Multiple sequence alignment - TraesCS5A01G076000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G076000 chr5A 100.000 2749 0 0 1 2749 91626405 91623657 0.000000e+00 5077
1 TraesCS5A01G076000 chr5A 84.981 779 85 10 983 1760 91550026 91549279 0.000000e+00 761
2 TraesCS5A01G076000 chr5B 89.858 1765 145 14 988 2749 102741858 102740125 0.000000e+00 2237
3 TraesCS5A01G076000 chr5B 90.893 1142 88 8 966 2105 102887253 102886126 0.000000e+00 1519
4 TraesCS5A01G076000 chr5B 92.883 829 58 1 961 1788 102906955 102906127 0.000000e+00 1203
5 TraesCS5A01G076000 chr5B 94.928 690 32 1 2056 2745 102886126 102885440 0.000000e+00 1077
6 TraesCS5A01G076000 chr5B 83.661 508 44 11 2079 2586 102905434 102904966 2.510000e-120 442
7 TraesCS5A01G076000 chr5B 85.714 203 25 3 1837 2039 102906115 102905917 7.710000e-51 211
8 TraesCS5A01G076000 chr5B 93.684 95 6 0 2581 2675 102896163 102896069 2.850000e-30 143
9 TraesCS5A01G076000 chr5D 87.493 1775 168 27 961 2693 96336934 96335172 0.000000e+00 1999
10 TraesCS5A01G076000 chr5D 87.812 960 67 22 983 1938 96249483 96248570 0.000000e+00 1079
11 TraesCS5A01G076000 chr5D 73.609 701 111 39 2018 2653 96248517 96247826 4.640000e-48 202
12 TraesCS5A01G076000 chr3B 95.254 295 12 2 570 864 727161426 727161134 1.490000e-127 466
13 TraesCS5A01G076000 chr3B 95.238 294 13 1 567 860 623667290 623667582 5.360000e-127 464
14 TraesCS5A01G076000 chr3B 94.295 298 15 2 570 866 798950216 798949920 3.230000e-124 455
15 TraesCS5A01G076000 chr1B 95.533 291 12 1 570 860 294526515 294526226 5.360000e-127 464
16 TraesCS5A01G076000 chr7A 94.898 294 14 1 570 863 727101568 727101276 2.490000e-125 459
17 TraesCS5A01G076000 chr3A 94.314 299 15 2 567 865 630763909 630764205 8.970000e-125 457
18 TraesCS5A01G076000 chr2B 94.314 299 16 1 567 865 389456937 389457234 8.970000e-125 457
19 TraesCS5A01G076000 chr2A 94.595 296 14 2 570 865 70890107 70889814 8.970000e-125 457
20 TraesCS5A01G076000 chr6A 94.295 298 15 2 570 866 181910139 181909843 3.230000e-124 455


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G076000 chr5A 91623657 91626405 2748 True 5077.000000 5077 100.000000 1 2749 1 chr5A.!!$R2 2748
1 TraesCS5A01G076000 chr5A 91549279 91550026 747 True 761.000000 761 84.981000 983 1760 1 chr5A.!!$R1 777
2 TraesCS5A01G076000 chr5B 102740125 102741858 1733 True 2237.000000 2237 89.858000 988 2749 1 chr5B.!!$R1 1761
3 TraesCS5A01G076000 chr5B 102885440 102887253 1813 True 1298.000000 1519 92.910500 966 2745 2 chr5B.!!$R3 1779
4 TraesCS5A01G076000 chr5B 102904966 102906955 1989 True 618.666667 1203 87.419333 961 2586 3 chr5B.!!$R4 1625
5 TraesCS5A01G076000 chr5D 96335172 96336934 1762 True 1999.000000 1999 87.493000 961 2693 1 chr5D.!!$R1 1732
6 TraesCS5A01G076000 chr5D 96247826 96249483 1657 True 640.500000 1079 80.710500 983 2653 2 chr5D.!!$R2 1670

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
926 927 0.0293 GCGTACGGTATAACTCGCCA 59.971 55.0 18.39 0.0 38.16 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2098 2577 0.108585 ACAGCAACCTCGACCAACAT 59.891 50.0 0.0 0.0 0.0 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 8.768957 TGTTCTTGAATTCAAAAACATGTTCA 57.231 26.923 28.05 11.11 40.60 3.18
57 58 9.381033 TGTTCTTGAATTCAAAAACATGTTCAT 57.619 25.926 28.05 0.93 40.60 2.57
111 112 9.500785 AAATGTTCCCGATTTCAAAATAAATGT 57.499 25.926 0.00 0.00 0.00 2.71
112 113 9.500785 AATGTTCCCGATTTCAAAATAAATGTT 57.499 25.926 0.00 0.00 0.00 2.71
113 114 8.527567 TGTTCCCGATTTCAAAATAAATGTTC 57.472 30.769 0.00 0.00 0.00 3.18
114 115 8.144478 TGTTCCCGATTTCAAAATAAATGTTCA 58.856 29.630 0.00 0.00 0.00 3.18
115 116 9.150348 GTTCCCGATTTCAAAATAAATGTTCAT 57.850 29.630 0.00 0.00 0.00 2.57
116 117 8.700722 TCCCGATTTCAAAATAAATGTTCATG 57.299 30.769 0.00 0.00 0.00 3.07
117 118 8.526978 TCCCGATTTCAAAATAAATGTTCATGA 58.473 29.630 0.00 0.00 0.00 3.07
118 119 8.810427 CCCGATTTCAAAATAAATGTTCATGAG 58.190 33.333 0.00 0.00 0.00 2.90
119 120 9.357652 CCGATTTCAAAATAAATGTTCATGAGT 57.642 29.630 0.00 0.00 0.00 3.41
292 293 6.900568 AAATGTTCACGCATTTTCAAAAGA 57.099 29.167 0.00 0.00 43.97 2.52
293 294 6.900568 AATGTTCACGCATTTTCAAAAGAA 57.099 29.167 0.00 0.00 35.76 2.52
294 295 6.900568 ATGTTCACGCATTTTCAAAAGAAA 57.099 29.167 0.00 0.00 0.00 2.52
295 296 6.712241 TGTTCACGCATTTTCAAAAGAAAA 57.288 29.167 5.93 5.93 38.26 2.29
296 297 7.121974 TGTTCACGCATTTTCAAAAGAAAAA 57.878 28.000 7.38 0.00 37.55 1.94
297 298 7.012358 TGTTCACGCATTTTCAAAAGAAAAAC 58.988 30.769 7.38 3.21 37.55 2.43
298 299 6.100792 TCACGCATTTTCAAAAGAAAAACC 57.899 33.333 7.38 2.05 37.55 3.27
299 300 5.872070 TCACGCATTTTCAAAAGAAAAACCT 59.128 32.000 7.38 0.00 37.55 3.50
300 301 6.035542 TCACGCATTTTCAAAAGAAAAACCTC 59.964 34.615 7.38 0.00 37.55 3.85
301 302 5.872070 ACGCATTTTCAAAAGAAAAACCTCA 59.128 32.000 7.38 0.00 37.55 3.86
302 303 6.370166 ACGCATTTTCAAAAGAAAAACCTCAA 59.630 30.769 7.38 0.00 37.55 3.02
303 304 7.065683 ACGCATTTTCAAAAGAAAAACCTCAAT 59.934 29.630 7.38 0.00 37.55 2.57
304 305 7.909641 CGCATTTTCAAAAGAAAAACCTCAATT 59.090 29.630 7.38 0.00 37.55 2.32
305 306 9.571810 GCATTTTCAAAAGAAAAACCTCAATTT 57.428 25.926 7.38 0.00 37.55 1.82
316 317 9.508642 AGAAAAACCTCAATTTTAAAAACCACA 57.491 25.926 4.44 0.00 31.50 4.17
436 437 9.936759 AAAAGTAAACACAAAAGGATCAAAAGA 57.063 25.926 0.00 0.00 0.00 2.52
437 438 9.586435 AAAGTAAACACAAAAGGATCAAAAGAG 57.414 29.630 0.00 0.00 0.00 2.85
438 439 8.519799 AGTAAACACAAAAGGATCAAAAGAGA 57.480 30.769 0.00 0.00 0.00 3.10
439 440 8.966868 AGTAAACACAAAAGGATCAAAAGAGAA 58.033 29.630 0.00 0.00 0.00 2.87
440 441 9.581099 GTAAACACAAAAGGATCAAAAGAGAAA 57.419 29.630 0.00 0.00 0.00 2.52
442 443 9.500785 AAACACAAAAGGATCAAAAGAGAAAAA 57.499 25.926 0.00 0.00 0.00 1.94
443 444 8.707938 ACACAAAAGGATCAAAAGAGAAAAAG 57.292 30.769 0.00 0.00 0.00 2.27
444 445 8.531146 ACACAAAAGGATCAAAAGAGAAAAAGA 58.469 29.630 0.00 0.00 0.00 2.52
445 446 9.369904 CACAAAAGGATCAAAAGAGAAAAAGAA 57.630 29.630 0.00 0.00 0.00 2.52
446 447 9.942850 ACAAAAGGATCAAAAGAGAAAAAGAAA 57.057 25.926 0.00 0.00 0.00 2.52
451 452 9.551734 AGGATCAAAAGAGAAAAAGAAAAATGG 57.448 29.630 0.00 0.00 0.00 3.16
452 453 9.546428 GGATCAAAAGAGAAAAAGAAAAATGGA 57.454 29.630 0.00 0.00 0.00 3.41
465 466 9.958180 AAAAGAAAAATGGAGAAAAGAAAAGGA 57.042 25.926 0.00 0.00 0.00 3.36
466 467 9.958180 AAAGAAAAATGGAGAAAAGAAAAGGAA 57.042 25.926 0.00 0.00 0.00 3.36
467 468 9.958180 AAGAAAAATGGAGAAAAGAAAAGGAAA 57.042 25.926 0.00 0.00 0.00 3.13
468 469 9.605275 AGAAAAATGGAGAAAAGAAAAGGAAAG 57.395 29.630 0.00 0.00 0.00 2.62
469 470 9.599866 GAAAAATGGAGAAAAGAAAAGGAAAGA 57.400 29.630 0.00 0.00 0.00 2.52
470 471 9.958180 AAAAATGGAGAAAAGAAAAGGAAAGAA 57.042 25.926 0.00 0.00 0.00 2.52
471 472 9.958180 AAAATGGAGAAAAGAAAAGGAAAGAAA 57.042 25.926 0.00 0.00 0.00 2.52
472 473 9.958180 AAATGGAGAAAAGAAAAGGAAAGAAAA 57.042 25.926 0.00 0.00 0.00 2.29
473 474 9.958180 AATGGAGAAAAGAAAAGGAAAGAAAAA 57.042 25.926 0.00 0.00 0.00 1.94
508 509 2.352503 AAAAACAGCAGCGCTTATGG 57.647 45.000 19.72 5.89 36.40 2.74
509 510 0.109132 AAAACAGCAGCGCTTATGGC 60.109 50.000 19.72 15.11 36.40 4.40
520 521 2.688364 GCTTATGGCGCATAGGTTTC 57.312 50.000 10.83 0.00 0.00 2.78
521 522 2.222027 GCTTATGGCGCATAGGTTTCT 58.778 47.619 10.83 0.00 0.00 2.52
522 523 2.031682 GCTTATGGCGCATAGGTTTCTG 60.032 50.000 10.83 0.00 0.00 3.02
523 524 1.593196 TATGGCGCATAGGTTTCTGC 58.407 50.000 10.83 0.00 35.02 4.26
524 525 1.103398 ATGGCGCATAGGTTTCTGCC 61.103 55.000 10.83 0.00 42.76 4.85
525 526 1.748879 GGCGCATAGGTTTCTGCCA 60.749 57.895 10.83 0.00 42.03 4.92
526 527 1.312371 GGCGCATAGGTTTCTGCCAA 61.312 55.000 10.83 0.00 42.03 4.52
527 528 0.099436 GCGCATAGGTTTCTGCCAAG 59.901 55.000 0.30 0.00 34.89 3.61
528 529 0.099436 CGCATAGGTTTCTGCCAAGC 59.901 55.000 0.00 0.00 34.89 4.01
529 530 0.099436 GCATAGGTTTCTGCCAAGCG 59.901 55.000 0.00 0.00 32.15 4.68
530 531 0.099436 CATAGGTTTCTGCCAAGCGC 59.901 55.000 0.00 0.00 38.31 5.92
531 532 1.032114 ATAGGTTTCTGCCAAGCGCC 61.032 55.000 2.29 0.00 36.24 6.53
