Multiple sequence alignment - TraesCS5A01G074600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G074600 chr5A 100.000 5665 0 0 1 5665 87936354 87930690 0.000000e+00 10462.0
1 TraesCS5A01G074600 chr5A 98.018 908 6 4 1 899 50556394 50555490 0.000000e+00 1567.0
2 TraesCS5A01G074600 chr5A 96.487 911 18 6 1 899 33754295 33753387 0.000000e+00 1493.0
3 TraesCS5A01G074600 chr5A 81.007 437 71 9 2720 3150 87933542 87933112 2.530000e-88 337.0
4 TraesCS5A01G074600 chr5A 81.007 437 71 9 2813 3243 87933635 87933205 2.530000e-88 337.0
5 TraesCS5A01G074600 chr5B 94.129 2606 120 13 1877 4463 101324787 101322196 0.000000e+00 3934.0
6 TraesCS5A01G074600 chr5B 91.543 875 45 14 889 1744 101325652 101324788 0.000000e+00 1179.0
7 TraesCS5A01G074600 chr5B 93.460 367 12 3 4516 4870 101322199 101321833 8.350000e-148 534.0
8 TraesCS5A01G074600 chr5B 79.596 446 71 8 2720 3150 101323846 101323406 9.220000e-78 302.0
9 TraesCS5A01G074600 chr5B 88.073 218 22 3 5136 5350 101321698 101321482 7.280000e-64 255.0
10 TraesCS5A01G074600 chr5B 79.630 216 16 13 5353 5568 101321153 101320966 4.610000e-26 130.0
11 TraesCS5A01G074600 chr5B 76.518 247 43 12 2998 3238 101323939 101323702 2.770000e-23 121.0
12 TraesCS5A01G074600 chr5B 90.909 44 4 0 502 545 617173100 617173057 6.130000e-05 60.2
13 TraesCS5A01G074600 chr5D 93.866 1989 84 16 2904 4865 94027070 94025093 0.000000e+00 2963.0
14 TraesCS5A01G074600 chr5D 92.882 857 43 4 899 1744 94028902 94028053 0.000000e+00 1229.0
15 TraesCS5A01G074600 chr5D 89.037 976 90 16 2089 3054 94027699 94026731 0.000000e+00 1194.0
16 TraesCS5A01G074600 chr5D 95.000 220 10 1 1872 2090 94028059 94027840 1.510000e-90 344.0
17 TraesCS5A01G074600 chr5D 83.260 227 29 7 5136 5356 94024651 94024428 3.460000e-47 200.0
18 TraesCS5A01G074600 chr5D 96.581 117 4 0 1756 1872 474212314 474212430 1.610000e-45 195.0
19 TraesCS5A01G074600 chr5D 95.283 106 5 0 5020 5125 94024739 94024634 9.760000e-38 169.0
20 TraesCS5A01G074600 chr4A 78.547 881 147 28 2208 3053 684506749 684505876 4.990000e-150 542.0
21 TraesCS5A01G074600 chr4A 74.266 886 176 30 2425 3306 684516813 684515976 5.470000e-85 326.0
22 TraesCS5A01G074600 chr4A 78.819 491 75 18 3601 4085 684515806 684515339 2.560000e-78 303.0
23 TraesCS5A01G074600 chr4A 95.798 119 5 0 4866 4984 1725516 1725398 5.790000e-45 193.0
24 TraesCS5A01G074600 chr4A 96.552 116 4 0 4862 4977 550136380 550136495 5.790000e-45 193.0
25 TraesCS5A01G074600 chr4A 91.000 100 9 0 2265 2364 684434238 684434139 9.900000e-28 135.0
26 TraesCS5A01G074600 chr4A 83.824 136 19 3 1381 1514 684509323 684509189 5.960000e-25 126.0
27 TraesCS5A01G074600 chr4A 83.544 79 13 0 5485 5563 475424911 475424833 2.190000e-09 75.0
28 TraesCS5A01G074600 chr4A 92.105 38 3 0 1734 1771 668742175 668742138 3.000000e-03 54.7
29 TraesCS5A01G074600 chr4B 77.671 936 160 32 2219 3120 603169118 603168198 5.030000e-145 525.0
30 TraesCS5A01G074600 chr4B 80.928 194 29 5 1330 1516 603169882 603169690 4.570000e-31 147.0
31 TraesCS5A01G074600 chr4B 90.000 100 10 0 2265 2364 602784128 602784029 4.610000e-26 130.0
32 TraesCS5A01G074600 chr4D 76.774 930 153 37 2219 3120 477582643 477581749 4.000000e-126 462.0
33 TraesCS5A01G074600 chr4D 94.355 124 6 1 1756 1878 432432814 432432937 7.490000e-44 189.0
34 TraesCS5A01G074600 chr4D 95.726 117 4 1 4862 4978 60634347 60634462 2.690000e-43 187.0
35 TraesCS5A01G074600 chr4D 77.536 276 38 15 2111 2366 477629147 477628876 1.640000e-30 145.0
36 TraesCS5A01G074600 chr4D 81.461 178 28 4 1330 1503 477585221 477585045 2.130000e-29 141.0
37 TraesCS5A01G074600 chr4D 78.112 233 40 8 3048 3273 477628284 477628056 2.750000e-28 137.0
38 TraesCS5A01G074600 chrUn 95.312 128 6 0 1745 1872 264592 264719 2.680000e-48 204.0
39 TraesCS5A01G074600 chrUn 97.345 113 3 0 4868 4980 150796058 150795946 5.790000e-45 193.0
40 TraesCS5A01G074600 chrUn 79.259 135 15 6 5437 5559 28634172 28634039 1.310000e-11 82.4
41 TraesCS5A01G074600 chr1D 95.312 128 5 1 1745 1872 456283777 456283903 9.620000e-48 202.0
42 TraesCS5A01G074600 chr1D 93.893 131 6 1 1747 1875 413308566 413308436 4.480000e-46 196.0
43 TraesCS5A01G074600 chr1D 79.524 210 29 9 5177 5375 470921093 470921299 2.750000e-28 137.0
44 TraesCS5A01G074600 chr1D 88.235 51 4 2 1235 1284 200880080 200880031 6.130000e-05 60.2
45 TraesCS5A01G074600 chr3D 94.444 126 7 0 1744 1869 610738644 610738769 1.610000e-45 195.0
46 TraesCS5A01G074600 chr3D 81.768 181 31 2 2414 2593 466281714 466281893 3.540000e-32 150.0
47 TraesCS5A01G074600 chr2D 97.368 114 3 0 4862 4975 13492454 13492567 1.610000e-45 195.0
48 TraesCS5A01G074600 chr2D 83.333 90 12 2 5486 5572 516923269 516923180 4.700000e-11 80.5
49 TraesCS5A01G074600 chr2D 81.720 93 12 5 5486 5575 422801697 422801607 7.870000e-09 73.1
50 TraesCS5A01G074600 chr2D 93.750 48 2 1 5171 5218 617971431 617971477 2.830000e-08 71.3
51 TraesCS5A01G074600 chr6B 96.581 117 3 1 4866 4982 156651549 156651434 5.790000e-45 193.0
52 TraesCS5A01G074600 chr6B 95.726 117 5 0 4865 4981 218024960 218024844 7.490000e-44 189.0
53 TraesCS5A01G074600 chr6B 92.366 131 6 1 1744 1870 654135501 654135631 3.490000e-42 183.0
54 TraesCS5A01G074600 chr3B 93.798 129 7 1 1744 1872 631951391 631951264 5.790000e-45 193.0
55 TraesCS5A01G074600 chr3B 95.798 119 4 1 1756 1873 491374841 491374959 2.080000e-44 191.0
56 TraesCS5A01G074600 chr3B 84.564 149 21 2 2423 2570 620183766 620183913 4.570000e-31 147.0
57 TraesCS5A01G074600 chr2A 95.763 118 5 0 4859 4976 79319269 79319152 2.080000e-44 191.0
58 TraesCS5A01G074600 chr2A 78.804 184 26 7 5397 5568 587147860 587147678 1.670000e-20 111.0
