Multiple sequence alignment - TraesCS5A01G076100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G076100 chr5A 100.000 4248 0 0 1 4248 91813787 91809540 0.000000e+00 7845
1 TraesCS5A01G076100 chr5D 92.337 2075 78 32 331 2379 96968489 96966470 0.000000e+00 2876
2 TraesCS5A01G076100 chr5D 90.719 1433 81 23 2421 3839 96966332 96964938 0.000000e+00 1862
3 TraesCS5A01G076100 chr5D 93.089 246 14 3 1 246 96968877 96968635 1.450000e-94 357
4 TraesCS5A01G076100 chr5B 92.384 1825 84 28 317 2115 103244909 103243114 0.000000e+00 2549
5 TraesCS5A01G076100 chr5B 92.789 1678 75 25 2183 3839 103243069 103241417 0.000000e+00 2386


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G076100 chr5A 91809540 91813787 4247 True 7845.000000 7845 100.000000 1 4248 1 chr5A.!!$R1 4247
1 TraesCS5A01G076100 chr5D 96964938 96968877 3939 True 1698.333333 2876 92.048333 1 3839 3 chr5D.!!$R1 3838
2 TraesCS5A01G076100 chr5B 103241417 103244909 3492 True 2467.500000 2549 92.586500 317 3839 2 chr5B.!!$R1 3522

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
858 1008 0.608640 ACGATGACACCTGTTCCTCC 59.391 55.0 0.0 0.0 0.0 4.30 F
1246 1406 0.036388 GGCGGTGATCAAGAACAGGA 60.036 55.0 0.0 0.0 0.0 3.86 F
1425 1588 0.324285 AGCTCTGCCAGAAGAAGGTG 59.676 55.0 0.0 0.0 0.0 4.00 F
2232 2402 0.389025 GTTGTGTTCAGCAAAGGGGG 59.611 55.0 0.0 0.0 0.0 5.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2232 2402 0.402121 AGTTGCCTTCCTTCACCCTC 59.598 55.000 0.00 0.0 0.00 4.30 R
2395 2565 1.205655 TGCTCATTGCTCTAGCGAAGT 59.794 47.619 0.00 0.0 45.83 3.01 R
2398 2568 1.410153 TCATGCTCATTGCTCTAGCGA 59.590 47.619 0.00 0.0 45.83 4.93 R
3926 4269 0.034756 TTGGACACTGTCGTGGATGG 59.965 55.000 3.04 0.0 45.50 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 8.053653 CACATGAAACATGCATCGATAAAAATG 58.946 33.333 0.00 2.60 0.00 2.32
36 37 4.504097 GCATCGATAAAAATGTTTGGCTCC 59.496 41.667 0.00 0.00 0.00 4.70
131 132 3.096092 TGCCTTGTTTGAAAGACCTTGT 58.904 40.909 0.00 0.00 0.00 3.16
133 134 3.130340 GCCTTGTTTGAAAGACCTTGTCA 59.870 43.478 0.00 0.00 34.60 3.58
137 138 5.756195 TGTTTGAAAGACCTTGTCATGAG 57.244 39.130 0.00 0.00 34.60 2.90
143 144 8.690203 TTGAAAGACCTTGTCATGAGAAATAA 57.310 30.769 6.75 0.00 34.60 1.40
167 168 4.351110 TGATGGAAAGGGATCCCAAATT 57.649 40.909 32.69 22.72 38.82 1.82
171 172 4.349365 TGGAAAGGGATCCCAAATTGTAC 58.651 43.478 32.69 8.45 38.82 2.90
173 174 4.962362 GGAAAGGGATCCCAAATTGTACAT 59.038 41.667 32.69 4.64 38.92 2.29
239 240 6.639632 AATAAATGGATGGATGGAAACGAG 57.360 37.500 0.00 0.00 0.00 4.18
246 247 3.251479 TGGATGGAAACGAGAGATGTG 57.749 47.619 0.00 0.00 0.00 3.21
251 364 5.220739 GGATGGAAACGAGAGATGTGAATTG 60.221 44.000 0.00 0.00 0.00 2.32
263 376 3.781079 TGTGAATTGCCGATTGATTCC 57.219 42.857 0.00 0.00 0.00 3.01
267 380 3.129113 TGAATTGCCGATTGATTCCACAG 59.871 43.478 0.00 0.00 0.00 3.66
276 389 4.692625 CGATTGATTCCACAGAAGACAAGT 59.307 41.667 0.00 0.00 36.44 3.16
277 390 5.180117 CGATTGATTCCACAGAAGACAAGTT 59.820 40.000 0.00 0.00 36.44 2.66
279 392 6.773976 TTGATTCCACAGAAGACAAGTTTT 57.226 33.333 0.00 0.00 34.86 2.43
280 393 6.773976 TGATTCCACAGAAGACAAGTTTTT 57.226 33.333 0.00 0.00 34.86 1.94
302 415 6.645700 TTTTGTTTTGAAATCACAGAGCAC 57.354 33.333 0.00 0.00 0.00 4.40
303 416 4.979943 TGTTTTGAAATCACAGAGCACA 57.020 36.364 0.00 0.00 0.00 4.57
304 417 5.321959 TGTTTTGAAATCACAGAGCACAA 57.678 34.783 0.00 0.00 0.00 3.33
305 418 5.342433 TGTTTTGAAATCACAGAGCACAAG 58.658 37.500 0.00 0.00 0.00 3.16
306 419 4.572985 TTTGAAATCACAGAGCACAAGG 57.427 40.909 0.00 0.00 0.00 3.61
307 420 3.213206 TGAAATCACAGAGCACAAGGT 57.787 42.857 0.00 0.00 0.00 3.50
308 421 3.554934 TGAAATCACAGAGCACAAGGTT 58.445 40.909 0.00 0.00 0.00 3.50
309 422 3.565482 TGAAATCACAGAGCACAAGGTTC 59.435 43.478 0.00 0.00 0.00 3.62
310 423 3.498774 AATCACAGAGCACAAGGTTCT 57.501 42.857 0.00 0.00 37.59 3.01
311 424 4.623932 AATCACAGAGCACAAGGTTCTA 57.376 40.909 0.00 0.00 34.49 2.10
312 425 4.623932 ATCACAGAGCACAAGGTTCTAA 57.376 40.909 0.00 0.00 34.49 2.10
313 426 4.415881 TCACAGAGCACAAGGTTCTAAA 57.584 40.909 0.00 0.00 34.49 1.85
314 427 4.973168 TCACAGAGCACAAGGTTCTAAAT 58.027 39.130 0.00 0.00 34.49 1.40
315 428 4.756642 TCACAGAGCACAAGGTTCTAAATG 59.243 41.667 0.00 0.00 34.49 2.32
316 429 3.503748 ACAGAGCACAAGGTTCTAAATGC 59.496 43.478 0.00 0.00 34.49 3.56
317 430 3.503363 CAGAGCACAAGGTTCTAAATGCA 59.497 43.478 0.00 0.00 34.49 3.96
318 431 4.022935 CAGAGCACAAGGTTCTAAATGCAA 60.023 41.667 0.00 0.00 34.49 4.08
319 432 4.584325 AGAGCACAAGGTTCTAAATGCAAA 59.416 37.500 0.00 0.00 35.03 3.68
320 433 5.068987 AGAGCACAAGGTTCTAAATGCAAAA 59.931 36.000 0.00 0.00 35.03 2.44
321 434 5.669477 AGCACAAGGTTCTAAATGCAAAAA 58.331 33.333 0.00 0.00 35.51 1.94
506 619 3.329386 CAGCGATATCACACCCCATAAG 58.671 50.000 3.12 0.00 0.00 1.73
549 666 4.939255 ACCAAGGATCCATTCACTCAAAT 58.061 39.130 15.82 0.00 0.00 2.32
562 679 9.624697 CCATTCACTCAAATCGATTTCTTTTTA 57.375 29.630 20.31 6.12 0.00 1.52
565 682 7.295201 TCACTCAAATCGATTTCTTTTTACCG 58.705 34.615 20.31 6.57 0.00 4.02
594 719 5.870978 CACCCAAAGCCAAAAATCTCATAAG 59.129 40.000 0.00 0.00 0.00 1.73
615 740 3.359002 GCCCTGCCAGAACACAAG 58.641 61.111 0.00 0.00 0.00 3.16
618 743 1.817740 GCCCTGCCAGAACACAAGTAA 60.818 52.381 0.00 0.00 0.00 2.24
624 749 5.691754 CCTGCCAGAACACAAGTAAAATTTC 59.308 40.000 0.00 0.00 0.00 2.17
625 750 5.277825 TGCCAGAACACAAGTAAAATTTCG 58.722 37.500 0.00 0.00 0.00 3.46
626 751 5.066634 TGCCAGAACACAAGTAAAATTTCGA 59.933 36.000 0.00 0.00 0.00 3.71
627 752 6.149633 GCCAGAACACAAGTAAAATTTCGAT 58.850 36.000 0.00 0.00 0.00 3.59
628 753 6.088085 GCCAGAACACAAGTAAAATTTCGATG 59.912 38.462 0.00 0.00 0.00 3.84
629 754 6.088085 CCAGAACACAAGTAAAATTTCGATGC 59.912 38.462 0.00 0.00 0.00 3.91
630 755 6.636447 CAGAACACAAGTAAAATTTCGATGCA 59.364 34.615 0.00 0.00 0.00 3.96
631 756 7.167302 CAGAACACAAGTAAAATTTCGATGCAA 59.833 33.333 0.00 0.00 0.00 4.08
632 757 7.704472 AGAACACAAGTAAAATTTCGATGCAAA 59.296 29.630 0.00 0.00 0.00 3.68
633 758 7.763172 ACACAAGTAAAATTTCGATGCAAAA 57.237 28.000 0.00 0.00 0.00 2.44
710 858 9.563748 TTACGGCCAAAATAATAATTACTAGCT 57.436 29.630 2.24 0.00 0.00 3.32
712 860 7.174426 ACGGCCAAAATAATAATTACTAGCTCC 59.826 37.037 2.24 0.00 0.00 4.70
713 861 7.361799 CGGCCAAAATAATAATTACTAGCTCCC 60.362 40.741 2.24 0.00 0.00 4.30
714 862 7.361799 GGCCAAAATAATAATTACTAGCTCCCG 60.362 40.741 0.00 0.00 0.00 5.14
715 863 7.361799 GCCAAAATAATAATTACTAGCTCCCGG 60.362 40.741 0.00 0.00 0.00 5.73
716 864 7.361799 CCAAAATAATAATTACTAGCTCCCGGC 60.362 40.741 0.00 0.00 42.19 6.13
717 865 3.697619 AATAATTACTAGCTCCCGGCC 57.302 47.619 0.00 0.00 43.05 6.13
718 866 1.345063 TAATTACTAGCTCCCGGCCC 58.655 55.000 0.00 0.00 43.05 5.80
719 867 1.755393 AATTACTAGCTCCCGGCCCG 61.755 60.000 0.00 0.00 43.05 6.13
858 1008 0.608640 ACGATGACACCTGTTCCTCC 59.391 55.000 0.00 0.00 0.00 4.30
866 1016 2.982488 ACACCTGTTCCTCCTCAAATCT 59.018 45.455 0.00 0.00 0.00 2.40
868 1018 3.262915 CACCTGTTCCTCCTCAAATCTCT 59.737 47.826 0.00 0.00 0.00 3.10
1246 1406 0.036388 GGCGGTGATCAAGAACAGGA 60.036 55.000 0.00 0.00 0.00 3.86
1249 1409 1.743996 GGTGATCAAGAACAGGAGGC 58.256 55.000 0.00 0.00 0.00 4.70
1281 1441 2.111999 CTGGTTCCAAGAGGCCGTCA 62.112 60.000 0.00 0.00 33.74 4.35
1310 1470 1.811679 CGCCGAGAAGGAAGAAGCC 60.812 63.158 0.00 0.00 45.00 4.35
1321 1481 4.736896 AGAAGCCGGAACCGTCGC 62.737 66.667 5.05 9.11 37.81 5.19
1341 1501 0.658897 CGTCTAGGAAGAGCTCGACC 59.341 60.000 19.62 19.62 30.45 4.79
1425 1588 0.324285 AGCTCTGCCAGAAGAAGGTG 59.676 55.000 0.00 0.00 0.00 4.00
1690 1856 1.304217 AAGAAGGAGTCGGCCTCGA 60.304 57.895 0.00 0.00 41.46 4.04
1785 1951 1.589993 CTACTGCATCGTCGGCCTG 60.590 63.158 0.00 0.00 0.00 4.85
1868 2037 2.932614 TCTCTGCCTACGTAACGTACTC 59.067 50.000 0.00 0.00 41.54 2.59
1888 2057 7.096844 CGTACTCATGTAAATCTTCTCGTGATG 60.097 40.741 0.00 0.00 0.00 3.07
1994 2163 7.061789 CCAATTTGGCTGAGTTTTAATACGAAC 59.938 37.037 1.71 0.00 0.00 3.95
1996 2165 4.643463 TGGCTGAGTTTTAATACGAACCA 58.357 39.130 0.00 0.00 0.00 3.67
2013 2182 5.309323 GAACCATCGATGAATTTTGTGGA 57.691 39.130 26.86 0.00 0.00 4.02
2143 2312 9.573133 ACAGTGCAACAAAAATAGATAAATAGC 57.427 29.630 0.00 0.00 41.43 2.97
