Multiple sequence alignment - TraesCS5A01G077500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G077500 chr5A 100.000 2495 0 0 1 2495 94689021 94691515 0.000000e+00 4608.0
1 TraesCS5A01G077500 chr5A 80.279 502 80 8 999 1498 94310799 94311283 6.560000e-96 361.0
2 TraesCS5A01G077500 chr5A 78.514 498 88 9 1001 1496 94092397 94092877 2.410000e-80 309.0
3 TraesCS5A01G077500 chr5A 91.892 74 6 0 561 634 458297092 458297165 1.220000e-18 104.0
4 TraesCS5A01G077500 chr5A 93.617 47 2 1 1974 2019 94690850 94690896 4.450000e-08 69.4
5 TraesCS5A01G077500 chr5A 93.617 47 2 1 1830 1876 94690994 94691039 4.450000e-08 69.4
6 TraesCS5A01G077500 chr5D 93.246 1066 54 10 834 1885 103985788 103984727 0.000000e+00 1554.0
7 TraesCS5A01G077500 chr5D 80.439 501 81 7 999 1498 104113148 104112664 1.410000e-97 366.0
8 TraesCS5A01G077500 chr5D 79.249 506 88 7 993 1497 104142963 104142474 1.110000e-88 337.0
9 TraesCS5A01G077500 chr5D 84.649 228 21 7 2271 2495 103984530 103984314 5.400000e-52 215.0
10 TraesCS5A01G077500 chr5B 91.184 1123 56 20 788 1885 113087230 113086126 0.000000e+00 1485.0
11 TraesCS5A01G077500 chr5B 82.947 475 57 20 1 465 113087697 113087237 8.310000e-110 407.0
12 TraesCS5A01G077500 chr5B 80.040 501 83 7 999 1498 113327975 113327491 3.050000e-94 355.0
13 TraesCS5A01G077500 chr5B 78.543 508 88 11 993 1497 113456862 113456373 5.180000e-82 315.0
14 TraesCS5A01G077500 chr5B 83.260 227 32 6 2271 2495 113085929 113085707 1.170000e-48 204.0
15 TraesCS5A01G077500 chr5B 87.097 93 12 0 464 556 88332258 88332350 3.390000e-19 106.0
16 TraesCS5A01G077500 chr6A 80.676 414 71 7 1090 1500 10138034 10137627 1.860000e-81 313.0
17 TraesCS5A01G077500 chr7D 78.426 343 57 16 11 341 96077799 96078136 9.040000e-50 207.0
18 TraesCS5A01G077500 chr7D 87.879 99 12 0 464 562 627404085 627403987 1.570000e-22 117.0
19 TraesCS5A01G077500 chr4D 90.110 91 9 0 466 556 100357432 100357522 4.360000e-23 119.0
20 TraesCS5A01G077500 chr4D 88.172 93 11 0 464 556 319082557 319082649 7.290000e-21 111.0
21 TraesCS5A01G077500 chr4D 88.889 90 10 0 470 559 460568165 460568076 7.290000e-21 111.0
22 TraesCS5A01G077500 chr4D 100.000 34 0 0 2219 2252 488877214 488877247 2.070000e-06 63.9
23 TraesCS5A01G077500 chr3B 87.879 99 12 0 464 562 606205110 606205012 1.570000e-22 117.0
24 TraesCS5A01G077500 chr7A 88.421 95 11 0 462 556 1806514 1806608 5.640000e-22 115.0
25 TraesCS5A01G077500 chr7A 87.755 98 9 3 464 559 649418006 649417910 7.290000e-21 111.0
26 TraesCS5A01G077500 chr7A 97.222 36 1 0 2215 2250 14303913 14303948 7.450000e-06 62.1
27 TraesCS5A01G077500 chr4A 94.595 74 4 0 561 634 571211358 571211285 5.640000e-22 115.0
28 TraesCS5A01G077500 chr4A 97.059 34 1 0 2219 2252 122624805 122624772 9.640000e-05 58.4
29 TraesCS5A01G077500 chr1B 88.889 90 10 0 470 559 6116389 6116300 7.290000e-21 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G077500 chr5A 94689021 94691515 2494 False 1582.266667 4608 95.744667 1 2495 3 chr5A.!!$F4 2494
1 TraesCS5A01G077500 chr5D 103984314 103985788 1474 True 884.500000 1554 88.947500 834 2495 2 chr5D.!!$R3 1661
2 TraesCS5A01G077500 chr5B 113085707 113087697 1990 True 698.666667 1485 85.797000 1 2495 3 chr5B.!!$R3 2494

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
621 628 0.039074 GGCTAGATCGTGGATGACCG 60.039 60.0 0.0 0.0 39.42 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2168 2260 0.032017 AAGAGGTCGAGCCATAGGGT 60.032 55.0 11.73 0.0 40.61 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
192 195 7.921214 TCGATCAAAATAGAGTGATTAGTGACC 59.079 37.037 0.00 0.00 34.61 4.02
225 228 7.962373 AGCAAATAGTTTTTGTCTTGTTTTTGC 59.038 29.630 7.71 0.00 43.19 3.68
239 242 0.179067 TTTTGCCCTGAAGTCGACGT 60.179 50.000 10.46 6.85 0.00 4.34
245 248 1.000060 CCCTGAAGTCGACGTTGGTTA 60.000 52.381 10.46 0.00 0.00 2.85
247 250 2.921754 CCTGAAGTCGACGTTGGTTATC 59.078 50.000 10.46 1.00 0.00 1.75
261 264 8.706492 ACGTTGGTTATCTATTCGTGAAAATA 57.294 30.769 0.00 0.00 0.00 1.40
355 358 9.474313 TGATTATAAAAACAAGGCATAAGAGGT 57.526 29.630 0.00 0.00 0.00 3.85
356 359 9.736023 GATTATAAAAACAAGGCATAAGAGGTG 57.264 33.333 0.00 0.00 0.00 4.00
360 364 6.515272 AAAACAAGGCATAAGAGGTGTATG 57.485 37.500 0.00 0.00 32.98 2.39
377 381 4.720046 TGTATGTACACCCAGAAAGCAAA 58.280 39.130 0.00 0.00 0.00 3.68
380 384 1.886542 GTACACCCAGAAAGCAAAGGG 59.113 52.381 0.00 0.00 46.96 3.95
387 391 5.053978 CCCAGAAAGCAAAGGGTATATCT 57.946 43.478 0.00 0.00 36.52 1.98
433 437 7.913789 TGTAGAATAACAATTCTGTACACCCT 58.086 34.615 10.20 0.00 40.74 4.34
434 438 9.038072 TGTAGAATAACAATTCTGTACACCCTA 57.962 33.333 10.20 0.00 40.74 3.53
477 484 7.843490 AAATAATGTTAGTGCATGTAGTCGT 57.157 32.000 0.00 0.00 0.00 4.34
478 485 7.843490 AATAATGTTAGTGCATGTAGTCGTT 57.157 32.000 0.00 0.00 0.00 3.85
479 486 5.530519 AATGTTAGTGCATGTAGTCGTTG 57.469 39.130 0.00 0.00 0.00 4.10
480 487 3.985008 TGTTAGTGCATGTAGTCGTTGT 58.015 40.909 0.00 0.00 0.00 3.32
481 488 4.373527 TGTTAGTGCATGTAGTCGTTGTT 58.626 39.130 0.00 0.00 0.00 2.83
482 489 5.530712 TGTTAGTGCATGTAGTCGTTGTTA 58.469 37.500 0.00 0.00 0.00 2.41
483 490 5.631929 TGTTAGTGCATGTAGTCGTTGTTAG 59.368 40.000 0.00 0.00 0.00 2.34
484 491 3.585862 AGTGCATGTAGTCGTTGTTAGG 58.414 45.455 0.00 0.00 0.00 2.69
485 492 3.006537 AGTGCATGTAGTCGTTGTTAGGT 59.993 43.478 0.00 0.00 0.00 3.08
486 493 3.122948 GTGCATGTAGTCGTTGTTAGGTG 59.877 47.826 0.00 0.00 0.00 4.00
487 494 2.093783 GCATGTAGTCGTTGTTAGGTGC 59.906 50.000 0.00 0.00 0.00 5.01
488 495 3.585862 CATGTAGTCGTTGTTAGGTGCT 58.414 45.455 0.00 0.00 0.00 4.40
489 496 3.293311 TGTAGTCGTTGTTAGGTGCTC 57.707 47.619 0.00 0.00 0.00 4.26
490 497 2.889045 TGTAGTCGTTGTTAGGTGCTCT 59.111 45.455 0.00 0.00 0.00 4.09
491 498 2.440539 AGTCGTTGTTAGGTGCTCTG 57.559 50.000 0.00 0.00 0.00 3.35
492 499 0.790814 GTCGTTGTTAGGTGCTCTGC 59.209 55.000 0.00 0.00 0.00 4.26
493 500 0.666274 TCGTTGTTAGGTGCTCTGCG 60.666 55.000 0.00 0.00 0.00 5.18
494 501 1.626654 CGTTGTTAGGTGCTCTGCGG 61.627 60.000 0.00 0.00 0.00 5.69
495 502 0.320421 GTTGTTAGGTGCTCTGCGGA 60.320 55.000 0.00 0.00 0.00 5.54
496 503 0.613260 TTGTTAGGTGCTCTGCGGAT 59.387 50.000 0.00 0.00 0.00 4.18
497 504 0.175760 TGTTAGGTGCTCTGCGGATC 59.824 55.000 0.00 0.00 0.00 3.36
498 505 0.461961 GTTAGGTGCTCTGCGGATCT 59.538 55.000 0.00 0.00 0.00 2.75
499 506 0.461548 TTAGGTGCTCTGCGGATCTG 59.538 55.000 0.00 0.00 0.00 2.90
500 507 0.395724 TAGGTGCTCTGCGGATCTGA 60.396 55.000 5.48 0.00 0.00 3.27
501 508 1.219124 GGTGCTCTGCGGATCTGAA 59.781 57.895 5.48 0.00 0.00 3.02
502 509 0.179062 GGTGCTCTGCGGATCTGAAT 60.179 55.000 5.48 0.00 0.00 2.57
503 510 0.935898 GTGCTCTGCGGATCTGAATG 59.064 55.000 5.48 0.00 0.00 2.67
504 511 0.538584 TGCTCTGCGGATCTGAATGT 59.461 50.000 5.48 0.00 0.00 2.71
505 512 1.756538 TGCTCTGCGGATCTGAATGTA 59.243 47.619 5.48 0.00 0.00 2.29
506 513 2.168313 TGCTCTGCGGATCTGAATGTAA 59.832 45.455 5.48 0.00 0.00 2.41
507 514 3.181462 TGCTCTGCGGATCTGAATGTAAT 60.181 43.478 5.48 0.00 0.00 1.89
508 515 3.812053 GCTCTGCGGATCTGAATGTAATT 59.188 43.478 5.48 0.00 40.93 1.40
509 516 4.274459 GCTCTGCGGATCTGAATGTAATTT 59.726 41.667 5.48 0.00 36.07 1.82
510 517 5.220931 GCTCTGCGGATCTGAATGTAATTTT 60.221 40.000 5.48 0.00 36.07 1.82
511 518 6.678900 GCTCTGCGGATCTGAATGTAATTTTT 60.679 38.462 5.48 0.00 36.07 1.94
512 519 7.467267 GCTCTGCGGATCTGAATGTAATTTTTA 60.467 37.037 5.48 0.00 36.07 1.52
513 520 8.450578 TCTGCGGATCTGAATGTAATTTTTAT 57.549 30.769 5.48 0.00 36.07 1.40
