Multiple sequence alignment - TraesCS5A01G079800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G079800 chr5A 100.000 9393 0 0 1 9393 99424661 99415269 0.000000e+00 17346
1 TraesCS5A01G079800 chr5A 93.943 743 27 8 2332 3073 99587850 99588575 0.000000e+00 1107
2 TraesCS5A01G079800 chr5A 87.119 1017 77 27 5060 6062 99592960 99593936 0.000000e+00 1103
3 TraesCS5A01G079800 chr5A 92.308 741 36 9 4248 4971 99592179 99592915 0.000000e+00 1033
4 TraesCS5A01G079800 chr5A 84.093 943 77 28 3868 4769 99421111 99420201 0.000000e+00 843
5 TraesCS5A01G079800 chr5A 93.047 489 17 3 3075 3562 99588661 99589133 0.000000e+00 699
6 TraesCS5A01G079800 chr5A 88.870 575 46 11 3553 4115 99591572 99592140 0.000000e+00 691
7 TraesCS5A01G079800 chr5A 88.160 549 53 10 3619 4159 99592166 99592710 2.210000e-180 643
8 TraesCS5A01G079800 chr5A 83.895 683 77 17 4248 4912 99594277 99594944 1.040000e-173 621
9 TraesCS5A01G079800 chr5A 85.556 540 51 16 4248 4769 99421030 99420500 2.980000e-149 540
10 TraesCS5A01G079800 chr5A 80.924 498 64 20 4248 4723 99591652 99592140 1.930000e-96 364
11 TraesCS5A01G079800 chr5A 92.437 238 18 0 4997 5234 99600406 99600643 3.250000e-89 340
12 TraesCS5A01G079800 chr5A 85.217 230 19 4 4551 4766 99592162 99592390 1.230000e-53 222
13 TraesCS5A01G079800 chr5A 89.744 156 13 2 9192 9347 354544082 354544234 7.440000e-46 196
14 TraesCS5A01G079800 chr5B 93.876 3119 114 34 6097 9192 109219583 109222647 0.000000e+00 4630
15 TraesCS5A01G079800 chr5B 95.165 1820 66 11 4248 6062 109217786 109219588 0.000000e+00 2854
16 TraesCS5A01G079800 chr5B 92.141 1705 83 16 4378 6062 108983521 108981848 0.000000e+00 2359
17 TraesCS5A01G079800 chr5B 91.215 1753 105 22 2332 4079 108985390 108983682 0.000000e+00 2338
18 TraesCS5A01G079800 chr5B 88.250 1983 143 49 314 2246 109211549 109213491 0.000000e+00 2289
19 TraesCS5A01G079800 chr5B 92.236 1494 80 19 2325 3796 109213535 109215014 0.000000e+00 2084
20 TraesCS5A01G079800 chr5B 84.876 1005 94 25 4248 5234 108954409 108953445 0.000000e+00 961
21 TraesCS5A01G079800 chr5B 83.671 741 100 12 3431 4162 108954614 108953886 0.000000e+00 678
22 TraesCS5A01G079800 chr5B 86.827 539 42 13 6097 6609 108981853 108981318 8.180000e-160 575
23 TraesCS5A01G079800 chr5B 85.321 545 32 11 3937 4458 109217775 109218294 3.890000e-143 520
24 TraesCS5A01G079800 chr5B 91.316 380 30 3 3784 4162 108983494 108983117 5.030000e-142 516
25 TraesCS5A01G079800 chr5B 92.857 322 21 2 3931 4252 109215036 109215355 5.140000e-127 466
26 TraesCS5A01G079800 chr5B 85.570 395 40 12 8812 9195 473283190 473282802 1.900000e-106 398
27 TraesCS5A01G079800 chr5B 88.957 326 29 5 4248 4571 109215053 109215373 6.840000e-106 396
28 TraesCS5A01G079800 chr5B 86.555 238 17 4 3195 3432 108981326 108981104 2.030000e-61 248
29 TraesCS5A01G079800 chr5B 88.128 219 11 4 4557 4761 109217775 109217992 7.280000e-61 246
30 TraesCS5A01G079800 chr5B 90.385 156 14 1 9192 9347 299602377 299602223 4.450000e-48 204
31 TraesCS5A01G079800 chr5B 88.667 150 16 1 9199 9348 44628491 44628343 2.080000e-41 182
32 TraesCS5A01G079800 chr5B 83.974 156 22 2 9193 9347 693662776 693662929 7.600000e-31 147
33 TraesCS5A01G079800 chr5D 95.155 2910 90 19 6097 9004 100930687 100933547 0.000000e+00 4545
34 TraesCS5A01G079800 chr5D 93.342 2358 100 21 2328 4650 100927049 100929384 0.000000e+00 3432
35 TraesCS5A01G079800 chr5D 91.685 1852 79 25 4248 6062 100549276 100547463 0.000000e+00 2497
36 TraesCS5A01G079800 chr5D 95.403 1327 34 8 4737 6062 100929392 100930692 0.000000e+00 2087
37 TraesCS5A01G079800 chr5D 92.956 1377 54 18 2332 3676 100551314 100549949 0.000000e+00 1965
38 TraesCS5A01G079800 chr5D 86.209 1762 106 61 15 1726 100924913 100926587 0.000000e+00 1781
39 TraesCS5A01G079800 chr5D 84.340 977 116 19 3195 4162 100546940 100545992 0.000000e+00 922
40 TraesCS5A01G079800 chr5D 85.005 947 82 28 3861 4766 100928264 100929191 0.000000e+00 907
41 TraesCS5A01G079800 chr5D 83.151 1003 100 26 4248 5234 100546515 100545566 0.000000e+00 852
42 TraesCS5A01G079800 chr5D 85.520 808 79 18 3551 4329 100928586 100929384 0.000000e+00 809
43 TraesCS5A01G079800 chr5D 88.022 551 55 9 3619 4162 100549289 100548743 7.950000e-180 641
44 TraesCS5A01G079800 chr5D 88.104 538 36 12 6097 6608 100547468 100546933 1.730000e-171 614
45 TraesCS5A01G079800 chr5D 95.342 365 16 1 9029 9393 100933539 100933902 6.320000e-161 579
46 TraesCS5A01G079800 chr5D 85.120 457 25 24 1794 2246 100926585 100927002 2.420000e-115 427
47 TraesCS5A01G079800 chr5D 86.784 227 15 5 4557 4769 100549287 100549062 1.220000e-58 239
48 TraesCS5A01G079800 chr5D 85.256 156 20 2 9193 9347 559421076 559421229 3.510000e-34 158
49 TraesCS5A01G079800 chr6B 85.942 939 111 7 6870 7802 442978230 442977307 0.000000e+00 983
50 TraesCS5A01G079800 chr6B 85.912 937 108 7 6869 7799 441861341 441860423 0.000000e+00 977
51 TraesCS5A01G079800 chr6B 86.731 618 59 9 7182 7799 88826779 88826185 0.000000e+00 665
52 TraesCS5A01G079800 chr4D 90.582 584 41 11 8585 9157 60872907 60873487 0.000000e+00 761
53 TraesCS5A01G079800 chr4D 87.826 115 13 1 8983 9096 482952832 482952946 5.920000e-27 134
54 TraesCS5A01G079800 chr7B 88.424 622 52 15 8585 9194 332399586 332400199 0.000000e+00 732
55 TraesCS5A01G079800 chr7B 87.702 618 51 10 7182 7799 687564520 687565112 0.000000e+00 697
56 TraesCS5A01G079800 chr7B 85.390 397 41 11 8810 9195 209396741 209397131 6.840000e-106 396
57 TraesCS5A01G079800 chr3D 87.055 618 61 4 7182 7799 501135389 501134791 0.000000e+00 680
58 TraesCS5A01G079800 chr3D 86.835 395 35 12 8812 9195 153511017 153510629 8.720000e-115 425
59 TraesCS5A01G079800 chr3D 92.544 228 12 3 6361 6588 501135648 501135426 1.180000e-83 322
60 TraesCS5A01G079800 chr2B 86.753 619 62 7 7182 7799 711199697 711199098 0.000000e+00 671
61 TraesCS5A01G079800 chr2B 91.228 228 18 1 6361 6588 711199959 711199734 9.160000e-80 309
62 TraesCS5A01G079800 chr7D 86.731 618 63 7 7182 7799 176562325 176561727 0.000000e+00 669
63 TraesCS5A01G079800 chr7D 92.544 228 17 0 6361 6588 176562589 176562362 2.530000e-85 327
64 TraesCS5A01G079800 chr3B 86.835 395 35 12 8812 9195 225178175 225177787 8.720000e-115 425
65 TraesCS5A01G079800 chr3B 84.304 395 46 12 8812 9195 708715352 708715741 1.150000e-98 372
66 TraesCS5A01G079800 chr3B 85.443 158 14 5 9194 9347 578775118 578775270 1.260000e-33 156
67 TraesCS5A01G079800 chr3A 86.076 395 38 12 8812 9195 176143973 176144361 8.780000e-110 409
68 TraesCS5A01G079800 chr3A 83.766 154 24 1 9194 9347 506918828 506918980 2.730000e-30 145
69 TraesCS5A01G079800 chr4B 94.298 228 13 0 6361 6588 241713277 241713504 5.400000e-92 350
70 TraesCS5A01G079800 chr6A 93.013 229 15 1 6361 6588 271637315 271637087 5.440000e-87 333
71 TraesCS5A01G079800 chr1B 93.750 96 6 0 8632 8727 561641507 561641602 2.730000e-30 145
72 TraesCS5A01G079800 chr4A 82.692 156 22 3 9193 9347 612428971 612429122 5.920000e-27 134


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G079800 chr5A 99415269 99424661 9392 True 17346.000000 17346 100.000000 1 9393 1 chr5A.!!$R1 9392
1 TraesCS5A01G079800 chr5A 99587850 99594944 7094 False 720.333333 1107 88.164778 2332 6062 9 chr5A.!!$F3 3730
2 TraesCS5A01G079800 chr5A 99420201 99421111 910 True 691.500000 843 84.824500 3868 4769 2 chr5A.!!$R2 901
3 TraesCS5A01G079800 chr5B 109211549 109222647 11098 False 1685.625000 4630 90.598750 314 9192 8 chr5B.!!$F2 8878
4 TraesCS5A01G079800 chr5B 108981104 108985390 4286 True 1207.200000 2359 89.610800 2332 6609 5 chr5B.!!$R5 4277
5 TraesCS5A01G079800 chr5B 108953445 108954614 1169 True 819.500000 961 84.273500 3431 5234 2 chr5B.!!$R4 1803
6 TraesCS5A01G079800 chr5D 100924913 100933902 8989 False 1820.875000 4545 90.137000 15 9393 8 chr5D.!!$F2 9378