2232 2402 0.389025 GTTGTGTTCAGCAAAGGGGG 59.611 55.000 0.00 0.00 0.00 5.40
2388 2558 5.048713 CACACTGAGGTTCTTGGTTAATTCC 60.049 44.000 0.00 0.00 0.00 3.01
2390 2560 6.043938 ACACTGAGGTTCTTGGTTAATTCCTA 59.956 38.462 0.00 0.00 0.00 2.94
2391 2561 6.371825 CACTGAGGTTCTTGGTTAATTCCTAC 59.628 42.308 0.00 0.00 0.00 3.18
2392 2562 6.272558 ACTGAGGTTCTTGGTTAATTCCTACT 59.727 38.462 0.00 0.00 0.00 2.57
2393 2563 6.708285 TGAGGTTCTTGGTTAATTCCTACTC 58.292 40.000 0.00 0.00 0.00 2.59
2394 2564 6.500751 TGAGGTTCTTGGTTAATTCCTACTCT 59.499 38.462 0.00 0.00 0.00 3.24
2395 2565 7.676893 TGAGGTTCTTGGTTAATTCCTACTCTA 59.323 37.037 0.00 0.00 0.00 2.43
2396 2566 7.849160 AGGTTCTTGGTTAATTCCTACTCTAC 58.151 38.462 0.00 0.00 0.00 2.59
2398 2568 8.319881 GGTTCTTGGTTAATTCCTACTCTACTT 58.680 37.037 0.00 0.00 0.00 2.24
2432 2610 5.009854 TGAGCATGATATCTCACGTGAAA 57.990 39.130 20.49 6.93 34.69 2.69
2438 2616 7.549134 AGCATGATATCTCACGTGAAAGTTAAA 59.451 33.333 20.49 3.40 33.22 1.52
2447 2625 7.960738 TCTCACGTGAAAGTTAAACTGAAAAAG 59.039 33.333 20.49 1.07 0.00 2.27
2490 2669 9.444600 GTTCAGTATAAGACCATGTTTTCCTTA 57.555 33.333 0.00 0.00 0.00 2.69
2528 2708 3.441496 ACATGTTCAAGTGCAACCTTG 57.559 42.857 10.11 10.11 42.57 3.61
2676 2990 3.444034 TCAGGTAAGCAGTAGCACACTAG 59.556 47.826 0.00 0.00 45.49 2.57
2677 2991 3.193691 CAGGTAAGCAGTAGCACACTAGT 59.806 47.826 0.00 0.00 45.49 2.57
2678 2992 4.398358 CAGGTAAGCAGTAGCACACTAGTA 59.602 45.833 0.00 0.00 45.49 1.82
2758 3073 2.979813 GCAAACGTAATGGCTGTTCTTG 59.020 45.455 0.00 0.00 0.00 3.02
2760 3075 2.851263 ACGTAATGGCTGTTCTTGGA 57.149 45.000 0.00 0.00 0.00 3.53
2835 3150 0.251634 GAGGCAGCAGAAGGTAGCTT 59.748 55.000 6.94 6.94 39.50 3.74
2839 3154 1.466558 GCAGCAGAAGGTAGCTTCAAC 59.533 52.381 30.59 22.64 39.50 3.18
2850 3165 2.156343 AGCTTCAACTGAACCGAGAC 57.844 50.000 0.00 0.00 0.00 3.36
2894 3224 5.559770 TCCAGATGCAAGAATTAACTGACA 58.440 37.500 0.00 0.00 0.00 3.58
2895 3225 6.182627 TCCAGATGCAAGAATTAACTGACAT 58.817 36.000 0.00 0.00 0.00 3.06
2896 3226 7.337938 TCCAGATGCAAGAATTAACTGACATA 58.662 34.615 0.00 0.00 0.00 2.29
2897 3227 7.496920 TCCAGATGCAAGAATTAACTGACATAG 59.503 37.037 0.00 0.00 0.00 2.23
2898 3228 7.281774 CCAGATGCAAGAATTAACTGACATAGT 59.718 37.037 0.00 0.00 42.89 2.12
2899 3229 8.121086 CAGATGCAAGAATTAACTGACATAGTG 58.879 37.037 0.00 0.00 40.26 2.74
2900 3230 8.043113 AGATGCAAGAATTAACTGACATAGTGA 58.957 33.333 0.00 0.00 40.26 3.41
2901 3231 7.364522 TGCAAGAATTAACTGACATAGTGAC 57.635 36.000 0.00 0.00 40.26 3.67
2945 3275 1.830279 TTTGCAGCTGGATGAAGAGG 58.170 50.000 17.12 0.00 0.00 3.69
3034 3364 4.080975 CCATTCATGCCCAAAAGGTAACAT 60.081 41.667 0.00 0.00 38.26 2.71
3035 3365 5.128499 CCATTCATGCCCAAAAGGTAACATA 59.872 40.000 0.00 0.00 38.26 2.29
3036 3366 6.351711 CCATTCATGCCCAAAAGGTAACATAA 60.352 38.462 0.00 0.00 38.26 1.90
3044 3374 6.764085 GCCCAAAAGGTAACATAACAAAAACT 59.236 34.615 0.00 0.00 38.26 2.66
3075 3405 4.521130 ATCATGATCATGCTCCATTTGC 57.479 40.909 27.68 0.00 38.65 3.68
3099 3429 5.237815 GTGATGAGACATGAACTGTGGTTA 58.762 41.667 0.00 0.00 38.54 2.85
3312 3646 3.741344 CACAGGACAAGTGTAGTAGCAAC 59.259 47.826 0.00 0.00 32.44 4.17
3393 3727 3.867857 ACACACACACACATAACACAGA 58.132 40.909 0.00 0.00 0.00 3.41
3400 3734 4.072131 ACACACATAACACAGACCAATCC 58.928 43.478 0.00 0.00 0.00 3.01
3404 3738 5.833131 ACACATAACACAGACCAATCCTTTT 59.167 36.000 0.00 0.00 0.00 2.27
3446 3782 0.984961 TTGAGGAGCTAGCTGGGCAT 60.985 55.000 24.99 5.17 0.00 4.40
3450 3786 0.817229 GGAGCTAGCTGGGCATTGAC 60.817 60.000 24.99 3.61 0.00 3.18
3466 3802 4.457810 CATTGACGTCAGCTGTTAAACTG 58.542 43.478 19.11 3.93 35.15 3.16
3574 3910 1.100510 CAGTTGGCATGTCTGGGATG 58.899 55.000 0.00 0.00 0.00 3.51
3581 3919 2.360165 GGCATGTCTGGGATGTGATTTC 59.640 50.000 0.00 0.00 0.00 2.17
3737 4076 4.688511 TTATTGACGCGGTTTTATTGCT 57.311 36.364 12.47 0.00 0.00 3.91
3780 4119 5.473066 AACTCTTCCAATTTCCAACATGG 57.527 39.130 0.00 0.00 39.43 3.66
3788 4127 4.175516 CAATTTCCAACATGGTTCATCCG 58.824 43.478 0.00 0.00 39.03 4.18
3789 4128 1.832883 TTCCAACATGGTTCATCCGG 58.167 50.000 0.00 0.00 39.03 5.14
3790 4129 0.695924 TCCAACATGGTTCATCCGGT 59.304 50.000 0.00 0.00 39.03 5.28
3791 4130 1.074727 TCCAACATGGTTCATCCGGTT 59.925 47.619 0.00 0.00 39.03 4.44
3792 4131 1.892474 CCAACATGGTTCATCCGGTTT 59.108 47.619 0.00 0.00 39.52 3.27
3793 4132 2.298729 CCAACATGGTTCATCCGGTTTT 59.701 45.455 0.00 0.00 39.52 2.43
3795 4134 4.481463 CAACATGGTTCATCCGGTTTTAC 58.519 43.478 0.00 0.00 39.52 2.01
3797 4136 5.168647 ACATGGTTCATCCGGTTTTACTA 57.831 39.130 0.00 0.00 39.52 1.82
3799 4138 5.588648 ACATGGTTCATCCGGTTTTACTATG 59.411 40.000 17.25 17.25 39.52 2.23
3800 4139 3.942748 TGGTTCATCCGGTTTTACTATGC 59.057 43.478 0.00 0.00 39.52 3.14
3801 4140 4.196971 GGTTCATCCGGTTTTACTATGCT 58.803 43.478 0.00 0.00 0.00 3.79
3802 4141 5.104859 TGGTTCATCCGGTTTTACTATGCTA 60.105 40.000 0.00 0.00 39.52 3.49
3856 4199 8.422973 TTTTTGGCTATTATTGCTTAGCATTG 57.577 30.769 8.05 0.00 42.08 2.82
3857 4200 6.713762 TTGGCTATTATTGCTTAGCATTGT 57.286 33.333 8.05 0.00 42.08 2.71
3858 4201 6.317789 TGGCTATTATTGCTTAGCATTGTC 57.682 37.500 8.05 0.00 42.08 3.18
3859 4202 6.064060 TGGCTATTATTGCTTAGCATTGTCT 58.936 36.000 8.05 0.00 42.08 3.41
3860 4203 6.016860 TGGCTATTATTGCTTAGCATTGTCTG 60.017 38.462 8.05 0.00 42.08 3.51
3861 4204 6.205464 GGCTATTATTGCTTAGCATTGTCTGA 59.795 38.462 8.05 0.00 42.08 3.27
3862 4205 7.296660 GCTATTATTGCTTAGCATTGTCTGAG 58.703 38.462 8.05 1.55 40.42 3.35
3863 4206 7.172190 GCTATTATTGCTTAGCATTGTCTGAGA 59.828 37.037 8.05 0.00 40.42 3.27
3864 4207 9.217278 CTATTATTGCTTAGCATTGTCTGAGAT 57.783 33.333 8.05 0.00 38.76 2.75
3865 4208 7.870509 TTATTGCTTAGCATTGTCTGAGATT 57.129 32.000 8.05 0.00 38.76 2.40
3866 4209 5.808042 TTGCTTAGCATTGTCTGAGATTC 57.192 39.130 8.05 0.00 38.76 2.52
3867 4210 5.095145 TGCTTAGCATTGTCTGAGATTCT 57.905 39.130 1.39 0.00 31.71 2.40
3868 4211 4.874396 TGCTTAGCATTGTCTGAGATTCTG 59.126 41.667 1.39 0.00 31.71 3.02
3869 4212 5.114780 GCTTAGCATTGTCTGAGATTCTGA 58.885 41.667 0.00 0.00 0.00 3.27
3870 4213 5.583854 GCTTAGCATTGTCTGAGATTCTGAA 59.416 40.000 0.00 0.00 0.00 3.02
3871 4214 6.238157 GCTTAGCATTGTCTGAGATTCTGAAG 60.238 42.308 0.00 0.00 0.00 3.02
3872 4215 4.515361 AGCATTGTCTGAGATTCTGAAGG 58.485 43.478 0.00 0.00 0.00 3.46
3873 4216 3.626670 GCATTGTCTGAGATTCTGAAGGG 59.373 47.826 0.00 0.00 0.00 3.95
3874 4217 4.841422 CATTGTCTGAGATTCTGAAGGGT 58.159 43.478 0.00 0.00 0.00 4.34
3875 4218 3.969287 TGTCTGAGATTCTGAAGGGTG 57.031 47.619 0.00 0.00 0.00 4.61
3876 4219 2.027745 TGTCTGAGATTCTGAAGGGTGC 60.028 50.000 0.00 0.00 0.00 5.01
3877 4220 2.235898 GTCTGAGATTCTGAAGGGTGCT 59.764 50.000 0.00 0.00 0.00 4.40
3878 4221 2.235650 TCTGAGATTCTGAAGGGTGCTG 59.764 50.000 0.00 0.00 0.00 4.41
3879 4222 1.980765 TGAGATTCTGAAGGGTGCTGT 59.019 47.619 0.00 0.00 0.00 4.40
3880 4223 2.289882 TGAGATTCTGAAGGGTGCTGTG 60.290 50.000 0.00 0.00 0.00 3.66
3881 4224 1.701847 AGATTCTGAAGGGTGCTGTGT 59.298 47.619 0.00 0.00 0.00 3.72
3882 4225 1.808945 GATTCTGAAGGGTGCTGTGTG 59.191 52.381 0.00 0.00 0.00 3.82
3883 4226 0.179020 TTCTGAAGGGTGCTGTGTGG 60.179 55.000 0.00 0.00 0.00 4.17
3884 4227 1.149174 CTGAAGGGTGCTGTGTGGT 59.851 57.895 0.00 0.00 0.00 4.16
3885 4228 0.466189 CTGAAGGGTGCTGTGTGGTT 60.466 55.000 0.00 0.00 0.00 3.67
3886 4229 0.465460 TGAAGGGTGCTGTGTGGTTC 60.465 55.000 0.00 0.00 0.00 3.62
3887 4230 0.465460 GAAGGGTGCTGTGTGGTTCA 60.465 55.000 0.00 0.00 0.00 3.18
3888 4231 0.185901 AAGGGTGCTGTGTGGTTCAT 59.814 50.000 0.00 0.00 0.00 2.57
3889 4232 1.064003 AGGGTGCTGTGTGGTTCATA 58.936 50.000 0.00 0.00 0.00 2.15
3890 4233 1.165270 GGGTGCTGTGTGGTTCATAC 58.835 55.000 0.00 0.00 0.00 2.39
3891 4234 1.544537 GGGTGCTGTGTGGTTCATACA 60.545 52.381 0.00 0.00 34.54 2.29
3898 4241 5.095691 CTGTGTGGTTCATACAGTTTGTC 57.904 43.478 14.03 0.00 44.62 3.18
3899 4242 4.518249 TGTGTGGTTCATACAGTTTGTCA 58.482 39.130 0.00 0.00 30.94 3.58
3900 4243 4.334203 TGTGTGGTTCATACAGTTTGTCAC 59.666 41.667 0.00 0.00 30.94 3.67
3901 4244 4.574828 GTGTGGTTCATACAGTTTGTCACT 59.425 41.667 12.10 0.00 35.35 3.41
3902 4245 5.065988 GTGTGGTTCATACAGTTTGTCACTT 59.934 40.000 12.10 0.00 30.92 3.16
3903 4246 5.065859 TGTGGTTCATACAGTTTGTCACTTG 59.934 40.000 12.10 0.00 30.92 3.16