514 521 8.902806 TCTGCGGATCTGAATGTAATTTTTATT 58.097 29.630 5.48 0.00 36.07 1.40
562 569 9.872684 ACCATGATTGAAGATGAATAAATAGGT 57.127 29.630 0.00 0.00 0.00 3.08
566 573 8.632679 TGATTGAAGATGAATAAATAGGTTGGC 58.367 33.333 0.00 0.00 0.00 4.52
567 574 8.773033 ATTGAAGATGAATAAATAGGTTGGCT 57.227 30.769 0.00 0.00 0.00 4.75
568 575 8.593945 TTGAAGATGAATAAATAGGTTGGCTT 57.406 30.769 0.00 0.00 0.00 4.35
569 576 8.593945 TGAAGATGAATAAATAGGTTGGCTTT 57.406 30.769 0.00 0.00 0.00 3.51
570 577 8.469200 TGAAGATGAATAAATAGGTTGGCTTTG 58.531 33.333 0.00 0.00 0.00 2.77
571 578 7.961326 AGATGAATAAATAGGTTGGCTTTGT 57.039 32.000 0.00 0.00 0.00 2.83
572 579 9.474313 AAGATGAATAAATAGGTTGGCTTTGTA 57.526 29.630 0.00 0.00 0.00 2.41
573 580 9.646522 AGATGAATAAATAGGTTGGCTTTGTAT 57.353 29.630 0.00 0.00 0.00 2.29
576 583 9.914834 TGAATAAATAGGTTGGCTTTGTATAGT 57.085 29.630 0.00 0.00 0.00 2.12
578 585 9.914834 AATAAATAGGTTGGCTTTGTATAGTCA 57.085 29.630 0.00 0.00 0.00 3.41
583 590 7.807977 AGGTTGGCTTTGTATAGTCATATTG 57.192 36.000 0.00 0.00 28.36 1.90
584 591 7.573710 AGGTTGGCTTTGTATAGTCATATTGA 58.426 34.615 0.00 0.00 28.36 2.57
585 592 7.716998 AGGTTGGCTTTGTATAGTCATATTGAG 59.283 37.037 0.00 0.00 28.36 3.02
586 593 7.715249 GGTTGGCTTTGTATAGTCATATTGAGA 59.285 37.037 0.00 0.00 28.36 3.27
587 594 9.109393 GTTGGCTTTGTATAGTCATATTGAGAA 57.891 33.333 0.00 0.00 28.36 2.87
588 595 9.851686 TTGGCTTTGTATAGTCATATTGAGAAT 57.148 29.630 0.00 0.00 28.36 2.40
589 596 9.276590 TGGCTTTGTATAGTCATATTGAGAATG 57.723 33.333 0.00 0.00 0.00 2.67
590 597 8.233190 GGCTTTGTATAGTCATATTGAGAATGC 58.767 37.037 0.00 0.00 0.00 3.56
591 598 7.954248 GCTTTGTATAGTCATATTGAGAATGCG 59.046 37.037 0.00 0.00 0.00 4.73
592 599 9.196552 CTTTGTATAGTCATATTGAGAATGCGA 57.803 33.333 0.00 0.00 0.00 5.10
593 600 8.520835 TTGTATAGTCATATTGAGAATGCGAC 57.479 34.615 0.00 0.00 0.00 5.19
594 601 7.886338 TGTATAGTCATATTGAGAATGCGACT 58.114 34.615 0.00 0.00 37.44 4.18
595 602 7.809806 TGTATAGTCATATTGAGAATGCGACTG 59.190 37.037 0.00 0.00 35.67 3.51
596 603 5.268118 AGTCATATTGAGAATGCGACTGA 57.732 39.130 0.00 0.00 34.45 3.41
597 604 5.851720 AGTCATATTGAGAATGCGACTGAT 58.148 37.500 0.00 0.00 34.45 2.90
598 605 5.695363 AGTCATATTGAGAATGCGACTGATG 59.305 40.000 0.00 0.00 34.45 3.07
599 606 5.464722 GTCATATTGAGAATGCGACTGATGT 59.535 40.000 0.00 0.00 0.00 3.06
600 607 6.642540 GTCATATTGAGAATGCGACTGATGTA 59.357 38.462 0.00 0.00 0.00 2.29
601 608 7.330454 GTCATATTGAGAATGCGACTGATGTAT 59.670 37.037 0.00 0.00 0.00 2.29
602 609 5.919272 ATTGAGAATGCGACTGATGTATG 57.081 39.130 0.00 0.00 0.00 2.39
603 610 3.721035 TGAGAATGCGACTGATGTATGG 58.279 45.455 0.00 0.00 0.00 2.74
604 611 2.478134 GAGAATGCGACTGATGTATGGC 59.522 50.000 0.00 0.00 0.00 4.40
605 612 2.103771 AGAATGCGACTGATGTATGGCT 59.896 45.455 0.00 0.00 0.00 4.75
606 613 3.321968 AGAATGCGACTGATGTATGGCTA 59.678 43.478 0.00 0.00 0.00 3.93
607 614 2.800881 TGCGACTGATGTATGGCTAG 57.199 50.000 0.00 0.00 0.00 3.42
608 615 2.306847 TGCGACTGATGTATGGCTAGA 58.693 47.619 0.00 0.00 0.00 2.43
609 616 2.893489 TGCGACTGATGTATGGCTAGAT 59.107 45.455 0.00 0.00 0.00 1.98
610 617 3.057245 TGCGACTGATGTATGGCTAGATC 60.057 47.826 0.00 0.00 0.00 2.75
611 618 3.752731 CGACTGATGTATGGCTAGATCG 58.247 50.000 0.00 0.00 31.77 3.69
612 619 3.189495 CGACTGATGTATGGCTAGATCGT 59.811 47.826 0.00 0.00 31.77 3.73
613 620 4.480541 GACTGATGTATGGCTAGATCGTG 58.519 47.826 0.00 0.00 31.77 4.35
614 621 3.256879 ACTGATGTATGGCTAGATCGTGG 59.743 47.826 0.00 0.00 31.77 4.94
615 622 3.496331 TGATGTATGGCTAGATCGTGGA 58.504 45.455 0.00 0.00 31.77 4.02
616 623 4.089361 TGATGTATGGCTAGATCGTGGAT 58.911 43.478 0.00 0.00 31.77 3.41
617 624 3.942130 TGTATGGCTAGATCGTGGATG 57.058 47.619 0.00 0.00 0.00 3.51
618 625 3.496331 TGTATGGCTAGATCGTGGATGA 58.504 45.455 0.00 0.00 0.00 2.92
619 626 3.255888 TGTATGGCTAGATCGTGGATGAC 59.744 47.826 0.00 0.00 0.00 3.06
620 627 1.040646 TGGCTAGATCGTGGATGACC 58.959 55.000 0.00 0.00 0.00 4.02
621 628 0.039074 GGCTAGATCGTGGATGACCG 60.039 60.000 0.00 0.00 39.42 4.79
622 629 0.669077 GCTAGATCGTGGATGACCGT 59.331 55.000 0.00 0.00 39.42 4.83
623 630 1.600663 GCTAGATCGTGGATGACCGTG 60.601 57.143 0.00 0.00 39.42 4.94
624 631 0.384309 TAGATCGTGGATGACCGTGC 59.616 55.000 0.00 0.00 39.42 5.34
625 632 1.153647 GATCGTGGATGACCGTGCA 60.154 57.895 0.00 0.00 39.42 4.57
626 633 0.530650 GATCGTGGATGACCGTGCAT 60.531 55.000 0.00 0.00 39.42 3.96
627 634 0.750249 ATCGTGGATGACCGTGCATA 59.250 50.000 0.00 0.00 39.42 3.14
628 635 0.102300 TCGTGGATGACCGTGCATAG 59.898 55.000 0.00 0.00 39.42 2.23
629 636 0.179111 CGTGGATGACCGTGCATAGT 60.179 55.000 0.00 0.00 39.42 2.12
630 637 1.290203 GTGGATGACCGTGCATAGTG 58.710 55.000 0.00 0.00 39.42 2.74
631 638 0.177836 TGGATGACCGTGCATAGTGG 59.822 55.000 0.00 0.00 39.42 4.00
632 639 0.464036 GGATGACCGTGCATAGTGGA 59.536 55.000 0.00 0.00 0.00 4.02
633 640 1.134521 GGATGACCGTGCATAGTGGAA 60.135 52.381 0.00 0.00 0.00 3.53
634 641 2.485479 GGATGACCGTGCATAGTGGAAT 60.485 50.000 0.00 0.00 0.00 3.01
635 642 3.244078 GGATGACCGTGCATAGTGGAATA 60.244 47.826 0.00 0.00 0.00 1.75
636 643 3.897141 TGACCGTGCATAGTGGAATAA 57.103 42.857 0.00 0.00 0.00 1.40
637 644 4.209307 TGACCGTGCATAGTGGAATAAA 57.791 40.909 0.00 0.00 0.00 1.40
638 645 3.936453 TGACCGTGCATAGTGGAATAAAC 59.064 43.478 0.00 0.00 0.00 2.01
639 646 4.189231 GACCGTGCATAGTGGAATAAACT 58.811 43.478 0.00 0.00 0.00 2.66
640 647 4.189231 ACCGTGCATAGTGGAATAAACTC 58.811 43.478 0.00 0.00 0.00 3.01
641 648 4.081087 ACCGTGCATAGTGGAATAAACTCT 60.081 41.667 0.00 0.00 0.00 3.24
642 649 4.876107 CCGTGCATAGTGGAATAAACTCTT 59.124 41.667 0.00 0.00 0.00 2.85
643 650 5.354234 CCGTGCATAGTGGAATAAACTCTTT 59.646 40.000 0.00 0.00 0.00 2.52
644 651 6.537301 CCGTGCATAGTGGAATAAACTCTTTA 59.463 38.462 0.00 0.00 0.00 1.85
645 652 7.399523 CGTGCATAGTGGAATAAACTCTTTAC 58.600 38.462 0.00 0.00 0.00 2.01
646 653 7.465513 CGTGCATAGTGGAATAAACTCTTTACC 60.466 40.741 0.00 0.00 0.00 2.85
647 654 7.553044 GTGCATAGTGGAATAAACTCTTTACCT 59.447 37.037 0.00 0.00 0.00 3.08
648 655 8.107095 TGCATAGTGGAATAAACTCTTTACCTT 58.893 33.333 0.00 0.00 0.00 3.50
649 656 9.609346 GCATAGTGGAATAAACTCTTTACCTTA 57.391 33.333 0.00 0.00 0.00 2.69
704 711 1.077212 ACGGAGGGAGTAGCGCTAA 60.077 57.895 20.73 0.00 40.28 3.09
705 712 0.682209 ACGGAGGGAGTAGCGCTAAA 60.682 55.000 20.73 0.00 40.28 1.85
706 713 0.458669 CGGAGGGAGTAGCGCTAAAA 59.541 55.000 20.73 0.00 40.28 1.52
707 714 1.134907 CGGAGGGAGTAGCGCTAAAAA 60.135 52.381 20.73 0.00 40.28 1.94
748 755 8.345724 TGATAGAATAACTATTCCCTACGTCC 57.654 38.462 0.00 0.00 42.29 4.79
749 756 7.395489 TGATAGAATAACTATTCCCTACGTCCC 59.605 40.741 0.00 0.00 42.29 4.46
750 757 5.461327 AGAATAACTATTCCCTACGTCCCA 58.539 41.667 0.00 0.00 42.29 4.37
751 758 5.303845 AGAATAACTATTCCCTACGTCCCAC 59.696 44.000 0.00 0.00 42.29 4.61
752 759 2.537633 ACTATTCCCTACGTCCCACA 57.462 50.000 0.00 0.00 0.00 4.17
753 760 2.823959 ACTATTCCCTACGTCCCACAA 58.176 47.619 0.00 0.00 0.00 3.33
754 761 3.381335 ACTATTCCCTACGTCCCACAAT 58.619 45.455 0.00 0.00 0.00 2.71
755 762 3.778629 ACTATTCCCTACGTCCCACAATT 59.221 43.478 0.00 0.00 0.00 2.32
756 763 3.732048 ATTCCCTACGTCCCACAATTT 57.268 42.857 0.00 0.00 0.00 1.82
757 764 3.512219 TTCCCTACGTCCCACAATTTT 57.488 42.857 0.00 0.00 0.00 1.82
758 765 3.512219 TCCCTACGTCCCACAATTTTT 57.488 42.857 0.00 0.00 0.00 1.94
783 790 9.877178 TTTTTCCAAACTATGTTAAGCTTGAAA 57.123 25.926 9.86 0.00 0.00 2.69