532 533 4.056125 GGTTTCTGCCAAGCGCCC 62.056 66.667 2.29 0.00 36.24 6.13
533 534 2.985847 GTTTCTGCCAAGCGCCCT 60.986 61.111 2.29 0.00 36.24 5.19
534 535 2.672996 TTTCTGCCAAGCGCCCTC 60.673 61.111 2.29 0.00 36.24 4.30
537 538 4.845580 CTGCCAAGCGCCCTCGAT 62.846 66.667 2.29 0.00 38.10 3.59
538 539 3.445518 CTGCCAAGCGCCCTCGATA 62.446 63.158 2.29 0.00 38.10 2.92
539 540 2.031163 GCCAAGCGCCCTCGATAT 59.969 61.111 2.29 0.00 38.10 1.63
540 541 2.320587 GCCAAGCGCCCTCGATATG 61.321 63.158 2.29 0.00 38.10 1.78
541 542 1.069765 CCAAGCGCCCTCGATATGT 59.930 57.895 2.29 0.00 38.10 2.29
542 543 0.532862 CCAAGCGCCCTCGATATGTT 60.533 55.000 2.29 0.00 38.10 2.71
543 544 1.270094 CCAAGCGCCCTCGATATGTTA 60.270 52.381 2.29 0.00 38.10 2.41
544 545 1.792949 CAAGCGCCCTCGATATGTTAC 59.207 52.381 2.29 0.00 38.10 2.50
545 546 1.329256 AGCGCCCTCGATATGTTACT 58.671 50.000 2.29 0.00 38.10 2.24
546 547 1.269998 AGCGCCCTCGATATGTTACTC 59.730 52.381 2.29 0.00 38.10 2.59
547 548 1.965083 CGCCCTCGATATGTTACTCG 58.035 55.000 0.00 0.00 38.10 4.18
548 549 1.534163 CGCCCTCGATATGTTACTCGA 59.466 52.381 0.00 0.00 41.27 4.04
549 550 2.031420 CGCCCTCGATATGTTACTCGAA 60.031 50.000 0.00 0.00 42.73 3.71
550 551 3.549423 CGCCCTCGATATGTTACTCGAAA 60.549 47.826 0.00 0.00 42.73 3.46
551 552 4.365723 GCCCTCGATATGTTACTCGAAAA 58.634 43.478 0.00 0.00 42.73 2.29
552 553 4.807304 GCCCTCGATATGTTACTCGAAAAA 59.193 41.667 0.00 0.00 42.73 1.94
575 576 3.377656 GAGGCCGTCTCTGGTTGA 58.622 61.111 0.00 0.00 39.38 3.18
576 577 1.216710 GAGGCCGTCTCTGGTTGAG 59.783 63.158 0.00 0.00 43.96 3.02
587 588 5.604758 TCTCTGGTTGAGATGATTAGGTG 57.395 43.478 0.00 0.00 46.03 4.00
588 589 4.406972 TCTCTGGTTGAGATGATTAGGTGG 59.593 45.833 0.00 0.00 46.03 4.61
589 590 4.361783 TCTGGTTGAGATGATTAGGTGGA 58.638 43.478 0.00 0.00 0.00 4.02
590 591 4.162320 TCTGGTTGAGATGATTAGGTGGAC 59.838 45.833 0.00 0.00 0.00 4.02
591 592 3.843619 TGGTTGAGATGATTAGGTGGACA 59.156 43.478 0.00 0.00 0.00 4.02
592 593 4.080919 TGGTTGAGATGATTAGGTGGACAG 60.081 45.833 0.00 0.00 0.00 3.51
593 594 4.080863 GGTTGAGATGATTAGGTGGACAGT 60.081 45.833 0.00 0.00 0.00 3.55
594 595 4.743057 TGAGATGATTAGGTGGACAGTG 57.257 45.455 0.00 0.00 0.00 3.66
595 596 3.452264 TGAGATGATTAGGTGGACAGTGG 59.548 47.826 0.00 0.00 0.00 4.00
596 597 3.452627 GAGATGATTAGGTGGACAGTGGT 59.547 47.826 0.00 0.00 0.00 4.16
597 598 4.620723 AGATGATTAGGTGGACAGTGGTA 58.379 43.478 0.00 0.00 0.00 3.25
598 599 5.219739 AGATGATTAGGTGGACAGTGGTAT 58.780 41.667 0.00 0.00 0.00 2.73
599 600 5.305644 AGATGATTAGGTGGACAGTGGTATC 59.694 44.000 0.00 0.00 0.00 2.24
600 601 4.620723 TGATTAGGTGGACAGTGGTATCT 58.379 43.478 0.00 0.00 0.00 1.98
601 602 4.649674 TGATTAGGTGGACAGTGGTATCTC 59.350 45.833 0.00 0.00 0.00 2.75
602 603 1.475403 AGGTGGACAGTGGTATCTCG 58.525 55.000 0.00 0.00 0.00 4.04
603 604 0.179108 GGTGGACAGTGGTATCTCGC 60.179 60.000 0.00 0.00 0.00 5.03
604 605 0.530744 GTGGACAGTGGTATCTCGCA 59.469 55.000 0.00 0.00 0.00 5.10
605 606 1.067142 GTGGACAGTGGTATCTCGCAA 60.067 52.381 0.00 0.00 0.00 4.85
606 607 1.067142 TGGACAGTGGTATCTCGCAAC 60.067 52.381 0.00 0.00 0.00 4.17
607 608 1.641577 GACAGTGGTATCTCGCAACC 58.358 55.000 0.00 0.00 36.24 3.77
608 609 0.249398 ACAGTGGTATCTCGCAACCC 59.751 55.000 0.00 0.00 34.69 4.11
609 610 0.249120 CAGTGGTATCTCGCAACCCA 59.751 55.000 0.00 0.00 34.69 4.51
610 611 0.249398 AGTGGTATCTCGCAACCCAC 59.751 55.000 0.00 0.00 44.69 4.61
611 612 0.743345 GTGGTATCTCGCAACCCACC 60.743 60.000 0.00 0.00 39.71 4.61
612 613 1.195442 TGGTATCTCGCAACCCACCA 61.195 55.000 0.00 0.00 34.69 4.17
613 614 0.462047 GGTATCTCGCAACCCACCAG 60.462 60.000 0.00 0.00 0.00 4.00
614 615 0.462047 GTATCTCGCAACCCACCAGG 60.462 60.000 0.00 0.00 43.78 4.45
630 631 3.363787 AGGGTTCAAATCCTGGTGC 57.636 52.632 0.00 0.00 38.36 5.01
631 632 0.779997 AGGGTTCAAATCCTGGTGCT 59.220 50.000 0.00 0.00 38.36 4.40
632 633 1.177401 GGGTTCAAATCCTGGTGCTC 58.823 55.000 0.00 0.00 0.00 4.26
633 634 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
634 635 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
635 636 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
636 637 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
637 638 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
638 639 2.016318 CAAATCCTGGTGCTCGCATTA 58.984 47.619 0.00 0.00 0.00 1.90
639 640 2.620115 CAAATCCTGGTGCTCGCATTAT 59.380 45.455 0.00 0.00 0.00 1.28
640 641 2.645838 ATCCTGGTGCTCGCATTATT 57.354 45.000 0.00 0.00 0.00 1.40
641 642 2.418368 TCCTGGTGCTCGCATTATTT 57.582 45.000 0.00 0.00 0.00 1.40
642 643 2.288666 TCCTGGTGCTCGCATTATTTC 58.711 47.619 0.00 0.00 0.00 2.17
643 644 2.092968 TCCTGGTGCTCGCATTATTTCT 60.093 45.455 0.00 0.00 0.00 2.52
644 645 2.032550 CCTGGTGCTCGCATTATTTCTG 59.967 50.000 0.00 0.00 0.00 3.02
645 646 2.016318 TGGTGCTCGCATTATTTCTGG 58.984 47.619 0.00 0.00 0.00 3.86
646 647 2.288666 GGTGCTCGCATTATTTCTGGA 58.711 47.619 0.00 0.00 0.00 3.86
647 648 2.880890 GGTGCTCGCATTATTTCTGGAT 59.119 45.455 0.00 0.00 0.00 3.41
648 649 3.316308 GGTGCTCGCATTATTTCTGGATT 59.684 43.478 0.00 0.00 0.00 3.01
649 650 4.202050 GGTGCTCGCATTATTTCTGGATTT 60.202 41.667 0.00 0.00 0.00 2.17
650 651 5.008613 GGTGCTCGCATTATTTCTGGATTTA 59.991 40.000 0.00 0.00 0.00 1.40
651 652 6.294176 GGTGCTCGCATTATTTCTGGATTTAT 60.294 38.462 0.00 0.00 0.00 1.40
652 653 7.141363 GTGCTCGCATTATTTCTGGATTTATT 58.859 34.615 0.00 0.00 0.00 1.40
653 654 7.649306 GTGCTCGCATTATTTCTGGATTTATTT 59.351 33.333 0.00 0.00 0.00 1.40
654 655 7.862372 TGCTCGCATTATTTCTGGATTTATTTC 59.138 33.333 0.00 0.00 0.00 2.17
655 656 7.862372 GCTCGCATTATTTCTGGATTTATTTCA 59.138 33.333 0.00 0.00 0.00 2.69
656 657 9.390795 CTCGCATTATTTCTGGATTTATTTCAG 57.609 33.333 0.00 0.00 0.00 3.02
657 658 9.119418 TCGCATTATTTCTGGATTTATTTCAGA 57.881 29.630 0.00 0.00 35.95 3.27
658 659 9.734620 CGCATTATTTCTGGATTTATTTCAGAA 57.265 29.630 0.00 0.00 43.25 3.02
664 665 9.807649 ATTTCTGGATTTATTTCAGAATTTCCG 57.192 29.630 5.93 0.00 44.00 4.30
665 666 7.333528 TCTGGATTTATTTCAGAATTTCCGG 57.666 36.000 0.00 0.00 34.97 5.14
666 667 5.901552 TGGATTTATTTCAGAATTTCCGGC 58.098 37.500 0.00 0.00 0.00 6.13
667 668 4.976116 GGATTTATTTCAGAATTTCCGGCG 59.024 41.667 0.00 0.00 0.00 6.46
668 669 5.220970 GGATTTATTTCAGAATTTCCGGCGA 60.221 40.000 9.30 0.00 0.00 5.54
669 670 5.828299 TTTATTTCAGAATTTCCGGCGAT 57.172 34.783 9.30 0.00 0.00 4.58
670 671 3.698029 ATTTCAGAATTTCCGGCGATG 57.302 42.857 9.30 0.00 0.00 3.84
671 672 0.732571 TTCAGAATTTCCGGCGATGC 59.267 50.000 9.30 0.00 0.00 3.91
672 673 1.010797 CAGAATTTCCGGCGATGCG 60.011 57.895 9.30 0.00 0.00 4.73
673 674 1.449601 AGAATTTCCGGCGATGCGT 60.450 52.632 9.30 0.00 0.00 5.24
674 675 1.024579 AGAATTTCCGGCGATGCGTT 61.025 50.000 9.30 0.00 0.00 4.84
675 676 0.179174 GAATTTCCGGCGATGCGTTT 60.179 50.000 9.30 0.00 0.00 3.60
676 677 0.242555 AATTTCCGGCGATGCGTTTT 59.757 45.000 9.30 0.00 0.00 2.43
677 678 0.179174 ATTTCCGGCGATGCGTTTTC 60.179 50.000 9.30 0.00 0.00 2.29
678 679 1.507974 TTTCCGGCGATGCGTTTTCA 61.508 50.000 9.30 0.00 0.00 2.69
679 680 1.906994 TTCCGGCGATGCGTTTTCAG 61.907 55.000 9.30 0.00 0.00 3.02
680 681 2.677003 CCGGCGATGCGTTTTCAGT 61.677 57.895 9.30 0.00 0.00 3.41
681 682 1.509787 CGGCGATGCGTTTTCAGTG 60.510 57.895 0.00 0.00 0.00 3.66
682 683 1.154225 GGCGATGCGTTTTCAGTGG 60.154 57.895 0.00 0.00 0.00 4.00
683 684 1.154225 GCGATGCGTTTTCAGTGGG 60.154 57.895 0.00 0.00 0.00 4.61
684 685 1.573829 GCGATGCGTTTTCAGTGGGA 61.574 55.000 0.00 0.00 0.00 4.37
685 686 0.443869 CGATGCGTTTTCAGTGGGAG 59.556 55.000 0.00 0.00 0.00 4.30
686 687 0.804989 GATGCGTTTTCAGTGGGAGG 59.195 55.000 0.00 0.00 0.00 4.30
687 688 0.400213 ATGCGTTTTCAGTGGGAGGA 59.600 50.000 0.00 0.00 0.00 3.71
688 689 0.250295 TGCGTTTTCAGTGGGAGGAG 60.250 55.000 0.00 0.00 0.00 3.69
689 690 0.034896 GCGTTTTCAGTGGGAGGAGA 59.965 55.000 0.00 0.00 0.00 3.71
690 691 1.797025 CGTTTTCAGTGGGAGGAGAC 58.203 55.000 0.00 0.00 0.00 3.36
691 692 1.797025 GTTTTCAGTGGGAGGAGACG 58.203 55.000 0.00 0.00 0.00 4.18
692 693 1.070289 GTTTTCAGTGGGAGGAGACGT 59.930 52.381 0.00 0.00 0.00 4.34
