Multiple sequence alignment - TraesCS5A01G079100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G079100 chr5A 100.000 3094 0 0 1 3094 98428421 98431514 0.000000e+00 5714.0
1 TraesCS5A01G079100 chr5A 98.187 386 6 1 2710 3094 622121400 622121015 0.000000e+00 673.0
2 TraesCS5A01G079100 chr5A 100.000 36 0 0 2483 2518 98430859 98430894 1.990000e-07 67.6
3 TraesCS5A01G079100 chr5A 100.000 36 0 0 2439 2474 98430903 98430938 1.990000e-07 67.6
4 TraesCS5A01G079100 chr5B 94.459 1859 68 19 793 2632 110420230 110418388 0.000000e+00 2830.0
5 TraesCS5A01G079100 chr5B 90.430 512 35 6 104 603 110421261 110420752 0.000000e+00 662.0
6 TraesCS5A01G079100 chr5B 95.946 74 3 0 699 772 110420292 110420219 1.510000e-23 121.0
7 TraesCS5A01G079100 chr5D 92.372 2045 64 45 608 2624 101759486 101757506 0.000000e+00 2828.0
8 TraesCS5A01G079100 chr5D 91.489 611 35 12 1 609 101760133 101759538 0.000000e+00 824.0
9 TraesCS5A01G079100 chr7A 98.698 384 5 0 2711 3094 157415805 157415422 0.000000e+00 682.0
10 TraesCS5A01G079100 chr7A 98.695 383 5 0 2712 3094 505693649 505694031 0.000000e+00 680.0
11 TraesCS5A01G079100 chr7A 97.911 383 8 0 2712 3094 505707361 505707743 0.000000e+00 664.0
12 TraesCS5A01G079100 chr7A 97.656 384 9 0 2711 3094 714754021 714753638 0.000000e+00 660.0
13 TraesCS5A01G079100 chr7A 97.396 384 10 0 2711 3094 690704922 690704539 0.000000e+00 654.0
14 TraesCS5A01G079100 chr7A 97.135 384 11 0 2711 3094 564242473 564242856 0.000000e+00 649.0
15 TraesCS5A01G079100 chr3A 97.917 384 8 0 2711 3094 743693263 743692880 0.000000e+00 665.0
16 TraesCS5A01G079100 chr4A 96.802 344 10 1 2711 3054 606409400 606409058 9.620000e-160 573.0
17 TraesCS5A01G079100 chr6A 93.750 48 2 1 2701 2747 166508927 166508974 1.540000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G079100 chr5A 98428421 98431514 3093 False 1949.733333 5714 100.000000 1 3094 3 chr5A.!!$F1 3093
1 TraesCS5A01G079100 chr5B 110418388 110421261 2873 True 1204.333333 2830 93.611667 104 2632 3 chr5B.!!$R1 2528
2 TraesCS5A01G079100 chr5D 101757506 101760133 2627 True 1826.000000 2828 91.930500 1 2624 2 chr5D.!!$R1 2623

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
657 752 0.512952 GTACGCAGTTGCAAGTCCTG 59.487 55.0 3.08 7.49 37.78 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2654 3088 0.609151 TCCCGCCGTTAAACTGATGA 59.391 50.0 0.0 0.0 0.0 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 7.340232 TGCATAAGCTAAACCAATCTTGAGAAT 59.660 33.333 0.00 0.00 42.74 2.40
53 54 7.957002 TCTTGAGAATTATAGCTCCCACTAAG 58.043 38.462 0.00 0.00 0.00 2.18
54 55 7.565398 TCTTGAGAATTATAGCTCCCACTAAGT 59.435 37.037 0.00 0.00 0.00 2.24
55 56 7.291411 TGAGAATTATAGCTCCCACTAAGTC 57.709 40.000 0.00 0.00 0.00 3.01
56 57 6.267928 TGAGAATTATAGCTCCCACTAAGTCC 59.732 42.308 0.00 0.00 0.00 3.85
239 241 4.728608 GTGAAAAATTAAGATGCTACGCCG 59.271 41.667 0.00 0.00 0.00 6.46
240 242 4.632251 TGAAAAATTAAGATGCTACGCCGA 59.368 37.500 0.00 0.00 0.00 5.54
266 268 2.264813 TCTTAGGTAATTGCACGTCGC 58.735 47.619 0.00 3.44 42.89 5.19
285 287 2.036475 CGCTGTATGATTAGCCCTGACT 59.964 50.000 0.00 0.00 36.60 3.41
289 291 4.152647 TGTATGATTAGCCCTGACTCGAT 58.847 43.478 0.00 0.00 0.00 3.59
399 404 2.235650 TGTCCCTTGCTCATTCTCTCAG 59.764 50.000 0.00 0.00 0.00 3.35
426 431 3.761897 TGTTTTCCTTGGGTATGAGGTG 58.238 45.455 0.00 0.00 34.57 4.00
482 494 8.450578 TGATTGATATCATCACCCAAGTTAAC 57.549 34.615 6.17 0.00 39.39 2.01
504 516 4.963237 GCTAGATTGCGACATAGTTCTG 57.037 45.455 0.00 0.00 0.00 3.02
509 521 5.533482 AGATTGCGACATAGTTCTGGATAC 58.467 41.667 0.00 0.00 0.00 2.24
540 552 1.150827 TTGCAGTTGCTCATCACTCG 58.849 50.000 5.62 0.00 42.66 4.18
582 594 5.263968 TCGTTGTCAATTCCTCTCTATCC 57.736 43.478 0.00 0.00 0.00 2.59
630 721 5.355596 TGAACAATTTTTCGATGCCAAGTT 58.644 33.333 0.18 0.00 0.00 2.66
635 726 5.905480 ATTTTTCGATGCCAAGTTGAAAC 57.095 34.783 3.87 0.00 30.69 2.78
637 728 4.582701 TTTCGATGCCAAGTTGAAACAT 57.417 36.364 3.87 5.12 0.00 2.71
641 736 4.083537 TCGATGCCAAGTTGAAACATGTAC 60.084 41.667 3.87 0.00 0.00 2.90
643 738 2.287308 TGCCAAGTTGAAACATGTACGC 60.287 45.455 3.87 0.00 0.00 4.42
651 746 2.356069 TGAAACATGTACGCAGTTGCAA 59.644 40.909 0.00 0.00 37.78 4.08
654 749 1.531149 ACATGTACGCAGTTGCAAGTC 59.469 47.619 3.08 0.00 37.78 3.01
657 752 0.512952 GTACGCAGTTGCAAGTCCTG 59.487 55.000 3.08 7.49 37.78 3.86
658 753 0.602638 TACGCAGTTGCAAGTCCTGG 60.603 55.000 15.11 9.07 37.78 4.45
665 760 2.028020 AGTTGCAAGTCCTGGTAGTAGC 60.028 50.000 0.00 0.00 0.00 3.58
672 778 1.065251 GTCCTGGTAGTAGCAGCGTAC 59.935 57.143 21.51 15.09 42.05 3.67
674 780 1.065701 CCTGGTAGTAGCAGCGTACAG 59.934 57.143 21.51 5.43 42.05 2.74
757 1141 2.364972 AAAGCAGCTAAACCACCAGT 57.635 45.000 0.00 0.00 0.00 4.00
760 1144 1.352352 AGCAGCTAAACCACCAGTCAT 59.648 47.619 0.00 0.00 0.00 3.06
761 1145 1.740025 GCAGCTAAACCACCAGTCATC 59.260 52.381 0.00 0.00 0.00 2.92
762 1146 2.616510 GCAGCTAAACCACCAGTCATCT 60.617 50.000 0.00 0.00 0.00 2.90
763 1147 3.265791 CAGCTAAACCACCAGTCATCTC 58.734 50.000 0.00 0.00 0.00 2.75
764 1148 3.055530 CAGCTAAACCACCAGTCATCTCT 60.056 47.826 0.00 0.00 0.00 3.10
765 1149 3.196685 AGCTAAACCACCAGTCATCTCTC 59.803 47.826 0.00 0.00 0.00 3.20
766 1150 3.196685 GCTAAACCACCAGTCATCTCTCT 59.803 47.826 0.00 0.00 0.00 3.10
767 1151 3.971245 AAACCACCAGTCATCTCTCTC 57.029 47.619 0.00 0.00 0.00 3.20
768 1152 2.917713 ACCACCAGTCATCTCTCTCT 57.082 50.000 0.00 0.00 0.00 3.10
769 1153 2.733956 ACCACCAGTCATCTCTCTCTC 58.266 52.381 0.00 0.00 0.00 3.20
770 1154 2.311542 ACCACCAGTCATCTCTCTCTCT 59.688 50.000 0.00 0.00 0.00 3.10
771 1155 2.951642 CCACCAGTCATCTCTCTCTCTC 59.048 54.545 0.00 0.00 0.00 3.20
772 1156 3.371917 CCACCAGTCATCTCTCTCTCTCT 60.372 52.174 0.00 0.00 0.00 3.10
773 1157 3.879295 CACCAGTCATCTCTCTCTCTCTC 59.121 52.174 0.00 0.00 0.00 3.20
774 1158 3.782523 ACCAGTCATCTCTCTCTCTCTCT 59.217 47.826 0.00 0.00 0.00 3.10
775 1159 4.141620 ACCAGTCATCTCTCTCTCTCTCTC 60.142 50.000 0.00 0.00 0.00 3.20
776 1160 4.102210 CCAGTCATCTCTCTCTCTCTCTCT 59.898 50.000 0.00 0.00 0.00 3.10
777 1161 5.295950 CAGTCATCTCTCTCTCTCTCTCTC 58.704 50.000 0.00 0.00 0.00 3.20
778 1162 5.070180 CAGTCATCTCTCTCTCTCTCTCTCT 59.930 48.000 0.00 0.00 0.00 3.10
779 1163 5.304101 AGTCATCTCTCTCTCTCTCTCTCTC 59.696 48.000 0.00 0.00 0.00 3.20
780 1164 5.304101 GTCATCTCTCTCTCTCTCTCTCTCT 59.696 48.000 0.00 0.00 0.00 3.10
781 1165 5.538053 TCATCTCTCTCTCTCTCTCTCTCTC 59.462 48.000 0.00 0.00 0.00 3.20
782 1166 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
783 1167 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
784 1168 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
785 1169 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
786 1170 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
787 1171 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
788 1172 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
789 1173 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
790 1174 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
791 1175 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
809 1193 4.098960 TCTCTCTCTCTCTCTCTCGTTACC 59.901 50.000 0.00 0.00 0.00 2.85
863 1254 4.212636 GCGCCTTGTACTTTTTGAAGACTA 59.787 41.667 0.00 0.00 0.00 2.59
864 1255 5.676953 CGCCTTGTACTTTTTGAAGACTAC 58.323 41.667 0.00 0.00 0.00 2.73
865 1256 5.235616 CGCCTTGTACTTTTTGAAGACTACA 59.764 40.000 0.00 0.00 0.00 2.74
1642 2054 2.438614 AGCAGCAGCAGCAGATGG 60.439 61.111 12.92 0.00 45.49 3.51
1643 2055 4.194720 GCAGCAGCAGCAGATGGC 62.195 66.667 4.63 0.00 45.49 4.40
2321 2737 4.890581 TGTCATTGATCATGCCAATCATCA 59.109 37.500 0.00 0.36 33.36 3.07
2374 2791 8.807667 AATCATGACAAGTTCAACAAGAAATC 57.192 30.769 0.00 0.00 37.92 2.17
2392 2814 1.298602 TCATTTGATCGTGGGCATCG 58.701 50.000 0.00 0.00 0.00 3.84
2437 2859 0.875908 CATACGATGTGACCAGGCGG 60.876 60.000 0.00 0.00 38.77 6.13
2457 2879 3.002656 CGGCATGGTAAGCTATCAAACAG 59.997 47.826 0.00 0.00 0.00 3.16
2460 2882 5.125417 GGCATGGTAAGCTATCAAACAGAAA 59.875 40.000 0.00 0.00 0.00 2.52
2484 2917 8.891671 AAAAGTAGTGCAACAAATGATTTCAT 57.108 26.923 0.00 0.00 41.43 2.57
2486 2919 6.392354 AGTAGTGCAACAAATGATTTCATGG 58.608 36.000 0.00 0.00 41.43 3.66
2487 2920 5.217978 AGTGCAACAAATGATTTCATGGT 57.782 34.783 0.00 0.00 41.43 3.55
2489 2922 6.757237 AGTGCAACAAATGATTTCATGGTAA 58.243 32.000 0.00 0.00 41.43 2.85
2491 2924 5.638657 TGCAACAAATGATTTCATGGTAAGC 59.361 36.000 0.00 5.36 36.56 3.09
2492 2925 5.870978 GCAACAAATGATTTCATGGTAAGCT 59.129 36.000 0.00 0.00 36.56 3.74
2493 2926 7.035004 GCAACAAATGATTTCATGGTAAGCTA 58.965 34.615 0.00 0.00 36.56 3.32
2495 2928 9.241317 CAACAAATGATTTCATGGTAAGCTATC 57.759 33.333 0.00 0.00 36.56 2.08