784 791 9.877178 TTTTCCAAACTATGTTAAGCTTGAAAA 57.123 25.926 9.86 8.75 0.00 2.29
785 792 9.877178 TTTCCAAACTATGTTAAGCTTGAAAAA 57.123 25.926 9.86 0.00 0.00 1.94
807 814 4.727507 AATCATATCTCGATTCGGAGGG 57.272 45.455 6.18 0.00 34.74 4.30
808 815 3.434940 TCATATCTCGATTCGGAGGGA 57.565 47.619 6.18 0.95 34.74 4.20
809 816 3.348119 TCATATCTCGATTCGGAGGGAG 58.652 50.000 6.18 0.00 34.74 4.30
810 817 2.201921 TATCTCGATTCGGAGGGAGG 57.798 55.000 6.18 0.00 34.74 4.30
811 818 0.478942 ATCTCGATTCGGAGGGAGGA 59.521 55.000 6.18 0.00 34.74 3.71
812 819 0.179015 TCTCGATTCGGAGGGAGGAG 60.179 60.000 6.18 0.00 34.74 3.69
813 820 1.801309 CTCGATTCGGAGGGAGGAGC 61.801 65.000 6.18 0.00 0.00 4.70
814 821 2.731374 GATTCGGAGGGAGGAGCG 59.269 66.667 0.00 0.00 0.00 5.03
815 822 3.507597 GATTCGGAGGGAGGAGCGC 62.508 68.421 0.00 0.00 0.00 5.92
816 823 4.761058 TTCGGAGGGAGGAGCGCT 62.761 66.667 11.27 11.27 43.30 5.92
817 824 2.642183 ATTCGGAGGGAGGAGCGCTA 62.642 60.000 11.50 0.00 40.28 4.26
859 866 2.680913 CCTTCGTGCCAAGCCTTCG 61.681 63.158 0.00 0.00 0.00 3.79
911 927 1.280998 CCCTGGGCCTATAAATACCCG 59.719 57.143 4.53 0.00 46.02 5.28
921 937 5.287226 CCTATAAATACCCGTCACAGTGAC 58.713 45.833 22.09 22.09 43.65 3.67
931 947 2.484065 CGTCACAGTGACCCTTAAACCA 60.484 50.000 25.11 0.00 44.20 3.67
993 1009 1.000955 ACCAGCGAGTAACACTCCAAG 59.999 52.381 0.89 0.00 42.12 3.61
1140 1156 2.743928 CTGTGCGGCAAGGACCTC 60.744 66.667 3.23 0.00 40.82 3.85
1149 1165 0.971447 GCAAGGACCTCTACCTCGGT 60.971 60.000 0.00 0.00 36.67 4.69
1504 1520 1.273838 ACAACCCCTAGATCCAGCTGA 60.274 52.381 17.39 1.21 0.00 4.26
1539 1555 0.674895 AGTTTGCAGCTCGGTGATCC 60.675 55.000 0.00 0.00 0.00 3.36
1568 1585 5.518847 CGTATTGCAGCTGCTAGTTAGTTAA 59.481 40.000 36.61 20.70 42.66 2.01
1628 1653 6.478588 GTCGATTTGCTGTTCAATTAGTAGG 58.521 40.000 0.00 0.00 34.12 3.18
1646 1672 1.163420 GGTGCGTGGTGAATGTGTGA 61.163 55.000 0.00 0.00 0.00 3.58
1662 1688 7.879677 TGAATGTGTGACTAGAGATGTTTCATT 59.120 33.333 0.00 0.00 0.00 2.57
1664 1690 6.524734 TGTGTGACTAGAGATGTTTCATTGT 58.475 36.000 0.00 0.00 0.00 2.71
1696 1722 0.668401 TGCATGTCGTCAGCTCTGTG 60.668 55.000 0.00 0.00 0.00 3.66
1703 1729 1.080434 GTCAGCTCTGTGTCCGTCC 60.080 63.158 0.00 0.00 0.00 4.79
1720 1746 1.132262 GTCCTTGGTGTGTTGTGTGTG 59.868 52.381 0.00 0.00 0.00 3.82
1730 1756 5.086058 GTGTGTTGTGTGTGTTCTAGTTTG 58.914 41.667 0.00 0.00 0.00 2.93
1736 1764 7.766738 TGTTGTGTGTGTTCTAGTTTGAATCTA 59.233 33.333 0.00 0.00 0.00 1.98
1737 1765 7.709269 TGTGTGTGTTCTAGTTTGAATCTAC 57.291 36.000 0.00 0.00 0.00 2.59
1758 1786 5.823861 ACTTTAAAATTTGGCTGGGTCAT 57.176 34.783 0.00 0.00 0.00 3.06
1759 1787 5.550290 ACTTTAAAATTTGGCTGGGTCATG 58.450 37.500 0.00 0.00 0.00 3.07
1766 1794 2.048603 GGCTGGGTCATGGAACTGC 61.049 63.158 0.00 0.00 0.00 4.40
1771 1799 1.133513 TGGGTCATGGAACTGCTGTTT 60.134 47.619 10.54 0.00 36.39 2.83
1824 1852 1.064505 CAATGTGCATCCACGCTAAGG 59.935 52.381 0.00 0.00 45.04 2.69
1838 1866 2.677037 CGCTAAGGGGAGAAACATTCGT 60.677 50.000 0.00 0.00 34.02 3.85
1869 1905 1.000993 ATGCCCTCACTCTCCTCGT 59.999 57.895 0.00 0.00 0.00 4.18
1912 2003 8.206867 TGATGTAAAATGTGATCTAGGAAGAGG 58.793 37.037 0.00 0.00 34.49 3.69
1914 2005 8.146053 TGTAAAATGTGATCTAGGAAGAGGAA 57.854 34.615 0.00 0.00 34.49 3.36
1916 2007 6.627087 AAATGTGATCTAGGAAGAGGAACA 57.373 37.500 0.00 0.00 34.49 3.18
1932 2024 4.536765 AGGAACAAACAGAGGTTGTCAAT 58.463 39.130 0.38 0.00 39.73 2.57
1938 2030 5.163622 ACAAACAGAGGTTGTCAATGTGAAG 60.164 40.000 0.00 0.00 39.73 3.02
1942 2034 1.133513 AGGTTGTCAATGTGAAGCCCA 60.134 47.619 0.00 0.00 0.00 5.36
1950 2042 3.008330 CAATGTGAAGCCCAAGAGAGAG 58.992 50.000 0.00 0.00 0.00 3.20
1952 2044 0.612744 GTGAAGCCCAAGAGAGAGCT 59.387 55.000 0.00 0.00 37.10 4.09
1953 2045 0.612229 TGAAGCCCAAGAGAGAGCTG 59.388 55.000 0.00 0.00 35.30 4.24
1955 2047 0.903942 AAGCCCAAGAGAGAGCTGAG 59.096 55.000 0.00 0.00 35.30 3.35
1957 2049 1.122227 GCCCAAGAGAGAGCTGAGAT 58.878 55.000 0.00 0.00 0.00 2.75
1958 2050 2.091389 AGCCCAAGAGAGAGCTGAGATA 60.091 50.000 0.00 0.00 33.41 1.98
1961 2053 4.202346 GCCCAAGAGAGAGCTGAGATAAAT 60.202 45.833 0.00 0.00 0.00 1.40
1962 2054 5.540911 CCCAAGAGAGAGCTGAGATAAATC 58.459 45.833 0.00 0.00 0.00 2.17
1963 2055 5.305128 CCCAAGAGAGAGCTGAGATAAATCT 59.695 44.000 0.00 0.00 40.50 2.40
1964 2056 6.493115 CCCAAGAGAGAGCTGAGATAAATCTA 59.507 42.308 0.00 0.00 37.25 1.98
1965 2057 7.015098 CCCAAGAGAGAGCTGAGATAAATCTAA 59.985 40.741 0.00 0.00 37.25 2.10
1966 2058 8.420222 CCAAGAGAGAGCTGAGATAAATCTAAA 58.580 37.037 0.00 0.00 37.25 1.85
1967 2059 9.985730 CAAGAGAGAGCTGAGATAAATCTAAAT 57.014 33.333 0.00 0.00 37.25 1.40
1968 2060 9.985730 AAGAGAGAGCTGAGATAAATCTAAATG 57.014 33.333 0.00 0.00 37.25 2.32
1969 2061 9.365906 AGAGAGAGCTGAGATAAATCTAAATGA 57.634 33.333 0.00 0.00 37.25 2.57
1971 2063 9.932207 AGAGAGCTGAGATAAATCTAAATGATG 57.068 33.333 0.00 0.00 37.25 3.07
1972 2064 9.709495 GAGAGCTGAGATAAATCTAAATGATGT 57.291 33.333 0.00 0.00 37.25 3.06
1984 2076 8.841444 AATCTAAATGATGTAAACATTCGTGC 57.159 30.769 0.00 0.00 38.46 5.34
1985 2077 7.371126 TCTAAATGATGTAAACATTCGTGCA 57.629 32.000 0.00 0.00 38.46 4.57
1986 2078 7.984391 TCTAAATGATGTAAACATTCGTGCAT 58.016 30.769 0.00 0.00 38.46 3.96
1987 2079 6.874297 AAATGATGTAAACATTCGTGCATG 57.126 33.333 0.00 0.00 38.46 4.06
1988 2080 4.354071 TGATGTAAACATTCGTGCATGG 57.646 40.909 5.98 0.00 36.57 3.66
1989 2081 2.627863 TGTAAACATTCGTGCATGGC 57.372 45.000 5.98 0.00 0.00 4.40
1990 2082 1.201181 TGTAAACATTCGTGCATGGCC 59.799 47.619 5.98 0.00 0.00 5.36
1991 2083 0.449786 TAAACATTCGTGCATGGCCG 59.550 50.000 5.98 0.00 0.00 6.13
1992 2084 2.817470 AAACATTCGTGCATGGCCGC 62.817 55.000 5.98 0.00 0.00 6.53
1993 2085 3.813143 CATTCGTGCATGGCCGCA 61.813 61.111 5.98 0.59 40.32 5.69
2006 2098 4.431131 CCGCACATGCCCTCCCTT 62.431 66.667 0.00 0.00 37.91 3.95
2007 2099 2.361610 CGCACATGCCCTCCCTTT 60.362 61.111 0.00 0.00 37.91 3.11
2008 2100 2.409870 CGCACATGCCCTCCCTTTC 61.410 63.158 0.00 0.00 37.91 2.62
2009 2101 2.054453 GCACATGCCCTCCCTTTCC 61.054 63.158 0.00 0.00 34.31 3.13
2010 2102 1.693640 CACATGCCCTCCCTTTCCT 59.306 57.895 0.00 0.00 0.00 3.36
2011 2103 0.394899 CACATGCCCTCCCTTTCCTC 60.395 60.000 0.00 0.00 0.00 3.71
2012 2104 1.153086 CATGCCCTCCCTTTCCTCG 60.153 63.158 0.00 0.00 0.00 4.63
2021 2113 0.605589 CCCTTTCCTCGTGTGGAACC 60.606 60.000 3.02 0.00 44.83 3.62
2031 2123 5.188163 TCCTCGTGTGGAACCAAGATTAATA 59.812 40.000 0.00 0.00 34.36 0.98
2042 2134 3.686726 CCAAGATTAATATCTCCGGCAGC 59.313 47.826 0.00 0.00 40.26 5.25
2043 2135 3.238108 AGATTAATATCTCCGGCAGCG 57.762 47.619 0.00 0.00 36.34 5.18
2044 2136 2.826128 AGATTAATATCTCCGGCAGCGA 59.174 45.455 0.00 0.00 36.34 4.93
2045 2137 2.724977 TTAATATCTCCGGCAGCGAG 57.275 50.000 0.00 0.00 0.00 5.03
2046 2138 1.905637 TAATATCTCCGGCAGCGAGA 58.094 50.000 0.00 2.81 40.54 4.04
2047 2139 1.040646 AATATCTCCGGCAGCGAGAA 58.959 50.000 0.00 0.00 39.72 2.87
2048 2140 0.315568 ATATCTCCGGCAGCGAGAAC 59.684 55.000 0.00 0.00 39.72 3.01
2075 2167 6.413052 AGAACTATGCACAAGACAGAATCAT 58.587 36.000 4.95 0.00 0.00 2.45
2086 2178 0.935898 CAGAATCATCAGCCGCTGTC 59.064 55.000 19.77 9.75 32.61 3.51
2087 2179 0.829333 AGAATCATCAGCCGCTGTCT 59.171 50.000 19.77 11.85 32.61 3.41
2088 2180 2.034878 AGAATCATCAGCCGCTGTCTA 58.965 47.619 19.77 6.98 32.61 2.59
2089 2181 2.632028 AGAATCATCAGCCGCTGTCTAT 59.368 45.455 19.77 8.88 32.61 1.98