693 694 1.420430 TTTCAGTGGGAGGAGACGTT 58.580 50.000 0.00 0.00 0.00 3.99
694 695 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
695 696 0.112606 TCAGTGGGAGGAGACGTTCT 59.887 55.000 0.00 0.00 0.00 3.01
696 697 0.528470 CAGTGGGAGGAGACGTTCTC 59.472 60.000 0.00 0.00 42.66 2.87
697 698 0.961358 AGTGGGAGGAGACGTTCTCG 60.961 60.000 0.00 0.00 44.28 4.04
717 718 4.883300 GACGACGAGGCGCCTACG 62.883 72.222 32.91 32.91 44.07 3.51
720 721 4.849329 GACGAGGCGCCTACGGTG 62.849 72.222 34.97 23.88 40.57 4.94
722 723 4.849329 CGAGGCGCCTACGGTGAC 62.849 72.222 32.97 14.51 42.50 3.67
725 726 2.508663 GGCGCCTACGGTGACTTC 60.509 66.667 22.15 0.00 38.38 3.01
726 727 2.879462 GCGCCTACGGTGACTTCG 60.879 66.667 0.00 0.00 40.57 3.79
727 728 2.564975 CGCCTACGGTGACTTCGT 59.435 61.111 0.00 0.00 43.64 3.85
728 729 1.796151 CGCCTACGGTGACTTCGTA 59.204 57.895 0.00 0.00 41.38 3.43
729 730 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
730 731 1.401409 CGCCTACGGTGACTTCGTAAA 60.401 52.381 0.00 0.00 41.62 2.01
731 732 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
732 733 2.856557 GCCTACGGTGACTTCGTAAATC 59.143 50.000 0.00 0.00 41.62 2.17
733 734 3.428589 GCCTACGGTGACTTCGTAAATCT 60.429 47.826 0.00 0.00 41.62 2.40
734 735 4.349501 CCTACGGTGACTTCGTAAATCTC 58.650 47.826 0.00 0.00 41.62 2.75
735 736 3.928727 ACGGTGACTTCGTAAATCTCA 57.071 42.857 0.00 0.00 39.22 3.27
736 737 4.247267 ACGGTGACTTCGTAAATCTCAA 57.753 40.909 0.00 0.00 39.22 3.02
737 738 4.235360 ACGGTGACTTCGTAAATCTCAAG 58.765 43.478 0.00 0.00 39.22 3.02
738 739 4.022589 ACGGTGACTTCGTAAATCTCAAGA 60.023 41.667 0.00 0.00 39.22 3.02
739 740 5.103000 CGGTGACTTCGTAAATCTCAAGAT 58.897 41.667 0.00 0.00 36.07 2.40
740 741 5.004821 CGGTGACTTCGTAAATCTCAAGATG 59.995 44.000 0.00 0.00 34.49 2.90
741 742 6.100004 GGTGACTTCGTAAATCTCAAGATGA 58.900 40.000 0.00 0.00 34.49 2.92
742 743 6.758886 GGTGACTTCGTAAATCTCAAGATGAT 59.241 38.462 0.00 0.00 34.49 2.45
743 744 7.921214 GGTGACTTCGTAAATCTCAAGATGATA 59.079 37.037 0.00 0.00 34.49 2.15
744 745 9.469807 GTGACTTCGTAAATCTCAAGATGATAT 57.530 33.333 0.00 0.00 34.49 1.63
745 746 9.468532 TGACTTCGTAAATCTCAAGATGATATG 57.531 33.333 0.00 0.00 34.49 1.78
746 747 8.304202 ACTTCGTAAATCTCAAGATGATATGC 57.696 34.615 0.00 0.00 34.49 3.14
747 748 7.386299 ACTTCGTAAATCTCAAGATGATATGCC 59.614 37.037 0.00 0.00 34.49 4.40
748 749 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
749 750 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
750 751 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
751 752 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
752 753 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
753 754 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
754 755 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
755 756 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
756 757 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
757 758 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
758 759 0.676184 TGATATGCCGGCTCAGTCTC 59.324 55.000 29.70 15.31 0.00 3.36
759 760 0.965439 GATATGCCGGCTCAGTCTCT 59.035 55.000 29.70 3.16 0.00 3.10
760 761 0.965439 ATATGCCGGCTCAGTCTCTC 59.035 55.000 29.70 0.00 0.00 3.20
761 762 0.395724 TATGCCGGCTCAGTCTCTCA 60.396 55.000 29.70 2.45 0.00 3.27
762 763 1.674764 ATGCCGGCTCAGTCTCTCAG 61.675 60.000 29.70 0.00 0.00 3.35
763 764 2.049185 GCCGGCTCAGTCTCTCAGA 61.049 63.158 22.15 0.00 0.00 3.27
764 765 2.003658 GCCGGCTCAGTCTCTCAGAG 62.004 65.000 22.15 0.00 33.62 3.35
765 766 0.393673 CCGGCTCAGTCTCTCAGAGA 60.394 60.000 0.00 0.00 36.22 3.10
766 767 1.679139 CGGCTCAGTCTCTCAGAGAT 58.321 55.000 7.89 0.00 40.98 2.75
767 768 1.334556 CGGCTCAGTCTCTCAGAGATG 59.665 57.143 7.89 7.62 40.98 2.90
768 769 1.067516 GGCTCAGTCTCTCAGAGATGC 59.932 57.143 7.89 10.04 40.98 3.91
769 770 2.026641 GCTCAGTCTCTCAGAGATGCT 58.973 52.381 7.89 0.00 40.98 3.79
770 771 2.033801 GCTCAGTCTCTCAGAGATGCTC 59.966 54.545 7.89 0.00 40.98 4.26
771 772 3.281158 CTCAGTCTCTCAGAGATGCTCA 58.719 50.000 7.89 0.00 40.98 4.26
772 773 3.887110 CTCAGTCTCTCAGAGATGCTCAT 59.113 47.826 7.89 0.00 40.98 2.90
773 774 4.279982 TCAGTCTCTCAGAGATGCTCATT 58.720 43.478 7.89 0.00 40.98 2.57
774 775 4.098196 TCAGTCTCTCAGAGATGCTCATTG 59.902 45.833 7.89 0.00 40.98 2.82
775 776 3.385433 AGTCTCTCAGAGATGCTCATTGG 59.615 47.826 7.89 0.00 40.98 3.16
776 777 2.699321 TCTCTCAGAGATGCTCATTGGG 59.301 50.000 0.00 0.00 33.35 4.12
777 778 2.699321 CTCTCAGAGATGCTCATTGGGA 59.301 50.000 0.00 0.00 32.06 4.37
778 779 3.315596 TCTCAGAGATGCTCATTGGGAT 58.684 45.455 0.00 0.00 32.06 3.85
779 780 4.486839 TCTCAGAGATGCTCATTGGGATA 58.513 43.478 0.00 0.00 32.06 2.59
780 781 4.527427 TCTCAGAGATGCTCATTGGGATAG 59.473 45.833 0.00 0.00 32.06 2.08
781 782 3.581770 TCAGAGATGCTCATTGGGATAGG 59.418 47.826 0.00 0.00 32.06 2.57
782 783 2.911636 AGAGATGCTCATTGGGATAGGG 59.088 50.000 0.00 0.00 32.06 3.53
783 784 2.641815 GAGATGCTCATTGGGATAGGGT 59.358 50.000 0.00 0.00 0.00 4.34
784 785 2.374504 AGATGCTCATTGGGATAGGGTG 59.625 50.000 0.00 0.00 0.00 4.61
785 786 1.595311 TGCTCATTGGGATAGGGTGT 58.405 50.000 0.00 0.00 0.00 4.16
786 787 1.212688 TGCTCATTGGGATAGGGTGTG 59.787 52.381 0.00 0.00 0.00 3.82
787 788 1.972872 CTCATTGGGATAGGGTGTGC 58.027 55.000 0.00 0.00 0.00 4.57
788 789 0.180171 TCATTGGGATAGGGTGTGCG 59.820 55.000 0.00 0.00 0.00 5.34
789 790 0.107214 CATTGGGATAGGGTGTGCGT 60.107 55.000 0.00 0.00 0.00 5.24
790 791 0.107214 ATTGGGATAGGGTGTGCGTG 60.107 55.000 0.00 0.00 0.00 5.34
791 792 1.485294 TTGGGATAGGGTGTGCGTGT 61.485 55.000 0.00 0.00 0.00 4.49
792 793 1.449601 GGGATAGGGTGTGCGTGTG 60.450 63.158 0.00 0.00 0.00 3.82
793 794 1.295423 GGATAGGGTGTGCGTGTGT 59.705 57.895 0.00 0.00 0.00 3.72
794 795 1.019278 GGATAGGGTGTGCGTGTGTG 61.019 60.000 0.00 0.00 0.00 3.82
795 796 1.635663 GATAGGGTGTGCGTGTGTGC 61.636 60.000 0.00 0.00 0.00 4.57
798 799 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
799 800 2.099446 GTGTGCGTGTGTGCGTTT 59.901 55.556 0.00 0.00 37.81 3.60
800 801 1.348938 GTGTGCGTGTGTGCGTTTA 59.651 52.632 0.00 0.00 37.81 2.01
801 802 0.041663 GTGTGCGTGTGTGCGTTTAT 60.042 50.000 0.00 0.00 37.81 1.40
802 803 1.192757 GTGTGCGTGTGTGCGTTTATA 59.807 47.619 0.00 0.00 37.81 0.98
803 804 1.457683 TGTGCGTGTGTGCGTTTATAG 59.542 47.619 0.00 0.00 37.81 1.31
804 805 1.072391 TGCGTGTGTGCGTTTATAGG 58.928 50.000 0.00 0.00 37.81 2.57
805 806 0.372334 GCGTGTGTGCGTTTATAGGG 59.628 55.000 0.00 0.00 0.00 3.53
806 807 1.999048 CGTGTGTGCGTTTATAGGGA 58.001 50.000 0.00 0.00 0.00 4.20
807 808 2.546778 CGTGTGTGCGTTTATAGGGAT 58.453 47.619 0.00 0.00 0.00 3.85
808 809 2.284150 CGTGTGTGCGTTTATAGGGATG 59.716 50.000 0.00 0.00 0.00 3.51
809 810 3.527533 GTGTGTGCGTTTATAGGGATGA 58.472 45.455 0.00 0.00 0.00 2.92
810 811 3.555956 GTGTGTGCGTTTATAGGGATGAG 59.444 47.826 0.00 0.00 0.00 2.90
811 812 3.196901 TGTGTGCGTTTATAGGGATGAGT 59.803 43.478 0.00 0.00 0.00 3.41
812 813 3.555956 GTGTGCGTTTATAGGGATGAGTG 59.444 47.826 0.00 0.00 0.00 3.51
813 814 3.196901 TGTGCGTTTATAGGGATGAGTGT 59.803 43.478 0.00 0.00 0.00 3.55
814 815 4.403113 TGTGCGTTTATAGGGATGAGTGTA 59.597 41.667 0.00 0.00 0.00 2.90
815 816 5.069914 TGTGCGTTTATAGGGATGAGTGTAT 59.930 40.000 0.00 0.00 0.00 2.29
816 817 5.405571 GTGCGTTTATAGGGATGAGTGTATG 59.594 44.000 0.00 0.00 0.00 2.39
817 818 4.389077 GCGTTTATAGGGATGAGTGTATGC 59.611 45.833 0.00 0.00 0.00 3.14
818 819 4.621460 CGTTTATAGGGATGAGTGTATGCG 59.379 45.833 0.00 0.00 0.00 4.73
819 820 2.751166 ATAGGGATGAGTGTATGCGC 57.249 50.000 0.00 0.00 0.00 6.09
820 821 0.313987 TAGGGATGAGTGTATGCGCG 59.686 55.000 0.00 0.00 0.00 6.86
821 822 1.227263 GGGATGAGTGTATGCGCGT 60.227 57.895 8.43 7.55 0.00 6.01
822 823 1.490693 GGGATGAGTGTATGCGCGTG 61.491 60.000 13.61 0.00 0.00 5.34
823 824 0.806102 GGATGAGTGTATGCGCGTGT 60.806 55.000 13.61 0.00 0.00 4.49
824 825 1.535226 GGATGAGTGTATGCGCGTGTA 60.535 52.381 13.61 0.00 0.00 2.90
825 826 2.394708 GATGAGTGTATGCGCGTGTAT 58.605 47.619 13.61 4.63 0.00 2.29
826 827 3.561503 GATGAGTGTATGCGCGTGTATA 58.438 45.455 13.61 2.40 0.00 1.47
