Multiple sequence alignment - TraesCS5A01G079000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G079000 chr5A 100.000 5633 0 0 1 5633 98033184 98038816 0.000000e+00 10403.0
1 TraesCS5A01G079000 chr5A 81.887 265 39 4 5378 5633 695246463 695246199 1.230000e-51 215.0
2 TraesCS5A01G079000 chr5A 93.939 132 8 0 3187 3318 98036300 98036431 3.440000e-47 200.0
3 TraesCS5A01G079000 chr5A 93.939 132 8 0 3117 3248 98036370 98036501 3.440000e-47 200.0
4 TraesCS5A01G079000 chr5B 93.062 5275 243 50 1 5198 111204314 111199086 0.000000e+00 7600.0
5 TraesCS5A01G079000 chr5B 95.455 132 6 0 3117 3248 111201100 111200969 1.590000e-50 211.0
6 TraesCS5A01G079000 chr5B 93.939 66 4 0 3117 3182 111201030 111200965 3.590000e-17 100.0
7 TraesCS5A01G079000 chr5D 96.739 4263 108 12 1 4245 102035974 102031725 0.000000e+00 7073.0
8 TraesCS5A01G079000 chr5D 92.743 937 34 14 4295 5211 102031165 102030243 0.000000e+00 1323.0
9 TraesCS5A01G079000 chr5D 86.207 261 27 5 5382 5633 57845977 57846237 2.000000e-69 274.0
10 TraesCS5A01G079000 chr4B 79.237 891 130 34 1794 2649 18424025 18424895 2.280000e-158 569.0
11 TraesCS5A01G079000 chr4B 79.614 726 106 25 1794 2491 38615636 38616347 3.050000e-132 483.0
12 TraesCS5A01G079000 chr4B 93.333 240 16 0 3946 4185 237949692 237949931 6.940000e-94 355.0
13 TraesCS5A01G079000 chr4B 92.174 230 18 0 3956 4185 618251809 618251580 5.440000e-85 326.0
14 TraesCS5A01G079000 chr4B 87.500 264 23 6 5379 5633 633785250 633785512 4.270000e-76 296.0
15 TraesCS5A01G079000 chr4B 90.244 41 4 0 3446 3486 18425374 18425414 3.000000e-03 54.7
16 TraesCS5A01G079000 chr4B 96.875 32 1 0 1067 1098 38614999 38615030 3.000000e-03 54.7
17 TraesCS5A01G079000 chr4A 80.324 803 111 29 1793 2565 593764485 593763700 1.060000e-156 564.0
18 TraesCS5A01G079000 chr4A 87.692 260 23 5 5382 5632 96276659 96276400 1.530000e-75 294.0
19 TraesCS5A01G079000 chr4A 81.437 167 25 3 3618 3784 593762898 593762738 1.270000e-26 132.0
20 TraesCS5A01G079000 chr4A 100.000 29 0 0 1070 1098 593765164 593765136 3.000000e-03 54.7
21 TraesCS5A01G079000 chr4D 78.328 909 129 41 1794 2662 9563150 9564030 5.000000e-145 525.0
22 TraesCS5A01G079000 chr4D 81.395 172 26 3 3618 3789 9564770 9564935 9.840000e-28 135.0
23 TraesCS5A01G079000 chr4D 81.481 81 11 3 3446 3524 9564590 9564668 4.710000e-06 63.9
24 TraesCS5A01G079000 chr4D 96.875 32 1 0 1067 1098 9562468 9562499 3.000000e-03 54.7
25 TraesCS5A01G079000 chr2B 90.361 249 20 4 3942 4190 755063016 755063260 1.960000e-84 324.0
26 TraesCS5A01G079000 chr2B 89.960 249 22 3 3942 4190 755034740 755034495 9.110000e-83 318.0
27 TraesCS5A01G079000 chr2B 87.805 246 27 2 3943 4185 58720024 58720269 9.240000e-73 285.0
28 TraesCS5A01G079000 chr2B 96.154 78 3 0 5305 5382 777295374 777295451 1.650000e-25 128.0
29 TraesCS5A01G079000 chr1D 90.871 241 21 1 3945 4185 452489599 452489838 7.040000e-84 322.0
30 TraesCS5A01G079000 chr1D 86.590 261 26 5 5382 5633 1531991 1531731 4.300000e-71 279.0
31 TraesCS5A01G079000 chr3D 86.891 267 25 6 5376 5633 492119888 492119623 1.990000e-74 291.0
32 TraesCS5A01G079000 chr3D 86.207 261 26 8 5382 5633 482488157 482487898 2.000000e-69 274.0
33 TraesCS5A01G079000 chr6D 87.302 252 27 5 3936 4186 470928158 470928405 3.320000e-72 283.0
34 TraesCS5A01G079000 chr3A 86.692 263 25 7 5380 5632 448310881 448311143 3.320000e-72 283.0
35 TraesCS5A01G079000 chr1A 86.038 265 27 8 5377 5632 279824475 279824738 5.560000e-70 276.0
36 TraesCS5A01G079000 chr6B 86.207 261 27 6 5382 5633 658806772 658806512 2.000000e-69 274.0
37 TraesCS5A01G079000 chr6A 85.000 260 30 6 5382 5632 484569339 484569080 7.240000e-64 255.0
38 TraesCS5A01G079000 chr7A 97.500 80 2 0 5303 5382 117355615 117355694 2.740000e-28 137.0
39 TraesCS5A01G079000 chr2A 97.297 74 2 0 5309 5382 755792029 755792102 5.920000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G079000 chr5A 98033184 98038816 5632 False 3601.000000 10403 95.959333 1 5633 3 chr5A.!!$F1 5632
1 TraesCS5A01G079000 chr5B 111199086 111204314 5228 True 2637.000000 7600 94.152000 1 5198 3 chr5B.!!$R1 5197
2 TraesCS5A01G079000 chr5D 102030243 102035974 5731 True 4198.000000 7073 94.741000 1 5211 2 chr5D.!!$R1 5210
3 TraesCS5A01G079000 chr4B 18424025 18425414 1389 False 311.850000 569 84.740500 1794 3486 2 chr4B.!!$F3 1692
4 TraesCS5A01G079000 chr4B 38614999 38616347 1348 False 268.850000 483 88.244500 1067 2491 2 chr4B.!!$F4 1424
5 TraesCS5A01G079000 chr4A 593762738 593765164 2426 True 250.233333 564 87.253667 1070 3784 3 chr4A.!!$R2 2714

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
427 434 0.403655 TGGCATGCTACCCTTGTGAA 59.596 50.000 18.92 0.00 0.00 3.18 F
590 602 1.005662 CGCTGTCGCATATGTGAACTG 60.006 52.381 20.15 16.95 36.19 3.16 F
1523 1555 1.786937 ACCAAGTTTGAACCCATGCA 58.213 45.000 0.00 0.00 0.00 3.96 F
2242 2321 1.864862 CTTCGCCAAGAGTGCACAG 59.135 57.895 21.04 5.63 0.00 3.66 F
3473 3641 2.355363 CGTTCCCGTTCACGCTCA 60.355 61.111 0.00 0.00 38.18 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1337 1358 3.160047 ATCCTCCGCTCTGCCAGG 61.160 66.667 0.0 0.0 0.00 4.45 R
2357 2442 6.645306 TCCCTGTACATGTCGATTTCATTAA 58.355 36.000 0.0 0.0 0.00 1.40 R
2835 2967 2.128771 TGCTGCAAGAGGGGAATTAC 57.871 50.000 0.0 0.0 34.07 1.89 R
4143 4363 1.979809 TAGGCCCCCTCTCATTTTGA 58.020 50.000 0.0 0.0 34.61 2.69 R
5370 6121 0.043334 ATAGGCCCTCAGTGGACAGT 59.957 55.000 0.0 0.0 35.02 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 4.838152 CCCACCGGCATCGACCTG 62.838 72.222 0.00 0.00 39.00 4.00
139 144 2.285180 CCTCCCTCCCTCTCCCTG 59.715 72.222 0.00 0.00 0.00 4.45
150 155 4.748798 CTCCCTGCACCCCCTCCT 62.749 72.222 0.00 0.00 0.00 3.69
348 353 2.106566 GCTTCCTCTGACCTGAGATGA 58.893 52.381 5.62 0.00 36.23 2.92
366 371 1.069513 TGACCGTCGAAATCTGGTGTT 59.930 47.619 0.00 0.00 34.12 3.32
367 372 2.140717 GACCGTCGAAATCTGGTGTTT 58.859 47.619 0.00 0.00 34.12 2.83
368 373 1.871039 ACCGTCGAAATCTGGTGTTTG 59.129 47.619 0.00 0.00 32.33 2.93
427 434 0.403655 TGGCATGCTACCCTTGTGAA 59.596 50.000 18.92 0.00 0.00 3.18
525 536 4.736126 TGTGTCGAGAATGGTGATATGT 57.264 40.909 0.00 0.00 0.00 2.29
561 573 6.839124 ATTGCATCTCCTATGTTTGTTGAA 57.161 33.333 0.00 0.00 0.00 2.69
564 576 7.936496 TGCATCTCCTATGTTTGTTGAATAA 57.064 32.000 0.00 0.00 0.00 1.40
590 602 1.005662 CGCTGTCGCATATGTGAACTG 60.006 52.381 20.15 16.95 36.19 3.16
598 613 3.081061 GCATATGTGAACTGTTGGTGGA 58.919 45.455 4.29 0.00 0.00 4.02
668 683 4.118168 AGGTGGATTCAGTGTTGGATTT 57.882 40.909 0.00 0.00 0.00 2.17
683 698 8.468399 AGTGTTGGATTTTGCAAATTTTGATTT 58.532 25.926 13.65 0.00 26.96 2.17
1050 1066 4.977810 CCGAGGAGGGGATATGGT 57.022 61.111 0.00 0.00 35.97 3.55
1264 1280 2.291209 TGACATGGATGCCACTTGTT 57.709 45.000 0.00 0.00 35.80 2.83
1337 1358 5.927954 TGTTTAACGTGGTTATCTCAACC 57.072 39.130 0.00 0.00 40.67 3.77
1523 1555 1.786937 ACCAAGTTTGAACCCATGCA 58.213 45.000 0.00 0.00 0.00 3.96
1524 1556 2.114616 ACCAAGTTTGAACCCATGCAA 58.885 42.857 0.00 0.00 0.00 4.08
1658 1709 4.148838 ACCACCTTTGTGCATTTAAGCTA 58.851 39.130 0.00 0.00 41.35 3.32
1674 1725 9.722056 CATTTAAGCTACATGAAAATGGTCTAC 57.278 33.333 0.00 0.00 35.10 2.59
1776 1829 5.817816 GTGTACTTTCTCCTACCCATTCATG 59.182 44.000 0.00 0.00 0.00 3.07
2242 2321 1.864862 CTTCGCCAAGAGTGCACAG 59.135 57.895 21.04 5.63 0.00 3.66
2357 2442 4.584743 CCTTTTTCTCTGCCCTACTTTGTT 59.415 41.667 0.00 0.00 0.00 2.83
2835 2967 6.713762 TTTTTATCCAATGCTCACTATGGG 57.286 37.500 0.00 0.00 33.66 4.00
2893 3025 5.282055 TCCTGTTGTAGCTGATATTGGAG 57.718 43.478 0.00 0.00 0.00 3.86
2950 3100 3.806625 AACCAATGAACATAGCATGGC 57.193 42.857 0.00 0.00 33.60 4.40
2968 3118 2.948979 TGGCATTCCTTACCTATTTGCG 59.051 45.455 0.00 0.00 0.00 4.85