7 TraesCS5A01G079800 chr5D 100545566 100551314 5748 True 1104.285714 2497 87.863143 2332 6608 7 chr5D.!!$R1 4276
8 TraesCS5A01G079800 chr6B 442977307 442978230 923 True 983.000000 983 85.942000 6870 7802 1 chr6B.!!$R3 932
9 TraesCS5A01G079800 chr6B 441860423 441861341 918 True 977.000000 977 85.912000 6869 7799 1 chr6B.!!$R2 930
10 TraesCS5A01G079800 chr6B 88826185 88826779 594 True 665.000000 665 86.731000 7182 7799 1 chr6B.!!$R1 617
11 TraesCS5A01G079800 chr4D 60872907 60873487 580 False 761.000000 761 90.582000 8585 9157 1 chr4D.!!$F1 572
12 TraesCS5A01G079800 chr7B 332399586 332400199 613 False 732.000000 732 88.424000 8585 9194 1 chr7B.!!$F2 609
13 TraesCS5A01G079800 chr7B 687564520 687565112 592 False 697.000000 697 87.702000 7182 7799 1 chr7B.!!$F3 617
14 TraesCS5A01G079800 chr3D 501134791 501135648 857 True 501.000000 680 89.799500 6361 7799 2 chr3D.!!$R2 1438
15 TraesCS5A01G079800 chr2B 711199098 711199959 861 True 490.000000 671 88.990500 6361 7799 2 chr2B.!!$R1 1438
16 TraesCS5A01G079800 chr7D 176561727 176562589 862 True 498.000000 669 89.637500 6361 7799 2 chr7D.!!$R1 1438

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
109 113 0.179234 CCAACCCAACCAACCCAAAC 59.821 55.000 0.00 0.00 0.00 2.93 F
1433 1477 0.249955 TGCATGATCCTTCGTCTGCA 59.750 50.000 0.00 0.00 0.00 4.41 F
1744 1909 0.041312 CTTCTTCGTGGTGCCGTTTG 60.041 55.000 0.00 0.00 0.00 2.93 F
2316 2495 0.039527 GCGGCAAGTTTCGTGGAATT 60.040 50.000 0.00 0.00 0.00 2.17 F
2937 3127 0.247974 GACAGCAATGCATCTGCGTC 60.248 55.000 23.91 23.91 44.75 5.19 F
3123 3397 0.249573 CCAAACTGCAACTTGCCTGG 60.250 55.000 11.29 8.65 44.23 4.45 F
3434 3708 0.399806 AACCAATTTGGGGCCACAGT 60.400 50.000 19.39 0.00 43.37 3.55 F
4317 10234 1.888512 GTGTGCAATTGAGGTCCACAT 59.111 47.619 10.34 0.00 38.50 3.21 F
5423 11384 1.607467 CCCCAAAGCCCAGAACCTG 60.607 63.158 0.00 0.00 0.00 4.00 F
6260 12258 0.323957 ACAGTACCCCGAAAGAAGGC 59.676 55.000 0.00 0.00 0.00 4.35 F
7122 13128 0.846693 ATATGGTCCTTCTGCCACCC 59.153 55.000 0.00 0.00 37.62 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1728 1893 0.110238 CATCAAACGGCACCACGAAG 60.110 55.000 0.00 0.00 37.61 3.79 R
2297 2476 0.039527 AATTCCACGAAACTTGCCGC 60.040 50.000 0.00 0.00 0.00 6.53 R
3433 3707 0.108019 ACTTTTCGGTCCCTCCACAC 59.892 55.000 0.00 0.00 35.57 3.82 R
3434 3708 0.841289 AACTTTTCGGTCCCTCCACA 59.159 50.000 0.00 0.00 35.57 4.17 R
4494 10415 4.913335 AGTAAAGACACTGAACACTCGA 57.087 40.909 0.00 0.00 0.00 4.04 R
4938 10878 3.444034 CCTGTGTGCTTGAGCTACTACTA 59.556 47.826 4.44 0.00 42.66 1.82 R
5038 10978 4.213270 CACTTGGAAATAGCGAGAACAACA 59.787 41.667 0.00 0.00 0.00 3.33 R
6075 12047 0.538746 GGCCTGACCCCTTTTCGAAA 60.539 55.000 6.47 6.47 0.00 3.46 R
7059 13065 0.179073 GGACTACACGCATCCTGCAT 60.179 55.000 0.00 0.00 45.36 3.96 R
7472 13478 0.237498 CGGTCCTTGTTCGGCTTTTC 59.763 55.000 0.00 0.00 0.00 2.29 R
8433 14466 2.169832 TCGCCTGCCTTATTCTATGC 57.830 50.000 0.00 0.00 0.00 3.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.008330 CACAGCGTACAGGAGTAGTAGT 58.992 50.000 0.00 0.00 0.00 2.73
24 25 4.081198 ACAGCGTACAGGAGTAGTAGTAGT 60.081 45.833 0.00 0.00 0.00 2.73
77 78 1.067582 GTGCCCCGAGGAAGATACG 59.932 63.158 0.00 0.00 33.47 3.06
78 79 2.029221 GCCCCGAGGAAGATACGC 59.971 66.667 0.00 0.00 33.47 4.42
95 99 4.631740 CCCCACCCCAACCCAACC 62.632 72.222 0.00 0.00 0.00 3.77
97 101 3.838913 CCACCCCAACCCAACCCA 61.839 66.667 0.00 0.00 0.00 4.51
98 102 2.283809 CACCCCAACCCAACCCAA 59.716 61.111 0.00 0.00 0.00 4.12
100 104 2.525629 CCCCAACCCAACCCAACC 60.526 66.667 0.00 0.00 0.00 3.77
101 105 2.283809 CCCAACCCAACCCAACCA 59.716 61.111 0.00 0.00 0.00 3.67
102 106 1.383248 CCCAACCCAACCCAACCAA 60.383 57.895 0.00 0.00 0.00 3.67
103 107 1.691195 CCCAACCCAACCCAACCAAC 61.691 60.000 0.00 0.00 0.00 3.77
104 108 1.691195 CCAACCCAACCCAACCAACC 61.691 60.000 0.00 0.00 0.00 3.77
105 109 1.383386 AACCCAACCCAACCAACCC 60.383 57.895 0.00 0.00 0.00 4.11
106 110 2.182858 AACCCAACCCAACCAACCCA 62.183 55.000 0.00 0.00 0.00 4.51
107 111 1.383248 CCCAACCCAACCAACCCAA 60.383 57.895 0.00 0.00 0.00 4.12
108 112 0.983378 CCCAACCCAACCAACCCAAA 60.983 55.000 0.00 0.00 0.00 3.28
109 113 0.179234 CCAACCCAACCAACCCAAAC 59.821 55.000 0.00 0.00 0.00 2.93
110 114 0.179234 CAACCCAACCAACCCAAACC 59.821 55.000 0.00 0.00 0.00 3.27
111 115 0.983905 AACCCAACCAACCCAAACCC 60.984 55.000 0.00 0.00 0.00 4.11
112 116 2.503382 CCCAACCAACCCAAACCCG 61.503 63.158 0.00 0.00 0.00 5.28
113 117 1.758906 CCAACCAACCCAAACCCGT 60.759 57.895 0.00 0.00 0.00 5.28
114 118 1.737201 CAACCAACCCAAACCCGTC 59.263 57.895 0.00 0.00 0.00 4.79
115 119 1.456145 AACCAACCCAAACCCGTCC 60.456 57.895 0.00 0.00 0.00 4.79
116 120 2.599281 CCAACCCAAACCCGTCCC 60.599 66.667 0.00 0.00 0.00 4.46
117 121 2.196229 CAACCCAAACCCGTCCCA 59.804 61.111 0.00 0.00 0.00 4.37
118 122 2.196502 AACCCAAACCCGTCCCAC 59.803 61.111 0.00 0.00 0.00 4.61
119 123 3.778097 AACCCAAACCCGTCCCACG 62.778 63.158 0.00 0.00 42.11 4.94
148 152 2.267961 CCACCGCCACCTTCTACC 59.732 66.667 0.00 0.00 0.00 3.18
150 154 2.203877 ACCGCCACCTTCTACCCA 60.204 61.111 0.00 0.00 0.00 4.51
151 155 1.844289 ACCGCCACCTTCTACCCAA 60.844 57.895 0.00 0.00 0.00 4.12
162 173 2.668144 TCTACCCAACAAAACCCCTG 57.332 50.000 0.00 0.00 0.00 4.45
179 190 2.371897 CTGGCTCCCCACAAAACCCT 62.372 60.000 0.00 0.00 35.79 4.34
182 193 0.965866 GCTCCCCACAAAACCCTAGC 60.966 60.000 0.00 0.00 0.00 3.42
194 205 2.434884 CCTAGCACCGCACACTGG 60.435 66.667 0.00 0.00 0.00 4.00
241 252 2.338620 CCCGTCAGCGACTGAACA 59.661 61.111 10.46 0.00 42.46 3.18
242 253 1.734477 CCCGTCAGCGACTGAACAG 60.734 63.158 10.46 0.00 42.46 3.16
246 257 1.300931 TCAGCGACTGAACAGGCAC 60.301 57.895 8.42 0.00 37.57 5.01
280 291 0.748729 CGAAGCTACCCCGTCTCTCT 60.749 60.000 0.00 0.00 0.00 3.10
285 296 1.409101 GCTACCCCGTCTCTCTCTCTT 60.409 57.143 0.00 0.00 0.00 2.85
286 297 2.946791 GCTACCCCGTCTCTCTCTCTTT 60.947 54.545 0.00 0.00 0.00 2.52
287 298 1.842052 ACCCCGTCTCTCTCTCTTTC 58.158 55.000 0.00 0.00 0.00 2.62
288 299 1.356398 ACCCCGTCTCTCTCTCTTTCT 59.644 52.381 0.00 0.00 0.00 2.52
391 402 2.391389 GGAAGGCGACAAAGCGGAG 61.391 63.158 0.00 0.00 38.18 4.63
392 403 2.358737 AAGGCGACAAAGCGGAGG 60.359 61.111 0.00 0.00 38.18 4.30
630 660 2.511637 AGAGCTTTTAATGGGAGGAGGG 59.488 50.000 0.00 0.00 0.00 4.30
666 696 1.002087 CGAAAGCTGTGAAGGGGTACT 59.998 52.381 0.00 0.00 0.00 2.73
669 702 1.183549 AGCTGTGAAGGGGTACTACG 58.816 55.000 0.00 0.00 0.00 3.51
674 710 0.680921 TGAAGGGGTACTACGACGGG 60.681 60.000 0.00 0.00 0.00 5.28
716 756 2.689471 AGACATGCTGTGCTAGAGAGAG 59.311 50.000 0.00 0.00 0.00 3.20
718 758 2.689471 ACATGCTGTGCTAGAGAGAGAG 59.311 50.000 0.00 0.00 0.00 3.20
719 759 2.797177 TGCTGTGCTAGAGAGAGAGA 57.203 50.000 0.00 0.00 0.00 3.10
720 760 2.364632 TGCTGTGCTAGAGAGAGAGAC 58.635 52.381 0.00 0.00 0.00 3.36
721 761 1.330521 GCTGTGCTAGAGAGAGAGACG 59.669 57.143 0.00 0.00 0.00 4.18
726 766 2.210116 GCTAGAGAGAGAGACGGTGAG 58.790 57.143 0.00 0.00 0.00 3.51
730 770 0.326595 AGAGAGAGACGGTGAGCAGA 59.673 55.000 0.00 0.00 0.00 4.26
742 782 3.073735 AGCAGAGAGGGACAGGCG 61.074 66.667 0.00 0.00 0.00 5.52
834 874 4.144727 GAGGGCGGGGAGAGGAGA 62.145 72.222 0.00 0.00 0.00 3.71
909 949 2.594592 AGGCGCAGGGTGTTTGTC 60.595 61.111 10.83 0.00 0.00 3.18
924 964 2.807045 GTCTGTGTGAGCGAGCGG 60.807 66.667 0.00 0.00 0.00 5.52
926 966 4.056125 CTGTGTGAGCGAGCGGGA 62.056 66.667 0.00 0.00 0.00 5.14
947 987 1.900545 GAGGGTGGAGAGGGGTTTCG 61.901 65.000 0.00 0.00 0.00 3.46
948 988 2.669240 GGTGGAGAGGGGTTTCGG 59.331 66.667 0.00 0.00 0.00 4.30
951 991 2.285144 GGAGAGGGGTTTCGGGGA 60.285 66.667 0.00 0.00 0.00 4.81
952 992 1.921857 GGAGAGGGGTTTCGGGGAA 60.922 63.158 0.00 0.00 0.00 3.97
966 1007 2.350514 GGAAGCAGCAGAGCAGGT 59.649 61.111 0.00 0.00 36.85 4.00
1063 1104 1.698165 TTCTTCGTCATCTGCGTGTC 58.302 50.000 0.00 0.00 0.00 3.67