2090 2182 3.070734 AGAATCATCAGCCGCTGTCTATT 59.929 43.478 19.77 15.83 32.61 1.73
2091 2183 2.988010 TCATCAGCCGCTGTCTATTT 57.012 45.000 19.77 0.00 32.61 1.40
2092 2184 3.266510 TCATCAGCCGCTGTCTATTTT 57.733 42.857 19.77 0.00 32.61 1.82
2093 2185 3.609853 TCATCAGCCGCTGTCTATTTTT 58.390 40.909 19.77 0.00 32.61 1.94
2094 2186 4.765273 TCATCAGCCGCTGTCTATTTTTA 58.235 39.130 19.77 0.00 32.61 1.52
2095 2187 4.811024 TCATCAGCCGCTGTCTATTTTTAG 59.189 41.667 19.77 0.00 32.61 1.85
2096 2188 4.465632 TCAGCCGCTGTCTATTTTTAGA 57.534 40.909 19.77 0.00 32.61 2.10
2097 2189 4.827692 TCAGCCGCTGTCTATTTTTAGAA 58.172 39.130 19.77 0.00 32.61 2.10
2098 2190 4.870426 TCAGCCGCTGTCTATTTTTAGAAG 59.130 41.667 19.77 0.00 32.61 2.85
2099 2191 4.631813 CAGCCGCTGTCTATTTTTAGAAGT 59.368 41.667 12.54 0.00 0.00 3.01
2100 2192 4.631813 AGCCGCTGTCTATTTTTAGAAGTG 59.368 41.667 0.00 0.00 0.00 3.16
2101 2193 4.728021 GCCGCTGTCTATTTTTAGAAGTGC 60.728 45.833 0.00 0.00 0.00 4.40
2102 2194 4.391830 CCGCTGTCTATTTTTAGAAGTGCA 59.608 41.667 0.00 0.00 0.00 4.57
2103 2195 5.065218 CCGCTGTCTATTTTTAGAAGTGCAT 59.935 40.000 0.00 0.00 0.00 3.96
2104 2196 5.961843 CGCTGTCTATTTTTAGAAGTGCATG 59.038 40.000 0.00 0.00 0.00 4.06
2105 2197 6.183360 CGCTGTCTATTTTTAGAAGTGCATGA 60.183 38.462 0.00 0.00 0.00 3.07
2106 2198 6.963805 GCTGTCTATTTTTAGAAGTGCATGAC 59.036 38.462 0.00 0.00 0.00 3.06
2107 2199 7.148340 GCTGTCTATTTTTAGAAGTGCATGACT 60.148 37.037 0.00 0.00 35.94 3.41
2108 2200 8.256611 TGTCTATTTTTAGAAGTGCATGACTC 57.743 34.615 0.00 0.00 31.73 3.36
2109 2201 8.097038 TGTCTATTTTTAGAAGTGCATGACTCT 58.903 33.333 0.00 0.00 31.73 3.24
2110 2202 8.386606 GTCTATTTTTAGAAGTGCATGACTCTG 58.613 37.037 0.00 0.00 31.73 3.35
2111 2203 8.314021 TCTATTTTTAGAAGTGCATGACTCTGA 58.686 33.333 0.00 0.00 31.73 3.27
2112 2204 7.934855 ATTTTTAGAAGTGCATGACTCTGAT 57.065 32.000 0.00 0.00 31.73 2.90
2113 2205 6.732531 TTTTAGAAGTGCATGACTCTGATG 57.267 37.500 0.00 0.00 31.73 3.07
2114 2206 5.665916 TTAGAAGTGCATGACTCTGATGA 57.334 39.130 0.00 0.00 31.73 2.92
2115 2207 4.548451 AGAAGTGCATGACTCTGATGAA 57.452 40.909 0.00 0.00 31.73 2.57
2116 2208 4.903054 AGAAGTGCATGACTCTGATGAAA 58.097 39.130 0.00 0.00 31.73 2.69
2117 2209 4.936411 AGAAGTGCATGACTCTGATGAAAG 59.064 41.667 0.00 0.00 31.73 2.62
2118 2210 4.548451 AGTGCATGACTCTGATGAAAGA 57.452 40.909 0.00 0.00 0.00 2.52
2120 2212 4.222366 AGTGCATGACTCTGATGAAAGAGA 59.778 41.667 8.16 0.00 45.59 3.10
2121 2213 4.329528 GTGCATGACTCTGATGAAAGAGAC 59.670 45.833 8.16 2.83 45.59 3.36
2122 2214 4.222366 TGCATGACTCTGATGAAAGAGACT 59.778 41.667 8.16 0.00 45.59 3.24
2123 2215 5.420104 TGCATGACTCTGATGAAAGAGACTA 59.580 40.000 8.16 0.00 45.59 2.59
2124 2216 5.978919 GCATGACTCTGATGAAAGAGACTAG 59.021 44.000 8.16 0.00 45.59 2.57
2125 2217 6.183360 GCATGACTCTGATGAAAGAGACTAGA 60.183 42.308 8.16 0.00 45.59 2.43
2126 2218 6.751514 TGACTCTGATGAAAGAGACTAGAC 57.248 41.667 8.16 0.00 45.59 2.59
2127 2219 6.241645 TGACTCTGATGAAAGAGACTAGACA 58.758 40.000 8.16 0.00 45.59 3.41
2128 2220 6.374053 TGACTCTGATGAAAGAGACTAGACAG 59.626 42.308 8.16 0.00 45.59 3.51
2129 2221 6.245408 ACTCTGATGAAAGAGACTAGACAGT 58.755 40.000 8.16 0.00 45.59 3.55
2130 2222 6.150976 ACTCTGATGAAAGAGACTAGACAGTG 59.849 42.308 8.16 0.00 45.59 3.66
2131 2223 6.007076 TCTGATGAAAGAGACTAGACAGTGT 58.993 40.000 0.00 0.00 34.21 3.55
2132 2224 7.168905 TCTGATGAAAGAGACTAGACAGTGTA 58.831 38.462 0.00 0.00 34.21 2.90
2133 2225 7.831690 TCTGATGAAAGAGACTAGACAGTGTAT 59.168 37.037 0.00 0.00 34.21 2.29
2134 2226 7.766283 TGATGAAAGAGACTAGACAGTGTATG 58.234 38.462 0.00 0.00 34.21 2.39
2135 2227 5.955488 TGAAAGAGACTAGACAGTGTATGC 58.045 41.667 0.00 0.00 34.21 3.14
2136 2228 5.712446 TGAAAGAGACTAGACAGTGTATGCT 59.288 40.000 0.00 0.00 34.21 3.79
2137 2229 6.884836 TGAAAGAGACTAGACAGTGTATGCTA 59.115 38.462 0.00 0.00 34.21 3.49
2138 2230 7.558081 TGAAAGAGACTAGACAGTGTATGCTAT 59.442 37.037 0.00 0.00 34.21 2.97
2139 2231 8.982091 AAAGAGACTAGACAGTGTATGCTATA 57.018 34.615 0.00 0.00 34.21 1.31
2140 2232 8.615878 AAGAGACTAGACAGTGTATGCTATAG 57.384 38.462 0.00 0.00 34.21 1.31
2141 2233 7.741785 AGAGACTAGACAGTGTATGCTATAGT 58.258 38.462 0.00 0.00 34.21 2.12
2142 2234 7.876068 AGAGACTAGACAGTGTATGCTATAGTC 59.124 40.741 8.93 8.93 35.85 2.59
2143 2235 7.510407 AGACTAGACAGTGTATGCTATAGTCA 58.490 38.462 16.22 0.55 36.85 3.41
2144 2236 7.993758 AGACTAGACAGTGTATGCTATAGTCAA 59.006 37.037 16.22 0.00 36.85 3.18
2145 2237 8.698973 ACTAGACAGTGTATGCTATAGTCAAT 57.301 34.615 0.00 0.00 32.25 2.57
2146 2238 8.572185 ACTAGACAGTGTATGCTATAGTCAATG 58.428 37.037 0.00 8.05 32.25 2.82
2147 2239 6.219473 AGACAGTGTATGCTATAGTCAATGC 58.781 40.000 0.00 0.00 0.00 3.56
2148 2240 4.984785 ACAGTGTATGCTATAGTCAATGCG 59.015 41.667 0.00 0.00 0.00 4.73
2149 2241 5.221244 ACAGTGTATGCTATAGTCAATGCGA 60.221 40.000 0.00 0.00 0.00 5.10
2150 2242 5.117745 CAGTGTATGCTATAGTCAATGCGAC 59.882 44.000 0.84 0.00 45.77 5.19
2177 2269 4.947645 TGTTATACGTAACACCCTATGGC 58.052 43.478 0.00 0.00 43.86 4.40
2178 2270 4.650588 TGTTATACGTAACACCCTATGGCT 59.349 41.667 0.00 0.00 43.86 4.75
2179 2271 5.221303 TGTTATACGTAACACCCTATGGCTC 60.221 44.000 0.00 0.00 43.86 4.70
2180 2272 0.458669 ACGTAACACCCTATGGCTCG 59.541 55.000 0.00 0.00 33.59 5.03
2181 2273 0.742505 CGTAACACCCTATGGCTCGA 59.257 55.000 0.00 0.00 33.59 4.04
2182 2274 1.535437 CGTAACACCCTATGGCTCGAC 60.535 57.143 0.00 0.00 33.59 4.20
2183 2275 1.117150 TAACACCCTATGGCTCGACC 58.883 55.000 0.00 0.00 39.84 4.79
2184 2276 0.617820 AACACCCTATGGCTCGACCT 60.618 55.000 5.77 0.00 40.22 3.85
2185 2277 1.043673 ACACCCTATGGCTCGACCTC 61.044 60.000 5.77 0.00 40.22 3.85
2186 2278 0.757188 CACCCTATGGCTCGACCTCT 60.757 60.000 5.77 0.00 40.22 3.69
2187 2279 0.032017 ACCCTATGGCTCGACCTCTT 60.032 55.000 5.77 0.00 40.22 2.85
2188 2280 1.123928 CCCTATGGCTCGACCTCTTT 58.876 55.000 5.77 0.00 40.22 2.52
2189 2281 1.486726 CCCTATGGCTCGACCTCTTTT 59.513 52.381 5.77 0.00 40.22 2.27
2190 2282 2.555199 CCTATGGCTCGACCTCTTTTG 58.445 52.381 5.77 0.00 40.22 2.44
2191 2283 2.168521 CCTATGGCTCGACCTCTTTTGA 59.831 50.000 5.77 0.00 40.22 2.69
2192 2284 3.181461 CCTATGGCTCGACCTCTTTTGAT 60.181 47.826 5.77 0.00 40.22 2.57
2193 2285 4.039245 CCTATGGCTCGACCTCTTTTGATA 59.961 45.833 5.77 0.00 40.22 2.15
2194 2286 3.247006 TGGCTCGACCTCTTTTGATAC 57.753 47.619 5.77 0.00 40.22 2.24
2195 2287 2.093658 TGGCTCGACCTCTTTTGATACC 60.094 50.000 5.77 0.00 40.22 2.73
2196 2288 2.093658 GGCTCGACCTCTTTTGATACCA 60.094 50.000 0.00 0.00 34.51 3.25
2197 2289 3.432326 GGCTCGACCTCTTTTGATACCAT 60.432 47.826 0.00 0.00 34.51 3.55
2198 2290 4.202223 GGCTCGACCTCTTTTGATACCATA 60.202 45.833 0.00 0.00 34.51 2.74
2199 2291 5.511545 GGCTCGACCTCTTTTGATACCATAT 60.512 44.000 0.00 0.00 34.51 1.78
2200 2292 6.295123 GGCTCGACCTCTTTTGATACCATATA 60.295 42.308 0.00 0.00 34.51 0.86
2201 2293 7.152645 GCTCGACCTCTTTTGATACCATATAA 58.847 38.462 0.00 0.00 0.00 0.98
2202 2294 7.656137 GCTCGACCTCTTTTGATACCATATAAA 59.344 37.037 0.00 0.00 0.00 1.40
2203 2295 9.542462 CTCGACCTCTTTTGATACCATATAAAA 57.458 33.333 0.00 0.00 0.00 1.52
2204 2296 9.893634 TCGACCTCTTTTGATACCATATAAAAA 57.106 29.630 0.00 0.00 0.00 1.94
2228 2320 9.499479 AAATGTGTTTTATAATCAATGCAACCA 57.501 25.926 0.00 0.00 0.00 3.67
2229 2321 9.499479 AATGTGTTTTATAATCAATGCAACCAA 57.501 25.926 0.00 0.00 0.00 3.67
2230 2322 8.893219 TGTGTTTTATAATCAATGCAACCAAA 57.107 26.923 0.00 0.00 0.00 3.28
2231 2323 9.330063 TGTGTTTTATAATCAATGCAACCAAAA 57.670 25.926 0.00 0.00 0.00 2.44