2497 2930 8.970020 ACAAATGATTTCATGGTAAGCTATCAA 58.030 29.630 0.00 0.00 36.56 2.57
2498 2931 9.806203 CAAATGATTTCATGGTAAGCTATCAAA 57.194 29.630 0.00 0.00 36.56 2.69
2499 2932 9.807649 AAATGATTTCATGGTAAGCTATCAAAC 57.192 29.630 0.00 0.00 36.56 2.93
2501 2934 7.988737 TGATTTCATGGTAAGCTATCAAACAG 58.011 34.615 0.00 0.00 0.00 3.16
2502 2935 7.828717 TGATTTCATGGTAAGCTATCAAACAGA 59.171 33.333 0.00 0.00 0.00 3.41
2503 2936 7.994425 TTTCATGGTAAGCTATCAAACAGAA 57.006 32.000 0.00 0.00 0.00 3.02
2504 2937 7.994425 TTCATGGTAAGCTATCAAACAGAAA 57.006 32.000 0.00 0.00 0.00 2.52
2505 2938 7.994425 TCATGGTAAGCTATCAAACAGAAAA 57.006 32.000 0.00 0.00 0.00 2.29
2506 2939 8.402798 TCATGGTAAGCTATCAAACAGAAAAA 57.597 30.769 0.00 0.00 0.00 1.94
2507 2940 8.514594 TCATGGTAAGCTATCAAACAGAAAAAG 58.485 33.333 0.00 0.00 0.00 2.27
2508 2941 7.817418 TGGTAAGCTATCAAACAGAAAAAGT 57.183 32.000 0.00 0.00 0.00 2.66
2509 2942 8.911918 TGGTAAGCTATCAAACAGAAAAAGTA 57.088 30.769 0.00 0.00 0.00 2.24
2510 2943 8.999431 TGGTAAGCTATCAAACAGAAAAAGTAG 58.001 33.333 0.00 0.00 0.00 2.57
2515 2948 7.013274 AGCTATCAAACAGAAAAAGTAGTGCAA 59.987 33.333 0.00 0.00 0.00 4.08
2552 2986 6.551227 GCTAAGAGAAATTTGGAACCCCATAT 59.449 38.462 0.00 0.00 43.12 1.78
2577 3011 3.313249 TGGCATCAGCATTCAATCTTACG 59.687 43.478 0.00 0.00 44.61 3.18
2594 3028 9.250986 CAATCTTACGTTTTTCTCAAGAATACG 57.749 33.333 18.46 18.46 42.66 3.06
2632 3066 4.521146 AGAAAGGCCACTAACATGATCTG 58.479 43.478 5.01 0.00 0.00 2.90
2633 3067 2.338577 AGGCCACTAACATGATCTGC 57.661 50.000 5.01 0.00 0.00 4.26
2634 3068 0.940126 GGCCACTAACATGATCTGCG 59.060 55.000 0.00 0.00 0.00 5.18
2635 3069 0.940126 GCCACTAACATGATCTGCGG 59.060 55.000 0.00 0.00 0.00 5.69
2636 3070 1.743772 GCCACTAACATGATCTGCGGT 60.744 52.381 0.00 0.00 0.00 5.68
2637 3071 2.205074 CCACTAACATGATCTGCGGTC 58.795 52.381 0.00 0.00 0.00 4.79
2638 3072 2.418609 CCACTAACATGATCTGCGGTCA 60.419 50.000 0.00 0.00 0.00 4.02
2639 3073 2.604914 CACTAACATGATCTGCGGTCAC 59.395 50.000 0.00 0.00 0.00 3.67
2640 3074 2.233676 ACTAACATGATCTGCGGTCACA 59.766 45.455 0.00 0.00 0.00 3.58
2641 3075 2.183478 AACATGATCTGCGGTCACAA 57.817 45.000 0.00 0.00 0.00 3.33
2642 3076 1.442769 ACATGATCTGCGGTCACAAC 58.557 50.000 0.00 0.00 0.00 3.32
2643 3077 0.729116 CATGATCTGCGGTCACAACC 59.271 55.000 0.00 0.00 42.66 3.77
2644 3078 0.615331 ATGATCTGCGGTCACAACCT 59.385 50.000 0.00 0.00 44.04 3.50
2645 3079 0.396435 TGATCTGCGGTCACAACCTT 59.604 50.000 0.00 0.00 44.04 3.50
2646 3080 0.798776 GATCTGCGGTCACAACCTTG 59.201 55.000 0.00 0.00 44.04 3.61
2647 3081 0.606401 ATCTGCGGTCACAACCTTGG 60.606 55.000 0.00 0.00 44.04 3.61
2648 3082 2.904866 TGCGGTCACAACCTTGGC 60.905 61.111 0.00 0.00 44.04 4.52
2649 3083 2.594592 GCGGTCACAACCTTGGCT 60.595 61.111 0.00 0.00 44.04 4.75
2650 3084 1.302192 GCGGTCACAACCTTGGCTA 60.302 57.895 0.00 0.00 44.04 3.93
2651 3085 0.676782 GCGGTCACAACCTTGGCTAT 60.677 55.000 0.00 0.00 44.04 2.97
2652 3086 1.369625 CGGTCACAACCTTGGCTATC 58.630 55.000 0.00 0.00 44.04 2.08
2653 3087 1.751437 GGTCACAACCTTGGCTATCC 58.249 55.000 0.00 0.00 42.80 2.59
2654 3088 1.282157 GGTCACAACCTTGGCTATCCT 59.718 52.381 0.00 0.00 42.80 3.24
2655 3089 2.633488 GTCACAACCTTGGCTATCCTC 58.367 52.381 0.00 0.00 0.00 3.71
2656 3090 2.027192 GTCACAACCTTGGCTATCCTCA 60.027 50.000 0.00 0.00 0.00 3.86
2657 3091 2.846206 TCACAACCTTGGCTATCCTCAT 59.154 45.455 0.00 0.00 0.00 2.90
2658 3092 3.118261 TCACAACCTTGGCTATCCTCATC 60.118 47.826 0.00 0.00 0.00 2.92
2659 3093 2.846206 ACAACCTTGGCTATCCTCATCA 59.154 45.455 0.00 0.00 0.00 3.07
2660 3094 3.118112 ACAACCTTGGCTATCCTCATCAG 60.118 47.826 0.00 0.00 0.00 2.90
2661 3095 2.769209 ACCTTGGCTATCCTCATCAGT 58.231 47.619 0.00 0.00 0.00 3.41
2662 3096 3.118531 ACCTTGGCTATCCTCATCAGTT 58.881 45.455 0.00 0.00 0.00 3.16
2663 3097 3.525199 ACCTTGGCTATCCTCATCAGTTT 59.475 43.478 0.00 0.00 0.00 2.66
2664 3098 4.721776 ACCTTGGCTATCCTCATCAGTTTA 59.278 41.667 0.00 0.00 0.00 2.01
2665 3099 5.191722 ACCTTGGCTATCCTCATCAGTTTAA 59.808 40.000 0.00 0.00 0.00 1.52
2666 3100 5.529060 CCTTGGCTATCCTCATCAGTTTAAC 59.471 44.000 0.00 0.00 0.00 2.01
2667 3101 4.693283 TGGCTATCCTCATCAGTTTAACG 58.307 43.478 0.00 0.00 0.00 3.18
2668 3102 4.058817 GGCTATCCTCATCAGTTTAACGG 58.941 47.826 0.00 0.00 0.00 4.44
2669 3103 3.495001 GCTATCCTCATCAGTTTAACGGC 59.505 47.826 0.00 0.00 0.00 5.68
2670 3104 2.004583 TCCTCATCAGTTTAACGGCG 57.995 50.000 4.80 4.80 0.00 6.46
2671 3105 1.006832 CCTCATCAGTTTAACGGCGG 58.993 55.000 13.24 0.00 0.00 6.13
2672 3106 1.006832 CTCATCAGTTTAACGGCGGG 58.993 55.000 13.24 0.00 0.00 6.13
2673 3107 0.609151 TCATCAGTTTAACGGCGGGA 59.391 50.000 13.24 0.00 0.00 5.14
2674 3108 1.002201 TCATCAGTTTAACGGCGGGAA 59.998 47.619 13.24 0.94 0.00 3.97
2675 3109 1.807742 CATCAGTTTAACGGCGGGAAA 59.192 47.619 13.24 8.18 0.00 3.13
2676 3110 1.964552 TCAGTTTAACGGCGGGAAAA 58.035 45.000 13.24 5.63 0.00 2.29
2677 3111 2.506444 TCAGTTTAACGGCGGGAAAAT 58.494 42.857 13.24 7.40 0.00 1.82
2678 3112 2.226912 TCAGTTTAACGGCGGGAAAATG 59.773 45.455 21.99 21.99 31.29 2.32
2679 3113 2.226912 CAGTTTAACGGCGGGAAAATGA 59.773 45.455 22.96 0.00 31.58 2.57
2680 3114 3.086282 AGTTTAACGGCGGGAAAATGAT 58.914 40.909 13.24 0.00 0.00 2.45
2681 3115 3.508402 AGTTTAACGGCGGGAAAATGATT 59.492 39.130 13.24 0.00 0.00 2.57
2682 3116 3.768468 TTAACGGCGGGAAAATGATTC 57.232 42.857 13.24 0.00 0.00 2.52
2683 3117 1.540267 AACGGCGGGAAAATGATTCA 58.460 45.000 13.24 0.00 0.00 2.57
2684 3118 1.540267 ACGGCGGGAAAATGATTCAA 58.460 45.000 13.24 0.00 0.00 2.69
2685 3119 1.472480 ACGGCGGGAAAATGATTCAAG 59.528 47.619 13.24 0.00 0.00 3.02
2686 3120 1.798813 CGGCGGGAAAATGATTCAAGC 60.799 52.381 0.00 0.00 0.00 4.01
2687 3121 1.471501 GGCGGGAAAATGATTCAAGCC 60.472 52.381 9.31 9.31 36.14 4.35
2688 3122 1.478105 GCGGGAAAATGATTCAAGCCT 59.522 47.619 0.00 0.00 0.00 4.58
2689 3123 2.480244 GCGGGAAAATGATTCAAGCCTC 60.480 50.000 0.00 0.00 0.00 4.70
2690 3124 3.019564 CGGGAAAATGATTCAAGCCTCT 58.980 45.455 0.00 0.00 0.00 3.69
2691 3125 3.445096 CGGGAAAATGATTCAAGCCTCTT 59.555 43.478 0.00 0.00 0.00 2.85
2692 3126 4.439289 CGGGAAAATGATTCAAGCCTCTTC 60.439 45.833 0.00 0.00 0.00 2.87
2693 3127 4.708909 GGGAAAATGATTCAAGCCTCTTCT 59.291 41.667 0.00 0.00 0.00 2.85
2694 3128 5.163571 GGGAAAATGATTCAAGCCTCTTCTC 60.164 44.000 0.00 0.00 0.00 2.87
2695 3129 5.651576 GGAAAATGATTCAAGCCTCTTCTCT 59.348 40.000 0.00 0.00 0.00 3.10
2696 3130 6.152492 GGAAAATGATTCAAGCCTCTTCTCTT 59.848 38.462 0.00 0.00 0.00 2.85
2697 3131 6.512342 AAATGATTCAAGCCTCTTCTCTTG 57.488 37.500 0.00 0.00 40.62 3.02
2698 3132 4.630644 TGATTCAAGCCTCTTCTCTTGT 57.369 40.909 0.00 0.00 40.27 3.16
2699 3133 4.978099 TGATTCAAGCCTCTTCTCTTGTT 58.022 39.130 0.00 0.00 40.27 2.83
2700 3134 5.380043 TGATTCAAGCCTCTTCTCTTGTTT 58.620 37.500 0.00 0.00 40.27 2.83
2701 3135 5.829924 TGATTCAAGCCTCTTCTCTTGTTTT 59.170 36.000 0.00 0.00 40.27 2.43
2702 3136 6.998074 TGATTCAAGCCTCTTCTCTTGTTTTA 59.002 34.615 0.00 0.00 40.27 1.52
2703 3137 6.619801 TTCAAGCCTCTTCTCTTGTTTTAC 57.380 37.500 0.00 0.00 40.27 2.01
2704 3138 5.930135 TCAAGCCTCTTCTCTTGTTTTACT 58.070 37.500 0.00 0.00 40.27 2.24
2705 3139 5.760253 TCAAGCCTCTTCTCTTGTTTTACTG 59.240 40.000 0.00 0.00 40.27 2.74
2706 3140 4.646572 AGCCTCTTCTCTTGTTTTACTGG 58.353 43.478 0.00 0.00 0.00 4.00
2707 3141 4.103311 AGCCTCTTCTCTTGTTTTACTGGT 59.897 41.667 0.00 0.00 0.00 4.00
2708 3142 4.452795 GCCTCTTCTCTTGTTTTACTGGTC 59.547 45.833 0.00 0.00 0.00 4.02
2709 3143 4.998033 CCTCTTCTCTTGTTTTACTGGTCC 59.002 45.833 0.00 0.00 0.00 4.46
2710 3144 4.969484 TCTTCTCTTGTTTTACTGGTCCC 58.031 43.478 0.00 0.00 0.00 4.46
2711 3145 4.410883 TCTTCTCTTGTTTTACTGGTCCCA 59.589 41.667 0.00 0.00 0.00 4.37
2730 3164 3.878667 GGCCGGCCCTAGCATCTT 61.879 66.667 36.64 0.00 42.56 2.40
2731 3165 2.516888 GGCCGGCCCTAGCATCTTA 61.517 63.158 36.64 0.00 42.56 2.10
2732 3166 1.004440 GCCGGCCCTAGCATCTTAG 60.004 63.158 18.11 0.00 42.56 2.18
2733 3167 1.472662 GCCGGCCCTAGCATCTTAGA 61.473 60.000 18.11 0.00 42.56 2.10
2734 3168 0.605589 CCGGCCCTAGCATCTTAGAG 59.394 60.000 0.00 0.00 42.56 2.43
2735 3169 0.605589 CGGCCCTAGCATCTTAGAGG 59.394 60.000 0.00 0.00 42.56 3.69
2736 3170 0.323302 GGCCCTAGCATCTTAGAGGC 59.677 60.000 11.17 11.17 42.56 4.70
2737 3171 0.323302 GCCCTAGCATCTTAGAGGCC 59.677 60.000 15.48 0.00 40.43 5.19
2738 3172 0.980423 CCCTAGCATCTTAGAGGCCC 59.020 60.000 15.48 0.00 40.43 5.80
2739 3173 1.484065 CCCTAGCATCTTAGAGGCCCT 60.484 57.143 15.48 0.37 40.43 5.19
2740 3174 2.334023 CCTAGCATCTTAGAGGCCCTT 58.666 52.381 15.48 0.00 40.43 3.95
2741 3175 2.038295 CCTAGCATCTTAGAGGCCCTTG 59.962 54.545 15.48 3.52 40.43 3.61
2742 3176 1.589414 AGCATCTTAGAGGCCCTTGT 58.411 50.000 15.48 0.00 40.43 3.16