1082 1123 0.454957 CGCTGATTTGTTTCCGCCTG 60.455 55.000 0.00 0.00 0.00 4.85
1136 1177 4.458397 TGAGATGAGATGATTTTGGCCTC 58.542 43.478 3.32 0.00 0.00 4.70
1164 1206 2.801631 GGTGGGCCTCTCCGATGAG 61.802 68.421 4.53 0.00 40.17 2.90
1229 1271 3.700350 AGGGAGGGAGGGAGGTGG 61.700 72.222 0.00 0.00 0.00 4.61
1230 1272 4.026357 GGGAGGGAGGGAGGTGGT 62.026 72.222 0.00 0.00 0.00 4.16
1231 1273 2.643808 GGGAGGGAGGGAGGTGGTA 61.644 68.421 0.00 0.00 0.00 3.25
1232 1274 1.394963 GGAGGGAGGGAGGTGGTAA 59.605 63.158 0.00 0.00 0.00 2.85
1256 1298 1.161563 TGGTCCTTCGTTTTCGGTGC 61.162 55.000 0.00 0.00 44.25 5.01
1257 1299 1.572941 GTCCTTCGTTTTCGGTGCC 59.427 57.895 0.00 0.00 44.25 5.01
1258 1300 1.957186 TCCTTCGTTTTCGGTGCCG 60.957 57.895 3.94 3.94 44.25 5.69
1263 1305 2.250190 GTTTTCGGTGCCGGTTCG 59.750 61.111 10.94 5.02 40.25 3.95
1307 1350 2.360600 TTTCGGGGCACGGGATTG 60.361 61.111 10.28 0.00 44.45 2.67
1332 1375 1.192428 TTTCTCCTACCTTCTCCGCC 58.808 55.000 0.00 0.00 0.00 6.13
1343 1386 2.281900 CTCCGCCGGGGTTTTCAA 60.282 61.111 18.27 0.00 37.00 2.69
1398 1442 2.434359 CCTGGTTTCTCGCGGGTC 60.434 66.667 5.57 0.00 0.00 4.46
1427 1471 1.930100 GCGTCTGCATGATCCTTCG 59.070 57.895 0.00 0.00 42.15 3.79
1428 1472 0.807667 GCGTCTGCATGATCCTTCGT 60.808 55.000 0.00 0.00 42.15 3.85
1429 1473 1.203928 CGTCTGCATGATCCTTCGTC 58.796 55.000 0.00 0.00 0.00 4.20
1430 1474 1.202348 CGTCTGCATGATCCTTCGTCT 60.202 52.381 0.00 0.00 0.00 4.18
1431 1475 2.200067 GTCTGCATGATCCTTCGTCTG 58.800 52.381 0.00 0.00 0.00 3.51
1432 1476 0.935898 CTGCATGATCCTTCGTCTGC 59.064 55.000 0.00 0.00 0.00 4.26
1433 1477 0.249955 TGCATGATCCTTCGTCTGCA 59.750 50.000 0.00 0.00 0.00 4.41
1446 1490 1.791204 CGTCTGCATGATCCTTCATCG 59.209 52.381 0.00 0.00 40.70 3.84
1455 1499 4.918201 CCTTCATCGCGCTCCCCC 62.918 72.222 5.56 0.00 0.00 5.40
1464 1537 4.530857 CGCTCCCCCGTCCATGAC 62.531 72.222 0.00 0.00 0.00 3.06
1480 1553 2.203294 ACCCACCGTTTGCTGTCC 60.203 61.111 0.00 0.00 0.00 4.02
1537 1610 4.592485 TCAAGTCTTCTGTCACTCCTTC 57.408 45.455 0.00 0.00 0.00 3.46
1559 1632 2.044551 CCCTTTGCTCCTCCTGCC 60.045 66.667 0.00 0.00 0.00 4.85
1560 1633 2.044551 CCTTTGCTCCTCCTGCCC 60.045 66.667 0.00 0.00 0.00 5.36
1572 1645 0.321298 TCCTGCCCGTGCTAGTTTTC 60.321 55.000 0.00 0.00 38.71 2.29
1605 1678 2.478879 CGTCCAGTGGTGGTTTGTTTTC 60.479 50.000 9.54 0.00 45.28 2.29
1614 1690 1.874872 TGGTTTGTTTTCGATCCGTCC 59.125 47.619 0.00 0.00 0.00 4.79
1615 1691 2.148768 GGTTTGTTTTCGATCCGTCCT 58.851 47.619 0.00 0.00 0.00 3.85
1616 1692 2.159037 GGTTTGTTTTCGATCCGTCCTC 59.841 50.000 0.00 0.00 0.00 3.71
1617 1693 3.064931 GTTTGTTTTCGATCCGTCCTCT 58.935 45.455 0.00 0.00 0.00 3.69
1642 1718 4.996122 TGCAAATGCTGGAAGTTAATTTGG 59.004 37.500 6.97 0.00 39.52 3.28
1726 1891 1.275657 CAAACGCGCGTGTTCTTCT 59.724 52.632 38.44 19.11 0.00 2.85
1727 1892 0.315869 CAAACGCGCGTGTTCTTCTT 60.316 50.000 38.44 22.13 0.00 2.52
1728 1893 0.042448 AAACGCGCGTGTTCTTCTTC 60.042 50.000 38.44 0.30 0.00 2.87
1729 1894 0.874607 AACGCGCGTGTTCTTCTTCT 60.875 50.000 38.44 14.10 0.00 2.85
1730 1895 0.874607 ACGCGCGTGTTCTTCTTCTT 60.875 50.000 37.37 4.40 0.00 2.52
1731 1896 0.179272 CGCGCGTGTTCTTCTTCTTC 60.179 55.000 24.19 0.00 0.00 2.87
1732 1897 0.179272 GCGCGTGTTCTTCTTCTTCG 60.179 55.000 8.43 0.00 0.00 3.79
1733 1898 1.129326 CGCGTGTTCTTCTTCTTCGT 58.871 50.000 0.00 0.00 0.00 3.85
1734 1899 1.136884 CGCGTGTTCTTCTTCTTCGTG 60.137 52.381 0.00 0.00 0.00 4.35
1735 1900 1.192534 GCGTGTTCTTCTTCTTCGTGG 59.807 52.381 0.00 0.00 0.00 4.94
1736 1901 2.470821 CGTGTTCTTCTTCTTCGTGGT 58.529 47.619 0.00 0.00 0.00 4.16
1737 1902 2.218759 CGTGTTCTTCTTCTTCGTGGTG 59.781 50.000 0.00 0.00 0.00 4.17
1738 1903 2.032808 GTGTTCTTCTTCTTCGTGGTGC 60.033 50.000 0.00 0.00 0.00 5.01
1739 1904 1.531578 GTTCTTCTTCTTCGTGGTGCC 59.468 52.381 0.00 0.00 0.00 5.01
1740 1905 0.319555 TCTTCTTCTTCGTGGTGCCG 60.320 55.000 0.00 0.00 0.00 5.69
1741 1906 0.600255 CTTCTTCTTCGTGGTGCCGT 60.600 55.000 0.00 0.00 0.00 5.68
1742 1907 0.179067 TTCTTCTTCGTGGTGCCGTT 60.179 50.000 0.00 0.00 0.00 4.44
1743 1908 0.179067 TCTTCTTCGTGGTGCCGTTT 60.179 50.000 0.00 0.00 0.00 3.60
1744 1909 0.041312 CTTCTTCGTGGTGCCGTTTG 60.041 55.000 0.00 0.00 0.00 2.93
1745 1910 0.462225 TTCTTCGTGGTGCCGTTTGA 60.462 50.000 0.00 0.00 0.00 2.69
1746 1911 0.250124 TCTTCGTGGTGCCGTTTGAT 60.250 50.000 0.00 0.00 0.00 2.57
1747 1912 0.110238 CTTCGTGGTGCCGTTTGATG 60.110 55.000 0.00 0.00 0.00 3.07
1748 1913 0.533085 TTCGTGGTGCCGTTTGATGA 60.533 50.000 0.00 0.00 0.00 2.92
1749 1914 0.948623 TCGTGGTGCCGTTTGATGAG 60.949 55.000 0.00 0.00 0.00 2.90
1750 1915 1.875963 GTGGTGCCGTTTGATGAGG 59.124 57.895 0.00 0.00 0.00 3.86
1751 1916 0.889186 GTGGTGCCGTTTGATGAGGT 60.889 55.000 0.00 0.00 0.00 3.85
1752 1917 0.605319 TGGTGCCGTTTGATGAGGTC 60.605 55.000 0.00 0.00 0.00 3.85
1753 1918 0.605319 GGTGCCGTTTGATGAGGTCA 60.605 55.000 0.00 0.00 34.25 4.02
1754 1919 1.453155 GTGCCGTTTGATGAGGTCAT 58.547 50.000 0.00 0.00 36.54 3.06
1755 1920 1.131126 GTGCCGTTTGATGAGGTCATG 59.869 52.381 0.00 0.00 36.54 3.07
1756 1921 0.734889 GCCGTTTGATGAGGTCATGG 59.265 55.000 0.00 0.00 36.54 3.66
1757 1922 1.950484 GCCGTTTGATGAGGTCATGGT 60.950 52.381 0.00 0.00 36.54 3.55
1758 1923 2.679639 GCCGTTTGATGAGGTCATGGTA 60.680 50.000 0.00 0.00 36.54 3.25
1759 1924 3.808728 CCGTTTGATGAGGTCATGGTAT 58.191 45.455 0.00 0.00 36.54 2.73
1760 1925 4.742440 GCCGTTTGATGAGGTCATGGTATA 60.742 45.833 0.00 0.00 36.54 1.47
1761 1926 5.551233 CCGTTTGATGAGGTCATGGTATAT 58.449 41.667 0.00 0.00 36.54 0.86
1762 1927 5.997746 CCGTTTGATGAGGTCATGGTATATT 59.002 40.000 0.00 0.00 36.54 1.28
1763 1928 6.147821 CCGTTTGATGAGGTCATGGTATATTC 59.852 42.308 0.00 0.00 36.54 1.75
1764 1929 6.147821 CGTTTGATGAGGTCATGGTATATTCC 59.852 42.308 0.00 0.00 36.54 3.01
1765 1930 7.227156 GTTTGATGAGGTCATGGTATATTCCT 58.773 38.462 0.00 0.00 36.54 3.36
1766 1931 7.392766 TTGATGAGGTCATGGTATATTCCTT 57.607 36.000 0.00 0.00 36.54 3.36
1767 1932 7.009179 TGATGAGGTCATGGTATATTCCTTC 57.991 40.000 0.00 0.00 36.57 3.46
1768 1933 5.825593 TGAGGTCATGGTATATTCCTTCC 57.174 43.478 0.00 0.00 0.00 3.46
1769 1934 4.283467 TGAGGTCATGGTATATTCCTTCCG 59.717 45.833 0.00 0.00 0.00 4.30
1770 1935 3.583086 AGGTCATGGTATATTCCTTCCGG 59.417 47.826 0.00 0.00 0.00 5.14
1771 1936 3.335579 GTCATGGTATATTCCTTCCGGC 58.664 50.000 0.00 0.00 0.00 6.13
1772 1937 3.008049 GTCATGGTATATTCCTTCCGGCT 59.992 47.826 0.00 0.00 0.00 5.52
1773 1938 3.650942 TCATGGTATATTCCTTCCGGCTT 59.349 43.478 0.00 0.00 0.00 4.35
1774 1939 3.485463 TGGTATATTCCTTCCGGCTTG 57.515 47.619 0.00 0.00 0.00 4.01
1775 1940 2.105821 TGGTATATTCCTTCCGGCTTGG 59.894 50.000 0.00 0.00 40.09 3.61
1776 1941 2.152016 GTATATTCCTTCCGGCTTGGC 58.848 52.381 0.00 0.00 37.80 4.52
1777 1942 0.846693 ATATTCCTTCCGGCTTGGCT 59.153 50.000 0.00 0.00 37.80 4.75
1778 1943 0.623723 TATTCCTTCCGGCTTGGCTT 59.376 50.000 0.00 0.00 37.80 4.35
1779 1944 0.967380 ATTCCTTCCGGCTTGGCTTG 60.967 55.000 0.00 0.00 37.80 4.01
1780 1945 2.282462 CCTTCCGGCTTGGCTTGT 60.282 61.111 0.00 0.00 37.80 3.16
1781 1946 2.335712 CCTTCCGGCTTGGCTTGTC 61.336 63.158 0.00 0.00 37.80 3.18
1782 1947 1.302832 CTTCCGGCTTGGCTTGTCT 60.303 57.895 0.00 0.00 37.80 3.41
1783 1948 0.890996 CTTCCGGCTTGGCTTGTCTT 60.891 55.000 0.00 0.00 37.80 3.01
1784 1949 0.467290 TTCCGGCTTGGCTTGTCTTT 60.467 50.000 0.00 0.00 37.80 2.52
1785 1950 1.172180 TCCGGCTTGGCTTGTCTTTG 61.172 55.000 0.00 0.00 37.80 2.77
1786 1951 1.372128 CGGCTTGGCTTGTCTTTGC 60.372 57.895 0.00 0.00 0.00 3.68
1787 1952 1.799258 CGGCTTGGCTTGTCTTTGCT 61.799 55.000 0.00 0.00 0.00 3.91
1788 1953 0.390492 GGCTTGGCTTGTCTTTGCTT 59.610 50.000 0.00 0.00 0.00 3.91
1789 1954 1.202568 GGCTTGGCTTGTCTTTGCTTT 60.203 47.619 0.00 0.00 0.00 3.51
1790 1955 1.862827 GCTTGGCTTGTCTTTGCTTTG 59.137 47.619 0.00 0.00 0.00 2.77