59 TraesCS5A01G074600 chr1A 93.651 126 7 1 4852 4976 113434102 113433977 2.690000e-43 187.0
60 TraesCS5A01G074600 chr1A 88.235 51 4 2 1235 1284 254386331 254386282 6.130000e-05 60.2
61 TraesCS5A01G074600 chr3A 81.818 187 32 2 2405 2590 609474815 609475000 7.600000e-34 156.0
62 TraesCS5A01G074600 chr7A 76.471 204 39 6 687 887 727273650 727273847 1.000000e-17 102.0
63 TraesCS5A01G074600 chr7A 76.471 204 39 6 687 887 727298903 727299100 1.000000e-17 102.0
64 TraesCS5A01G074600 chr7A 88.000 50 5 1 5285 5333 662647540 662647589 2.200000e-04 58.4
65 TraesCS5A01G074600 chr7D 81.197 117 20 2 5486 5601 94741791 94741906 6.040000e-15 93.5
66 TraesCS5A01G074600 chr2B 89.333 75 6 2 5486 5559 561261734 561261661 6.040000e-15 93.5
67 TraesCS5A01G074600 chr6D 84.091 88 10 4 5486 5572 432731149 432731065 1.310000e-11 82.4
68 TraesCS5A01G074600 chr1B 84.524 84 10 3 5485 5566 38321572 38321654 4.700000e-11 80.5
69 TraesCS5A01G074600 chr1B 88.235 51 4 2 1235 1284 288811409 288811360 6.130000e-05 60.2
70 TraesCS5A01G074600 chr7B 97.059 34 1 0 5309 5342 44544863 44544830 2.200000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G074600 chr5A 87930690 87936354 5664 True 3712.000000 10462 87.338000 1 5665 3 chr5A.!!$R3 5664
1 TraesCS5A01G074600 chr5A 50555490 50556394 904 True 1567.000000 1567 98.018000 1 899 1 chr5A.!!$R2 898
2 TraesCS5A01G074600 chr5A 33753387 33754295 908 True 1493.000000 1493 96.487000 1 899 1 chr5A.!!$R1 898
3 TraesCS5A01G074600 chr5B 101320966 101325652 4686 True 922.142857 3934 86.135571 889 5568 7 chr5B.!!$R2 4679
4 TraesCS5A01G074600 chr5D 94024428 94028902 4474 True 1016.500000 2963 91.554667 899 5356 6 chr5D.!!$R1 4457
5 TraesCS5A01G074600 chr4A 684505876 684509323 3447 True 334.000000 542 81.185500 1381 3053 2 chr4A.!!$R5 1672
6 TraesCS5A01G074600 chr4A 684515339 684516813 1474 True 314.500000 326 76.542500 2425 4085 2 chr4A.!!$R6 1660
7 TraesCS5A01G074600 chr4B 603168198 603169882 1684 True 336.000000 525 79.299500 1330 3120 2 chr4B.!!$R2 1790
8 TraesCS5A01G074600 chr4D 477581749 477585221 3472 True 301.500000 462 79.117500 1330 3120 2 chr4D.!!$R1 1790

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
895 909 0.107831 TGAGCAGGTAAACAACGGCT 59.892 50.0 0.00 0.0 40.76 5.52 F
1218 1238 0.041833 TAGAGCTCTTCCTGCCCAGT 59.958 55.0 23.84 0.0 0.00 4.00 F
2759 6376 0.038744 ACCAAGAGCATTCCCTGTGG 59.961 55.0 0.00 0.0 0.00 4.17 F
3698 7479 0.183492 TGACAAAACAGGCCAGAGCT 59.817 50.0 5.01 0.0 39.73 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1835 5196 0.042448 GCTACGAAAAATAGCGGCGG 60.042 55.000 9.78 0.0 36.02 6.13 R
2939 6557 0.601311 ACCTTCAGCTCTTGTCGCAC 60.601 55.000 0.00 0.0 0.00 5.34 R
4086 7889 1.275291 GAACGGAGACCCAGATTGACA 59.725 52.381 0.00 0.0 0.00 3.58 R
5630 10081 0.030908 GATGCGAAGGAGTAGGACCG 59.969 60.000 0.00 0.0 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 80 2.107204 AGTTTCTGCATGTGGAAGGTCT 59.893 45.455 0.00 0.00 0.00 3.85
895 909 0.107831 TGAGCAGGTAAACAACGGCT 59.892 50.000 0.00 0.00 40.76 5.52
896 910 1.345089 TGAGCAGGTAAACAACGGCTA 59.655 47.619 0.00 0.00 38.91 3.93
897 911 2.000447 GAGCAGGTAAACAACGGCTAG 59.000 52.381 0.00 0.00 38.91 3.42
944 958 1.594862 GCGAGGATCACCAAAATCTCG 59.405 52.381 8.74 8.74 38.94 4.04
991 1005 4.097863 GCCGCGCTAAAAGCCGTT 62.098 61.111 5.56 0.00 38.18 4.44
1064 1084 2.594303 CGGTGAAAGCCACTGCCA 60.594 61.111 0.00 0.00 44.36 4.92
1127 1147 1.148498 GATGGGGTTCCGGATCCAC 59.852 63.158 28.64 26.76 35.24 4.02
1218 1238 0.041833 TAGAGCTCTTCCTGCCCAGT 59.958 55.000 23.84 0.00 0.00 4.00
1237 1257 1.399744 TATCCTGCGTGCGGAAGGAT 61.400 55.000 18.40 18.40 41.65 3.24
1354 1374 3.437795 GAAGGGCGAGTCGGACGA 61.438 66.667 15.52 0.00 0.00 4.20
1421 1444 4.431131 CCTGATGGGGCGGTTGCT 62.431 66.667 0.00 0.00 42.25 3.91
1429 1452 3.977244 GGCGGTTGCTGTTGTGGG 61.977 66.667 0.00 0.00 42.25 4.61
1432 1455 2.892334 CGGTTGCTGTTGTGGGACG 61.892 63.158 0.00 0.00 0.00 4.79
1524 1571 7.901874 TTTTGTTTCTAACGTTATGAACTGC 57.098 32.000 23.17 15.09 0.00 4.40
1532 4874 0.248621 GTTATGAACTGCGGGCATGC 60.249 55.000 9.90 9.90 0.00 4.06
1545 4887 1.334059 GGGCATGCGTATGTGATTTCG 60.334 52.381 15.13 0.00 36.65 3.46
1548 4890 2.348872 GCATGCGTATGTGATTTCGGAG 60.349 50.000 15.13 0.00 36.65 4.63
1570 4912 1.798223 CGACTTGCGAAGGTGATTCAA 59.202 47.619 0.00 0.00 44.57 2.69
1571 4913 2.223144 CGACTTGCGAAGGTGATTCAAA 59.777 45.455 0.00 0.00 44.57 2.69
1572 4914 3.120199 CGACTTGCGAAGGTGATTCAAAT 60.120 43.478 0.00 0.00 44.57 2.32
1573 4915 4.613622 CGACTTGCGAAGGTGATTCAAATT 60.614 41.667 0.00 0.00 44.57 1.82
1618 4979 9.988350 ACAGAAATGTATTTGTATGAAATCGAC 57.012 29.630 0.00 0.00 0.00 4.20
1713 5074 6.426980 TCAGATAATGTGCAAGCTGTTAAG 57.573 37.500 1.65 0.00 0.00 1.85
1721 5082 2.424601 TGCAAGCTGTTAAGGATGCATC 59.575 45.455 18.81 18.81 38.73 3.91
1744 5105 5.874810 TCATTCAACTTGTAGCATAGTGTCC 59.125 40.000 0.00 0.00 0.00 4.02
1745 5106 4.882842 TCAACTTGTAGCATAGTGTCCA 57.117 40.909 0.00 0.00 0.00 4.02
1746 5107 5.420725 TCAACTTGTAGCATAGTGTCCAT 57.579 39.130 0.00 0.00 0.00 3.41
1747 5108 6.538945 TCAACTTGTAGCATAGTGTCCATA 57.461 37.500 0.00 0.00 0.00 2.74
1748 5109 6.573434 TCAACTTGTAGCATAGTGTCCATAG 58.427 40.000 0.00 0.00 0.00 2.23
1749 5110 6.154534 TCAACTTGTAGCATAGTGTCCATAGT 59.845 38.462 0.00 0.00 0.00 2.12
1750 5111 6.546428 ACTTGTAGCATAGTGTCCATAGTT 57.454 37.500 0.00 0.00 0.00 2.24
1751 5112 6.947464 ACTTGTAGCATAGTGTCCATAGTTT 58.053 36.000 0.00 0.00 0.00 2.66
1752 5113 7.394816 ACTTGTAGCATAGTGTCCATAGTTTT 58.605 34.615 0.00 0.00 0.00 2.43
1753 5114 8.537016 ACTTGTAGCATAGTGTCCATAGTTTTA 58.463 33.333 0.00 0.00 0.00 1.52