2254 2346 6.748333 AAATCGATCTGATGAAAGAAAGCA 57.252 33.333 0.00 0.00 37.39 3.91
2255 2347 5.731599 ATCGATCTGATGAAAGAAAGCAC 57.268 39.130 0.00 0.00 35.45 4.40
2256 2348 4.568956 TCGATCTGATGAAAGAAAGCACA 58.431 39.130 0.00 0.00 0.00 4.57
2257 2349 5.181009 TCGATCTGATGAAAGAAAGCACAT 58.819 37.500 0.00 0.00 0.00 3.21
2258 2350 5.645067 TCGATCTGATGAAAGAAAGCACATT 59.355 36.000 0.00 0.00 0.00 2.71
2259 2351 6.818142 TCGATCTGATGAAAGAAAGCACATTA 59.182 34.615 0.00 0.00 0.00 1.90
2260 2352 7.496920 TCGATCTGATGAAAGAAAGCACATTAT 59.503 33.333 0.00 0.00 0.00 1.28
2261 2353 8.768019 CGATCTGATGAAAGAAAGCACATTATA 58.232 33.333 0.00 0.00 0.00 0.98
2301 2393 8.807667 AATGTTTTAAAGCATCTTCAACTCAG 57.192 30.769 16.62 0.00 0.00 3.35
2308 2400 2.787994 CATCTTCAACTCAGCTGGGTT 58.212 47.619 26.52 26.52 0.00 4.11
2312 2404 4.579869 TCTTCAACTCAGCTGGGTTAATC 58.420 43.478 30.90 0.00 0.00 1.75
2330 2422 6.183360 GGTTAATCTGGCCTCTTATTTGTTCC 60.183 42.308 3.32 0.00 0.00 3.62
2340 2432 7.040823 GGCCTCTTATTTGTTCCTAGATCAATG 60.041 40.741 0.00 0.00 0.00 2.82
2375 2467 1.747367 CCTCGACTGGAGACGCTCT 60.747 63.158 6.78 0.00 46.23 4.09
2385 2477 3.288092 TGGAGACGCTCTTAGCTCATAA 58.712 45.455 0.00 0.00 39.60 1.90
2386 2478 3.891977 TGGAGACGCTCTTAGCTCATAAT 59.108 43.478 0.00 0.00 39.60 1.28
2387 2479 5.070685 TGGAGACGCTCTTAGCTCATAATA 58.929 41.667 0.00 0.00 39.60 0.98
2388 2480 5.535030 TGGAGACGCTCTTAGCTCATAATAA 59.465 40.000 0.00 0.00 39.60 1.40
2389 2481 6.090129 GGAGACGCTCTTAGCTCATAATAAG 58.910 44.000 0.00 0.00 39.60 1.73
2390 2482 6.019779 AGACGCTCTTAGCTCATAATAAGG 57.980 41.667 0.00 0.00 39.60 2.69
2391 2483 5.770663 AGACGCTCTTAGCTCATAATAAGGA 59.229 40.000 0.00 0.00 39.60 3.36
2392 2484 5.774630 ACGCTCTTAGCTCATAATAAGGAC 58.225 41.667 0.00 0.00 39.60 3.85
2393 2485 4.854291 CGCTCTTAGCTCATAATAAGGACG 59.146 45.833 0.00 0.00 39.60 4.79
2394 2486 5.563085 CGCTCTTAGCTCATAATAAGGACGT 60.563 44.000 0.00 0.00 39.60 4.34
2395 2487 6.348295 CGCTCTTAGCTCATAATAAGGACGTA 60.348 42.308 0.00 0.00 39.60 3.57
2398 2490 9.915629 CTCTTAGCTCATAATAAGGACGTATTT 57.084 33.333 0.00 0.00 31.28 1.40
2410 2505 2.222953 GGACGTATTTTACTGCAAGCGG 60.223 50.000 0.00 0.00 37.60 5.52
2411 2506 1.129811 ACGTATTTTACTGCAAGCGGC 59.870 47.619 0.00 0.00 45.13 6.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
158 160 8.412608 TCACTCTATTTTGATCGATTCTTGTC 57.587 34.615 0.00 0.00 0.00 3.18
159 161 8.954950 ATCACTCTATTTTGATCGATTCTTGT 57.045 30.769 0.00 0.00 0.00 3.16
215 218 2.357637 TCGACTTCAGGGCAAAAACAAG 59.642 45.455 0.00 0.00 0.00 3.16
218 221 1.333791 CGTCGACTTCAGGGCAAAAAC 60.334 52.381 14.70 0.00 0.00 2.43
223 226 1.300620 CAACGTCGACTTCAGGGCA 60.301 57.895 14.70 0.00 0.00 5.36
225 228 0.249741 AACCAACGTCGACTTCAGGG 60.250 55.000 14.70 9.56 0.00 4.45
268 271 5.554822 AACTTGACTTTCGTTTGCACTAA 57.445 34.783 0.00 0.00 0.00 2.24
330 333 9.736023 CACCTCTTATGCCTTGTTTTTATAATC 57.264 33.333 0.00 0.00 0.00 1.75
337 340 6.010219 ACATACACCTCTTATGCCTTGTTTT 58.990 36.000 0.00 0.00 31.12 2.43
341 344 5.670485 TGTACATACACCTCTTATGCCTTG 58.330 41.667 0.00 0.00 31.12 3.61
355 358 4.359434 TTGCTTTCTGGGTGTACATACA 57.641 40.909 0.00 0.17 0.00 2.29
356 359 4.156008 CCTTTGCTTTCTGGGTGTACATAC 59.844 45.833 0.00 0.00 0.00 2.39
360 364 1.886542 CCCTTTGCTTTCTGGGTGTAC 59.113 52.381 0.00 0.00 35.13 2.90
456 463 6.160684 ACAACGACTACATGCACTAACATTA 58.839 36.000 0.00 0.00 0.00 1.90
457 464 4.994852 ACAACGACTACATGCACTAACATT 59.005 37.500 0.00 0.00 0.00 2.71
465 472 3.322369 CACCTAACAACGACTACATGCA 58.678 45.455 0.00 0.00 0.00 3.96
466 473 2.093783 GCACCTAACAACGACTACATGC 59.906 50.000 0.00 0.00 0.00 4.06
467 474 3.585862 AGCACCTAACAACGACTACATG 58.414 45.455 0.00 0.00 0.00 3.21
468 475 3.510360 AGAGCACCTAACAACGACTACAT 59.490 43.478 0.00 0.00 0.00 2.29
469 476 2.889045 AGAGCACCTAACAACGACTACA 59.111 45.455 0.00 0.00 0.00 2.74
470 477 3.243336 CAGAGCACCTAACAACGACTAC 58.757 50.000 0.00 0.00 0.00 2.73
471 478 2.352421 GCAGAGCACCTAACAACGACTA 60.352 50.000 0.00 0.00 0.00 2.59
472 479 1.605712 GCAGAGCACCTAACAACGACT 60.606 52.381 0.00 0.00 0.00 4.18
473 480 0.790814 GCAGAGCACCTAACAACGAC 59.209 55.000 0.00 0.00 0.00 4.34
474 481 0.666274 CGCAGAGCACCTAACAACGA 60.666 55.000 0.00 0.00 0.00 3.85
475 482 1.626654 CCGCAGAGCACCTAACAACG 61.627 60.000 0.00 0.00 0.00 4.10
476 483 0.320421 TCCGCAGAGCACCTAACAAC 60.320 55.000 0.00 0.00 0.00 3.32
477 484 0.613260 ATCCGCAGAGCACCTAACAA 59.387 50.000 0.00 0.00 0.00 2.83
478 485 0.175760 GATCCGCAGAGCACCTAACA 59.824 55.000 0.00 0.00 0.00 2.41
479 486 0.461961 AGATCCGCAGAGCACCTAAC 59.538 55.000 0.00 0.00 0.00 2.34
480 487 0.461548 CAGATCCGCAGAGCACCTAA 59.538 55.000 0.00 0.00 0.00 2.69
481 488 0.395724 TCAGATCCGCAGAGCACCTA 60.396 55.000 0.00 0.00 0.00 3.08
482 489 1.260538 TTCAGATCCGCAGAGCACCT 61.261 55.000 0.00 0.00 0.00 4.00
483 490 0.179062 ATTCAGATCCGCAGAGCACC 60.179 55.000 0.00 0.00 0.00 5.01
484 491 0.935898 CATTCAGATCCGCAGAGCAC 59.064 55.000 0.00 0.00 0.00 4.40
485 492 0.538584 ACATTCAGATCCGCAGAGCA 59.461 50.000 0.00 0.00 0.00 4.26
486 493 2.515926 TACATTCAGATCCGCAGAGC 57.484 50.000 0.00 0.00 0.00 4.09
487 494 5.998454 AAATTACATTCAGATCCGCAGAG 57.002 39.130 0.00 0.00 0.00 3.35
488 495 6.757897 AAAAATTACATTCAGATCCGCAGA 57.242 33.333 0.00 0.00 0.00 4.26
536 543 9.872684 ACCTATTTATTCATCTTCAATCATGGT 57.127 29.630 0.00 0.00 0.00 3.55
540 547 8.632679 GCCAACCTATTTATTCATCTTCAATCA 58.367 33.333 0.00 0.00 0.00 2.57
541 548 8.854117 AGCCAACCTATTTATTCATCTTCAATC 58.146 33.333 0.00 0.00 0.00 2.67
542 549 8.773033 AGCCAACCTATTTATTCATCTTCAAT 57.227 30.769 0.00 0.00 0.00 2.57
543 550 8.593945 AAGCCAACCTATTTATTCATCTTCAA 57.406 30.769 0.00 0.00 0.00 2.69
544 551 8.469200 CAAAGCCAACCTATTTATTCATCTTCA 58.531 33.333 0.00 0.00 0.00 3.02
545 552 8.470002 ACAAAGCCAACCTATTTATTCATCTTC 58.530 33.333 0.00 0.00 0.00 2.87
546 553 8.366359 ACAAAGCCAACCTATTTATTCATCTT 57.634 30.769 0.00 0.00 0.00 2.40
547 554 7.961326 ACAAAGCCAACCTATTTATTCATCT 57.039 32.000 0.00 0.00 0.00 2.90
550 557 9.914834 ACTATACAAAGCCAACCTATTTATTCA 57.085 29.630 0.00 0.00 0.00 2.57
552 559 9.914834 TGACTATACAAAGCCAACCTATTTATT 57.085 29.630 0.00 0.00 0.00 1.40
557 564 9.507329 CAATATGACTATACAAAGCCAACCTAT 57.493 33.333 0.00 0.00 0.00 2.57
558 565 8.710239 TCAATATGACTATACAAAGCCAACCTA 58.290 33.333 0.00 0.00 0.00 3.08
559 566 7.573710 TCAATATGACTATACAAAGCCAACCT 58.426 34.615 0.00 0.00 0.00 3.50
560 567 7.715249 TCTCAATATGACTATACAAAGCCAACC 59.285 37.037 0.00 0.00 0.00 3.77
561 568 8.662781 TCTCAATATGACTATACAAAGCCAAC 57.337 34.615 0.00 0.00 0.00 3.77
562 569 9.851686 ATTCTCAATATGACTATACAAAGCCAA 57.148 29.630 0.00 0.00 0.00 4.52
563 570 9.276590 CATTCTCAATATGACTATACAAAGCCA 57.723 33.333 0.00 0.00 0.00 4.75
564 571 8.233190 GCATTCTCAATATGACTATACAAAGCC 58.767 37.037 0.00 0.00 0.00 4.35
565 572 7.954248 CGCATTCTCAATATGACTATACAAAGC 59.046 37.037 0.00 0.00 0.00 3.51
566 573 9.196552 TCGCATTCTCAATATGACTATACAAAG 57.803 33.333 0.00 0.00 0.00 2.77
567 574 8.978539 GTCGCATTCTCAATATGACTATACAAA 58.021 33.333 0.00 0.00 0.00 2.83
568 575 8.360390 AGTCGCATTCTCAATATGACTATACAA 58.640 33.333 0.00 0.00 34.62 2.41
569 576 7.809806 CAGTCGCATTCTCAATATGACTATACA 59.190 37.037 0.00 0.00 34.62 2.29
570 577 8.023706 TCAGTCGCATTCTCAATATGACTATAC 58.976 37.037 0.00 0.00 34.62 1.47
571 578 8.110860 TCAGTCGCATTCTCAATATGACTATA 57.889 34.615 0.00 0.00 34.62 1.31