827 828 3.636282 TGAGTGTATGCGCGTGTATAT 57.364 42.857 13.61 0.00 0.00 0.86
828 829 3.305110 TGAGTGTATGCGCGTGTATATG 58.695 45.455 13.61 0.00 0.00 1.78
829 830 3.003897 TGAGTGTATGCGCGTGTATATGA 59.996 43.478 13.61 0.00 0.00 2.15
830 831 3.565516 AGTGTATGCGCGTGTATATGAG 58.434 45.455 13.61 0.00 0.00 2.90
831 832 2.090658 GTGTATGCGCGTGTATATGAGC 59.909 50.000 13.61 0.41 38.85 4.26
834 835 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
835 836 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
836 837 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
837 838 1.209128 GCGTGTATATGAGCGCTTGT 58.791 50.000 13.26 5.98 45.48 3.16
838 839 1.071239 GCGTGTATATGAGCGCTTGTG 60.071 52.381 13.26 0.00 45.48 3.33
839 840 2.193447 CGTGTATATGAGCGCTTGTGT 58.807 47.619 13.26 4.27 0.00 3.72
840 841 2.216488 CGTGTATATGAGCGCTTGTGTC 59.784 50.000 13.26 0.00 0.00 3.67
841 842 3.448686 GTGTATATGAGCGCTTGTGTCT 58.551 45.455 13.26 0.00 0.00 3.41
842 843 3.243877 GTGTATATGAGCGCTTGTGTCTG 59.756 47.826 13.26 0.00 0.00 3.51
843 844 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
844 845 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
845 846 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
846 847 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
847 848 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
848 849 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.000 2.64 0.00 0.00 3.41
849 850 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
850 851 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
851 852 1.391485 CGCTTGTGTCTGTACTGATGC 59.609 52.381 5.69 3.20 0.00 3.91
852 853 2.693069 GCTTGTGTCTGTACTGATGCT 58.307 47.619 5.69 0.00 0.00 3.79
853 854 3.673323 CGCTTGTGTCTGTACTGATGCTA 60.673 47.826 5.69 0.00 0.00 3.49
854 855 4.245660 GCTTGTGTCTGTACTGATGCTAA 58.754 43.478 5.69 0.07 0.00 3.09
855 856 4.690748 GCTTGTGTCTGTACTGATGCTAAA 59.309 41.667 5.69 0.00 0.00 1.85
856 857 5.179368 GCTTGTGTCTGTACTGATGCTAAAA 59.821 40.000 5.69 0.00 0.00 1.52
857 858 6.293407 GCTTGTGTCTGTACTGATGCTAAAAA 60.293 38.462 5.69 0.00 0.00 1.94
873 874 1.362355 AAAAACAAAGAGGCGGGCG 59.638 52.632 0.00 0.00 0.00 6.13
874 875 1.388837 AAAAACAAAGAGGCGGGCGT 61.389 50.000 0.00 0.00 0.00 5.68
875 876 0.535553 AAAACAAAGAGGCGGGCGTA 60.536 50.000 0.00 0.00 0.00 4.42
876 877 1.232621 AAACAAAGAGGCGGGCGTAC 61.233 55.000 0.00 0.00 0.00 3.67
877 878 3.186047 CAAAGAGGCGGGCGTACG 61.186 66.667 11.84 11.84 0.00 3.67
878 879 3.376078 AAAGAGGCGGGCGTACGA 61.376 61.111 21.65 0.00 35.47 3.43
879 880 2.718073 AAAGAGGCGGGCGTACGAT 61.718 57.895 21.65 0.00 35.47 3.73
880 881 1.386525 AAAGAGGCGGGCGTACGATA 61.387 55.000 21.65 0.00 35.47 2.92
881 882 1.177256 AAGAGGCGGGCGTACGATAT 61.177 55.000 21.65 0.00 35.47 1.63
882 883 0.321919 AGAGGCGGGCGTACGATATA 60.322 55.000 21.65 0.00 35.47 0.86
883 884 0.737219 GAGGCGGGCGTACGATATAT 59.263 55.000 21.65 0.00 35.47 0.86
884 885 1.133790 GAGGCGGGCGTACGATATATT 59.866 52.381 21.65 0.00 35.47 1.28
885 886 1.547372 AGGCGGGCGTACGATATATTT 59.453 47.619 21.65 0.00 35.47 1.40
886 887 1.657094 GGCGGGCGTACGATATATTTG 59.343 52.381 21.65 0.00 35.47 2.32
887 888 1.060122 GCGGGCGTACGATATATTTGC 59.940 52.381 21.65 6.67 35.47 3.68
888 889 2.602878 CGGGCGTACGATATATTTGCT 58.397 47.619 21.65 0.00 35.47 3.91
889 890 2.344441 CGGGCGTACGATATATTTGCTG 59.656 50.000 21.65 0.00 35.47 4.41
890 891 3.581755 GGGCGTACGATATATTTGCTGA 58.418 45.455 21.65 0.00 0.00 4.26
891 892 3.991773 GGGCGTACGATATATTTGCTGAA 59.008 43.478 21.65 0.00 0.00 3.02
892 893 4.449743 GGGCGTACGATATATTTGCTGAAA 59.550 41.667 21.65 0.00 0.00 2.69
893 894 5.049954 GGGCGTACGATATATTTGCTGAAAA 60.050 40.000 21.65 0.00 0.00 2.29
894 895 6.423862 GGCGTACGATATATTTGCTGAAAAA 58.576 36.000 21.65 0.00 0.00 1.94
895 896 6.356190 GGCGTACGATATATTTGCTGAAAAAC 59.644 38.462 21.65 0.00 0.00 2.43
896 897 6.902948 GCGTACGATATATTTGCTGAAAAACA 59.097 34.615 21.65 0.00 0.00 2.83
897 898 7.427030 GCGTACGATATATTTGCTGAAAAACAA 59.573 33.333 21.65 0.00 0.00 2.83
898 899 8.933955 CGTACGATATATTTGCTGAAAAACAAG 58.066 33.333 10.44 0.00 0.00 3.16
899 900 9.982291 GTACGATATATTTGCTGAAAAACAAGA 57.018 29.630 0.00 0.00 0.00 3.02
901 902 9.906660 ACGATATATTTGCTGAAAAACAAGAAA 57.093 25.926 0.00 0.00 0.00 2.52
904 905 5.739752 ATTTGCTGAAAAACAAGAAAGGC 57.260 34.783 0.00 0.00 0.00 4.35
905 906 2.808244 TGCTGAAAAACAAGAAAGGCG 58.192 42.857 0.00 0.00 0.00 5.52
906 907 2.425312 TGCTGAAAAACAAGAAAGGCGA 59.575 40.909 0.00 0.00 0.00 5.54
907 908 3.045688 GCTGAAAAACAAGAAAGGCGAG 58.954 45.455 0.00 0.00 0.00 5.03
908 909 3.045688 CTGAAAAACAAGAAAGGCGAGC 58.954 45.455 0.00 0.00 0.00 5.03
909 910 2.044135 GAAAAACAAGAAAGGCGAGCG 58.956 47.619 0.00 0.00 0.00 5.03
910 911 1.021968 AAAACAAGAAAGGCGAGCGT 58.978 45.000 0.00 0.00 0.00 5.07
911 912 1.873698 AAACAAGAAAGGCGAGCGTA 58.126 45.000 0.00 0.00 0.00 4.42
912 913 1.145803 AACAAGAAAGGCGAGCGTAC 58.854 50.000 0.00 0.00 0.00 3.67
913 914 1.007336 ACAAGAAAGGCGAGCGTACG 61.007 55.000 11.84 11.84 0.00 3.67
914 915 1.445582 AAGAAAGGCGAGCGTACGG 60.446 57.895 18.39 1.04 0.00 4.02
915 916 2.126189 GAAAGGCGAGCGTACGGT 60.126 61.111 21.51 21.51 0.00 4.83
916 917 1.137404 GAAAGGCGAGCGTACGGTA 59.863 57.895 21.38 0.00 0.00 4.02
917 918 0.248784 GAAAGGCGAGCGTACGGTAT 60.249 55.000 21.38 4.04 0.00 2.73
918 919 1.002468 GAAAGGCGAGCGTACGGTATA 60.002 52.381 21.38 0.00 0.00 1.47
919 920 1.024271 AAGGCGAGCGTACGGTATAA 58.976 50.000 21.38 0.00 0.00 0.98
920 921 0.308993 AGGCGAGCGTACGGTATAAC 59.691 55.000 21.38 10.98 0.00 1.89
921 922 0.308993 GGCGAGCGTACGGTATAACT 59.691 55.000 21.38 5.13 0.00 2.24
922 923 1.661460 GGCGAGCGTACGGTATAACTC 60.661 57.143 21.38 13.47 0.00 3.01
923 924 1.929569 CGAGCGTACGGTATAACTCG 58.070 55.000 21.38 20.86 40.70 4.18
924 925 1.668043 GAGCGTACGGTATAACTCGC 58.332 55.000 21.38 10.87 43.16 5.03
925 926 0.308993 AGCGTACGGTATAACTCGCC 59.691 55.000 19.91 0.00 43.73 5.54
926 927 0.029300 GCGTACGGTATAACTCGCCA 59.971 55.000 18.39 0.00 38.16 5.69
927 928 1.335324 GCGTACGGTATAACTCGCCAT 60.335 52.381 18.39 0.00 38.16 4.40
928 929 2.095768 GCGTACGGTATAACTCGCCATA 60.096 50.000 18.39 0.00 38.16 2.74
929 930 3.740590 CGTACGGTATAACTCGCCATAG 58.259 50.000 7.57 0.00 0.00 2.23
930 931 3.425359 CGTACGGTATAACTCGCCATAGG 60.425 52.174 7.57 0.00 0.00 2.57
931 932 1.271656 ACGGTATAACTCGCCATAGGC 59.728 52.381 0.00 0.00 46.75 3.93
943 944 3.341857 GCCATAGGCGAGATATAGACG 57.658 52.381 0.00 0.00 39.62 4.18
944 945 2.683867 GCCATAGGCGAGATATAGACGT 59.316 50.000 0.00 0.00 39.62 4.34
945 946 3.242804 GCCATAGGCGAGATATAGACGTC 60.243 52.174 7.70 7.70 39.62 4.34
946 947 3.001431 CCATAGGCGAGATATAGACGTCG 59.999 52.174 10.46 0.00 36.74 5.12
950 951 2.127988 CGAGATATAGACGTCGCGAC 57.872 55.000 28.96 28.96 39.49 5.19
951 952 1.454653 CGAGATATAGACGTCGCGACA 59.545 52.381 35.71 19.14 39.49 4.35
952 953 2.092368 CGAGATATAGACGTCGCGACAT 59.908 50.000 35.71 25.05 39.49 3.06
953 954 3.661819 GAGATATAGACGTCGCGACATC 58.338 50.000 35.71 31.32 0.00 3.06
954 955 2.092368 AGATATAGACGTCGCGACATCG 59.908 50.000 35.71 25.46 43.27 3.84
955 956 1.490621 TATAGACGTCGCGACATCGA 58.509 50.000 35.71 27.97 43.02 3.59
956 957 0.654160 ATAGACGTCGCGACATCGAA 59.346 50.000 35.71 24.45 43.02 3.71
957 958 0.247419 TAGACGTCGCGACATCGAAC 60.247 55.000 35.71 20.80 43.02 3.95
958 959 1.794785 GACGTCGCGACATCGAACA 60.795 57.895 35.71 0.00 43.02 3.18
959 960 1.132199 GACGTCGCGACATCGAACAT 61.132 55.000 35.71 12.20 43.02 2.71
963 964 1.007011 GTCGCGACATCGAACATCAAG 60.007 52.381 33.09 0.00 43.02 3.02
996 998 3.528370 CGCCTCCACCTAGGACCG 61.528 72.222 17.98 3.03 43.07 4.79
1034 1036 2.450609 TTAAAGCTCTCACGGTCACC 57.549 50.000 0.00 0.00 0.00 4.02
1080 1082 2.951745 CGCTTCGCTCGTAGCCTG 60.952 66.667 13.69 0.00 38.18 4.85
1111 1113 1.144057 CGCACTGGAGATACCACCC 59.856 63.158 0.00 0.00 44.64 4.61
1290 1299 1.562008 TCCGCCCTGGTAATCAATCAA 59.438 47.619 0.00 0.00 39.52 2.57
1296 1305 5.530915 CGCCCTGGTAATCAATCAATCTTTA 59.469 40.000 0.00 0.00 0.00 1.85
