.222 0.00 0.00 0.00 4.30
1044 2881 2.935481 CCCACTTGCCCTCTCCCA 60.935 66.667 0.00 0.00 0.00 4.37
1045 2882 2.352805 CCACTTGCCCTCTCCCAC 59.647 66.667 0.00 0.00 0.00 4.61
1046 2883 2.352805 CACTTGCCCTCTCCCACC 59.647 66.667 0.00 0.00 0.00 4.61
1047 2884 2.208349 ACTTGCCCTCTCCCACCT 59.792 61.111 0.00 0.00 0.00 4.00
1048 2885 1.920835 ACTTGCCCTCTCCCACCTC 60.921 63.158 0.00 0.00 0.00 3.85
1049 2886 3.003173 TTGCCCTCTCCCACCTCG 61.003 66.667 0.00 0.00 0.00 4.63
1073 2910 3.883549 GCCATGGGCTCCTCCTCC 61.884 72.222 15.13 0.00 46.69 4.30
1074 2911 2.040043 CCATGGGCTCCTCCTCCT 60.040 66.667 2.85 0.00 34.39 3.69
1075 2912 1.237163 CCATGGGCTCCTCCTCCTA 59.763 63.158 2.85 0.00 34.39 2.94
1076 2913 1.124477 CCATGGGCTCCTCCTCCTAC 61.124 65.000 2.85 0.00 34.39 3.18
1077 2914 1.124477 CATGGGCTCCTCCTCCTACC 61.124 65.000 0.00 0.00 34.39 3.18
1078 2915 1.307976 ATGGGCTCCTCCTCCTACCT 61.308 60.000 0.00 0.00 34.39 3.08
1079 2916 1.152419 GGGCTCCTCCTCCTACCTC 60.152 68.421 0.00 0.00 34.39 3.85
1080 2917 1.152419 GGCTCCTCCTCCTACCTCC 60.152 68.421 0.00 0.00 0.00 4.30
1081 2918 1.152419 GCTCCTCCTCCTACCTCCC 60.152 68.421 0.00 0.00 0.00 4.30
1082 2919 1.544703 CTCCTCCTCCTACCTCCCC 59.455 68.421 0.00 0.00 0.00 4.81
1083 2920 2.019272 TCCTCCTCCTACCTCCCCC 61.019 68.421 0.00 0.00 0.00 5.40
1084 2921 2.333462 CCTCCTCCTACCTCCCCCA 61.333 68.421 0.00 0.00 0.00 4.96
1085 2922 1.075151 CTCCTCCTACCTCCCCCAC 60.075 68.421 0.00 0.00 0.00 4.61
1086 2923 2.444140 CCTCCTACCTCCCCCACG 60.444 72.222 0.00 0.00 0.00 4.94
1087 2924 2.687902 CTCCTACCTCCCCCACGA 59.312 66.667 0.00 0.00 0.00 4.35
1088 2925 1.757340 CTCCTACCTCCCCCACGAC 60.757 68.421 0.00 0.00 0.00 4.34
1089 2926 2.038329 CCTACCTCCCCCACGACA 59.962 66.667 0.00 0.00 0.00 4.35
1090 2927 1.382695 CCTACCTCCCCCACGACAT 60.383 63.158 0.00 0.00 0.00 3.06
1091 2928 1.686325 CCTACCTCCCCCACGACATG 61.686 65.000 0.00 0.00 0.00 3.21
1102 2939 1.668419 CACGACATGGATTTCTCCCC 58.332 55.000 0.00 0.00 41.29 4.81
1103 2940 0.546598 ACGACATGGATTTCTCCCCC 59.453 55.000 0.00 0.00 41.29 5.40
1104 2941 0.839946 CGACATGGATTTCTCCCCCT 59.160 55.000 0.00 0.00 41.29 4.79
1105 2942 2.047061 CGACATGGATTTCTCCCCCTA 58.953 52.381 0.00 0.00 41.29 3.53
1106 2943 2.224305 CGACATGGATTTCTCCCCCTAC 60.224 54.545 0.00 0.00 41.29 3.18
1107 2944 2.106684 GACATGGATTTCTCCCCCTACC 59.893 54.545 0.00 0.00 41.29 3.18