572 579 6.986250 TCAGTCGCATTCTCAATATGACTAT 58.014 36.000 0.00 0.00 34.62 2.12
573 580 6.391227 TCAGTCGCATTCTCAATATGACTA 57.609 37.500 0.00 0.00 34.62 2.59
574 581 5.268118 TCAGTCGCATTCTCAATATGACT 57.732 39.130 0.00 0.00 35.91 3.41
575 582 5.464722 ACATCAGTCGCATTCTCAATATGAC 59.535 40.000 0.00 0.00 0.00 3.06
576 583 5.604565 ACATCAGTCGCATTCTCAATATGA 58.395 37.500 0.00 0.00 0.00 2.15
577 584 5.919272 ACATCAGTCGCATTCTCAATATG 57.081 39.130 0.00 0.00 0.00 1.78
578 585 6.592994 CCATACATCAGTCGCATTCTCAATAT 59.407 38.462 0.00 0.00 0.00 1.28
579 586 5.928264 CCATACATCAGTCGCATTCTCAATA 59.072 40.000 0.00 0.00 0.00 1.90
580 587 4.753610 CCATACATCAGTCGCATTCTCAAT 59.246 41.667 0.00 0.00 0.00 2.57
581 588 4.122046 CCATACATCAGTCGCATTCTCAA 58.878 43.478 0.00 0.00 0.00 3.02
582 589 3.721035 CCATACATCAGTCGCATTCTCA 58.279 45.455 0.00 0.00 0.00 3.27
583 590 2.478134 GCCATACATCAGTCGCATTCTC 59.522 50.000 0.00 0.00 0.00 2.87
584 591 2.103771 AGCCATACATCAGTCGCATTCT 59.896 45.455 0.00 0.00 0.00 2.40
585 592 2.487934 AGCCATACATCAGTCGCATTC 58.512 47.619 0.00 0.00 0.00 2.67
586 593 2.627515 AGCCATACATCAGTCGCATT 57.372 45.000 0.00 0.00 0.00 3.56
587 594 2.893489 TCTAGCCATACATCAGTCGCAT 59.107 45.455 0.00 0.00 0.00 4.73
588 595 2.306847 TCTAGCCATACATCAGTCGCA 58.693 47.619 0.00 0.00 0.00 5.10
589 596 3.506810 GATCTAGCCATACATCAGTCGC 58.493 50.000 0.00 0.00 0.00 5.19
590 597 3.189495 ACGATCTAGCCATACATCAGTCG 59.811 47.826 0.00 0.00 0.00 4.18
591 598 4.480541 CACGATCTAGCCATACATCAGTC 58.519 47.826 0.00 0.00 0.00 3.51
592 599 3.256879 CCACGATCTAGCCATACATCAGT 59.743 47.826 0.00 0.00 0.00 3.41
593 600 3.507622 TCCACGATCTAGCCATACATCAG 59.492 47.826 0.00 0.00 0.00 2.90
594 601 3.496331 TCCACGATCTAGCCATACATCA 58.504 45.455 0.00 0.00 0.00 3.07
595 602 4.158579 TCATCCACGATCTAGCCATACATC 59.841 45.833 0.00 0.00 0.00 3.06
596 603 4.081972 GTCATCCACGATCTAGCCATACAT 60.082 45.833 0.00 0.00 0.00 2.29
597 604 3.255888 GTCATCCACGATCTAGCCATACA 59.744 47.826 0.00 0.00 0.00 2.29
598 605 3.367498 GGTCATCCACGATCTAGCCATAC 60.367 52.174 0.00 0.00 0.00 2.39
599 606 2.826128 GGTCATCCACGATCTAGCCATA 59.174 50.000 0.00 0.00 0.00 2.74
600 607 1.620819 GGTCATCCACGATCTAGCCAT 59.379 52.381 0.00 0.00 0.00 4.40
601 608 1.040646 GGTCATCCACGATCTAGCCA 58.959 55.000 0.00 0.00 0.00 4.75
602 609 0.039074 CGGTCATCCACGATCTAGCC 60.039 60.000 0.00 0.00 0.00 3.93
603 610 0.669077 ACGGTCATCCACGATCTAGC 59.331 55.000 0.00 0.00 0.00 3.42
604 611 1.600663 GCACGGTCATCCACGATCTAG 60.601 57.143 0.00 0.00 0.00 2.43
605 612 0.384309 GCACGGTCATCCACGATCTA 59.616 55.000 0.00 0.00 0.00 1.98
606 613 1.141881 GCACGGTCATCCACGATCT 59.858 57.895 0.00 0.00 0.00 2.75
607 614 0.530650 ATGCACGGTCATCCACGATC 60.531 55.000 0.00 0.00 0.00 3.69
608 615 0.750249 TATGCACGGTCATCCACGAT 59.250 50.000 0.00 0.00 0.00 3.73
609 616 0.102300 CTATGCACGGTCATCCACGA 59.898 55.000 0.00 0.00 0.00 4.35
610 617 0.179111 ACTATGCACGGTCATCCACG 60.179 55.000 0.00 0.00 0.00 4.94
611 618 1.290203 CACTATGCACGGTCATCCAC 58.710 55.000 0.00 0.00 0.00 4.02
612 619 0.177836 CCACTATGCACGGTCATCCA 59.822 55.000 0.00 0.00 0.00 3.41
613 620 0.464036 TCCACTATGCACGGTCATCC 59.536 55.000 0.00 0.00 0.00 3.51
614 621 2.309528 TTCCACTATGCACGGTCATC 57.690 50.000 0.00 0.00 0.00 2.92
615 622 4.415881 TTATTCCACTATGCACGGTCAT 57.584 40.909 0.00 0.00 0.00 3.06
616 623 3.897141 TTATTCCACTATGCACGGTCA 57.103 42.857 0.00 0.00 0.00 4.02
617 624 4.189231 AGTTTATTCCACTATGCACGGTC 58.811 43.478 0.00 0.00 0.00 4.79
618 625 4.081087 AGAGTTTATTCCACTATGCACGGT 60.081 41.667 0.00 0.00 0.00 4.83
619 626 4.442706 AGAGTTTATTCCACTATGCACGG 58.557 43.478 0.00 0.00 0.00 4.94
620 627 6.422776 AAAGAGTTTATTCCACTATGCACG 57.577 37.500 0.00 0.00 0.00 5.34
621 628 7.553044 AGGTAAAGAGTTTATTCCACTATGCAC 59.447 37.037 0.00 0.00 0.00 4.57
622 629 7.630082 AGGTAAAGAGTTTATTCCACTATGCA 58.370 34.615 0.00 0.00 0.00 3.96
623 630 8.507524 AAGGTAAAGAGTTTATTCCACTATGC 57.492 34.615 0.00 0.00 0.00 3.14
666 673 7.277098 CCTCCGTCTCAAGATACGATTTAAAAA 59.723 37.037 9.21 0.00 41.55 1.94
667 674 6.755141 CCTCCGTCTCAAGATACGATTTAAAA 59.245 38.462 9.21 0.00 41.55 1.52
668 675 6.270815 CCTCCGTCTCAAGATACGATTTAAA 58.729 40.000 9.21 0.00 41.55 1.52
669 676 5.221185 CCCTCCGTCTCAAGATACGATTTAA 60.221 44.000 9.21 0.00 41.55 1.52
670 677 4.277672 CCCTCCGTCTCAAGATACGATTTA 59.722 45.833 9.21 0.00 41.55 1.40
671 678 3.068307 CCCTCCGTCTCAAGATACGATTT 59.932 47.826 9.21 0.00 41.55 2.17
672 679 2.623889 CCCTCCGTCTCAAGATACGATT 59.376 50.000 9.21 0.00 41.55 3.34
676 683 2.657143 ACTCCCTCCGTCTCAAGATAC 58.343 52.381 0.00 0.00 0.00 2.24
722 729 8.968969 GGACGTAGGGAATAGTTATTCTATCAT 58.031 37.037 10.71 0.00 41.33 2.45
723 730 7.395489 GGGACGTAGGGAATAGTTATTCTATCA 59.605 40.741 10.71 0.00 41.33 2.15
724 731 7.395489 TGGGACGTAGGGAATAGTTATTCTATC 59.605 40.741 10.71 3.40 41.33 2.08
725 732 7.178097 GTGGGACGTAGGGAATAGTTATTCTAT 59.822 40.741 10.71 4.15 41.33 1.98
726 733 6.491403 GTGGGACGTAGGGAATAGTTATTCTA 59.509 42.308 10.71 0.00 41.33 2.10
727 734 5.303845 GTGGGACGTAGGGAATAGTTATTCT 59.696 44.000 10.71 0.00 41.33 2.40
728 735 5.069516 TGTGGGACGTAGGGAATAGTTATTC 59.930 44.000 3.75 3.75 40.96 1.75
729 736 4.964262 TGTGGGACGTAGGGAATAGTTATT 59.036 41.667 0.00 0.00 0.00 1.40
730 737 4.549668 TGTGGGACGTAGGGAATAGTTAT 58.450 43.478 0.00 0.00 0.00 1.89
731 738 3.979911 TGTGGGACGTAGGGAATAGTTA 58.020 45.455 0.00 0.00 0.00 2.24
732 739 2.823959 TGTGGGACGTAGGGAATAGTT 58.176 47.619 0.00 0.00 0.00 2.24
733 740 2.537633 TGTGGGACGTAGGGAATAGT 57.462 50.000 0.00 0.00 0.00 2.12
734 741 4.417426 AATTGTGGGACGTAGGGAATAG 57.583 45.455 0.00 0.00 0.00 1.73
735 742 4.847990 AAATTGTGGGACGTAGGGAATA 57.152 40.909 0.00 0.00 0.00 1.75
736 743 3.732048 AAATTGTGGGACGTAGGGAAT 57.268 42.857 0.00 0.00 0.00 3.01
737 744 3.512219 AAAATTGTGGGACGTAGGGAA 57.488 42.857 0.00 0.00 0.00 3.97
738 745 3.512219 AAAAATTGTGGGACGTAGGGA 57.488 42.857 0.00 0.00 0.00 4.20
757 764 9.877178 TTTCAAGCTTAACATAGTTTGGAAAAA 57.123 25.926 0.00 0.00 37.09 1.94
758 765 9.877178 TTTTCAAGCTTAACATAGTTTGGAAAA 57.123 25.926 0.00 3.87 39.42 2.29
759 766 9.877178 TTTTTCAAGCTTAACATAGTTTGGAAA 57.123 25.926 0.00 0.00 40.12 3.13
783 790 5.934625 CCCTCCGAATCGAGATATGATTTTT 59.065 40.000 3.36 0.00 36.24 1.94
784 791 5.246203 TCCCTCCGAATCGAGATATGATTTT 59.754 40.000 3.36 0.00 36.24 1.82
785 792 4.772624 TCCCTCCGAATCGAGATATGATTT 59.227 41.667 3.36 0.00 36.24 2.17
786 793 4.344978 TCCCTCCGAATCGAGATATGATT 58.655 43.478 3.36 0.00 38.71 2.57
787 794 3.951037 CTCCCTCCGAATCGAGATATGAT 59.049 47.826 3.36 0.00 30.97 2.45
788 795 3.348119 CTCCCTCCGAATCGAGATATGA 58.652 50.000 3.36 0.00 30.97 2.15
789 796 2.425312 CCTCCCTCCGAATCGAGATATG 59.575 54.545 3.36 0.00 30.97 1.78
790 797 2.309162 TCCTCCCTCCGAATCGAGATAT 59.691 50.000 3.36 0.00 30.97 1.63
791 798 1.703513 TCCTCCCTCCGAATCGAGATA 59.296 52.381 3.36 0.00 30.97 1.98
792 799 0.478942 TCCTCCCTCCGAATCGAGAT 59.521 55.000 3.36 0.00 30.97 2.75
793 800 0.179015 CTCCTCCCTCCGAATCGAGA 60.179 60.000 3.36 0.00 30.97 4.04
794 801 1.801309 GCTCCTCCCTCCGAATCGAG 61.801 65.000 3.36 0.00 0.00 4.04
795 802 1.828660 GCTCCTCCCTCCGAATCGA 60.829 63.158 3.36 0.00 0.00 3.59
796 803 2.731374 GCTCCTCCCTCCGAATCG 59.269 66.667 0.00 0.00 0.00 3.34
797 804 2.731374 CGCTCCTCCCTCCGAATC 59.269 66.667 0.00 0.00 0.00 2.52
798 805 2.642183 TAGCGCTCCTCCCTCCGAAT 62.642 60.000 16.34 0.00 0.00 3.34
799 806 3.354472 TAGCGCTCCTCCCTCCGAA 62.354 63.158 16.34 0.00 0.00 4.30