1333 1342 1.069703 CACATCTTGGTTGTCAGCACG 60.070 52.381 0.00 0.00 0.00 5.34
1412 1421 0.677414 AGAAGGACCTCGTCTCGGAC 60.677 60.000 0.00 0.00 32.47 4.79
1685 1694 1.226888 GGTCACGGCGATCTGTACC 60.227 63.158 16.62 7.77 0.00 3.34
1760 1769 2.488153 GGATTCCTGAAGAAACGGTTGG 59.512 50.000 0.00 0.00 38.21 3.77
1761 1770 1.975660 TTCCTGAAGAAACGGTTGGG 58.024 50.000 0.00 0.00 0.00 4.12
1818 1827 9.739276 AAGACAAGTAATTGAGGACATTATTGA 57.261 29.630 10.35 0.00 0.00 2.57
1833 1842 7.116075 ACATTATTGATGTAATTTGCCAGCT 57.884 32.000 0.00 0.00 47.00 4.24
1878 1890 4.023707 GCTTGGTAGATGGTAATCATGTGC 60.024 45.833 0.00 0.00 35.97 4.57
1988 2023 2.124151 GATGCGGGGATGGCAACT 60.124 61.111 0.00 0.00 44.66 3.16
2011 2077 3.411446 CTGGTTTCTTCCACACTATGCA 58.589 45.455 0.00 0.00 33.55 3.96
2015 2082 5.186198 GGTTTCTTCCACACTATGCATACT 58.814 41.667 1.16 0.00 0.00 2.12
2072 2139 5.473846 CCTTATAGAGCTAGATGTTGTCGGA 59.526 44.000 0.00 0.00 0.00 4.55
2098 2577 4.952957 TCTCCACTGTTTTCCAAACATTGA 59.047 37.500 16.90 7.80 34.11 2.57
2180 2660 1.380302 AGGCATTCCCTCGTGCTTT 59.620 52.632 0.00 0.00 41.21 3.51
2228 2722 1.003839 GTGGATTCTGGTGTCGGCA 60.004 57.895 0.00 0.00 0.00 5.69
2277 2771 0.650512 CGTCGTTTCACAGTGTGCTT 59.349 50.000 18.80 0.00 32.98 3.91
2315 2812 3.056250 CGTCCCATCATATCTCTTCCCTG 60.056 52.174 0.00 0.00 0.00 4.45
2466 3013 1.430228 GTCGTGTGTGGCGGTTTTT 59.570 52.632 0.00 0.00 0.00 1.94
2470 3017 0.387565 GTGTGTGGCGGTTTTTCCAT 59.612 50.000 0.00 0.00 34.47 3.41
2524 3071 1.016130 CCTGCGTGTGCTTCCTACTG 61.016 60.000 0.00 0.00 43.34 2.74
2537 3084 0.394352 CCTACTGCCCCATGGTTCAC 60.394 60.000 11.73 0.00 0.00 3.18
2685 3232 2.234908 AGTTGTAGACTCATCCCTGTGC 59.765 50.000 0.00 0.00 31.20 4.57
2714 3261 3.327757 TCACTCTTATGCCAACTCCAACT 59.672 43.478 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 86 9.500785 ACATTTATTTTGAAATCGGGAACATTT 57.499 25.926 0.00 0.00 0.00 2.32
86 87 9.500785 AACATTTATTTTGAAATCGGGAACATT 57.499 25.926 0.00 0.00 0.00 2.71
87 88 9.150348 GAACATTTATTTTGAAATCGGGAACAT 57.850 29.630 0.00 0.00 0.00 2.71
88 89 8.144478 TGAACATTTATTTTGAAATCGGGAACA 58.856 29.630 0.00 0.00 0.00 3.18
89 90 8.527567 TGAACATTTATTTTGAAATCGGGAAC 57.472 30.769 0.00 0.00 0.00 3.62
90 91 9.149225 CATGAACATTTATTTTGAAATCGGGAA 57.851 29.630 0.00 0.00 0.00 3.97
91 92 8.526978 TCATGAACATTTATTTTGAAATCGGGA 58.473 29.630 0.00 0.00 0.00 5.14
92 93 8.700722 TCATGAACATTTATTTTGAAATCGGG 57.299 30.769 0.00 0.00 0.00 5.14
93 94 9.357652 ACTCATGAACATTTATTTTGAAATCGG 57.642 29.630 0.00 0.00 0.00 4.18
266 267 9.684448 TCTTTTGAAAATGCGTGAACATTTATA 57.316 25.926 3.16 0.00 46.80 0.98
267 268 8.586570 TCTTTTGAAAATGCGTGAACATTTAT 57.413 26.923 3.16 0.00 46.80 1.40
268 269 7.993821 TCTTTTGAAAATGCGTGAACATTTA 57.006 28.000 3.16 0.00 46.80 1.40
270 271 6.900568 TTCTTTTGAAAATGCGTGAACATT 57.099 29.167 0.00 0.00 42.01 2.71
271 272 6.900568 TTTCTTTTGAAAATGCGTGAACAT 57.099 29.167 0.00 0.00 44.51 2.71
290 291 9.508642 TGTGGTTTTTAAAATTGAGGTTTTTCT 57.491 25.926 0.55 0.00 33.62 2.52
410 411 9.936759 TCTTTTGATCCTTTTGTGTTTACTTTT 57.063 25.926 0.00 0.00 0.00 2.27
411 412 9.586435 CTCTTTTGATCCTTTTGTGTTTACTTT 57.414 29.630 0.00 0.00 0.00 2.66
412 413 8.966868 TCTCTTTTGATCCTTTTGTGTTTACTT 58.033 29.630 0.00 0.00 0.00 2.24
413 414 8.519799 TCTCTTTTGATCCTTTTGTGTTTACT 57.480 30.769 0.00 0.00 0.00 2.24
414 415 9.581099 TTTCTCTTTTGATCCTTTTGTGTTTAC 57.419 29.630 0.00 0.00 0.00 2.01
416 417 9.500785 TTTTTCTCTTTTGATCCTTTTGTGTTT 57.499 25.926 0.00 0.00 0.00 2.83
417 418 9.154847 CTTTTTCTCTTTTGATCCTTTTGTGTT 57.845 29.630 0.00 0.00 0.00 3.32
418 419 8.531146 TCTTTTTCTCTTTTGATCCTTTTGTGT 58.469 29.630 0.00 0.00 0.00 3.72
419 420 8.931385 TCTTTTTCTCTTTTGATCCTTTTGTG 57.069 30.769 0.00 0.00 0.00 3.33
420 421 9.942850 TTTCTTTTTCTCTTTTGATCCTTTTGT 57.057 25.926 0.00 0.00 0.00 2.83
425 426 9.551734 CCATTTTTCTTTTTCTCTTTTGATCCT 57.448 29.630 0.00 0.00 0.00 3.24
426 427 9.546428 TCCATTTTTCTTTTTCTCTTTTGATCC 57.454 29.630 0.00 0.00 0.00 3.36
439 440 9.958180 TCCTTTTCTTTTCTCCATTTTTCTTTT 57.042 25.926 0.00 0.00 0.00 2.27
440 441 9.958180 TTCCTTTTCTTTTCTCCATTTTTCTTT 57.042 25.926 0.00 0.00 0.00 2.52
441 442 9.958180 TTTCCTTTTCTTTTCTCCATTTTTCTT 57.042 25.926 0.00 0.00 0.00 2.52
442 443 9.605275 CTTTCCTTTTCTTTTCTCCATTTTTCT 57.395 29.630 0.00 0.00 0.00 2.52
443 444 9.599866 TCTTTCCTTTTCTTTTCTCCATTTTTC 57.400 29.630 0.00 0.00 0.00 2.29
444 445 9.958180 TTCTTTCCTTTTCTTTTCTCCATTTTT 57.042 25.926 0.00 0.00 0.00 1.94
445 446 9.958180 TTTCTTTCCTTTTCTTTTCTCCATTTT 57.042 25.926 0.00 0.00 0.00 1.82
446 447 9.958180 TTTTCTTTCCTTTTCTTTTCTCCATTT 57.042 25.926 0.00 0.00 0.00 2.32
447 448 9.958180 TTTTTCTTTCCTTTTCTTTTCTCCATT 57.042 25.926 0.00 0.00 0.00 3.16
489 490 1.669795 GCCATAAGCGCTGCTGTTTTT 60.670 47.619 12.58 0.00 39.62 1.94
490 491 0.109132 GCCATAAGCGCTGCTGTTTT 60.109 50.000 12.58 0.00 39.62 2.43
491 492 1.508088 GCCATAAGCGCTGCTGTTT 59.492 52.632 12.58 0.00 39.62 2.83
492 493 3.190878 GCCATAAGCGCTGCTGTT 58.809 55.556 12.58 0.00 39.62 3.16
501 502 2.031682 CAGAAACCTATGCGCCATAAGC 60.032 50.000 4.18 0.00 38.52 3.09
502 503 2.031682 GCAGAAACCTATGCGCCATAAG 60.032 50.000 4.18 0.00 31.87 1.73
503 504 1.946768 GCAGAAACCTATGCGCCATAA 59.053 47.619 4.18 0.00 31.87 1.90
504 505 1.593196 GCAGAAACCTATGCGCCATA 58.407 50.000 4.18 1.97 31.87 2.74
505 506 1.103398 GGCAGAAACCTATGCGCCAT 61.103 55.000 4.18 0.63 43.49 4.40
506 507 1.748879 GGCAGAAACCTATGCGCCA 60.749 57.895 4.18 0.00 43.49 5.69
507 508 1.312371 TTGGCAGAAACCTATGCGCC 61.312 55.000 4.18 0.00 43.49 6.53
508 509 0.099436 CTTGGCAGAAACCTATGCGC 59.901 55.000 0.00 0.00 43.49 6.09
509 510 0.099436 GCTTGGCAGAAACCTATGCG 59.901 55.000 0.00 0.00 43.49 4.73
510 511 0.099436 CGCTTGGCAGAAACCTATGC 59.901 55.000 0.00 0.00 41.80 3.14
511 512 0.099436 GCGCTTGGCAGAAACCTATG 59.901 55.000 0.00 0.00 42.87 2.23
512 513 1.032114 GGCGCTTGGCAGAAACCTAT 61.032 55.000 7.64 0.00 46.16 2.57
513 514 1.674322 GGCGCTTGGCAGAAACCTA 60.674 57.895 7.64 0.00 46.16 3.08
514 515 2.985847 GGCGCTTGGCAGAAACCT 60.986 61.111 7.64 0.00 46.16 3.50
515 516 4.056125 GGGCGCTTGGCAGAAACC 62.056 66.667 7.64 0.00 46.16 3.27
516 517 2.982744 GAGGGCGCTTGGCAGAAAC 61.983 63.158 7.64 0.00 46.16 2.78
517 518 2.672996 GAGGGCGCTTGGCAGAAA 60.673 61.111 7.64 0.00 46.16 2.52
520 521 2.721971 ATATCGAGGGCGCTTGGCAG 62.722 60.000 17.39 2.11 46.16 4.85
521 522 2.807107 ATATCGAGGGCGCTTGGCA 61.807 57.895 17.39 6.56 46.16 4.92
522 523 2.031163 ATATCGAGGGCGCTTGGC 59.969 61.111 17.39 0.00 42.51 4.52
523 524 0.532862 AACATATCGAGGGCGCTTGG 60.533 55.000 17.39 7.26 37.46 3.61
524 525 1.792949 GTAACATATCGAGGGCGCTTG 59.207 52.381 11.80 11.80 37.46 4.01
525 526 1.687123 AGTAACATATCGAGGGCGCTT 59.313 47.619 7.64 0.00 37.46 4.68
526 527 1.269998 GAGTAACATATCGAGGGCGCT 59.730 52.381 7.64 1.38 37.46 5.92
527 528 1.699343 GAGTAACATATCGAGGGCGC 58.301 55.000 0.00 0.00 37.46 6.53
528 529 1.534163 TCGAGTAACATATCGAGGGCG 59.466 52.381 0.00 0.00 42.61 6.13
558 559 3.377656 TCAACCAGAGACGGCCTC 58.622 61.111 0.00 0.00 42.28 4.70
566 567 4.406972 TCCACCTAATCATCTCAACCAGAG 59.593 45.833 0.00 0.00 46.14 3.35
567 568 4.162320 GTCCACCTAATCATCTCAACCAGA 59.838 45.833 0.00 0.00 34.78 3.86
568 569 4.080919 TGTCCACCTAATCATCTCAACCAG 60.081 45.833 0.00 0.00 0.00 4.00
569 570 3.843619 TGTCCACCTAATCATCTCAACCA 59.156 43.478 0.00 0.00 0.00 3.67
570 571 4.080863 ACTGTCCACCTAATCATCTCAACC 60.081 45.833 0.00 0.00 0.00 3.77
571 572 4.872691 CACTGTCCACCTAATCATCTCAAC 59.127 45.833 0.00 0.00 0.00 3.18
572 573 4.080919 CCACTGTCCACCTAATCATCTCAA 60.081 45.833 0.00 0.00 0.00 3.02
573 574 3.452264 CCACTGTCCACCTAATCATCTCA 59.548 47.826 0.00 0.00 0.00 3.27
574 575 3.452627 ACCACTGTCCACCTAATCATCTC 59.547 47.826 0.00 0.00 0.00 2.75
575 576 3.454858 ACCACTGTCCACCTAATCATCT 58.545 45.455 0.00 0.00 0.00 2.90
576 577 3.914426 ACCACTGTCCACCTAATCATC 57.086 47.619 0.00 0.00 0.00 2.92
577 578 5.219739 AGATACCACTGTCCACCTAATCAT 58.780 41.667 0.00 0.00 0.00 2.45
578 579 4.620723 AGATACCACTGTCCACCTAATCA 58.379 43.478 0.00 0.00 0.00 2.57