2743 3177 1.211457 AGCATCTTAGAGGCCCTTGTG 59.789 52.381 15.48 0.00 40.43 3.33
2744 3178 1.673168 CATCTTAGAGGCCCTTGTGC 58.327 55.000 0.00 0.00 0.00 4.57
2745 3179 0.179000 ATCTTAGAGGCCCTTGTGCG 59.821 55.000 0.00 0.00 0.00 5.34
2746 3180 0.902984 TCTTAGAGGCCCTTGTGCGA 60.903 55.000 0.00 0.00 0.00 5.10
2747 3181 0.036388 CTTAGAGGCCCTTGTGCGAA 60.036 55.000 0.00 0.00 0.00 4.70
2748 3182 0.321298 TTAGAGGCCCTTGTGCGAAC 60.321 55.000 0.00 0.00 0.00 3.95
2749 3183 1.192146 TAGAGGCCCTTGTGCGAACT 61.192 55.000 0.00 0.00 0.00 3.01
2750 3184 1.600916 GAGGCCCTTGTGCGAACTT 60.601 57.895 0.00 0.00 0.00 2.66
2751 3185 1.578206 GAGGCCCTTGTGCGAACTTC 61.578 60.000 0.00 0.00 0.00 3.01
2752 3186 1.600916 GGCCCTTGTGCGAACTTCT 60.601 57.895 0.00 0.00 0.00 2.85
2753 3187 1.576421 GCCCTTGTGCGAACTTCTG 59.424 57.895 0.00 0.00 0.00 3.02
2754 3188 0.884704 GCCCTTGTGCGAACTTCTGA 60.885 55.000 0.00 0.00 0.00 3.27
2755 3189 1.593196 CCCTTGTGCGAACTTCTGAA 58.407 50.000 0.00 0.00 0.00 3.02
2756 3190 1.264288 CCCTTGTGCGAACTTCTGAAC 59.736 52.381 0.00 0.00 0.00 3.18
2757 3191 2.213499 CCTTGTGCGAACTTCTGAACT 58.787 47.619 0.00 0.00 0.00 3.01
2758 3192 2.221981 CCTTGTGCGAACTTCTGAACTC 59.778 50.000 0.00 0.00 0.00 3.01
2759 3193 1.865865 TGTGCGAACTTCTGAACTCC 58.134 50.000 0.00 0.00 0.00 3.85
2760 3194 1.138069 TGTGCGAACTTCTGAACTCCA 59.862 47.619 0.00 0.00 0.00 3.86
2761 3195 1.527311 GTGCGAACTTCTGAACTCCAC 59.473 52.381 0.00 0.00 0.00 4.02
2762 3196 1.149148 GCGAACTTCTGAACTCCACC 58.851 55.000 0.00 0.00 0.00 4.61
2763 3197 1.419374 CGAACTTCTGAACTCCACCG 58.581 55.000 0.00 0.00 0.00 4.94
2764 3198 1.797025 GAACTTCTGAACTCCACCGG 58.203 55.000 0.00 0.00 0.00 5.28
2765 3199 0.250338 AACTTCTGAACTCCACCGGC 60.250 55.000 0.00 0.00 0.00 6.13
2766 3200 1.376037 CTTCTGAACTCCACCGGCC 60.376 63.158 0.00 0.00 0.00 6.13
2767 3201 2.111999 CTTCTGAACTCCACCGGCCA 62.112 60.000 0.00 0.00 0.00 5.36
2768 3202 1.488705 TTCTGAACTCCACCGGCCAT 61.489 55.000 0.00 0.00 0.00 4.40
2769 3203 1.746615 CTGAACTCCACCGGCCATG 60.747 63.158 0.00 0.00 0.00 3.66
2770 3204 2.438434 GAACTCCACCGGCCATGG 60.438 66.667 15.73 15.73 38.71 3.66
2771 3205 3.995506 GAACTCCACCGGCCATGGG 62.996 68.421 20.42 14.16 37.85 4.00
2794 3228 4.704833 GCCTTGGCACGGCTCTGA 62.705 66.667 26.16 0.00 44.17 3.27
2795 3229 2.743928 CCTTGGCACGGCTCTGAC 60.744 66.667 0.00 0.00 0.00 3.51
2796 3230 2.345244 CTTGGCACGGCTCTGACT 59.655 61.111 0.00 0.00 0.00 3.41
2797 3231 2.031012 TTGGCACGGCTCTGACTG 59.969 61.111 0.00 0.00 0.00 3.51
2798 3232 4.687215 TGGCACGGCTCTGACTGC 62.687 66.667 0.00 0.00 0.00 4.40
2805 3239 2.653702 GCTCTGACTGCCACGACT 59.346 61.111 0.00 0.00 0.00 4.18
2806 3240 1.883732 GCTCTGACTGCCACGACTA 59.116 57.895 0.00 0.00 0.00 2.59
2807 3241 0.457851 GCTCTGACTGCCACGACTAT 59.542 55.000 0.00 0.00 0.00 2.12
2808 3242 1.535015 GCTCTGACTGCCACGACTATC 60.535 57.143 0.00 0.00 0.00 2.08
2809 3243 1.745653 CTCTGACTGCCACGACTATCA 59.254 52.381 0.00 0.00 0.00 2.15
2810 3244 1.472878 TCTGACTGCCACGACTATCAC 59.527 52.381 0.00 0.00 0.00 3.06
2811 3245 0.530744 TGACTGCCACGACTATCACC 59.469 55.000 0.00 0.00 0.00 4.02
2812 3246 0.530744 GACTGCCACGACTATCACCA 59.469 55.000 0.00 0.00 0.00 4.17
2813 3247 0.973632 ACTGCCACGACTATCACCAA 59.026 50.000 0.00 0.00 0.00 3.67
2814 3248 1.555075 ACTGCCACGACTATCACCAAT 59.445 47.619 0.00 0.00 0.00 3.16
2815 3249 2.764010 ACTGCCACGACTATCACCAATA 59.236 45.455 0.00 0.00 0.00 1.90
2816 3250 3.196901 ACTGCCACGACTATCACCAATAA 59.803 43.478 0.00 0.00 0.00 1.40
2817 3251 4.141711 ACTGCCACGACTATCACCAATAAT 60.142 41.667 0.00 0.00 0.00 1.28
2818 3252 4.126437 TGCCACGACTATCACCAATAATG 58.874 43.478 0.00 0.00 0.00 1.90
2819 3253 4.127171 GCCACGACTATCACCAATAATGT 58.873 43.478 0.00 0.00 0.00 2.71
2820 3254 4.574828 GCCACGACTATCACCAATAATGTT 59.425 41.667 0.00 0.00 0.00 2.71
2821 3255 5.504010 GCCACGACTATCACCAATAATGTTG 60.504 44.000 0.00 0.00 0.00 3.33
2822 3256 5.584649 CCACGACTATCACCAATAATGTTGT 59.415 40.000 0.00 0.00 0.00 3.32
2823 3257 6.456853 CCACGACTATCACCAATAATGTTGTG 60.457 42.308 0.00 0.00 37.80 3.33
2824 3258 5.584649 ACGACTATCACCAATAATGTTGTGG 59.415 40.000 0.00 0.00 38.46 4.17
2825 3259 5.504010 CGACTATCACCAATAATGTTGTGGC 60.504 44.000 0.00 0.00 35.72 5.01
2826 3260 5.260424 ACTATCACCAATAATGTTGTGGCA 58.740 37.500 0.00 0.00 35.72 4.92
2827 3261 4.724074 ATCACCAATAATGTTGTGGCAG 57.276 40.909 0.00 0.00 35.72 4.85
2828 3262 2.824936 TCACCAATAATGTTGTGGCAGG 59.175 45.455 0.00 0.00 35.72 4.85
2829 3263 2.562298 CACCAATAATGTTGTGGCAGGT 59.438 45.455 0.00 0.00 35.72 4.00
2830 3264 2.562298 ACCAATAATGTTGTGGCAGGTG 59.438 45.455 0.00 0.00 35.72 4.00
2831 3265 2.562298 CCAATAATGTTGTGGCAGGTGT 59.438 45.455 0.00 0.00 0.00 4.16
2832 3266 3.577667 CAATAATGTTGTGGCAGGTGTG 58.422 45.455 0.00 0.00 0.00 3.82
2833 3267 2.356665 TAATGTTGTGGCAGGTGTGT 57.643 45.000 0.00 0.00 0.00 3.72
2834 3268 2.356665 AATGTTGTGGCAGGTGTGTA 57.643 45.000 0.00 0.00 0.00 2.90
2835 3269 1.896220 ATGTTGTGGCAGGTGTGTAG 58.104 50.000 0.00 0.00 0.00 2.74
2836 3270 0.544223 TGTTGTGGCAGGTGTGTAGT 59.456 50.000 0.00 0.00 0.00 2.73
2837 3271 0.944386 GTTGTGGCAGGTGTGTAGTG 59.056 55.000 0.00 0.00 0.00 2.74
2838 3272 0.179032 TTGTGGCAGGTGTGTAGTGG 60.179 55.000 0.00 0.00 0.00 4.00
2839 3273 1.966451 GTGGCAGGTGTGTAGTGGC 60.966 63.158 0.00 0.00 37.28 5.01
2840 3274 2.146724 TGGCAGGTGTGTAGTGGCT 61.147 57.895 0.00 0.00 37.63 4.75
2841 3275 1.672356 GGCAGGTGTGTAGTGGCTG 60.672 63.158 0.00 0.00 34.08 4.85
2842 3276 2.328099 GCAGGTGTGTAGTGGCTGC 61.328 63.158 0.00 0.00 0.00 5.25
2843 3277 2.029288 CAGGTGTGTAGTGGCTGCG 61.029 63.158 0.00 0.00 0.00 5.18
2844 3278 2.207229 AGGTGTGTAGTGGCTGCGA 61.207 57.895 0.00 0.00 0.00 5.10
2845 3279 2.027625 GGTGTGTAGTGGCTGCGAC 61.028 63.158 6.69 6.69 0.00 5.19
2846 3280 2.027625 GTGTGTAGTGGCTGCGACC 61.028 63.158 11.29 0.00 0.00 4.79
2847 3281 2.434359 GTGTAGTGGCTGCGACCC 60.434 66.667 11.29 3.37 0.00 4.46
2848 3282 4.063967 TGTAGTGGCTGCGACCCG 62.064 66.667 11.29 0.00 0.00 5.28
2849 3283 4.065281 GTAGTGGCTGCGACCCGT 62.065 66.667 11.29 0.00 0.00 5.28
2850 3284 3.755628 TAGTGGCTGCGACCCGTC 61.756 66.667 11.29 0.00 0.00 4.79
2869 3303 3.879912 GGAAGAACCGACAACGAGA 57.120 52.632 0.00 0.00 42.66 4.04
2870 3304 2.365408 GGAAGAACCGACAACGAGAT 57.635 50.000 0.00 0.00 42.66 2.75
2871 3305 2.685100 GGAAGAACCGACAACGAGATT 58.315 47.619 0.00 0.00 42.66 2.40
2872 3306 2.666994 GGAAGAACCGACAACGAGATTC 59.333 50.000 0.00 0.00 42.66 2.52
2873 3307 3.314553 GAAGAACCGACAACGAGATTCA 58.685 45.455 0.00 0.00 42.66 2.57
2874 3308 3.594603 AGAACCGACAACGAGATTCAT 57.405 42.857 0.00 0.00 42.66 2.57
2875 3309 3.512680 AGAACCGACAACGAGATTCATC 58.487 45.455 0.00 0.00 42.66 2.92
2876 3310 2.295253 ACCGACAACGAGATTCATCC 57.705 50.000 0.00 0.00 42.66 3.51
2877 3311 1.548719 ACCGACAACGAGATTCATCCA 59.451 47.619 0.00 0.00 42.66 3.41
2878 3312 2.028476 ACCGACAACGAGATTCATCCAA 60.028 45.455 0.00 0.00 42.66 3.53
2879 3313 2.348666 CCGACAACGAGATTCATCCAAC 59.651 50.000 0.00 0.00 42.66 3.77
2880 3314 2.028045 CGACAACGAGATTCATCCAACG 59.972 50.000 0.00 0.00 42.66 4.10
2881 3315 3.250744 GACAACGAGATTCATCCAACGA 58.749 45.455 0.00 0.00 0.00 3.85
2882 3316 3.254060 ACAACGAGATTCATCCAACGAG 58.746 45.455 0.00 0.00 0.00 4.18
2883 3317 3.056821 ACAACGAGATTCATCCAACGAGA 60.057 43.478 0.00 0.00 0.00 4.04
2884 3318 3.868757 ACGAGATTCATCCAACGAGAA 57.131 42.857 0.00 0.00 0.00 2.87
2885 3319 4.188247 ACGAGATTCATCCAACGAGAAA 57.812 40.909 0.00 0.00 0.00 2.52
2886 3320 4.566004 ACGAGATTCATCCAACGAGAAAA 58.434 39.130 0.00 0.00 0.00 2.29
2887 3321 4.994852 ACGAGATTCATCCAACGAGAAAAA 59.005 37.500 0.00 0.00 0.00 1.94
2888 3322 5.643777 ACGAGATTCATCCAACGAGAAAAAT 59.356 36.000 0.00 0.00 0.00 1.82
2889 3323 6.183360 ACGAGATTCATCCAACGAGAAAAATC 60.183 38.462 0.00 0.00 0.00 2.17
2890 3324 6.183360 CGAGATTCATCCAACGAGAAAAATCA 60.183 38.462 0.00 0.00 0.00 2.57
2891 3325 7.466455 CGAGATTCATCCAACGAGAAAAATCAT 60.466 37.037 0.00 0.00 0.00 2.45
2892 3326 8.059798 AGATTCATCCAACGAGAAAAATCATT 57.940 30.769 0.00 0.00 0.00 2.57
2893 3327 7.972277 AGATTCATCCAACGAGAAAAATCATTG 59.028 33.333 0.00 0.00 0.00 2.82
2894 3328 5.953183 TCATCCAACGAGAAAAATCATTGG 58.047 37.500 0.00 0.00 38.35 3.16
2895 3329 5.476599 TCATCCAACGAGAAAAATCATTGGT 59.523 36.000 1.98 0.00 38.20 3.67
2896 3330 5.782893 TCCAACGAGAAAAATCATTGGTT 57.217 34.783 1.98 0.00 38.20 3.67
2897 3331 5.527951 TCCAACGAGAAAAATCATTGGTTG 58.472 37.500 1.98 0.00 38.20 3.77
2898 3332 4.150451 CCAACGAGAAAAATCATTGGTTGC 59.850 41.667 0.00 0.00 33.93 4.17
2899 3333 4.582701 ACGAGAAAAATCATTGGTTGCA 57.417 36.364 0.00 0.00 0.00 4.08
2900 3334 5.138125 ACGAGAAAAATCATTGGTTGCAT 57.862 34.783 0.00 0.00 0.00 3.96