800 807 3.776347 CTAGCGCTCCTCCCTCCGA 62.776 68.421 16.34 0.00 0.00 4.55
801 808 3.291383 CTAGCGCTCCTCCCTCCG 61.291 72.222 16.34 0.00 0.00 4.63
802 809 3.611674 GCTAGCGCTCCTCCCTCC 61.612 72.222 16.34 0.00 0.00 4.30
803 810 2.835431 TGCTAGCGCTCCTCCCTC 60.835 66.667 16.34 0.00 36.97 4.30
804 811 2.837291 CTGCTAGCGCTCCTCCCT 60.837 66.667 16.34 0.00 36.97 4.20
805 812 2.835431 TCTGCTAGCGCTCCTCCC 60.835 66.667 16.34 0.00 36.97 4.30
806 813 2.415426 GTCTGCTAGCGCTCCTCC 59.585 66.667 16.34 0.70 36.97 4.30
807 814 2.025441 CGTCTGCTAGCGCTCCTC 59.975 66.667 16.34 4.64 36.97 3.71
814 821 3.854459 GTTGCGGCGTCTGCTAGC 61.854 66.667 8.10 8.10 42.25 3.42
815 822 1.361668 ATTGTTGCGGCGTCTGCTAG 61.362 55.000 9.37 0.00 42.25 3.42
816 823 1.358725 GATTGTTGCGGCGTCTGCTA 61.359 55.000 9.37 2.21 42.25 3.49
817 824 2.669569 ATTGTTGCGGCGTCTGCT 60.670 55.556 9.37 0.00 42.25 4.24
886 902 2.296943 TTTATAGGCCCAGGGAAGGT 57.703 50.000 10.89 0.00 0.00 3.50
896 912 3.070590 ACTGTGACGGGTATTTATAGGCC 59.929 47.826 0.00 0.00 0.00 5.19
911 927 2.876550 GTGGTTTAAGGGTCACTGTGAC 59.123 50.000 28.29 28.29 46.23 3.67
921 937 3.702045 TGGTTTGAGTTGTGGTTTAAGGG 59.298 43.478 0.00 0.00 0.00 3.95
931 947 0.467290 ATGCCGGTGGTTTGAGTTGT 60.467 50.000 1.90 0.00 0.00 3.32
1325 1341 4.720902 TGGGCATGTGCGACTGGG 62.721 66.667 0.00 0.00 43.26 4.45
1504 1520 6.412362 TGCAAACTTATTAAACACACCCAT 57.588 33.333 0.00 0.00 0.00 4.00
1539 1555 2.215907 AGCAGCTGCAATACGACTAG 57.784 50.000 38.24 0.00 45.16 2.57
1628 1653 0.041312 GTCACACATTCACCACGCAC 60.041 55.000 0.00 0.00 0.00 5.34
1646 1672 4.627467 GCACGACAATGAAACATCTCTAGT 59.373 41.667 0.00 0.00 0.00 2.57
1696 1722 0.463116 ACAACACACCAAGGACGGAC 60.463 55.000 0.00 0.00 0.00 4.79
1703 1729 2.487762 AGAACACACACAACACACCAAG 59.512 45.455 0.00 0.00 0.00 3.61
1730 1756 7.611770 ACCCAGCCAAATTTTAAAGTAGATTC 58.388 34.615 0.00 0.00 0.00 2.52
1736 1764 5.512921 CCATGACCCAGCCAAATTTTAAAGT 60.513 40.000 0.00 0.00 0.00 2.66
1737 1765 4.937015 CCATGACCCAGCCAAATTTTAAAG 59.063 41.667 0.00 0.00 0.00 1.85
1807 1835 1.078497 CCCTTAGCGTGGATGCACA 60.078 57.895 18.05 0.00 37.31 4.57
1814 1842 0.323629 TGTTTCTCCCCTTAGCGTGG 59.676 55.000 0.00 0.00 0.00 4.94
1824 1852 1.133025 CCATGCACGAATGTTTCTCCC 59.867 52.381 0.00 0.00 0.00 4.30
1859 1895 2.443958 TCATCCATCACGAGGAGAGT 57.556 50.000 0.00 0.00 38.83 3.24
1905 1996 3.493767 ACCTCTGTTTGTTCCTCTTCC 57.506 47.619 0.00 0.00 0.00 3.46
1912 2003 5.036737 CACATTGACAACCTCTGTTTGTTC 58.963 41.667 0.00 0.00 38.84 3.18
1914 2005 4.269183 TCACATTGACAACCTCTGTTTGT 58.731 39.130 0.00 0.00 38.84 2.83
1916 2007 4.202050 GCTTCACATTGACAACCTCTGTTT 60.202 41.667 0.00 0.00 38.84 2.83
1932 2024 0.322975 GCTCTCTCTTGGGCTTCACA 59.677 55.000 0.00 0.00 0.00 3.58
1938 2030 1.122227 ATCTCAGCTCTCTCTTGGGC 58.878 55.000 0.00 0.00 0.00 5.36
1942 2034 9.985730 CATTTAGATTTATCTCAGCTCTCTCTT 57.014 33.333 0.00 0.00 38.32 2.85
1958 2050 9.289303 GCACGAATGTTTACATCATTTAGATTT 57.711 29.630 0.00 0.00 35.94 2.17
1961 2053 7.371126 TGCACGAATGTTTACATCATTTAGA 57.629 32.000 0.00 0.00 35.94 2.10
1962 2054 7.166307 CCATGCACGAATGTTTACATCATTTAG 59.834 37.037 0.00 0.00 35.94 1.85
1963 2055 6.971756 CCATGCACGAATGTTTACATCATTTA 59.028 34.615 0.00 0.00 35.94 1.40
1964 2056 5.806502 CCATGCACGAATGTTTACATCATTT 59.193 36.000 0.00 0.00 35.94 2.32
1965 2057 5.342433 CCATGCACGAATGTTTACATCATT 58.658 37.500 0.00 0.00 38.08 2.57
1966 2058 4.734402 GCCATGCACGAATGTTTACATCAT 60.734 41.667 0.00 0.00 35.10 2.45
1967 2059 3.427368 GCCATGCACGAATGTTTACATCA 60.427 43.478 0.00 0.00 35.10 3.07
1968 2060 3.108144 GCCATGCACGAATGTTTACATC 58.892 45.455 0.00 0.00 35.10 3.06
1969 2061 2.159254 GGCCATGCACGAATGTTTACAT 60.159 45.455 0.00 0.00 38.41 2.29
1970 2062 1.201181 GGCCATGCACGAATGTTTACA 59.799 47.619 0.00 0.00 0.00 2.41
1971 2063 1.793714 CGGCCATGCACGAATGTTTAC 60.794 52.381 2.24 0.00 0.00 2.01
1972 2064 0.449786 CGGCCATGCACGAATGTTTA 59.550 50.000 2.24 0.00 0.00 2.01
1973 2065 1.212490 CGGCCATGCACGAATGTTT 59.788 52.632 2.24 0.00 0.00 2.83
1974 2066 2.876955 CGGCCATGCACGAATGTT 59.123 55.556 2.24 0.00 0.00 2.71
1975 2067 3.814268 GCGGCCATGCACGAATGT 61.814 61.111 2.24 0.00 34.15 2.71
1976 2068 3.813143 TGCGGCCATGCACGAATG 61.813 61.111 2.24 0.00 40.62 2.67
1989 2081 3.944250 AAAGGGAGGGCATGTGCGG 62.944 63.158 0.00 0.00 43.26 5.69
1990 2082 2.361610 AAAGGGAGGGCATGTGCG 60.362 61.111 0.00 0.00 43.26 5.34
1991 2083 2.054453 GGAAAGGGAGGGCATGTGC 61.054 63.158 0.00 0.00 41.14 4.57
1992 2084 0.394899 GAGGAAAGGGAGGGCATGTG 60.395 60.000 0.00 0.00 0.00 3.21
1993 2085 1.915078 CGAGGAAAGGGAGGGCATGT 61.915 60.000 0.00 0.00 0.00 3.21
1994 2086 1.153086 CGAGGAAAGGGAGGGCATG 60.153 63.158 0.00 0.00 0.00 4.06
1995 2087 1.616628 ACGAGGAAAGGGAGGGCAT 60.617 57.895 0.00 0.00 0.00 4.40
1996 2088 2.203938 ACGAGGAAAGGGAGGGCA 60.204 61.111 0.00 0.00 0.00 5.36
1997 2089 2.269241 CACGAGGAAAGGGAGGGC 59.731 66.667 0.00 0.00 0.00 5.19
1998 2090 1.296715 CACACGAGGAAAGGGAGGG 59.703 63.158 0.00 0.00 0.00 4.30
1999 2091 1.192146 TCCACACGAGGAAAGGGAGG 61.192 60.000 0.00 0.00 33.93 4.30
2000 2092 0.685097 TTCCACACGAGGAAAGGGAG 59.315 55.000 6.34 0.00 44.38 4.30
2001 2093 2.842994 TTCCACACGAGGAAAGGGA 58.157 52.632 6.34 0.00 44.38 4.20
2006 2098 1.124780 TCTTGGTTCCACACGAGGAA 58.875 50.000 4.98 4.98 45.12 3.36
2007 2099 1.348064 ATCTTGGTTCCACACGAGGA 58.652 50.000 0.00 0.00 35.41 3.71
2008 2100 2.185004 AATCTTGGTTCCACACGAGG 57.815 50.000 0.00 0.00 0.00 4.63
2009 2101 6.986817 AGATATTAATCTTGGTTCCACACGAG 59.013 38.462 0.00 0.00 39.55 4.18
2010 2102 6.884832 AGATATTAATCTTGGTTCCACACGA 58.115 36.000 0.00 0.00 39.55 4.35
2011 2103 6.202954 GGAGATATTAATCTTGGTTCCACACG 59.797 42.308 0.00 0.00 42.73 4.49
2012 2104 6.202954 CGGAGATATTAATCTTGGTTCCACAC 59.797 42.308 0.00 0.00 42.73 3.82
2021 2113 3.369147 CGCTGCCGGAGATATTAATCTTG 59.631 47.826 5.05 0.00 42.73 3.02
2031 2123 2.055042 AGTTCTCGCTGCCGGAGAT 61.055 57.895 5.05 0.00 34.56 2.75
2042 2134 3.838120 TGTGCATAGTTCTCAGTTCTCG 58.162 45.455 0.00 0.00 0.00 4.04
2043 2135 5.347364 GTCTTGTGCATAGTTCTCAGTTCTC 59.653 44.000 0.00 0.00 0.00 2.87
2044 2136 5.221521 TGTCTTGTGCATAGTTCTCAGTTCT 60.222 40.000 0.00 0.00 0.00 3.01
2045 2137 4.991056 TGTCTTGTGCATAGTTCTCAGTTC 59.009 41.667 0.00 0.00 0.00 3.01
2046 2138 4.960938 TGTCTTGTGCATAGTTCTCAGTT 58.039 39.130 0.00 0.00 0.00 3.16
2047 2139 4.281941 TCTGTCTTGTGCATAGTTCTCAGT 59.718 41.667 0.00 0.00 0.00 3.41
2048 2140 4.814147 TCTGTCTTGTGCATAGTTCTCAG 58.186 43.478 0.00 0.00 0.00 3.35
2075 2167 4.465632 TCTAAAAATAGACAGCGGCTGA 57.534 40.909 34.70 14.57 35.18 4.26
2086 2178 8.484641 TCAGAGTCATGCACTTCTAAAAATAG 57.515 34.615 0.00 0.00 34.41 1.73
2087 2179 8.886719 CATCAGAGTCATGCACTTCTAAAAATA 58.113 33.333 0.00 0.00 34.41 1.40
2088 2180 7.609146 TCATCAGAGTCATGCACTTCTAAAAAT 59.391 33.333 0.00 0.00 34.41 1.82
2089 2181 6.936335 TCATCAGAGTCATGCACTTCTAAAAA 59.064 34.615 0.00 0.00 34.41 1.94
2090 2182 6.466812 TCATCAGAGTCATGCACTTCTAAAA 58.533 36.000 0.00 0.00 34.41 1.52
2091 2183 6.041423 TCATCAGAGTCATGCACTTCTAAA 57.959 37.500 0.00 0.00 34.41 1.85
2092 2184 5.665916 TCATCAGAGTCATGCACTTCTAA 57.334 39.130 0.00 0.00 34.41 2.10
2093 2185 5.665916 TTCATCAGAGTCATGCACTTCTA 57.334 39.130 0.00 0.00 34.41 2.10
2094 2186 4.548451 TTCATCAGAGTCATGCACTTCT 57.452 40.909 0.00 0.00 34.41 2.85
2095 2187 4.934001 TCTTTCATCAGAGTCATGCACTTC 59.066 41.667 0.00 0.00 34.41 3.01