3904 4247 5.065988 GTGGTTCATACAGTTTGTCACTTGT 59.934 40.000 0.00 0.00 30.92 3.16
3905 4248 5.295787 TGGTTCATACAGTTTGTCACTTGTC 59.704 40.000 0.00 0.00 30.92 3.18
3906 4249 5.432157 GTTCATACAGTTTGTCACTTGTCG 58.568 41.667 0.00 0.00 30.92 4.35
3907 4250 4.939271 TCATACAGTTTGTCACTTGTCGA 58.061 39.130 0.00 0.00 30.92 4.20
3908 4251 5.538118 TCATACAGTTTGTCACTTGTCGAT 58.462 37.500 0.00 0.00 30.92 3.59
3909 4252 6.683715 TCATACAGTTTGTCACTTGTCGATA 58.316 36.000 0.00 0.00 30.92 2.92
3910 4253 6.806739 TCATACAGTTTGTCACTTGTCGATAG 59.193 38.462 0.00 0.00 30.92 2.08
3911 4254 4.307432 ACAGTTTGTCACTTGTCGATAGG 58.693 43.478 0.00 0.00 30.92 2.57
3912 4255 4.038763 ACAGTTTGTCACTTGTCGATAGGA 59.961 41.667 0.00 0.00 30.92 2.94
3913 4256 4.988540 CAGTTTGTCACTTGTCGATAGGAA 59.011 41.667 0.00 0.00 30.92 3.36
3914 4257 5.119279 CAGTTTGTCACTTGTCGATAGGAAG 59.881 44.000 0.00 0.00 30.92 3.46
3915 4258 3.232213 TGTCACTTGTCGATAGGAAGC 57.768 47.619 0.00 0.00 31.57 3.86
3916 4259 2.094182 TGTCACTTGTCGATAGGAAGCC 60.094 50.000 0.00 0.00 31.57 4.35
3917 4260 2.166664 GTCACTTGTCGATAGGAAGCCT 59.833 50.000 0.00 0.00 37.71 4.58
3918 4261 2.166459 TCACTTGTCGATAGGAAGCCTG 59.834 50.000 0.00 0.00 34.61 4.85
3919 4262 1.482593 ACTTGTCGATAGGAAGCCTGG 59.517 52.381 0.00 0.00 34.61 4.45
3920 4263 1.757118 CTTGTCGATAGGAAGCCTGGA 59.243 52.381 0.00 0.00 34.61 3.86
3921 4264 1.860641 TGTCGATAGGAAGCCTGGAA 58.139 50.000 0.00 0.00 34.61 3.53
3922 4265 1.757118 TGTCGATAGGAAGCCTGGAAG 59.243 52.381 0.00 0.00 34.61 3.46
3923 4266 1.757699 GTCGATAGGAAGCCTGGAAGT 59.242 52.381 0.00 0.00 34.61 3.01
3924 4267 2.168728 GTCGATAGGAAGCCTGGAAGTT 59.831 50.000 0.00 0.00 34.61 2.66
3925 4268 2.431057 TCGATAGGAAGCCTGGAAGTTC 59.569 50.000 0.00 0.00 34.61 3.01
3926 4269 2.483889 CGATAGGAAGCCTGGAAGTTCC 60.484 54.545 15.50 15.50 40.19 3.62
3927 4270 1.286248 TAGGAAGCCTGGAAGTTCCC 58.714 55.000 19.42 4.00 40.70 3.97
3928 4271 0.772124 AGGAAGCCTGGAAGTTCCCA 60.772 55.000 19.42 6.66 40.70 4.37
3929 4272 0.332972 GGAAGCCTGGAAGTTCCCAT 59.667 55.000 19.42 0.78 35.03 4.00
3930 4273 1.683319 GGAAGCCTGGAAGTTCCCATC 60.683 57.143 19.42 9.60 35.03 3.51
3931 4274 0.332972 AAGCCTGGAAGTTCCCATCC 59.667 55.000 19.42 5.28 35.03 3.51
3932 4275 0.846427 AGCCTGGAAGTTCCCATCCA 60.846 55.000 19.42 0.00 43.32 3.41
3933 4276 0.681243 GCCTGGAAGTTCCCATCCAC 60.681 60.000 19.42 0.00 40.74 4.02
3934 4277 0.392998 CCTGGAAGTTCCCATCCACG 60.393 60.000 19.42 0.00 40.74 4.94
3935 4278 0.613260 CTGGAAGTTCCCATCCACGA 59.387 55.000 19.42 0.00 40.74 4.35
3936 4279 0.323629 TGGAAGTTCCCATCCACGAC 59.676 55.000 19.42 0.00 40.74 4.34
3937 4280 0.323629 GGAAGTTCCCATCCACGACA 59.676 55.000 11.17 0.00 35.71 4.35
3938 4281 1.676014 GGAAGTTCCCATCCACGACAG 60.676 57.143 11.17 0.00 35.71 3.51
3939 4282 1.002087 GAAGTTCCCATCCACGACAGT 59.998 52.381 0.00 0.00 0.00 3.55
3941 4284 0.034896 GTTCCCATCCACGACAGTGT 59.965 55.000 0.00 0.00 46.56 3.55
3942 4285 0.320374 TTCCCATCCACGACAGTGTC 59.680 55.000 13.56 13.56 46.56 3.67
3943 4286 1.079127 CCCATCCACGACAGTGTCC 60.079 63.158 17.57 0.38 46.56 4.02
3944 4287 1.671166 CCATCCACGACAGTGTCCA 59.329 57.895 17.57 0.00 46.56 4.02
3945 4288 0.034756 CCATCCACGACAGTGTCCAA 59.965 55.000 17.57 1.15 46.56 3.53
3946 4289 1.339055 CCATCCACGACAGTGTCCAAT 60.339 52.381 17.57 0.59 46.56 3.16
3947 4290 2.093711 CCATCCACGACAGTGTCCAATA 60.094 50.000 17.57 1.83 46.56 1.90
3948 4291 3.190079 CATCCACGACAGTGTCCAATAG 58.810 50.000 17.57 5.67 46.56 1.73
3949 4292 2.244695 TCCACGACAGTGTCCAATAGT 58.755 47.619 17.57 6.32 46.56 2.12
3950 4293 2.029380 TCCACGACAGTGTCCAATAGTG 60.029 50.000 17.57 17.09 46.56 2.74
3951 4294 2.288825 CCACGACAGTGTCCAATAGTGT 60.289 50.000 17.57 4.88 46.56 3.55
3952 4295 3.057104 CCACGACAGTGTCCAATAGTGTA 60.057 47.826 17.57 0.00 46.56 2.90
3953 4296 4.381612 CCACGACAGTGTCCAATAGTGTAT 60.382 45.833 17.57 0.00 46.56 2.29
3954 4297 4.562789 CACGACAGTGTCCAATAGTGTATG 59.437 45.833 17.57 1.59 43.15 2.39
3955 4298 4.461431 ACGACAGTGTCCAATAGTGTATGA 59.539 41.667 17.57 0.00 32.14 2.15
3956 4299 4.798907 CGACAGTGTCCAATAGTGTATGAC 59.201 45.833 17.57 0.00 32.14 3.06
3957 4300 5.086104 ACAGTGTCCAATAGTGTATGACC 57.914 43.478 0.00 0.00 30.29 4.02
3958 4301 4.081087 ACAGTGTCCAATAGTGTATGACCC 60.081 45.833 0.00 0.00 30.29 4.46
3959 4302 4.081142 CAGTGTCCAATAGTGTATGACCCA 60.081 45.833 0.00 0.00 0.00 4.51
3960 4303 4.534500 AGTGTCCAATAGTGTATGACCCAA 59.466 41.667 0.00 0.00 0.00 4.12
3961 4304 5.191722 AGTGTCCAATAGTGTATGACCCAAT 59.808 40.000 0.00 0.00 0.00 3.16
3962 4305 6.385759 AGTGTCCAATAGTGTATGACCCAATA 59.614 38.462 0.00 0.00 0.00 1.90
3963 4306 6.706270 GTGTCCAATAGTGTATGACCCAATAG 59.294 42.308 0.00 0.00 0.00 1.73
3964 4307 6.385759 TGTCCAATAGTGTATGACCCAATAGT 59.614 38.462 0.00 0.00 0.00 2.12
3965 4308 6.706270 GTCCAATAGTGTATGACCCAATAGTG 59.294 42.308 0.00 0.00 30.84 2.74
3966 4309 6.613679 TCCAATAGTGTATGACCCAATAGTGA 59.386 38.462 0.00 0.00 32.21 3.41
3967 4310 7.292356 TCCAATAGTGTATGACCCAATAGTGAT 59.708 37.037 0.00 0.00 32.21 3.06
3968 4311 7.388776 CCAATAGTGTATGACCCAATAGTGATG 59.611 40.741 0.00 0.00 32.21 3.07
3969 4312 7.855784 ATAGTGTATGACCCAATAGTGATGA 57.144 36.000 0.00 0.00 0.00 2.92
3970 4313 6.753913 AGTGTATGACCCAATAGTGATGAT 57.246 37.500 0.00 0.00 0.00 2.45
3971 4314 7.855784 AGTGTATGACCCAATAGTGATGATA 57.144 36.000 0.00 0.00 0.00 2.15
3972 4315 8.441311 AGTGTATGACCCAATAGTGATGATAT 57.559 34.615 0.00 0.00 0.00 1.63
3973 4316 9.547279 AGTGTATGACCCAATAGTGATGATATA 57.453 33.333 0.00 0.00 0.00 0.86
3974 4317 9.809096 GTGTATGACCCAATAGTGATGATATAG 57.191 37.037 0.00 0.00 0.00 1.31
3975 4318 8.478066 TGTATGACCCAATAGTGATGATATAGC 58.522 37.037 0.00 0.00 0.00 2.97
3976 4319 7.746243 ATGACCCAATAGTGATGATATAGCT 57.254 36.000 0.00 0.00 0.00 3.32
3977 4320 7.559335 TGACCCAATAGTGATGATATAGCTT 57.441 36.000 0.00 0.00 0.00 3.74
3978 4321 8.664669 TGACCCAATAGTGATGATATAGCTTA 57.335 34.615 0.00 0.00 0.00 3.09
3979 4322 8.531982 TGACCCAATAGTGATGATATAGCTTAC 58.468 37.037 0.00 0.00 0.00 2.34
3980 4323 8.671987 ACCCAATAGTGATGATATAGCTTACT 57.328 34.615 0.00 0.00 0.00 2.24
3981 4324 8.754080 ACCCAATAGTGATGATATAGCTTACTC 58.246 37.037 0.00 0.00 0.00 2.59
3982 4325 7.918033 CCCAATAGTGATGATATAGCTTACTCG 59.082 40.741 0.00 0.00 0.00 4.18
3983 4326 7.918033 CCAATAGTGATGATATAGCTTACTCGG 59.082 40.741 0.00 0.00 0.00 4.63
3984 4327 5.317733 AGTGATGATATAGCTTACTCGGC 57.682 43.478 0.00 0.00 0.00 5.54
3985 4328 4.767409 AGTGATGATATAGCTTACTCGGCA 59.233 41.667 0.00 0.00 0.00 5.69
3986 4329 5.243954 AGTGATGATATAGCTTACTCGGCAA 59.756 40.000 0.00 0.00 0.00 4.52
3987 4330 6.071108 AGTGATGATATAGCTTACTCGGCAAT 60.071 38.462 0.00 0.00 0.00 3.56
3988 4331 7.122799 AGTGATGATATAGCTTACTCGGCAATA 59.877 37.037 0.00 0.00 0.00 1.90
3989 4332 7.221067 GTGATGATATAGCTTACTCGGCAATAC 59.779 40.741 0.00 0.00 0.00 1.89
3990 4333 5.962433 TGATATAGCTTACTCGGCAATACC 58.038 41.667 0.00 0.00 0.00 2.73
3991 4334 3.679824 ATAGCTTACTCGGCAATACCC 57.320 47.619 0.00 0.00 33.26 3.69
3992 4335 1.200519 AGCTTACTCGGCAATACCCA 58.799 50.000 0.00 0.00 33.26 4.51
3993 4336 1.557832 AGCTTACTCGGCAATACCCAA 59.442 47.619 0.00 0.00 33.26 4.12
3994 4337 2.172717 AGCTTACTCGGCAATACCCAAT 59.827 45.455 0.00 0.00 33.26 3.16
3995 4338 3.389983 AGCTTACTCGGCAATACCCAATA 59.610 43.478 0.00 0.00 33.26 1.90
3996 4339 3.746492 GCTTACTCGGCAATACCCAATAG 59.254 47.826 0.00 0.00 33.26 1.73
3997 4340 2.256117 ACTCGGCAATACCCAATAGC 57.744 50.000 0.00 0.00 33.26 2.97
3998 4341 1.148310 CTCGGCAATACCCAATAGCG 58.852 55.000 0.00 0.00 33.26 4.26
3999 4342 0.466543 TCGGCAATACCCAATAGCGT 59.533 50.000 0.00 0.00 33.26 5.07
4000 4343 1.687660 TCGGCAATACCCAATAGCGTA 59.312 47.619 0.00 0.00 33.26 4.42
4001 4344 2.300723 TCGGCAATACCCAATAGCGTAT 59.699 45.455 0.00 0.00 33.26 3.06
4002 4345 2.415168 CGGCAATACCCAATAGCGTATG 59.585 50.000 0.00 0.00 33.26 2.39
4003 4346 3.670625 GGCAATACCCAATAGCGTATGA 58.329 45.455 0.00 0.00 0.00 2.15
4004 4347 3.435671 GGCAATACCCAATAGCGTATGAC 59.564 47.826 0.00 0.00 0.00 3.06
4005 4348 3.435671 GCAATACCCAATAGCGTATGACC 59.564 47.826 0.00 0.00 0.00 4.02
4006 4349 3.975168 ATACCCAATAGCGTATGACCC 57.025 47.619 0.00 0.00 0.00 4.46