3073 3239 7.491696 GCGGAGTCCCTATATGATAATTAACAC 59.508 40.741 2.80 0.00 0.00 3.32
3218 3386 6.712095 TGCTGTTAATGTCTGAAGTGAAGATT 59.288 34.615 0.00 0.00 0.00 2.40
3288 3456 7.389053 GTCCTGTTAATGTCTGAAGTGAAGATT 59.611 37.037 0.00 0.00 0.00 2.40
3309 3477 4.556942 TGTATAAGACCCATCACGTACG 57.443 45.455 15.01 15.01 0.00 3.67
3358 3526 4.048504 GGTGTGAAACCTGTAATTGTTGC 58.951 43.478 0.00 0.00 46.55 4.17
3374 3542 3.049206 TGTTGCGAACTTTTTATGCTGC 58.951 40.909 0.00 0.00 0.00 5.25
3473 3641 2.355363 CGTTCCCGTTCACGCTCA 60.355 61.111 0.00 0.00 38.18 4.26
3790 4007 3.623060 GTGACCAACGTGATGCTGATAAT 59.377 43.478 0.00 0.00 0.00 1.28
3958 4178 5.420725 TTGCCATTGTACTACATCTGTCT 57.579 39.130 0.00 0.00 0.00 3.41
4006 4226 3.068024 TGAGCCAAACTTTGACCATTCAC 59.932 43.478 2.87 0.00 0.00 3.18
4193 4413 6.666546 CCCGGATGGAGGTAGTAAATCTTATA 59.333 42.308 0.73 0.00 37.49 0.98
4248 4468 3.501950 CTGGCATCGAAAGTTTTAAGCC 58.498 45.455 12.58 12.58 41.15 4.35
4274 4494 4.597079 TCTTTCTAGCGCTGTTGTTTTTG 58.403 39.130 22.90 1.28 0.00 2.44
4278 4498 0.998669 AGCGCTGTTGTTTTTGCAAC 59.001 45.000 10.39 2.38 46.36 4.17
4320 5050 8.464179 ACATGCTCGTTATGTGTACTGGAAGT 62.464 42.308 0.00 0.00 43.24 3.01
4363 5093 5.920273 TGAAGAAAATCAAGAAACGAATGGC 59.080 36.000 0.00 0.00 0.00 4.40
4387 5117 3.623453 GCAGTTCTTAGGGCATTCCTTCT 60.623 47.826 0.00 0.00 45.47 2.85
4388 5118 4.195416 CAGTTCTTAGGGCATTCCTTCTC 58.805 47.826 0.00 0.00 45.47 2.87
4389 5119 3.201045 AGTTCTTAGGGCATTCCTTCTCC 59.799 47.826 0.00 0.00 45.47 3.71
4551 5283 3.407967 GGATCCCCTTCACGCCCA 61.408 66.667 0.00 0.00 0.00 5.36
4647 5379 5.003804 AGCGACTGAGAAATTGGTTACATT 58.996 37.500 0.00 0.00 0.00 2.71
4683 5415 3.366883 GCATCTCCATCTAGCTACTTCCG 60.367 52.174 0.00 0.00 0.00 4.30
4684 5416 2.231529 TCTCCATCTAGCTACTTCCGC 58.768 52.381 0.00 0.00 0.00 5.54
4685 5417 2.158593 TCTCCATCTAGCTACTTCCGCT 60.159 50.000 0.00 0.00 41.35 5.52
4686 5418 2.227865 CTCCATCTAGCTACTTCCGCTC 59.772 54.545 0.00 0.00 38.86 5.03
4687 5419 1.271102 CCATCTAGCTACTTCCGCTCC 59.729 57.143 0.00 0.00 38.86 4.70
4706 5438 4.324267 CTCCATTGGTTCGAGTAAAACCT 58.676 43.478 1.86 0.00 45.31 3.50
4772 5504 0.314935 CCCGCTTGTTGCTGTTGAAT 59.685 50.000 0.00 0.00 40.11 2.57
4798 5530 1.079197 CCTGTAGCATGGCGTGTCA 60.079 57.895 8.75 5.10 0.00 3.58
4826 5558 5.894298 ATCTATGTACCATGTGTGTGGAT 57.106 39.130 0.00 0.00 42.02 3.41
4884 5616 4.843220 AAAAGCTTGTGAGTTGATCCAG 57.157 40.909 0.00 0.00 0.00 3.86
4998 5737 4.828409 CACCAGGTGCCATCACTT 57.172 55.556 6.67 0.00 42.72 3.16
5000 5739 2.198827 CACCAGGTGCCATCACTTTA 57.801 50.000 6.67 0.00 42.72 1.85
5001 5740 1.812571 CACCAGGTGCCATCACTTTAC 59.187 52.381 6.67 0.00 42.72 2.01
5010 5749 5.122396 GGTGCCATCACTTTACTTACTCTTG 59.878 44.000 0.00 0.00 42.72 3.02
5031 5776 0.749454 GGTGGTGATGCTAGGCAAGG 60.749 60.000 0.00 0.00 43.62 3.61
5075 5820 0.758123 TGCATGCGACCTATGGATCA 59.242 50.000 14.09 0.00 0.00 2.92
5088 5833 2.100631 GGATCACTTCGGGTGTGCG 61.101 63.158 0.00 0.00 45.50 5.34
5116 5862 4.321974 CCTTTGTGGTTCCCAGCTTTTATC 60.322 45.833 0.00 0.00 32.34 1.75
5129 5875 4.761739 CAGCTTTTATCTGGGACTTTGACA 59.238 41.667 0.00 0.00 0.00 3.58
5133 5879 6.399639 TTTTATCTGGGACTTTGACAAACC 57.600 37.500 0.00 0.00 0.00 3.27
5137 5883 4.090090 TCTGGGACTTTGACAAACCAAAA 58.910 39.130 9.34 0.57 35.83 2.44
5154 5901 2.510664 AAAAACTTTCGGCTGGGCA 58.489 47.368 0.00 0.00 0.00 5.36
5156 5903 0.755327 AAAACTTTCGGCTGGGCAGT 60.755 50.000 0.00 0.00 0.00 4.40
5158 5905 0.755327 AACTTTCGGCTGGGCAGTTT 60.755 50.000 0.00 0.00 0.00 2.66
5159 5906 1.286880 CTTTCGGCTGGGCAGTTTG 59.713 57.895 0.00 0.00 0.00 2.93
5160 5907 1.152860 TTTCGGCTGGGCAGTTTGA 60.153 52.632 0.00 0.00 0.00 2.69
5168 5915 2.883888 GCTGGGCAGTTTGAGGGAAATA 60.884 50.000 0.00 0.00 0.00 1.40
5185 5932 4.511826 GGAAATAGTGACCATCAATCCGTC 59.488 45.833 0.00 0.00 0.00 4.79
5187 5934 1.182667 AGTGACCATCAATCCGTCGA 58.817 50.000 0.00 0.00 0.00 4.20
5205 5956 2.705127 TCGACCCATCCATCATGAATGA 59.295 45.455 0.00 0.00 41.70 2.57
5216 5967 3.851458 TCATGAATGATGTAGCAGCCT 57.149 42.857 0.00 0.00 33.29 4.58
5217 5968 4.961438 TCATGAATGATGTAGCAGCCTA 57.039 40.909 0.00 0.00 33.29 3.93
5218 5969 4.635223 TCATGAATGATGTAGCAGCCTAC 58.365 43.478 0.00 0.00 43.43 3.18
5226 5977 2.301577 GTAGCAGCCTACAAGACTGG 57.698 55.000 0.00 0.00 42.81 4.00
5227 5978 1.825474 GTAGCAGCCTACAAGACTGGA 59.175 52.381 0.00 0.00 42.81 3.86
5228 5979 1.352083 AGCAGCCTACAAGACTGGAA 58.648 50.000 0.00 0.00 31.94 3.53
5229 5980 1.002544 AGCAGCCTACAAGACTGGAAC 59.997 52.381 0.00 0.00 31.94 3.62
5230 5981 1.946283 GCAGCCTACAAGACTGGAACC 60.946 57.143 0.00 0.00 31.94 3.62
5231 5982 1.625818 CAGCCTACAAGACTGGAACCT 59.374 52.381 0.00 0.00 0.00 3.50
5232 5983 1.903183 AGCCTACAAGACTGGAACCTC 59.097 52.381 0.00 0.00 0.00 3.85
5233 5984 1.066071 GCCTACAAGACTGGAACCTCC 60.066 57.143 0.00 0.00 36.96 4.30
5234 5985 1.555533 CCTACAAGACTGGAACCTCCC 59.444 57.143 0.00 0.00 35.03 4.30
5235 5986 2.541466 CTACAAGACTGGAACCTCCCT 58.459 52.381 0.00 0.00 35.03 4.20
5236 5987 2.715763 ACAAGACTGGAACCTCCCTA 57.284 50.000 0.00 0.00 35.03 3.53
5237 5988 3.207044 ACAAGACTGGAACCTCCCTAT 57.793 47.619 0.00 0.00 35.03 2.57
5238 5989 3.532102 ACAAGACTGGAACCTCCCTATT 58.468 45.455 0.00 0.00 35.03 1.73
5239 5990 4.695606 ACAAGACTGGAACCTCCCTATTA 58.304 43.478 0.00 0.00 35.03 0.98
5240 5991 4.470304 ACAAGACTGGAACCTCCCTATTAC 59.530 45.833 0.00 0.00 35.03 1.89
5241 5992 3.297736 AGACTGGAACCTCCCTATTACG 58.702 50.000 0.00 0.00 35.03 3.18
5242 5993 3.029570 GACTGGAACCTCCCTATTACGT 58.970 50.000 0.00 0.00 35.03 3.57
5243 5994 4.079558 AGACTGGAACCTCCCTATTACGTA 60.080 45.833 0.00 0.00 35.03 3.57
5244 5995 4.213513 ACTGGAACCTCCCTATTACGTAG 58.786 47.826 0.00 0.00 35.03 3.51
5256 6007 6.399204 CCTATTACGTAGGTGTTGTGTTTC 57.601 41.667 0.00 0.00 44.30 2.78
5257 6008 5.927689 CCTATTACGTAGGTGTTGTGTTTCA 59.072 40.000 0.00 0.00 44.30 2.69
5258 6009 5.662211 ATTACGTAGGTGTTGTGTTTCAC 57.338 39.130 0.00 0.00 34.56 3.18
5259 6010 1.928503 ACGTAGGTGTTGTGTTTCACG 59.071 47.619 0.00 0.00 37.14 4.35
5260 6011 1.928503 CGTAGGTGTTGTGTTTCACGT 59.071 47.619 0.00 0.00 37.14 4.49
5261 6012 2.349275 CGTAGGTGTTGTGTTTCACGTT 59.651 45.455 0.00 0.00 37.14 3.99
5262 6013 3.181518 CGTAGGTGTTGTGTTTCACGTTT 60.182 43.478 0.00 0.00 37.14 3.60
5263 6014 3.210358 AGGTGTTGTGTTTCACGTTTG 57.790 42.857 0.00 0.00 37.14 2.93
5264 6015 2.554893 AGGTGTTGTGTTTCACGTTTGT 59.445 40.909 0.00 0.00 37.14 2.83
5265 6016 3.752222 AGGTGTTGTGTTTCACGTTTGTA 59.248 39.130 0.00 0.00 37.14 2.41
5266 6017 4.092816 GGTGTTGTGTTTCACGTTTGTAG 58.907 43.478 0.00 0.00 37.14 2.74
5267 6018 4.378666 GGTGTTGTGTTTCACGTTTGTAGT 60.379 41.667 0.00 0.00 37.14 2.73
5268 6019 5.163874 GGTGTTGTGTTTCACGTTTGTAGTA 60.164 40.000 0.00 0.00 37.14 1.82
5269 6020 5.729424 GTGTTGTGTTTCACGTTTGTAGTAC 59.271 40.000 0.00 0.00 37.14 2.73
5270 6021 5.407691 TGTTGTGTTTCACGTTTGTAGTACA 59.592 36.000 0.00 0.00 37.14 2.90
5271 6022 6.092396 TGTTGTGTTTCACGTTTGTAGTACAT 59.908 34.615 3.28 0.00 37.14 2.29
5272 6023 6.038601 TGTGTTTCACGTTTGTAGTACATG 57.961 37.500 3.28 0.00 37.14 3.21
5273 6024 5.811100 TGTGTTTCACGTTTGTAGTACATGA 59.189 36.000 3.28 1.99 37.14 3.07
5274 6025 6.480651 TGTGTTTCACGTTTGTAGTACATGAT 59.519 34.615 3.28 0.00 37.14 2.45
5275 6026 7.652507 TGTGTTTCACGTTTGTAGTACATGATA 59.347 33.333 3.28 0.00 37.14 2.15
5276 6027 8.653338 GTGTTTCACGTTTGTAGTACATGATAT 58.347 33.333 3.28 0.00 0.00 1.63
5277 6028 8.652463 TGTTTCACGTTTGTAGTACATGATATG 58.348 33.333 3.28 0.41 0.00 1.78
5278 6029 6.822073 TCACGTTTGTAGTACATGATATGC 57.178 37.500 3.28 0.00 0.00 3.14
5279 6030 5.457473 TCACGTTTGTAGTACATGATATGCG 59.543 40.000 3.28 4.42 0.00 4.73