1108 2945 2.294536 ACATGGATTTCTCCCCCTACCT 60.295 50.000 0.00 0.00 41.29 3.08
1109 2946 2.191981 TGGATTTCTCCCCCTACCTC 57.808 55.000 0.00 0.00 41.29 3.85
1110 2947 1.345112 TGGATTTCTCCCCCTACCTCC 60.345 57.143 0.00 0.00 41.29 4.30
1111 2948 1.436326 GATTTCTCCCCCTACCTCCC 58.564 60.000 0.00 0.00 0.00 4.30
1112 2949 0.028955 ATTTCTCCCCCTACCTCCCC 60.029 60.000 0.00 0.00 0.00 4.81
1113 2950 2.540842 TTTCTCCCCCTACCTCCCCG 62.541 65.000 0.00 0.00 0.00 5.73
1120 2957 2.838225 CTACCTCCCCGCCGACAT 60.838 66.667 0.00 0.00 0.00 3.06
1121 2958 3.151710 TACCTCCCCGCCGACATG 61.152 66.667 0.00 0.00 0.00 3.21
1210 3213 0.105607 GAATACCTCGACCTCCCCCT 60.106 60.000 0.00 0.00 0.00 4.79
2088 4091 1.434696 GCGGTGGCCAAGAATGATG 59.565 57.895 7.24 0.00 0.00 3.07
2096 4099 2.114670 CAAGAATGATGGCGGCGGT 61.115 57.895 9.78 0.00 0.00 5.68
2291 4294 1.878070 CCTCGCTCATTGCTTTGCA 59.122 52.632 0.00 0.00 40.11 4.08
2658 4661 1.679944 GCAGGCTCAAGAAGTATGCCA 60.680 52.381 0.00 0.00 45.42 4.92
2909 4912 2.686915 CTCATTCAGTGCCCCATTCTTC 59.313 50.000 0.00 0.00 0.00 2.87
2945 4948 4.342359 GGGAGGTTCTGTTCTACTACTCA 58.658 47.826 0.00 0.00 0.00 3.41
3370 5373 2.844946 TGTCTGTGTGTTGTGTATGGG 58.155 47.619 0.00 0.00 0.00 4.00
3539 5543 4.080356 GGGTAGCCCAAGATATATGCATGA 60.080 45.833 10.16 0.00 44.65 3.07
3579 5583 2.889045 AGATGTTTGCAGTCATGTTGCT 59.111 40.909 20.12 4.48 42.02 3.91
3649 5655 5.047847 GGATGGATGATGTTTGCTGAATTG 58.952 41.667 0.00 0.00 0.00 2.32
4078 6096 0.334676 TGCCCCCTAGACAAAATGGG 59.665 55.000 0.00 0.00 39.37 4.00
4181 6202 3.058570 TGATTTGATTTGTGACGGTTCCG 60.059 43.478 9.81 9.81 0.00 4.30
4337 6358 2.907910 AGCGATGCTGAAACAACATC 57.092 45.000 0.00 0.00 37.57 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
198 202 5.396772 CCAGTATCATTGGAGGCTTTCACTA 60.397 44.000 0.00 0.00 37.96 2.74
291 296 3.338249 GCAATGGAAGAGACTTACAGCA 58.662 45.455 2.92 0.00 0.00 4.41
302 307 1.452110 CCACATGACGCAATGGAAGA 58.548 50.000 0.00 0.00 33.80 2.87
421 427 1.884579 CAGCTTCAGATTTGCACACCT 59.115 47.619 0.00 0.00 0.00 4.00
475 481 2.542595 GCATGTATTTTAGGGGTCGTCG 59.457 50.000 0.00 0.00 0.00 5.12
476 482 3.805207 AGCATGTATTTTAGGGGTCGTC 58.195 45.455 0.00 0.00 0.00 4.20
486 492 8.757982 AAAGACTATCCATGAGCATGTATTTT 57.242 30.769 9.39 0.00 37.11 1.82
507 513 2.183478 TTGGCATGCTCGAAGAAAGA 57.817 45.000 18.92 0.00 34.09 2.52