4007 4350 1.802553 ACCCAATAGCGTATGACCCT 58.197 50.000 0.00 0.00 0.00 4.34
4008 4351 2.966915 ACCCAATAGCGTATGACCCTA 58.033 47.619 0.00 0.00 0.00 3.53
4009 4352 2.897969 ACCCAATAGCGTATGACCCTAG 59.102 50.000 0.00 0.00 0.00 3.02
4010 4353 2.233922 CCCAATAGCGTATGACCCTAGG 59.766 54.545 0.06 0.06 0.00 3.02
4011 4354 2.897969 CCAATAGCGTATGACCCTAGGT 59.102 50.000 8.29 0.00 39.44 3.08
4012 4355 4.084287 CCAATAGCGTATGACCCTAGGTA 58.916 47.826 8.29 0.00 35.25 3.08
4013 4356 4.710375 CCAATAGCGTATGACCCTAGGTAT 59.290 45.833 8.29 1.93 35.25 2.73
4014 4357 5.394224 CCAATAGCGTATGACCCTAGGTATG 60.394 48.000 8.29 0.00 35.25 2.39
4015 4358 1.893801 AGCGTATGACCCTAGGTATGC 59.106 52.381 8.29 10.32 35.25 3.14
4016 4359 1.893801 GCGTATGACCCTAGGTATGCT 59.106 52.381 8.29 0.00 35.25 3.79
4017 4360 2.299297 GCGTATGACCCTAGGTATGCTT 59.701 50.000 8.29 0.00 35.25 3.91
4018 4361 3.244112 GCGTATGACCCTAGGTATGCTTT 60.244 47.826 8.29 0.00 35.25 3.51
4019 4362 4.307432 CGTATGACCCTAGGTATGCTTTG 58.693 47.826 8.29 0.00 35.25 2.77
4020 4363 3.864789 ATGACCCTAGGTATGCTTTGG 57.135 47.619 8.29 0.00 35.25 3.28
4021 4364 2.557869 TGACCCTAGGTATGCTTTGGT 58.442 47.619 8.29 0.00 35.25 3.67
4022 4365 2.916934 TGACCCTAGGTATGCTTTGGTT 59.083 45.455 8.29 0.00 35.25 3.67
4023 4366 3.279434 GACCCTAGGTATGCTTTGGTTG 58.721 50.000 8.29 0.00 35.25 3.77
4024 4367 2.024414 CCCTAGGTATGCTTTGGTTGC 58.976 52.381 8.29 0.00 0.00 4.17
4025 4368 2.620367 CCCTAGGTATGCTTTGGTTGCA 60.620 50.000 8.29 0.00 44.95 4.08
4027 4370 3.316308 CCTAGGTATGCTTTGGTTGCATC 59.684 47.826 0.00 0.00 46.80 3.91
4028 4371 1.745087 AGGTATGCTTTGGTTGCATCG 59.255 47.619 4.42 0.00 46.80 3.84
4029 4372 1.742831 GGTATGCTTTGGTTGCATCGA 59.257 47.619 4.42 0.00 46.80 3.59
4030 4373 2.223340 GGTATGCTTTGGTTGCATCGAG 60.223 50.000 4.42 0.00 46.80 4.04
4031 4374 1.825090 ATGCTTTGGTTGCATCGAGA 58.175 45.000 0.00 0.00 46.80 4.04
4032 4375 1.159285 TGCTTTGGTTGCATCGAGAG 58.841 50.000 0.00 0.00 35.31 3.20
4033 4376 0.179179 GCTTTGGTTGCATCGAGAGC 60.179 55.000 6.56 6.56 0.00 4.09
4034 4377 0.449388 CTTTGGTTGCATCGAGAGCC 59.551 55.000 9.79 0.00 0.00 4.70
4035 4378 1.298157 TTTGGTTGCATCGAGAGCCG 61.298 55.000 9.79 0.00 40.25 5.52
4043 4386 2.673341 TCGAGAGCCGAGCTGTGT 60.673 61.111 2.98 0.00 43.23 3.72
4044 4387 2.259818 CGAGAGCCGAGCTGTGTT 59.740 61.111 2.98 0.00 39.88 3.32
4045 4388 1.373497 CGAGAGCCGAGCTGTGTTT 60.373 57.895 2.98 0.00 39.88 2.83
4046 4389 0.109272 CGAGAGCCGAGCTGTGTTTA 60.109 55.000 2.98 0.00 39.88 2.01
4047 4390 1.634702 GAGAGCCGAGCTGTGTTTAG 58.365 55.000 2.98 0.00 39.88 1.85
4048 4391 1.202582 GAGAGCCGAGCTGTGTTTAGA 59.797 52.381 2.98 0.00 39.88 2.10
4049 4392 1.203523 AGAGCCGAGCTGTGTTTAGAG 59.796 52.381 2.98 0.00 39.88 2.43
4050 4393 1.202582 GAGCCGAGCTGTGTTTAGAGA 59.797 52.381 2.98 0.00 39.88 3.10
4051 4394 1.827969 AGCCGAGCTGTGTTTAGAGAT 59.172 47.619 0.00 0.00 37.57 2.75
4052 4395 2.234908 AGCCGAGCTGTGTTTAGAGATT 59.765 45.455 0.00 0.00 37.57 2.40
4053 4396 2.605366 GCCGAGCTGTGTTTAGAGATTC 59.395 50.000 0.00 0.00 0.00 2.52
4054 4397 3.849911 CCGAGCTGTGTTTAGAGATTCA 58.150 45.455 0.00 0.00 0.00 2.57
4055 4398 3.862267 CCGAGCTGTGTTTAGAGATTCAG 59.138 47.826 0.00 0.00 0.00 3.02
4056 4399 4.380973 CCGAGCTGTGTTTAGAGATTCAGA 60.381 45.833 0.00 0.00 0.00 3.27
4057 4400 4.797868 CGAGCTGTGTTTAGAGATTCAGAG 59.202 45.833 0.00 0.00 0.00 3.35
4058 4401 4.502962 AGCTGTGTTTAGAGATTCAGAGC 58.497 43.478 5.28 5.28 43.99 4.09
4059 4402 4.020751 AGCTGTGTTTAGAGATTCAGAGCA 60.021 41.667 13.69 0.00 45.35 4.26
4060 4403 4.874966 GCTGTGTTTAGAGATTCAGAGCAT 59.125 41.667 7.96 0.00 43.43 3.79
4061 4404 5.006552 GCTGTGTTTAGAGATTCAGAGCATC 59.993 44.000 7.96 0.00 43.43 3.91
4074 4417 2.226602 GAGCATCTCTAACCCGTTCC 57.773 55.000 0.00 0.00 0.00 3.62
4075 4418 1.757699 GAGCATCTCTAACCCGTTCCT 59.242 52.381 0.00 0.00 0.00 3.36
4076 4419 2.168728 GAGCATCTCTAACCCGTTCCTT 59.831 50.000 0.00 0.00 0.00 3.36
4077 4420 2.168728 AGCATCTCTAACCCGTTCCTTC 59.831 50.000 0.00 0.00 0.00 3.46
4078 4421 2.093658 GCATCTCTAACCCGTTCCTTCA 60.094 50.000 0.00 0.00 0.00 3.02
4079 4422 3.618997 GCATCTCTAACCCGTTCCTTCAA 60.619 47.826 0.00 0.00 0.00 2.69
4080 4423 4.575885 CATCTCTAACCCGTTCCTTCAAA 58.424 43.478 0.00 0.00 0.00 2.69
4081 4424 4.693042 TCTCTAACCCGTTCCTTCAAAA 57.307 40.909 0.00 0.00 0.00 2.44
4082 4425 4.383173 TCTCTAACCCGTTCCTTCAAAAC 58.617 43.478 0.00 0.00 0.00 2.43
4083 4426 4.102054 TCTCTAACCCGTTCCTTCAAAACT 59.898 41.667 0.00 0.00 0.00 2.66
4084 4427 4.784177 TCTAACCCGTTCCTTCAAAACTT 58.216 39.130 0.00 0.00 0.00 2.66
4085 4428 5.195185 TCTAACCCGTTCCTTCAAAACTTT 58.805 37.500 0.00 0.00 0.00 2.66
4086 4429 4.811969 AACCCGTTCCTTCAAAACTTTT 57.188 36.364 0.00 0.00 0.00 2.27
4087 4430 4.811969 ACCCGTTCCTTCAAAACTTTTT 57.188 36.364 0.00 0.00 0.00 1.94
4088 4431 5.918426 ACCCGTTCCTTCAAAACTTTTTA 57.082 34.783 0.00 0.00 0.00 1.52
4089 4432 6.283544 ACCCGTTCCTTCAAAACTTTTTAA 57.716 33.333 0.00 0.00 0.00 1.52
4090 4433 6.880484 ACCCGTTCCTTCAAAACTTTTTAAT 58.120 32.000 0.00 0.00 0.00 1.40
4091 4434 7.332557 ACCCGTTCCTTCAAAACTTTTTAATT 58.667 30.769 0.00 0.00 0.00 1.40
4092 4435 7.493320 ACCCGTTCCTTCAAAACTTTTTAATTC 59.507 33.333 0.00 0.00 0.00 2.17
4093 4436 7.042321 CCCGTTCCTTCAAAACTTTTTAATTCC 60.042 37.037 0.00 0.00 0.00 3.01
4094 4437 7.709182 CCGTTCCTTCAAAACTTTTTAATTCCT 59.291 33.333 0.00 0.00 0.00 3.36
4095 4438 9.093970 CGTTCCTTCAAAACTTTTTAATTCCTT 57.906 29.630 0.00 0.00 0.00 3.36
4149 4492 7.204604 ACAAAGTTTGTTTAGGGAATTAACCG 58.795 34.615 15.58 0.00 42.22 4.44
4150 4493 5.381174 AGTTTGTTTAGGGAATTAACCGC 57.619 39.130 0.00 0.00 0.00 5.68
4151 4494 4.828387 AGTTTGTTTAGGGAATTAACCGCA 59.172 37.500 0.00 0.00 0.00 5.69
4152 4495 5.048294 AGTTTGTTTAGGGAATTAACCGCAG 60.048 40.000 0.00 0.00 0.00 5.18
4153 4496 2.750712 TGTTTAGGGAATTAACCGCAGC 59.249 45.455 0.00 0.00 0.00 5.25
4154 4497 3.014623 GTTTAGGGAATTAACCGCAGCT 58.985 45.455 0.00 0.00 0.00 4.24
4155 4498 4.193865 GTTTAGGGAATTAACCGCAGCTA 58.806 43.478 0.00 0.00 0.00 3.32
4156 4499 4.490899 TTAGGGAATTAACCGCAGCTAA 57.509 40.909 0.00 0.00 0.00 3.09
4157 4500 3.577805 AGGGAATTAACCGCAGCTAAT 57.422 42.857 0.00 0.00 0.00 1.73
4158 4501 3.898482 AGGGAATTAACCGCAGCTAATT 58.102 40.909 0.00 0.00 31.85 1.40
4159 4502 3.883489 AGGGAATTAACCGCAGCTAATTC 59.117 43.478 13.59 13.59 41.04 2.17
4160 4503 3.883489 GGGAATTAACCGCAGCTAATTCT 59.117 43.478 18.28 0.00 41.31 2.40
4161 4504 4.338400 GGGAATTAACCGCAGCTAATTCTT 59.662 41.667 18.28 0.00 41.31 2.52
4162 4505 5.505819 GGGAATTAACCGCAGCTAATTCTTC 60.506 44.000 18.28 11.31 41.31 2.87
4163 4506 5.500645 AATTAACCGCAGCTAATTCTTCC 57.499 39.130 0.00 0.00 0.00 3.46
4164 4507 1.751437 AACCGCAGCTAATTCTTCCC 58.249 50.000 0.00 0.00 0.00 3.97
4165 4508 0.912486 ACCGCAGCTAATTCTTCCCT 59.088 50.000 0.00 0.00 0.00 4.20
4166 4509 1.134371 ACCGCAGCTAATTCTTCCCTC 60.134 52.381 0.00 0.00 0.00 4.30
4167 4510 1.134401 CCGCAGCTAATTCTTCCCTCA 60.134 52.381 0.00 0.00 0.00 3.86
4168 4511 2.632377 CGCAGCTAATTCTTCCCTCAA 58.368 47.619 0.00 0.00 0.00 3.02
4169 4512 3.009723 CGCAGCTAATTCTTCCCTCAAA 58.990 45.455 0.00 0.00 0.00 2.69
4170 4513 3.440173 CGCAGCTAATTCTTCCCTCAAAA 59.560 43.478 0.00 0.00 0.00 2.44
4171 4514 4.082787 CGCAGCTAATTCTTCCCTCAAAAA 60.083 41.667 0.00 0.00 0.00 1.94
4188 4531 2.634639 AAAATTACCCCTTCCCCACC 57.365 50.000 0.00 0.00 0.00 4.61
4189 4532 0.714180 AAATTACCCCTTCCCCACCC 59.286 55.000 0.00 0.00 0.00 4.61
4190 4533 1.226104 AATTACCCCTTCCCCACCCC 61.226 60.000 0.00 0.00 0.00 4.95
4191 4534 3.914521 TTACCCCTTCCCCACCCCC 62.915 68.421 0.00 0.00 0.00 5.40
4196 4539 4.693915 CTTCCCCACCCCCTCCCA 62.694 72.222 0.00 0.00 0.00 4.37
4197 4540 4.224971 TTCCCCACCCCCTCCCAA 62.225 66.667 0.00 0.00 0.00 4.12
4198 4541 3.777522 TTCCCCACCCCCTCCCAAA 62.778 63.158 0.00 0.00 0.00 3.28
4199 4542 2.952359 CCCCACCCCCTCCCAAAT 60.952 66.667 0.00 0.00 0.00 2.32
4200 4543 2.566903 CCCCACCCCCTCCCAAATT 61.567 63.158 0.00 0.00 0.00 1.82
4201 4544 1.473844 CCCACCCCCTCCCAAATTT 59.526 57.895 0.00 0.00 0.00 1.82
4202 4545 0.713579 CCCACCCCCTCCCAAATTTA 59.286 55.000 0.00 0.00 0.00 1.40
4203 4546 1.079658 CCCACCCCCTCCCAAATTTAA 59.920 52.381 0.00 0.00 0.00 1.52
4204 4547 2.293519 CCCACCCCCTCCCAAATTTAAT 60.294 50.000 0.00 0.00 0.00 1.40