1791 1956 1.862827 CTTGGCTTGTCTTTGCTTTGC 59.137 47.619 0.00 0.00 0.00 3.68
1792 1957 1.113788 TGGCTTGTCTTTGCTTTGCT 58.886 45.000 0.00 0.00 0.00 3.91
1793 1958 1.481772 TGGCTTGTCTTTGCTTTGCTT 59.518 42.857 0.00 0.00 0.00 3.91
1794 1959 2.093553 TGGCTTGTCTTTGCTTTGCTTT 60.094 40.909 0.00 0.00 0.00 3.51
1795 1960 2.938451 GGCTTGTCTTTGCTTTGCTTTT 59.062 40.909 0.00 0.00 0.00 2.27
1824 1989 3.009723 ACGATTTGATTTGACGAGGCAT 58.990 40.909 0.00 0.00 0.00 4.40
1828 1993 1.089112 TGATTTGACGAGGCATGCAG 58.911 50.000 21.36 12.58 0.00 4.41
1829 1994 0.379669 GATTTGACGAGGCATGCAGG 59.620 55.000 21.36 10.15 0.00 4.85
1837 2002 2.271497 GGCATGCAGGCACTCTCT 59.729 61.111 26.25 0.00 43.51 3.10
1838 2003 2.113433 GGCATGCAGGCACTCTCTG 61.113 63.158 26.25 0.00 43.51 3.35
1839 2004 2.113433 GCATGCAGGCACTCTCTGG 61.113 63.158 20.11 0.00 34.60 3.86
1840 2005 2.113433 CATGCAGGCACTCTCTGGC 61.113 63.158 0.00 0.00 46.14 4.85
1874 2039 4.187694 GAGAGAAAATGAGATTCCACGCT 58.812 43.478 0.00 0.00 0.00 5.07
1875 2040 3.937706 AGAGAAAATGAGATTCCACGCTG 59.062 43.478 0.00 0.00 0.00 5.18
1914 2079 2.203972 TTTTCGTCCTCGGCGATCGT 62.204 55.000 17.81 0.00 38.21 3.73
1917 2082 2.222217 CGTCCTCGGCGATCGTTTC 61.222 63.158 17.81 6.11 40.32 2.78
1958 2123 4.116328 CAGCTTCGTCTCGGGCGA 62.116 66.667 0.00 0.00 36.51 5.54
2004 2169 2.172483 GACGCCCTGACATGACCAGT 62.172 60.000 0.00 0.00 0.00 4.00
2027 2192 1.004504 GCGTTTCTCCATGATTCGAGC 60.005 52.381 0.00 0.00 0.00 5.03
2059 2225 1.448540 GCTAGCTGCGCTTTCCTGA 60.449 57.895 9.73 0.00 40.44 3.86
2069 2235 0.519077 GCTTTCCTGACCGAGCTTTG 59.481 55.000 0.00 0.00 32.54 2.77
2118 2284 0.181587 TTTTCCCTTGCGTGTCCTCA 59.818 50.000 0.00 0.00 0.00 3.86
2186 2353 3.545703 ACTGCCACTCCATTTATGCTAC 58.454 45.455 0.00 0.00 0.00 3.58
2187 2354 2.880890 CTGCCACTCCATTTATGCTACC 59.119 50.000 0.00 0.00 0.00 3.18
2188 2355 2.509548 TGCCACTCCATTTATGCTACCT 59.490 45.455 0.00 0.00 0.00 3.08
2189 2356 3.053693 TGCCACTCCATTTATGCTACCTT 60.054 43.478 0.00 0.00 0.00 3.50
2190 2357 3.316308 GCCACTCCATTTATGCTACCTTG 59.684 47.826 0.00 0.00 0.00 3.61
2191 2358 3.885297 CCACTCCATTTATGCTACCTTGG 59.115 47.826 0.00 0.00 0.00 3.61
2192 2359 3.316308 CACTCCATTTATGCTACCTTGGC 59.684 47.826 0.00 0.00 0.00 4.52
2245 2424 3.508648 TGTTTTCGATCGGTTTTCGTC 57.491 42.857 16.41 0.00 40.32 4.20
2251 2430 3.581755 TCGATCGGTTTTCGTCAGAAAT 58.418 40.909 16.41 0.00 44.82 2.17
2263 2442 5.046910 TCGTCAGAAATTTTGGAGCAATC 57.953 39.130 0.00 0.00 0.00 2.67
2267 2446 5.570589 GTCAGAAATTTTGGAGCAATCTTCG 59.429 40.000 0.00 0.00 0.00 3.79
2271 2450 1.821216 TTTGGAGCAATCTTCGGGTC 58.179 50.000 0.00 0.00 0.00 4.46
2278 2457 3.077359 AGCAATCTTCGGGTCTCAAAAG 58.923 45.455 0.00 0.00 0.00 2.27
2279 2458 3.074412 GCAATCTTCGGGTCTCAAAAGA 58.926 45.455 0.00 0.00 32.69 2.52
2280 2459 3.691609 GCAATCTTCGGGTCTCAAAAGAT 59.308 43.478 0.00 0.00 39.52 2.40
2281 2460 4.156739 GCAATCTTCGGGTCTCAAAAGATT 59.843 41.667 4.84 4.84 44.94 2.40
2282 2461 5.335976 GCAATCTTCGGGTCTCAAAAGATTT 60.336 40.000 7.15 0.00 42.75 2.17
2283 2462 6.317857 CAATCTTCGGGTCTCAAAAGATTTC 58.682 40.000 7.15 0.00 42.75 2.17
2284 2463 3.994392 TCTTCGGGTCTCAAAAGATTTCG 59.006 43.478 0.00 0.00 33.08 3.46
2285 2464 3.396260 TCGGGTCTCAAAAGATTTCGT 57.604 42.857 0.00 0.00 33.08 3.85
2286 2465 3.064207 TCGGGTCTCAAAAGATTTCGTG 58.936 45.455 0.00 0.00 33.08 4.35
2287 2466 2.159627 CGGGTCTCAAAAGATTTCGTGG 59.840 50.000 0.00 0.00 33.08 4.94
2288 2467 3.408634 GGGTCTCAAAAGATTTCGTGGA 58.591 45.455 0.00 0.00 33.08 4.02
2289 2468 3.818773 GGGTCTCAAAAGATTTCGTGGAA 59.181 43.478 0.00 0.00 33.08 3.53
2290 2469 4.320275 GGGTCTCAAAAGATTTCGTGGAAC 60.320 45.833 0.00 0.00 33.08 3.62
2291 2470 4.515567 GGTCTCAAAAGATTTCGTGGAACT 59.484 41.667 0.00 0.00 33.08 3.01
2292 2471 5.008712 GGTCTCAAAAGATTTCGTGGAACTT 59.991 40.000 0.00 0.00 33.08 2.66
2293 2472 6.459710 GGTCTCAAAAGATTTCGTGGAACTTT 60.460 38.462 0.00 0.00 33.08 2.66
2294 2473 6.972901 GTCTCAAAAGATTTCGTGGAACTTTT 59.027 34.615 0.00 0.00 40.02 2.27
2295 2474 7.488150 GTCTCAAAAGATTTCGTGGAACTTTTT 59.512 33.333 0.00 0.00 38.26 1.94
2310 2489 3.723554 TTTTTGCGGCAAGTTTCGT 57.276 42.105 15.78 0.00 0.00 3.85
2311 2490 1.272781 TTTTTGCGGCAAGTTTCGTG 58.727 45.000 15.78 0.00 0.00 4.35
2312 2491 0.526524 TTTTGCGGCAAGTTTCGTGG 60.527 50.000 15.78 0.00 0.00 4.94
2313 2492 1.377366 TTTGCGGCAAGTTTCGTGGA 61.377 50.000 15.78 0.00 0.00 4.02
2314 2493 1.377366 TTGCGGCAAGTTTCGTGGAA 61.377 50.000 12.11 0.00 0.00 3.53
2315 2494 1.169661 TGCGGCAAGTTTCGTGGAAT 61.170 50.000 0.00 0.00 0.00 3.01
2316 2495 0.039527 GCGGCAAGTTTCGTGGAATT 60.040 50.000 0.00 0.00 0.00 2.17
2317 2496 1.601914 GCGGCAAGTTTCGTGGAATTT 60.602 47.619 0.00 0.00 0.00 1.82
2318 2497 2.738135 CGGCAAGTTTCGTGGAATTTT 58.262 42.857 0.00 0.00 0.00 1.82
2319 2498 3.120041 CGGCAAGTTTCGTGGAATTTTT 58.880 40.909 0.00 0.00 0.00 1.94
2371 2551 5.861222 ATTTTGATTCGATTTGGTTTGGC 57.139 34.783 0.00 0.00 0.00 4.52
2782 2968 2.492090 GACGTCAGGCTGCTCGAT 59.508 61.111 28.08 17.10 0.00 3.59
2886 3076 7.721286 AGTATTTGCTAGTACTGATGATTGC 57.279 36.000 5.39 0.00 30.35 3.56
2934 3124 0.809385 ACTGACAGCAATGCATCTGC 59.191 50.000 19.73 19.73 40.24 4.26
2935 3125 0.248094 CTGACAGCAATGCATCTGCG 60.248 55.000 20.58 18.09 44.75 5.18
2937 3127 0.247974 GACAGCAATGCATCTGCGTC 60.248 55.000 23.91 23.91 44.75 5.19
2945 3135 2.503061 CATCTGCGTCCTCCCTGG 59.497 66.667 0.00 0.00 37.10 4.45
3006 3196 2.131776 ACTCGGTCGAGGATCTTCTT 57.868 50.000 21.99 0.00 45.88 2.52
3054 3244 3.748048 CCATCACTAAACTCACACACAGG 59.252 47.826 0.00 0.00 0.00 4.00
3123 3397 0.249573 CCAAACTGCAACTTGCCTGG 60.250 55.000 11.29 8.65 44.23 4.45
3247 3521 1.676635 GCAATGCTGCTCCTGGTGA 60.677 57.895 0.00 0.00 45.74 4.02
3330 3604 5.297547 TCAATCTACAACTCTGTTGTGGAC 58.702 41.667 24.32 0.00 41.51 4.02
3366 3640 2.291865 TGGAGAGGCTTCAGCTAGAGAA 60.292 50.000 0.00 0.00 41.70 2.87
3375 3649 3.815856 TCAGCTAGAGAAGGCAATGAG 57.184 47.619 0.00 0.00 0.00 2.90
3433 3707 1.638529 TAACCAATTTGGGGCCACAG 58.361 50.000 19.39 0.00 43.37 3.66
3434 3708 0.399806 AACCAATTTGGGGCCACAGT 60.400 50.000 19.39 0.00 43.37 3.55
3521 3795 5.277058 CGATTGCTCTTAGTTTCATGCTACC 60.277 44.000 0.00 0.00 0.00 3.18
3711 6442 4.756502 ACTGAGGTCTACGCCTTATTTTC 58.243 43.478 0.00 0.00 39.34 2.29
3723 6454 4.435651 CGCCTTATTTTCCGTGAAGACTTC 60.436 45.833 8.34 8.34 0.00 3.01
3827 6759 8.584157 TCTTAAGTTTGGTTGATGCAATATTGT 58.416 29.630 16.61 0.00 0.00 2.71
4302 10219 7.133891 AGTTAAGTGAGTAATCAATGTGTGC 57.866 36.000 0.00 0.00 0.00 4.57
4317 10234 1.888512 GTGTGCAATTGAGGTCCACAT 59.111 47.619 10.34 0.00 38.50 3.21
4329 10246 6.001449 TGAGGTCCACATCTTATTTTAGGG 57.999 41.667 0.00 0.00 0.00 3.53
4332 10249 6.663734 AGGTCCACATCTTATTTTAGGGAAG 58.336 40.000 0.00 0.00 0.00 3.46
4338 10255 7.366011 CCACATCTTATTTTAGGGAAGACTCCT 60.366 40.741 0.00 0.00 42.05 3.69
4430 10347 5.026462 CAGCTCTGCATTTTCTTATGTTCG 58.974 41.667 0.00 0.00 0.00 3.95
4592 10515 5.882557 ACATGAAATTAGTTGCTAGGACTGG 59.117 40.000 0.00 0.00 0.00 4.00
4603 10526 3.263170 TGCTAGGACTGGCATGAAGTTTA 59.737 43.478 6.25 0.00 42.20 2.01
5002 10942 9.581099 AAACTGTACCATTAAAAACACTTCTTG 57.419 29.630 0.00 0.00 0.00 3.02
5022 10962 7.765695 TCTTGAAAATTCTGCTCCATTAACT 57.234 32.000 0.00 0.00 0.00 2.24
5227 11168 6.273071 CCTTTGTTACTTCCTTTTCAAGTGG 58.727 40.000 0.00 0.00 35.63 4.00
5231 11172 7.941431 TGTTACTTCCTTTTCAAGTGGTTAA 57.059 32.000 0.00 0.00 35.63 2.01
5232 11173 8.528044 TGTTACTTCCTTTTCAAGTGGTTAAT 57.472 30.769 0.00 0.00 35.63 1.40
5423 11384 1.607467 CCCCAAAGCCCAGAACCTG 60.607 63.158 0.00 0.00 0.00 4.00
5729 11699 9.480053 CCATAGTTTTGTGTTTGATTCTTCAAT 57.520 29.630 0.00 0.00 41.38 2.57
5763 11733 9.053840 CATGTTCTGCTATAAGATCACATTCTT 57.946 33.333 0.00 0.00 39.28 2.52
5777 11747 9.270640 AGATCACATTCTTCTATGTTCTATTGC 57.729 33.333 0.00 0.00 36.64 3.56