527 566 7.762588 AGATACTTGTAACACTATAGGCGAT 57.237 36.000 4.43 0.00 0.00 4.58
528 567 7.283807 TCAAGATACTTGTAACACTATAGGCGA 59.716 37.037 4.43 0.00 0.00 5.54
529 568 7.423199 TCAAGATACTTGTAACACTATAGGCG 58.577 38.462 4.43 0.00 0.00 5.52
530 569 9.197694 CATCAAGATACTTGTAACACTATAGGC 57.802 37.037 4.43 0.00 0.00 3.93
542 581 8.404000 GCATGAGAATTTCATCAAGATACTTGT 58.596 33.333 0.00 0.00 44.76 3.16
543 582 7.586664 CGCATGAGAATTTCATCAAGATACTTG 59.413 37.037 0.00 5.29 44.76 3.16
544 583 7.255035 CCGCATGAGAATTTCATCAAGATACTT 60.255 37.037 0.00 0.00 44.76 2.24
545 584 6.204301 CCGCATGAGAATTTCATCAAGATACT 59.796 38.462 0.00 0.00 44.76 2.12
546 585 6.369005 CCGCATGAGAATTTCATCAAGATAC 58.631 40.000 0.00 0.00 44.76 2.24
547 586 5.471116 CCCGCATGAGAATTTCATCAAGATA 59.529 40.000 0.00 0.00 44.76 1.98
548 587 4.277672 CCCGCATGAGAATTTCATCAAGAT 59.722 41.667 0.00 0.00 44.76 2.40
549 588 3.628942 CCCGCATGAGAATTTCATCAAGA 59.371 43.478 0.00 0.00 44.76 3.02
550 589 3.628942 TCCCGCATGAGAATTTCATCAAG 59.371 43.478 0.00 0.00 44.76 3.02
551 590 3.619419 TCCCGCATGAGAATTTCATCAA 58.381 40.909 0.00 0.00 44.76 2.57
552 591 3.280197 TCCCGCATGAGAATTTCATCA 57.720 42.857 0.00 0.77 44.76 3.07
553 592 5.947228 TTATCCCGCATGAGAATTTCATC 57.053 39.130 0.00 0.00 44.76 2.92
555 594 6.547141 AGATTTTATCCCGCATGAGAATTTCA 59.453 34.615 0.00 0.00 40.85 2.69
556 595 6.974965 AGATTTTATCCCGCATGAGAATTTC 58.025 36.000 0.00 0.00 0.00 2.17
557 596 6.966534 AGATTTTATCCCGCATGAGAATTT 57.033 33.333 0.00 0.00 0.00 1.82
558 597 8.641498 AATAGATTTTATCCCGCATGAGAATT 57.359 30.769 0.00 0.00 0.00 2.17
575 615 9.654663 ACGCTTAGTTTTCTCACTAATAGATTT 57.345 29.630 0.00 0.00 38.34 2.17
692 2523 4.883585 TCAACTTCAGACTTGCTCAAACAT 59.116 37.500 0.00 0.00 0.00 2.71
715 2546 1.067071 GGCTAGCGTAACAGTCCTTGT 60.067 52.381 9.00 0.00 43.45 3.16
727 2558 4.473477 AAAAATCTGTAGAGGCTAGCGT 57.527 40.909 10.22 10.22 0.00 5.07
761 2592 5.304357 TCGAGAGGGCTAACATCATTCATTA 59.696 40.000 0.00 0.00 30.77 1.90
767 2598 2.564947 GGATCGAGAGGGCTAACATCAT 59.435 50.000 0.00 0.00 30.77 2.45
768 2599 1.964223 GGATCGAGAGGGCTAACATCA 59.036 52.381 0.00 0.00 30.77 3.07
769 2600 1.068194 CGGATCGAGAGGGCTAACATC 60.068 57.143 0.00 0.00 0.00 3.06
770 2601 0.962489 CGGATCGAGAGGGCTAACAT 59.038 55.000 0.00 0.00 0.00 2.71
772 2603 0.822532 TCCGGATCGAGAGGGCTAAC 60.823 60.000 0.00 0.00 0.00 2.34