2901 3335 4.925054 ACGAGAAAAATCATTGGTTGCATG 59.075 37.500 0.00 0.00 0.00 4.06
2902 3336 4.327898 CGAGAAAAATCATTGGTTGCATGG 59.672 41.667 0.00 0.00 0.00 3.66
2903 3337 5.231702 AGAAAAATCATTGGTTGCATGGT 57.768 34.783 0.00 0.00 0.00 3.55
2904 3338 4.998672 AGAAAAATCATTGGTTGCATGGTG 59.001 37.500 0.00 0.00 0.00 4.17
2905 3339 2.389962 AATCATTGGTTGCATGGTGC 57.610 45.000 0.00 0.00 45.29 5.01
2906 3340 0.538118 ATCATTGGTTGCATGGTGCC 59.462 50.000 0.00 0.00 44.23 5.01
2907 3341 0.542467 TCATTGGTTGCATGGTGCCT 60.542 50.000 0.00 0.00 44.23 4.75
2908 3342 1.184431 CATTGGTTGCATGGTGCCTA 58.816 50.000 0.00 0.00 44.23 3.93
2909 3343 1.549620 CATTGGTTGCATGGTGCCTAA 59.450 47.619 0.00 0.00 44.23 2.69
2910 3344 1.935799 TTGGTTGCATGGTGCCTAAT 58.064 45.000 0.00 0.00 44.23 1.73
2911 3345 1.935799 TGGTTGCATGGTGCCTAATT 58.064 45.000 0.00 0.00 44.23 1.40
2912 3346 3.093057 TGGTTGCATGGTGCCTAATTA 57.907 42.857 0.00 0.00 44.23 1.40
2913 3347 3.023119 TGGTTGCATGGTGCCTAATTAG 58.977 45.455 5.43 5.43 44.23 1.73
2914 3348 3.023832 GGTTGCATGGTGCCTAATTAGT 58.976 45.455 11.50 0.00 44.23 2.24
2915 3349 3.181487 GGTTGCATGGTGCCTAATTAGTG 60.181 47.826 11.50 3.33 44.23 2.74
2916 3350 2.653726 TGCATGGTGCCTAATTAGTGG 58.346 47.619 11.50 0.00 44.23 4.00
2917 3351 2.240921 TGCATGGTGCCTAATTAGTGGA 59.759 45.455 11.50 0.68 44.23 4.02
2918 3352 2.880890 GCATGGTGCCTAATTAGTGGAG 59.119 50.000 11.50 0.00 37.42 3.86
2919 3353 3.685550 GCATGGTGCCTAATTAGTGGAGT 60.686 47.826 11.50 0.00 37.42 3.85
2920 3354 4.444306 GCATGGTGCCTAATTAGTGGAGTA 60.444 45.833 11.50 0.00 37.42 2.59
2921 3355 5.746065 GCATGGTGCCTAATTAGTGGAGTAT 60.746 44.000 11.50 0.49 37.42 2.12
2922 3356 5.968676 TGGTGCCTAATTAGTGGAGTATT 57.031 39.130 11.50 0.00 0.00 1.89
2923 3357 5.680619 TGGTGCCTAATTAGTGGAGTATTG 58.319 41.667 11.50 0.00 0.00 1.90
2924 3358 4.515567 GGTGCCTAATTAGTGGAGTATTGC 59.484 45.833 11.50 4.95 0.00 3.56
2925 3359 5.123227 GTGCCTAATTAGTGGAGTATTGCA 58.877 41.667 11.50 7.33 0.00 4.08
2926 3360 5.765182 GTGCCTAATTAGTGGAGTATTGCAT 59.235 40.000 11.50 0.00 0.00 3.96
2927 3361 5.764686 TGCCTAATTAGTGGAGTATTGCATG 59.235 40.000 11.50 0.00 0.00 4.06
2928 3362 5.335191 GCCTAATTAGTGGAGTATTGCATGC 60.335 44.000 11.82 11.82 0.00 4.06
2929 3363 6.000219 CCTAATTAGTGGAGTATTGCATGCT 59.000 40.000 20.33 1.26 0.00 3.79
2930 3364 6.488006 CCTAATTAGTGGAGTATTGCATGCTT 59.512 38.462 20.33 9.09 0.00 3.91
2931 3365 6.780457 AATTAGTGGAGTATTGCATGCTTT 57.220 33.333 20.33 8.70 0.00 3.51
2932 3366 6.780457 ATTAGTGGAGTATTGCATGCTTTT 57.220 33.333 20.33 6.05 0.00 2.27
2933 3367 6.588719 TTAGTGGAGTATTGCATGCTTTTT 57.411 33.333 20.33 3.44 0.00 1.94
2955 3389 5.734855 TTTAGCTTGAATCGGAGTATTGC 57.265 39.130 0.00 0.00 0.00 3.56
2956 3390 3.266510 AGCTTGAATCGGAGTATTGCA 57.733 42.857 0.00 0.00 0.00 4.08
2957 3391 3.813443 AGCTTGAATCGGAGTATTGCAT 58.187 40.909 0.00 0.00 0.00 3.96
2958 3392 3.562973 AGCTTGAATCGGAGTATTGCATG 59.437 43.478 0.00 0.00 0.00 4.06
2959 3393 3.561310 GCTTGAATCGGAGTATTGCATGA 59.439 43.478 0.00 0.00 0.00 3.07
2960 3394 4.214971 GCTTGAATCGGAGTATTGCATGAT 59.785 41.667 0.00 0.00 0.00 2.45
2961 3395 5.678132 TTGAATCGGAGTATTGCATGATG 57.322 39.130 0.00 0.00 0.00 3.07
2962 3396 3.499537 TGAATCGGAGTATTGCATGATGC 59.500 43.478 11.12 11.12 45.29 3.91
2971 3405 2.523412 GCATGATGCATGGGGCCT 60.523 61.111 13.36 0.00 44.26 5.19
2972 3406 1.228644 GCATGATGCATGGGGCCTA 60.229 57.895 13.36 0.00 44.26 3.93
2973 3407 0.828762 GCATGATGCATGGGGCCTAA 60.829 55.000 13.36 0.00 44.26 2.69
2974 3408 1.933021 CATGATGCATGGGGCCTAAT 58.067 50.000 2.46 0.00 43.89 1.73
2975 3409 2.253610 CATGATGCATGGGGCCTAATT 58.746 47.619 2.46 0.00 43.89 1.40
2976 3410 3.433343 CATGATGCATGGGGCCTAATTA 58.567 45.455 2.46 0.00 43.89 1.40
2977 3411 3.609256 TGATGCATGGGGCCTAATTAA 57.391 42.857 2.46 0.00 43.89 1.40
2978 3412 3.921104 TGATGCATGGGGCCTAATTAAA 58.079 40.909 2.46 0.00 43.89 1.52
2979 3413 3.896888 TGATGCATGGGGCCTAATTAAAG 59.103 43.478 2.46 0.00 43.89 1.85
2980 3414 2.676748 TGCATGGGGCCTAATTAAAGG 58.323 47.619 0.84 0.00 43.89 3.11
2981 3415 2.246067 TGCATGGGGCCTAATTAAAGGA 59.754 45.455 0.84 0.00 43.89 3.36
2982 3416 2.893489 GCATGGGGCCTAATTAAAGGAG 59.107 50.000 0.84 0.00 39.15 3.69
2983 3417 3.691311 GCATGGGGCCTAATTAAAGGAGT 60.691 47.826 0.84 0.00 39.15 3.85
2984 3418 3.662759 TGGGGCCTAATTAAAGGAGTG 57.337 47.619 0.84 0.00 39.15 3.51
2985 3419 2.307768 GGGGCCTAATTAAAGGAGTGC 58.692 52.381 0.84 0.00 39.15 4.40
2986 3420 2.091830 GGGGCCTAATTAAAGGAGTGCT 60.092 50.000 0.84 0.00 39.15 4.40
2987 3421 2.952310 GGGCCTAATTAAAGGAGTGCTG 59.048 50.000 0.84 0.00 39.15 4.41
2988 3422 2.359214 GGCCTAATTAAAGGAGTGCTGC 59.641 50.000 0.00 0.00 39.15 5.25
2989 3423 3.016736 GCCTAATTAAAGGAGTGCTGCA 58.983 45.455 0.00 0.00 39.15 4.41
2990 3424 3.633986 GCCTAATTAAAGGAGTGCTGCAT 59.366 43.478 5.27 0.00 39.15 3.96
2991 3425 4.498682 GCCTAATTAAAGGAGTGCTGCATG 60.499 45.833 5.27 0.00 39.15 4.06
2992 3426 3.515330 AATTAAAGGAGTGCTGCATGC 57.485 42.857 11.82 11.82 43.25 4.06
2993 3427 2.205022 TTAAAGGAGTGCTGCATGCT 57.795 45.000 20.33 0.00 43.37 3.79
2994 3428 2.205022 TAAAGGAGTGCTGCATGCTT 57.795 45.000 20.33 9.08 43.37 3.91
2995 3429 1.335145 AAAGGAGTGCTGCATGCTTT 58.665 45.000 20.33 18.32 43.37 3.51
2996 3430 1.335145 AAGGAGTGCTGCATGCTTTT 58.665 45.000 20.33 0.00 43.37 2.27
2997 3431 1.335145 AGGAGTGCTGCATGCTTTTT 58.665 45.000 20.33 0.36 43.37 1.94
2998 3432 2.517959 AGGAGTGCTGCATGCTTTTTA 58.482 42.857 20.33 0.00 43.37 1.52
2999 3433 2.892852 AGGAGTGCTGCATGCTTTTTAA 59.107 40.909 20.33 0.00 43.37 1.52
3000 3434 3.512724 AGGAGTGCTGCATGCTTTTTAAT 59.487 39.130 20.33 0.00 43.37 1.40
3001 3435 4.020839 AGGAGTGCTGCATGCTTTTTAATT 60.021 37.500 20.33 0.00 43.37 1.40
3002 3436 4.692155 GGAGTGCTGCATGCTTTTTAATTT 59.308 37.500 20.33 0.00 43.37 1.82
3003 3437 5.179929 GGAGTGCTGCATGCTTTTTAATTTT 59.820 36.000 20.33 0.00 43.37 1.82
3004 3438 5.992729 AGTGCTGCATGCTTTTTAATTTTG 58.007 33.333 20.33 0.00 43.37 2.44
3005 3439 5.528320 AGTGCTGCATGCTTTTTAATTTTGT 59.472 32.000 20.33 0.00 43.37 2.83
3006 3440 5.622041 GTGCTGCATGCTTTTTAATTTTGTG 59.378 36.000 20.33 0.00 43.37 3.33
3007 3441 5.148568 GCTGCATGCTTTTTAATTTTGTGG 58.851 37.500 20.33 0.00 38.95 4.17
3008 3442 5.686159 TGCATGCTTTTTAATTTTGTGGG 57.314 34.783 20.33 0.00 0.00 4.61
3009 3443 5.371526 TGCATGCTTTTTAATTTTGTGGGA 58.628 33.333 20.33 0.00 0.00 4.37
3010 3444 5.824624 TGCATGCTTTTTAATTTTGTGGGAA 59.175 32.000 20.33 0.00 0.00 3.97
3011 3445 6.017275 TGCATGCTTTTTAATTTTGTGGGAAG 60.017 34.615 20.33 0.00 0.00 3.46
3012 3446 6.568271 GCATGCTTTTTAATTTTGTGGGAAGG 60.568 38.462 11.37 0.00 0.00 3.46
3013 3447 6.240549 TGCTTTTTAATTTTGTGGGAAGGA 57.759 33.333 0.00 0.00 0.00 3.36
3014 3448 6.287525 TGCTTTTTAATTTTGTGGGAAGGAG 58.712 36.000 0.00 0.00 0.00 3.69
3015 3449 6.126911 TGCTTTTTAATTTTGTGGGAAGGAGT 60.127 34.615 0.00 0.00 0.00 3.85
3016 3450 7.070074 TGCTTTTTAATTTTGTGGGAAGGAGTA 59.930 33.333 0.00 0.00 0.00 2.59
3017 3451 8.094548 GCTTTTTAATTTTGTGGGAAGGAGTAT 58.905 33.333 0.00 0.00 0.00 2.12
3018 3452 9.996554 CTTTTTAATTTTGTGGGAAGGAGTATT 57.003 29.630 0.00 0.00 0.00 1.89
3019 3453 9.771534 TTTTTAATTTTGTGGGAAGGAGTATTG 57.228 29.630 0.00 0.00 0.00 1.90
3020 3454 5.405935 AATTTTGTGGGAAGGAGTATTGC 57.594 39.130 0.00 0.00 0.00 3.56
3021 3455 3.517296 TTTGTGGGAAGGAGTATTGCA 57.483 42.857 0.00 0.00 0.00 4.08
3022 3456 3.737559 TTGTGGGAAGGAGTATTGCAT 57.262 42.857 0.00 0.00 0.00 3.96
3023 3457 3.003394 TGTGGGAAGGAGTATTGCATG 57.997 47.619 0.00 0.00 0.00 4.06
3024 3458 1.678101 GTGGGAAGGAGTATTGCATGC 59.322 52.381 11.82 11.82 0.00 4.06
3025 3459 1.565759 TGGGAAGGAGTATTGCATGCT 59.434 47.619 20.33 1.26 0.00 3.79
3026 3460 1.952296 GGGAAGGAGTATTGCATGCTG 59.048 52.381 20.33 0.00 0.00 4.41
3027 3461 1.336125 GGAAGGAGTATTGCATGCTGC 59.664 52.381 20.33 2.95 45.29 5.25
3037 3471 2.983433 GCATGCTGCGACTCATACT 58.017 52.632 11.37 0.00 31.71 2.12
3038 3472 1.293924 GCATGCTGCGACTCATACTT 58.706 50.000 11.37 0.00 31.71 2.24
3039 3473 1.004185 GCATGCTGCGACTCATACTTG 60.004 52.381 11.37 0.00 31.71 3.16
3040 3474 1.004185 CATGCTGCGACTCATACTTGC 60.004 52.381 0.00 0.00 0.00 4.01
3041 3475 0.740868 TGCTGCGACTCATACTTGCC 60.741 55.000 0.00 0.00 0.00 4.52
3042 3476 0.740868 GCTGCGACTCATACTTGCCA 60.741 55.000 0.00 0.00 0.00 4.92
3043 3477 1.725641 CTGCGACTCATACTTGCCAA 58.274 50.000 0.00 0.00 0.00 4.52
3044 3478 2.076100 CTGCGACTCATACTTGCCAAA 58.924 47.619 0.00 0.00 0.00 3.28
3045 3479 1.804151 TGCGACTCATACTTGCCAAAC 59.196 47.619 0.00 0.00 0.00 2.93
3046 3480 2.076863 GCGACTCATACTTGCCAAACT 58.923 47.619 0.00 0.00 0.00 2.66
3047 3481 3.259064 GCGACTCATACTTGCCAAACTA 58.741 45.455 0.00 0.00 0.00 2.24
3048 3482 3.682858 GCGACTCATACTTGCCAAACTAA 59.317 43.478 0.00 0.00 0.00 2.24