5280 6031 5.231357 CACGTTTGTAGTACATGATATGCGT 59.769 40.000 3.28 4.97 0.00 5.24
5281 6032 6.415573 CACGTTTGTAGTACATGATATGCGTA 59.584 38.462 3.28 0.00 0.00 4.42
5282 6033 6.635641 ACGTTTGTAGTACATGATATGCGTAG 59.364 38.462 3.28 0.00 0.00 3.51
5296 6047 2.449548 CGTAGCTGACTTGCAGTGG 58.550 57.895 0.00 0.00 46.62 4.00
5297 6048 0.038251 CGTAGCTGACTTGCAGTGGA 60.038 55.000 0.00 0.00 46.62 4.02
5298 6049 1.605457 CGTAGCTGACTTGCAGTGGAA 60.605 52.381 0.00 0.00 46.62 3.53
5299 6050 2.494059 GTAGCTGACTTGCAGTGGAAA 58.506 47.619 0.00 0.00 46.62 3.13
5300 6051 2.057137 AGCTGACTTGCAGTGGAAAA 57.943 45.000 0.00 0.00 46.62 2.29
5301 6052 1.678101 AGCTGACTTGCAGTGGAAAAC 59.322 47.619 0.00 0.00 46.62 2.43
5302 6053 1.678101 GCTGACTTGCAGTGGAAAACT 59.322 47.619 0.00 0.00 46.62 2.66
5303 6054 2.287248 GCTGACTTGCAGTGGAAAACTC 60.287 50.000 0.00 0.00 46.62 3.01
5304 6055 3.209410 CTGACTTGCAGTGGAAAACTCT 58.791 45.455 0.00 0.00 39.85 3.24
5305 6056 4.380531 CTGACTTGCAGTGGAAAACTCTA 58.619 43.478 0.00 0.00 39.85 2.43
5306 6057 4.127171 TGACTTGCAGTGGAAAACTCTAC 58.873 43.478 0.00 0.00 36.83 2.59
5307 6058 3.131396 ACTTGCAGTGGAAAACTCTACG 58.869 45.455 0.00 0.00 36.83 3.51
5308 6059 2.163818 TGCAGTGGAAAACTCTACGG 57.836 50.000 0.00 0.00 36.83 4.02
5309 6060 1.270625 TGCAGTGGAAAACTCTACGGG 60.271 52.381 0.00 0.00 36.83 5.28
5310 6061 1.439679 CAGTGGAAAACTCTACGGGC 58.560 55.000 0.00 0.00 36.83 6.13
5311 6062 1.002087 CAGTGGAAAACTCTACGGGCT 59.998 52.381 0.00 0.00 36.83 5.19
5312 6063 1.275573 AGTGGAAAACTCTACGGGCTC 59.724 52.381 0.00 0.00 31.64 4.70
5313 6064 0.611714 TGGAAAACTCTACGGGCTCC 59.388 55.000 0.00 0.00 0.00 4.70
5314 6065 0.903236 GGAAAACTCTACGGGCTCCT 59.097 55.000 0.00 0.00 0.00 3.69
5315 6066 1.278413 GGAAAACTCTACGGGCTCCTT 59.722 52.381 0.00 0.00 0.00 3.36
5316 6067 2.290134 GGAAAACTCTACGGGCTCCTTT 60.290 50.000 0.00 0.00 0.00 3.11
5317 6068 2.474410 AAACTCTACGGGCTCCTTTG 57.526 50.000 0.00 0.00 0.00 2.77
5318 6069 1.640917 AACTCTACGGGCTCCTTTGA 58.359 50.000 0.00 0.00 0.00 2.69
5319 6070 1.867363 ACTCTACGGGCTCCTTTGAT 58.133 50.000 0.00 0.00 0.00 2.57
5320 6071 2.188817 ACTCTACGGGCTCCTTTGATT 58.811 47.619 0.00 0.00 0.00 2.57
5321 6072 2.168728 ACTCTACGGGCTCCTTTGATTC 59.831 50.000 0.00 0.00 0.00 2.52
5322 6073 2.168521 CTCTACGGGCTCCTTTGATTCA 59.831 50.000 0.00 0.00 0.00 2.57
5323 6074 2.093658 TCTACGGGCTCCTTTGATTCAC 60.094 50.000 0.00 0.00 0.00 3.18
5324 6075 0.400213 ACGGGCTCCTTTGATTCACA 59.600 50.000 0.00 0.00 0.00 3.58
5325 6076 1.089920 CGGGCTCCTTTGATTCACAG 58.910 55.000 0.00 0.00 0.00 3.66
5326 6077 1.467920 GGGCTCCTTTGATTCACAGG 58.532 55.000 11.93 11.93 33.03 4.00
5327 6078 1.467920 GGCTCCTTTGATTCACAGGG 58.532 55.000 16.89 9.95 32.66 4.45
5328 6079 1.272147 GGCTCCTTTGATTCACAGGGT 60.272 52.381 16.89 0.00 32.66 4.34
5329 6080 2.519013 GCTCCTTTGATTCACAGGGTT 58.481 47.619 16.89 0.00 32.66 4.11
5330 6081 2.893489 GCTCCTTTGATTCACAGGGTTT 59.107 45.455 16.89 0.00 32.66 3.27
5331 6082 4.079253 GCTCCTTTGATTCACAGGGTTTA 58.921 43.478 16.89 0.00 32.66 2.01
5332 6083 4.156739 GCTCCTTTGATTCACAGGGTTTAG 59.843 45.833 16.89 9.23 32.66 1.85
5333 6084 5.560724 CTCCTTTGATTCACAGGGTTTAGA 58.439 41.667 16.89 0.00 32.66 2.10
5334 6085 5.947663 TCCTTTGATTCACAGGGTTTAGAA 58.052 37.500 16.89 0.00 32.66 2.10
5335 6086 6.369629 TCCTTTGATTCACAGGGTTTAGAAA 58.630 36.000 16.89 0.00 32.66 2.52
5336 6087 6.490040 TCCTTTGATTCACAGGGTTTAGAAAG 59.510 38.462 16.89 0.32 32.66 2.62
5337 6088 5.705609 TTGATTCACAGGGTTTAGAAAGC 57.294 39.130 0.00 0.00 35.75 3.51
5338 6089 3.751175 TGATTCACAGGGTTTAGAAAGCG 59.249 43.478 0.00 0.00 37.28 4.68
5339 6090 2.922740 TCACAGGGTTTAGAAAGCGT 57.077 45.000 0.00 0.00 37.28 5.07
5340 6091 4.339872 TTCACAGGGTTTAGAAAGCGTA 57.660 40.909 0.00 0.00 37.28 4.42
5341 6092 3.921677 TCACAGGGTTTAGAAAGCGTAG 58.078 45.455 0.00 0.00 37.28 3.51
5342 6093 3.000727 CACAGGGTTTAGAAAGCGTAGG 58.999 50.000 0.00 0.00 37.28 3.18
5343 6094 2.901839 ACAGGGTTTAGAAAGCGTAGGA 59.098 45.455 0.00 0.00 37.28 2.94
5344 6095 3.325716 ACAGGGTTTAGAAAGCGTAGGAA 59.674 43.478 0.00 0.00 37.28 3.36
5345 6096 4.019591 ACAGGGTTTAGAAAGCGTAGGAAT 60.020 41.667 0.00 0.00 37.28 3.01
5346 6097 5.188359 ACAGGGTTTAGAAAGCGTAGGAATA 59.812 40.000 0.00 0.00 37.28 1.75
5347 6098 5.753921 CAGGGTTTAGAAAGCGTAGGAATAG 59.246 44.000 0.00 0.00 37.28 1.73
5348 6099 5.055144 GGGTTTAGAAAGCGTAGGAATAGG 58.945 45.833 0.00 0.00 37.28 2.57
5349 6100 5.163374 GGGTTTAGAAAGCGTAGGAATAGGA 60.163 44.000 0.00 0.00 37.28 2.94
5350 6101 6.343703 GGTTTAGAAAGCGTAGGAATAGGAA 58.656 40.000 0.00 0.00 0.00 3.36
5351 6102 6.820152 GGTTTAGAAAGCGTAGGAATAGGAAA 59.180 38.462 0.00 0.00 0.00 3.13
5352 6103 7.498239 GGTTTAGAAAGCGTAGGAATAGGAAAT 59.502 37.037 0.00 0.00 0.00 2.17
5353 6104 8.336080 GTTTAGAAAGCGTAGGAATAGGAAATG 58.664 37.037 0.00 0.00 0.00 2.32
5354 6105 5.990668 AGAAAGCGTAGGAATAGGAAATGT 58.009 37.500 0.00 0.00 0.00 2.71
5355 6106 7.120923 AGAAAGCGTAGGAATAGGAAATGTA 57.879 36.000 0.00 0.00 0.00 2.29
5356 6107 6.985059 AGAAAGCGTAGGAATAGGAAATGTAC 59.015 38.462 0.00 0.00 0.00 2.90
5357 6108 5.864418 AGCGTAGGAATAGGAAATGTACA 57.136 39.130 0.00 0.00 0.00 2.90
5358 6109 5.844004 AGCGTAGGAATAGGAAATGTACAG 58.156 41.667 0.33 0.00 0.00 2.74
5359 6110 4.989168 GCGTAGGAATAGGAAATGTACAGG 59.011 45.833 0.33 0.00 0.00 4.00
5360 6111 5.221382 GCGTAGGAATAGGAAATGTACAGGA 60.221 44.000 0.33 0.00 0.00 3.86
5361 6112 6.684613 GCGTAGGAATAGGAAATGTACAGGAA 60.685 42.308 0.33 0.00 0.00 3.36
5362 6113 7.442656 CGTAGGAATAGGAAATGTACAGGAAT 58.557 38.462 0.33 0.00 0.00 3.01
5363 6114 8.582437 CGTAGGAATAGGAAATGTACAGGAATA 58.418 37.037 0.33 0.00 0.00 1.75
5366 6117 9.170890 AGGAATAGGAAATGTACAGGAATATGA 57.829 33.333 0.33 0.00 0.00 2.15
5367 6118 9.965902 GGAATAGGAAATGTACAGGAATATGAT 57.034 33.333 0.33 0.00 0.00 2.45
5372 6123 8.938883 AGGAAATGTACAGGAATATGATGTACT 58.061 33.333 18.63 6.30 46.04 2.73
5373 6124 8.993121 GGAAATGTACAGGAATATGATGTACTG 58.007 37.037 18.63 5.28 46.04 2.74
5374 6125 9.547753 GAAATGTACAGGAATATGATGTACTGT 57.452 33.333 18.63 9.83 46.04 3.55
5375 6126 9.547753 AAATGTACAGGAATATGATGTACTGTC 57.452 33.333 18.63 0.00 46.04 3.51
5376 6127 7.050970 TGTACAGGAATATGATGTACTGTCC 57.949 40.000 18.63 2.71 46.04 4.02
5377 6128 6.609616 TGTACAGGAATATGATGTACTGTCCA 59.390 38.462 18.63 3.78 46.04 4.02
5378 6129 5.918608 ACAGGAATATGATGTACTGTCCAC 58.081 41.667 0.00 0.00 34.37 4.02
5379 6130 5.663106 ACAGGAATATGATGTACTGTCCACT 59.337 40.000 0.00 0.00 34.37 4.00
5380 6131 5.987953 CAGGAATATGATGTACTGTCCACTG 59.012 44.000 0.00 0.00 0.00 3.66
5381 6132 5.899547 AGGAATATGATGTACTGTCCACTGA 59.100 40.000 0.00 0.00 0.00 3.41
5382 6133 6.041409 AGGAATATGATGTACTGTCCACTGAG 59.959 42.308 0.00 0.00 0.00 3.35
5383 6134 5.798125 ATATGATGTACTGTCCACTGAGG 57.202 43.478 0.00 0.00 39.47 3.86
5384 6135 2.179427 TGATGTACTGTCCACTGAGGG 58.821 52.381 0.00 0.00 38.24 4.30
5385 6136 0.905357 ATGTACTGTCCACTGAGGGC 59.095 55.000 0.00 0.00 44.53 5.19
5386 6137 1.192146 TGTACTGTCCACTGAGGGCC 61.192 60.000 0.00 0.00 43.21 5.80
5387 6138 0.905337 GTACTGTCCACTGAGGGCCT 60.905 60.000 5.25 5.25 43.21 5.19
5388 6139 0.708209 TACTGTCCACTGAGGGCCTA 59.292 55.000 5.73 0.00 43.21 3.93
5389 6140 0.043334 ACTGTCCACTGAGGGCCTAT 59.957 55.000 5.73 0.00 43.21 2.57
5390 6141 1.207791 CTGTCCACTGAGGGCCTATT 58.792 55.000 5.73 0.00 43.21 1.73
5391 6142 1.561542 CTGTCCACTGAGGGCCTATTT 59.438 52.381 5.73 0.00 43.21 1.40
5392 6143 1.281867 TGTCCACTGAGGGCCTATTTG 59.718 52.381 5.73 3.06 43.21 2.32
5393 6144 1.559682 GTCCACTGAGGGCCTATTTGA 59.440 52.381 5.73 0.00 35.31 2.69
5394 6145 2.173569 GTCCACTGAGGGCCTATTTGAT 59.826 50.000 5.73 0.00 35.31 2.57
5395 6146 2.852449 TCCACTGAGGGCCTATTTGATT 59.148 45.455 5.73 0.00 38.24 2.57