794 2629 2.300850 TTAGGTTCGGCCCGGATTCG 62.301 60.000 0.73 3.53 38.26 3.34
842 2677 3.726517 CAGTGTTTCTGCGGCGGG 61.727 66.667 9.78 0.00 37.36 6.13
858 2693 2.031420 CGCTAGTCGACGGAATATTCCA 60.031 50.000 29.54 11.18 43.65 3.53
872 2707 1.385756 GGAGGAGGGACACGCTAGTC 61.386 65.000 0.00 0.00 37.80 2.59
875 2710 2.043248 GGGAGGAGGGACACGCTA 60.043 66.667 0.00 0.00 0.00 4.26
977 2814 2.391389 GGAAGGTTCTGCGAAGGCG 61.391 63.158 0.00 0.00 44.10 5.52
978 2815 2.041115 GGGAAGGTTCTGCGAAGGC 61.041 63.158 0.00 0.00 40.52 4.35
979 2816 1.741770 CGGGAAGGTTCTGCGAAGG 60.742 63.158 0.00 0.00 0.00 3.46
980 2817 2.391389 GCGGGAAGGTTCTGCGAAG 61.391 63.158 0.00 0.00 0.00 3.79
981 2818 2.358247 GCGGGAAGGTTCTGCGAA 60.358 61.111 0.00 0.00 0.00 4.70
982 2819 3.296709 GAGCGGGAAGGTTCTGCGA 62.297 63.158 0.00 0.00 35.01 5.10
983 2820 2.815647 GAGCGGGAAGGTTCTGCG 60.816 66.667 0.00 0.00 35.01 5.18
984 2821 2.436824 GGAGCGGGAAGGTTCTGC 60.437 66.667 0.00 0.00 0.00 4.26
985 2822 2.269241 GGGAGCGGGAAGGTTCTG 59.731 66.667 0.00 0.00 0.00 3.02
986 2823 3.009714 GGGGAGCGGGAAGGTTCT 61.010 66.667 0.00 0.00 0.00 3.01
987 2824 4.468689 CGGGGAGCGGGAAGGTTC 62.469 72.222 0.00 0.00 0.00 3.62
998 2835 0.392595 GGTTTTGTAGAGGCGGGGAG 60.393 60.000 0.00 0.00 0.00 4.30
999 2836 1.128809 TGGTTTTGTAGAGGCGGGGA 61.129 55.000 0.00 0.00 0.00 4.81
1000 2837 0.958876 GTGGTTTTGTAGAGGCGGGG 60.959 60.000 0.00 0.00 0.00 5.73
1001 2838 0.958876 GGTGGTTTTGTAGAGGCGGG 60.959 60.000 0.00 0.00 0.00 6.13
1002 2839 0.250553 TGGTGGTTTTGTAGAGGCGG 60.251 55.000 0.00 0.00 0.00 6.13
1003 2840 1.600023 TTGGTGGTTTTGTAGAGGCG 58.400 50.000 0.00 0.00 0.00 5.52
1004 2841 3.491964 GGTTTTGGTGGTTTTGTAGAGGC 60.492 47.826 0.00 0.00 0.00 4.70
1005 2842 3.069016 GGGTTTTGGTGGTTTTGTAGAGG 59.931 47.826 0.00 0.00 0.00 3.69
1006 2843 3.069016 GGGGTTTTGGTGGTTTTGTAGAG 59.931 47.826 0.00 0.00 0.00 2.43
1007 2844 3.032459 GGGGTTTTGGTGGTTTTGTAGA 58.968 45.455 0.00 0.00 0.00 2.59
1008 2845 2.103432 GGGGGTTTTGGTGGTTTTGTAG 59.897 50.000 0.00 0.00 0.00 2.74
1009 2846 2.117051 GGGGGTTTTGGTGGTTTTGTA 58.883 47.619 0.00 0.00 0.00 2.41
1010 2847 0.913205 GGGGGTTTTGGTGGTTTTGT 59.087 50.000 0.00 0.00 0.00 2.83
1011 2848 0.912486 TGGGGGTTTTGGTGGTTTTG 59.088 50.000 0.00 0.00 0.00 2.44
1012 2849 0.913205 GTGGGGGTTTTGGTGGTTTT 59.087 50.000 0.00 0.00 0.00 2.43
1013 2850 0.043485 AGTGGGGGTTTTGGTGGTTT 59.957 50.000 0.00 0.00 0.00 3.27