1754 5115 9.378551 CTTGTAGCATAGTGTCCATAGTTTTAA 57.621 33.333 0.00 0.00 0.00 1.52
1755 5116 9.727859 TTGTAGCATAGTGTCCATAGTTTTAAA 57.272 29.630 0.00 0.00 0.00 1.52
1756 5117 9.899661 TGTAGCATAGTGTCCATAGTTTTAAAT 57.100 29.630 0.00 0.00 0.00 1.40
1759 5120 9.057089 AGCATAGTGTCCATAGTTTTAAATAGC 57.943 33.333 0.00 0.00 0.00 2.97
1760 5121 8.290325 GCATAGTGTCCATAGTTTTAAATAGCC 58.710 37.037 0.00 0.00 0.00 3.93
1761 5122 6.920569 AGTGTCCATAGTTTTAAATAGCCG 57.079 37.500 0.00 0.00 0.00 5.52
1762 5123 5.820947 AGTGTCCATAGTTTTAAATAGCCGG 59.179 40.000 0.00 0.00 0.00 6.13
1763 5124 4.577283 TGTCCATAGTTTTAAATAGCCGGC 59.423 41.667 21.89 21.89 0.00 6.13
1764 5125 4.820173 GTCCATAGTTTTAAATAGCCGGCT 59.180 41.667 34.85 34.85 0.00 5.52
1765 5126 5.993441 GTCCATAGTTTTAAATAGCCGGCTA 59.007 40.000 36.88 36.88 0.00 3.93
1766 5127 6.653740 GTCCATAGTTTTAAATAGCCGGCTAT 59.346 38.462 37.79 37.79 40.63 2.97
1767 5128 7.820872 GTCCATAGTTTTAAATAGCCGGCTATA 59.179 37.037 41.53 28.18 38.20 1.31
1768 5129 8.038944 TCCATAGTTTTAAATAGCCGGCTATAG 58.961 37.037 41.53 22.20 38.20 1.31
1769 5130 7.201617 CCATAGTTTTAAATAGCCGGCTATAGC 60.202 40.741 41.53 29.09 38.20 2.97
1782 5143 2.225467 GCTATAGCCTTTTCAGCAGGG 58.775 52.381 14.13 0.00 34.31 4.45
1783 5144 2.422093 GCTATAGCCTTTTCAGCAGGGT 60.422 50.000 14.13 0.00 44.56 4.34
1784 5145 2.134789 ATAGCCTTTTCAGCAGGGTG 57.865 50.000 2.17 0.00 42.32 4.61
1785 5146 0.609131 TAGCCTTTTCAGCAGGGTGC 60.609 55.000 2.17 0.00 42.32 5.01
1786 5147 2.935740 GCCTTTTCAGCAGGGTGCC 61.936 63.158 0.00 0.00 46.52 5.01
1787 5148 2.629656 CCTTTTCAGCAGGGTGCCG 61.630 63.158 0.00 0.00 46.52 5.69
1788 5149 3.273080 CTTTTCAGCAGGGTGCCGC 62.273 63.158 0.00 0.00 46.52 6.53
1789 5150 3.790416 TTTTCAGCAGGGTGCCGCT 62.790 57.895 0.00 0.00 46.52 5.52
1790 5151 2.404566 TTTTCAGCAGGGTGCCGCTA 62.405 55.000 0.00 0.00 46.52 4.26
1791 5152 2.404566 TTTCAGCAGGGTGCCGCTAA 62.405 55.000 0.00 0.00 46.52 3.09
1792 5153 2.359850 CAGCAGGGTGCCGCTAAA 60.360 61.111 0.00 0.00 46.52 1.85
1793 5154 1.750399 CAGCAGGGTGCCGCTAAAT 60.750 57.895 0.00 0.00 46.52 1.40
1794 5155 1.750399 AGCAGGGTGCCGCTAAATG 60.750 57.895 0.00 0.00 46.52 2.32
1795 5156 2.774799 GCAGGGTGCCGCTAAATGG 61.775 63.158 0.00 0.00 37.42 3.16
1796 5157 1.378514 CAGGGTGCCGCTAAATGGT 60.379 57.895 0.00 0.00 0.00 3.55
1797 5158 1.077716 AGGGTGCCGCTAAATGGTC 60.078 57.895 0.00 0.00 0.00 4.02
1798 5159 2.469516 GGGTGCCGCTAAATGGTCG 61.470 63.158 0.00 0.00 0.00 4.79
1799 5160 2.403586 GTGCCGCTAAATGGTCGC 59.596 61.111 0.00 0.00 0.00 5.19
1800 5161 2.822255 TGCCGCTAAATGGTCGCC 60.822 61.111 0.00 0.00 0.00 5.54
1801 5162 2.513897 GCCGCTAAATGGTCGCCT 60.514 61.111 0.00 0.00 0.00 5.52
1802 5163 2.112815 GCCGCTAAATGGTCGCCTT 61.113 57.895 0.00 0.00 0.00 4.35
1803 5164 2.014594 CCGCTAAATGGTCGCCTTC 58.985 57.895 0.00 0.00 0.00 3.46
1804 5165 0.742990 CCGCTAAATGGTCGCCTTCA 60.743 55.000 0.00 0.00 0.00 3.02
1805 5166 0.373716 CGCTAAATGGTCGCCTTCAC 59.626 55.000 0.00 0.00 0.00 3.18
1806 5167 1.448985 GCTAAATGGTCGCCTTCACA 58.551 50.000 0.00 0.00 0.00 3.58
1807 5168 1.810151 GCTAAATGGTCGCCTTCACAA 59.190 47.619 0.00 0.00 0.00 3.33
1808 5169 2.227865 GCTAAATGGTCGCCTTCACAAA 59.772 45.455 0.00 0.00 0.00 2.83
1809 5170 3.119495 GCTAAATGGTCGCCTTCACAAAT 60.119 43.478 0.00 0.00 0.00 2.32
1810 5171 4.095782 GCTAAATGGTCGCCTTCACAAATA 59.904 41.667 0.00 0.00 0.00 1.40
1811 5172 4.701956 AAATGGTCGCCTTCACAAATAG 57.298 40.909 0.00 0.00 0.00 1.73
1812 5173 1.448985 TGGTCGCCTTCACAAATAGC 58.551 50.000 0.00 0.00 0.00 2.97
1813 5174 0.733150 GGTCGCCTTCACAAATAGCC 59.267 55.000 0.00 0.00 0.00 3.93
1814 5175 0.733150 GTCGCCTTCACAAATAGCCC 59.267 55.000 0.00 0.00 0.00 5.19
1815 5176 0.742990 TCGCCTTCACAAATAGCCCG 60.743 55.000 0.00 0.00 0.00 6.13
1816 5177 1.433471 GCCTTCACAAATAGCCCGC 59.567 57.895 0.00 0.00 0.00 6.13
1817 5178 1.032114 GCCTTCACAAATAGCCCGCT 61.032 55.000 0.00 0.00 0.00 5.52
1818 5179 1.745827 GCCTTCACAAATAGCCCGCTA 60.746 52.381 0.00 0.00 0.00 4.26
1819 5180 2.851195 CCTTCACAAATAGCCCGCTAT 58.149 47.619 3.31 3.31 40.63 2.97
1820 5181 3.805807 GCCTTCACAAATAGCCCGCTATA 60.806 47.826 9.56 0.00 38.20 1.31
1821 5182 3.997021 CCTTCACAAATAGCCCGCTATAG 59.003 47.826 9.56 8.22 38.20 1.31
1822 5183 3.040147 TCACAAATAGCCCGCTATAGC 57.960 47.619 15.09 15.09 38.20 2.97
1823 5184 2.632996 TCACAAATAGCCCGCTATAGCT 59.367 45.455 21.98 6.31 43.20 3.32
1824 5185 2.738846 CACAAATAGCCCGCTATAGCTG 59.261 50.000 21.98 15.59 40.28 4.24
1825 5186 2.632996 ACAAATAGCCCGCTATAGCTGA 59.367 45.455 21.98 0.99 40.28 4.26
1826 5187 3.261897 ACAAATAGCCCGCTATAGCTGAT 59.738 43.478 21.98 13.94 40.28 2.90
1827 5188 4.256920 CAAATAGCCCGCTATAGCTGATT 58.743 43.478 21.98 9.01 40.28 2.57
1828 5189 4.559862 AATAGCCCGCTATAGCTGATTT 57.440 40.909 21.98 5.05 40.28 2.17
1829 5190 2.175878 AGCCCGCTATAGCTGATTTG 57.824 50.000 21.98 5.68 38.11 2.32
1830 5191 1.160137 GCCCGCTATAGCTGATTTGG 58.840 55.000 21.98 14.00 39.32 3.28
1831 5192 1.270839 GCCCGCTATAGCTGATTTGGA 60.271 52.381 21.98 0.00 39.32 3.53
1832 5193 2.693069 CCCGCTATAGCTGATTTGGAG 58.307 52.381 21.98 3.56 39.32 3.86
1833 5194 2.613977 CCCGCTATAGCTGATTTGGAGG 60.614 54.545 21.98 11.98 39.32 4.30
1834 5195 2.072298 CGCTATAGCTGATTTGGAGGC 58.928 52.381 21.98 0.00 39.32 4.70
1835 5196 2.431454 GCTATAGCTGATTTGGAGGCC 58.569 52.381 17.75 0.00 38.21 5.19
1836 5197 2.877708 GCTATAGCTGATTTGGAGGCCC 60.878 54.545 17.75 0.00 38.21 5.80
1837 5198 0.109342 ATAGCTGATTTGGAGGCCCG 59.891 55.000 0.00 0.00 34.29 6.13
1838 5199 2.608970 TAGCTGATTTGGAGGCCCGC 62.609 60.000 0.00 0.00 34.29 6.13