6022 11994 6.796705 TCTGGATGATGATTTCGATGATTG 57.203 37.500 0.00 0.00 0.00 2.67
6093 12065 1.324383 TTTTCGAAAAGGGGTCAGGC 58.676 50.000 19.08 0.00 0.00 4.85
6094 12066 0.538746 TTTCGAAAAGGGGTCAGGCC 60.539 55.000 8.44 0.00 0.00 5.19
6246 12244 4.507157 GGGTTAAAAGTAAGGGCCACAGTA 60.507 45.833 6.18 0.00 0.00 2.74
6260 12258 0.323957 ACAGTACCCCGAAAGAAGGC 59.676 55.000 0.00 0.00 0.00 4.35
6292 12290 2.232452 CTCGGGTAATCTAGGCATCCTG 59.768 54.545 0.00 0.00 34.61 3.86
6315 12315 7.707035 CCTGTATCTGTATTACCAAGTGACTTC 59.293 40.741 0.00 0.00 0.00 3.01
6320 12320 8.603242 TCTGTATTACCAAGTGACTTCTTTTC 57.397 34.615 0.00 0.00 0.00 2.29
6448 12448 7.829706 TCAGTAGACGATGGTATAGCTTCATAT 59.170 37.037 15.59 3.16 0.00 1.78
6820 12820 2.027377 AGTGAGCTGGAGGATGAACAAG 60.027 50.000 0.00 0.00 0.00 3.16
6840 12840 5.945784 ACAAGCTGAGCAATATAACTTTGGA 59.054 36.000 7.39 0.00 0.00 3.53
6873 12873 2.581354 CCAGAGAAGCACCTCCCG 59.419 66.667 2.27 0.00 33.76 5.14
6930 12930 2.099141 TTCTCATGGAAGCAACCGAG 57.901 50.000 0.00 0.00 0.00 4.63
7059 13065 2.844362 CGCTCCCTCCCTGGCATA 60.844 66.667 0.00 0.00 0.00 3.14
7122 13128 0.846693 ATATGGTCCTTCTGCCACCC 59.153 55.000 0.00 0.00 37.62 4.61
7152 13158 2.423538 GCCAAAGTATGTACCCTTGCTG 59.576 50.000 0.00 0.00 0.00 4.41
7272 13278 4.428209 CTTATAGCACTGACAGTCCACAG 58.572 47.826 4.74 0.00 39.65 3.66
7323 13329 1.212195 AGCCAGCATGATGATGAGTGT 59.788 47.619 13.69 0.00 39.69 3.55
7452 13458 4.421948 CTGCAAGAAAGCCTGATTTGATC 58.578 43.478 0.00 0.00 34.07 2.92
7462 13468 3.193263 CCTGATTTGATCGTGTCTGGAG 58.807 50.000 9.79 0.00 33.13 3.86
7472 13478 0.248843 GTGTCTGGAGCTCTTCCTGG 59.751 60.000 14.64 0.00 46.92 4.45
7499 13507 2.334838 CGAACAAGGACCGTTAAGGAG 58.665 52.381 0.00 0.00 45.00 3.69
7564 13585 2.649742 TGAATCCAGTCCTCCTCCTT 57.350 50.000 0.00 0.00 0.00 3.36
7565 13586 2.472029 TGAATCCAGTCCTCCTCCTTC 58.528 52.381 0.00 0.00 0.00 3.46
7566 13587 2.045047 TGAATCCAGTCCTCCTCCTTCT 59.955 50.000 0.00 0.00 0.00 2.85
7567 13588 2.470057 ATCCAGTCCTCCTCCTTCTC 57.530 55.000 0.00 0.00 0.00 2.87
7568 13589 0.336737 TCCAGTCCTCCTCCTTCTCC 59.663 60.000 0.00 0.00 0.00 3.71
7569 13590 0.338120 CCAGTCCTCCTCCTTCTCCT 59.662 60.000 0.00 0.00 0.00 3.69
7570 13591 1.687996 CCAGTCCTCCTCCTTCTCCTC 60.688 61.905 0.00 0.00 0.00 3.71
7571 13592 0.634465 AGTCCTCCTCCTTCTCCTCC 59.366 60.000 0.00 0.00 0.00 4.30
7572 13593 0.634465 GTCCTCCTCCTTCTCCTCCT 59.366 60.000 0.00 0.00 0.00 3.69
7818 13843 3.768215 GGGACAAGTACCTAGTAAGTGCT 59.232 47.826 0.00 0.00 0.00 4.40
7829 13854 4.098807 CCTAGTAAGTGCTCCCTTCTTCTC 59.901 50.000 0.00 0.00 0.00 2.87
7835 13860 2.050144 TGCTCCCTTCTTCTCTTGTGT 58.950 47.619 0.00 0.00 0.00 3.72
7836 13861 2.439507 TGCTCCCTTCTTCTCTTGTGTT 59.560 45.455 0.00 0.00 0.00 3.32
7837 13862 3.646162 TGCTCCCTTCTTCTCTTGTGTTA 59.354 43.478 0.00 0.00 0.00 2.41
7838 13863 3.997681 GCTCCCTTCTTCTCTTGTGTTAC 59.002 47.826 0.00 0.00 0.00 2.50
7839 13864 4.238514 CTCCCTTCTTCTCTTGTGTTACG 58.761 47.826 0.00 0.00 0.00 3.18
7851 13876 0.378962 GTGTTACGTTGCTTGCCACA 59.621 50.000 0.00 0.00 0.00 4.17
7889 13914 5.791367 ATCATGTCTTGATTCGTTGACTG 57.209 39.130 0.00 0.00 42.62 3.51
7898 13923 4.939271 TGATTCGTTGACTGACACACTTA 58.061 39.130 0.00 0.00 0.00 2.24
8137 14170 4.330250 TCTCAGCAGCTAAAATTTGCTCT 58.670 39.130 0.00 0.09 45.75 4.09
8158 14191 5.773575 TCTGCTGTTCTACTTTCACTACAG 58.226 41.667 0.00 0.00 36.85 2.74
8162 14195 4.307432 TGTTCTACTTTCACTACAGCTGC 58.693 43.478 15.27 0.00 0.00 5.25
8396 14429 5.048713 CACTTCAAGTTTGGTCCATAAGGTC 60.049 44.000 0.00 0.00 35.89 3.85
8430 14463 9.926158 CTAATACCGAAGACTGATCTAGTAGTA 57.074 37.037 0.00 0.00 40.53 1.82
8433 14466 7.499321 ACCGAAGACTGATCTAGTAGTAATG 57.501 40.000 0.00 0.00 40.53 1.90
8708 14749 3.564225 CCCCCTTTGTTATCTGTTATCGC 59.436 47.826 0.00 0.00 0.00 4.58
8822 14864 3.008835 TGCAGCTTTCTGATATGCCTT 57.991 42.857 0.00 0.00 42.95 4.35
8999 15386 2.427095 GGGTCAAGTTTCACTGCTTGTT 59.573 45.455 0.00 0.00 41.83 2.83
9000 15387 3.489229 GGGTCAAGTTTCACTGCTTGTTC 60.489 47.826 0.00 0.00 41.83 3.18
9001 15388 3.378427 GGTCAAGTTTCACTGCTTGTTCT 59.622 43.478 0.00 0.00 41.83 3.01
9002 15389 4.142381 GGTCAAGTTTCACTGCTTGTTCTT 60.142 41.667 0.00 0.00 41.83 2.52
9003 15390 5.030936 GTCAAGTTTCACTGCTTGTTCTTC 58.969 41.667 0.00 0.00 41.83 2.87
9004 15391 3.951979 AGTTTCACTGCTTGTTCTTCG 57.048 42.857 0.00 0.00 0.00 3.79
9005 15392 2.032178 AGTTTCACTGCTTGTTCTTCGC 59.968 45.455 0.00 0.00 0.00 4.70
9008 15395 0.940126 CACTGCTTGTTCTTCGCACT 59.060 50.000 0.00 0.00 0.00 4.40
9009 15396 0.940126 ACTGCTTGTTCTTCGCACTG 59.060 50.000 0.00 0.00 0.00 3.66
9010 15397 0.385223 CTGCTTGTTCTTCGCACTGC 60.385 55.000 0.00 0.00 0.00 4.40
9011 15398 0.815213 TGCTTGTTCTTCGCACTGCT 60.815 50.000 0.00 0.00 0.00 4.24
9186 15802 2.260844 TAATCTATGGGTGCAGCAGC 57.739 50.000 19.06 16.66 42.57 5.25
9206 15822 3.129638 AGCATGTTCTACTCTCTCCGTTC 59.870 47.826 0.00 0.00 0.00 3.95
9290 15906 0.321919 TGCTCACTCATTGCAGTCCC 60.322 55.000 0.00 0.00 32.55 4.46
9345 15961 5.046591 TCTCATATTTGTGAACGGAAGGAGT 60.047 40.000 0.00 0.00 0.00 3.85
9349 15965 5.880054 ATTTGTGAACGGAAGGAGTATTG 57.120 39.130 0.00 0.00 0.00 1.90
9363 15979 7.363007 GGAAGGAGTATTGGAAATGGAAACTTC 60.363 40.741 0.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.008330 ACTACTACTCCTGTACGCTGTG 58.992 50.000 0.00 0.00 0.00 3.66
1 2 3.347077 ACTACTACTCCTGTACGCTGT 57.653 47.619 0.00 0.00 0.00 4.40
2 3 4.270566 CACTACTACTACTCCTGTACGCTG 59.729 50.000 0.00 0.00 0.00 5.18
3 4 4.440880 CACTACTACTACTCCTGTACGCT 58.559 47.826 0.00 0.00 0.00 5.07
4 5 3.559242 CCACTACTACTACTCCTGTACGC 59.441 52.174 0.00 0.00 0.00 4.42
5 6 4.764172 ACCACTACTACTACTCCTGTACG 58.236 47.826 0.00 0.00 0.00 3.67
6 7 5.751028 CGTACCACTACTACTACTCCTGTAC 59.249 48.000 0.00 0.00 0.00 2.90
7 8 5.656859 TCGTACCACTACTACTACTCCTGTA 59.343 44.000 0.00 0.00 0.00 2.74
8 9 4.467795 TCGTACCACTACTACTACTCCTGT 59.532 45.833 0.00 0.00 0.00 4.00
9 10 5.016051 TCGTACCACTACTACTACTCCTG 57.984 47.826 0.00 0.00 0.00 3.86
10 11 5.188751 AGTTCGTACCACTACTACTACTCCT 59.811 44.000 0.00 0.00 0.00 3.69
11 12 5.423886 AGTTCGTACCACTACTACTACTCC 58.576 45.833 0.00 0.00 0.00 3.85
12 13 5.522097 GGAGTTCGTACCACTACTACTACTC 59.478 48.000 0.00 0.00 0.00 2.59
13 14 5.046304 TGGAGTTCGTACCACTACTACTACT 60.046 44.000 4.16 0.00 0.00 2.57
14 15 5.178797 TGGAGTTCGTACCACTACTACTAC 58.821 45.833 4.16 0.00 0.00 2.73
15 16 5.420725 TGGAGTTCGTACCACTACTACTA 57.579 43.478 4.16 0.00 0.00 1.82
16 17 4.292186 TGGAGTTCGTACCACTACTACT 57.708 45.455 4.16 0.00 0.00 2.57
24 25 1.121378 TGTTGGTGGAGTTCGTACCA 58.879 50.000 0.00 0.00 42.40 3.25
78 79 4.631740 GGTTGGGTTGGGGTGGGG 62.632 72.222 0.00 0.00 0.00 4.96
91 95 0.179234 GGTTTGGGTTGGTTGGGTTG 59.821 55.000 0.00 0.00 0.00 3.77
95 99 1.740332 GACGGGTTTGGGTTGGTTGG 61.740 60.000 0.00 0.00 0.00 3.77
97 101 1.456145 GGACGGGTTTGGGTTGGTT 60.456 57.895 0.00 0.00 0.00 3.67
98 102 2.196502 GGACGGGTTTGGGTTGGT 59.803 61.111 0.00 0.00 0.00 3.67
100 104 2.196229 TGGGACGGGTTTGGGTTG 59.804 61.111 0.00 0.00 0.00 3.77
101 105 2.196502 GTGGGACGGGTTTGGGTT 59.803 61.111 0.00 0.00 0.00 4.11
102 106 4.259131 CGTGGGACGGGTTTGGGT 62.259 66.667 0.00 0.00 38.08 4.51
105 109 4.939368 TGGCGTGGGACGGGTTTG 62.939 66.667 0.00 0.00 42.82 2.93
106 110 4.941309 GTGGCGTGGGACGGGTTT 62.941 66.667 0.00 0.00 42.82 3.27
132 136 2.119484 TTGGGTAGAAGGTGGCGGTG 62.119 60.000 0.00 0.00 0.00 4.94
146 150 1.764454 GCCAGGGGTTTTGTTGGGT 60.764 57.895 0.00 0.00 0.00 4.51
148 152 1.471829 GGAGCCAGGGGTTTTGTTGG 61.472 60.000 0.00 0.00 0.00 3.77
150 154 1.152333 GGGAGCCAGGGGTTTTGTT 60.152 57.895 0.00 0.00 0.00 2.83
151 155 2.526110 GGGAGCCAGGGGTTTTGT 59.474 61.111 0.00 0.00 0.00 2.83
162 173 0.323451 CTAGGGTTTTGTGGGGAGCC 60.323 60.000 0.00 0.00 0.00 4.70
179 190 3.934962 TGCCAGTGTGCGGTGCTA 61.935 61.111 0.00 0.00 0.00 3.49