1014 2851 0.043485 AAGTGGGGGTTTTGGTGGTT 59.957 50.000 0.00 0.00 0.00 3.67
1015 2852 0.689412 CAAGTGGGGGTTTTGGTGGT 60.689 55.000 0.00 0.00 0.00 4.16
1016 2853 2.038814 GCAAGTGGGGGTTTTGGTGG 62.039 60.000 0.00 0.00 0.00 4.61
1017 2854 1.445518 GCAAGTGGGGGTTTTGGTG 59.554 57.895 0.00 0.00 0.00 4.17
1018 2855 1.764454 GGCAAGTGGGGGTTTTGGT 60.764 57.895 0.00 0.00 0.00 3.67
1019 2856 2.515979 GGGCAAGTGGGGGTTTTGG 61.516 63.158 0.00 0.00 0.00 3.28
1020 2857 1.459348 AGGGCAAGTGGGGGTTTTG 60.459 57.895 0.00 0.00 0.00 2.44
1021 2858 1.152333 GAGGGCAAGTGGGGGTTTT 60.152 57.895 0.00 0.00 0.00 2.43
1022 2859 2.081585 GAGAGGGCAAGTGGGGGTTT 62.082 60.000 0.00 0.00 0.00 3.27
1023 2860 2.452491 AGAGGGCAAGTGGGGGTT 60.452 61.111 0.00 0.00 0.00 4.11
1024 2861 2.936032 GAGAGGGCAAGTGGGGGT 60.936 66.667 0.00 0.00 0.00 4.95
1025 2862 3.732849 GGAGAGGGCAAGTGGGGG 61.733 72.222 0.00 0.00 0.00 5.40
1026 2863 3.732849 GGGAGAGGGCAAGTGGGG 61.733 72.222 0.00 0.00 0.00 4.96
1027 2864 2.935481 TGGGAGAGGGCAAGTGGG 60.935 66.667 0.00 0.00 0.00 4.61
1028 2865 2.352805 GTGGGAGAGGGCAAGTGG 59.647 66.667 0.00 0.00 0.00 4.00
1029 2866 2.190488 GAGGTGGGAGAGGGCAAGTG 62.190 65.000 0.00 0.00 0.00 3.16
1030 2867 1.920835 GAGGTGGGAGAGGGCAAGT 60.921 63.158 0.00 0.00 0.00 3.16
1031 2868 2.993853 GAGGTGGGAGAGGGCAAG 59.006 66.667 0.00 0.00 0.00 4.01
1032 2869 3.003173 CGAGGTGGGAGAGGGCAA 61.003 66.667 0.00 0.00 0.00 4.52
1057 2894 1.124477 GTAGGAGGAGGAGCCCATGG 61.124 65.000 4.14 4.14 37.37 3.66
1058 2895 1.124477 GGTAGGAGGAGGAGCCCATG 61.124 65.000 0.00 0.00 37.37 3.66
1059 2896 1.237458 GGTAGGAGGAGGAGCCCAT 59.763 63.158 0.00 0.00 37.37 4.00
1060 2897 1.941820 AGGTAGGAGGAGGAGCCCA 60.942 63.158 0.00 0.00 37.37 5.36
1061 2898 1.152419 GAGGTAGGAGGAGGAGCCC 60.152 68.421 0.00 0.00 37.37 5.19
1062 2899 1.152419 GGAGGTAGGAGGAGGAGCC 60.152 68.421 0.00 0.00 0.00 4.70
1063 2900 1.152419 GGGAGGTAGGAGGAGGAGC 60.152 68.421 0.00 0.00 0.00 4.70
1064 2901 1.544703 GGGGAGGTAGGAGGAGGAG 59.455 68.421 0.00 0.00 0.00 3.69
1065 2902 2.019272 GGGGGAGGTAGGAGGAGGA 61.019 68.421 0.00 0.00 0.00 3.71
1066 2903 2.333462 TGGGGGAGGTAGGAGGAGG 61.333 68.421 0.00 0.00 0.00 4.30
1067 2904 1.075151 GTGGGGGAGGTAGGAGGAG 60.075 68.421 0.00 0.00 0.00 3.69
1068 2905 3.005148 CGTGGGGGAGGTAGGAGGA 62.005 68.421 0.00 0.00 0.00 3.71
1069 2906 2.444140 CGTGGGGGAGGTAGGAGG 60.444 72.222 0.00 0.00 0.00 4.30