5396 6147 3.117888 TCCACTGAGGGCCTATTTGATTC 60.118 47.826 5.73 0.00 38.24 2.52
5397 6148 2.874701 CACTGAGGGCCTATTTGATTCG 59.125 50.000 5.73 0.00 0.00 3.34
5398 6149 1.876156 CTGAGGGCCTATTTGATTCGC 59.124 52.381 5.73 0.00 0.00 4.70
5399 6150 1.211703 TGAGGGCCTATTTGATTCGCA 59.788 47.619 5.73 0.00 0.00 5.10
5400 6151 1.876156 GAGGGCCTATTTGATTCGCAG 59.124 52.381 5.73 0.00 0.00 5.18
5401 6152 0.954452 GGGCCTATTTGATTCGCAGG 59.046 55.000 0.84 0.00 0.00 4.85
5402 6153 1.476833 GGGCCTATTTGATTCGCAGGA 60.477 52.381 0.84 0.00 0.00 3.86
5403 6154 2.508526 GGCCTATTTGATTCGCAGGAT 58.491 47.619 0.00 0.00 0.00 3.24
5404 6155 2.887152 GGCCTATTTGATTCGCAGGATT 59.113 45.455 0.00 0.00 0.00 3.01
5405 6156 3.304928 GGCCTATTTGATTCGCAGGATTG 60.305 47.826 0.00 0.00 0.00 2.67
5417 6168 2.074547 CAGGATTGCAAAAGCACAGG 57.925 50.000 1.71 0.00 0.00 4.00
5418 6169 1.614903 CAGGATTGCAAAAGCACAGGA 59.385 47.619 1.71 0.00 0.00 3.86
5419 6170 2.036217 CAGGATTGCAAAAGCACAGGAA 59.964 45.455 1.71 0.00 0.00 3.36
5420 6171 2.901839 AGGATTGCAAAAGCACAGGAAT 59.098 40.909 1.71 0.00 0.00 3.01
5421 6172 4.082081 CAGGATTGCAAAAGCACAGGAATA 60.082 41.667 1.71 0.00 0.00 1.75
5422 6173 4.713321 AGGATTGCAAAAGCACAGGAATAT 59.287 37.500 1.71 0.00 0.00 1.28
5423 6174 4.807304 GGATTGCAAAAGCACAGGAATATG 59.193 41.667 1.71 0.00 0.00 1.78
5424 6175 5.394443 GGATTGCAAAAGCACAGGAATATGA 60.394 40.000 1.71 0.00 0.00 2.15
5425 6176 5.465532 TTGCAAAAGCACAGGAATATGAA 57.534 34.783 0.00 0.00 0.00 2.57
5426 6177 5.465532 TGCAAAAGCACAGGAATATGAAA 57.534 34.783 0.00 0.00 0.00 2.69
5427 6178 5.851720 TGCAAAAGCACAGGAATATGAAAA 58.148 33.333 0.00 0.00 0.00 2.29
5428 6179 5.927689 TGCAAAAGCACAGGAATATGAAAAG 59.072 36.000 0.00 0.00 0.00 2.27
5429 6180 5.163923 GCAAAAGCACAGGAATATGAAAAGC 60.164 40.000 0.00 0.00 0.00 3.51
5430 6181 4.361451 AAGCACAGGAATATGAAAAGCG 57.639 40.909 0.00 0.00 0.00 4.68
5431 6182 3.347216 AGCACAGGAATATGAAAAGCGT 58.653 40.909 0.00 0.00 0.00 5.07
5432 6183 4.513442 AGCACAGGAATATGAAAAGCGTA 58.487 39.130 0.00 0.00 0.00 4.42
5433 6184 4.572389 AGCACAGGAATATGAAAAGCGTAG 59.428 41.667 0.00 0.00 0.00 3.51
5434 6185 4.260784 GCACAGGAATATGAAAAGCGTAGG 60.261 45.833 0.00 0.00 0.00 3.18
5435 6186 5.116180 CACAGGAATATGAAAAGCGTAGGA 58.884 41.667 0.00 0.00 0.00 2.94
5436 6187 5.760253 CACAGGAATATGAAAAGCGTAGGAT 59.240 40.000 0.00 0.00 0.00 3.24
5437 6188 6.260936 CACAGGAATATGAAAAGCGTAGGATT 59.739 38.462 0.00 0.00 0.00 3.01
5438 6189 6.260936 ACAGGAATATGAAAAGCGTAGGATTG 59.739 38.462 0.00 0.00 0.00 2.67
5439 6190 6.483307 CAGGAATATGAAAAGCGTAGGATTGA 59.517 38.462 0.00 0.00 0.00 2.57
5440 6191 7.012327 CAGGAATATGAAAAGCGTAGGATTGAA 59.988 37.037 0.00 0.00 0.00 2.69
5441 6192 7.556275 AGGAATATGAAAAGCGTAGGATTGAAA 59.444 33.333 0.00 0.00 0.00 2.69
5442 6193 8.352942 GGAATATGAAAAGCGTAGGATTGAAAT 58.647 33.333 0.00 0.00 0.00 2.17
5443 6194 9.173939 GAATATGAAAAGCGTAGGATTGAAATG 57.826 33.333 0.00 0.00 0.00 2.32
5444 6195 6.757897 ATGAAAAGCGTAGGATTGAAATGA 57.242 33.333 0.00 0.00 0.00 2.57
5445 6196 5.938322 TGAAAAGCGTAGGATTGAAATGAC 58.062 37.500 0.00 0.00 0.00 3.06
5446 6197 5.471797 TGAAAAGCGTAGGATTGAAATGACA 59.528 36.000 0.00 0.00 0.00 3.58
5447 6198 6.150976 TGAAAAGCGTAGGATTGAAATGACAT 59.849 34.615 0.00 0.00 0.00 3.06
5448 6199 5.490139 AAGCGTAGGATTGAAATGACATG 57.510 39.130 0.00 0.00 0.00 3.21
5449 6200 3.313526 AGCGTAGGATTGAAATGACATGC 59.686 43.478 0.00 0.00 0.00 4.06
5450 6201 3.548818 GCGTAGGATTGAAATGACATGCC 60.549 47.826 0.00 0.00 0.00 4.40
5451 6202 3.879295 CGTAGGATTGAAATGACATGCCT 59.121 43.478 0.00 0.00 0.00 4.75
5452 6203 5.056480 CGTAGGATTGAAATGACATGCCTA 58.944 41.667 0.00 0.00 0.00 3.93
5453 6204 5.702670 CGTAGGATTGAAATGACATGCCTAT 59.297 40.000 0.00 0.00 32.67 2.57
5454 6205 6.205464 CGTAGGATTGAAATGACATGCCTATT 59.795 38.462 0.00 0.00 32.67 1.73
5455 6206 6.401047 AGGATTGAAATGACATGCCTATTG 57.599 37.500 0.00 0.00 0.00 1.90
5456 6207 6.131264 AGGATTGAAATGACATGCCTATTGA 58.869 36.000 0.00 0.00 0.00 2.57
5457 6208 6.608405 AGGATTGAAATGACATGCCTATTGAA 59.392 34.615 0.00 0.00 0.00 2.69
5458 6209 7.289317 AGGATTGAAATGACATGCCTATTGAAT 59.711 33.333 0.00 0.00 0.00 2.57
5459 6210 7.929785 GGATTGAAATGACATGCCTATTGAATT 59.070 33.333 0.00 0.00 0.00 2.17
5460 6211 8.882415 ATTGAAATGACATGCCTATTGAATTC 57.118 30.769 0.00 0.00 0.00 2.17
5461 6212 6.808829 TGAAATGACATGCCTATTGAATTCC 58.191 36.000 2.27 0.00 0.00 3.01
5462 6213 6.608405 TGAAATGACATGCCTATTGAATTCCT 59.392 34.615 2.27 0.00 0.00 3.36
5463 6214 7.779326 TGAAATGACATGCCTATTGAATTCCTA 59.221 33.333 2.27 0.00 0.00 2.94
5464 6215 8.716674 AAATGACATGCCTATTGAATTCCTAT 57.283 30.769 2.27 0.00 0.00 2.57
5465 6216 9.812347 AAATGACATGCCTATTGAATTCCTATA 57.188 29.630 2.27 0.55 0.00 1.31
5466 6217 9.458727 AATGACATGCCTATTGAATTCCTATAG 57.541 33.333 2.27 9.74 32.64 1.31
5467 6218 7.397221 TGACATGCCTATTGAATTCCTATAGG 58.603 38.462 25.44 25.44 46.70 2.57
5468 6219 7.237471 TGACATGCCTATTGAATTCCTATAGGA 59.763 37.037 29.91 18.00 46.84 2.94
5469 6220 8.167691 ACATGCCTATTGAATTCCTATAGGAT 57.832 34.615 29.91 21.68 46.84 3.24
5470 6221 8.618385 ACATGCCTATTGAATTCCTATAGGATT 58.382 33.333 29.91 15.72 46.84 3.01
5471 6222 9.471702 CATGCCTATTGAATTCCTATAGGATTT 57.528 33.333 29.91 22.71 46.84 2.17
5472 6223 8.868522 TGCCTATTGAATTCCTATAGGATTTG 57.131 34.615 29.91 15.25 46.84 2.32
5473 6224 8.668653 TGCCTATTGAATTCCTATAGGATTTGA 58.331 33.333 29.91 18.67 46.84 2.69
5474 6225 9.171877 GCCTATTGAATTCCTATAGGATTTGAG 57.828 37.037 29.91 18.19 46.84 3.02
5479 6230 9.753674 TTGAATTCCTATAGGATTTGAGTTTGT 57.246 29.630 26.31 6.76 44.98 2.83
5480 6231 9.753674 TGAATTCCTATAGGATTTGAGTTTGTT 57.246 29.630 26.31 6.15 44.98 2.83
5482 6233 7.843490 TTCCTATAGGATTTGAGTTTGTTCG 57.157 36.000 22.30 0.00 44.98 3.95
5483 6234 7.177832 TCCTATAGGATTTGAGTTTGTTCGA 57.822 36.000 18.00 0.00 39.78 3.71
5484 6235 7.792032 TCCTATAGGATTTGAGTTTGTTCGAT 58.208 34.615 18.00 0.00 39.78 3.59
5485 6236 8.265055 TCCTATAGGATTTGAGTTTGTTCGATT 58.735 33.333 18.00 0.00 39.78 3.34
5486 6237 8.552034 CCTATAGGATTTGAGTTTGTTCGATTC 58.448 37.037 14.11 0.00 37.39 2.52
5487 6238 9.319143 CTATAGGATTTGAGTTTGTTCGATTCT 57.681 33.333 0.00 0.00 0.00 2.40
5489 6240 9.838339 ATAGGATTTGAGTTTGTTCGATTCTAT 57.162 29.630 0.00 0.00 0.00 1.98
5490 6241 8.202745 AGGATTTGAGTTTGTTCGATTCTATC 57.797 34.615 0.00 0.00 0.00 2.08
5491 6242 7.824289 AGGATTTGAGTTTGTTCGATTCTATCA 59.176 33.333 0.00 0.00 0.00 2.15
5492 6243 7.905493 GGATTTGAGTTTGTTCGATTCTATCAC 59.095 37.037 0.00 0.00 0.00 3.06
5493 6244 7.722795 TTTGAGTTTGTTCGATTCTATCACA 57.277 32.000 0.00 0.00 0.00 3.58
5494 6245 6.951256 TGAGTTTGTTCGATTCTATCACAG 57.049 37.500 0.00 0.00 0.00 3.66
5495 6246 6.687604 TGAGTTTGTTCGATTCTATCACAGA 58.312 36.000 0.00 0.00 0.00 3.41
5497 6248 7.655732 TGAGTTTGTTCGATTCTATCACAGAAA 59.344 33.333 0.00 0.00 46.29 2.52
5498 6249 8.378172 AGTTTGTTCGATTCTATCACAGAAAA 57.622 30.769 0.00 0.00 46.29 2.29
5499 6250 8.836413 AGTTTGTTCGATTCTATCACAGAAAAA 58.164 29.630 0.00 0.00 46.29 1.94
5522 6273 8.707938 AAAACAAAGGATTTCTTTCAAGAGTG 57.292 30.769 0.00 0.00 43.32 3.51
5523 6274 6.396829 ACAAAGGATTTCTTTCAAGAGTGG 57.603 37.500 0.00 0.00 43.32 4.00
5524 6275 6.129179 ACAAAGGATTTCTTTCAAGAGTGGA 58.871 36.000 0.00 0.00 43.32 4.02
5525 6276 6.039829 ACAAAGGATTTCTTTCAAGAGTGGAC 59.960 38.462 0.00 0.00 43.32 4.02
5526 6277 4.319177 AGGATTTCTTTCAAGAGTGGACG 58.681 43.478 0.00 0.00 36.22 4.79
5527 6278 4.065789 GGATTTCTTTCAAGAGTGGACGT 58.934 43.478 0.00 0.00 36.22 4.34
5528 6279 4.515567 GGATTTCTTTCAAGAGTGGACGTT 59.484 41.667 0.00 0.00 36.22 3.99
5529 6280 5.699458 GGATTTCTTTCAAGAGTGGACGTTA 59.301 40.000 0.00 0.00 36.22 3.18