223 234 3.112709 GTTCAGTCGCTGACGGGC 61.113 66.667 8.73 0.00 40.46 6.13
236 247 0.106769 TTTCTGCTGGTGCCTGTTCA 60.107 50.000 0.00 0.00 38.71 3.18
241 252 0.538287 GGAGTTTTCTGCTGGTGCCT 60.538 55.000 0.00 0.00 38.71 4.75
242 253 1.527433 GGGAGTTTTCTGCTGGTGCC 61.527 60.000 0.00 0.00 38.36 5.01
246 257 1.160137 CTTCGGGAGTTTTCTGCTGG 58.840 55.000 0.00 0.00 43.47 4.85
280 291 2.234168 TCGTCGAGGAGAGAGAAAGAGA 59.766 50.000 3.17 0.00 0.00 3.10
285 296 0.745128 GGCTCGTCGAGGAGAGAGAA 60.745 60.000 33.11 0.00 36.65 2.87
286 297 1.153329 GGCTCGTCGAGGAGAGAGA 60.153 63.158 33.11 0.64 36.65 3.10
287 298 2.184167 GGGCTCGTCGAGGAGAGAG 61.184 68.421 33.11 15.92 36.65 3.20
288 299 2.124653 GGGCTCGTCGAGGAGAGA 60.125 66.667 33.11 6.78 36.65 3.10
517 538 1.714899 CCCGTTGCGTTCATGATCCC 61.715 60.000 0.00 0.00 0.00 3.85
520 541 0.608035 AACCCCGTTGCGTTCATGAT 60.608 50.000 0.00 0.00 0.00 2.45
524 545 2.592287 GGAACCCCGTTGCGTTCA 60.592 61.111 0.00 0.00 40.13 3.18
633 663 4.589675 TTTCGTGCCCCACCCCAC 62.590 66.667 0.00 0.00 0.00 4.61
634 664 4.278513 CTTTCGTGCCCCACCCCA 62.279 66.667 0.00 0.00 0.00 4.96
638 668 2.594592 ACAGCTTTCGTGCCCCAC 60.595 61.111 0.00 0.00 0.00 4.61
639 669 2.594303 CACAGCTTTCGTGCCCCA 60.594 61.111 0.00 0.00 0.00 4.96
674 710 2.755469 TAGTCGGTACCCACCCGC 60.755 66.667 6.25 0.00 45.09 6.13
716 756 1.662438 CCCTCTCTGCTCACCGTCTC 61.662 65.000 0.00 0.00 0.00 3.36
718 758 1.679305 TCCCTCTCTGCTCACCGTC 60.679 63.158 0.00 0.00 0.00 4.79
719 759 1.979693 GTCCCTCTCTGCTCACCGT 60.980 63.158 0.00 0.00 0.00 4.83
720 760 1.943116 CTGTCCCTCTCTGCTCACCG 61.943 65.000 0.00 0.00 0.00 4.94
721 761 1.612395 CCTGTCCCTCTCTGCTCACC 61.612 65.000 0.00 0.00 0.00 4.02
726 766 4.154347 CCGCCTGTCCCTCTCTGC 62.154 72.222 0.00 0.00 0.00 4.26
730 770 2.681778 CTGTCCGCCTGTCCCTCT 60.682 66.667 0.00 0.00 0.00 3.69
751 791 1.745115 GCCGCACTTATCCTGCACA 60.745 57.895 0.00 0.00 34.00 4.57
825 865 1.541672 CTCCTCCCCTCTCCTCTCC 59.458 68.421 0.00 0.00 0.00 3.71
909 949 3.573772 TTCCCGCTCGCTCACACAG 62.574 63.158 0.00 0.00 0.00 3.66
924 964 1.690985 CCCCTCTCCACCCTCTTCC 60.691 68.421 0.00 0.00 0.00 3.46
926 966 0.103876 AAACCCCTCTCCACCCTCTT 60.104 55.000 0.00 0.00 0.00 2.85
933 973 2.609610 CCCCGAAACCCCTCTCCA 60.610 66.667 0.00 0.00 0.00 3.86
947 987 2.438075 CTGCTCTGCTGCTTCCCC 60.438 66.667 0.00 0.00 0.00 4.81
948 988 2.438075 CCTGCTCTGCTGCTTCCC 60.438 66.667 0.00 0.00 0.00 3.97
951 991 2.672307 GCACCTGCTCTGCTGCTT 60.672 61.111 0.00 0.00 38.21 3.91
976 1017 2.815647 GGCCGGAGTCGCAGAAAG 60.816 66.667 5.05 0.00 39.69 2.62
1045 1086 0.454452 CGACACGCAGATGACGAAGA 60.454 55.000 0.00 0.00 39.60 2.87
1063 1104 0.454957 CAGGCGGAAACAAATCAGCG 60.455 55.000 0.00 0.00 40.79 5.18
1082 1123 1.209128 ATGGATCGAATCGAACACGC 58.791 50.000 10.12 0.00 39.99 5.34
1152 1194 1.948508 CGAGAGCTCATCGGAGAGG 59.051 63.158 17.77 0.00 44.26 3.69
1229 1271 5.163923 CCGAAAACGAAGGACCATTACTTAC 60.164 44.000 0.00 0.00 0.00 2.34
1230 1272 4.931002 CCGAAAACGAAGGACCATTACTTA 59.069 41.667 0.00 0.00 0.00 2.24
1231 1273 3.749609 CCGAAAACGAAGGACCATTACTT 59.250 43.478 0.00 0.00 0.00 2.24
1232 1274 3.244318 ACCGAAAACGAAGGACCATTACT 60.244 43.478 0.00 0.00 0.00 2.24
1257 1299 4.636435 ACCAACCCAGCCGAACCG 62.636 66.667 0.00 0.00 0.00 4.44
1258 1300 2.203437 AACCAACCCAGCCGAACC 60.203 61.111 0.00 0.00 0.00 3.62
1263 1305 2.561037 CCAACGAACCAACCCAGCC 61.561 63.158 0.00 0.00 0.00 4.85
1300 1343 0.683179 GGAGAAAACCCCCAATCCCG 60.683 60.000 0.00 0.00 0.00 5.14
1307 1350 2.239150 GAGAAGGTAGGAGAAAACCCCC 59.761 54.545 0.00 0.00 36.34 5.40
1332 1375 1.483004 ACCAAACCTTTGAAAACCCCG 59.517 47.619 0.00 0.00 40.55 5.73
1343 1386 4.653888 CGGCCGGGACCAAACCTT 62.654 66.667 20.10 0.00 0.00 3.50
1398 1442 1.284297 TGCAGACGCATGACAACGAG 61.284 55.000 8.09 0.00 45.36 4.18
1418 1462 2.224137 GGATCATGCAGACGAAGGATCA 60.224 50.000 0.00 0.00 34.34 2.92
1419 1463 2.036992 AGGATCATGCAGACGAAGGATC 59.963 50.000 0.00 0.00 0.00 3.36
1420 1464 2.045524 AGGATCATGCAGACGAAGGAT 58.954 47.619 0.00 0.00 0.00 3.24
1421 1465 1.489481 AGGATCATGCAGACGAAGGA 58.511 50.000 0.00 0.00 0.00 3.36
1422 1466 2.208431 GAAGGATCATGCAGACGAAGG 58.792 52.381 0.00 0.00 0.00 3.46
1423 1467 2.897436 TGAAGGATCATGCAGACGAAG 58.103 47.619 0.00 0.00 0.00 3.79
1424 1468 3.461061 GATGAAGGATCATGCAGACGAA 58.539 45.455 0.00 0.00 46.30 3.85
1425 1469 2.544486 CGATGAAGGATCATGCAGACGA 60.544 50.000 10.78 0.00 46.30 4.20
1426 1470 1.791204 CGATGAAGGATCATGCAGACG 59.209 52.381 0.00 0.00 46.30 4.18
1427 1471 1.530293 GCGATGAAGGATCATGCAGAC 59.470 52.381 0.00 0.00 46.30 3.51
1428 1472 1.870993 CGCGATGAAGGATCATGCAGA 60.871 52.381 0.00 0.00 46.30 4.26
1429 1473 0.511653 CGCGATGAAGGATCATGCAG 59.488 55.000 0.00 0.00 46.30 4.41
1430 1474 1.501337 GCGCGATGAAGGATCATGCA 61.501 55.000 12.10 0.00 46.30 3.96
1431 1475 1.206072 GCGCGATGAAGGATCATGC 59.794 57.895 12.10 0.00 46.30 4.06
1432 1476 0.788995 GAGCGCGATGAAGGATCATG 59.211 55.000 12.10 0.00 46.30 3.07
1455 1499 1.302192 AAACGGTGGGTCATGGACG 60.302 57.895 0.00 0.00 32.65 4.79
1456 1500 1.862602 GCAAACGGTGGGTCATGGAC 61.863 60.000 0.00 0.00 0.00 4.02
1464 1537 2.983592 GGGACAGCAAACGGTGGG 60.984 66.667 0.00 0.00 36.18 4.61
1537 1610 1.377333 GGAGGAGCAAAGGGTTCGG 60.377 63.158 0.00 0.00 0.00 4.30
1559 1632 0.676782 CAGGGGGAAAACTAGCACGG 60.677 60.000 0.00 0.00 0.00 4.94
1560 1633 0.676782 CCAGGGGGAAAACTAGCACG 60.677 60.000 0.00 0.00 35.59 5.34
1572 1645 3.253838 TGGACGGAAACCAGGGGG 61.254 66.667 0.00 0.00 41.29 5.40
1605 1678 1.438651 TTTGCAAAGAGGACGGATCG 58.561 50.000 8.05 0.00 0.00 3.69
1614 1690 3.655276 ACTTCCAGCATTTGCAAAGAG 57.345 42.857 18.19 13.31 45.16 2.85
1615 1691 5.528043 TTAACTTCCAGCATTTGCAAAGA 57.472 34.783 18.19 6.01 45.16 2.52
1616 1692 6.790285 AATTAACTTCCAGCATTTGCAAAG 57.210 33.333 18.19 10.61 45.16 2.77
1617 1693 6.017275 CCAAATTAACTTCCAGCATTTGCAAA 60.017 34.615 15.44 15.44 45.16 3.68
1642 1718 0.178973 ACCCCAAAGCAACACCTACC 60.179 55.000 0.00 0.00 0.00 3.18
1726 1891 0.462225 TCAAACGGCACCACGAAGAA 60.462 50.000 0.00 0.00 37.61 2.52
1727 1892 0.250124 ATCAAACGGCACCACGAAGA 60.250 50.000 0.00 0.00 37.61 2.87
1728 1893 0.110238 CATCAAACGGCACCACGAAG 60.110 55.000 0.00 0.00 37.61 3.79
1729 1894 0.533085 TCATCAAACGGCACCACGAA 60.533 50.000 0.00 0.00 37.61 3.85
1730 1895 0.948623 CTCATCAAACGGCACCACGA 60.949 55.000 0.00 0.00 37.61 4.35
1731 1896 1.497278 CTCATCAAACGGCACCACG 59.503 57.895 0.00 0.00 40.31 4.94
1732 1897 0.889186 ACCTCATCAAACGGCACCAC 60.889 55.000 0.00 0.00 0.00 4.16
1733 1898 0.605319 GACCTCATCAAACGGCACCA 60.605 55.000 0.00 0.00 0.00 4.17
1734 1899 0.605319 TGACCTCATCAAACGGCACC 60.605 55.000 0.00 0.00 33.02 5.01
1735 1900 1.131126 CATGACCTCATCAAACGGCAC 59.869 52.381 0.00 0.00 41.93 5.01
1736 1901 1.452110 CATGACCTCATCAAACGGCA 58.548 50.000 0.00 0.00 41.93 5.69
1737 1902 0.734889 CCATGACCTCATCAAACGGC 59.265 55.000 0.00 0.00 41.93 5.68
1738 1903 2.113860 ACCATGACCTCATCAAACGG 57.886 50.000 0.00 0.00 41.93 4.44
1739 1904 6.147821 GGAATATACCATGACCTCATCAAACG 59.852 42.308 0.00 0.00 41.93 3.60
1740 1905 7.227156 AGGAATATACCATGACCTCATCAAAC 58.773 38.462 0.00 0.00 41.93 2.93
1741 1906 7.392766 AGGAATATACCATGACCTCATCAAA 57.607 36.000 0.00 0.00 41.93 2.69
1742 1907 7.392766 AAGGAATATACCATGACCTCATCAA 57.607 36.000 0.00 0.00 41.93 2.57
1743 1908 6.013379 GGAAGGAATATACCATGACCTCATCA 60.013 42.308 0.00 0.00 43.13 3.07
1744 1909 6.410540 GGAAGGAATATACCATGACCTCATC 58.589 44.000 0.00 0.00 33.61 2.92
1745 1910 5.046304 CGGAAGGAATATACCATGACCTCAT 60.046 44.000 0.00 0.00 36.96 2.90
1746 1911 4.283467 CGGAAGGAATATACCATGACCTCA 59.717 45.833 0.00 0.00 0.00 3.86
1747 1912 4.822026 CGGAAGGAATATACCATGACCTC 58.178 47.826 0.00 0.00 0.00 3.85
1748 1913 4.891992 CGGAAGGAATATACCATGACCT 57.108 45.455 0.00 0.00 0.00 3.85