1070 2907 1.757340 GTCGTGGGGGAGGTAGGAG 60.757 68.421 0.00 0.00 0.00 3.69
1071 2908 1.882189 ATGTCGTGGGGGAGGTAGGA 61.882 60.000 0.00 0.00 0.00 2.94
1072 2909 1.382695 ATGTCGTGGGGGAGGTAGG 60.383 63.158 0.00 0.00 0.00 3.18
1073 2910 1.686325 CCATGTCGTGGGGGAGGTAG 61.686 65.000 2.78 0.00 44.79 3.18
1074 2911 1.687840 CCATGTCGTGGGGGAGGTA 60.688 63.158 2.78 0.00 44.79 3.08
1075 2912 3.009115 CCATGTCGTGGGGGAGGT 61.009 66.667 2.78 0.00 44.79 3.85
1083 2920 1.668419 GGGGAGAAATCCATGTCGTG 58.332 55.000 0.00 0.00 0.00 4.35
1084 2921 0.546598 GGGGGAGAAATCCATGTCGT 59.453 55.000 0.00 0.00 0.00 4.34
1085 2922 0.839946 AGGGGGAGAAATCCATGTCG 59.160 55.000 0.00 0.00 0.00 4.35
1086 2923 2.106684 GGTAGGGGGAGAAATCCATGTC 59.893 54.545 0.00 0.00 0.00 3.06
1087 2924 2.136026 GGTAGGGGGAGAAATCCATGT 58.864 52.381 0.00 0.00 0.00 3.21
1088 2925 2.373502 GAGGTAGGGGGAGAAATCCATG 59.626 54.545 0.00 0.00 0.00 3.66
1089 2926 2.700540 GGAGGTAGGGGGAGAAATCCAT 60.701 54.545 0.00 0.00 0.00 3.41
1090 2927 1.345112 GGAGGTAGGGGGAGAAATCCA 60.345 57.143 0.00 0.00 0.00 3.41
1091 2928 1.436326 GGAGGTAGGGGGAGAAATCC 58.564 60.000 0.00 0.00 0.00 3.01
1092 2929 1.436326 GGGAGGTAGGGGGAGAAATC 58.564 60.000 0.00 0.00 0.00 2.17
1093 2930 0.028955 GGGGAGGTAGGGGGAGAAAT 60.029 60.000 0.00 0.00 0.00 2.17
1094 2931 1.399057 GGGGAGGTAGGGGGAGAAA 59.601 63.158 0.00 0.00 0.00 2.52
1095 2932 3.017896 CGGGGAGGTAGGGGGAGAA 62.018 68.421 0.00 0.00 0.00 2.87
1096 2933 3.436028 CGGGGAGGTAGGGGGAGA 61.436 72.222 0.00 0.00 0.00 3.71
1103 2940 2.838225 ATGTCGGCGGGGAGGTAG 60.838 66.667 7.21 0.00 0.00 3.18
1104 2941 3.151710 CATGTCGGCGGGGAGGTA 61.152 66.667 7.21 0.00 0.00 3.08
1135 2972 4.753662 TGAGGGAGGGGTCGTCGG 62.754 72.222 0.00 0.00 0.00 4.79
1136 2973 2.678934 TTGAGGGAGGGGTCGTCG 60.679 66.667 0.00 0.00 0.00 5.12
1137 2974 2.657066 GGTTGAGGGAGGGGTCGTC 61.657 68.421 0.00 0.00 0.00 4.20
1138 2975 2.606826 GGTTGAGGGAGGGGTCGT 60.607 66.667 0.00 0.00 0.00 4.34
1139 2976 2.284699 AGGTTGAGGGAGGGGTCG 60.285 66.667 0.00 0.00 0.00 4.79
1140 2977 0.338814 TAGAGGTTGAGGGAGGGGTC 59.661 60.000 0.00 0.00 0.00 4.46
1141 2978 0.042881 GTAGAGGTTGAGGGAGGGGT 59.957 60.000 0.00 0.00 0.00 4.95
1142 2979 0.691413 GGTAGAGGTTGAGGGAGGGG 60.691 65.000 0.00 0.00 0.00 4.79
1143 2980 0.340208 AGGTAGAGGTTGAGGGAGGG 59.660 60.000 0.00 0.00 0.00 4.30