5530 6281 6.128526 GGATTTCTTTCAAGAGTGGACGTTAG 60.129 42.308 0.00 0.00 36.22 2.34
5531 6282 5.524971 TTCTTTCAAGAGTGGACGTTAGA 57.475 39.130 0.00 0.00 36.22 2.10
5532 6283 5.524971 TCTTTCAAGAGTGGACGTTAGAA 57.475 39.130 0.00 0.00 0.00 2.10
5533 6284 6.097915 TCTTTCAAGAGTGGACGTTAGAAT 57.902 37.500 0.00 0.00 0.00 2.40
5534 6285 6.522054 TCTTTCAAGAGTGGACGTTAGAATT 58.478 36.000 0.00 0.00 0.00 2.17
5535 6286 6.423905 TCTTTCAAGAGTGGACGTTAGAATTG 59.576 38.462 0.00 0.00 0.00 2.32
5536 6287 3.994392 TCAAGAGTGGACGTTAGAATTGC 59.006 43.478 0.00 0.00 0.00 3.56
5537 6288 3.963428 AGAGTGGACGTTAGAATTGCT 57.037 42.857 0.00 0.00 0.00 3.91
5538 6289 5.047590 TCAAGAGTGGACGTTAGAATTGCTA 60.048 40.000 0.00 0.00 0.00 3.49
5539 6290 5.599999 AGAGTGGACGTTAGAATTGCTAT 57.400 39.130 0.00 0.00 0.00 2.97
5540 6291 6.710597 AGAGTGGACGTTAGAATTGCTATA 57.289 37.500 0.00 0.00 0.00 1.31
5541 6292 7.108841 AGAGTGGACGTTAGAATTGCTATAA 57.891 36.000 0.00 0.00 0.00 0.98
5542 6293 7.553334 AGAGTGGACGTTAGAATTGCTATAAA 58.447 34.615 0.00 0.00 0.00 1.40
5543 6294 8.038944 AGAGTGGACGTTAGAATTGCTATAAAA 58.961 33.333 0.00 0.00 0.00 1.52
5544 6295 8.732746 AGTGGACGTTAGAATTGCTATAAAAT 57.267 30.769 0.00 0.00 0.00 1.82
5545 6296 8.612619 AGTGGACGTTAGAATTGCTATAAAATG 58.387 33.333 0.00 0.00 0.00 2.32
5546 6297 7.376072 GTGGACGTTAGAATTGCTATAAAATGC 59.624 37.037 0.00 0.00 0.00 3.56
5547 6298 7.066404 TGGACGTTAGAATTGCTATAAAATGCA 59.934 33.333 0.00 0.00 37.42 3.96
5548 6299 7.587757 GGACGTTAGAATTGCTATAAAATGCAG 59.412 37.037 0.00 0.00 40.46 4.41
5549 6300 7.985476 ACGTTAGAATTGCTATAAAATGCAGT 58.015 30.769 0.00 0.00 40.46 4.40
5550 6301 9.104965 ACGTTAGAATTGCTATAAAATGCAGTA 57.895 29.630 0.00 0.00 40.46 2.74
5551 6302 9.370126 CGTTAGAATTGCTATAAAATGCAGTAC 57.630 33.333 0.00 0.00 40.46 2.73
5560 6311 9.734620 TGCTATAAAATGCAGTACAAATGAATC 57.265 29.630 0.00 0.00 34.84 2.52
5561 6312 9.185192 GCTATAAAATGCAGTACAAATGAATCC 57.815 33.333 0.00 0.00 0.00 3.01
5566 6317 8.523915 AAATGCAGTACAAATGAATCCATAGA 57.476 30.769 0.00 0.00 31.59 1.98
5567 6318 8.523915 AATGCAGTACAAATGAATCCATAGAA 57.476 30.769 0.00 0.00 31.59 2.10
5568 6319 8.701908 ATGCAGTACAAATGAATCCATAGAAT 57.298 30.769 0.00 0.00 31.59 2.40
5569 6320 8.523915 TGCAGTACAAATGAATCCATAGAATT 57.476 30.769 0.00 0.00 31.59 2.17
5570 6321 8.970020 TGCAGTACAAATGAATCCATAGAATTT 58.030 29.630 0.00 0.00 31.59 1.82
5571 6322 9.807649 GCAGTACAAATGAATCCATAGAATTTT 57.192 29.630 0.00 0.00 31.59 1.82
5599 6350 4.637483 GGATTCAATCCTGCGAATCAAA 57.363 40.909 9.43 0.00 46.12 2.69
5600 6351 4.354587 GGATTCAATCCTGCGAATCAAAC 58.645 43.478 9.43 0.00 46.12 2.93
5601 6352 3.469899 TTCAATCCTGCGAATCAAACG 57.530 42.857 0.00 0.00 0.00 3.60
5602 6353 2.694213 TCAATCCTGCGAATCAAACGA 58.306 42.857 0.00 0.00 0.00 3.85
5603 6354 3.270027 TCAATCCTGCGAATCAAACGAT 58.730 40.909 0.00 0.00 0.00 3.73
5604 6355 3.309682 TCAATCCTGCGAATCAAACGATC 59.690 43.478 0.00 0.00 0.00 3.69
5605 6356 2.378445 TCCTGCGAATCAAACGATCA 57.622 45.000 0.00 0.00 0.00 2.92
5606 6357 2.694213 TCCTGCGAATCAAACGATCAA 58.306 42.857 0.00 0.00 0.00 2.57
5607 6358 2.415168 TCCTGCGAATCAAACGATCAAC 59.585 45.455 0.00 0.00 0.00 3.18
5609 6360 1.171876 GCGAATCAAACGATCAACGC 58.828 50.000 0.00 0.00 46.94 4.84
5610 6361 1.463363 GCGAATCAAACGATCAACGCA 60.463 47.619 0.00 0.00 46.94 5.24
5611 6362 2.421523 CGAATCAAACGATCAACGCAG 58.578 47.619 0.00 0.00 46.94 5.18
5612 6363 2.774007 GAATCAAACGATCAACGCAGG 58.226 47.619 0.00 0.00 46.94 4.85
5613 6364 2.093306 ATCAAACGATCAACGCAGGA 57.907 45.000 0.00 0.00 46.94 3.86
5614 6365 1.872388 TCAAACGATCAACGCAGGAA 58.128 45.000 0.00 0.00 46.94 3.36
5615 6366 2.214347 TCAAACGATCAACGCAGGAAA 58.786 42.857 0.00 0.00 46.94 3.13
5616 6367 2.614520 TCAAACGATCAACGCAGGAAAA 59.385 40.909 0.00 0.00 46.94 2.29
5617 6368 3.065510 TCAAACGATCAACGCAGGAAAAA 59.934 39.130 0.00 0.00 46.94 1.94
5618 6369 3.915437 AACGATCAACGCAGGAAAAAT 57.085 38.095 0.00 0.00 46.94 1.82
5619 6370 3.915437 ACGATCAACGCAGGAAAAATT 57.085 38.095 0.00 0.00 46.94 1.82
5620 6371 3.821841 ACGATCAACGCAGGAAAAATTC 58.178 40.909 0.00 0.00 46.94 2.17
5621 6372 3.171277 CGATCAACGCAGGAAAAATTCC 58.829 45.455 0.75 0.75 41.97 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 1.468914 GAAACCGAAATGAGGGCAGAC 59.531 52.381 0.00 0.00 0.00 3.51
139 144 3.462678 GAGACGAGGAGGGGGTGC 61.463 72.222 0.00 0.00 0.00 5.01
150 155 2.801421 GCGAGGATGCTGAGACGA 59.199 61.111 0.00 0.00 0.00 4.20
348 353 1.871039 CAAACACCAGATTTCGACGGT 59.129 47.619 0.00 0.00 0.00 4.83
384 389 1.202290 ACAGCAGTTTTGACGCCAAAG 60.202 47.619 0.00 0.00 42.55 2.77
508 516 5.011023 AGCATACACATATCACCATTCTCGA 59.989 40.000 0.00 0.00 0.00 4.04
590 602 4.584327 AAGCTACAAACATTCCACCAAC 57.416 40.909 0.00 0.00 0.00 3.77
598 613 8.854614 AGATAAGTCTGAAAGCTACAAACATT 57.145 30.769 0.00 0.00 32.13 2.71
694 709 5.500234 AGTGTGTGACAAGGCATGTAATAT 58.500 37.500 0.00 0.00 44.12 1.28
712 727 3.925379 TCTAGCACAACCATGTAGTGTG 58.075 45.455 13.52 13.52 37.82 3.82
713 728 3.055819 CCTCTAGCACAACCATGTAGTGT 60.056 47.826 10.03 0.51 37.82 3.55
786 801 2.940158 ACCTTACCACCCACAAAAGAC 58.060 47.619 0.00 0.00 0.00 3.01
925 941 5.557576 CAGGACATGGAGATGGATAGAAA 57.442 43.478 0.00 0.00 33.39 2.52
1062 1078 1.146263 CCTTGGGGGACTACGATGC 59.854 63.158 0.00 0.00 37.23 3.91
1121 1137 0.268869 TCTGCCACCATATCCCCTCT 59.731 55.000 0.00 0.00 0.00 3.69
1264 1280 9.936759 ATTGTTTGTTAAGTGAGGAAAAAGAAA 57.063 25.926 0.00 0.00 0.00 2.52
1337 1358 3.160047 ATCCTCCGCTCTGCCAGG 61.160 66.667 0.00 0.00 0.00 4.45
1484 1509 7.896496 ACTTGGTACATTTCCCATGGTTAATAA 59.104 33.333 11.73 0.00 39.30 1.40
1576 1620 6.811253 TCGCAAGTTACCTTAATGAAACAT 57.189 33.333 0.00 0.00 39.48 2.71
2357 2442 6.645306 TCCCTGTACATGTCGATTTCATTAA 58.355 36.000 0.00 0.00 0.00 1.40
2692 2816 5.886960 AAAGCATGTACAAGATTCCAGAC 57.113 39.130 1.65 0.00 0.00 3.51
2835 2967 2.128771 TGCTGCAAGAGGGGAATTAC 57.871 50.000 0.00 0.00 34.07 1.89
2950 3100 4.836125 ATGCGCAAATAGGTAAGGAATG 57.164 40.909 17.11 0.00 0.00 2.67
2968 3118 6.089417 GTGCTAGTTTACCACAATTGAAATGC 59.911 38.462 13.59 8.62 0.00 3.56
3073 3239 2.205022 AGTGGATGGGTGTTCACATG 57.795 50.000 5.32 0.00 37.87 3.21
3218 3386 7.432148 AGTTGTATGTGATGGGTCTTATACA 57.568 36.000 0.00 0.00 34.81 2.29
3288 3456 4.198530 TCGTACGTGATGGGTCTTATACA 58.801 43.478 16.05 0.00 0.00 2.29
3374 3542 8.514136 AAATTTGCAATGATTTTGAAATGCTG 57.486 26.923 0.00 0.00 0.00 4.41
3589 3803 5.177327 GCCCAAACACAACATTGAACAATAG 59.823 40.000 0.00 0.00 0.00 1.73
3790 4007 5.818678 ACACAACTTACTTCTCATACCCA 57.181 39.130 0.00 0.00 0.00 4.51
3958 4178 2.294673 ACTAGGGGGCCTAATAAACCCA 60.295 50.000 12.89 0.00 46.21 4.51
4143 4363 1.979809 TAGGCCCCCTCTCATTTTGA 58.020 50.000 0.00 0.00 34.61 2.69
4248 4468 1.651138 CAACAGCGCTAGAAAGAGACG 59.349 52.381 10.99 0.00 0.00 4.18
4274 4494 6.183309 TGTTAACAAAACAAATTGGGTTGC 57.817 33.333 5.64 3.03 34.56 4.17
4278 4498 6.563753 CGAGCATGTTAACAAAACAAATTGGG 60.564 38.462 13.23 0.00 34.56 4.12
4320 5050 7.818997 TCTTCACTAGAACAGACAGACTTAA 57.181 36.000 0.00 0.00 0.00 1.85
4331 5061 8.335356 CGTTTCTTGATTTTCTTCACTAGAACA 58.665 33.333 0.00 0.00 42.50 3.18
4363 5093 2.019984 GGAATGCCCTAAGAACTGCAG 58.980 52.381 13.48 13.48 37.12 4.41
4387 5117 3.383698 AGGAGTCTGGATTAACGAGGA 57.616 47.619 0.00 0.00 0.00 3.71
4388 5118 4.184629 CAAAGGAGTCTGGATTAACGAGG 58.815 47.826 0.00 0.00 0.00 4.63
4389 5119 3.619038 GCAAAGGAGTCTGGATTAACGAG 59.381 47.826 0.00 0.00 0.00 4.18
4683 5415 3.119955 GGTTTTACTCGAACCAATGGAGC 60.120 47.826 6.16 0.00 44.71 4.70
4684 5416 4.680171 GGTTTTACTCGAACCAATGGAG 57.320 45.455 6.16 0.00 44.71 3.86
4706 5438 3.472652 AGCAATACAACACACCTCGAAA 58.527 40.909 0.00 0.00 0.00 3.46