4205 4548 3.459828 CCACCCCCTCCCAAATTTAATT 58.540 45.455 0.00 0.00 0.00 1.40
4206 4549 3.849574 CCACCCCCTCCCAAATTTAATTT 59.150 43.478 0.00 0.00 0.00 1.82
4207 4550 5.033522 CCACCCCCTCCCAAATTTAATTTA 58.966 41.667 2.37 0.00 0.00 1.40
4208 4551 5.669904 CCACCCCCTCCCAAATTTAATTTAT 59.330 40.000 2.37 0.00 0.00 1.40
4209 4552 6.847036 CCACCCCCTCCCAAATTTAATTTATA 59.153 38.462 2.37 0.00 0.00 0.98
4210 4553 7.202056 CCACCCCCTCCCAAATTTAATTTATAC 60.202 40.741 2.37 0.00 0.00 1.47
4211 4554 7.567250 CACCCCCTCCCAAATTTAATTTATACT 59.433 37.037 2.37 0.00 0.00 2.12
4212 4555 8.803636 ACCCCCTCCCAAATTTAATTTATACTA 58.196 33.333 2.37 0.00 0.00 1.82
4213 4556 9.837681 CCCCCTCCCAAATTTAATTTATACTAT 57.162 33.333 2.37 0.00 0.00 2.12
4235 4578 8.756927 ACTATCACTACTTACTAGTTTTTCCCC 58.243 37.037 0.00 0.00 32.90 4.81
4236 4579 6.999705 TCACTACTTACTAGTTTTTCCCCA 57.000 37.500 0.00 0.00 32.90 4.96
4237 4580 7.001099 TCACTACTTACTAGTTTTTCCCCAG 57.999 40.000 0.00 0.00 32.90 4.45
4238 4581 6.783977 TCACTACTTACTAGTTTTTCCCCAGA 59.216 38.462 0.00 0.00 32.90 3.86
4239 4582 7.456902 TCACTACTTACTAGTTTTTCCCCAGAT 59.543 37.037 0.00 0.00 32.90 2.90
4240 4583 7.764901 CACTACTTACTAGTTTTTCCCCAGATC 59.235 40.741 0.00 0.00 32.90 2.75
4241 4584 6.063496 ACTTACTAGTTTTTCCCCAGATCC 57.937 41.667 0.00 0.00 0.00 3.36
4242 4585 5.550403 ACTTACTAGTTTTTCCCCAGATCCA 59.450 40.000 0.00 0.00 0.00 3.41
4243 4586 4.302559 ACTAGTTTTTCCCCAGATCCAC 57.697 45.455 0.00 0.00 0.00 4.02
4244 4587 2.604912 AGTTTTTCCCCAGATCCACC 57.395 50.000 0.00 0.00 0.00 4.61
4245 4588 1.077169 AGTTTTTCCCCAGATCCACCC 59.923 52.381 0.00 0.00 0.00 4.61
4246 4589 0.411848 TTTTTCCCCAGATCCACCCC 59.588 55.000 0.00 0.00 0.00 4.95
4247 4590 1.514864 TTTTCCCCAGATCCACCCCC 61.515 60.000 0.00 0.00 0.00 5.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 4.037923 TGATGAAACTTTCAGGAGCCAAAC 59.962 41.667 9.97 0.00 43.98 2.93
36 37 9.858247 CAATGAAAACATTGATGAAACTTTCAG 57.142 29.630 15.08 0.00 43.26 3.02
131 132 7.722728 CCCTTTCCATCATCTTATTTCTCATGA 59.277 37.037 0.00 0.00 0.00 3.07
133 134 7.819500 TCCCTTTCCATCATCTTATTTCTCAT 58.180 34.615 0.00 0.00 0.00 2.90
137 138 6.435591 GGGATCCCTTTCCATCATCTTATTTC 59.564 42.308 24.69 0.00 37.53 2.17
143 144 2.793017 TGGGATCCCTTTCCATCATCT 58.207 47.619 31.05 0.00 37.53 2.90
211 212 9.410556 CGTTTCCATCCATCCATTTATTTTATC 57.589 33.333 0.00 0.00 0.00 1.75
239 240 4.825546 ATCAATCGGCAATTCACATCTC 57.174 40.909 0.00 0.00 0.00 2.75
246 247 3.378112 TCTGTGGAATCAATCGGCAATTC 59.622 43.478 0.00 0.00 0.00 2.17
251 364 2.352960 GTCTTCTGTGGAATCAATCGGC 59.647 50.000 0.00 0.00 0.00 5.54
279 392 6.162079 TGTGCTCTGTGATTTCAAAACAAAA 58.838 32.000 0.00 0.00 0.00 2.44
280 393 5.718146 TGTGCTCTGTGATTTCAAAACAAA 58.282 33.333 0.00 0.00 0.00 2.83
281 394 5.321959 TGTGCTCTGTGATTTCAAAACAA 57.678 34.783 0.00 0.00 0.00 2.83
282 395 4.979943 TGTGCTCTGTGATTTCAAAACA 57.020 36.364 0.00 0.00 0.00 2.83
283 396 4.741676 CCTTGTGCTCTGTGATTTCAAAAC 59.258 41.667 0.00 0.00 0.00 2.43
284 397 4.402155 ACCTTGTGCTCTGTGATTTCAAAA 59.598 37.500 0.00 0.00 0.00 2.44
286 399 3.554934 ACCTTGTGCTCTGTGATTTCAA 58.445 40.909 0.00 0.00 0.00 2.69
287 400 3.213206 ACCTTGTGCTCTGTGATTTCA 57.787 42.857 0.00 0.00 0.00 2.69
288 401 3.817647 AGAACCTTGTGCTCTGTGATTTC 59.182 43.478 0.00 0.00 0.00 2.17
289 402 3.825328 AGAACCTTGTGCTCTGTGATTT 58.175 40.909 0.00 0.00 0.00 2.17
290 403 3.498774 AGAACCTTGTGCTCTGTGATT 57.501 42.857 0.00 0.00 0.00 2.57
291 404 4.623932 TTAGAACCTTGTGCTCTGTGAT 57.376 40.909 0.00 0.00 0.00 3.06
292 405 4.415881 TTTAGAACCTTGTGCTCTGTGA 57.584 40.909 0.00 0.00 0.00 3.58
293 406 4.614535 GCATTTAGAACCTTGTGCTCTGTG 60.615 45.833 0.00 0.00 0.00 3.66
294 407 3.503748 GCATTTAGAACCTTGTGCTCTGT 59.496 43.478 0.00 0.00 0.00 3.41
295 408 3.503363 TGCATTTAGAACCTTGTGCTCTG 59.497 43.478 0.00 0.00 33.95 3.35
296 409 3.754965 TGCATTTAGAACCTTGTGCTCT 58.245 40.909 0.00 0.00 33.95 4.09
297 410 4.503741 TTGCATTTAGAACCTTGTGCTC 57.496 40.909 0.00 0.00 33.95 4.26
298 411 4.935352 TTTGCATTTAGAACCTTGTGCT 57.065 36.364 0.00 0.00 33.95 4.40
299 412 5.982465 TTTTTGCATTTAGAACCTTGTGC 57.018 34.783 0.00 0.00 0.00 4.57
318 431 4.646492 AGCCAATTCTCTCTGTGTGTTTTT 59.354 37.500 0.00 0.00 0.00 1.94
319 432 4.210331 AGCCAATTCTCTCTGTGTGTTTT 58.790 39.130 0.00 0.00 0.00 2.43
320 433 3.817647 GAGCCAATTCTCTCTGTGTGTTT 59.182 43.478 0.00 0.00 0.00 2.83
321 434 3.181451 TGAGCCAATTCTCTCTGTGTGTT 60.181 43.478 5.41 0.00 34.29 3.32
322 435 2.369860 TGAGCCAATTCTCTCTGTGTGT 59.630 45.455 5.41 0.00 34.29 3.72
323 436 3.049708 TGAGCCAATTCTCTCTGTGTG 57.950 47.619 5.41 0.00 34.29 3.82
324 437 3.406764 GTTGAGCCAATTCTCTCTGTGT 58.593 45.455 5.41 0.00 34.29 3.72
325 438 2.746362 GGTTGAGCCAATTCTCTCTGTG 59.254 50.000 5.41 0.00 37.17 3.66
326 439 2.613977 CGGTTGAGCCAATTCTCTCTGT 60.614 50.000 5.41 0.00 36.97 3.41
327 440 2.005451 CGGTTGAGCCAATTCTCTCTG 58.995 52.381 5.41 0.00 36.97 3.35
328 441 1.625818 ACGGTTGAGCCAATTCTCTCT 59.374 47.619 5.41 0.00 36.97 3.10
329 442 1.734465 CACGGTTGAGCCAATTCTCTC 59.266 52.381 0.00 0.00 36.97 3.20
506 619 1.158434 TTTATCGCCCGGTGTGTTTC 58.842 50.000 0.00 0.00 0.00 2.78
549 666 5.178067 GGTGAGAACGGTAAAAAGAAATCGA 59.822 40.000 0.00 0.00 0.00 3.59
562 679 1.228154 GGCTTTGGGTGAGAACGGT 60.228 57.895 0.00 0.00 0.00 4.83
563 680 0.821711 TTGGCTTTGGGTGAGAACGG 60.822 55.000 0.00 0.00 0.00 4.44
565 682 3.535280 TTTTTGGCTTTGGGTGAGAAC 57.465 42.857 0.00 0.00 0.00 3.01
701 849 2.207924 CGGGCCGGGAGCTAGTAAT 61.208 63.158 20.56 0.00 43.05 1.89
703 851 4.908487 CCGGGCCGGGAGCTAGTA 62.908 72.222 37.27 0.00 44.15 1.82
821 971 1.888172 TAACGTTGGTGGTGTGCGG 60.888 57.895 11.99 0.00 0.00 5.69
827 977 1.068895 TGTCATCGTAACGTTGGTGGT 59.931 47.619 11.99 0.00 0.00 4.16
858 1008 8.704849 TTATAGAGGAGGAGAAGAGATTTGAG 57.295 38.462 0.00 0.00 0.00 3.02
866 1016 6.242396 CGGAGATTTATAGAGGAGGAGAAGA 58.758 44.000 0.00 0.00 0.00 2.87
868 1018 4.767928 GCGGAGATTTATAGAGGAGGAGAA 59.232 45.833 0.00 0.00 0.00 2.87
1098 1252 3.398353 GACGTTCTCGGAGCCCTCG 62.398 68.421 0.00 5.02 41.85 4.63
1196 1356 3.423154 CGAAGGCGGGCTTCACAC 61.423 66.667 34.21 15.66 0.00 3.82
1281 1441 1.101635 TTCTCGGCGTCCTCGATGAT 61.102 55.000 6.85 0.00 39.71 2.45
1321 1481 0.658897 GTCGAGCTCTTCCTAGACGG 59.341 60.000 12.85 0.00 29.96 4.79
1659 1822 1.668101 CCTTCTTCCTCCTCGTCCCG 61.668 65.000 0.00 0.00 0.00 5.14
1868 2037 7.225341 TGGATTCATCACGAGAAGATTTACATG 59.775 37.037 0.00 0.00 0.00 3.21
1888 2057 1.077930 TGCTGCTCCTGCTGGATTC 60.078 57.895 13.33 8.70 42.29 2.52
1994 2163 5.007626 ACGTATCCACAAAATTCATCGATGG 59.992 40.000 24.61 10.25 0.00 3.51
1996 2165 6.538742 AGAACGTATCCACAAAATTCATCGAT 59.461 34.615 0.00 0.00 0.00 3.59
2141 2310 8.700051 GGATACTACATATATGGATGAACTGCT 58.300 37.037 16.96 0.00 0.00 4.24
2143 2312 8.981659 TGGGATACTACATATATGGATGAACTG 58.018 37.037 16.96 0.00 0.00 3.16
2232 2402 0.402121 AGTTGCCTTCCTTCACCCTC 59.598 55.000 0.00 0.00 0.00 4.30
2350 2520 1.455786 CAGTGTGATCGTGGTTCGTTC 59.544 52.381 0.00 0.00 40.80 3.95
2388 2558 5.237561 TCATTGCTCTAGCGAAGTAGAGTAG 59.762 44.000 14.69 4.44 45.50 2.57
2390 2560 3.948473 TCATTGCTCTAGCGAAGTAGAGT 59.052 43.478 14.69 0.00 45.50 3.24
2391 2561 4.536065 CTCATTGCTCTAGCGAAGTAGAG 58.464 47.826 10.87 10.87 46.20 2.43
2392 2562 3.243234 GCTCATTGCTCTAGCGAAGTAGA 60.243 47.826 0.00 0.00 45.83 2.59
2393 2563 3.049206 GCTCATTGCTCTAGCGAAGTAG 58.951 50.000 0.00 0.00 45.83 2.57
2394 2564 2.427095 TGCTCATTGCTCTAGCGAAGTA 59.573 45.455 0.00 0.00 45.83 2.24
2395 2565 1.205655 TGCTCATTGCTCTAGCGAAGT 59.794 47.619 0.00 0.00 45.83 3.01
2396 2566 1.931906 TGCTCATTGCTCTAGCGAAG 58.068 50.000 0.00 0.00 45.83 3.79
2398 2568 1.410153 TCATGCTCATTGCTCTAGCGA 59.590 47.619 0.00 0.00 45.83 4.93
2432 2610 9.174166 TGAAGAGCTAACTTTTTCAGTTTAACT 57.826 29.630 0.00 0.00 43.89 2.24
2490 2669 4.099881 ACATGTTTTGCTGGTTTCAGTGAT 59.900 37.500 0.00 0.00 42.78 3.06
2627 2941 4.717629 TTGGAGCGACCGACAGCG 62.718 66.667 0.00 0.00 42.61 5.18
2676 2990 5.880054 AACTCTGTTACCATGCAATGTAC 57.120 39.130 0.00 0.00 44.81 2.90
2677 2991 6.294453 CCAAAACTCTGTTACCATGCAATGTA 60.294 38.462 0.00 0.00 44.81 2.29