1144 2981 1.289530 AGAGGTAGAGGTTGAGGGAGG 59.710 57.143 0.00 0.00 0.00 4.30
1145 2982 2.661718 GAGAGGTAGAGGTTGAGGGAG 58.338 57.143 0.00 0.00 0.00 4.30
1146 2983 1.288335 GGAGAGGTAGAGGTTGAGGGA 59.712 57.143 0.00 0.00 0.00 4.20
1147 2984 1.783071 GGAGAGGTAGAGGTTGAGGG 58.217 60.000 0.00 0.00 0.00 4.30
1148 2985 1.064611 TCGGAGAGGTAGAGGTTGAGG 60.065 57.143 0.00 0.00 0.00 3.86
1149 2986 2.018515 GTCGGAGAGGTAGAGGTTGAG 58.981 57.143 0.00 0.00 36.95 3.02
1150 2987 1.340795 GGTCGGAGAGGTAGAGGTTGA 60.341 57.143 0.00 0.00 36.95 3.18
1322 3325 2.203126 CGGGAGATGAAGGGCAGC 60.203 66.667 0.00 0.00 0.00 5.25
1792 3795 0.897401 TGCGTGGCCATTGAATCCAA 60.897 50.000 9.72 0.00 36.61 3.53
1796 3799 1.660560 GAGCTGCGTGGCCATTGAAT 61.661 55.000 9.72 0.00 0.00 2.57
1842 3845 2.508526 CACCACCTCCTCCTTTTTCAG 58.491 52.381 0.00 0.00 0.00 3.02
1844 3847 1.423921 TCCACCACCTCCTCCTTTTTC 59.576 52.381 0.00 0.00 0.00 2.29
1847 3850 0.995024 CATCCACCACCTCCTCCTTT 59.005 55.000 0.00 0.00 0.00 3.11
1858 3861 3.770040 CCGAGACCGCATCCACCA 61.770 66.667 0.00 0.00 0.00 4.17
1910 3913 1.683385 TCCAGCTCGTCATCATGGTAG 59.317 52.381 0.00 0.00 32.68 3.18
2096 4099 3.682409 CCATTGGCCCCCTTCCCA 61.682 66.667 0.00 0.00 0.00 4.37
2279 4282 1.252904 GGCCCTCTGCAAAGCAATGA 61.253 55.000 0.00 0.00 43.89 2.57
2614 4617 2.481104 CCTGTCTCTTCAATCCGCTCTC 60.481 54.545 0.00 0.00 0.00 3.20
2658 4661 3.749088 TCGAACGGCACATTAAACTCATT 59.251 39.130 0.00 0.00 0.00 2.57
2909 4912 2.019951 CTCCCGAAACCGTGTCACG 61.020 63.158 18.54 18.54 42.11 4.35
2945 4948 2.893489 GTCCAGAACATCAAAAAGGGCT 59.107 45.455 0.00 0.00 0.00 5.19
3370 5373 3.388350 AGGCTACTTAACTAGACCATGGC 59.612 47.826 13.04 4.70 0.00 4.40
3434 5438 3.622612 GGAATGCCAAATATGCACCAAAC 59.377 43.478 0.00 0.00 42.38 2.93
3479 5483 0.458889 CATCGCACAAATTGGCCCTG 60.459 55.000 0.00 0.00 0.00 4.45
3584 5588 7.507616 AGTCTAAACTCTACATAGCTAGGCATT 59.492 37.037 5.07 0.00 0.00 3.56
3649 5655 4.214971 GGATTGATCACAGGCACATATCAC 59.785 45.833 0.00 0.00 0.00 3.06
3827 5834 7.520686 CAAAATATTTGGTTTCCTGCATGAAC 58.479 34.615 3.69 1.54 0.00 3.18
4078 6096 3.303857 GCATGAGCTGTATCATTCAGTGC 60.304 47.826 0.00 0.00 37.84 4.40
4181 6202 2.307768 TGTCCCAGATCATCGGTCTAC 58.692 52.381 0.00 0.00 0.00 2.59
4337 6358 2.423898 ATGTCTCGTGCTACCCCCG 61.424 63.158 0.00 0.00 0.00 5.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.