3049 3483 4.153475 GCGACTCATACTTGCCAAACTAAA 59.847 41.667 0.00 0.00 0.00 1.85
3050 3484 5.163754 GCGACTCATACTTGCCAAACTAAAT 60.164 40.000 0.00 0.00 0.00 1.40
3051 3485 6.250819 CGACTCATACTTGCCAAACTAAATG 58.749 40.000 0.00 0.00 0.00 2.32
3052 3486 6.515272 ACTCATACTTGCCAAACTAAATGG 57.485 37.500 0.00 0.00 41.08 3.16
3053 3487 5.418840 ACTCATACTTGCCAAACTAAATGGG 59.581 40.000 0.00 0.00 38.44 4.00
3054 3488 5.575157 TCATACTTGCCAAACTAAATGGGA 58.425 37.500 0.00 0.00 38.44 4.37
3055 3489 6.194235 TCATACTTGCCAAACTAAATGGGAT 58.806 36.000 0.00 0.00 38.16 3.85
3056 3490 6.667414 TCATACTTGCCAAACTAAATGGGATT 59.333 34.615 0.00 0.00 38.16 3.01
3057 3491 5.823861 ACTTGCCAAACTAAATGGGATTT 57.176 34.783 0.00 0.00 38.16 2.17
3058 3492 6.186420 ACTTGCCAAACTAAATGGGATTTT 57.814 33.333 0.00 0.00 38.16 1.82
3059 3493 6.600388 ACTTGCCAAACTAAATGGGATTTTT 58.400 32.000 0.00 0.00 38.16 1.94
3060 3494 6.486320 ACTTGCCAAACTAAATGGGATTTTTG 59.514 34.615 0.00 0.00 38.16 2.44
3061 3495 5.312079 TGCCAAACTAAATGGGATTTTTGG 58.688 37.500 6.55 6.55 39.18 3.28
3062 3496 5.878332 CCAAACTAAATGGGATTTTTGGC 57.122 39.130 0.00 0.00 33.45 4.52
3063 3497 5.559770 CCAAACTAAATGGGATTTTTGGCT 58.440 37.500 0.00 0.00 33.45 4.75
3064 3498 5.412286 CCAAACTAAATGGGATTTTTGGCTG 59.588 40.000 0.00 0.00 33.45 4.85
3065 3499 4.206477 ACTAAATGGGATTTTTGGCTGC 57.794 40.909 0.00 0.00 33.82 5.25
3066 3500 3.582208 ACTAAATGGGATTTTTGGCTGCA 59.418 39.130 0.50 0.00 33.82 4.41
3067 3501 3.724732 AAATGGGATTTTTGGCTGCAT 57.275 38.095 0.50 0.00 0.00 3.96
3068 3502 2.702592 ATGGGATTTTTGGCTGCATG 57.297 45.000 0.50 0.00 0.00 4.06
3069 3503 0.614294 TGGGATTTTTGGCTGCATGG 59.386 50.000 0.50 0.00 0.00 3.66
3070 3504 0.903942 GGGATTTTTGGCTGCATGGA 59.096 50.000 0.50 0.00 0.00 3.41
3071 3505 1.278699 GGGATTTTTGGCTGCATGGAA 59.721 47.619 0.50 0.00 0.00 3.53
3072 3506 2.092807 GGGATTTTTGGCTGCATGGAAT 60.093 45.455 0.50 0.00 0.00 3.01
3074 3508 2.476126 TTTTTGGCTGCATGGAATGG 57.524 45.000 0.50 0.00 46.86 3.16
3075 3509 1.642112 TTTTGGCTGCATGGAATGGA 58.358 45.000 0.50 0.00 46.86 3.41
3076 3510 1.868713 TTTGGCTGCATGGAATGGAT 58.131 45.000 0.50 0.00 46.12 3.41
3077 3511 2.752075 TTGGCTGCATGGAATGGATA 57.248 45.000 0.50 0.00 46.12 2.59
3078 3512 1.985473 TGGCTGCATGGAATGGATAC 58.015 50.000 0.50 0.00 46.12 2.24
3092 3526 3.251479 TGGATACACATCTCACACTGC 57.749 47.619 0.00 0.00 46.17 4.40
3093 3527 2.566724 TGGATACACATCTCACACTGCA 59.433 45.455 0.00 0.00 46.17 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 6.830324 TCTCAAGATTGGTTTAGCTTATGCAT 59.170 34.615 3.79 3.79 42.74 3.96
20 21 9.561069 GGAGCTATAATTCTCAAGATTGGTTTA 57.439 33.333 0.00 0.00 0.00 2.01
37 38 4.174704 TCGGACTTAGTGGGAGCTATAA 57.825 45.455 0.00 0.00 0.00 0.98
53 54 4.098196 AGCCTACTTCTCAAAGTATCGGAC 59.902 45.833 7.45 1.59 44.82 4.79
54 55 4.279145 AGCCTACTTCTCAAAGTATCGGA 58.721 43.478 7.45 0.00 44.82 4.55
55 56 4.657436 AGCCTACTTCTCAAAGTATCGG 57.343 45.455 0.00 0.27 44.82 4.18
56 57 6.261381 AGAGTAGCCTACTTCTCAAAGTATCG 59.739 42.308 5.74 0.00 44.82 2.92
266 268 3.570125 TCGAGTCAGGGCTAATCATACAG 59.430 47.826 0.00 0.00 0.00 2.74
285 287 2.658373 TACGTGCTAAAAGGCATCGA 57.342 45.000 0.00 0.00 44.34 3.59
289 291 4.004314 TGCTAATTACGTGCTAAAAGGCA 58.996 39.130 0.00 0.00 40.15 4.75
399 404 5.908341 TCATACCCAAGGAAAACAACAAAC 58.092 37.500 0.00 0.00 0.00 2.93
500 512 4.640771 AAGGCTTGTCTTGTATCCAGAA 57.359 40.909 0.00 0.00 0.00 3.02
504 516 2.819608 TGCAAAGGCTTGTCTTGTATCC 59.180 45.455 0.00 0.00 41.91 2.59
509 521 2.466846 CAACTGCAAAGGCTTGTCTTG 58.533 47.619 0.00 0.00 41.91 3.02
540 552 6.732531 ACGAATTAAACCTTAAGTACAGCC 57.267 37.500 0.97 0.00 0.00 4.85
582 594 2.819477 TTTTTCACCACAGCCCAGG 58.181 52.632 0.00 0.00 0.00 4.45
603 615 4.981674 TGGCATCGAAAAATTGTTCAAGTC 59.018 37.500 9.05 0.11 0.00 3.01
604 616 4.942852 TGGCATCGAAAAATTGTTCAAGT 58.057 34.783 9.05 0.00 0.00 3.16
619 709 3.287312 ACATGTTTCAACTTGGCATCG 57.713 42.857 9.62 0.00 38.11 3.84
630 721 1.943340 TGCAACTGCGTACATGTTTCA 59.057 42.857 2.30 0.00 45.83 2.69
635 726 1.135972 GGACTTGCAACTGCGTACATG 60.136 52.381 0.00 0.00 45.83 3.21
637 728 0.105964 AGGACTTGCAACTGCGTACA 59.894 50.000 0.00 0.00 45.83 2.90
641 736 0.602638 TACCAGGACTTGCAACTGCG 60.603 55.000 9.46 6.35 45.83 5.18
643 738 2.550830 ACTACCAGGACTTGCAACTG 57.449 50.000 8.25 8.25 0.00 3.16
651 746 0.323542 ACGCTGCTACTACCAGGACT 60.324 55.000 0.00 0.00 0.00 3.85
654 749 1.065701 CTGTACGCTGCTACTACCAGG 59.934 57.143 0.00 0.00 0.00 4.45
657 752 1.334243 CCTCTGTACGCTGCTACTACC 59.666 57.143 0.00 0.00 0.00 3.18
658 753 2.015587 ACCTCTGTACGCTGCTACTAC 58.984 52.381 0.00 0.00 0.00 2.73
665 760 1.010935 CAGCACACCTCTGTACGCTG 61.011 60.000 0.00 0.00 40.45 5.18
672 778 0.036671 TCATCTGCAGCACACCTCTG 60.037 55.000 9.47 0.00 34.79 3.35
674 780 0.248565 TCTCATCTGCAGCACACCTC 59.751 55.000 9.47 0.00 0.00 3.85
757 1141 5.462240 AGAGAGAGAGAGAGAGAGAGATGA 58.538 45.833 0.00 0.00 0.00 2.92
760 1144 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
761 1145 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
762 1146 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
763 1147 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
764 1148 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
765 1149 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
766 1150 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
767 1151 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
768 1152 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
769 1153 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
770 1154 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
771 1155 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
772 1156 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
773 1157 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
774 1158 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
775 1159 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
776 1160 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
777 1161 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
778 1162 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
779 1163 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
780 1164 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
781 1165 4.023279 CGAGAGAGAGAGAGAGAGAGAGAG 60.023 54.167 0.00 0.00 0.00 3.20
782 1166 3.885901 CGAGAGAGAGAGAGAGAGAGAGA 59.114 52.174 0.00 0.00 0.00 3.10
783 1167 3.634448 ACGAGAGAGAGAGAGAGAGAGAG 59.366 52.174 0.00 0.00 0.00 3.20
784 1168 3.632333 ACGAGAGAGAGAGAGAGAGAGA 58.368 50.000 0.00 0.00 0.00 3.10
785 1169 4.392921 AACGAGAGAGAGAGAGAGAGAG 57.607 50.000 0.00 0.00 0.00 3.20
786 1170 4.098960 GGTAACGAGAGAGAGAGAGAGAGA 59.901 50.000 0.00 0.00 0.00 3.10
787 1171 4.099573 AGGTAACGAGAGAGAGAGAGAGAG 59.900 50.000 0.00 0.00 46.39 3.20
788 1172 4.028131 AGGTAACGAGAGAGAGAGAGAGA 58.972 47.826 0.00 0.00 46.39 3.10
789 1173 4.402056 AGGTAACGAGAGAGAGAGAGAG 57.598 50.000 0.00 0.00 46.39 3.20
790 1174 4.829872 AAGGTAACGAGAGAGAGAGAGA 57.170 45.455 0.00 0.00 46.39 3.10
791 1175 5.646360 AGAAAAGGTAACGAGAGAGAGAGAG 59.354 44.000 0.00 0.00 46.39 3.20
809 1193 7.961827 GCAGTGATAATCTTCAGACAAGAAAAG 59.038 37.037 0.00 0.00 0.00 2.27
863 1254 3.005155 GCTCCTTGCAAGTCAAAGATTGT 59.995 43.478 24.35 0.00 42.31 2.71
864 1255 3.255149 AGCTCCTTGCAAGTCAAAGATTG 59.745 43.478 24.35 6.47 45.94 2.67
865 1256 3.494332 AGCTCCTTGCAAGTCAAAGATT 58.506 40.909 24.35 3.88 45.94 2.40
998 1404 3.303938 TGTCTCTCCTTCATCTCCATCC 58.696 50.000 0.00 0.00 0.00 3.51
1290 1696 3.612247 CTCCCACCACTTGCCGAGG 62.612 68.421 0.00 0.00 0.00 4.63
1386 1792 1.153745 GAGCAGCCACTCGTACCTG 60.154 63.158 0.00 0.00 0.00 4.00
1633 2045 2.584418 CGTCTCCGCCATCTGCTG 60.584 66.667 0.00 0.00 38.05 4.41
1634 2046 3.842923 CCGTCTCCGCCATCTGCT 61.843 66.667 0.00 0.00 38.05 4.24
1724 2136 4.079850 CAGCACTCGGCCAGCTCT 62.080 66.667 2.24 0.00 46.50 4.09
1793 2205 2.507992 CGCTTCAGCCTCCACGAG 60.508 66.667 0.00 0.00 37.91 4.18
2199 2615 2.614983 GTGAAGCTTCCAACGGTTGTAA 59.385 45.455 23.42 9.23 0.00 2.41
2200 2616 2.158871 AGTGAAGCTTCCAACGGTTGTA 60.159 45.455 23.42 0.60 0.00 2.41
2201 2617 1.021968 GTGAAGCTTCCAACGGTTGT 58.978 50.000 23.42 0.00 0.00 3.32
2354 2771 8.249638 TCAAATGATTTCTTGTTGAACTTGTCA 58.750 29.630 0.00 0.00 33.88 3.58
2374 2791 1.298602 TCGATGCCCACGATCAAATG 58.701 50.000 0.00 0.00 34.85 2.32
2392 2814 9.080915 GGATCTTTTTCATAGAAGTTGCATTTC 57.919 33.333 0.00 0.00 0.00 2.17
2437 2859 5.818136 TTCTGTTTGATAGCTTACCATGC 57.182 39.130 0.00 0.00 0.00 4.06
2457 2879 8.816144 TGAAATCATTTGTTGCACTACTTTTTC 58.184 29.630 0.00 0.00 0.00 2.29
2460 2882 7.385752 CCATGAAATCATTTGTTGCACTACTTT 59.614 33.333 0.00 0.00 33.61 2.66