2678 2992 5.509501 CCAAAACTCTGTTACCATGCAATGT 60.510 40.000 0.00 0.00 44.81 2.71
2758 3073 2.356793 CCGCGATCTGCAGGATCC 60.357 66.667 15.13 2.48 45.90 3.36
2760 3075 2.733301 CTCCGCGATCTGCAGGAT 59.267 61.111 15.13 6.11 46.97 3.24
2835 3150 3.194861 CAACAAGTCTCGGTTCAGTTGA 58.805 45.455 0.00 0.00 37.62 3.18
2839 3154 2.135933 GGACAACAAGTCTCGGTTCAG 58.864 52.381 0.00 0.00 46.72 3.02
2894 3224 2.423446 TGCATGCCACATGTCACTAT 57.577 45.000 16.68 0.00 0.00 2.12
2895 3225 2.423446 ATGCATGCCACATGTCACTA 57.577 45.000 16.68 0.00 0.00 2.74
2896 3226 1.552578 AATGCATGCCACATGTCACT 58.447 45.000 16.68 0.00 0.00 3.41
2897 3227 2.094390 AGAAATGCATGCCACATGTCAC 60.094 45.455 16.68 0.00 34.70 3.67
2898 3228 2.172679 AGAAATGCATGCCACATGTCA 58.827 42.857 16.68 7.95 34.70 3.58
2899 3229 2.953466 AGAAATGCATGCCACATGTC 57.047 45.000 16.68 6.90 32.76 3.06
2900 3230 3.688694 AAAGAAATGCATGCCACATGT 57.311 38.095 16.68 0.00 0.00 3.21
2901 3231 3.749088 ACAAAAGAAATGCATGCCACATG 59.251 39.130 16.68 3.18 0.00 3.21
2945 3275 3.668447 TCCTCAGCAGTTTGATCTCAAC 58.332 45.455 0.00 0.00 35.28 3.18
3044 3374 8.212995 TGGAGCATGATCATGATAGTAGAAAAA 58.787 33.333 34.65 8.02 41.20 1.94
3049 3379 7.414208 GCAAATGGAGCATGATCATGATAGTAG 60.414 40.741 34.65 18.97 41.20 2.57
3050 3380 6.373495 GCAAATGGAGCATGATCATGATAGTA 59.627 38.462 34.65 19.89 41.20 1.82
3051 3381 5.183331 GCAAATGGAGCATGATCATGATAGT 59.817 40.000 34.65 14.54 41.20 2.12
3054 3384 3.057526 CGCAAATGGAGCATGATCATGAT 60.058 43.478 34.65 30.51 41.20 2.45
3056 3386 2.034179 ACGCAAATGGAGCATGATCATG 59.966 45.455 28.04 28.04 41.60 3.07
3075 3405 2.669924 CCACAGTTCATGTCTCATCACG 59.330 50.000 0.00 0.00 41.41 4.35
3278 3612 4.163458 ACTTGTCCTGTGACCAAGTCTTTA 59.837 41.667 0.00 0.00 41.01 1.85
3279 3613 3.054361 ACTTGTCCTGTGACCAAGTCTTT 60.054 43.478 0.00 0.00 41.01 2.52
3393 3727 8.522830 CATGTTTGATACTACAAAAGGATTGGT 58.477 33.333 0.00 0.00 40.62 3.67
3400 3734 8.993121 ACAGAGACATGTTTGATACTACAAAAG 58.007 33.333 0.00 0.00 40.62 2.27
3446 3782 3.308595 CACAGTTTAACAGCTGACGTCAA 59.691 43.478 23.35 0.00 36.62 3.18
3450 3786 4.923871 AGATACACAGTTTAACAGCTGACG 59.076 41.667 23.35 7.09 36.62 4.35
3466 3802 6.901887 CACAAATCGCTCATGTTTAGATACAC 59.098 38.462 0.00 0.00 0.00 2.90
3532 3868 4.327854 CGACAAGCAAGACAAGTTATCC 57.672 45.455 0.00 0.00 0.00 2.59
3569 3905 1.667724 CTGCTGTCGAAATCACATCCC 59.332 52.381 0.00 0.00 0.00 3.85
3574 3910 2.224079 TGCTTTCTGCTGTCGAAATCAC 59.776 45.455 0.00 0.00 43.37 3.06
3581 3919 1.135575 GGGAAATGCTTTCTGCTGTCG 60.136 52.381 8.05 0.00 43.37 4.35
3737 4076 2.342406 TCCCTCCAGAAATGGACAGA 57.658 50.000 0.00 0.00 33.77 3.41
3780 4119 6.526566 CTAGCATAGTAAAACCGGATGAAC 57.473 41.667 9.46 0.37 32.85 3.18
3795 4134 8.748412 AGCTTCTTGAATCCTATACTAGCATAG 58.252 37.037 3.27 3.27 46.50 2.23
3797 4136 7.385267 CAGCTTCTTGAATCCTATACTAGCAT 58.615 38.462 0.00 0.00 0.00 3.79
3799 4138 6.162777 CCAGCTTCTTGAATCCTATACTAGC 58.837 44.000 0.00 0.00 0.00 3.42
3800 4139 6.268847 ACCCAGCTTCTTGAATCCTATACTAG 59.731 42.308 0.00 0.00 0.00 2.57
3801 4140 6.042093 CACCCAGCTTCTTGAATCCTATACTA 59.958 42.308 0.00 0.00 0.00 1.82
3802 4141 4.971924 ACCCAGCTTCTTGAATCCTATACT 59.028 41.667 0.00 0.00 0.00 2.12
3839 4182 9.565090 AATCTCAGACAATGCTAAGCAATAATA 57.435 29.630 0.00 0.00 43.62 0.98
3840 4183 8.461249 AATCTCAGACAATGCTAAGCAATAAT 57.539 30.769 0.00 0.00 43.62 1.28
3841 4184 7.772292 AGAATCTCAGACAATGCTAAGCAATAA 59.228 33.333 0.00 0.00 43.62 1.40
3842 4185 7.226128 CAGAATCTCAGACAATGCTAAGCAATA 59.774 37.037 0.00 0.00 43.62 1.90
3843 4186 6.038382 CAGAATCTCAGACAATGCTAAGCAAT 59.962 38.462 0.00 0.00 43.62 3.56
3844 4187 5.353400 CAGAATCTCAGACAATGCTAAGCAA 59.647 40.000 0.00 0.00 43.62 3.91
3845 4188 4.874396 CAGAATCTCAGACAATGCTAAGCA 59.126 41.667 0.00 0.00 44.86 3.91
3846 4189 5.114780 TCAGAATCTCAGACAATGCTAAGC 58.885 41.667 0.00 0.00 0.00 3.09
3847 4190 6.258287 CCTTCAGAATCTCAGACAATGCTAAG 59.742 42.308 0.00 0.00 0.00 2.18
3848 4191 6.111382 CCTTCAGAATCTCAGACAATGCTAA 58.889 40.000 0.00 0.00 0.00 3.09
3849 4192 5.396101 CCCTTCAGAATCTCAGACAATGCTA 60.396 44.000 0.00 0.00 0.00 3.49
3850 4193 4.515361 CCTTCAGAATCTCAGACAATGCT 58.485 43.478 0.00 0.00 0.00 3.79
3851 4194 3.626670 CCCTTCAGAATCTCAGACAATGC 59.373 47.826 0.00 0.00 0.00 3.56
3852 4195 4.634883 CACCCTTCAGAATCTCAGACAATG 59.365 45.833 0.00 0.00 0.00 2.82
3853 4196 4.841422 CACCCTTCAGAATCTCAGACAAT 58.159 43.478 0.00 0.00 0.00 2.71
3854 4197 3.557898 GCACCCTTCAGAATCTCAGACAA 60.558 47.826 0.00 0.00 0.00 3.18
3855 4198 2.027745 GCACCCTTCAGAATCTCAGACA 60.028 50.000 0.00 0.00 0.00 3.41
3856 4199 2.235898 AGCACCCTTCAGAATCTCAGAC 59.764 50.000 0.00 0.00 0.00 3.51
3857 4200 2.235650 CAGCACCCTTCAGAATCTCAGA 59.764 50.000 0.00 0.00 0.00 3.27
3858 4201 2.027377 ACAGCACCCTTCAGAATCTCAG 60.027 50.000 0.00 0.00 0.00 3.35
3859 4202 1.980765 ACAGCACCCTTCAGAATCTCA 59.019 47.619 0.00 0.00 0.00 3.27
3860 4203 2.289945 ACACAGCACCCTTCAGAATCTC 60.290 50.000 0.00 0.00 0.00 2.75
3861 4204 1.701847 ACACAGCACCCTTCAGAATCT 59.298 47.619 0.00 0.00 0.00 2.40
3862 4205 1.808945 CACACAGCACCCTTCAGAATC 59.191 52.381 0.00 0.00 0.00 2.52
3863 4206 1.546323 CCACACAGCACCCTTCAGAAT 60.546 52.381 0.00 0.00 0.00 2.40
3864 4207 0.179020 CCACACAGCACCCTTCAGAA 60.179 55.000 0.00 0.00 0.00 3.02
3865 4208 1.344953 ACCACACAGCACCCTTCAGA 61.345 55.000 0.00 0.00 0.00 3.27
3866 4209 0.466189 AACCACACAGCACCCTTCAG 60.466 55.000 0.00 0.00 0.00 3.02
3867 4210 0.465460 GAACCACACAGCACCCTTCA 60.465 55.000 0.00 0.00 0.00 3.02
3868 4211 0.465460 TGAACCACACAGCACCCTTC 60.465 55.000 0.00 0.00 0.00 3.46
3869 4212 0.185901 ATGAACCACACAGCACCCTT 59.814 50.000 0.00 0.00 0.00 3.95
3870 4213 1.064003 TATGAACCACACAGCACCCT 58.936 50.000 0.00 0.00 0.00 4.34
3871 4214 1.165270 GTATGAACCACACAGCACCC 58.835 55.000 0.00 0.00 0.00 4.61
3872 4215 1.806542 CTGTATGAACCACACAGCACC 59.193 52.381 0.00 0.00 33.86 5.01
3873 4216 2.494059 ACTGTATGAACCACACAGCAC 58.506 47.619 5.40 0.00 42.76 4.40
3874 4217 2.928801 ACTGTATGAACCACACAGCA 57.071 45.000 5.40 0.00 42.76 4.41
3875 4218 3.315191 ACAAACTGTATGAACCACACAGC 59.685 43.478 5.40 0.00 42.76 4.40
3876 4219 4.574421 TGACAAACTGTATGAACCACACAG 59.426 41.667 4.06 4.06 44.20 3.66
3877 4220 4.334203 GTGACAAACTGTATGAACCACACA 59.666 41.667 0.00 0.00 0.00 3.72
3878 4221 4.574828 AGTGACAAACTGTATGAACCACAC 59.425 41.667 0.00 0.00 37.88 3.82
3879 4222 4.776349 AGTGACAAACTGTATGAACCACA 58.224 39.130 0.00 0.00 37.88 4.17
3880 4223 5.065988 ACAAGTGACAAACTGTATGAACCAC 59.934 40.000 0.00 0.00 39.81 4.16
3881 4224 5.189928 ACAAGTGACAAACTGTATGAACCA 58.810 37.500 0.00 0.00 39.81 3.67
3882 4225 5.558273 CGACAAGTGACAAACTGTATGAACC 60.558 44.000 0.00 0.00 39.81 3.62
3883 4226 5.233476 TCGACAAGTGACAAACTGTATGAAC 59.767 40.000 0.00 0.00 39.81 3.18
3884 4227 5.353111 TCGACAAGTGACAAACTGTATGAA 58.647 37.500 0.00 0.00 39.81 2.57
3885 4228 4.939271 TCGACAAGTGACAAACTGTATGA 58.061 39.130 0.00 0.00 39.81 2.15
3886 4229 5.845985 ATCGACAAGTGACAAACTGTATG 57.154 39.130 0.00 0.00 39.81 2.39
3887 4230 6.071560 TCCTATCGACAAGTGACAAACTGTAT 60.072 38.462 0.00 0.00 39.81 2.29
3888 4231 5.242171 TCCTATCGACAAGTGACAAACTGTA 59.758 40.000 0.00 0.00 39.81 2.74
3889 4232 4.038763 TCCTATCGACAAGTGACAAACTGT 59.961 41.667 0.00 0.00 39.81 3.55
3890 4233 4.556233 TCCTATCGACAAGTGACAAACTG 58.444 43.478 0.00 0.00 39.81 3.16
3891 4234 4.866508 TCCTATCGACAAGTGACAAACT 57.133 40.909 0.00 0.00 42.60 2.66
3892 4235 4.143094 GCTTCCTATCGACAAGTGACAAAC 60.143 45.833 0.00 0.00 0.00 2.93
3893 4236 3.994392 GCTTCCTATCGACAAGTGACAAA 59.006 43.478 0.00 0.00 0.00 2.83
3894 4237 3.585862 GCTTCCTATCGACAAGTGACAA 58.414 45.455 0.00 0.00 0.00 3.18
3895 4238 2.094182 GGCTTCCTATCGACAAGTGACA 60.094 50.000 0.00 0.00 0.00 3.58
3896 4239 2.166664 AGGCTTCCTATCGACAAGTGAC 59.833 50.000 0.00 0.00 28.47 3.67
3897 4240 2.166459 CAGGCTTCCTATCGACAAGTGA 59.834 50.000 0.00 0.00 29.64 3.41
3898 4241 2.544685 CAGGCTTCCTATCGACAAGTG 58.455 52.381 0.00 0.00 29.64 3.16
3899 4242 1.482593 CCAGGCTTCCTATCGACAAGT 59.517 52.381 0.00 0.00 29.64 3.16
3900 4243 1.757118 TCCAGGCTTCCTATCGACAAG 59.243 52.381 0.00 0.00 29.64 3.16
3901 4244 1.860641 TCCAGGCTTCCTATCGACAA 58.139 50.000 0.00 0.00 29.64 3.18