1764 1929 0.890996 AAGACAAGCCAAGCCGGAAG 60.891 55.000 5.05 0.00 36.56 3.46
1765 1930 0.467290 AAAGACAAGCCAAGCCGGAA 60.467 50.000 5.05 0.00 36.56 4.30
1766 1931 1.150536 AAAGACAAGCCAAGCCGGA 59.849 52.632 5.05 0.00 36.56 5.14
1767 1932 1.286880 CAAAGACAAGCCAAGCCGG 59.713 57.895 0.00 0.00 38.11 6.13
1768 1933 1.372128 GCAAAGACAAGCCAAGCCG 60.372 57.895 0.00 0.00 0.00 5.52
1769 1934 0.390492 AAGCAAAGACAAGCCAAGCC 59.610 50.000 0.00 0.00 0.00 4.35
1770 1935 1.862827 CAAAGCAAAGACAAGCCAAGC 59.137 47.619 0.00 0.00 0.00 4.01
1771 1936 1.862827 GCAAAGCAAAGACAAGCCAAG 59.137 47.619 0.00 0.00 0.00 3.61
1772 1937 1.481772 AGCAAAGCAAAGACAAGCCAA 59.518 42.857 0.00 0.00 0.00 4.52
1773 1938 1.113788 AGCAAAGCAAAGACAAGCCA 58.886 45.000 0.00 0.00 0.00 4.75
1774 1939 2.229675 AAGCAAAGCAAAGACAAGCC 57.770 45.000 0.00 0.00 0.00 4.35
1775 1940 3.867493 AGAAAAGCAAAGCAAAGACAAGC 59.133 39.130 0.00 0.00 0.00 4.01
1776 1941 6.245724 CAAAGAAAAGCAAAGCAAAGACAAG 58.754 36.000 0.00 0.00 0.00 3.16
1777 1942 5.122082 CCAAAGAAAAGCAAAGCAAAGACAA 59.878 36.000 0.00 0.00 0.00 3.18
1778 1943 4.630940 CCAAAGAAAAGCAAAGCAAAGACA 59.369 37.500 0.00 0.00 0.00 3.41
1779 1944 4.034394 CCCAAAGAAAAGCAAAGCAAAGAC 59.966 41.667 0.00 0.00 0.00 3.01
1780 1945 4.081198 TCCCAAAGAAAAGCAAAGCAAAGA 60.081 37.500 0.00 0.00 0.00 2.52
1781 1946 4.034394 GTCCCAAAGAAAAGCAAAGCAAAG 59.966 41.667 0.00 0.00 0.00 2.77
1782 1947 3.938334 GTCCCAAAGAAAAGCAAAGCAAA 59.062 39.130 0.00 0.00 0.00 3.68
1783 1948 3.530535 GTCCCAAAGAAAAGCAAAGCAA 58.469 40.909 0.00 0.00 0.00 3.91
1784 1949 2.481104 CGTCCCAAAGAAAAGCAAAGCA 60.481 45.455 0.00 0.00 0.00 3.91
1785 1950 2.127251 CGTCCCAAAGAAAAGCAAAGC 58.873 47.619 0.00 0.00 0.00 3.51
1786 1951 3.708563 TCGTCCCAAAGAAAAGCAAAG 57.291 42.857 0.00 0.00 0.00 2.77
1787 1952 4.664150 AATCGTCCCAAAGAAAAGCAAA 57.336 36.364 0.00 0.00 0.00 3.68
1788 1953 4.098654 TCAAATCGTCCCAAAGAAAAGCAA 59.901 37.500 0.00 0.00 0.00 3.91
1789 1954 3.634448 TCAAATCGTCCCAAAGAAAAGCA 59.366 39.130 0.00 0.00 0.00 3.91
1790 1955 4.237349 TCAAATCGTCCCAAAGAAAAGC 57.763 40.909 0.00 0.00 0.00 3.51
1791 1956 6.922957 TCAAATCAAATCGTCCCAAAGAAAAG 59.077 34.615 0.00 0.00 0.00 2.27
1792 1957 6.699642 GTCAAATCAAATCGTCCCAAAGAAAA 59.300 34.615 0.00 0.00 0.00 2.29
1793 1958 6.212955 GTCAAATCAAATCGTCCCAAAGAAA 58.787 36.000 0.00 0.00 0.00 2.52
1794 1959 5.561919 CGTCAAATCAAATCGTCCCAAAGAA 60.562 40.000 0.00 0.00 0.00 2.52
1795 1960 4.083537 CGTCAAATCAAATCGTCCCAAAGA 60.084 41.667 0.00 0.00 0.00 2.52
1824 1989 4.383861 CGCCAGAGAGTGCCTGCA 62.384 66.667 0.00 0.00 0.00 4.41
1842 2007 0.912486 ATTTTCTCTCCCTCCACCGG 59.088 55.000 0.00 0.00 0.00 5.28
1843 2008 1.555075 TCATTTTCTCTCCCTCCACCG 59.445 52.381 0.00 0.00 0.00 4.94
1844 2009 2.840651 TCTCATTTTCTCTCCCTCCACC 59.159 50.000 0.00 0.00 0.00 4.61
1874 2039 1.948104 CTTTCCGGTTATGATCGGCA 58.052 50.000 3.88 0.00 45.31 5.69
1875 2040 0.586802 GCTTTCCGGTTATGATCGGC 59.413 55.000 3.88 0.00 45.31 5.54
1914 2079 2.444700 GAACTGCTCCCCGTCCGAAA 62.445 60.000 0.00 0.00 0.00 3.46
1917 2082 4.452733 GGAACTGCTCCCCGTCCG 62.453 72.222 0.00 0.00 38.44 4.79
1920 2085 0.250770 GAAAAGGAACTGCTCCCCGT 60.251 55.000 0.00 0.00 46.81 5.28
1922 2087 2.962882 GGAAAAGGAACTGCTCCCC 58.037 57.895 0.00 0.00 46.81 4.81
1971 2136 2.726180 CGTCGATCGATCACGGGC 60.726 66.667 27.78 14.77 42.86 6.13
2004 2169 2.094234 TCGAATCATGGAGAAACGCAGA 60.094 45.455 0.00 0.00 0.00 4.26
2027 2192 1.299014 CTAGCAGGCTCTCGCTTCG 60.299 63.158 2.95 0.00 39.70 3.79
2059 2225 1.179814 AGACTCGACCAAAGCTCGGT 61.180 55.000 7.48 7.48 40.30 4.69
2069 2235 2.062519 GAAGAACAAGCAGACTCGACC 58.937 52.381 0.00 0.00 0.00 4.79
2074 2240 1.869767 CGCAAGAAGAACAAGCAGACT 59.130 47.619 0.00 0.00 43.02 3.24
2118 2284 0.693049 ACTGGAAACTGGATCGCCTT 59.307 50.000 0.00 0.00 34.31 4.35
2186 2353 2.221906 GACAATGCAGCCAGCCAAGG 62.222 60.000 0.00 0.00 44.83 3.61
2187 2354 1.214589 GACAATGCAGCCAGCCAAG 59.785 57.895 0.00 0.00 44.83 3.61
2188 2355 2.277591 GGACAATGCAGCCAGCCAA 61.278 57.895 0.00 0.00 44.83 4.52
2189 2356 2.677524 GGACAATGCAGCCAGCCA 60.678 61.111 0.00 0.00 44.83 4.75
2190 2357 3.455469 GGGACAATGCAGCCAGCC 61.455 66.667 0.00 0.00 44.83 4.85
2191 2358 2.677524 TGGGACAATGCAGCCAGC 60.678 61.111 0.00 0.00 39.03 4.85
2245 2424 4.860907 CCGAAGATTGCTCCAAAATTTCTG 59.139 41.667 0.00 0.00 0.00 3.02
2251 2430 2.159382 GACCCGAAGATTGCTCCAAAA 58.841 47.619 0.00 0.00 0.00 2.44
2263 2442 3.746492 ACGAAATCTTTTGAGACCCGAAG 59.254 43.478 0.00 0.00 0.00 3.79
2267 2446 3.408634 TCCACGAAATCTTTTGAGACCC 58.591 45.455 0.00 0.00 0.00 4.46
2271 2450 7.755582 AAAAAGTTCCACGAAATCTTTTGAG 57.244 32.000 0.00 0.00 38.03 3.02
2292 2471 1.272781 CACGAAACTTGCCGCAAAAA 58.727 45.000 7.33 0.00 0.00 1.94
2293 2472 0.526524 CCACGAAACTTGCCGCAAAA 60.527 50.000 7.33 0.00 0.00 2.44
2294 2473 1.064946 CCACGAAACTTGCCGCAAA 59.935 52.632 7.33 0.00 0.00 3.68
2295 2474 1.377366 TTCCACGAAACTTGCCGCAA 61.377 50.000 5.52 5.52 0.00 4.85
2296 2475 1.169661 ATTCCACGAAACTTGCCGCA 61.170 50.000 0.00 0.00 0.00 5.69
2297 2476 0.039527 AATTCCACGAAACTTGCCGC 60.040 50.000 0.00 0.00 0.00 6.53
2298 2477 2.415697 AAATTCCACGAAACTTGCCG 57.584 45.000 0.00 0.00 0.00 5.69
2343 2522 9.881529 CAAACCAAATCGAATCAAAATTCAAAT 57.118 25.926 0.00 0.00 41.22 2.32
2346 2525 6.073331 GCCAAACCAAATCGAATCAAAATTCA 60.073 34.615 0.00 0.00 41.22 2.57
2371 2551 2.758089 GCTCTGCACCATCCAAGCG 61.758 63.158 0.00 0.00 0.00 4.68
2886 3076 3.129113 TCAAATGGCATCGACCAAATGAG 59.871 43.478 0.00 0.00 44.65 2.90
2934 3124 3.259633 AAAGCAGCCAGGGAGGACG 62.260 63.158 0.00 0.00 41.22 4.79
2935 3125 1.377856 GAAAGCAGCCAGGGAGGAC 60.378 63.158 0.00 0.00 41.22 3.85
2937 3127 1.077858 GAGAAAGCAGCCAGGGAGG 60.078 63.158 0.00 0.00 41.84 4.30
2945 3135 1.809547 GAACCCTGAAGAGAAAGCAGC 59.190 52.381 0.00 0.00 0.00 5.25
3006 3196 4.935352 AACCTTTTGTTGCAGATAAGCA 57.065 36.364 0.00 0.00 43.99 3.91
3054 3244 5.763204 TCAACCATGTAAGAGAAGTTTGGAC 59.237 40.000 0.00 0.00 0.00 4.02
3123 3397 2.391616 TCAGATCCTGCACACACATC 57.608 50.000 0.00 0.00 0.00 3.06
3247 3521 1.341531 CGCCGATATCCTTTCCTCAGT 59.658 52.381 0.00 0.00 0.00 3.41
3330 3604 1.472878 TCTCCAATCGACAGAACCTCG 59.527 52.381 0.00 0.00 0.00 4.63
3366 3640 2.187239 TCCTCCTCATCTCATTGCCT 57.813 50.000 0.00 0.00 0.00 4.75
3375 3649 1.064832 AGCAAGGCTTTCCTCCTCATC 60.065 52.381 0.00 0.00 43.40 2.92
3433 3707 0.108019 ACTTTTCGGTCCCTCCACAC 59.892 55.000 0.00 0.00 35.57 3.82
3434 3708 0.841289 AACTTTTCGGTCCCTCCACA 59.159 50.000 0.00 0.00 35.57 4.17
3505 3779 8.739972 ACAATTTAAGGGTAGCATGAAACTAAG 58.260 33.333 0.00 0.00 0.00 2.18
3521 3795 9.942850 AAATTTGGGAATAGTGACAATTTAAGG 57.057 29.630 0.00 0.00 0.00 2.69
3548 3828 3.314763 CTGAATACTCAGTGCATTGCG 57.685 47.619 3.97 0.25 43.64 4.85
3711 6442 5.592054 TGCATAATCTAGAAGTCTTCACGG 58.408 41.667 14.97 4.58 0.00 4.94
3761 6492 9.736023 CTTCTTGATTATATAAACAAAGGGTGC 57.264 33.333 16.21 0.00 29.51 5.01
3806 6738 6.523840 ACAACAATATTGCATCAACCAAACT 58.476 32.000 15.48 0.00 0.00 2.66
4302 10219 8.408601 CCTAAAATAAGATGTGGACCTCAATTG 58.591 37.037 0.00 0.00 0.00 2.32
4384 10301 9.284594 GCTGCTTCGATAATACATAAAAACAAA 57.715 29.630 0.00 0.00 0.00 2.83
4419 10336 5.895636 ATTGCATCAACCGAACATAAGAA 57.104 34.783 0.00 0.00 0.00 2.52
4484 10405 6.166279 ACACTGAACACTCGATCATTGTAAT 58.834 36.000 7.68 0.00 36.48 1.89
4493 10414 5.455056 AGTAAAGACACTGAACACTCGAT 57.545 39.130 0.00 0.00 0.00 3.59
4494 10415 4.913335 AGTAAAGACACTGAACACTCGA 57.087 40.909 0.00 0.00 0.00 4.04
4495 10416 5.291128 ACAAAGTAAAGACACTGAACACTCG 59.709 40.000 0.00 0.00 0.00 4.18
4496 10417 6.456988 CCACAAAGTAAAGACACTGAACACTC 60.457 42.308 0.00 0.00 0.00 3.51
4497 10418 5.354234 CCACAAAGTAAAGACACTGAACACT 59.646 40.000 0.00 0.00 0.00 3.55
4499 10420 5.250200 ACCACAAAGTAAAGACACTGAACA 58.750 37.500 0.00 0.00 0.00 3.18