2484 2917 7.817418 ACTTTTTCTGTTTGATAGCTTACCA 57.183 32.000 0.00 0.00 0.00 3.25
2486 2919 9.813080 CACTACTTTTTCTGTTTGATAGCTTAC 57.187 33.333 0.00 0.00 0.00 2.34
2487 2920 8.504005 GCACTACTTTTTCTGTTTGATAGCTTA 58.496 33.333 0.00 0.00 0.00 3.09
2489 2922 6.486657 TGCACTACTTTTTCTGTTTGATAGCT 59.513 34.615 0.00 0.00 0.00 3.32
2491 2924 8.128582 TGTTGCACTACTTTTTCTGTTTGATAG 58.871 33.333 0.00 0.00 0.00 2.08
2492 2925 7.990917 TGTTGCACTACTTTTTCTGTTTGATA 58.009 30.769 0.00 0.00 0.00 2.15
2493 2926 6.862209 TGTTGCACTACTTTTTCTGTTTGAT 58.138 32.000 0.00 0.00 0.00 2.57
2495 2928 5.516339 CCTGTTGCACTACTTTTTCTGTTTG 59.484 40.000 0.00 0.00 0.00 2.93
2497 2930 4.097892 CCCTGTTGCACTACTTTTTCTGTT 59.902 41.667 0.00 0.00 0.00 3.16
2498 2931 3.632145 CCCTGTTGCACTACTTTTTCTGT 59.368 43.478 0.00 0.00 0.00 3.41
2499 2932 3.632145 ACCCTGTTGCACTACTTTTTCTG 59.368 43.478 0.00 0.00 0.00 3.02
2501 2934 3.795488 GCACCCTGTTGCACTACTTTTTC 60.795 47.826 0.00 0.00 42.49 2.29
2502 2935 2.100749 GCACCCTGTTGCACTACTTTTT 59.899 45.455 0.00 0.00 42.49 1.94
2503 2936 1.681264 GCACCCTGTTGCACTACTTTT 59.319 47.619 0.00 0.00 42.49 2.27
2504 2937 1.318576 GCACCCTGTTGCACTACTTT 58.681 50.000 0.00 0.00 42.49 2.66
2505 2938 3.021451 GCACCCTGTTGCACTACTT 57.979 52.632 0.00 0.00 42.49 2.24
2506 2939 4.800554 GCACCCTGTTGCACTACT 57.199 55.556 0.00 0.00 42.49 2.57
2515 2948 1.630369 TCTCTTAGCAATGCACCCTGT 59.370 47.619 8.35 0.00 0.00 4.00
2552 2986 3.093814 AGATTGAATGCTGATGCCAACA 58.906 40.909 0.00 0.00 38.71 3.33
2577 3011 7.636326 TGAACCTTCGTATTCTTGAGAAAAAC 58.364 34.615 0.00 0.00 37.61 2.43
2594 3028 5.926542 GGCCTTTCTTGTTAAATGAACCTTC 59.073 40.000 0.00 0.00 37.22 3.46
2633 3067 4.320676 AGGATAGCCAAGGTTGTGACCG 62.321 54.545 0.00 0.00 43.53 4.79
2634 3068 1.282157 AGGATAGCCAAGGTTGTGACC 59.718 52.381 0.00 0.00 40.82 4.02
2635 3069 2.027192 TGAGGATAGCCAAGGTTGTGAC 60.027 50.000 0.00 0.00 36.29 3.67
2636 3070 2.265367 TGAGGATAGCCAAGGTTGTGA 58.735 47.619 0.00 0.00 36.29 3.58
2637 3071 2.787473 TGAGGATAGCCAAGGTTGTG 57.213 50.000 0.00 0.00 36.29 3.33
2638 3072 2.846206 TGATGAGGATAGCCAAGGTTGT 59.154 45.455 0.00 0.00 36.29 3.32
2639 3073 3.118112 ACTGATGAGGATAGCCAAGGTTG 60.118 47.826 0.00 0.00 36.29 3.77
2640 3074 3.118531 ACTGATGAGGATAGCCAAGGTT 58.881 45.455 0.00 0.00 36.29 3.50
2641 3075 2.769209 ACTGATGAGGATAGCCAAGGT 58.231 47.619 0.00 0.00 36.29 3.50
2642 3076 3.853355 AACTGATGAGGATAGCCAAGG 57.147 47.619 0.00 0.00 36.29 3.61
2643 3077 5.235186 CGTTAAACTGATGAGGATAGCCAAG 59.765 44.000 0.00 0.00 36.29 3.61
2644 3078 5.116180 CGTTAAACTGATGAGGATAGCCAA 58.884 41.667 0.00 0.00 36.29 4.52
2645 3079 4.442893 CCGTTAAACTGATGAGGATAGCCA 60.443 45.833 0.00 0.00 36.29 4.75
2646 3080 4.058817 CCGTTAAACTGATGAGGATAGCC 58.941 47.826 0.00 0.00 0.00 3.93
2647 3081 3.495001 GCCGTTAAACTGATGAGGATAGC 59.505 47.826 0.00 0.00 0.00 2.97
2648 3082 3.736252 CGCCGTTAAACTGATGAGGATAG 59.264 47.826 0.00 0.00 0.00 2.08
2649 3083 3.491964 CCGCCGTTAAACTGATGAGGATA 60.492 47.826 0.00 0.00 0.00 2.59
2650 3084 2.550978 CGCCGTTAAACTGATGAGGAT 58.449 47.619 0.00 0.00 0.00 3.24
2651 3085 1.404986 CCGCCGTTAAACTGATGAGGA 60.405 52.381 0.00 0.00 0.00 3.71
2652 3086 1.006832 CCGCCGTTAAACTGATGAGG 58.993 55.000 0.00 0.00 0.00 3.86
2653 3087 1.006832 CCCGCCGTTAAACTGATGAG 58.993 55.000 0.00 0.00 0.00 2.90
2654 3088 0.609151 TCCCGCCGTTAAACTGATGA 59.391 50.000 0.00 0.00 0.00 2.92
2655 3089 1.444836 TTCCCGCCGTTAAACTGATG 58.555 50.000 0.00 0.00 0.00 3.07
2656 3090 2.188062 TTTCCCGCCGTTAAACTGAT 57.812 45.000 0.00 0.00 0.00 2.90
2657 3091 1.964552 TTTTCCCGCCGTTAAACTGA 58.035 45.000 0.00 0.00 0.00 3.41
2658 3092 2.226912 TCATTTTCCCGCCGTTAAACTG 59.773 45.455 0.00 0.00 0.00 3.16
2659 3093 2.506444 TCATTTTCCCGCCGTTAAACT 58.494 42.857 0.00 0.00 0.00 2.66
2660 3094 2.993449 TCATTTTCCCGCCGTTAAAC 57.007 45.000 0.00 0.00 0.00 2.01
2661 3095 3.506455 TGAATCATTTTCCCGCCGTTAAA 59.494 39.130 0.00 0.00 0.00 1.52
2662 3096 3.082548 TGAATCATTTTCCCGCCGTTAA 58.917 40.909 0.00 0.00 0.00 2.01
2663 3097 2.712709 TGAATCATTTTCCCGCCGTTA 58.287 42.857 0.00 0.00 0.00 3.18
2664 3098 1.540267 TGAATCATTTTCCCGCCGTT 58.460 45.000 0.00 0.00 0.00 4.44
2665 3099 1.472480 CTTGAATCATTTTCCCGCCGT 59.528 47.619 0.00 0.00 0.00 5.68
2666 3100 1.798813 GCTTGAATCATTTTCCCGCCG 60.799 52.381 0.00 0.00 0.00 6.46
2667 3101 1.471501 GGCTTGAATCATTTTCCCGCC 60.472 52.381 0.00 0.00 0.00 6.13
2668 3102 1.478105 AGGCTTGAATCATTTTCCCGC 59.522 47.619 0.00 0.00 0.00 6.13
2669 3103 3.019564 AGAGGCTTGAATCATTTTCCCG 58.980 45.455 0.00 0.00 0.00 5.14
2670 3104 4.708909 AGAAGAGGCTTGAATCATTTTCCC 59.291 41.667 0.00 0.00 0.00 3.97
2671 3105 5.651576 AGAGAAGAGGCTTGAATCATTTTCC 59.348 40.000 0.00 0.00 0.00 3.13
2672 3106 6.756299 AGAGAAGAGGCTTGAATCATTTTC 57.244 37.500 0.00 0.00 0.00 2.29
2673 3107 6.492772 ACAAGAGAAGAGGCTTGAATCATTTT 59.507 34.615 9.31 0.00 43.11 1.82
2674 3108 6.008960 ACAAGAGAAGAGGCTTGAATCATTT 58.991 36.000 9.31 0.00 43.11 2.32
2675 3109 5.568392 ACAAGAGAAGAGGCTTGAATCATT 58.432 37.500 9.31 0.00 43.11 2.57
2676 3110 5.176741 ACAAGAGAAGAGGCTTGAATCAT 57.823 39.130 9.31 0.00 43.11 2.45
2677 3111 4.630644 ACAAGAGAAGAGGCTTGAATCA 57.369 40.909 9.31 0.00 43.11 2.57
2678 3112 5.956068 AAACAAGAGAAGAGGCTTGAATC 57.044 39.130 9.31 0.00 43.11 2.52
2679 3113 7.001073 AGTAAAACAAGAGAAGAGGCTTGAAT 58.999 34.615 9.31 0.00 43.11 2.57
2680 3114 6.260936 CAGTAAAACAAGAGAAGAGGCTTGAA 59.739 38.462 9.31 0.00 43.11 2.69
2681 3115 5.760253 CAGTAAAACAAGAGAAGAGGCTTGA 59.240 40.000 9.31 0.00 43.11 3.02
2682 3116 5.049129 CCAGTAAAACAAGAGAAGAGGCTTG 60.049 44.000 0.00 0.00 45.27 4.01
2683 3117 5.066593 CCAGTAAAACAAGAGAAGAGGCTT 58.933 41.667 0.00 0.00 0.00 4.35
2684 3118 4.103311 ACCAGTAAAACAAGAGAAGAGGCT 59.897 41.667 0.00 0.00 0.00 4.58
2685 3119 4.390264 ACCAGTAAAACAAGAGAAGAGGC 58.610 43.478 0.00 0.00 0.00 4.70
2686 3120 4.998033 GGACCAGTAAAACAAGAGAAGAGG 59.002 45.833 0.00 0.00 0.00 3.69
2687 3121 4.998033 GGGACCAGTAAAACAAGAGAAGAG 59.002 45.833 0.00 0.00 0.00 2.85
2688 3122 4.410883 TGGGACCAGTAAAACAAGAGAAGA 59.589 41.667 0.00 0.00 0.00 2.87
2689 3123 4.714632 TGGGACCAGTAAAACAAGAGAAG 58.285 43.478 0.00 0.00 0.00 2.85
2690 3124 4.445735 CCTGGGACCAGTAAAACAAGAGAA 60.446 45.833 16.61 0.00 42.15 2.87
2691 3125 3.072476 CCTGGGACCAGTAAAACAAGAGA 59.928 47.826 16.61 0.00 42.15 3.10
2692 3126 3.412386 CCTGGGACCAGTAAAACAAGAG 58.588 50.000 16.61 0.00 42.15 2.85
2693 3127 2.107552 CCCTGGGACCAGTAAAACAAGA 59.892 50.000 16.61 0.00 42.15 3.02
2694 3128 2.514803 CCCTGGGACCAGTAAAACAAG 58.485 52.381 16.61 0.00 42.15 3.16
2695 3129 1.479757 GCCCTGGGACCAGTAAAACAA 60.480 52.381 19.27 0.00 42.15 2.83
2696 3130 0.111639 GCCCTGGGACCAGTAAAACA 59.888 55.000 19.27 0.00 42.15 2.83
2697 3131 0.611062 GGCCCTGGGACCAGTAAAAC 60.611 60.000 19.27 0.00 42.15 2.43
2698 3132 1.771646 GGCCCTGGGACCAGTAAAA 59.228 57.895 19.27 0.00 42.15 1.52
2699 3133 2.598787 CGGCCCTGGGACCAGTAAA 61.599 63.158 19.27 0.00 42.15 2.01
2700 3134 3.006728 CGGCCCTGGGACCAGTAA 61.007 66.667 19.27 0.00 42.15 2.24
2713 3147 2.456287 CTAAGATGCTAGGGCCGGCC 62.456 65.000 38.57 38.57 37.74 6.13
2714 3148 1.004440 CTAAGATGCTAGGGCCGGC 60.004 63.158 21.18 21.18 37.74 6.13
2715 3149 0.605589 CTCTAAGATGCTAGGGCCGG 59.394 60.000 0.00 0.00 37.74 6.13
2716 3150 0.605589 CCTCTAAGATGCTAGGGCCG 59.394 60.000 0.00 0.00 37.74 6.13
2717 3151 0.323302 GCCTCTAAGATGCTAGGGCC 59.677 60.000 0.00 0.00 37.74 5.80
2718 3152 0.323302 GGCCTCTAAGATGCTAGGGC 59.677 60.000 0.00 0.00 45.93 5.19
2719 3153 0.980423 GGGCCTCTAAGATGCTAGGG 59.020 60.000 0.84 0.00 0.00 3.53
2720 3154 2.022718 AGGGCCTCTAAGATGCTAGG 57.977 55.000 0.00 0.00 0.00 3.02
2721 3155 2.703007 ACAAGGGCCTCTAAGATGCTAG 59.297 50.000 6.46 0.00 0.00 3.42
2722 3156 2.435805 CACAAGGGCCTCTAAGATGCTA 59.564 50.000 6.46 0.00 0.00 3.49
2723 3157 1.211457 CACAAGGGCCTCTAAGATGCT 59.789 52.381 6.46 0.00 0.00 3.79
2724 3158 1.673168 CACAAGGGCCTCTAAGATGC 58.327 55.000 6.46 0.00 0.00 3.91
2725 3159 1.673168 GCACAAGGGCCTCTAAGATG 58.327 55.000 6.46 2.06 0.00 2.90
2726 3160 0.179000 CGCACAAGGGCCTCTAAGAT 59.821 55.000 6.46 0.00 0.00 2.40
2727 3161 0.902984 TCGCACAAGGGCCTCTAAGA 60.903 55.000 6.46 0.00 0.00 2.10
2728 3162 0.036388 TTCGCACAAGGGCCTCTAAG 60.036 55.000 6.46 0.00 0.00 2.18
2729 3163 0.321298 GTTCGCACAAGGGCCTCTAA 60.321 55.000 6.46 0.00 0.00 2.10
2730 3164 1.192146 AGTTCGCACAAGGGCCTCTA 61.192 55.000 6.46 0.00 0.00 2.43
2731 3165 2.032681 GTTCGCACAAGGGCCTCT 59.967 61.111 6.46 0.00 0.00 3.69
2732 3166 1.578206 GAAGTTCGCACAAGGGCCTC 61.578 60.000 6.46 0.00 0.00 4.70
2733 3167 1.600916 GAAGTTCGCACAAGGGCCT 60.601 57.895 0.00 0.00 0.00 5.19