1839 5200 2.830370 CTGATTTGGAGGCCCGCC 60.830 66.667 0.00 1.12 34.29 6.13
1840 5201 4.794648 TGATTTGGAGGCCCGCCG 62.795 66.667 0.00 0.00 41.95 6.46
1846 5207 4.564110 GGAGGCCCGCCGCTATTT 62.564 66.667 9.41 0.00 41.95 1.40
1847 5208 2.516225 GAGGCCCGCCGCTATTTT 60.516 61.111 0.00 0.00 41.95 1.82
1848 5209 2.044352 AGGCCCGCCGCTATTTTT 60.044 55.556 0.00 0.00 41.95 1.94
1849 5210 2.060004 GAGGCCCGCCGCTATTTTTC 62.060 60.000 0.00 0.00 41.95 2.29
1850 5211 2.024163 GCCCGCCGCTATTTTTCG 59.976 61.111 0.00 0.00 0.00 3.46
1851 5212 2.757056 GCCCGCCGCTATTTTTCGT 61.757 57.895 0.00 0.00 0.00 3.85
1852 5213 1.430707 GCCCGCCGCTATTTTTCGTA 61.431 55.000 0.00 0.00 0.00 3.43
1853 5214 0.580104 CCCGCCGCTATTTTTCGTAG 59.420 55.000 0.00 0.00 0.00 3.51
1854 5215 0.042448 CCGCCGCTATTTTTCGTAGC 60.042 55.000 0.00 0.00 40.83 3.58
1855 5216 0.042448 CGCCGCTATTTTTCGTAGCC 60.042 55.000 0.00 0.00 41.10 3.93
1856 5217 0.306840 GCCGCTATTTTTCGTAGCCC 59.693 55.000 0.00 0.00 41.10 5.19
1857 5218 0.580104 CCGCTATTTTTCGTAGCCCG 59.420 55.000 0.00 0.00 41.10 6.13
1858 5219 0.042448 CGCTATTTTTCGTAGCCCGC 60.042 55.000 0.00 0.00 41.10 6.13
1859 5220 1.296727 GCTATTTTTCGTAGCCCGCT 58.703 50.000 0.00 0.00 38.85 5.52
1860 5221 2.476821 GCTATTTTTCGTAGCCCGCTA 58.523 47.619 0.00 0.00 38.85 4.26
1861 5222 3.064931 GCTATTTTTCGTAGCCCGCTAT 58.935 45.455 0.00 0.00 38.85 2.97
1862 5223 3.497262 GCTATTTTTCGTAGCCCGCTATT 59.503 43.478 0.00 0.00 38.85 1.73
1863 5224 4.024302 GCTATTTTTCGTAGCCCGCTATTT 60.024 41.667 0.00 0.00 38.85 1.40
1864 5225 5.178067 GCTATTTTTCGTAGCCCGCTATTTA 59.822 40.000 0.00 0.00 38.85 1.40
1865 5226 6.293027 GCTATTTTTCGTAGCCCGCTATTTAA 60.293 38.462 0.00 0.00 38.85 1.52
1866 5227 5.876612 TTTTTCGTAGCCCGCTATTTAAA 57.123 34.783 0.00 0.00 36.19 1.52
1867 5228 5.876612 TTTTCGTAGCCCGCTATTTAAAA 57.123 34.783 0.00 5.10 36.19 1.52
1868 5229 4.863152 TTCGTAGCCCGCTATTTAAAAC 57.137 40.909 0.00 0.00 36.19 2.43
1869 5230 3.859443 TCGTAGCCCGCTATTTAAAACA 58.141 40.909 0.00 0.00 36.19 2.83
1870 5231 4.444536 TCGTAGCCCGCTATTTAAAACAT 58.555 39.130 0.00 0.00 36.19 2.71
1871 5232 4.877251 TCGTAGCCCGCTATTTAAAACATT 59.123 37.500 0.00 0.00 36.19 2.71
1872 5233 6.047870 TCGTAGCCCGCTATTTAAAACATTA 58.952 36.000 0.00 0.00 36.19 1.90
1873 5234 6.201425 TCGTAGCCCGCTATTTAAAACATTAG 59.799 38.462 0.00 0.00 36.19 1.73
1874 5235 6.018507 CGTAGCCCGCTATTTAAAACATTAGT 60.019 38.462 0.00 0.00 0.00 2.24
1875 5236 6.131544 AGCCCGCTATTTAAAACATTAGTG 57.868 37.500 0.00 0.00 0.00 2.74
2031 5454 7.446931 TGTTTCTTCTAGTACAAAATGATGCCA 59.553 33.333 0.00 0.00 0.00 4.92
2041 5464 8.698210 AGTACAAAATGATGCCAATTATGATGT 58.302 29.630 0.00 0.00 0.00 3.06
2087 5654 5.747565 TGTTAGATCGAAGTTGTTTGCTTG 58.252 37.500 0.00 0.00 0.00 4.01
2132 5699 1.671328 TCTTCGATGTCTACCTGCTCG 59.329 52.381 0.00 0.00 0.00 5.03
2152 5727 6.434340 TGCTCGTATGGTCTATGAATATCTGT 59.566 38.462 0.00 0.00 0.00 3.41
2154 5729 7.575909 GCTCGTATGGTCTATGAATATCTGTGT 60.576 40.741 0.00 0.00 0.00 3.72
2261 5850 9.772973 ACTAGCATTAATTCGTTATTGGATGTA 57.227 29.630 0.00 0.00 0.00 2.29
2388 5987 3.781079 AGCTTTCTCACTCTCTGATCG 57.219 47.619 0.00 0.00 0.00 3.69
2535 6134 7.492524 TGTCATGCTACTGATAAGGAAACTAG 58.507 38.462 0.00 0.00 42.68 2.57
2577 6176 0.667993 TTCAAGTGCAAAGGGCTTCG 59.332 50.000 0.00 0.00 45.15 3.79
2585 6184 1.743772 GCAAAGGGCTTCGAGCATCTA 60.744 52.381 8.71 0.00 44.75 1.98
2606 6205 6.015918 TCTAATCCAGAAAAGGAAAATGCCA 58.984 36.000 0.00 0.00 41.92 4.92
2633 6250 2.780643 CAATGGCGTCAGTCAGCG 59.219 61.111 0.00 0.00 34.33 5.18
2729 6346 1.819632 GCACCGAATGTAGCCCCAG 60.820 63.158 0.00 0.00 0.00 4.45
2759 6376 0.038744 ACCAAGAGCATTCCCTGTGG 59.961 55.000 0.00 0.00 0.00 4.17
2848 6466 2.237143 CAGTGCACCAAGAGAATCCCTA 59.763 50.000 14.63 0.00 33.66 3.53
2896 6514 3.969287 ATGCTCACACTTCTCAAGCTA 57.031 42.857 0.00 0.00 34.11 3.32
2902 6520 3.005897 TCACACTTCTCAAGCTACTCACC 59.994 47.826 0.00 0.00 0.00 4.02
2903 6521 2.965831 ACACTTCTCAAGCTACTCACCA 59.034 45.455 0.00 0.00 0.00 4.17
2943 6561 1.006571 ACCAAGAGTGTACCGTGCG 60.007 57.895 0.00 0.00 0.00 5.34
2944 6562 1.287815 CCAAGAGTGTACCGTGCGA 59.712 57.895 0.00 0.00 0.00 5.10
2963 6581 3.732471 GCGACAAGAGCTGAAGGTAGTAG 60.732 52.174 0.00 0.00 0.00 2.57
2966 6584 5.163602 CGACAAGAGCTGAAGGTAGTAGAAT 60.164 44.000 0.00 0.00 0.00 2.40
2978 6596 5.665459 AGGTAGTAGAATCAATGCTCACAC 58.335 41.667 0.00 0.00 0.00 3.82
2989 6607 4.883585 TCAATGCTCACACTTCTCAAGTTT 59.116 37.500 0.00 0.00 40.46 2.66
3146 6926 1.915141 CCTGTGGCAAGAACTGGAAT 58.085 50.000 0.00 0.00 38.54 3.01
3354 7134 2.092968 GGACACACCAGAGGAATATGCA 60.093 50.000 0.00 0.00 38.79 3.96
3363 7143 3.581770 CAGAGGAATATGCATCAGAGGGA 59.418 47.826 0.19 0.00 0.00 4.20
3453 7233 0.782384 CCGGAGTCGTTGTTTTCTCG 59.218 55.000 0.00 0.00 33.95 4.04
3488 7268 8.782144 CCTTTTTAGCTCTTCATCATCCTTATC 58.218 37.037 0.00 0.00 0.00 1.75
3529 7309 3.909427 ATATGCCCCAAATCCATCACT 57.091 42.857 0.00 0.00 0.00 3.41
3573 7353 4.650734 TGGCAATCTGTTTCATCAGTACA 58.349 39.130 0.00 0.00 36.85 2.90
3575 7355 4.697352 GGCAATCTGTTTCATCAGTACAGT 59.303 41.667 0.00 0.00 40.08 3.55
3662 7443 6.716628 TCTCCTTGTTCTAAAATGCAGATGTT 59.283 34.615 0.00 0.00 0.00 2.71
3698 7479 0.183492 TGACAAAACAGGCCAGAGCT 59.817 50.000 5.01 0.00 39.73 4.09
3703 7484 1.999634 AAACAGGCCAGAGCTGTGGT 62.000 55.000 28.97 9.50 40.09 4.16
4039 7842 5.385198 ACTTTTCATGTGGACATTACAGGT 58.615 37.500 0.00 0.00 33.61 4.00
4086 7889 4.017808 GACGGTATATATCACAGCTCCCT 58.982 47.826 0.00 0.00 0.00 4.20
4115 7918 2.038033 TGGGTCTCCGTTCGAAATCTTT 59.962 45.455 0.00 0.00 35.24 2.52
4241 8044 3.920093 GACCAGGCGTTCAAGGGGG 62.920 68.421 0.00 0.00 0.00 5.40