579 580 4.261656 CGAGATACCACTGTCCACCTAATC 60.262 50.000 0.00 0.00 0.00 1.75
580 581 3.637229 CGAGATACCACTGTCCACCTAAT 59.363 47.826 0.00 0.00 0.00 1.73
581 582 3.021695 CGAGATACCACTGTCCACCTAA 58.978 50.000 0.00 0.00 0.00 2.69
582 583 2.651455 CGAGATACCACTGTCCACCTA 58.349 52.381 0.00 0.00 0.00 3.08
583 584 1.475403 CGAGATACCACTGTCCACCT 58.525 55.000 0.00 0.00 0.00 4.00
584 585 0.179108 GCGAGATACCACTGTCCACC 60.179 60.000 0.00 0.00 0.00 4.61
585 586 0.530744 TGCGAGATACCACTGTCCAC 59.469 55.000 0.00 0.00 0.00 4.02
586 587 1.067142 GTTGCGAGATACCACTGTCCA 60.067 52.381 0.00 0.00 0.00 4.02
587 588 1.641577 GTTGCGAGATACCACTGTCC 58.358 55.000 0.00 0.00 0.00 4.02
588 589 1.641577 GGTTGCGAGATACCACTGTC 58.358 55.000 0.00 0.00 34.48 3.51
589 590 0.249398 GGGTTGCGAGATACCACTGT 59.751 55.000 0.00 0.00 36.10 3.55
590 591 0.249120 TGGGTTGCGAGATACCACTG 59.751 55.000 0.00 0.00 36.10 3.66
591 592 0.249398 GTGGGTTGCGAGATACCACT 59.751 55.000 0.00 0.00 46.12 4.00
592 593 2.763651 GTGGGTTGCGAGATACCAC 58.236 57.895 0.00 0.00 43.98 4.16
593 594 1.195442 TGGTGGGTTGCGAGATACCA 61.195 55.000 0.00 0.00 36.10 3.25
594 595 0.462047 CTGGTGGGTTGCGAGATACC 60.462 60.000 0.00 0.00 0.00 2.73
595 596 0.462047 CCTGGTGGGTTGCGAGATAC 60.462 60.000 0.00 0.00 0.00 2.24
596 597 1.904771 CCTGGTGGGTTGCGAGATA 59.095 57.895 0.00 0.00 0.00 1.98
597 598 2.671070 CCTGGTGGGTTGCGAGAT 59.329 61.111 0.00 0.00 0.00 2.75
607 608 1.549203 CAGGATTTGAACCCTGGTGG 58.451 55.000 0.00 0.00 44.68 4.61
612 613 0.779997 AGCACCAGGATTTGAACCCT 59.220 50.000 0.00 0.00 0.00 4.34
613 614 1.177401 GAGCACCAGGATTTGAACCC 58.823 55.000 0.00 0.00 0.00 4.11
614 615 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
615 616 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
616 617 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
617 618 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
618 619 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
619 620 2.418368 TAATGCGAGCACCAGGATTT 57.582 45.000 0.00 0.00 31.11 2.17
620 621 2.645838 ATAATGCGAGCACCAGGATT 57.354 45.000 0.00 0.00 33.17 3.01
621 622 2.645838 AATAATGCGAGCACCAGGAT 57.354 45.000 0.00 0.00 0.00 3.24
622 623 2.092968 AGAAATAATGCGAGCACCAGGA 60.093 45.455 0.00 0.00 0.00 3.86
623 624 2.032550 CAGAAATAATGCGAGCACCAGG 59.967 50.000 0.00 0.00 0.00 4.45
624 625 2.032550 CCAGAAATAATGCGAGCACCAG 59.967 50.000 0.00 0.00 0.00 4.00
625 626 2.016318 CCAGAAATAATGCGAGCACCA 58.984 47.619 0.00 0.00 0.00 4.17
626 627 2.288666 TCCAGAAATAATGCGAGCACC 58.711 47.619 0.00 0.00 0.00 5.01
627 628 4.558538 AATCCAGAAATAATGCGAGCAC 57.441 40.909 0.00 0.00 0.00 4.40
628 629 6.882610 ATAAATCCAGAAATAATGCGAGCA 57.117 33.333 0.00 0.00 0.00 4.26
629 630 7.862372 TGAAATAAATCCAGAAATAATGCGAGC 59.138 33.333 0.00 0.00 0.00 5.03
630 631 9.390795 CTGAAATAAATCCAGAAATAATGCGAG 57.609 33.333 0.00 0.00 0.00 5.03
631 632 9.119418 TCTGAAATAAATCCAGAAATAATGCGA 57.881 29.630 0.00 0.00 34.38 5.10
632 633 9.734620 TTCTGAAATAAATCCAGAAATAATGCG 57.265 29.630 0.00 0.00 42.05 4.73
638 639 9.807649 CGGAAATTCTGAAATAAATCCAGAAAT 57.192 29.630 0.00 0.00 46.12 2.17
639 640 8.250332 CCGGAAATTCTGAAATAAATCCAGAAA 58.750 33.333 2.89 0.00 46.12 2.52
640 641 7.630513 GCCGGAAATTCTGAAATAAATCCAGAA 60.631 37.037 5.05 0.00 46.76 3.02
641 642 6.183360 GCCGGAAATTCTGAAATAAATCCAGA 60.183 38.462 5.05 0.00 35.38 3.86
642 643 5.979517 GCCGGAAATTCTGAAATAAATCCAG 59.020 40.000 5.05 0.00 0.00 3.86
643 644 5.449862 CGCCGGAAATTCTGAAATAAATCCA 60.450 40.000 5.05 0.00 0.00 3.41
644 645 4.976116 CGCCGGAAATTCTGAAATAAATCC 59.024 41.667 5.05 0.00 0.00 3.01
645 646 5.816919 TCGCCGGAAATTCTGAAATAAATC 58.183 37.500 5.05 0.00 0.00 2.17
646 647 5.828299 TCGCCGGAAATTCTGAAATAAAT 57.172 34.783 5.05 0.00 0.00 1.40
647 648 5.577835 CATCGCCGGAAATTCTGAAATAAA 58.422 37.500 5.05 0.00 0.00 1.40
648 649 4.497340 GCATCGCCGGAAATTCTGAAATAA 60.497 41.667 5.05 0.00 0.00 1.40
649 650 3.003275 GCATCGCCGGAAATTCTGAAATA 59.997 43.478 5.05 0.00 0.00 1.40
650 651 2.223572 GCATCGCCGGAAATTCTGAAAT 60.224 45.455 5.05 0.00 0.00 2.17
651 652 1.132262 GCATCGCCGGAAATTCTGAAA 59.868 47.619 5.05 0.00 0.00 2.69
652 653 0.732571 GCATCGCCGGAAATTCTGAA 59.267 50.000 5.05 0.00 0.00 3.02
653 654 1.428370 CGCATCGCCGGAAATTCTGA 61.428 55.000 5.05 0.00 0.00 3.27
654 655 1.010797 CGCATCGCCGGAAATTCTG 60.011 57.895 5.05 0.00 0.00 3.02
655 656 1.024579 AACGCATCGCCGGAAATTCT 61.025 50.000 5.05 0.00 0.00 2.40
656 657 0.179174 AAACGCATCGCCGGAAATTC 60.179 50.000 5.05 0.00 0.00 2.17
657 658 0.242555 AAAACGCATCGCCGGAAATT 59.757 45.000 5.05 0.00 0.00 1.82
658 659 0.179174 GAAAACGCATCGCCGGAAAT 60.179 50.000 5.05 0.00 0.00 2.17
659 660 1.208103 GAAAACGCATCGCCGGAAA 59.792 52.632 5.05 0.00 0.00 3.13
660 661 1.906994 CTGAAAACGCATCGCCGGAA 61.907 55.000 5.05 0.00 0.00 4.30
661 662 2.357638 TGAAAACGCATCGCCGGA 60.358 55.556 5.05 0.00 0.00 5.14
662 663 2.098298 CTGAAAACGCATCGCCGG 59.902 61.111 0.00 0.00 0.00 6.13
663 664 1.509787 CACTGAAAACGCATCGCCG 60.510 57.895 0.00 0.00 0.00 6.46
664 665 1.154225 CCACTGAAAACGCATCGCC 60.154 57.895 0.00 0.00 0.00 5.54
665 666 1.154225 CCCACTGAAAACGCATCGC 60.154 57.895 0.00 0.00 0.00 4.58
666 667 0.443869 CTCCCACTGAAAACGCATCG 59.556 55.000 0.00 0.00 0.00 3.84
667 668 0.804989 CCTCCCACTGAAAACGCATC 59.195 55.000 0.00 0.00 0.00 3.91
668 669 0.400213 TCCTCCCACTGAAAACGCAT 59.600 50.000 0.00 0.00 0.00 4.73
669 670 0.250295 CTCCTCCCACTGAAAACGCA 60.250 55.000 0.00 0.00 0.00 5.24
670 671 0.034896 TCTCCTCCCACTGAAAACGC 59.965 55.000 0.00 0.00 0.00 4.84
671 672 1.797025 GTCTCCTCCCACTGAAAACG 58.203 55.000 0.00 0.00 0.00 3.60
672 673 1.070289 ACGTCTCCTCCCACTGAAAAC 59.930 52.381 0.00 0.00 0.00 2.43
673 674 1.420430 ACGTCTCCTCCCACTGAAAA 58.580 50.000 0.00 0.00 0.00 2.29
674 675 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
675 676 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
676 677 0.112606 AGAACGTCTCCTCCCACTGA 59.887 55.000 0.00 0.00 0.00 3.41
677 678 0.528470 GAGAACGTCTCCTCCCACTG 59.472 60.000 0.00 0.00 37.55 3.66
678 679 0.961358 CGAGAACGTCTCCTCCCACT 60.961 60.000 8.73 0.00 40.34 4.00
679 680 1.507174 CGAGAACGTCTCCTCCCAC 59.493 63.158 8.73 0.00 40.34 4.61
680 681 3.998156 CGAGAACGTCTCCTCCCA 58.002 61.111 8.73 0.00 40.34 4.37
699 700 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
700 701 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
713 714 4.978186 TGAGATTTACGAAGTCACCGTAG 58.022 43.478 0.00 0.00 43.93 3.51
714 715 5.181811 TCTTGAGATTTACGAAGTCACCGTA 59.818 40.000 0.00 0.00 43.93 4.02
715 716 3.928727 TGAGATTTACGAAGTCACCGT 57.071 42.857 0.00 0.00 43.93 4.83
716 717 4.482386 TCTTGAGATTTACGAAGTCACCG 58.518 43.478 0.00 0.00 43.93 4.94
717 718 6.100004 TCATCTTGAGATTTACGAAGTCACC 58.900 40.000 0.00 0.00 35.39 4.02
718 719 7.763172 ATCATCTTGAGATTTACGAAGTCAC 57.237 36.000 0.00 0.00 35.39 3.67
719 720 9.468532 CATATCATCTTGAGATTTACGAAGTCA 57.531 33.333 0.00 0.00 35.39 3.41
720 721 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
721 722 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
722 723 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
723 724 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
724 725 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
725 726 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
726 727 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
727 728 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
728 729 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
729 730 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
730 731 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
731 732 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
732 733 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
733 734 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
734 735 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
735 736 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
736 737 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