4502 10423 5.353394 AGACCACAAAGTAAAGACACTGA 57.647 39.130 0.00 0.00 0.00 3.41
4503 10424 6.018994 GTGTAGACCACAAAGTAAAGACACTG 60.019 42.308 0.00 0.00 43.92 3.66
4504 10425 6.047231 GTGTAGACCACAAAGTAAAGACACT 58.953 40.000 0.00 0.00 43.92 3.55
4629 10552 5.586155 TTCCTAAAATAAGGTGTGGACCA 57.414 39.130 0.00 0.00 45.98 4.02
4938 10878 3.444034 CCTGTGTGCTTGAGCTACTACTA 59.556 47.826 4.44 0.00 42.66 1.82
4991 10931 6.127366 TGGAGCAGAATTTTCAAGAAGTGTTT 60.127 34.615 0.00 0.00 0.00 2.83
4993 10933 4.889409 TGGAGCAGAATTTTCAAGAAGTGT 59.111 37.500 0.00 0.00 0.00 3.55
5002 10942 5.958955 AGCAGTTAATGGAGCAGAATTTTC 58.041 37.500 0.00 0.00 0.00 2.29
5022 10962 7.307160 CGAGAACAACAATCTTACTGTTTAGCA 60.307 37.037 0.00 0.00 34.80 3.49
5038 10978 4.213270 CACTTGGAAATAGCGAGAACAACA 59.787 41.667 0.00 0.00 0.00 3.33
5423 11384 6.903883 TTCTTCAGAAATATTACTCACCGC 57.096 37.500 0.00 0.00 0.00 5.68
5763 11733 9.102757 GAAACAGATCAAGCAATAGAACATAGA 57.897 33.333 0.00 0.00 0.00 1.98
5777 11747 7.361542 CCTTCCAGTGTAATGAAACAGATCAAG 60.362 40.741 0.00 0.00 32.06 3.02
5905 11877 7.687445 ACAAAATTCAGTTGAAAATGCAGTTC 58.313 30.769 0.00 2.71 37.61 3.01
6022 11994 8.612619 ACCTTTCATAATAATCGTCATTGTCAC 58.387 33.333 0.00 0.00 0.00 3.67
6073 12045 1.684450 GCCTGACCCCTTTTCGAAAAA 59.316 47.619 22.67 7.43 0.00 1.94
6074 12046 1.324383 GCCTGACCCCTTTTCGAAAA 58.676 50.000 21.35 21.35 0.00 2.29
6075 12047 0.538746 GGCCTGACCCCTTTTCGAAA 60.539 55.000 6.47 6.47 0.00 3.46
6076 12048 1.074248 GGCCTGACCCCTTTTCGAA 59.926 57.895 0.00 0.00 0.00 3.71
6077 12049 2.754375 GGCCTGACCCCTTTTCGA 59.246 61.111 0.00 0.00 0.00 3.71
6086 12058 2.047061 TGTACAGATATGGGCCTGACC 58.953 52.381 4.53 0.00 34.65 4.02
6087 12059 2.434336 TGTGTACAGATATGGGCCTGAC 59.566 50.000 4.53 0.00 34.65 3.51
6088 12060 2.758130 TGTGTACAGATATGGGCCTGA 58.242 47.619 4.53 0.00 34.65 3.86
6089 12061 3.558931 TTGTGTACAGATATGGGCCTG 57.441 47.619 4.53 0.00 36.53 4.85
6090 12062 4.796110 AATTGTGTACAGATATGGGCCT 57.204 40.909 4.53 0.00 0.00 5.19
6091 12063 4.451096 CGTAATTGTGTACAGATATGGGCC 59.549 45.833 0.00 0.00 0.00 5.80
6092 12064 5.050363 CACGTAATTGTGTACAGATATGGGC 60.050 44.000 0.00 0.00 35.12 5.36
6093 12065 6.277605 TCACGTAATTGTGTACAGATATGGG 58.722 40.000 0.00 0.00 40.74 4.00
6094 12066 7.764695 TTCACGTAATTGTGTACAGATATGG 57.235 36.000 0.00 0.00 40.74 2.74
6095 12067 9.636965 CATTTCACGTAATTGTGTACAGATATG 57.363 33.333 0.00 0.00 40.74 1.78
6096 12068 9.378551 ACATTTCACGTAATTGTGTACAGATAT 57.621 29.630 0.00 0.00 40.74 1.63
6097 12069 8.766000 ACATTTCACGTAATTGTGTACAGATA 57.234 30.769 0.00 0.00 40.74 1.98
6098 12070 7.667043 ACATTTCACGTAATTGTGTACAGAT 57.333 32.000 0.00 0.00 40.74 2.90
6099 12071 8.083462 TCTACATTTCACGTAATTGTGTACAGA 58.917 33.333 0.00 0.00 40.74 3.41
6100 12072 8.234887 TCTACATTTCACGTAATTGTGTACAG 57.765 34.615 0.00 0.00 40.74 2.74
6101 12073 8.083462 TCTCTACATTTCACGTAATTGTGTACA 58.917 33.333 0.00 0.00 40.74 2.90
6246 12244 3.658422 GGGGCCTTCTTTCGGGGT 61.658 66.667 0.84 0.00 0.00 4.95
6260 12258 5.242795 AGATTACCCGAGATAATTTGGGG 57.757 43.478 0.65 0.00 44.98 4.96
6292 12290 9.654663 AAAGAAGTCACTTGGTAATACAGATAC 57.345 33.333 0.00 0.00 0.00 2.24
6315 12315 8.506437 TGTAAGCAGATCATGTAAACAGAAAAG 58.494 33.333 0.00 0.00 0.00 2.27
6320 12320 7.132694 TGTTGTAAGCAGATCATGTAAACAG 57.867 36.000 0.00 0.00 0.00 3.16
6351 12351 8.097038 TCTCCCAGTGATCATTATGCTATAAAC 58.903 37.037 0.00 0.00 0.00 2.01
6370 12370 2.499289 AGTGTAGTCATGCTTCTCCCAG 59.501 50.000 0.00 0.00 0.00 4.45
6820 12820 6.251376 CGTTTTCCAAAGTTATATTGCTCAGC 59.749 38.462 0.00 0.00 0.00 4.26
6873 12873 5.819901 CCTCCTGAATATGAAGAACCAAGAC 59.180 44.000 0.00 0.00 0.00 3.01
6930 12930 1.275573 GGGTACTTCTCCCCATATCGC 59.724 57.143 0.00 0.00 40.88 4.58
7059 13065 0.179073 GGACTACACGCATCCTGCAT 60.179 55.000 0.00 0.00 45.36 3.96
7122 13128 3.356529 ACATACTTTGGCCTTGAGAGG 57.643 47.619 3.32 0.00 46.50 3.69
7152 13158 3.247006 TGATCAAACGAGTAAGGCTCC 57.753 47.619 0.00 0.00 41.10 4.70
7272 13278 2.825387 TCGCTGCATGCATCACCC 60.825 61.111 22.97 6.60 43.06 4.61
7292 13298 0.395311 ATGCTGGCTCTGGACATTGG 60.395 55.000 0.00 0.00 0.00 3.16
7323 13329 1.739466 CTTTCGCCATTGCTTCTGCTA 59.261 47.619 0.00 0.00 40.48 3.49
7452 13458 4.900154 GGAAGAGCTCCAGACACG 57.100 61.111 10.93 0.00 44.67 4.49
7462 13468 0.321653 TCGGCTTTTCCAGGAAGAGC 60.322 55.000 29.20 29.20 45.22 4.09
7472 13478 0.237498 CGGTCCTTGTTCGGCTTTTC 59.763 55.000 0.00 0.00 0.00 2.29
7499 13507 0.250513 AGACTCGACCAAATCAGGCC 59.749 55.000 0.00 0.00 0.00 5.19
7564 13585 0.336392 TCAGCCTTGCTAGGAGGAGA 59.664 55.000 19.07 6.33 45.05 3.71
7565 13586 1.422531 ATCAGCCTTGCTAGGAGGAG 58.577 55.000 19.07 4.04 45.05 3.69
7566 13587 1.885049 AATCAGCCTTGCTAGGAGGA 58.115 50.000 19.07 13.76 45.05 3.71
7567 13588 2.295885 CAAATCAGCCTTGCTAGGAGG 58.704 52.381 19.07 8.68 45.05 4.30
7568 13589 2.295885 CCAAATCAGCCTTGCTAGGAG 58.704 52.381 19.07 9.40 45.05 3.69
7569 13590 1.635487 ACCAAATCAGCCTTGCTAGGA 59.365 47.619 19.07 0.00 45.05 2.94
7570 13591 2.134789 ACCAAATCAGCCTTGCTAGG 57.865 50.000 10.15 10.15 45.02 3.02
7571 13592 3.084039 TGAACCAAATCAGCCTTGCTAG 58.916 45.455 0.00 0.00 36.40 3.42
7572 13593 3.084039 CTGAACCAAATCAGCCTTGCTA 58.916 45.455 0.00 0.00 40.31 3.49
7818 13843 3.640029 ACGTAACACAAGAGAAGAAGGGA 59.360 43.478 0.00 0.00 0.00 4.20
7829 13854 1.064803 TGGCAAGCAACGTAACACAAG 59.935 47.619 0.00 0.00 0.00 3.16
7835 13860 3.142951 ACTAATGTGGCAAGCAACGTAA 58.857 40.909 0.00 0.00 0.00 3.18
7836 13861 2.773487 ACTAATGTGGCAAGCAACGTA 58.227 42.857 0.00 0.00 0.00 3.57
7837 13862 1.604604 ACTAATGTGGCAAGCAACGT 58.395 45.000 0.00 0.00 0.00 3.99
7838 13863 2.704725 AACTAATGTGGCAAGCAACG 57.295 45.000 0.00 0.00 0.00 4.10
7839 13864 3.673323 GCCTAACTAATGTGGCAAGCAAC 60.673 47.826 0.00 0.00 44.34 4.17
7851 13876 7.372260 AGACATGATTCTGAGCCTAACTAAT 57.628 36.000 0.00 0.00 0.00 1.73
7879 13904 5.235616 GGAAATAAGTGTGTCAGTCAACGAA 59.764 40.000 0.00 0.00 0.00 3.85
7882 13907 5.277828 GGTGGAAATAAGTGTGTCAGTCAAC 60.278 44.000 0.00 0.00 0.00 3.18
7889 13914 5.638234 GTCTACAGGTGGAAATAAGTGTGTC 59.362 44.000 0.00 0.00 0.00 3.67
7898 13923 3.248024 TGTGGAGTCTACAGGTGGAAAT 58.752 45.455 5.04 0.00 0.00 2.17
8158 14191 2.690786 TCAGGCAAAATTGAATGCAGC 58.309 42.857 11.73 0.00 44.32 5.25
8162 14195 9.929722 CAATTAATCATCAGGCAAAATTGAATG 57.070 29.630 0.00 0.00 35.76 2.67
8396 14429 4.216687 CAGTCTTCGGTATTAGGGAGCTAG 59.783 50.000 0.00 0.00 0.00 3.42
8430 14463 2.816087 CGCCTGCCTTATTCTATGCATT 59.184 45.455 3.54 0.00 32.53 3.56
8433 14466 2.169832 TCGCCTGCCTTATTCTATGC 57.830 50.000 0.00 0.00 0.00 3.14
8582 14622 4.018050 ACCATCAAGCATCTAGGAAAAGGT 60.018 41.667 0.00 0.00 0.00 3.50
8708 14749 3.589988 ACATAGGTTCAGTGAAAGAGCG 58.410 45.455 7.25 0.00 0.00 5.03
8822 14864 4.022935 CCATACAAAAGAGAAGCAAGCACA 60.023 41.667 0.00 0.00 0.00 4.57
9009 15396 5.857997 GATCATTATCACAGCTCCAGCAGC 61.858 50.000 0.48 0.00 39.09 5.25
9010 15397 3.189618 TCATTATCACAGCTCCAGCAG 57.810 47.619 0.48 0.00 45.16 4.24
9011 15398 3.495629 GGATCATTATCACAGCTCCAGCA 60.496 47.826 0.48 0.00 37.40 4.41
9022 15409 4.306391 TCCACCCTGAAGGATCATTATCA 58.694 43.478 0.00 0.00 39.89 2.15
9186 15802 4.082733 TGTGAACGGAGAGAGTAGAACATG 60.083 45.833 0.00 0.00 0.00 3.21
9256 15872 5.356751 TGAGTGAGCAAACACACTAAAATGT 59.643 36.000 0.00 0.00 46.12 2.71
9258 15874 6.639632 ATGAGTGAGCAAACACACTAAAAT 57.360 33.333 0.00 0.00 46.12 1.82
9310 15926 9.079833 GTTCACAAATATGAGATGTTTTGGATG 57.920 33.333 0.00 0.00 34.23 3.51
9345 15961 8.160765 TCACAGTAGAAGTTTCCATTTCCAATA 58.839 33.333 0.00 0.00 0.00 1.90
9349 15965 6.710744 TCTTCACAGTAGAAGTTTCCATTTCC 59.289 38.462 10.65 0.00 44.18 3.13
9363 15979 6.148315 TGCAGATCAAACAATCTTCACAGTAG 59.852 38.462 0.00 0.00 33.68 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.