4426 8229 1.067495 GTTTCGAGGGAGAGTCCACAG 60.067 57.143 0.00 0.00 38.64 3.66
4495 8298 2.689471 TCCTCCGAAATGCATGAATTGG 59.311 45.455 0.00 3.59 0.00 3.16
4515 8318 4.611367 TGGAAACCACAGTTTAGGGAAAA 58.389 39.130 0.00 0.00 46.25 2.29
4646 8460 0.321122 AGAGAAGTGCCCAAGCTTCG 60.321 55.000 0.00 0.00 44.07 3.79
4662 8476 3.068024 AGCTTCGATGAGATTGAGACCTC 59.932 47.826 1.89 0.00 0.00 3.85
4677 8491 3.744660 AGACCTCATGTTTGTTCTCCAC 58.255 45.455 0.00 0.00 0.00 4.02
4681 8495 3.631686 CCTCATGTTTGTTCTCCACAACA 59.368 43.478 0.00 0.00 45.54 3.33
4703 8517 1.134580 CCATGAGATTGAGACCGCAGT 60.135 52.381 0.00 0.00 0.00 4.40
4739 8553 2.814336 AGAGGTTTCAAATCGTTCAGCC 59.186 45.455 0.00 0.00 0.00 4.85
4753 8567 3.005791 CGTTCAGCCTTTCCTCCATTTTT 59.994 43.478 0.00 0.00 0.00 1.94
4761 8576 5.193679 CCTTTCCTCCATTTTTCCTCGTAT 58.806 41.667 0.00 0.00 0.00 3.06
4832 8647 3.764885 ACTCAGTTGTTTTGTGCTGAC 57.235 42.857 0.00 0.00 34.68 3.51
4853 8669 2.494530 GGGCGCCCAAACACTGAAA 61.495 57.895 40.73 0.00 35.81 2.69
4874 8690 3.653539 AAACGCCAAAATTGTACTCCC 57.346 42.857 0.00 0.00 0.00 4.30
4875 8691 2.579410 ACGCCAAAATTGTACTCCCT 57.421 45.000 0.00 0.00 0.00 4.20
4876 8692 2.433436 ACGCCAAAATTGTACTCCCTC 58.567 47.619 0.00 0.00 0.00 4.30
4877 8693 1.743394 CGCCAAAATTGTACTCCCTCC 59.257 52.381 0.00 0.00 0.00 4.30
4878 8694 1.743394 GCCAAAATTGTACTCCCTCCG 59.257 52.381 0.00 0.00 0.00 4.63
4879 8695 2.878526 GCCAAAATTGTACTCCCTCCGT 60.879 50.000 0.00 0.00 0.00 4.69
4880 8696 3.418047 CCAAAATTGTACTCCCTCCGTT 58.582 45.455 0.00 0.00 0.00 4.44
4881 8697 3.439129 CCAAAATTGTACTCCCTCCGTTC 59.561 47.826 0.00 0.00 0.00 3.95
4882 8698 2.667473 AATTGTACTCCCTCCGTTCG 57.333 50.000 0.00 0.00 0.00 3.95
4883 8699 0.822164 ATTGTACTCCCTCCGTTCGG 59.178 55.000 4.74 4.74 0.00 4.30
4884 8700 0.251297 TTGTACTCCCTCCGTTCGGA 60.251 55.000 13.34 13.34 0.00 4.55
4885 8701 0.251297 TGTACTCCCTCCGTTCGGAA 60.251 55.000 14.79 0.04 33.41 4.30
4886 8702 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
4887 8703 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
4888 8704 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
4889 8705 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
4890 8706 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
4891 8707 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
4892 8708 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
4893 8709 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
4894 8710 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
4895 8711 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
4896 8712 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
4897 8713 1.266211 CGTTCGGAATTACTTGTCGCG 60.266 52.381 0.00 0.00 0.00 5.87
4898 8714 1.060122 GTTCGGAATTACTTGTCGCGG 59.940 52.381 6.13 0.00 0.00 6.46
4899 8715 0.527113 TCGGAATTACTTGTCGCGGA 59.473 50.000 6.13 0.00 0.00 5.54
4900 8716 1.067706 TCGGAATTACTTGTCGCGGAA 60.068 47.619 6.13 0.00 0.00 4.30
4901 8717 1.727880 CGGAATTACTTGTCGCGGAAA 59.272 47.619 6.13 0.00 0.00 3.13
4902 8718 2.350498 CGGAATTACTTGTCGCGGAAAT 59.650 45.455 6.13 0.00 0.00 2.17
4903 8719 3.680789 GGAATTACTTGTCGCGGAAATG 58.319 45.455 6.13 0.00 0.00 2.32
4904 8720 3.486875 GGAATTACTTGTCGCGGAAATGG 60.487 47.826 6.13 0.00 0.00 3.16
4905 8721 2.459060 TTACTTGTCGCGGAAATGGA 57.541 45.000 6.13 0.00 0.00 3.41
4906 8722 2.684001 TACTTGTCGCGGAAATGGAT 57.316 45.000 6.13 0.00 0.00 3.41
4907 8723 1.086696 ACTTGTCGCGGAAATGGATG 58.913 50.000 6.13 0.00 0.00 3.51
4908 8724 1.086696 CTTGTCGCGGAAATGGATGT 58.913 50.000 6.13 0.00 0.00 3.06
4909 8725 2.276201 CTTGTCGCGGAAATGGATGTA 58.724 47.619 6.13 0.00 0.00 2.29
4910 8726 2.613026 TGTCGCGGAAATGGATGTAT 57.387 45.000 6.13 0.00 0.00 2.29
4911 8727 2.479837 TGTCGCGGAAATGGATGTATC 58.520 47.619 6.13 0.00 0.00 2.24
4912 8728 2.102420 TGTCGCGGAAATGGATGTATCT 59.898 45.455 6.13 0.00 0.00 1.98
4913 8729 3.319689 TGTCGCGGAAATGGATGTATCTA 59.680 43.478 6.13 0.00 0.00 1.98
4914 8730 3.921021 GTCGCGGAAATGGATGTATCTAG 59.079 47.826 6.13 0.00 0.00 2.43
4915 8731 3.824443 TCGCGGAAATGGATGTATCTAGA 59.176 43.478 6.13 0.00 0.00 2.43
4916 8732 3.921021 CGCGGAAATGGATGTATCTAGAC 59.079 47.826 0.00 0.00 0.00 2.59
4917 8733 3.921021 GCGGAAATGGATGTATCTAGACG 59.079 47.826 0.00 0.00 0.00 4.18
4918 8734 4.558898 GCGGAAATGGATGTATCTAGACGT 60.559 45.833 0.00 0.00 0.00 4.34
4919 8735 5.335426 GCGGAAATGGATGTATCTAGACGTA 60.335 44.000 0.00 0.00 0.00 3.57
4920 8736 6.625300 GCGGAAATGGATGTATCTAGACGTAT 60.625 42.308 0.00 0.00 0.00 3.06
4921 8737 7.313646 CGGAAATGGATGTATCTAGACGTATT 58.686 38.462 0.00 0.00 0.00 1.89
4922 8738 7.813148 CGGAAATGGATGTATCTAGACGTATTT 59.187 37.037 0.00 0.00 0.00 1.40
4923 8739 9.490379 GGAAATGGATGTATCTAGACGTATTTT 57.510 33.333 0.00 0.00 0.00 1.82
4947 8763 9.749340 TTTAGTTCTAGATACATCCATATCCGA 57.251 33.333 0.00 0.00 32.76 4.55
4948 8764 7.873719 AGTTCTAGATACATCCATATCCGAG 57.126 40.000 0.00 0.00 32.76 4.63
4949 8765 7.634718 AGTTCTAGATACATCCATATCCGAGA 58.365 38.462 0.00 0.00 32.76 4.04
4950 8766 7.554835 AGTTCTAGATACATCCATATCCGAGAC 59.445 40.741 0.00 0.00 32.76 3.36
4951 8767 6.958767 TCTAGATACATCCATATCCGAGACA 58.041 40.000 0.00 0.00 32.76 3.41
4952 8768 7.402862 TCTAGATACATCCATATCCGAGACAA 58.597 38.462 0.00 0.00 32.76 3.18
4953 8769 6.522625 AGATACATCCATATCCGAGACAAG 57.477 41.667 0.00 0.00 32.76 3.16
4954 8770 6.013379 AGATACATCCATATCCGAGACAAGT 58.987 40.000 0.00 0.00 32.76 3.16
4955 8771 7.175797 AGATACATCCATATCCGAGACAAGTA 58.824 38.462 0.00 0.00 32.76 2.24
4956 8772 7.670140 AGATACATCCATATCCGAGACAAGTAA 59.330 37.037 0.00 0.00 32.76 2.24