4772 5504 1.134098 GCCATGCTACAGGCCTTAAGA 60.134 52.381 0.00 0.00 45.18 2.10
4826 5558 1.501170 TGGAAAATGGGTCCCTGACAA 59.499 47.619 10.00 0.00 33.68 3.18
4915 5647 0.463295 CTGCAGAGCCGTTCATCCAT 60.463 55.000 8.42 0.00 0.00 3.41
4957 5696 2.960384 CAAGCAATGGCCTCCATGATTA 59.040 45.455 3.32 0.00 44.40 1.75
4996 5735 6.097915 TCACCACCTCAAGAGTAAGTAAAG 57.902 41.667 0.00 0.00 0.00 1.85
4997 5736 6.464222 CATCACCACCTCAAGAGTAAGTAAA 58.536 40.000 0.00 0.00 0.00 2.01
4998 5737 5.568825 GCATCACCACCTCAAGAGTAAGTAA 60.569 44.000 0.00 0.00 0.00 2.24
5000 5739 3.307059 GCATCACCACCTCAAGAGTAAGT 60.307 47.826 0.00 0.00 0.00 2.24
5001 5740 3.055530 AGCATCACCACCTCAAGAGTAAG 60.056 47.826 0.00 0.00 0.00 2.34
5010 5749 0.253044 TTGCCTAGCATCACCACCTC 59.747 55.000 0.00 0.00 38.76 3.85
5031 5776 3.044305 GCTGCCACACCACGTCTC 61.044 66.667 0.00 0.00 0.00 3.36
5075 5820 4.988598 CAGCCGCACACCCGAAGT 62.989 66.667 0.00 0.00 0.00 3.01
5088 5833 3.051210 GGAACCACAAAGGCAGCC 58.949 61.111 1.84 1.84 43.14 4.85
5116 5862 4.464069 TTTTGGTTTGTCAAAGTCCCAG 57.536 40.909 0.00 0.00 37.82 4.45
5137 5883 0.755327 ACTGCCCAGCCGAAAGTTTT 60.755 50.000 0.00 0.00 0.00 2.43
5139 5885 0.755327 AAACTGCCCAGCCGAAAGTT 60.755 50.000 0.00 0.00 32.60 2.66
5150 5897 2.755103 CACTATTTCCCTCAAACTGCCC 59.245 50.000 0.00 0.00 0.00 5.36
5154 5901 4.993705 TGGTCACTATTTCCCTCAAACT 57.006 40.909 0.00 0.00 0.00 2.66
5156 5903 5.512942 TGATGGTCACTATTTCCCTCAAA 57.487 39.130 0.00 0.00 0.00 2.69
5158 5905 5.397899 GGATTGATGGTCACTATTTCCCTCA 60.398 44.000 0.00 0.00 0.00 3.86
5159 5906 5.066593 GGATTGATGGTCACTATTTCCCTC 58.933 45.833 0.00 0.00 0.00 4.30
5160 5907 4.444876 CGGATTGATGGTCACTATTTCCCT 60.445 45.833 0.00 0.00 0.00 4.20
5168 5915 1.135083 GTCGACGGATTGATGGTCACT 60.135 52.381 0.00 0.00 0.00 3.41
5185 5932 3.130280 TCATTCATGATGGATGGGTCG 57.870 47.619 13.50 0.00 36.37 4.79
5205 5956 2.169352 CCAGTCTTGTAGGCTGCTACAT 59.831 50.000 3.77 0.00 46.17 2.29
5212 5963 1.903183 GAGGTTCCAGTCTTGTAGGCT 59.097 52.381 0.00 0.00 0.00 4.58
5213 5964 1.066071 GGAGGTTCCAGTCTTGTAGGC 60.066 57.143 0.00 0.00 36.28 3.93
5214 5965 1.555533 GGGAGGTTCCAGTCTTGTAGG 59.444 57.143 0.00 0.00 38.64 3.18
5215 5966 2.541466 AGGGAGGTTCCAGTCTTGTAG 58.459 52.381 0.00 0.00 38.64 2.74
5216 5967 2.715763 AGGGAGGTTCCAGTCTTGTA 57.284 50.000 0.00 0.00 38.64 2.41
5217 5968 2.715763 TAGGGAGGTTCCAGTCTTGT 57.284 50.000 0.00 0.00 38.64 3.16
5218 5969 4.441634 CGTAATAGGGAGGTTCCAGTCTTG 60.442 50.000 0.00 0.00 38.64 3.02
5219 5970 3.705072 CGTAATAGGGAGGTTCCAGTCTT 59.295 47.826 0.00 0.00 38.64 3.01
5220 5971 3.297736 CGTAATAGGGAGGTTCCAGTCT 58.702 50.000 0.00 0.00 38.64 3.24
5221 5972 3.029570 ACGTAATAGGGAGGTTCCAGTC 58.970 50.000 0.00 0.00 38.64 3.51
5222 5973 3.111741 ACGTAATAGGGAGGTTCCAGT 57.888 47.619 0.00 0.00 38.64 4.00
5223 5974 3.573110 CCTACGTAATAGGGAGGTTCCAG 59.427 52.174 3.11 0.00 46.32 3.86
5224 5975 3.569491 CCTACGTAATAGGGAGGTTCCA 58.431 50.000 3.11 0.00 46.32 3.53
5232 5983 8.945140 GTGAAACACAACACCTACGTAATAGGG 61.945 44.444 7.74 2.61 46.20 3.53
5233 5984 6.128742 GTGAAACACAACACCTACGTAATAGG 60.129 42.308 1.13 1.13 46.86 2.57
5234 5985 6.399249 CGTGAAACACAACACCTACGTAATAG 60.399 42.308 0.00 0.00 35.74 1.73
5235 5986 5.401972 CGTGAAACACAACACCTACGTAATA 59.598 40.000 0.00 0.00 35.74 0.98
5236 5987 4.209703 CGTGAAACACAACACCTACGTAAT 59.790 41.667 0.00 0.00 35.74 1.89
5237 5988 3.551082 CGTGAAACACAACACCTACGTAA 59.449 43.478 0.00 0.00 35.74 3.18
5238 5989 3.114809 CGTGAAACACAACACCTACGTA 58.885 45.455 0.00 0.00 35.74 3.57
5239 5990 1.928503 CGTGAAACACAACACCTACGT 59.071 47.619 0.00 0.00 35.74 3.57
5240 5991 1.928503 ACGTGAAACACAACACCTACG 59.071 47.619 0.00 0.00 35.74 3.51
5241 5992 4.092816 CAAACGTGAAACACAACACCTAC 58.907 43.478 0.00 0.00 35.74 3.18
5242 5993 3.752222 ACAAACGTGAAACACAACACCTA 59.248 39.130 0.00 0.00 35.74 3.08
5243 5994 2.554893 ACAAACGTGAAACACAACACCT 59.445 40.909 0.00 0.00 35.74 4.00
5244 5995 2.936316 ACAAACGTGAAACACAACACC 58.064 42.857 0.00 0.00 35.74 4.16
5245 5996 4.714851 ACTACAAACGTGAAACACAACAC 58.285 39.130 0.00 0.00 35.74 3.32
5246 5997 5.407691 TGTACTACAAACGTGAAACACAACA 59.592 36.000 0.00 0.00 35.74 3.33
5247 5998 5.856314 TGTACTACAAACGTGAAACACAAC 58.144 37.500 0.00 0.00 35.74 3.32
5248 5999 6.313164 TCATGTACTACAAACGTGAAACACAA 59.687 34.615 0.00 0.00 39.34 3.33
5249 6000 5.811100 TCATGTACTACAAACGTGAAACACA 59.189 36.000 0.00 0.00 39.34 3.72
5250 6001 6.276611 TCATGTACTACAAACGTGAAACAC 57.723 37.500 0.00 0.00 39.34 3.32
5251 6002 8.652463 CATATCATGTACTACAAACGTGAAACA 58.348 33.333 2.56 0.00 43.92 2.83
5252 6003 7.634817 GCATATCATGTACTACAAACGTGAAAC 59.365 37.037 2.56 0.00 43.92 2.78
5253 6004 7.463515 CGCATATCATGTACTACAAACGTGAAA 60.464 37.037 2.56 0.00 43.92 2.69
5254 6005 6.020201 CGCATATCATGTACTACAAACGTGAA 60.020 38.462 2.56 0.00 43.92 3.18
5255 6006 5.457473 CGCATATCATGTACTACAAACGTGA 59.543 40.000 0.00 1.01 44.59 4.35
5256 6007 5.231357 ACGCATATCATGTACTACAAACGTG 59.769 40.000 0.00 0.00 35.58 4.49
5257 6008 5.345702 ACGCATATCATGTACTACAAACGT 58.654 37.500 0.00 0.00 0.00 3.99
5258 6009 5.883328 ACGCATATCATGTACTACAAACG 57.117 39.130 0.00 0.00 0.00 3.60
5259 6010 6.641314 AGCTACGCATATCATGTACTACAAAC 59.359 38.462 0.00 0.00 0.00 2.93
5260 6011 6.640907 CAGCTACGCATATCATGTACTACAAA 59.359 38.462 0.00 0.00 0.00 2.83
5261 6012 6.016610 TCAGCTACGCATATCATGTACTACAA 60.017 38.462 0.00 0.00 0.00 2.41
5262 6013 5.472137 TCAGCTACGCATATCATGTACTACA 59.528 40.000 0.00 0.00 0.00 2.74
5263 6014 5.795939 GTCAGCTACGCATATCATGTACTAC 59.204 44.000 0.00 0.00 0.00 2.73
5264 6015 5.705905 AGTCAGCTACGCATATCATGTACTA 59.294 40.000 0.00 0.00 0.00 1.82
5265 6016 4.520874 AGTCAGCTACGCATATCATGTACT 59.479 41.667 0.00 0.00 0.00 2.73
5266 6017 4.799678 AGTCAGCTACGCATATCATGTAC 58.200 43.478 0.00 0.00 0.00 2.90
5267 6018 5.222631 CAAGTCAGCTACGCATATCATGTA 58.777 41.667 0.00 0.00 0.00 2.29
5268 6019 4.053983 CAAGTCAGCTACGCATATCATGT 58.946 43.478 0.00 0.00 0.00 3.21
5269 6020 3.120752 GCAAGTCAGCTACGCATATCATG 60.121 47.826 0.00 0.00 0.00 3.07
5270 6021 3.062763 GCAAGTCAGCTACGCATATCAT 58.937 45.455 0.00 0.00 0.00 2.45
5271 6022 2.159114 TGCAAGTCAGCTACGCATATCA 60.159 45.455 0.00 0.00 31.07 2.15
5272 6023 2.473816 TGCAAGTCAGCTACGCATATC 58.526 47.619 0.00 0.00 31.07 1.63
5273 6024 2.477825 CTGCAAGTCAGCTACGCATAT 58.522 47.619 0.00 0.00 35.78 1.78
5274 6025 1.926561 CTGCAAGTCAGCTACGCATA 58.073 50.000 0.00 0.00 35.78 3.14
5275 6026 2.759783 CTGCAAGTCAGCTACGCAT 58.240 52.632 0.00 0.00 35.78 4.73
5276 6027 4.266983 CTGCAAGTCAGCTACGCA 57.733 55.556 0.00 0.00 35.78 5.24
5287 6038 2.480419 CCGTAGAGTTTTCCACTGCAAG 59.520 50.000 0.00 0.00 35.01 4.01
5288 6039 2.489971 CCGTAGAGTTTTCCACTGCAA 58.510 47.619 0.00 0.00 35.01 4.08
5289 6040 1.270625 CCCGTAGAGTTTTCCACTGCA 60.271 52.381 0.00 0.00 35.01 4.41
5290 6041 1.439679 CCCGTAGAGTTTTCCACTGC 58.560 55.000 0.00 0.00 35.01 4.40
5291 6042 1.002087 AGCCCGTAGAGTTTTCCACTG 59.998 52.381 0.00 0.00 35.01 3.66
5292 6043 1.275573 GAGCCCGTAGAGTTTTCCACT 59.724 52.381 0.00 0.00 39.07 4.00
5293 6044 1.675116 GGAGCCCGTAGAGTTTTCCAC 60.675 57.143 0.00 0.00 0.00 4.02
5294 6045 0.611714 GGAGCCCGTAGAGTTTTCCA 59.388 55.000 0.00 0.00 0.00 3.53
5295 6046 0.903236 AGGAGCCCGTAGAGTTTTCC 59.097 55.000 0.00 0.00 0.00 3.13
5296 6047 2.742589 CAAAGGAGCCCGTAGAGTTTTC 59.257 50.000 0.00 0.00 0.00 2.29
5297 6048 2.370849 TCAAAGGAGCCCGTAGAGTTTT 59.629 45.455 0.00 0.00 0.00 2.43
5298 6049 1.975680 TCAAAGGAGCCCGTAGAGTTT 59.024 47.619 0.00 0.00 0.00 2.66
5299 6050 1.640917 TCAAAGGAGCCCGTAGAGTT 58.359 50.000 0.00 0.00 0.00 3.01
5300 6051 1.867363 ATCAAAGGAGCCCGTAGAGT 58.133 50.000 0.00 0.00 0.00 3.24
5301 6052 2.168521 TGAATCAAAGGAGCCCGTAGAG 59.831 50.000 0.00 0.00 0.00 2.43