3902 4245 1.757118 CTTCCAGGCTTCCTATCGACA 59.243 52.381 0.00 0.00 29.64 4.35
3903 4246 1.757699 ACTTCCAGGCTTCCTATCGAC 59.242 52.381 0.00 0.00 29.64 4.20
3904 4247 2.160721 ACTTCCAGGCTTCCTATCGA 57.839 50.000 0.00 0.00 29.64 3.59
3905 4248 2.483889 GGAACTTCCAGGCTTCCTATCG 60.484 54.545 2.62 0.00 36.28 2.92
3906 4249 2.158740 GGGAACTTCCAGGCTTCCTATC 60.159 54.545 10.11 0.00 38.64 2.08
3907 4250 1.847088 GGGAACTTCCAGGCTTCCTAT 59.153 52.381 10.11 0.00 38.64 2.57
3908 4251 1.286248 GGGAACTTCCAGGCTTCCTA 58.714 55.000 10.11 0.00 38.64 2.94
3909 4252 0.772124 TGGGAACTTCCAGGCTTCCT 60.772 55.000 10.11 0.00 38.64 3.36
3910 4253 0.332972 ATGGGAACTTCCAGGCTTCC 59.667 55.000 10.11 2.89 40.56 3.46
3911 4254 1.756430 GATGGGAACTTCCAGGCTTC 58.244 55.000 10.11 0.00 40.56 3.86
3912 4255 3.987594 GATGGGAACTTCCAGGCTT 57.012 52.632 10.11 0.00 40.56 4.35
3919 4262 1.002087 ACTGTCGTGGATGGGAACTTC 59.998 52.381 0.00 0.00 0.00 3.01
3920 4263 1.056660 ACTGTCGTGGATGGGAACTT 58.943 50.000 0.00 0.00 0.00 2.66
3921 4264 0.321671 CACTGTCGTGGATGGGAACT 59.678 55.000 0.00 0.00 37.50 3.01
3922 4265 0.034896 ACACTGTCGTGGATGGGAAC 59.965 55.000 0.00 0.00 45.50 3.62
3923 4266 0.320374 GACACTGTCGTGGATGGGAA 59.680 55.000 0.00 0.00 45.50 3.97
3924 4267 1.541310 GGACACTGTCGTGGATGGGA 61.541 60.000 3.04 0.00 45.50 4.37
3925 4268 1.079127 GGACACTGTCGTGGATGGG 60.079 63.158 3.04 0.00 45.50 4.00
3926 4269 0.034756 TTGGACACTGTCGTGGATGG 59.965 55.000 3.04 0.00 45.50 3.51
3927 4270 2.099141 ATTGGACACTGTCGTGGATG 57.901 50.000 3.04 0.00 45.50 3.51
3928 4271 2.832129 ACTATTGGACACTGTCGTGGAT 59.168 45.455 3.04 0.00 45.50 3.41
3929 4272 2.029380 CACTATTGGACACTGTCGTGGA 60.029 50.000 3.04 0.00 45.50 4.02
3930 4273 2.288825 ACACTATTGGACACTGTCGTGG 60.289 50.000 14.75 5.05 45.50 4.94
3931 4274 3.026630 ACACTATTGGACACTGTCGTG 57.973 47.619 10.78 10.78 46.63 4.35
3932 4275 4.461431 TCATACACTATTGGACACTGTCGT 59.539 41.667 3.04 0.00 32.65 4.34
3933 4276 4.798907 GTCATACACTATTGGACACTGTCG 59.201 45.833 3.04 0.00 32.65 4.35
3934 4277 5.109903 GGTCATACACTATTGGACACTGTC 58.890 45.833 0.00 0.00 0.00 3.51
3935 4278 4.081087 GGGTCATACACTATTGGACACTGT 60.081 45.833 0.00 0.00 0.00 3.55
3936 4279 4.081142 TGGGTCATACACTATTGGACACTG 60.081 45.833 0.00 0.00 33.18 3.66
3937 4280 4.101114 TGGGTCATACACTATTGGACACT 58.899 43.478 0.00 0.00 33.18 3.55
3938 4281 4.481368 TGGGTCATACACTATTGGACAC 57.519 45.455 0.00 0.00 32.63 3.67
3939 4282 5.708736 ATTGGGTCATACACTATTGGACA 57.291 39.130 0.00 0.00 0.00 4.02
3940 4283 6.706270 CACTATTGGGTCATACACTATTGGAC 59.294 42.308 0.00 0.00 0.00 4.02
3941 4284 6.613679 TCACTATTGGGTCATACACTATTGGA 59.386 38.462 0.00 0.00 0.00 3.53
3942 4285 6.826668 TCACTATTGGGTCATACACTATTGG 58.173 40.000 0.00 0.00 0.00 3.16
3943 4286 8.150296 TCATCACTATTGGGTCATACACTATTG 58.850 37.037 0.00 0.00 0.00 1.90
3944 4287 8.262601 TCATCACTATTGGGTCATACACTATT 57.737 34.615 0.00 0.00 0.00 1.73
3945 4288 7.855784 TCATCACTATTGGGTCATACACTAT 57.144 36.000 0.00 0.00 0.00 2.12
3946 4289 7.855784 ATCATCACTATTGGGTCATACACTA 57.144 36.000 0.00 0.00 0.00 2.74
3947 4290 6.753913 ATCATCACTATTGGGTCATACACT 57.246 37.500 0.00 0.00 0.00 3.55
3948 4291 9.809096 CTATATCATCACTATTGGGTCATACAC 57.191 37.037 0.00 0.00 0.00 2.90
3949 4292 8.478066 GCTATATCATCACTATTGGGTCATACA 58.522 37.037 0.00 0.00 0.00 2.29
3950 4293 8.700051 AGCTATATCATCACTATTGGGTCATAC 58.300 37.037 0.00 0.00 0.00 2.39
3951 4294 8.844865 AGCTATATCATCACTATTGGGTCATA 57.155 34.615 0.00 0.00 0.00 2.15
3952 4295 7.746243 AGCTATATCATCACTATTGGGTCAT 57.254 36.000 0.00 0.00 0.00 3.06
3953 4296 7.559335 AAGCTATATCATCACTATTGGGTCA 57.441 36.000 0.00 0.00 0.00 4.02
3954 4297 8.754080 AGTAAGCTATATCATCACTATTGGGTC 58.246 37.037 0.00 0.00 0.00 4.46
3955 4298 8.671987 AGTAAGCTATATCATCACTATTGGGT 57.328 34.615 0.00 0.00 0.00 4.51
3956 4299 7.918033 CGAGTAAGCTATATCATCACTATTGGG 59.082 40.741 0.00 0.00 0.00 4.12
3957 4300 7.918033 CCGAGTAAGCTATATCATCACTATTGG 59.082 40.741 0.00 0.00 0.00 3.16
3958 4301 7.433719 GCCGAGTAAGCTATATCATCACTATTG 59.566 40.741 0.00 0.00 0.00 1.90
3959 4302 7.122799 TGCCGAGTAAGCTATATCATCACTATT 59.877 37.037 0.00 0.00 0.00 1.73
3960 4303 6.603599 TGCCGAGTAAGCTATATCATCACTAT 59.396 38.462 0.00 0.00 0.00 2.12
3961 4304 5.944007 TGCCGAGTAAGCTATATCATCACTA 59.056 40.000 0.00 0.00 0.00 2.74
3962 4305 4.767409 TGCCGAGTAAGCTATATCATCACT 59.233 41.667 0.00 0.00 0.00 3.41
3963 4306 5.060662 TGCCGAGTAAGCTATATCATCAC 57.939 43.478 0.00 0.00 0.00 3.06
3964 4307 5.722021 TTGCCGAGTAAGCTATATCATCA 57.278 39.130 0.00 0.00 0.00 3.07
3965 4308 6.697892 GGTATTGCCGAGTAAGCTATATCATC 59.302 42.308 0.00 0.00 31.82 2.92
3966 4309 6.407074 GGGTATTGCCGAGTAAGCTATATCAT 60.407 42.308 0.00 0.00 38.44 2.45
3967 4310 5.105473 GGGTATTGCCGAGTAAGCTATATCA 60.105 44.000 0.00 0.00 38.44 2.15
3968 4311 5.105473 TGGGTATTGCCGAGTAAGCTATATC 60.105 44.000 0.00 0.00 38.44 1.63
3969 4312 4.775780 TGGGTATTGCCGAGTAAGCTATAT 59.224 41.667 0.00 0.00 38.44 0.86
3970 4313 4.154176 TGGGTATTGCCGAGTAAGCTATA 58.846 43.478 0.00 0.00 38.44 1.31
3971 4314 2.969950 TGGGTATTGCCGAGTAAGCTAT 59.030 45.455 0.00 0.00 38.44 2.97
3972 4315 2.390696 TGGGTATTGCCGAGTAAGCTA 58.609 47.619 0.00 0.00 38.44 3.32
3973 4316 1.200519 TGGGTATTGCCGAGTAAGCT 58.799 50.000 0.00 0.00 38.44 3.74
3974 4317 2.032680 TTGGGTATTGCCGAGTAAGC 57.967 50.000 0.00 0.00 38.44 3.09
3975 4318 3.746492 GCTATTGGGTATTGCCGAGTAAG 59.254 47.826 0.00 0.00 38.44 2.34
3976 4319 3.735591 GCTATTGGGTATTGCCGAGTAA 58.264 45.455 0.00 0.00 38.44 2.24
3977 4320 2.288579 CGCTATTGGGTATTGCCGAGTA 60.289 50.000 0.00 0.00 38.44 2.59
3978 4321 1.540363 CGCTATTGGGTATTGCCGAGT 60.540 52.381 0.00 0.00 38.44 4.18
3979 4322 1.148310 CGCTATTGGGTATTGCCGAG 58.852 55.000 0.00 0.00 38.44 4.63
3980 4323 0.466543 ACGCTATTGGGTATTGCCGA 59.533 50.000 0.00 0.00 37.60 5.54
3981 4324 2.157834 TACGCTATTGGGTATTGCCG 57.842 50.000 0.05 0.00 40.03 5.69
3982 4325 3.435671 GTCATACGCTATTGGGTATTGCC 59.564 47.826 12.88 2.77 45.95 4.52
3983 4326 3.435671 GGTCATACGCTATTGGGTATTGC 59.564 47.826 12.88 9.22 45.95 3.56
3984 4327 4.000988 GGGTCATACGCTATTGGGTATTG 58.999 47.826 12.88 9.55 45.95 1.90
3985 4328 3.908103 AGGGTCATACGCTATTGGGTATT 59.092 43.478 12.88 0.00 45.95 1.89
3986 4329 9.400766 TACCTAGGGTCATACGCTATTGGGTAT 62.401 44.444 14.81 10.34 41.79 2.73
3987 4330 2.966915 AGGGTCATACGCTATTGGGTA 58.033 47.619 6.54 6.54 39.78 3.69
3988 4331 1.802553 AGGGTCATACGCTATTGGGT 58.197 50.000 2.07 2.07 39.78 4.51
3989 4332 2.233922 CCTAGGGTCATACGCTATTGGG 59.766 54.545 0.00 0.34 41.79 4.12
3990 4333 2.897969 ACCTAGGGTCATACGCTATTGG 59.102 50.000 14.81 6.21 41.79 3.16
3991 4334 5.651530 CATACCTAGGGTCATACGCTATTG 58.348 45.833 14.81 2.92 41.79 1.90
3992 4335 4.159879 GCATACCTAGGGTCATACGCTATT 59.840 45.833 14.81 0.00 41.79 1.73
3993 4336 3.700038 GCATACCTAGGGTCATACGCTAT 59.300 47.826 14.81 0.00 41.79 2.97
3994 4337 3.087031 GCATACCTAGGGTCATACGCTA 58.913 50.000 14.81 4.12 41.82 4.26
3995 4338 1.893801 GCATACCTAGGGTCATACGCT 59.106 52.381 14.81 2.10 44.07 5.07
3996 4339 1.893801 AGCATACCTAGGGTCATACGC 59.106 52.381 14.81 0.00 37.09 4.42
3997 4340 4.307432 CAAAGCATACCTAGGGTCATACG 58.693 47.826 14.81 0.00 37.09 3.06
3998 4341 4.102681 ACCAAAGCATACCTAGGGTCATAC 59.897 45.833 14.81 0.00 37.09 2.39
3999 4342 4.303794 ACCAAAGCATACCTAGGGTCATA 58.696 43.478 14.81 0.00 37.09 2.15
4000 4343 3.123273 ACCAAAGCATACCTAGGGTCAT 58.877 45.455 14.81 0.00 37.09 3.06
4001 4344 2.557869 ACCAAAGCATACCTAGGGTCA 58.442 47.619 14.81 0.00 37.09 4.02
4002 4345 3.279434 CAACCAAAGCATACCTAGGGTC 58.721 50.000 14.81 0.00 37.09 4.46
4003 4346 2.620627 GCAACCAAAGCATACCTAGGGT 60.621 50.000 14.81 1.17 40.16 4.34
4004 4347 2.024414 GCAACCAAAGCATACCTAGGG 58.976 52.381 14.81 0.00 0.00 3.53
4005 4348 2.722094 TGCAACCAAAGCATACCTAGG 58.278 47.619 7.41 7.41 37.02 3.02
4014 4357 0.179179 GCTCTCGATGCAACCAAAGC 60.179 55.000 0.00 0.00 0.00 3.51
4015 4358 0.449388 GGCTCTCGATGCAACCAAAG 59.551 55.000 11.70 0.00 0.00 2.77
4016 4359 1.298157 CGGCTCTCGATGCAACCAAA 61.298 55.000 11.70 0.00 42.43 3.28
4017 4360 1.741401 CGGCTCTCGATGCAACCAA 60.741 57.895 11.70 0.00 42.43 3.67
4018 4361 2.125552 CGGCTCTCGATGCAACCA 60.126 61.111 11.70 0.00 42.43 3.67