4957 8773 6.672266 ACATCCATATCCGAGACAAGTAAT 57.328 37.500 0.00 0.00 0.00 1.89
4958 8774 7.067496 ACATCCATATCCGAGACAAGTAATT 57.933 36.000 0.00 0.00 0.00 1.40
4959 8775 7.155328 ACATCCATATCCGAGACAAGTAATTC 58.845 38.462 0.00 0.00 0.00 2.17
4960 8776 6.097915 TCCATATCCGAGACAAGTAATTCC 57.902 41.667 0.00 0.00 0.00 3.01
4961 8777 4.923871 CCATATCCGAGACAAGTAATTCCG 59.076 45.833 0.00 0.00 0.00 4.30
4962 8778 5.278808 CCATATCCGAGACAAGTAATTCCGA 60.279 44.000 0.00 0.00 0.00 4.55
4963 8779 4.730949 ATCCGAGACAAGTAATTCCGAA 57.269 40.909 0.00 0.00 0.00 4.30
4964 8780 4.730949 TCCGAGACAAGTAATTCCGAAT 57.269 40.909 0.00 0.00 0.00 3.34
4965 8781 4.430007 TCCGAGACAAGTAATTCCGAATG 58.570 43.478 0.00 0.00 0.00 2.67
4966 8782 3.555956 CCGAGACAAGTAATTCCGAATGG 59.444 47.826 0.00 0.00 0.00 3.16
4967 8783 4.430007 CGAGACAAGTAATTCCGAATGGA 58.570 43.478 0.00 0.00 44.61 3.41
4986 8802 2.541556 GAGGGAGTATCTTTGTCACGC 58.458 52.381 0.00 0.00 33.73 5.34
5002 8818 0.949105 ACGCGCTGAAACTTAGGTGG 60.949 55.000 5.73 0.00 0.00 4.61
5017 8835 1.378646 GTGGCCCCTAGCTGGTTTC 60.379 63.158 0.00 0.00 43.05 2.78
5042 9162 9.026121 TCTATGATCTATAGCAAAGGGACTAAC 57.974 37.037 0.00 0.00 37.16 2.34
5085 9205 6.544931 CCAAAGATGCTATTTCTGGAAGATGA 59.455 38.462 0.00 0.00 46.36 2.92
5105 9225 5.903198 TGATTTTCCACCCCTCAATTTTT 57.097 34.783 0.00 0.00 0.00 1.94
5106 9226 5.619220 TGATTTTCCACCCCTCAATTTTTG 58.381 37.500 0.00 0.00 0.00 2.44
5152 9272 6.916360 AAATTGAGGAGAAAAGTATTGGCA 57.084 33.333 0.00 0.00 0.00 4.92
5153 9273 6.916360 AATTGAGGAGAAAAGTATTGGCAA 57.084 33.333 0.68 0.68 0.00 4.52
5167 9287 8.823220 AAGTATTGGCAATATTAAGGACAGTT 57.177 30.769 21.82 5.77 0.00 3.16
5172 9292 8.815565 TTGGCAATATTAAGGACAGTTTCATA 57.184 30.769 0.00 0.00 0.00 2.15
5195 9315 2.394930 TAAAGCATCTACAGCCGCAA 57.605 45.000 0.00 0.00 0.00 4.85
5200 9320 1.442769 CATCTACAGCCGCAAACACT 58.557 50.000 0.00 0.00 0.00 3.55
5208 9328 0.800012 GCCGCAAACACTAAATCCGA 59.200 50.000 0.00 0.00 0.00 4.55
5209 9329 1.465187 GCCGCAAACACTAAATCCGAC 60.465 52.381 0.00 0.00 0.00 4.79
5218 9338 3.265995 ACACTAAATCCGACCCCTCAAAT 59.734 43.478 0.00 0.00 0.00 2.32
5225 9345 3.936772 GACCCCTCAAATGCCCGCA 62.937 63.158 0.00 0.00 0.00 5.69
5228 9348 1.454479 CCCTCAAATGCCCGCAGAT 60.454 57.895 0.00 0.00 0.00 2.90
5298 9422 2.605607 CCCACAGCCATGTCCCTCA 61.606 63.158 0.00 0.00 37.65 3.86
5311 9435 1.700186 GTCCCTCATATCTGAACCCCC 59.300 57.143 0.00 0.00 0.00 5.40
5350 9474 3.616821 TGCAATGCTACGTAGATGAACAC 59.383 43.478 26.53 6.95 0.00 3.32
5351 9475 3.616821 GCAATGCTACGTAGATGAACACA 59.383 43.478 26.53 12.48 0.00 3.72
5367 9817 8.454106 AGATGAACACACTTAATAGCAACAATC 58.546 33.333 0.00 0.00 0.00 2.67
5408 9858 7.306807 CGATACAAAAGCATCATAGTTCATCGT 60.307 37.037 0.00 0.00 0.00 3.73
5415 9865 4.359706 CATCATAGTTCATCGTCGGACAA 58.640 43.478 9.10 0.00 0.00 3.18
5429 9879 4.261031 CGTCGGACAAAAGGATCAAAGTTT 60.261 41.667 9.10 0.00 0.00 2.66
5443 9893 5.247507 TCAAAGTTTGATGTTGGACAGTG 57.752 39.130 14.35 0.00 34.08 3.66
5444 9894 3.715628 AAGTTTGATGTTGGACAGTGC 57.284 42.857 0.00 0.00 0.00 4.40
5445 9895 2.653726 AGTTTGATGTTGGACAGTGCA 58.346 42.857 0.00 0.00 0.00 4.57
5446 9896 3.023119 AGTTTGATGTTGGACAGTGCAA 58.977 40.909 2.84 2.84 0.00 4.08
5447 9897 3.446873 AGTTTGATGTTGGACAGTGCAAA 59.553 39.130 9.37 0.92 30.59 3.68
5448 9898 4.099881 AGTTTGATGTTGGACAGTGCAAAT 59.900 37.500 9.37 5.73 33.47 2.32
5449 9899 3.921119 TGATGTTGGACAGTGCAAATC 57.079 42.857 9.37 13.88 26.96 2.17
5450 9900 2.557924 TGATGTTGGACAGTGCAAATCC 59.442 45.455 9.37 5.39 26.96 3.01
5451 9901 2.064434 TGTTGGACAGTGCAAATCCA 57.936 45.000 9.37 10.11 40.83 3.41
5452 9902 2.596346 TGTTGGACAGTGCAAATCCAT 58.404 42.857 9.37 0.00 42.09 3.41
5453 9903 3.760738 TGTTGGACAGTGCAAATCCATA 58.239 40.909 9.37 5.85 42.09 2.74
5454 9904 3.505680 TGTTGGACAGTGCAAATCCATAC 59.494 43.478 9.37 14.04 42.09 2.39
5455 9905 3.719268 TGGACAGTGCAAATCCATACT 57.281 42.857 10.11 0.00 37.60 2.12
5456 9906 4.835284 TGGACAGTGCAAATCCATACTA 57.165 40.909 10.11 0.00 37.60 1.82
5457 9907 5.172687 TGGACAGTGCAAATCCATACTAA 57.827 39.130 10.11 0.00 37.60 2.24
5458 9908 5.565509 TGGACAGTGCAAATCCATACTAAA 58.434 37.500 10.11 0.00 37.60 1.85
5459 9909 6.007076 TGGACAGTGCAAATCCATACTAAAA 58.993 36.000 10.11 0.00 37.60 1.52
5460 9910 6.491745 TGGACAGTGCAAATCCATACTAAAAA 59.508 34.615 10.11 0.00 37.60 1.94
5497 9948 1.652947 AAACTAAGAAGGGCGGAGGA 58.347 50.000 0.00 0.00 0.00 3.71
5517 9968 1.923356 AATCACCATTTCCTTGCCGT 58.077 45.000 0.00 0.00 0.00 5.68
5530 9981 3.373565 GCCGTGCCTTTCCCCTTG 61.374 66.667 0.00 0.00 0.00 3.61
5531 9982 3.373565 CCGTGCCTTTCCCCTTGC 61.374 66.667 0.00 0.00 0.00 4.01
5536 9987 2.746277 CCTTTCCCCTTGCGGTCG 60.746 66.667 0.00 0.00 0.00 4.79
5556 10007 2.800736 GGTGCGATTGTGCCCATC 59.199 61.111 0.00 0.00 0.00 3.51
5558 10009 1.750399 GTGCGATTGTGCCCATCCT 60.750 57.895 0.00 0.00 0.00 3.24
5568 10019 1.077716 GCCCATCCTTGTAGGCGTT 60.078 57.895 0.00 0.00 35.30 4.84
5569 10020 1.376609 GCCCATCCTTGTAGGCGTTG 61.377 60.000 0.00 0.00 35.30 4.10
5570 10021 0.748005 CCCATCCTTGTAGGCGTTGG 60.748 60.000 0.00 0.00 34.61 3.77
5571 10022 1.376609 CCATCCTTGTAGGCGTTGGC 61.377 60.000 0.00 0.00 34.61 4.52
5572 10023 0.676466 CATCCTTGTAGGCGTTGGCA 60.676 55.000 0.00 0.00 42.47 4.92
5573 10024 0.255890 ATCCTTGTAGGCGTTGGCAT 59.744 50.000 0.00 0.00 42.47 4.40
5574 10025 0.392461 TCCTTGTAGGCGTTGGCATC 60.392 55.000 0.00 0.00 42.47 3.91
5575 10026 1.376609 CCTTGTAGGCGTTGGCATCC 61.377 60.000 0.00 0.00 42.47 3.51
5576 10027 1.705337 CTTGTAGGCGTTGGCATCCG 61.705 60.000 3.03 3.03 42.47 4.18