737 738 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
738 739 1.274728 GAGACTGAGCCGGCATATCAT 59.725 52.381 31.54 13.17 0.00 2.45
739 740 0.676184 GAGACTGAGCCGGCATATCA 59.324 55.000 31.54 22.44 0.00 2.15
740 741 0.965439 AGAGACTGAGCCGGCATATC 59.035 55.000 31.54 18.63 0.00 1.63
741 742 0.965439 GAGAGACTGAGCCGGCATAT 59.035 55.000 31.54 8.11 0.00 1.78
742 743 0.395724 TGAGAGACTGAGCCGGCATA 60.396 55.000 31.54 16.21 0.00 3.14
743 744 1.674764 CTGAGAGACTGAGCCGGCAT 61.675 60.000 31.54 14.28 0.00 4.40
744 745 2.283173 TGAGAGACTGAGCCGGCA 60.283 61.111 31.54 7.98 0.00 5.69
745 746 2.003658 CTCTGAGAGACTGAGCCGGC 62.004 65.000 21.89 21.89 37.65 6.13
746 747 0.393673 TCTCTGAGAGACTGAGCCGG 60.394 60.000 8.34 0.00 41.99 6.13
747 748 1.334556 CATCTCTGAGAGACTGAGCCG 59.665 57.143 15.39 0.00 41.76 5.52
748 749 1.067516 GCATCTCTGAGAGACTGAGCC 59.932 57.143 15.39 0.00 41.76 4.70
749 750 2.026641 AGCATCTCTGAGAGACTGAGC 58.973 52.381 15.39 15.59 41.76 4.26
750 751 3.281158 TGAGCATCTCTGAGAGACTGAG 58.719 50.000 15.39 6.51 41.76 3.35
751 752 3.362870 TGAGCATCTCTGAGAGACTGA 57.637 47.619 15.39 0.00 41.76 3.41
752 753 4.364860 CAATGAGCATCTCTGAGAGACTG 58.635 47.826 15.39 14.42 41.76 3.51
753 754 3.385433 CCAATGAGCATCTCTGAGAGACT 59.615 47.826 15.39 8.36 41.76 3.24
754 755 3.493002 CCCAATGAGCATCTCTGAGAGAC 60.493 52.174 15.39 2.95 41.76 3.36
755 756 2.699321 CCCAATGAGCATCTCTGAGAGA 59.301 50.000 15.42 15.42 43.20 3.10
756 757 2.699321 TCCCAATGAGCATCTCTGAGAG 59.301 50.000 13.50 2.28 34.92 3.20
757 758 2.755686 TCCCAATGAGCATCTCTGAGA 58.244 47.619 10.23 10.23 34.92 3.27
758 759 3.773418 ATCCCAATGAGCATCTCTGAG 57.227 47.619 0.00 0.00 34.92 3.35
759 760 3.581770 CCTATCCCAATGAGCATCTCTGA 59.418 47.826 0.00 0.00 34.92 3.27
760 761 3.307550 CCCTATCCCAATGAGCATCTCTG 60.308 52.174 0.00 0.00 34.92 3.35
761 762 2.911636 CCCTATCCCAATGAGCATCTCT 59.088 50.000 0.00 0.00 34.92 3.10
762 763 2.641815 ACCCTATCCCAATGAGCATCTC 59.358 50.000 0.00 0.00 34.92 2.75
763 764 2.374504 CACCCTATCCCAATGAGCATCT 59.625 50.000 0.00 0.00 34.92 2.90
764 765 2.107204 ACACCCTATCCCAATGAGCATC 59.893 50.000 0.00 0.00 0.00 3.91
765 766 2.138542 ACACCCTATCCCAATGAGCAT 58.861 47.619 0.00 0.00 0.00 3.79
766 767 1.212688 CACACCCTATCCCAATGAGCA 59.787 52.381 0.00 0.00 0.00 4.26
767 768 1.972872 CACACCCTATCCCAATGAGC 58.027 55.000 0.00 0.00 0.00 4.26
768 769 1.811558 CGCACACCCTATCCCAATGAG 60.812 57.143 0.00 0.00 0.00 2.90
769 770 0.180171 CGCACACCCTATCCCAATGA 59.820 55.000 0.00 0.00 0.00 2.57
770 771 0.107214 ACGCACACCCTATCCCAATG 60.107 55.000 0.00 0.00 0.00 2.82
771 772 0.107214 CACGCACACCCTATCCCAAT 60.107 55.000 0.00 0.00 0.00 3.16
772 773 1.298340 CACGCACACCCTATCCCAA 59.702 57.895 0.00 0.00 0.00 4.12
773 774 1.916273 ACACGCACACCCTATCCCA 60.916 57.895 0.00 0.00 0.00 4.37
774 775 1.449601 CACACGCACACCCTATCCC 60.450 63.158 0.00 0.00 0.00 3.85
775 776 1.019278 CACACACGCACACCCTATCC 61.019 60.000 0.00 0.00 0.00 2.59
776 777 1.635663 GCACACACGCACACCCTATC 61.636 60.000 0.00 0.00 0.00 2.08
777 778 1.671054 GCACACACGCACACCCTAT 60.671 57.895 0.00 0.00 0.00 2.57
778 779 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
781 782 2.037913 TAAACGCACACACGCACACC 62.038 55.000 0.00 0.00 36.19 4.16
782 783 0.041663 ATAAACGCACACACGCACAC 60.042 50.000 0.00 0.00 36.19 3.82
783 784 1.457683 CTATAAACGCACACACGCACA 59.542 47.619 0.00 0.00 36.19 4.57
784 785 1.201877 CCTATAAACGCACACACGCAC 60.202 52.381 0.00 0.00 36.19 5.34
785 786 1.072391 CCTATAAACGCACACACGCA 58.928 50.000 0.00 0.00 36.19 5.24
786 787 0.372334 CCCTATAAACGCACACACGC 59.628 55.000 0.00 0.00 36.19 5.34
787 788 1.999048 TCCCTATAAACGCACACACG 58.001 50.000 0.00 0.00 39.50 4.49
788 789 3.527533 TCATCCCTATAAACGCACACAC 58.472 45.455 0.00 0.00 0.00 3.82
789 790 3.196901 ACTCATCCCTATAAACGCACACA 59.803 43.478 0.00 0.00 0.00 3.72
790 791 3.555956 CACTCATCCCTATAAACGCACAC 59.444 47.826 0.00 0.00 0.00 3.82
791 792 3.196901 ACACTCATCCCTATAAACGCACA 59.803 43.478 0.00 0.00 0.00 4.57
792 793 3.793559 ACACTCATCCCTATAAACGCAC 58.206 45.455 0.00 0.00 0.00 5.34
793 794 5.538118 CATACACTCATCCCTATAAACGCA 58.462 41.667 0.00 0.00 0.00 5.24
794 795 4.389077 GCATACACTCATCCCTATAAACGC 59.611 45.833 0.00 0.00 0.00 4.84
795 796 4.621460 CGCATACACTCATCCCTATAAACG 59.379 45.833 0.00 0.00 0.00 3.60
796 797 4.389077 GCGCATACACTCATCCCTATAAAC 59.611 45.833 0.30 0.00 0.00 2.01
797 798 4.566004 GCGCATACACTCATCCCTATAAA 58.434 43.478 0.30 0.00 0.00 1.40
798 799 3.366985 CGCGCATACACTCATCCCTATAA 60.367 47.826 8.75 0.00 0.00 0.98
799 800 2.163613 CGCGCATACACTCATCCCTATA 59.836 50.000 8.75 0.00 0.00 1.31
800 801 1.067565 CGCGCATACACTCATCCCTAT 60.068 52.381 8.75 0.00 0.00 2.57
801 802 0.313987 CGCGCATACACTCATCCCTA 59.686 55.000 8.75 0.00 0.00 3.53
802 803 1.068083 CGCGCATACACTCATCCCT 59.932 57.895 8.75 0.00 0.00 4.20
803 804 1.227263 ACGCGCATACACTCATCCC 60.227 57.895 5.73 0.00 0.00 3.85
804 805 0.806102 ACACGCGCATACACTCATCC 60.806 55.000 5.73 0.00 0.00 3.51
805 806 1.835121 TACACGCGCATACACTCATC 58.165 50.000 5.73 0.00 0.00 2.92
806 807 2.509052 ATACACGCGCATACACTCAT 57.491 45.000 5.73 0.00 0.00 2.90
807 808 3.003897 TCATATACACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
808 809 3.561503 TCATATACACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
809 810 3.565516 CTCATATACACGCGCATACACT 58.434 45.455 5.73 0.00 0.00 3.55
810 811 2.090658 GCTCATATACACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
811 812 2.324860 GCTCATATACACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
812 813 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
813 814 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
814 815 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
815 816 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
819 820 2.193447 ACACAAGCGCTCATATACACG 58.807 47.619 12.06 0.00 0.00 4.49
820 821 3.243877 CAGACACAAGCGCTCATATACAC 59.756 47.826 12.06 0.00 0.00 2.90
821 822 3.119137 ACAGACACAAGCGCTCATATACA 60.119 43.478 12.06 0.00 0.00 2.29
822 823 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
823 824 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
824 825 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
825 826 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
826 827 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
827 828 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
828 829 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
829 830 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
830 831 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
831 832 1.391485 GCATCAGTACAGACACAAGCG 59.609 52.381 0.00 0.00 0.00 4.68
832 833 2.693069 AGCATCAGTACAGACACAAGC 58.307 47.619 0.00 0.00 0.00 4.01
833 834 6.785488 TTTTAGCATCAGTACAGACACAAG 57.215 37.500 0.00 0.00 0.00 3.16
855 856 1.362355 CGCCCGCCTCTTTGTTTTT 59.638 52.632 0.00 0.00 0.00 1.94
856 857 0.535553 TACGCCCGCCTCTTTGTTTT 60.536 50.000 0.00 0.00 0.00 2.43
857 858 1.071814 TACGCCCGCCTCTTTGTTT 59.928 52.632 0.00 0.00 0.00 2.83
858 859 1.670083 GTACGCCCGCCTCTTTGTT 60.670 57.895 0.00 0.00 0.00 2.83
859 860 2.047560 GTACGCCCGCCTCTTTGT 60.048 61.111 0.00 0.00 0.00 2.83
860 861 2.901051 ATCGTACGCCCGCCTCTTTG 62.901 60.000 11.24 0.00 0.00 2.77
861 862 1.386525 TATCGTACGCCCGCCTCTTT 61.387 55.000 11.24 0.00 0.00 2.52
862 863 1.177256 ATATCGTACGCCCGCCTCTT 61.177 55.000 11.24 0.00 0.00 2.85
863 864 0.321919 TATATCGTACGCCCGCCTCT 60.322 55.000 11.24 0.00 0.00 3.69
864 865 0.737219 ATATATCGTACGCCCGCCTC 59.263 55.000 11.24 0.00 0.00 4.70
865 866 1.180029 AATATATCGTACGCCCGCCT 58.820 50.000 11.24 0.00 0.00 5.52
866 867 1.657094 CAAATATATCGTACGCCCGCC 59.343 52.381 11.24 0.00 0.00 6.13
867 868 1.060122 GCAAATATATCGTACGCCCGC 59.940 52.381 11.24 0.67 0.00 6.13
868 869 2.344441 CAGCAAATATATCGTACGCCCG 59.656 50.000 11.24 0.00 0.00 6.13
869 870 3.581755 TCAGCAAATATATCGTACGCCC 58.418 45.455 11.24 0.00 0.00 6.13
870 871 5.585500 TTTCAGCAAATATATCGTACGCC 57.415 39.130 11.24 0.00 0.00 5.68