4019 4362 2.184322 TCGGCTCTCGATGCAACC 59.816 61.111 11.70 0.00 43.74 3.77
4026 4369 1.806461 AAACACAGCTCGGCTCTCGA 61.806 55.000 0.00 0.00 46.77 4.04
4027 4370 0.109272 TAAACACAGCTCGGCTCTCG 60.109 55.000 0.00 0.00 36.40 4.04
4028 4371 1.202582 TCTAAACACAGCTCGGCTCTC 59.797 52.381 0.00 0.00 36.40 3.20
4029 4372 1.203523 CTCTAAACACAGCTCGGCTCT 59.796 52.381 0.00 0.00 36.40 4.09
4030 4373 1.202582 TCTCTAAACACAGCTCGGCTC 59.797 52.381 0.00 0.00 36.40 4.70
4031 4374 1.257743 TCTCTAAACACAGCTCGGCT 58.742 50.000 0.00 0.00 40.77 5.52
4032 4375 2.301577 ATCTCTAAACACAGCTCGGC 57.698 50.000 0.00 0.00 0.00 5.54
4033 4376 3.849911 TGAATCTCTAAACACAGCTCGG 58.150 45.455 0.00 0.00 0.00 4.63
4034 4377 4.738124 TCTGAATCTCTAAACACAGCTCG 58.262 43.478 0.00 0.00 0.00 5.03
4035 4378 4.566360 GCTCTGAATCTCTAAACACAGCTC 59.434 45.833 0.00 0.00 0.00 4.09
4036 4379 4.020751 TGCTCTGAATCTCTAAACACAGCT 60.021 41.667 0.00 0.00 0.00 4.24
4037 4380 4.248859 TGCTCTGAATCTCTAAACACAGC 58.751 43.478 0.00 0.00 0.00 4.40
4038 4381 6.339730 AGATGCTCTGAATCTCTAAACACAG 58.660 40.000 0.00 0.00 27.78 3.66
4039 4382 6.291648 AGATGCTCTGAATCTCTAAACACA 57.708 37.500 0.00 0.00 27.78 3.72
4040 4383 6.826893 GAGATGCTCTGAATCTCTAAACAC 57.173 41.667 10.67 0.00 44.43 3.32
4047 4390 4.558496 CGGGTTAGAGATGCTCTGAATCTC 60.558 50.000 10.15 10.15 46.99 2.75
4048 4391 3.320541 CGGGTTAGAGATGCTCTGAATCT 59.679 47.826 7.19 0.00 41.37 2.40
4049 4392 3.068873 ACGGGTTAGAGATGCTCTGAATC 59.931 47.826 7.19 0.00 41.37 2.52
4050 4393 3.034635 ACGGGTTAGAGATGCTCTGAAT 58.965 45.455 7.19 0.00 41.37 2.57
4051 4394 2.457598 ACGGGTTAGAGATGCTCTGAA 58.542 47.619 7.19 0.00 41.37 3.02
4052 4395 2.145397 ACGGGTTAGAGATGCTCTGA 57.855 50.000 7.19 0.00 41.37 3.27
4053 4396 2.482142 GGAACGGGTTAGAGATGCTCTG 60.482 54.545 7.19 0.00 41.37 3.35
4054 4397 1.757699 GGAACGGGTTAGAGATGCTCT 59.242 52.381 2.22 2.22 43.83 4.09
4055 4398 1.757699 AGGAACGGGTTAGAGATGCTC 59.242 52.381 0.00 0.00 0.00 4.26
4056 4399 1.867363 AGGAACGGGTTAGAGATGCT 58.133 50.000 0.00 0.00 0.00 3.79
4057 4400 2.093658 TGAAGGAACGGGTTAGAGATGC 60.094 50.000 0.00 0.00 0.00 3.91
4058 4401 3.887621 TGAAGGAACGGGTTAGAGATG 57.112 47.619 0.00 0.00 0.00 2.90
4059 4402 4.903045 TTTGAAGGAACGGGTTAGAGAT 57.097 40.909 0.00 0.00 0.00 2.75
4060 4403 4.102054 AGTTTTGAAGGAACGGGTTAGAGA 59.898 41.667 0.00 0.00 32.38 3.10
4061 4404 4.386711 AGTTTTGAAGGAACGGGTTAGAG 58.613 43.478 0.00 0.00 32.38 2.43
4062 4405 4.426736 AGTTTTGAAGGAACGGGTTAGA 57.573 40.909 0.00 0.00 32.38 2.10
4063 4406 5.509716 AAAGTTTTGAAGGAACGGGTTAG 57.490 39.130 0.00 0.00 32.38 2.34
4064 4407 5.918426 AAAAGTTTTGAAGGAACGGGTTA 57.082 34.783 0.00 0.00 32.38 2.85
4065 4408 4.811969 AAAAGTTTTGAAGGAACGGGTT 57.188 36.364 0.00 0.00 32.38 4.11
4066 4409 4.811969 AAAAAGTTTTGAAGGAACGGGT 57.188 36.364 0.61 0.00 32.38 5.28
4067 4410 7.042321 GGAATTAAAAAGTTTTGAAGGAACGGG 60.042 37.037 0.61 0.00 32.38 5.28
4068 4411 7.709182 AGGAATTAAAAAGTTTTGAAGGAACGG 59.291 33.333 0.61 0.00 32.38 4.44
4069 4412 8.642908 AGGAATTAAAAAGTTTTGAAGGAACG 57.357 30.769 0.61 0.00 32.38 3.95
4123 4466 8.351461 CGGTTAATTCCCTAAACAAACTTTGTA 58.649 33.333 7.59 0.00 44.59 2.41
4125 4468 6.144886 GCGGTTAATTCCCTAAACAAACTTTG 59.855 38.462 0.00 0.00 0.00 2.77
4126 4469 6.183360 TGCGGTTAATTCCCTAAACAAACTTT 60.183 34.615 0.00 0.00 0.00 2.66
4127 4470 5.302313 TGCGGTTAATTCCCTAAACAAACTT 59.698 36.000 0.00 0.00 0.00 2.66
4128 4471 4.828387 TGCGGTTAATTCCCTAAACAAACT 59.172 37.500 0.00 0.00 0.00 2.66
4129 4472 5.123805 TGCGGTTAATTCCCTAAACAAAC 57.876 39.130 0.00 0.00 0.00 2.93
4130 4473 4.321378 GCTGCGGTTAATTCCCTAAACAAA 60.321 41.667 0.00 0.00 0.00 2.83
4131 4474 3.191791 GCTGCGGTTAATTCCCTAAACAA 59.808 43.478 0.00 0.00 0.00 2.83
4132 4475 2.750712 GCTGCGGTTAATTCCCTAAACA 59.249 45.455 0.00 0.00 0.00 2.83
4133 4476 3.014623 AGCTGCGGTTAATTCCCTAAAC 58.985 45.455 0.00 0.00 0.00 2.01
4134 4477 3.359695 AGCTGCGGTTAATTCCCTAAA 57.640 42.857 0.00 0.00 0.00 1.85
4135 4478 4.490899 TTAGCTGCGGTTAATTCCCTAA 57.509 40.909 0.00 0.00 0.00 2.69
4136 4479 4.699925 ATTAGCTGCGGTTAATTCCCTA 57.300 40.909 8.69 0.00 0.00 3.53
4137 4480 3.577805 ATTAGCTGCGGTTAATTCCCT 57.422 42.857 8.69 0.00 0.00 4.20
4138 4481 3.883489 AGAATTAGCTGCGGTTAATTCCC 59.117 43.478 33.64 20.76 46.88 3.97
4139 4482 5.500645 AAGAATTAGCTGCGGTTAATTCC 57.499 39.130 33.64 22.80 46.88 3.01
4140 4483 5.505819 GGGAAGAATTAGCTGCGGTTAATTC 60.506 44.000 31.88 31.88 46.47 2.17
4141 4484 4.338400 GGGAAGAATTAGCTGCGGTTAATT 59.662 41.667 22.78 22.78 40.04 1.40
4142 4485 3.883489 GGGAAGAATTAGCTGCGGTTAAT 59.117 43.478 8.69 8.69 31.71 1.40
4143 4486 3.054655 AGGGAAGAATTAGCTGCGGTTAA 60.055 43.478 4.16 4.16 0.00 2.01
4144 4487 2.504175 AGGGAAGAATTAGCTGCGGTTA 59.496 45.455 0.00 0.00 0.00 2.85
4145 4488 1.282157 AGGGAAGAATTAGCTGCGGTT 59.718 47.619 0.00 0.00 0.00 4.44
4146 4489 0.912486 AGGGAAGAATTAGCTGCGGT 59.088 50.000 0.00 0.00 0.00 5.68
4147 4490 1.134401 TGAGGGAAGAATTAGCTGCGG 60.134 52.381 0.00 0.00 0.00 5.69
4148 4491 2.315925 TGAGGGAAGAATTAGCTGCG 57.684 50.000 0.00 0.00 0.00 5.18
4149 4492 5.391312 TTTTTGAGGGAAGAATTAGCTGC 57.609 39.130 0.00 0.00 0.00 5.25
4168 4511 2.495762 GGGTGGGGAAGGGGTAATTTTT 60.496 50.000 0.00 0.00 0.00 1.94
4169 4512 1.079825 GGGTGGGGAAGGGGTAATTTT 59.920 52.381 0.00 0.00 0.00 1.82
4170 4513 0.714180 GGGTGGGGAAGGGGTAATTT 59.286 55.000 0.00 0.00 0.00 1.82
4171 4514 1.226104 GGGGTGGGGAAGGGGTAATT 61.226 60.000 0.00 0.00 0.00 1.40
4172 4515 1.624623 GGGGTGGGGAAGGGGTAAT 60.625 63.158 0.00 0.00 0.00 1.89
4173 4516 2.204338 GGGGTGGGGAAGGGGTAA 60.204 66.667 0.00 0.00 0.00 2.85
4174 4517 4.374518 GGGGGTGGGGAAGGGGTA 62.375 72.222 0.00 0.00 0.00 3.69
4179 4522 4.693915 TGGGAGGGGGTGGGGAAG 62.694 72.222 0.00 0.00 0.00 3.46
4180 4523 3.777522 TTTGGGAGGGGGTGGGGAA 62.778 63.158 0.00 0.00 0.00 3.97
4181 4524 3.548934 ATTTGGGAGGGGGTGGGGA 62.549 63.158 0.00 0.00 0.00 4.81
4182 4525 2.118547 AAATTTGGGAGGGGGTGGGG 62.119 60.000 0.00 0.00 0.00 4.96
4183 4526 0.713579 TAAATTTGGGAGGGGGTGGG 59.286 55.000 0.00 0.00 0.00 4.61
4184 4527 2.632763 TTAAATTTGGGAGGGGGTGG 57.367 50.000 0.00 0.00 0.00 4.61
4185 4528 6.823286 ATAAATTAAATTTGGGAGGGGGTG 57.177 37.500 0.00 0.00 33.82 4.61
4186 4529 7.667848 AGTATAAATTAAATTTGGGAGGGGGT 58.332 34.615 0.00 0.00 33.82 4.95
4187 4530 9.837681 ATAGTATAAATTAAATTTGGGAGGGGG 57.162 33.333 0.00 0.00 33.82 5.40
4209 4552 8.756927 GGGGAAAAACTAGTAAGTAGTGATAGT 58.243 37.037 0.00 0.00 41.50 2.12
4210 4553 8.755977 TGGGGAAAAACTAGTAAGTAGTGATAG 58.244 37.037 0.00 0.00 41.50 2.08
4211 4554 8.669055 TGGGGAAAAACTAGTAAGTAGTGATA 57.331 34.615 0.00 0.00 41.50 2.15
4212 4555 7.456902 TCTGGGGAAAAACTAGTAAGTAGTGAT 59.543 37.037 0.00 0.00 41.50 3.06
4213 4556 6.783977 TCTGGGGAAAAACTAGTAAGTAGTGA 59.216 38.462 0.00 0.00 41.50 3.41
4214 4557 7.001099 TCTGGGGAAAAACTAGTAAGTAGTG 57.999 40.000 0.00 0.00 41.50 2.74
4215 4558 7.092979 GGATCTGGGGAAAAACTAGTAAGTAGT 60.093 40.741 0.00 0.00 44.51 2.73
4216 4559 7.093024 TGGATCTGGGGAAAAACTAGTAAGTAG 60.093 40.741 0.00 0.00 33.75 2.57
4217 4560 6.731919 TGGATCTGGGGAAAAACTAGTAAGTA 59.268 38.462 0.00 0.00 33.75 2.24
4218 4561 5.550403 TGGATCTGGGGAAAAACTAGTAAGT 59.450 40.000 0.00 0.00 37.65 2.24
4219 4562 5.880887 GTGGATCTGGGGAAAAACTAGTAAG 59.119 44.000 0.00 0.00 0.00 2.34
4220 4563 5.280830 GGTGGATCTGGGGAAAAACTAGTAA 60.281 44.000 0.00 0.00 0.00 2.24
4221 4564 4.226620 GGTGGATCTGGGGAAAAACTAGTA 59.773 45.833 0.00 0.00 0.00 1.82
4222 4565 3.010250 GGTGGATCTGGGGAAAAACTAGT 59.990 47.826 0.00 0.00 0.00 2.57
4223 4566 3.621558 GGTGGATCTGGGGAAAAACTAG 58.378 50.000 0.00 0.00 0.00 2.57
4224 4567 2.310647 GGGTGGATCTGGGGAAAAACTA 59.689 50.000 0.00 0.00 0.00 2.24
4225 4568 1.077169 GGGTGGATCTGGGGAAAAACT 59.923 52.381 0.00 0.00 0.00 2.66
4226 4569 1.557099 GGGTGGATCTGGGGAAAAAC 58.443 55.000 0.00 0.00 0.00 2.43
4227 4570 0.411848 GGGGTGGATCTGGGGAAAAA 59.588 55.000 0.00 0.00 0.00 1.94
4228 4571 1.514864 GGGGGTGGATCTGGGGAAAA 61.515 60.000 0.00 0.00 0.00 2.29
4229 4572 1.933812 GGGGGTGGATCTGGGGAAA 60.934 63.158 0.00 0.00 0.00 3.13
4230 4573 2.286885 GGGGGTGGATCTGGGGAA 60.287 66.667 0.00 0.00 0.00 3.97


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.