5577 10028 2.125269 GTAGGCGTTGGCATCCGT 60.125 61.111 8.55 0.00 42.47 4.69
5578 10029 1.743995 GTAGGCGTTGGCATCCGTT 60.744 57.895 8.55 1.67 42.47 4.44
5579 10030 0.460635 GTAGGCGTTGGCATCCGTTA 60.461 55.000 8.55 0.89 42.47 3.18
5580 10031 0.460635 TAGGCGTTGGCATCCGTTAC 60.461 55.000 8.55 0.00 42.47 2.50
5581 10032 2.398036 GCGTTGGCATCCGTTACG 59.602 61.111 0.00 0.00 39.62 3.18
5582 10033 2.385091 GCGTTGGCATCCGTTACGT 61.385 57.895 3.52 0.00 39.62 3.57
5583 10034 1.903783 GCGTTGGCATCCGTTACGTT 61.904 55.000 3.52 0.00 39.62 3.99
5584 10035 0.094046 CGTTGGCATCCGTTACGTTC 59.906 55.000 3.52 0.00 0.00 3.95
5585 10036 0.094046 GTTGGCATCCGTTACGTTCG 59.906 55.000 3.52 0.00 0.00 3.95
5586 10037 0.038435 TTGGCATCCGTTACGTTCGA 60.038 50.000 12.98 0.00 0.00 3.71
5587 10038 0.457166 TGGCATCCGTTACGTTCGAG 60.457 55.000 12.98 5.18 0.00 4.04
5588 10039 0.457337 GGCATCCGTTACGTTCGAGT 60.457 55.000 12.98 0.84 0.00 4.18
5589 10040 0.912528 GCATCCGTTACGTTCGAGTC 59.087 55.000 12.98 0.00 0.00 3.36
5590 10041 1.177668 CATCCGTTACGTTCGAGTCG 58.822 55.000 6.09 6.09 0.00 4.18
5591 10042 0.798776 ATCCGTTACGTTCGAGTCGT 59.201 50.000 13.12 18.41 43.86 4.34
5592 10043 0.586319 TCCGTTACGTTCGAGTCGTT 59.414 50.000 19.27 7.41 41.72 3.85
5593 10044 0.699151 CCGTTACGTTCGAGTCGTTG 59.301 55.000 19.27 6.18 41.72 4.10
5594 10045 1.388888 CGTTACGTTCGAGTCGTTGT 58.611 50.000 19.27 11.68 41.72 3.32
5595 10046 1.376856 CGTTACGTTCGAGTCGTTGTC 59.623 52.381 19.27 11.11 41.72 3.18
5596 10047 1.376856 GTTACGTTCGAGTCGTTGTCG 59.623 52.381 19.27 14.34 41.72 4.35
5597 10048 0.858583 TACGTTCGAGTCGTTGTCGA 59.141 50.000 19.27 3.07 44.48 4.20
5607 10058 2.661504 TCGTTGTCGAAGCACATTTG 57.338 45.000 0.00 0.00 43.34 2.32
5608 10059 1.262950 TCGTTGTCGAAGCACATTTGG 59.737 47.619 0.00 0.00 43.34 3.28
5609 10060 1.408422 GTTGTCGAAGCACATTTGGC 58.592 50.000 0.00 0.00 0.00 4.52
5610 10061 0.313672 TTGTCGAAGCACATTTGGCC 59.686 50.000 0.00 0.00 0.00 5.36
5611 10062 1.212751 GTCGAAGCACATTTGGCCC 59.787 57.895 0.00 0.00 0.00 5.80
5612 10063 1.228398 TCGAAGCACATTTGGCCCA 60.228 52.632 0.00 0.00 0.00 5.36
5613 10064 0.611618 TCGAAGCACATTTGGCCCAT 60.612 50.000 0.00 0.00 0.00 4.00
5614 10065 0.179129 CGAAGCACATTTGGCCCATC 60.179 55.000 0.00 0.00 0.00 3.51
5615 10066 0.179129 GAAGCACATTTGGCCCATCG 60.179 55.000 0.00 0.00 0.00 3.84
5616 10067 1.606885 AAGCACATTTGGCCCATCGG 61.607 55.000 0.00 0.00 0.00 4.18
5627 10078 4.113815 CCATCGGCCTTGGGAGCA 62.114 66.667 12.66 0.00 0.00 4.26
5628 10079 2.045045 CATCGGCCTTGGGAGCAA 60.045 61.111 0.00 0.00 0.00 3.91
5629 10080 2.117156 CATCGGCCTTGGGAGCAAG 61.117 63.158 0.00 0.00 0.00 4.01
5630 10081 4.722700 TCGGCCTTGGGAGCAAGC 62.723 66.667 0.00 0.00 0.00 4.01
5634 10085 2.747855 CCTTGGGAGCAAGCGGTC 60.748 66.667 0.00 0.00 39.00 4.79
5640 10091 4.816990 GAGCAAGCGGTCCTACTC 57.183 61.111 0.00 0.00 33.34 2.59
5641 10092 1.142097 GAGCAAGCGGTCCTACTCC 59.858 63.158 0.00 0.00 33.34 3.85
5642 10093 1.305381 AGCAAGCGGTCCTACTCCT 60.305 57.895 0.00 0.00 0.00 3.69
5643 10094 0.905337 AGCAAGCGGTCCTACTCCTT 60.905 55.000 0.00 0.00 0.00 3.36
5644 10095 0.460459 GCAAGCGGTCCTACTCCTTC 60.460 60.000 0.00 0.00 0.00 3.46
5645 10096 0.179134 CAAGCGGTCCTACTCCTTCG 60.179 60.000 0.00 0.00 0.00 3.79
5646 10097 1.946475 AAGCGGTCCTACTCCTTCGC 61.946 60.000 0.00 0.00 42.91 4.70
5647 10098 2.707849 GCGGTCCTACTCCTTCGCA 61.708 63.158 0.00 0.00 42.27 5.10
5648 10099 2.017559 GCGGTCCTACTCCTTCGCAT 62.018 60.000 0.00 0.00 42.27 4.73
5649 10100 0.030908 CGGTCCTACTCCTTCGCATC 59.969 60.000 0.00 0.00 0.00 3.91
5650 10101 0.389757 GGTCCTACTCCTTCGCATCC 59.610 60.000 0.00 0.00 0.00 3.51
5651 10102 1.404843 GTCCTACTCCTTCGCATCCT 58.595 55.000 0.00 0.00 0.00 3.24
5652 10103 1.067821 GTCCTACTCCTTCGCATCCTG 59.932 57.143 0.00 0.00 0.00 3.86
5653 10104 0.390860 CCTACTCCTTCGCATCCTGG 59.609 60.000 0.00 0.00 0.00 4.45
5654 10105 0.390860 CTACTCCTTCGCATCCTGGG 59.609 60.000 0.00 0.00 0.00 4.45
5655 10106 1.686325 TACTCCTTCGCATCCTGGGC 61.686 60.000 0.00 0.00 0.00 5.36
5656 10107 3.764160 CTCCTTCGCATCCTGGGCC 62.764 68.421 0.00 0.00 0.00 5.80
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 80 1.045407 AGGAGAAACGTAGGTGTGCA 58.955 50.000 0.00 0.00 0.00 4.57
895 909 3.428452 CGCGGGTGATTAACAGAAGACTA 60.428 47.826 0.00 0.00 0.00 2.59
896 910 2.674177 CGCGGGTGATTAACAGAAGACT 60.674 50.000 0.00 0.00 0.00 3.24
897 911 1.659098 CGCGGGTGATTAACAGAAGAC 59.341 52.381 0.00 0.00 0.00 3.01
927 941 2.359900 GCACGAGATTTTGGTGATCCT 58.640 47.619 0.00 0.00 33.58 3.24
1064 1084 3.385755 GGAATGCAGCAAAATATCCTGGT 59.614 43.478 0.00 0.00 0.00 4.00
1095 1115 1.375140 CCATCGATCCAGCCATCCG 60.375 63.158 0.00 0.00 0.00 4.18
1218 1238 1.399744 ATCCTTCCGCACGCAGGATA 61.400 55.000 16.29 0.00 44.30 2.59
1421 1444 2.824880 CCCCTTCCGTCCCACAACA 61.825 63.158 0.00 0.00 0.00 3.33
1520 1567 2.896854 CATACGCATGCCCGCAGT 60.897 61.111 13.15 6.24 0.00 4.40
1522 1569 2.939133 ATCACATACGCATGCCCGCA 62.939 55.000 13.15 0.00 35.39 5.69
1524 1571 0.662619 AAATCACATACGCATGCCCG 59.337 50.000 13.15 0.85 35.39 6.13
1532 4874 3.060978 TCGACTCCGAAATCACATACG 57.939 47.619 0.00 0.00 42.51 3.06
1618 4979 7.816945 AGATTTCATTTAAGGAAATTGCGTG 57.183 32.000 16.83 0.00 43.12 5.34
1688 5049 5.909621 AACAGCTTGCACATTATCTGAAT 57.090 34.783 0.00 0.00 0.00 2.57
1713 5074 4.096833 TGCTACAAGTTGAATGATGCATCC 59.903 41.667 23.67 9.24 0.00 3.51
1721 5082 5.643348 TGGACACTATGCTACAAGTTGAATG 59.357 40.000 10.54 0.20 0.00 2.67
1744 5105 7.685594 GCTATAGCCGGCTATTTAAAACTATG 58.314 38.462 44.65 24.19 39.65 2.23
1745 5106 7.845066 GCTATAGCCGGCTATTTAAAACTAT 57.155 36.000 44.65 26.21 39.65 2.12