5302 6053 2.093658 GTGAATCAAAGGAGCCCGTAGA 60.094 50.000 0.00 0.00 0.00 2.59
5303 6054 2.280628 GTGAATCAAAGGAGCCCGTAG 58.719 52.381 0.00 0.00 0.00 3.51
5304 6055 1.626321 TGTGAATCAAAGGAGCCCGTA 59.374 47.619 0.00 0.00 0.00 4.02
5305 6056 0.400213 TGTGAATCAAAGGAGCCCGT 59.600 50.000 0.00 0.00 0.00 5.28
5306 6057 1.089920 CTGTGAATCAAAGGAGCCCG 58.910 55.000 0.00 0.00 0.00 6.13
5307 6058 1.467920 CCTGTGAATCAAAGGAGCCC 58.532 55.000 14.31 0.00 41.22 5.19
5308 6059 1.272147 ACCCTGTGAATCAAAGGAGCC 60.272 52.381 20.79 0.00 41.22 4.70
5309 6060 2.206576 ACCCTGTGAATCAAAGGAGC 57.793 50.000 20.79 0.00 41.22 4.70
5310 6061 5.560724 TCTAAACCCTGTGAATCAAAGGAG 58.439 41.667 20.79 12.73 41.22 3.69
5311 6062 5.576563 TCTAAACCCTGTGAATCAAAGGA 57.423 39.130 20.79 0.00 41.22 3.36
5312 6063 6.648879 TTTCTAAACCCTGTGAATCAAAGG 57.351 37.500 12.58 12.58 38.55 3.11
5313 6064 6.152379 GCTTTCTAAACCCTGTGAATCAAAG 58.848 40.000 0.00 0.00 0.00 2.77
5314 6065 5.278266 CGCTTTCTAAACCCTGTGAATCAAA 60.278 40.000 0.00 0.00 0.00 2.69
5315 6066 4.215399 CGCTTTCTAAACCCTGTGAATCAA 59.785 41.667 0.00 0.00 0.00 2.57
5316 6067 3.751175 CGCTTTCTAAACCCTGTGAATCA 59.249 43.478 0.00 0.00 0.00 2.57
5317 6068 3.751698 ACGCTTTCTAAACCCTGTGAATC 59.248 43.478 0.00 0.00 0.00 2.52
5318 6069 3.751518 ACGCTTTCTAAACCCTGTGAAT 58.248 40.909 0.00 0.00 0.00 2.57
5319 6070 3.202829 ACGCTTTCTAAACCCTGTGAA 57.797 42.857 0.00 0.00 0.00 3.18
5320 6071 2.922740 ACGCTTTCTAAACCCTGTGA 57.077 45.000 0.00 0.00 0.00 3.58
5321 6072 3.000727 CCTACGCTTTCTAAACCCTGTG 58.999 50.000 0.00 0.00 0.00 3.66
5322 6073 2.901839 TCCTACGCTTTCTAAACCCTGT 59.098 45.455 0.00 0.00 0.00 4.00
5323 6074 3.604875 TCCTACGCTTTCTAAACCCTG 57.395 47.619 0.00 0.00 0.00 4.45
5324 6075 4.838904 ATTCCTACGCTTTCTAAACCCT 57.161 40.909 0.00 0.00 0.00 4.34
5325 6076 5.055144 CCTATTCCTACGCTTTCTAAACCC 58.945 45.833 0.00 0.00 0.00 4.11
5326 6077 5.910614 TCCTATTCCTACGCTTTCTAAACC 58.089 41.667 0.00 0.00 0.00 3.27
5327 6078 7.838771 TTTCCTATTCCTACGCTTTCTAAAC 57.161 36.000 0.00 0.00 0.00 2.01
5328 6079 8.044908 ACATTTCCTATTCCTACGCTTTCTAAA 58.955 33.333 0.00 0.00 0.00 1.85
5329 6080 7.562135 ACATTTCCTATTCCTACGCTTTCTAA 58.438 34.615 0.00 0.00 0.00 2.10
5330 6081 7.120923 ACATTTCCTATTCCTACGCTTTCTA 57.879 36.000 0.00 0.00 0.00 2.10
5331 6082 5.990668 ACATTTCCTATTCCTACGCTTTCT 58.009 37.500 0.00 0.00 0.00 2.52
5332 6083 6.759827 TGTACATTTCCTATTCCTACGCTTTC 59.240 38.462 0.00 0.00 0.00 2.62
5333 6084 6.646267 TGTACATTTCCTATTCCTACGCTTT 58.354 36.000 0.00 0.00 0.00 3.51
5334 6085 6.229936 TGTACATTTCCTATTCCTACGCTT 57.770 37.500 0.00 0.00 0.00 4.68
5335 6086 5.221461 CCTGTACATTTCCTATTCCTACGCT 60.221 44.000 0.00 0.00 0.00 5.07
5336 6087 4.989168 CCTGTACATTTCCTATTCCTACGC 59.011 45.833 0.00 0.00 0.00 4.42
5337 6088 6.401047 TCCTGTACATTTCCTATTCCTACG 57.599 41.667 0.00 0.00 0.00 3.51
5340 6091 9.170890 TCATATTCCTGTACATTTCCTATTCCT 57.829 33.333 0.00 0.00 0.00 3.36
5341 6092 9.965902 ATCATATTCCTGTACATTTCCTATTCC 57.034 33.333 0.00 0.00 0.00 3.01
5346 6097 8.938883 AGTACATCATATTCCTGTACATTTCCT 58.061 33.333 16.02 0.00 44.83 3.36
5347 6098 8.993121 CAGTACATCATATTCCTGTACATTTCC 58.007 37.037 16.02 0.00 44.83 3.13
5348 6099 9.547753 ACAGTACATCATATTCCTGTACATTTC 57.452 33.333 16.02 0.00 44.83 2.17
5349 6100 9.547753 GACAGTACATCATATTCCTGTACATTT 57.452 33.333 16.02 5.29 44.83 2.32
5350 6101 8.150945 GGACAGTACATCATATTCCTGTACATT 58.849 37.037 16.02 6.95 44.83 2.71
5351 6102 7.290014 TGGACAGTACATCATATTCCTGTACAT 59.710 37.037 16.02 8.00 44.83 2.29
5352 6103 6.609616 TGGACAGTACATCATATTCCTGTACA 59.390 38.462 16.02 0.00 44.83 2.90
5353 6104 6.924060 GTGGACAGTACATCATATTCCTGTAC 59.076 42.308 0.00 9.63 43.47 2.90
5354 6105 6.839134 AGTGGACAGTACATCATATTCCTGTA 59.161 38.462 0.00 0.00 33.60 2.74
5355 6106 5.663106 AGTGGACAGTACATCATATTCCTGT 59.337 40.000 0.00 0.00 35.97 4.00
5356 6107 5.987953 CAGTGGACAGTACATCATATTCCTG 59.012 44.000 0.00 0.00 0.00 3.86
5357 6108 5.899547 TCAGTGGACAGTACATCATATTCCT 59.100 40.000 0.00 0.00 0.00 3.36
5358 6109 6.161855 TCAGTGGACAGTACATCATATTCC 57.838 41.667 0.00 0.00 0.00 3.01
5359 6110 6.219473 CCTCAGTGGACAGTACATCATATTC 58.781 44.000 0.00 0.00 38.35 1.75
5360 6111 5.070981 CCCTCAGTGGACAGTACATCATATT 59.929 44.000 0.00 0.00 38.35 1.28
5361 6112 4.590647 CCCTCAGTGGACAGTACATCATAT 59.409 45.833 0.00 0.00 38.35 1.78
5362 6113 3.960755 CCCTCAGTGGACAGTACATCATA 59.039 47.826 0.00 0.00 38.35 2.15
5363 6114 2.768527 CCCTCAGTGGACAGTACATCAT 59.231 50.000 0.00 0.00 38.35 2.45
5364 6115 2.179427 CCCTCAGTGGACAGTACATCA 58.821 52.381 0.00 0.00 38.35 3.07
5365 6116 1.134670 GCCCTCAGTGGACAGTACATC 60.135 57.143 0.00 0.00 38.35 3.06
5366 6117 0.905357 GCCCTCAGTGGACAGTACAT 59.095 55.000 0.00 0.00 38.35 2.29
5367 6118 1.192146 GGCCCTCAGTGGACAGTACA 61.192 60.000 0.00 0.00 38.35 2.90
5368 6119 0.905337 AGGCCCTCAGTGGACAGTAC 60.905 60.000 0.00 0.00 35.02 2.73
5369 6120 0.708209 TAGGCCCTCAGTGGACAGTA 59.292 55.000 0.00 0.00 35.02 2.74
5370 6121 0.043334 ATAGGCCCTCAGTGGACAGT 59.957 55.000 0.00 0.00 35.02 3.55
5371 6122 1.207791 AATAGGCCCTCAGTGGACAG 58.792 55.000 0.00 0.00 35.02 3.51
5372 6123 1.281867 CAAATAGGCCCTCAGTGGACA 59.718 52.381 0.00 0.00 35.02 4.02
5373 6124 1.559682 TCAAATAGGCCCTCAGTGGAC 59.440 52.381 0.00 0.00 38.35 4.02
5374 6125 1.965414 TCAAATAGGCCCTCAGTGGA 58.035 50.000 0.00 0.00 38.35 4.02
5375 6126 3.217626 GAATCAAATAGGCCCTCAGTGG 58.782 50.000 0.00 0.00 0.00 4.00
5376 6127 2.874701 CGAATCAAATAGGCCCTCAGTG 59.125 50.000 0.00 0.00 0.00 3.66
5377 6128 2.746472 GCGAATCAAATAGGCCCTCAGT 60.746 50.000 0.00 0.00 0.00 3.41
5378 6129 1.876156 GCGAATCAAATAGGCCCTCAG 59.124 52.381 0.00 0.00 0.00 3.35
5379 6130 1.211703 TGCGAATCAAATAGGCCCTCA 59.788 47.619 0.00 0.00 0.00 3.86
5380 6131 1.876156 CTGCGAATCAAATAGGCCCTC 59.124 52.381 0.00 0.00 0.00 4.30
5381 6132 1.477558 CCTGCGAATCAAATAGGCCCT 60.478 52.381 0.00 0.00 0.00 5.19
5382 6133 0.954452 CCTGCGAATCAAATAGGCCC 59.046 55.000 0.00 0.00 0.00 5.80
5383 6134 1.967319 TCCTGCGAATCAAATAGGCC 58.033 50.000 0.00 0.00 0.00 5.19
5384 6135 3.854784 GCAATCCTGCGAATCAAATAGGC 60.855 47.826 0.00 0.00 39.20 3.93
5385 6136 3.893720 GCAATCCTGCGAATCAAATAGG 58.106 45.455 0.00 0.00 39.20 2.57
5406 6157 5.061311 CGCTTTTCATATTCCTGTGCTTTTG 59.939 40.000 0.00 0.00 0.00 2.44
5407 6158 5.163513 CGCTTTTCATATTCCTGTGCTTTT 58.836 37.500 0.00 0.00 0.00 2.27
5408 6159 4.218417 ACGCTTTTCATATTCCTGTGCTTT 59.782 37.500 0.00 0.00 0.00 3.51
5409 6160 3.758554 ACGCTTTTCATATTCCTGTGCTT 59.241 39.130 0.00 0.00 0.00 3.91
5410 6161 3.347216 ACGCTTTTCATATTCCTGTGCT 58.653 40.909 0.00 0.00 0.00 4.40
5411 6162 3.764885 ACGCTTTTCATATTCCTGTGC 57.235 42.857 0.00 0.00 0.00 4.57
5412 6163 5.116180 TCCTACGCTTTTCATATTCCTGTG 58.884 41.667 0.00 0.00 0.00 3.66
5413 6164 5.353394 TCCTACGCTTTTCATATTCCTGT 57.647 39.130 0.00 0.00 0.00 4.00
5414 6165 6.483307 TCAATCCTACGCTTTTCATATTCCTG 59.517 38.462 0.00 0.00 0.00 3.86
5415 6166 6.591935 TCAATCCTACGCTTTTCATATTCCT 58.408 36.000 0.00 0.00 0.00 3.36
5416 6167 6.861065 TCAATCCTACGCTTTTCATATTCC 57.139 37.500 0.00 0.00 0.00 3.01
5417 6168 9.173939 CATTTCAATCCTACGCTTTTCATATTC 57.826 33.333 0.00 0.00 0.00 1.75
5418 6169 8.902806 TCATTTCAATCCTACGCTTTTCATATT 58.097 29.630 0.00 0.00 0.00 1.28
5419 6170 8.345565 GTCATTTCAATCCTACGCTTTTCATAT 58.654 33.333 0.00 0.00 0.00 1.78
5420 6171 7.335673 TGTCATTTCAATCCTACGCTTTTCATA 59.664 33.333 0.00 0.00 0.00 2.15
5421 6172 6.150976 TGTCATTTCAATCCTACGCTTTTCAT 59.849 34.615 0.00 0.00 0.00 2.57
5422 6173 5.471797 TGTCATTTCAATCCTACGCTTTTCA 59.528 36.000 0.00 0.00 0.00 2.69
5423 6174 5.938322 TGTCATTTCAATCCTACGCTTTTC 58.062 37.500 0.00 0.00 0.00 2.29