2096 2188 4.903054 TCTTTCATCAGAGTCATGCACTT 58.097 39.130 0.00 0.00 34.41 3.16
2097 2189 4.222366 TCTCTTTCATCAGAGTCATGCACT 59.778 41.667 0.00 0.00 41.18 4.40
2098 2190 4.329528 GTCTCTTTCATCAGAGTCATGCAC 59.670 45.833 0.00 0.00 41.18 4.57
2099 2191 4.222366 AGTCTCTTTCATCAGAGTCATGCA 59.778 41.667 0.00 0.00 41.18 3.96
2100 2192 4.757594 AGTCTCTTTCATCAGAGTCATGC 58.242 43.478 0.00 0.00 41.18 4.06
2101 2193 7.148103 TGTCTAGTCTCTTTCATCAGAGTCATG 60.148 40.741 0.00 0.00 41.18 3.07
2102 2194 6.889177 TGTCTAGTCTCTTTCATCAGAGTCAT 59.111 38.462 0.00 0.00 41.18 3.06
2103 2195 6.241645 TGTCTAGTCTCTTTCATCAGAGTCA 58.758 40.000 0.00 0.00 41.18 3.41
2104 2196 6.374333 ACTGTCTAGTCTCTTTCATCAGAGTC 59.626 42.308 0.00 0.00 41.18 3.36
2105 2197 6.150976 CACTGTCTAGTCTCTTTCATCAGAGT 59.849 42.308 0.00 0.00 41.18 3.24
2106 2198 6.150976 ACACTGTCTAGTCTCTTTCATCAGAG 59.849 42.308 0.00 0.00 41.69 3.35
2107 2199 6.007076 ACACTGTCTAGTCTCTTTCATCAGA 58.993 40.000 0.00 0.00 34.07 3.27
2108 2200 6.266168 ACACTGTCTAGTCTCTTTCATCAG 57.734 41.667 0.00 0.00 34.07 2.90
2109 2201 7.629437 GCATACACTGTCTAGTCTCTTTCATCA 60.629 40.741 0.00 0.00 34.07 3.07
2110 2202 6.695278 GCATACACTGTCTAGTCTCTTTCATC 59.305 42.308 0.00 0.00 34.07 2.92
2111 2203 6.379703 AGCATACACTGTCTAGTCTCTTTCAT 59.620 38.462 0.00 0.00 34.07 2.57
2112 2204 5.712446 AGCATACACTGTCTAGTCTCTTTCA 59.288 40.000 0.00 0.00 34.07 2.69
2113 2205 6.202516 AGCATACACTGTCTAGTCTCTTTC 57.797 41.667 0.00 0.00 34.07 2.62
2114 2206 7.889873 ATAGCATACACTGTCTAGTCTCTTT 57.110 36.000 0.00 0.00 34.07 2.52
2115 2207 8.215050 ACTATAGCATACACTGTCTAGTCTCTT 58.785 37.037 0.00 0.00 34.07 2.85
2116 2208 7.741785 ACTATAGCATACACTGTCTAGTCTCT 58.258 38.462 0.00 0.00 34.07 3.10
2117 2209 7.658167 TGACTATAGCATACACTGTCTAGTCTC 59.342 40.741 0.00 0.00 35.52 3.36
2118 2210 7.510407 TGACTATAGCATACACTGTCTAGTCT 58.490 38.462 0.00 0.00 35.52 3.24
2119 2211 7.731882 TGACTATAGCATACACTGTCTAGTC 57.268 40.000 0.00 0.00 34.07 2.59
2120 2212 8.572185 CATTGACTATAGCATACACTGTCTAGT 58.428 37.037 0.00 0.00 37.75 2.57
2121 2213 7.540400 GCATTGACTATAGCATACACTGTCTAG 59.460 40.741 0.00 0.00 0.00 2.43
2122 2214 7.371159 GCATTGACTATAGCATACACTGTCTA 58.629 38.462 0.00 0.00 0.00 2.59
2123 2215 6.219473 GCATTGACTATAGCATACACTGTCT 58.781 40.000 0.00 0.00 0.00 3.41
2124 2216 5.117745 CGCATTGACTATAGCATACACTGTC 59.882 44.000 0.00 0.00 0.00 3.51
2125 2217 4.984785 CGCATTGACTATAGCATACACTGT 59.015 41.667 0.00 0.00 0.00 3.55
2126 2218 5.117745 GTCGCATTGACTATAGCATACACTG 59.882 44.000 0.00 2.09 44.58 3.66
2127 2219 5.223382 GTCGCATTGACTATAGCATACACT 58.777 41.667 0.00 0.00 44.58 3.55
2128 2220 5.502214 GTCGCATTGACTATAGCATACAC 57.498 43.478 0.00 0.00 44.58 2.90
2129 2221 8.615240 TGCTGTCGCATTGACTATAGCATACA 62.615 42.308 0.00 0.00 44.53 2.29
2130 2222 6.300273 TGCTGTCGCATTGACTATAGCATAC 61.300 44.000 0.00 0.00 44.53 2.39
2131 2223 4.261994 TGCTGTCGCATTGACTATAGCATA 60.262 41.667 0.00 0.00 44.53 3.14
2132 2224 3.493176 TGCTGTCGCATTGACTATAGCAT 60.493 43.478 0.00 0.00 44.53 3.79
2133 2225 2.159114 TGCTGTCGCATTGACTATAGCA 60.159 45.455 0.00 4.92 46.13 3.49
2145 2237 3.548668 GTTACGTATAACATGCTGTCGCA 59.451 43.478 0.00 0.00 41.18 5.10
2146 2238 3.548668 TGTTACGTATAACATGCTGTCGC 59.451 43.478 0.00 0.00 44.62 5.19
2155 2247 4.650588 AGCCATAGGGTGTTACGTATAACA 59.349 41.667 0.00 0.00 40.62 2.41
2156 2248 5.205759 AGCCATAGGGTGTTACGTATAAC 57.794 43.478 0.00 0.00 36.92 1.89
2157 2249 4.022935 CGAGCCATAGGGTGTTACGTATAA 60.023 45.833 0.00 0.00 36.17 0.98
2158 2250 3.503363 CGAGCCATAGGGTGTTACGTATA 59.497 47.826 0.00 0.00 36.17 1.47
2159 2251 2.295349 CGAGCCATAGGGTGTTACGTAT 59.705 50.000 0.00 0.00 36.17 3.06
2160 2252 1.677576 CGAGCCATAGGGTGTTACGTA 59.322 52.381 0.00 0.00 36.17 3.57
2161 2253 0.458669 CGAGCCATAGGGTGTTACGT 59.541 55.000 0.00 0.00 36.17 3.57
2162 2254 0.742505 TCGAGCCATAGGGTGTTACG 59.257 55.000 0.00 0.00 36.17 3.18
2163 2255 1.202498 GGTCGAGCCATAGGGTGTTAC 60.202 57.143 2.39 0.00 37.17 2.50
2164 2256 1.117150 GGTCGAGCCATAGGGTGTTA 58.883 55.000 2.39 0.00 37.17 2.41
2165 2257 0.617820 AGGTCGAGCCATAGGGTGTT 60.618 55.000 11.73 0.00 40.61 3.32
2166 2258 1.001760 AGGTCGAGCCATAGGGTGT 59.998 57.895 11.73 0.00 40.61 4.16
2167 2259 0.757188 AGAGGTCGAGCCATAGGGTG 60.757 60.000 11.73 0.00 40.61 4.61
2168 2260 0.032017 AAGAGGTCGAGCCATAGGGT 60.032 55.000 11.73 0.00 40.61 4.34
2169 2261 1.123928 AAAGAGGTCGAGCCATAGGG 58.876 55.000 11.73 0.00 40.61 3.53
2170 2262 2.168521 TCAAAAGAGGTCGAGCCATAGG 59.831 50.000 11.73 0.00 40.61 2.57
2171 2263 3.526931 TCAAAAGAGGTCGAGCCATAG 57.473 47.619 11.73 0.00 40.61 2.23
2172 2264 4.202223 GGTATCAAAAGAGGTCGAGCCATA 60.202 45.833 11.73 0.00 40.61 2.74
2173 2265 3.432326 GGTATCAAAAGAGGTCGAGCCAT 60.432 47.826 11.73 0.00 40.61 4.40
2174 2266 2.093658 GGTATCAAAAGAGGTCGAGCCA 60.094 50.000 11.73 0.00 40.61 4.75
2175 2267 2.093658 TGGTATCAAAAGAGGTCGAGCC 60.094 50.000 11.73 3.31 37.58 4.70
2176 2268 3.247006 TGGTATCAAAAGAGGTCGAGC 57.753 47.619 6.48 6.48 0.00 5.03
2177 2269 9.542462 TTTTATATGGTATCAAAAGAGGTCGAG 57.458 33.333 0.00 0.00 0.00 4.04
2178 2270 9.893634 TTTTTATATGGTATCAAAAGAGGTCGA 57.106 29.630 0.00 0.00 0.00 4.20
2202 2294 9.499479 TGGTTGCATTGATTATAAAACACATTT 57.501 25.926 0.00 0.00 34.92 2.32
2203 2295 9.499479 TTGGTTGCATTGATTATAAAACACATT 57.501 25.926 0.00 0.00 0.00 2.71
2204 2296 9.499479 TTTGGTTGCATTGATTATAAAACACAT 57.501 25.926 0.00 0.00 0.00 3.21
2205 2297 8.893219 TTTGGTTGCATTGATTATAAAACACA 57.107 26.923 0.00 0.00 0.00 3.72
2229 2321 7.540055 GTGCTTTCTTTCATCAGATCGATTTTT 59.460 33.333 0.00 0.00 29.21 1.94
2230 2322 7.025963 GTGCTTTCTTTCATCAGATCGATTTT 58.974 34.615 0.00 0.00 29.21 1.82
2231 2323 6.149973 TGTGCTTTCTTTCATCAGATCGATTT 59.850 34.615 0.00 0.00 29.21 2.17
2232 2324 5.645067 TGTGCTTTCTTTCATCAGATCGATT 59.355 36.000 0.00 0.00 29.21 3.34
2233 2325 5.181009 TGTGCTTTCTTTCATCAGATCGAT 58.819 37.500 0.00 0.00 33.27 3.59
2234 2326 4.568956 TGTGCTTTCTTTCATCAGATCGA 58.431 39.130 0.00 0.00 0.00 3.59
2235 2327 4.934075 TGTGCTTTCTTTCATCAGATCG 57.066 40.909 0.00 0.00 0.00 3.69
2279 2371 6.361748 CAGCTGAGTTGAAGATGCTTTAAAAC 59.638 38.462 8.42 0.00 0.00 2.43
2282 2374 4.456911 CCAGCTGAGTTGAAGATGCTTTAA 59.543 41.667 17.39 0.00 29.62 1.52
2301 2393 0.548510 AGAGGCCAGATTAACCCAGC 59.451 55.000 5.01 0.00 0.00 4.85
2308 2400 6.327386 AGGAACAAATAAGAGGCCAGATTA 57.673 37.500 5.01 0.51 0.00 1.75
2312 2404 5.359194 TCTAGGAACAAATAAGAGGCCAG 57.641 43.478 5.01 0.00 0.00 4.85
2340 2432 4.271291 GTCGAGGCCTTCAAATCTTCATAC 59.729 45.833 6.77 0.00 0.00 2.39
2342 2434 3.054802 AGTCGAGGCCTTCAAATCTTCAT 60.055 43.478 6.77 0.00 0.00 2.57
2385 2477 5.006358 CGCTTGCAGTAAAATACGTCCTTAT 59.994 40.000 0.00 0.00 0.00 1.73
2386 2478 4.327898 CGCTTGCAGTAAAATACGTCCTTA 59.672 41.667 0.00 0.00 0.00 2.69
2387 2479 3.124636 CGCTTGCAGTAAAATACGTCCTT 59.875 43.478 0.00 0.00 0.00 3.36
2388 2480 2.671396 CGCTTGCAGTAAAATACGTCCT 59.329 45.455 0.00 0.00 0.00 3.85
2389 2481 2.222953 CCGCTTGCAGTAAAATACGTCC 60.223 50.000 0.00 0.00 0.00 4.79
2390 2482 2.786700 GCCGCTTGCAGTAAAATACGTC 60.787 50.000 0.00 0.00 40.77 4.34
2391 2483 1.129811 GCCGCTTGCAGTAAAATACGT 59.870 47.619 0.00 0.00 40.77 3.57
2392 2484 1.810197 GCCGCTTGCAGTAAAATACG 58.190 50.000 0.00 0.00 40.77 3.06
2466 2569 0.608640 TCTTCCTTCCGGCAAGAGAC 59.391 55.000 13.28 0.00 33.29 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.