871 872 6.902948 TGTTTTTCAGCAAATATATCGTACGC 59.097 34.615 11.24 0.00 0.00 4.42
872 873 8.814733 TTGTTTTTCAGCAAATATATCGTACG 57.185 30.769 9.53 9.53 0.00 3.67
873 874 9.982291 TCTTGTTTTTCAGCAAATATATCGTAC 57.018 29.630 0.00 0.00 0.00 3.67
875 876 9.906660 TTTCTTGTTTTTCAGCAAATATATCGT 57.093 25.926 0.00 0.00 0.00 3.73
878 879 9.154847 GCCTTTCTTGTTTTTCAGCAAATATAT 57.845 29.630 0.00 0.00 0.00 0.86
879 880 7.328249 CGCCTTTCTTGTTTTTCAGCAAATATA 59.672 33.333 0.00 0.00 0.00 0.86
880 881 6.146021 CGCCTTTCTTGTTTTTCAGCAAATAT 59.854 34.615 0.00 0.00 0.00 1.28
881 882 5.461737 CGCCTTTCTTGTTTTTCAGCAAATA 59.538 36.000 0.00 0.00 0.00 1.40
882 883 4.270808 CGCCTTTCTTGTTTTTCAGCAAAT 59.729 37.500 0.00 0.00 0.00 2.32
883 884 3.616379 CGCCTTTCTTGTTTTTCAGCAAA 59.384 39.130 0.00 0.00 0.00 3.68
884 885 3.119316 TCGCCTTTCTTGTTTTTCAGCAA 60.119 39.130 0.00 0.00 0.00 3.91
885 886 2.425312 TCGCCTTTCTTGTTTTTCAGCA 59.575 40.909 0.00 0.00 0.00 4.41
886 887 3.045688 CTCGCCTTTCTTGTTTTTCAGC 58.954 45.455 0.00 0.00 0.00 4.26
887 888 3.045688 GCTCGCCTTTCTTGTTTTTCAG 58.954 45.455 0.00 0.00 0.00 3.02
888 889 2.540769 CGCTCGCCTTTCTTGTTTTTCA 60.541 45.455 0.00 0.00 0.00 2.69
889 890 2.044135 CGCTCGCCTTTCTTGTTTTTC 58.956 47.619 0.00 0.00 0.00 2.29
890 891 1.404035 ACGCTCGCCTTTCTTGTTTTT 59.596 42.857 0.00 0.00 0.00 1.94
891 892 1.021968 ACGCTCGCCTTTCTTGTTTT 58.978 45.000 0.00 0.00 0.00 2.43
892 893 1.529865 GTACGCTCGCCTTTCTTGTTT 59.470 47.619 0.00 0.00 0.00 2.83
893 894 1.145803 GTACGCTCGCCTTTCTTGTT 58.854 50.000 0.00 0.00 0.00 2.83
894 895 1.007336 CGTACGCTCGCCTTTCTTGT 61.007 55.000 0.52 0.00 0.00 3.16
895 896 1.683790 CCGTACGCTCGCCTTTCTTG 61.684 60.000 10.49 0.00 0.00 3.02
896 897 1.445582 CCGTACGCTCGCCTTTCTT 60.446 57.895 10.49 0.00 0.00 2.52
897 898 1.308069 TACCGTACGCTCGCCTTTCT 61.308 55.000 10.49 0.00 0.00 2.52
898 899 0.248784 ATACCGTACGCTCGCCTTTC 60.249 55.000 10.49 0.00 0.00 2.62
899 900 1.024271 TATACCGTACGCTCGCCTTT 58.976 50.000 10.49 0.00 0.00 3.11
900 901 1.024271 TTATACCGTACGCTCGCCTT 58.976 50.000 10.49 0.00 0.00 4.35
901 902 0.308993 GTTATACCGTACGCTCGCCT 59.691 55.000 10.49 0.00 0.00 5.52
902 903 0.308993 AGTTATACCGTACGCTCGCC 59.691 55.000 10.49 0.00 0.00 5.54
903 904 1.668043 GAGTTATACCGTACGCTCGC 58.332 55.000 10.49 0.00 0.00 5.03
904 905 1.929569 CGAGTTATACCGTACGCTCG 58.070 55.000 20.53 20.53 39.50 5.03
905 906 1.661460 GGCGAGTTATACCGTACGCTC 60.661 57.143 10.49 8.90 44.31 5.03
906 907 0.308993 GGCGAGTTATACCGTACGCT 59.691 55.000 10.49 0.00 44.31 5.07
907 908 0.029300 TGGCGAGTTATACCGTACGC 59.971 55.000 10.49 0.00 44.18 4.42
908 909 2.693797 ATGGCGAGTTATACCGTACG 57.306 50.000 8.69 8.69 0.00 3.67
909 910 3.671702 GCCTATGGCGAGTTATACCGTAC 60.672 52.174 0.00 0.00 39.62 3.67
910 911 2.489329 GCCTATGGCGAGTTATACCGTA 59.511 50.000 0.00 0.00 39.62 4.02
911 912 1.271656 GCCTATGGCGAGTTATACCGT 59.728 52.381 0.00 0.00 39.62 4.83
912 913 1.992170 GCCTATGGCGAGTTATACCG 58.008 55.000 0.00 0.00 39.62 4.02
923 924 2.683867 ACGTCTATATCTCGCCTATGGC 59.316 50.000 0.00 0.00 46.75 4.40
924 925 3.001431 CGACGTCTATATCTCGCCTATGG 59.999 52.174 14.70 0.00 0.00 2.74
925 926 3.544440 GCGACGTCTATATCTCGCCTATG 60.544 52.174 14.70 0.00 44.53 2.23
926 927 2.608546 GCGACGTCTATATCTCGCCTAT 59.391 50.000 14.70 0.00 44.53 2.57
927 928 1.998315 GCGACGTCTATATCTCGCCTA 59.002 52.381 14.70 0.00 44.53 3.93
928 929 0.797542 GCGACGTCTATATCTCGCCT 59.202 55.000 14.70 0.00 44.53 5.52
929 930 0.518764 CGCGACGTCTATATCTCGCC 60.519 60.000 14.70 0.00 46.93 5.54
930 931 0.437678 TCGCGACGTCTATATCTCGC 59.562 55.000 14.70 8.95 46.31 5.03
931 932 1.454653 TGTCGCGACGTCTATATCTCG 59.545 52.381 31.88 0.00 0.00 4.04
932 933 3.661819 GATGTCGCGACGTCTATATCTC 58.338 50.000 40.50 21.46 42.51 2.75
933 934 2.092368 CGATGTCGCGACGTCTATATCT 59.908 50.000 42.00 18.25 43.36 1.98
934 935 2.091744 TCGATGTCGCGACGTCTATATC 59.908 50.000 42.00 31.05 43.36 1.63
935 936 2.064014 TCGATGTCGCGACGTCTATAT 58.936 47.619 42.00 27.41 43.36 0.86
936 937 1.490621 TCGATGTCGCGACGTCTATA 58.509 50.000 42.00 30.24 43.36 1.31
937 938 0.654160 TTCGATGTCGCGACGTCTAT 59.346 50.000 42.00 28.36 43.36 1.98
938 939 0.247419 GTTCGATGTCGCGACGTCTA 60.247 55.000 42.00 34.80 43.36 2.59
939 940 1.511464 GTTCGATGTCGCGACGTCT 60.511 57.895 42.00 27.67 43.36 4.18
940 941 1.132199 ATGTTCGATGTCGCGACGTC 61.132 55.000 39.10 39.10 40.42 4.34
941 942 1.132199 GATGTTCGATGTCGCGACGT 61.132 55.000 32.66 32.66 40.42 4.34
942 943 1.131618 TGATGTTCGATGTCGCGACG 61.132 55.000 31.88 21.61 40.42 5.12
943 944 0.989164 TTGATGTTCGATGTCGCGAC 59.011 50.000 31.66 31.66 40.42 5.19
944 945 1.268265 CTTGATGTTCGATGTCGCGA 58.732 50.000 3.71 3.71 39.60 5.87
945 946 0.314578 GCTTGATGTTCGATGTCGCG 60.315 55.000 0.00 0.00 39.60 5.87
946 947 0.026803 GGCTTGATGTTCGATGTCGC 59.973 55.000 0.00 0.00 39.60 5.19
947 948 1.645034 AGGCTTGATGTTCGATGTCG 58.355 50.000 0.00 0.00 41.45 4.35
948 949 4.046938 TCTAGGCTTGATGTTCGATGTC 57.953 45.455 0.00 0.00 0.00 3.06
949 950 4.343526 AGATCTAGGCTTGATGTTCGATGT 59.656 41.667 16.10 0.00 0.00 3.06
950 951 4.880759 AGATCTAGGCTTGATGTTCGATG 58.119 43.478 16.10 0.00 0.00 3.84
951 952 6.127479 GGATAGATCTAGGCTTGATGTTCGAT 60.127 42.308 16.10 4.98 0.00 3.59
952 953 5.184096 GGATAGATCTAGGCTTGATGTTCGA 59.816 44.000 16.10 0.18 0.00 3.71
953 954 5.406649 GGATAGATCTAGGCTTGATGTTCG 58.593 45.833 16.10 0.00 0.00 3.95
954 955 5.337975 GGGGATAGATCTAGGCTTGATGTTC 60.338 48.000 16.10 11.35 0.00 3.18
955 956 4.534103 GGGGATAGATCTAGGCTTGATGTT 59.466 45.833 16.10 6.93 0.00 2.71
956 957 4.100373 GGGGATAGATCTAGGCTTGATGT 58.900 47.826 16.10 14.25 0.00 3.06
957 958 3.454082 GGGGGATAGATCTAGGCTTGATG 59.546 52.174 16.10 0.00 0.00 3.07
958 959 3.730269 GGGGGATAGATCTAGGCTTGAT 58.270 50.000 11.26 11.26 0.00 2.57
959 960 2.557676 CGGGGGATAGATCTAGGCTTGA 60.558 54.545 8.70 0.14 0.00 3.02
963 964 1.331399 GGCGGGGGATAGATCTAGGC 61.331 65.000 8.70 2.12 0.00 3.93
1296 1305 7.495934 CCAAGATGTGTAAAGAATACGGAGATT 59.504 37.037 0.00 0.00 0.00 2.40
1302 1311 7.095397 TGACAACCAAGATGTGTAAAGAATACG 60.095 37.037 0.00 0.00 0.00 3.06
1412 1421 1.672356 CAGAGCCCACAGGGTTTCG 60.672 63.158 3.68 0.00 46.45 3.46
1742 1751 1.213430 ACCCAACCGTTTCTTCAGGAA 59.787 47.619 0.00 0.00 0.00 3.36
1743 1752 0.841289 ACCCAACCGTTTCTTCAGGA 59.159 50.000 0.00 0.00 0.00 3.86
1760 1769 8.258007 TGATTAGATATGGATGAATTCCGTACC 58.742 37.037 2.27 2.08 46.52 3.34
1761 1770 9.653287 TTGATTAGATATGGATGAATTCCGTAC 57.347 33.333 2.27 0.00 46.52 3.67
1806 1815 7.658525 TGGCAAATTACATCAATAATGTCCT 57.341 32.000 0.00 0.00 45.78 3.85
1818 1827 6.518493 CATCCAAATAGCTGGCAAATTACAT 58.482 36.000 0.00 0.00 36.32 2.29
1825 1834 1.849977 TGCATCCAAATAGCTGGCAA 58.150 45.000 0.00 0.00 36.32 4.52
1833 1842 5.104859 AGCACATTTCCATTGCATCCAAATA 60.105 36.000 0.00 0.00 38.81 1.40
1878 1890 2.435586 CAGCTGCTCGGGGTTCAG 60.436 66.667 0.00 0.00 0.00 3.02
1988 2023 3.411446 CATAGTGTGGAAGAAACCAGCA 58.589 45.455 0.00 0.00 40.85 4.41
2011 2077 2.588925 AGGGGTGCCTTCCTTAGTAT 57.411 50.000 0.00 0.00 0.00 2.12
2046 2113 5.241949 CGACAACATCTAGCTCTATAAGGGT 59.758 44.000 0.00 0.00 0.00 4.34
2072 2139 4.340617 TGTTTGGAAAACAGTGGAGAAGT 58.659 39.130 1.52 0.00 0.00 3.01
2098 2577 0.108585 ACAGCAACCTCGACCAACAT 59.891 50.000 0.00 0.00 0.00 2.71
2180 2660 2.028476 CACATGACTAGGACCCGAAACA 60.028 50.000 0.00 0.00 0.00 2.83
2228 2722 1.925255 ACCACACATCCCATCTCCATT 59.075 47.619 0.00 0.00 0.00 3.16
2277 2771 1.406614 GGACGACTAGAGAAGGACGGA 60.407 57.143 0.00 0.00 34.82 4.69
2315 2812 8.138712 CACAATAGATCTAAGGGAACTACAGTC 58.861 40.741 6.52 0.00 42.68 3.51
2466 3013 2.158559 CCACGACAAATGACCAATGGA 58.841 47.619 6.16 0.00 0.00 3.41
2470 3017 1.222300 CGACCACGACAAATGACCAA 58.778 50.000 0.00 0.00 42.66 3.67
2524 3071 2.212900 GAAAGCGTGAACCATGGGGC 62.213 60.000 18.09 10.96 37.90 5.80
2685 3232 5.121811 AGTTGGCATAAGAGTGATAAGCAG 58.878 41.667 0.00 0.00 0.00 4.24
2714 3261 3.053291 GTCCATTTGCGTCGGCCA 61.053 61.111 2.24 0.00 38.85 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.