5424 6175 5.957842 TGTCATTTCAATCCTACGCTTTT 57.042 34.783 0.00 0.00 0.00 2.27
5425 6176 5.677091 GCATGTCATTTCAATCCTACGCTTT 60.677 40.000 0.00 0.00 0.00 3.51
5426 6177 4.201950 GCATGTCATTTCAATCCTACGCTT 60.202 41.667 0.00 0.00 0.00 4.68
5427 6178 3.313526 GCATGTCATTTCAATCCTACGCT 59.686 43.478 0.00 0.00 0.00 5.07
5428 6179 3.548818 GGCATGTCATTTCAATCCTACGC 60.549 47.826 0.00 0.00 0.00 4.42
5429 6180 3.879295 AGGCATGTCATTTCAATCCTACG 59.121 43.478 0.00 0.00 0.00 3.51
5430 6181 7.229306 TCAATAGGCATGTCATTTCAATCCTAC 59.771 37.037 0.00 0.00 32.53 3.18
5431 6182 7.289310 TCAATAGGCATGTCATTTCAATCCTA 58.711 34.615 0.00 0.00 33.45 2.94
5432 6183 6.131264 TCAATAGGCATGTCATTTCAATCCT 58.869 36.000 0.00 0.00 0.00 3.24
5433 6184 6.395426 TCAATAGGCATGTCATTTCAATCC 57.605 37.500 0.00 0.00 0.00 3.01
5434 6185 8.882415 AATTCAATAGGCATGTCATTTCAATC 57.118 30.769 0.00 0.00 0.00 2.67
5435 6186 7.929785 GGAATTCAATAGGCATGTCATTTCAAT 59.070 33.333 7.93 0.00 0.00 2.57
5436 6187 7.124599 AGGAATTCAATAGGCATGTCATTTCAA 59.875 33.333 7.93 0.00 0.00 2.69
5437 6188 6.608405 AGGAATTCAATAGGCATGTCATTTCA 59.392 34.615 7.93 0.00 0.00 2.69
5438 6189 7.047460 AGGAATTCAATAGGCATGTCATTTC 57.953 36.000 7.93 0.00 0.00 2.17
5439 6190 8.716674 ATAGGAATTCAATAGGCATGTCATTT 57.283 30.769 7.93 0.00 0.00 2.32
5440 6191 9.458727 CTATAGGAATTCAATAGGCATGTCATT 57.541 33.333 7.93 0.00 0.00 2.57
5441 6192 8.051535 CCTATAGGAATTCAATAGGCATGTCAT 58.948 37.037 23.07 0.00 36.75 3.06
5442 6193 7.237471 TCCTATAGGAATTCAATAGGCATGTCA 59.763 37.037 26.65 14.68 42.18 3.58
5443 6194 7.624549 TCCTATAGGAATTCAATAGGCATGTC 58.375 38.462 26.65 0.00 42.18 3.06
5444 6195 7.574021 TCCTATAGGAATTCAATAGGCATGT 57.426 36.000 26.65 3.74 42.18 3.21
5460 6211 8.438676 AATCGAACAAACTCAAATCCTATAGG 57.561 34.615 13.07 13.07 0.00 2.57
5461 6212 9.319143 AGAATCGAACAAACTCAAATCCTATAG 57.681 33.333 0.00 0.00 0.00 1.31
5463 6214 9.838339 ATAGAATCGAACAAACTCAAATCCTAT 57.162 29.630 0.00 0.00 0.00 2.57
5464 6215 9.314321 GATAGAATCGAACAAACTCAAATCCTA 57.686 33.333 0.00 0.00 0.00 2.94
5465 6216 7.824289 TGATAGAATCGAACAAACTCAAATCCT 59.176 33.333 0.00 0.00 0.00 3.24
5466 6217 7.905493 GTGATAGAATCGAACAAACTCAAATCC 59.095 37.037 0.00 0.00 0.00 3.01
5467 6218 8.443160 TGTGATAGAATCGAACAAACTCAAATC 58.557 33.333 0.00 0.00 0.00 2.17
5468 6219 8.322906 TGTGATAGAATCGAACAAACTCAAAT 57.677 30.769 0.00 0.00 0.00 2.32
5469 6220 7.655732 TCTGTGATAGAATCGAACAAACTCAAA 59.344 33.333 0.00 0.00 30.84 2.69
5470 6221 7.151976 TCTGTGATAGAATCGAACAAACTCAA 58.848 34.615 0.00 0.00 30.84 3.02
5471 6222 6.687604 TCTGTGATAGAATCGAACAAACTCA 58.312 36.000 0.00 0.00 30.84 3.41
5472 6223 7.582435 TTCTGTGATAGAATCGAACAAACTC 57.418 36.000 0.00 0.00 40.43 3.01
5473 6224 7.962964 TTTCTGTGATAGAATCGAACAAACT 57.037 32.000 0.00 0.00 44.54 2.66
5496 6247 9.154847 CACTCTTGAAAGAAATCCTTTGTTTTT 57.845 29.630 0.00 0.00 44.63 1.94
5497 6248 7.765819 CCACTCTTGAAAGAAATCCTTTGTTTT 59.234 33.333 0.00 0.00 44.63 2.43
5498 6249 7.124147 TCCACTCTTGAAAGAAATCCTTTGTTT 59.876 33.333 0.00 0.00 44.63 2.83
5499 6250 6.607198 TCCACTCTTGAAAGAAATCCTTTGTT 59.393 34.615 0.00 0.00 44.63 2.83
5500 6251 6.039829 GTCCACTCTTGAAAGAAATCCTTTGT 59.960 38.462 0.00 0.00 44.63 2.83
5501 6252 6.442112 GTCCACTCTTGAAAGAAATCCTTTG 58.558 40.000 0.00 0.00 44.63 2.77
5503 6254 4.757149 CGTCCACTCTTGAAAGAAATCCTT 59.243 41.667 0.00 0.00 34.03 3.36
5504 6255 4.202367 ACGTCCACTCTTGAAAGAAATCCT 60.202 41.667 0.00 0.00 34.03 3.24
5505 6256 4.065789 ACGTCCACTCTTGAAAGAAATCC 58.934 43.478 0.00 0.00 34.03 3.01
5506 6257 5.674933 AACGTCCACTCTTGAAAGAAATC 57.325 39.130 0.00 0.00 34.03 2.17
5507 6258 6.522054 TCTAACGTCCACTCTTGAAAGAAAT 58.478 36.000 0.00 0.00 34.03 2.17
5508 6259 5.909477 TCTAACGTCCACTCTTGAAAGAAA 58.091 37.500 0.00 0.00 34.03 2.52
5509 6260 5.524971 TCTAACGTCCACTCTTGAAAGAA 57.475 39.130 0.00 0.00 34.03 2.52
5510 6261 5.524971 TTCTAACGTCCACTCTTGAAAGA 57.475 39.130 0.00 0.00 0.00 2.52
5511 6262 6.593978 CAATTCTAACGTCCACTCTTGAAAG 58.406 40.000 0.00 0.00 0.00 2.62
5512 6263 5.049680 GCAATTCTAACGTCCACTCTTGAAA 60.050 40.000 0.00 0.00 0.00 2.69
5513 6264 4.451096 GCAATTCTAACGTCCACTCTTGAA 59.549 41.667 0.00 0.00 0.00 2.69
5514 6265 3.994392 GCAATTCTAACGTCCACTCTTGA 59.006 43.478 0.00 0.00 0.00 3.02
5515 6266 3.997021 AGCAATTCTAACGTCCACTCTTG 59.003 43.478 0.00 0.00 0.00 3.02
5516 6267 4.273148 AGCAATTCTAACGTCCACTCTT 57.727 40.909 0.00 0.00 0.00 2.85
5517 6268 3.963428 AGCAATTCTAACGTCCACTCT 57.037 42.857 0.00 0.00 0.00 3.24
5518 6269 7.766219 TTTATAGCAATTCTAACGTCCACTC 57.234 36.000 0.00 0.00 0.00 3.51
5519 6270 8.612619 CATTTTATAGCAATTCTAACGTCCACT 58.387 33.333 0.00 0.00 0.00 4.00
5520 6271 7.376072 GCATTTTATAGCAATTCTAACGTCCAC 59.624 37.037 0.00 0.00 0.00 4.02
5521 6272 7.066404 TGCATTTTATAGCAATTCTAACGTCCA 59.934 33.333 0.00 0.00 37.90 4.02
5522 6273 7.414436 TGCATTTTATAGCAATTCTAACGTCC 58.586 34.615 0.00 0.00 37.90 4.79
5523 6274 8.122952 ACTGCATTTTATAGCAATTCTAACGTC 58.877 33.333 0.00 0.00 40.73 4.34
5524 6275 7.985476 ACTGCATTTTATAGCAATTCTAACGT 58.015 30.769 0.00 0.00 40.73 3.99
5525 6276 9.370126 GTACTGCATTTTATAGCAATTCTAACG 57.630 33.333 0.00 0.00 40.73 3.18
5534 6285 9.734620 GATTCATTTGTACTGCATTTTATAGCA 57.265 29.630 0.00 0.00 39.25 3.49
5535 6286 9.185192 GGATTCATTTGTACTGCATTTTATAGC 57.815 33.333 0.00 0.00 0.00 2.97
5540 6291 8.970020 TCTATGGATTCATTTGTACTGCATTTT 58.030 29.630 0.00 0.00 34.96 1.82
5541 6292 8.523915 TCTATGGATTCATTTGTACTGCATTT 57.476 30.769 0.00 0.00 34.96 2.32
5542 6293 8.523915 TTCTATGGATTCATTTGTACTGCATT 57.476 30.769 0.00 0.00 34.96 3.56
5543 6294 8.701908 ATTCTATGGATTCATTTGTACTGCAT 57.298 30.769 0.00 0.00 34.96 3.96
5544 6295 8.523915 AATTCTATGGATTCATTTGTACTGCA 57.476 30.769 0.00 0.00 34.96 4.41
5545 6296 9.807649 AAAATTCTATGGATTCATTTGTACTGC 57.192 29.630 0.00 0.00 34.96 4.40
5578 6329 4.354587 GTTTGATTCGCAGGATTGAATCC 58.645 43.478 16.35 16.35 46.29 3.01
5579 6330 4.031028 CGTTTGATTCGCAGGATTGAATC 58.969 43.478 7.76 7.76 46.77 2.52
5580 6331 3.689161 TCGTTTGATTCGCAGGATTGAAT 59.311 39.130 0.00 0.00 37.52 2.57
5581 6332 3.070748 TCGTTTGATTCGCAGGATTGAA 58.929 40.909 0.00 0.00 0.00 2.69
5582 6333 2.694213 TCGTTTGATTCGCAGGATTGA 58.306 42.857 0.00 0.00 0.00 2.57
5583 6334 3.063861 TGATCGTTTGATTCGCAGGATTG 59.936 43.478 0.00 0.00 34.09 2.67
5584 6335 3.270027 TGATCGTTTGATTCGCAGGATT 58.730 40.909 0.00 0.00 34.09 3.01
5585 6336 2.905075 TGATCGTTTGATTCGCAGGAT 58.095 42.857 0.00 0.00 34.09 3.24
5586 6337 2.378445 TGATCGTTTGATTCGCAGGA 57.622 45.000 0.00 0.00 34.09 3.86
5587 6338 2.774007 GTTGATCGTTTGATTCGCAGG 58.226 47.619 0.00 0.00 34.09 4.85
5588 6339 2.421523 CGTTGATCGTTTGATTCGCAG 58.578 47.619 0.00 0.00 34.09 5.18
5589 6340 1.463363 GCGTTGATCGTTTGATTCGCA 60.463 47.619 13.78 0.00 42.77 5.10
5590 6341 1.171876 GCGTTGATCGTTTGATTCGC 58.828 50.000 0.00 0.00 39.82 4.70
5591 6342 2.421523 CTGCGTTGATCGTTTGATTCG 58.578 47.619 0.00 0.00 42.13 3.34
5592 6343 2.415168 TCCTGCGTTGATCGTTTGATTC 59.585 45.455 0.00 0.00 42.13 2.52
5593 6344 2.422597 TCCTGCGTTGATCGTTTGATT 58.577 42.857 0.00 0.00 42.13 2.57
5594 6345 2.093306 TCCTGCGTTGATCGTTTGAT 57.907 45.000 0.00 0.00 42.13 2.57
5595 6346 1.872388 TTCCTGCGTTGATCGTTTGA 58.128 45.000 0.00 0.00 42.13 2.69
5596 6347 2.679355 TTTCCTGCGTTGATCGTTTG 57.321 45.000 0.00 0.00 42.13 2.93
5597 6348 3.701532 TTTTTCCTGCGTTGATCGTTT 57.298 38.095 0.00 0.00 42.13 3.60
5598 6349 3.915437 ATTTTTCCTGCGTTGATCGTT 57.085 38.095 0.00 0.00 42.13 3.85
5599 6350 3.365969 GGAATTTTTCCTGCGTTGATCGT 60.366 43.478 0.00 0.00 46.57 3.73
5600 6351 3.171277 GGAATTTTTCCTGCGTTGATCG 58.829 45.455 0.00 0.00 46.57 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.