2734 3168 1.600916 AGAAGTTCGCACAAGGGCC 60.601 57.895 0.00 0.00 0.00 5.80
2735 3169 0.884704 TCAGAAGTTCGCACAAGGGC 60.885 55.000 0.00 0.00 0.00 5.19
2736 3170 1.264288 GTTCAGAAGTTCGCACAAGGG 59.736 52.381 0.00 0.00 0.00 3.95
2737 3171 2.213499 AGTTCAGAAGTTCGCACAAGG 58.787 47.619 0.00 0.00 0.00 3.61
2738 3172 2.221981 GGAGTTCAGAAGTTCGCACAAG 59.778 50.000 0.00 0.00 0.00 3.16
2739 3173 2.210116 GGAGTTCAGAAGTTCGCACAA 58.790 47.619 0.00 0.00 0.00 3.33
2740 3174 1.138069 TGGAGTTCAGAAGTTCGCACA 59.862 47.619 0.00 0.00 0.00 4.57
2741 3175 1.527311 GTGGAGTTCAGAAGTTCGCAC 59.473 52.381 5.08 3.77 0.00 5.34
2742 3176 1.540363 GGTGGAGTTCAGAAGTTCGCA 60.540 52.381 11.34 0.00 0.00 5.10
2743 3177 1.149148 GGTGGAGTTCAGAAGTTCGC 58.851 55.000 1.46 1.46 0.00 4.70
2744 3178 1.419374 CGGTGGAGTTCAGAAGTTCG 58.581 55.000 0.00 0.00 0.00 3.95
2745 3179 1.797025 CCGGTGGAGTTCAGAAGTTC 58.203 55.000 0.00 0.00 0.00 3.01
2746 3180 0.250338 GCCGGTGGAGTTCAGAAGTT 60.250 55.000 1.90 0.00 0.00 2.66
2747 3181 1.371558 GCCGGTGGAGTTCAGAAGT 59.628 57.895 1.90 0.00 0.00 3.01
2748 3182 1.376037 GGCCGGTGGAGTTCAGAAG 60.376 63.158 1.90 0.00 0.00 2.85
2749 3183 1.488705 ATGGCCGGTGGAGTTCAGAA 61.489 55.000 1.90 0.00 0.00 3.02
2750 3184 1.918293 ATGGCCGGTGGAGTTCAGA 60.918 57.895 1.90 0.00 0.00 3.27
2751 3185 1.746615 CATGGCCGGTGGAGTTCAG 60.747 63.158 1.90 0.00 0.00 3.02
2752 3186 2.350895 CATGGCCGGTGGAGTTCA 59.649 61.111 1.90 0.00 0.00 3.18
2753 3187 2.438434 CCATGGCCGGTGGAGTTC 60.438 66.667 19.58 0.00 39.12 3.01
2754 3188 4.047125 CCCATGGCCGGTGGAGTT 62.047 66.667 24.49 0.00 39.12 3.01
2778 3212 2.743928 GTCAGAGCCGTGCCAAGG 60.744 66.667 0.00 0.00 0.00 3.61
2779 3213 2.031516 CAGTCAGAGCCGTGCCAAG 61.032 63.158 0.00 0.00 0.00 3.61
2780 3214 2.031012 CAGTCAGAGCCGTGCCAA 59.969 61.111 0.00 0.00 0.00 4.52
2781 3215 4.687215 GCAGTCAGAGCCGTGCCA 62.687 66.667 0.00 0.00 0.00 4.92
2788 3222 0.457851 ATAGTCGTGGCAGTCAGAGC 59.542 55.000 0.00 0.00 0.00 4.09
2789 3223 1.745653 TGATAGTCGTGGCAGTCAGAG 59.254 52.381 0.00 0.00 0.00 3.35
2790 3224 1.472878 GTGATAGTCGTGGCAGTCAGA 59.527 52.381 0.00 0.00 0.00 3.27
2791 3225 1.469940 GGTGATAGTCGTGGCAGTCAG 60.470 57.143 0.00 0.00 0.00 3.51
2792 3226 0.530744 GGTGATAGTCGTGGCAGTCA 59.469 55.000 0.00 0.00 0.00 3.41
2793 3227 0.530744 TGGTGATAGTCGTGGCAGTC 59.469 55.000 0.00 0.00 0.00 3.51
2794 3228 0.973632 TTGGTGATAGTCGTGGCAGT 59.026 50.000 0.00 0.00 0.00 4.40
2795 3229 2.315925 ATTGGTGATAGTCGTGGCAG 57.684 50.000 0.00 0.00 0.00 4.85
2796 3230 3.897141 TTATTGGTGATAGTCGTGGCA 57.103 42.857 0.00 0.00 0.00 4.92
2797 3231 4.127171 ACATTATTGGTGATAGTCGTGGC 58.873 43.478 0.00 0.00 0.00 5.01
2798 3232 5.584649 ACAACATTATTGGTGATAGTCGTGG 59.415 40.000 9.57 0.00 43.67 4.94
2799 3233 6.456853 CCACAACATTATTGGTGATAGTCGTG 60.457 42.308 9.57 0.00 43.67 4.35
2800 3234 5.584649 CCACAACATTATTGGTGATAGTCGT 59.415 40.000 9.57 0.00 43.67 4.34
2801 3235 5.504010 GCCACAACATTATTGGTGATAGTCG 60.504 44.000 9.57 0.00 43.67 4.18
2802 3236 5.356751 TGCCACAACATTATTGGTGATAGTC 59.643 40.000 9.57 0.00 43.67 2.59
2803 3237 5.260424 TGCCACAACATTATTGGTGATAGT 58.740 37.500 9.57 0.00 43.67 2.12
2804 3238 5.221106 CCTGCCACAACATTATTGGTGATAG 60.221 44.000 9.57 2.63 43.67 2.08
2805 3239 4.644234 CCTGCCACAACATTATTGGTGATA 59.356 41.667 9.57 0.00 43.67 2.15
2806 3240 3.448301 CCTGCCACAACATTATTGGTGAT 59.552 43.478 9.57 0.00 43.67 3.06
2807 3241 2.824936 CCTGCCACAACATTATTGGTGA 59.175 45.455 9.57 0.00 43.67 4.02
2808 3242 2.562298 ACCTGCCACAACATTATTGGTG 59.438 45.455 1.10 1.10 46.51 4.17
2809 3243 2.562298 CACCTGCCACAACATTATTGGT 59.438 45.455 0.00 0.00 32.50 3.67
2810 3244 2.562298 ACACCTGCCACAACATTATTGG 59.438 45.455 0.00 0.00 0.00 3.16
2811 3245 3.005684 ACACACCTGCCACAACATTATTG 59.994 43.478 0.00 0.00 0.00 1.90
2812 3246 3.230134 ACACACCTGCCACAACATTATT 58.770 40.909 0.00 0.00 0.00 1.40
2813 3247 2.875296 ACACACCTGCCACAACATTAT 58.125 42.857 0.00 0.00 0.00 1.28
2814 3248 2.356665 ACACACCTGCCACAACATTA 57.643 45.000 0.00 0.00 0.00 1.90
2815 3249 2.229792 CTACACACCTGCCACAACATT 58.770 47.619 0.00 0.00 0.00 2.71
2816 3250 1.142870 ACTACACACCTGCCACAACAT 59.857 47.619 0.00 0.00 0.00 2.71
2817 3251 0.544223 ACTACACACCTGCCACAACA 59.456 50.000 0.00 0.00 0.00 3.33
2818 3252 0.944386 CACTACACACCTGCCACAAC 59.056 55.000 0.00 0.00 0.00 3.32
2819 3253 0.179032 CCACTACACACCTGCCACAA 60.179 55.000 0.00 0.00 0.00 3.33
2820 3254 1.449782 CCACTACACACCTGCCACA 59.550 57.895 0.00 0.00 0.00 4.17
2821 3255 1.966451 GCCACTACACACCTGCCAC 60.966 63.158 0.00 0.00 0.00 5.01
2822 3256 2.146724 AGCCACTACACACCTGCCA 61.147 57.895 0.00 0.00 0.00 4.92
2823 3257 1.672356 CAGCCACTACACACCTGCC 60.672 63.158 0.00 0.00 0.00 4.85
2824 3258 2.328099 GCAGCCACTACACACCTGC 61.328 63.158 0.00 0.00 41.57 4.85
2825 3259 2.029288 CGCAGCCACTACACACCTG 61.029 63.158 0.00 0.00 0.00 4.00
2826 3260 2.207229 TCGCAGCCACTACACACCT 61.207 57.895 0.00 0.00 0.00 4.00
2827 3261 2.027625 GTCGCAGCCACTACACACC 61.028 63.158 0.00 0.00 0.00 4.16
2828 3262 2.027625 GGTCGCAGCCACTACACAC 61.028 63.158 0.00 0.00 0.00 3.82
2829 3263 2.342279 GGTCGCAGCCACTACACA 59.658 61.111 0.00 0.00 0.00 3.72
2830 3264 2.434359 GGGTCGCAGCCACTACAC 60.434 66.667 0.00 0.00 35.40 2.90
2831 3265 4.063967 CGGGTCGCAGCCACTACA 62.064 66.667 5.45 0.00 34.89 2.74
2832 3266 3.984200 GACGGGTCGCAGCCACTAC 62.984 68.421 5.45 0.00 34.89 2.73
2833 3267 3.755628 GACGGGTCGCAGCCACTA 61.756 66.667 5.45 0.00 34.89 2.74
2851 3285 2.365408 ATCTCGTTGTCGGTTCTTCC 57.635 50.000 0.00 0.00 37.69 3.46
2852 3286 3.314553 TGAATCTCGTTGTCGGTTCTTC 58.685 45.455 0.00 0.00 37.69 2.87
2853 3287 3.380479 TGAATCTCGTTGTCGGTTCTT 57.620 42.857 0.00 0.00 37.69 2.52
2854 3288 3.512680 GATGAATCTCGTTGTCGGTTCT 58.487 45.455 0.00 0.00 37.69 3.01
2855 3289 2.603560 GGATGAATCTCGTTGTCGGTTC 59.396 50.000 0.00 0.00 37.69 3.62
2856 3290 2.028476 TGGATGAATCTCGTTGTCGGTT 60.028 45.455 0.00 0.00 37.69 4.44
2857 3291 1.548719 TGGATGAATCTCGTTGTCGGT 59.451 47.619 0.00 0.00 37.69 4.69
2858 3292 2.293677 TGGATGAATCTCGTTGTCGG 57.706 50.000 0.00 0.00 37.69 4.79
2859 3293 2.028045 CGTTGGATGAATCTCGTTGTCG 59.972 50.000 0.00 0.00 38.55 4.35
2860 3294 3.250744 TCGTTGGATGAATCTCGTTGTC 58.749 45.455 0.00 0.00 0.00 3.18
2861 3295 3.056821 TCTCGTTGGATGAATCTCGTTGT 60.057 43.478 0.00 0.00 0.00 3.32
2862 3296 3.511699 TCTCGTTGGATGAATCTCGTTG 58.488 45.455 0.00 0.00 0.00 4.10
2863 3297 3.868757 TCTCGTTGGATGAATCTCGTT 57.131 42.857 0.00 0.00 0.00 3.85
2864 3298 3.868757 TTCTCGTTGGATGAATCTCGT 57.131 42.857 0.00 0.00 0.00 4.18
2865 3299 5.530519 TTTTTCTCGTTGGATGAATCTCG 57.469 39.130 0.00 0.00 0.00 4.04
2866 3300 7.076842 TGATTTTTCTCGTTGGATGAATCTC 57.923 36.000 0.00 0.00 0.00 2.75
2867 3301 7.636150 ATGATTTTTCTCGTTGGATGAATCT 57.364 32.000 0.00 0.00 0.00 2.40
2868 3302 8.112099 CAATGATTTTTCTCGTTGGATGAATC 57.888 34.615 0.00 0.00 38.12 2.52
2876 3310 4.744137 TGCAACCAATGATTTTTCTCGTTG 59.256 37.500 0.00 0.00 40.37 4.10
2877 3311 4.942852 TGCAACCAATGATTTTTCTCGTT 58.057 34.783 0.00 0.00 0.00 3.85
2878 3312 4.582701 TGCAACCAATGATTTTTCTCGT 57.417 36.364 0.00 0.00 0.00 4.18
2879 3313 4.327898 CCATGCAACCAATGATTTTTCTCG 59.672 41.667 0.00 0.00 0.00 4.04
2880 3314 5.121142 CACCATGCAACCAATGATTTTTCTC 59.879 40.000 0.00 0.00 0.00 2.87
2881 3315 4.998672 CACCATGCAACCAATGATTTTTCT 59.001 37.500 0.00 0.00 0.00 2.52
2882 3316 4.378666 GCACCATGCAACCAATGATTTTTC 60.379 41.667 0.00 0.00 44.26 2.29
2883 3317 3.502979 GCACCATGCAACCAATGATTTTT 59.497 39.130 0.00 0.00 44.26 1.94
2884 3318 3.075884 GCACCATGCAACCAATGATTTT 58.924 40.909 0.00 0.00 44.26 1.82
2885 3319 2.702261 GCACCATGCAACCAATGATTT 58.298 42.857 0.00 0.00 44.26 2.17
2886 3320 2.389962 GCACCATGCAACCAATGATT 57.610 45.000 0.00 0.00 44.26 2.57
2897 3331 2.880890 CTCCACTAATTAGGCACCATGC 59.119 50.000 16.73 0.00 44.08 4.06
2898 3332 4.156455 ACTCCACTAATTAGGCACCATG 57.844 45.455 16.73 4.72 0.00 3.66
2899 3333 6.299141 CAATACTCCACTAATTAGGCACCAT 58.701 40.000 16.73 0.63 0.00 3.55
2900 3334 5.680619 CAATACTCCACTAATTAGGCACCA 58.319 41.667 16.73 0.00 0.00 4.17
2901 3335 4.515567 GCAATACTCCACTAATTAGGCACC 59.484 45.833 16.73 0.00 0.00 5.01
2902 3336 5.123227 TGCAATACTCCACTAATTAGGCAC 58.877 41.667 16.73 0.00 0.00 5.01
2903 3337 5.366482 TGCAATACTCCACTAATTAGGCA 57.634 39.130 16.73 9.73 0.00 4.75
2904 3338 5.335191 GCATGCAATACTCCACTAATTAGGC 60.335 44.000 14.21 7.39 0.00 3.93
2905 3339 6.000219 AGCATGCAATACTCCACTAATTAGG 59.000 40.000 21.98 5.82 0.00 2.69
2906 3340 7.502120 AAGCATGCAATACTCCACTAATTAG 57.498 36.000 21.98 11.05 0.00 1.73
2907 3341 7.880160 AAAGCATGCAATACTCCACTAATTA 57.120 32.000 21.98 0.00 0.00 1.40
2908 3342 6.780457 AAAGCATGCAATACTCCACTAATT 57.220 33.333 21.98 0.00 0.00 1.40
2909 3343 6.780457 AAAAGCATGCAATACTCCACTAAT 57.220 33.333 21.98 0.00 0.00 1.73
2910 3344 6.588719 AAAAAGCATGCAATACTCCACTAA 57.411 33.333 21.98 0.00 0.00 2.24
2931 3365 6.150307 TGCAATACTCCGATTCAAGCTAAAAA 59.850 34.615 0.00 0.00 0.00 1.94
2932 3366 5.645929 TGCAATACTCCGATTCAAGCTAAAA 59.354 36.000 0.00 0.00 0.00 1.52
2933 3367 5.182487 TGCAATACTCCGATTCAAGCTAAA 58.818 37.500 0.00 0.00 0.00 1.85
2934 3368 4.765273 TGCAATACTCCGATTCAAGCTAA 58.235 39.130 0.00 0.00 0.00 3.09
2935 3369 4.400529 TGCAATACTCCGATTCAAGCTA 57.599 40.909 0.00 0.00 0.00 3.32
2936 3370 3.266510 TGCAATACTCCGATTCAAGCT 57.733 42.857 0.00 0.00 0.00 3.74
2937 3371 3.561310 TCATGCAATACTCCGATTCAAGC 59.439 43.478 0.00 0.00 0.00 4.01
2938 3372 5.686834 CATCATGCAATACTCCGATTCAAG 58.313 41.667 0.00 0.00 0.00 3.02
2939 3373 4.023792 GCATCATGCAATACTCCGATTCAA 60.024 41.667 4.20 0.00 44.26 2.69
2940 3374 3.499537 GCATCATGCAATACTCCGATTCA 59.500 43.478 4.20 0.00 44.26 2.57
2941 3375 4.075763 GCATCATGCAATACTCCGATTC 57.924 45.455 4.20 0.00 44.26 2.52
2954 3388 0.828762 TTAGGCCCCATGCATCATGC 60.829 55.000 1.35 1.35 45.29 4.06
2955 3389 1.933021 ATTAGGCCCCATGCATCATG 58.067 50.000 0.00 0.06 43.89 3.07
2956 3390 2.708037 AATTAGGCCCCATGCATCAT 57.292 45.000 0.00 0.00 43.89 2.45
2957 3391 3.609256 TTAATTAGGCCCCATGCATCA 57.391 42.857 0.00 0.00 43.89 3.07
2958 3392 3.259123 CCTTTAATTAGGCCCCATGCATC 59.741 47.826 0.00 0.00 43.89 3.91
2959 3393 3.116784 TCCTTTAATTAGGCCCCATGCAT 60.117 43.478 0.00 0.00 43.89 3.96
2960 3394 2.246067 TCCTTTAATTAGGCCCCATGCA 59.754 45.455 0.00 0.00 43.89 3.96
2961 3395 2.893489 CTCCTTTAATTAGGCCCCATGC 59.107 50.000 0.00 0.00 35.15 4.06
2962 3396 3.891366 CACTCCTTTAATTAGGCCCCATG 59.109 47.826 0.00 0.00 35.15 3.66
2963 3397 3.691311 GCACTCCTTTAATTAGGCCCCAT 60.691 47.826 0.00 0.00 35.15 4.00
2964 3398 2.357777 GCACTCCTTTAATTAGGCCCCA 60.358 50.000 0.00 0.00 35.15 4.96
2965 3399 2.091830 AGCACTCCTTTAATTAGGCCCC 60.092 50.000 0.00 0.00 35.15 5.80
2966 3400 2.952310 CAGCACTCCTTTAATTAGGCCC 59.048 50.000 0.00 0.00 35.15 5.80
2967 3401 2.359214 GCAGCACTCCTTTAATTAGGCC 59.641 50.000 0.00 0.00 35.15 5.19
2968 3402 3.016736 TGCAGCACTCCTTTAATTAGGC 58.983 45.455 0.00 0.00 35.15 3.93
2969 3403 4.498682 GCATGCAGCACTCCTTTAATTAGG 60.499 45.833 14.21 0.00 44.79 2.69
2970 3404 4.604976 GCATGCAGCACTCCTTTAATTAG 58.395 43.478 14.21 0.00 44.79 1.73
2971 3405 4.637483 GCATGCAGCACTCCTTTAATTA 57.363 40.909 14.21 0.00 44.79 1.40
2972 3406 3.515330 GCATGCAGCACTCCTTTAATT 57.485 42.857 14.21 0.00 44.79 1.40
2984 3418 5.148568 CCACAAAATTAAAAAGCATGCAGC 58.851 37.500 21.98 0.00 46.19 5.25
2985 3419 5.469421 TCCCACAAAATTAAAAAGCATGCAG 59.531 36.000 21.98 0.00 0.00 4.41
2986 3420 5.371526 TCCCACAAAATTAAAAAGCATGCA 58.628 33.333 21.98 0.00 0.00 3.96
2987 3421 5.938438 TCCCACAAAATTAAAAAGCATGC 57.062 34.783 10.51 10.51 0.00 4.06
2988 3422 6.709846 TCCTTCCCACAAAATTAAAAAGCATG 59.290 34.615 0.00 0.00 0.00 4.06
2989 3423 6.836242 TCCTTCCCACAAAATTAAAAAGCAT 58.164 32.000 0.00 0.00 0.00 3.79
2990 3424 6.126911 ACTCCTTCCCACAAAATTAAAAAGCA 60.127 34.615 0.00 0.00 0.00 3.91
2991 3425 6.288294 ACTCCTTCCCACAAAATTAAAAAGC 58.712 36.000 0.00 0.00 0.00 3.51
2992 3426 9.996554 AATACTCCTTCCCACAAAATTAAAAAG 57.003 29.630 0.00 0.00 0.00 2.27
2993 3427 9.771534 CAATACTCCTTCCCACAAAATTAAAAA 57.228 29.630 0.00 0.00 0.00 1.94
2994 3428 7.875554 GCAATACTCCTTCCCACAAAATTAAAA 59.124 33.333 0.00 0.00 0.00 1.52
2995 3429 7.015682 TGCAATACTCCTTCCCACAAAATTAAA 59.984 33.333 0.00 0.00 0.00 1.52
2996 3430 6.495181 TGCAATACTCCTTCCCACAAAATTAA 59.505 34.615 0.00 0.00 0.00 1.40
2997 3431 6.013379 TGCAATACTCCTTCCCACAAAATTA 58.987 36.000 0.00 0.00 0.00 1.40
2998 3432 4.837860 TGCAATACTCCTTCCCACAAAATT 59.162 37.500 0.00 0.00 0.00 1.82
2999 3433 4.415596 TGCAATACTCCTTCCCACAAAAT 58.584 39.130 0.00 0.00 0.00 1.82
3000 3434 3.838565 TGCAATACTCCTTCCCACAAAA 58.161 40.909 0.00 0.00 0.00 2.44
3001 3435 3.517296 TGCAATACTCCTTCCCACAAA 57.483 42.857 0.00 0.00 0.00 2.83
3002 3436 3.355378 CATGCAATACTCCTTCCCACAA 58.645 45.455 0.00 0.00 0.00 3.33
3003 3437 2.945440 GCATGCAATACTCCTTCCCACA 60.945 50.000 14.21 0.00 0.00 4.17
3004 3438 1.678101 GCATGCAATACTCCTTCCCAC 59.322 52.381 14.21 0.00 0.00 4.61
3005 3439 1.565759 AGCATGCAATACTCCTTCCCA 59.434 47.619 21.98 0.00 0.00 4.37
3006 3440 1.952296 CAGCATGCAATACTCCTTCCC 59.048 52.381 21.98 0.00 0.00 3.97
3020 3454 1.004185 GCAAGTATGAGTCGCAGCATG 60.004 52.381 0.00 0.00 40.87 4.06
3021 3455 1.293924 GCAAGTATGAGTCGCAGCAT 58.706 50.000 0.00 0.00 0.00 3.79
3022 3456 0.740868 GGCAAGTATGAGTCGCAGCA 60.741 55.000 0.00 0.00 0.00 4.41
3023 3457 0.740868 TGGCAAGTATGAGTCGCAGC 60.741 55.000 0.00 0.00 0.00 5.25
3024 3458 1.725641 TTGGCAAGTATGAGTCGCAG 58.274 50.000 0.00 0.00 0.00 5.18
3025 3459 1.804151 GTTTGGCAAGTATGAGTCGCA 59.196 47.619 0.00 0.00 0.00 5.10
3026 3460 2.076863 AGTTTGGCAAGTATGAGTCGC 58.923 47.619 0.00 0.00 0.00 5.19
3027 3461 5.856126 TTTAGTTTGGCAAGTATGAGTCG 57.144 39.130 0.00 0.00 0.00 4.18
3028 3462 6.404734 CCCATTTAGTTTGGCAAGTATGAGTC 60.405 42.308 0.00 0.00 32.60 3.36
3029 3463 5.418840 CCCATTTAGTTTGGCAAGTATGAGT 59.581 40.000 0.00 0.00 32.60 3.41
3030 3464 5.652014 TCCCATTTAGTTTGGCAAGTATGAG 59.348 40.000 0.00 0.00 32.60 2.90
3031 3465 5.575157 TCCCATTTAGTTTGGCAAGTATGA 58.425 37.500 0.00 0.00 32.60 2.15
3032 3466 5.913137 TCCCATTTAGTTTGGCAAGTATG 57.087 39.130 0.00 1.71 32.60 2.39
3033 3467 7.494922 AAATCCCATTTAGTTTGGCAAGTAT 57.505 32.000 0.00 0.00 32.60 2.12
3034 3468 6.926630 AAATCCCATTTAGTTTGGCAAGTA 57.073 33.333 0.00 0.00 32.60 2.24
3035 3469 5.823861 AAATCCCATTTAGTTTGGCAAGT 57.176 34.783 0.00 0.00 32.60 3.16
3036 3470 6.072563 CCAAAAATCCCATTTAGTTTGGCAAG 60.073 38.462 0.00 0.00 33.45 4.01
3037 3471 5.767168 CCAAAAATCCCATTTAGTTTGGCAA 59.233 36.000 0.00 0.00 33.45 4.52
3038 3472 5.312079 CCAAAAATCCCATTTAGTTTGGCA 58.688 37.500 0.00 0.00 33.45 4.92
3039 3473 5.878332 CCAAAAATCCCATTTAGTTTGGC 57.122 39.130 0.00 0.00 33.45 4.52
3040 3474 5.412286 CAGCCAAAAATCCCATTTAGTTTGG 59.588 40.000 8.30 8.30 39.18 3.28
3041 3475 5.106594 GCAGCCAAAAATCCCATTTAGTTTG 60.107 40.000 0.00 0.00 0.00 2.93
3042 3476 5.003160 GCAGCCAAAAATCCCATTTAGTTT 58.997 37.500 0.00 0.00 0.00 2.66
3043 3477 4.041444 TGCAGCCAAAAATCCCATTTAGTT 59.959 37.500 0.00 0.00 0.00 2.24
3044 3478 3.582208 TGCAGCCAAAAATCCCATTTAGT 59.418 39.130 0.00 0.00 0.00 2.24
3045 3479 4.205065 TGCAGCCAAAAATCCCATTTAG 57.795 40.909 0.00 0.00 0.00 1.85
3046 3480 4.515361 CATGCAGCCAAAAATCCCATTTA 58.485 39.130 0.00 0.00 0.00 1.40
3047 3481 3.349022 CATGCAGCCAAAAATCCCATTT 58.651 40.909 0.00 0.00 0.00 2.32
3048 3482 2.356330 CCATGCAGCCAAAAATCCCATT 60.356 45.455 0.00 0.00 0.00 3.16
3049 3483 1.210967 CCATGCAGCCAAAAATCCCAT 59.789 47.619 0.00 0.00 0.00 4.00
3050 3484 0.614294 CCATGCAGCCAAAAATCCCA 59.386 50.000 0.00 0.00 0.00 4.37
3051 3485 0.903942 TCCATGCAGCCAAAAATCCC 59.096 50.000 0.00 0.00 0.00 3.85
3052 3486 2.766345 TTCCATGCAGCCAAAAATCC 57.234 45.000 0.00 0.00 0.00 3.01
3053 3487 2.940410 CCATTCCATGCAGCCAAAAATC 59.060 45.455 0.00 0.00 0.00 2.17
3054 3488 2.572556 TCCATTCCATGCAGCCAAAAAT 59.427 40.909 0.00 0.00 0.00 1.82
3055 3489 1.976404 TCCATTCCATGCAGCCAAAAA 59.024 42.857 0.00 0.00 0.00 1.94
3056 3490 1.642112 TCCATTCCATGCAGCCAAAA 58.358 45.000 0.00 0.00 0.00 2.44
3057 3491 1.868713 ATCCATTCCATGCAGCCAAA 58.131 45.000 0.00 0.00 0.00 3.28
3058 3492 2.309613 GTATCCATTCCATGCAGCCAA 58.690 47.619 0.00 0.00 0.00 4.52
3059 3493 1.214923 TGTATCCATTCCATGCAGCCA 59.785 47.619 0.00 0.00 0.00 4.75
3060 3494 1.610522 GTGTATCCATTCCATGCAGCC 59.389 52.381 0.00 0.00 0.00 4.85
3061 3495 2.300433 TGTGTATCCATTCCATGCAGC 58.700 47.619 0.00 0.00 0.00 5.25
3062 3496 4.395625 AGATGTGTATCCATTCCATGCAG 58.604 43.478 0.00 0.00 33.64 4.41
3063 3497 4.141436 TGAGATGTGTATCCATTCCATGCA 60.141 41.667 0.00 0.00 33.64 3.96
3064 3498 4.214971 GTGAGATGTGTATCCATTCCATGC 59.785 45.833 0.00 0.00 33.64 4.06
3065 3499 5.237996 GTGTGAGATGTGTATCCATTCCATG 59.762 44.000 0.00 0.00 33.64 3.66
3066 3500 5.131642 AGTGTGAGATGTGTATCCATTCCAT 59.868 40.000 0.00 0.00 33.64 3.41
3067 3501 4.471025 AGTGTGAGATGTGTATCCATTCCA 59.529 41.667 0.00 0.00 33.64 3.53
3068 3502 4.813161 CAGTGTGAGATGTGTATCCATTCC 59.187 45.833 0.00 0.00 33.64 3.01
3069 3503 4.272018 GCAGTGTGAGATGTGTATCCATTC 59.728 45.833 0.00 0.00 33.64 2.67
3070 3504 4.194640 GCAGTGTGAGATGTGTATCCATT 58.805 43.478 0.00 0.00 33.64 3.16
3071 3505 3.198417 TGCAGTGTGAGATGTGTATCCAT 59.802 43.478 0.00 0.00 33.64 3.41
3072 3506 2.566724 TGCAGTGTGAGATGTGTATCCA 59.433 45.455 0.00 0.00 33.64 3.41
3073 3507 3.251479 TGCAGTGTGAGATGTGTATCC 57.749 47.619 0.00 0.00 33.64 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.