1762 5123 2.225467 CCCTGCTGAAAAGGCTATAGC 58.775 52.381 16.78 16.78 41.14 2.97
1763 5124 3.209410 CACCCTGCTGAAAAGGCTATAG 58.791 50.000 0.00 0.00 33.07 1.31
1764 5125 2.683742 GCACCCTGCTGAAAAGGCTATA 60.684 50.000 0.00 0.00 40.96 1.31
1765 5126 1.957113 GCACCCTGCTGAAAAGGCTAT 60.957 52.381 0.00 0.00 40.96 2.97
1766 5127 0.609131 GCACCCTGCTGAAAAGGCTA 60.609 55.000 0.00 0.00 40.96 3.93
1767 5128 1.905354 GCACCCTGCTGAAAAGGCT 60.905 57.895 0.00 0.00 40.96 4.58
1768 5129 2.653115 GCACCCTGCTGAAAAGGC 59.347 61.111 0.00 0.00 40.96 4.35
1769 5130 3.369921 GGCACCCTGCTGAAAAGG 58.630 61.111 0.00 0.00 44.28 3.11
1776 5137 1.750399 CATTTAGCGGCACCCTGCT 60.750 57.895 1.45 2.32 44.28 4.24
1777 5138 2.774799 CCATTTAGCGGCACCCTGC 61.775 63.158 1.45 0.00 44.08 4.85
1778 5139 1.376609 GACCATTTAGCGGCACCCTG 61.377 60.000 1.45 0.00 0.00 4.45
1779 5140 1.077716 GACCATTTAGCGGCACCCT 60.078 57.895 1.45 0.00 0.00 4.34
1780 5141 2.469516 CGACCATTTAGCGGCACCC 61.470 63.158 1.45 0.00 0.00 4.61
1781 5142 3.098555 CGACCATTTAGCGGCACC 58.901 61.111 1.45 0.00 0.00 5.01
1782 5143 2.403586 GCGACCATTTAGCGGCAC 59.596 61.111 1.45 0.00 0.00 5.01
1785 5146 0.742990 TGAAGGCGACCATTTAGCGG 60.743 55.000 0.00 0.00 0.00 5.52
1786 5147 0.373716 GTGAAGGCGACCATTTAGCG 59.626 55.000 0.00 0.00 0.00 4.26
1787 5148 1.448985 TGTGAAGGCGACCATTTAGC 58.551 50.000 0.00 0.00 0.00 3.09
1788 5149 4.701956 ATTTGTGAAGGCGACCATTTAG 57.298 40.909 0.00 0.00 0.00 1.85
1789 5150 4.095782 GCTATTTGTGAAGGCGACCATTTA 59.904 41.667 0.00 0.00 0.00 1.40
1790 5151 3.119495 GCTATTTGTGAAGGCGACCATTT 60.119 43.478 0.00 0.00 0.00 2.32
1791 5152 2.423538 GCTATTTGTGAAGGCGACCATT 59.576 45.455 0.00 0.00 0.00 3.16
1792 5153 2.017049 GCTATTTGTGAAGGCGACCAT 58.983 47.619 0.00 0.00 0.00 3.55
1793 5154 1.448985 GCTATTTGTGAAGGCGACCA 58.551 50.000 0.00 0.00 0.00 4.02
1794 5155 0.733150 GGCTATTTGTGAAGGCGACC 59.267 55.000 0.00 0.00 0.00 4.79
1795 5156 0.733150 GGGCTATTTGTGAAGGCGAC 59.267 55.000 0.00 0.00 39.08 5.19
1796 5157 0.742990 CGGGCTATTTGTGAAGGCGA 60.743 55.000 0.00 0.00 39.08 5.54
1797 5158 1.721487 CGGGCTATTTGTGAAGGCG 59.279 57.895 0.00 0.00 39.08 5.52
1798 5159 1.032114 AGCGGGCTATTTGTGAAGGC 61.032 55.000 0.00 0.00 37.55 4.35
1799 5160 2.325583 TAGCGGGCTATTTGTGAAGG 57.674 50.000 0.00 0.00 0.00 3.46
1800 5161 3.433615 GCTATAGCGGGCTATTTGTGAAG 59.566 47.826 17.49 9.39 39.65 3.02
1801 5162 3.399330 GCTATAGCGGGCTATTTGTGAA 58.601 45.455 17.49 0.00 39.65 3.18
1802 5163 3.040147 GCTATAGCGGGCTATTTGTGA 57.960 47.619 17.49 0.00 39.65 3.58
1815 5176 2.431454 GGCCTCCAAATCAGCTATAGC 58.569 52.381 17.33 17.33 42.49 2.97
1816 5177 2.613977 CGGGCCTCCAAATCAGCTATAG 60.614 54.545 0.84 0.00 0.00 1.31
1817 5178 1.347707 CGGGCCTCCAAATCAGCTATA 59.652 52.381 0.84 0.00 0.00 1.31
1818 5179 0.109342 CGGGCCTCCAAATCAGCTAT 59.891 55.000 0.84 0.00 0.00 2.97
1819 5180 1.526887 CGGGCCTCCAAATCAGCTA 59.473 57.895 0.84 0.00 0.00 3.32
1820 5181 2.273449 CGGGCCTCCAAATCAGCT 59.727 61.111 0.84 0.00 0.00 4.24
1821 5182 3.521796 GCGGGCCTCCAAATCAGC 61.522 66.667 0.84 0.00 0.00 4.26
1822 5183 2.830370 GGCGGGCCTCCAAATCAG 60.830 66.667 7.92 0.00 0.00 2.90
1823 5184 4.794648 CGGCGGGCCTCCAAATCA 62.795 66.667 13.99 0.00 0.00 2.57
1829 5190 4.564110 AAATAGCGGCGGGCCTCC 62.564 66.667 9.78 1.28 45.17 4.30
1830 5191 2.060004 GAAAAATAGCGGCGGGCCTC 62.060 60.000 9.78 0.00 45.17 4.70
1831 5192 2.044352 AAAAATAGCGGCGGGCCT 60.044 55.556 9.78 0.00 45.17 5.19
1832 5193 2.411701 GAAAAATAGCGGCGGGCC 59.588 61.111 9.78 0.00 45.17 5.80
1833 5194 1.430707 TACGAAAAATAGCGGCGGGC 61.431 55.000 9.78 0.00 44.05 6.13
1834 5195 0.580104 CTACGAAAAATAGCGGCGGG 59.420 55.000 9.78 0.00 0.00 6.13
1835 5196 0.042448 GCTACGAAAAATAGCGGCGG 60.042 55.000 9.78 0.00 36.02 6.13
1836 5197 0.042448 GGCTACGAAAAATAGCGGCG 60.042 55.000 0.51 0.51 45.05 6.46
1837 5198 0.306840 GGGCTACGAAAAATAGCGGC 59.693 55.000 0.00 0.00 45.05 6.53
1850 5211 7.130269 CACTAATGTTTTAAATAGCGGGCTAC 58.870 38.462 1.91 0.00 0.00 3.58
1851 5212 6.824704 ACACTAATGTTTTAAATAGCGGGCTA 59.175 34.615 2.42 2.42 34.46 3.93
1852 5213 5.650703 ACACTAATGTTTTAAATAGCGGGCT 59.349 36.000 0.00 0.00 34.46 5.19
1853 5214 5.886992 ACACTAATGTTTTAAATAGCGGGC 58.113 37.500 0.00 0.00 34.46 6.13
1854 5215 7.186804 CAGACACTAATGTTTTAAATAGCGGG 58.813 38.462 0.00 0.00 39.95 6.13
1855 5216 6.687105 GCAGACACTAATGTTTTAAATAGCGG 59.313 38.462 0.00 0.00 39.95 5.52
1856 5217 6.687105 GGCAGACACTAATGTTTTAAATAGCG 59.313 38.462 0.00 0.00 39.95 4.26
1857 5218 6.687105 CGGCAGACACTAATGTTTTAAATAGC 59.313 38.462 0.00 0.00 39.95 2.97
1858 5219 7.748847 ACGGCAGACACTAATGTTTTAAATAG 58.251 34.615 0.00 0.00 39.95 1.73
1859 5220 7.675962 ACGGCAGACACTAATGTTTTAAATA 57.324 32.000 0.00 0.00 39.95 1.40
1860 5221 6.569179 ACGGCAGACACTAATGTTTTAAAT 57.431 33.333 0.00 0.00 39.95 1.40
1861 5222 6.202937 CAACGGCAGACACTAATGTTTTAAA 58.797 36.000 0.00 0.00 39.95 1.52
1862 5223 5.753744 CAACGGCAGACACTAATGTTTTAA 58.246 37.500 0.00 0.00 39.95 1.52
1863 5224 4.319911 GCAACGGCAGACACTAATGTTTTA 60.320 41.667 0.00 0.00 38.61 1.52
1864 5225 3.550030 GCAACGGCAGACACTAATGTTTT 60.550 43.478 0.00 0.00 38.61 2.43
1865 5226 2.031157 GCAACGGCAGACACTAATGTTT 60.031 45.455 0.00 0.00 38.61 2.83
1866 5227 1.535462 GCAACGGCAGACACTAATGTT 59.465 47.619 0.00 0.00 38.61 2.71
1867 5228 1.156736 GCAACGGCAGACACTAATGT 58.843 50.000 0.00 0.00 40.36 2.71
1868 5229 3.975992 GCAACGGCAGACACTAATG 57.024 52.632 0.00 0.00 40.72 1.90
1933 5325 7.874528 TGTATGGCTGACTATCAATACAGAATG 59.125 37.037 0.00 0.00 46.00 2.67
1971 5378 0.250858 CAGCAGTGACCATGAACCCA 60.251 55.000 0.00 0.00 0.00 4.51
2031 5454 8.853077 TCTTCTCTTGAACACACATCATAATT 57.147 30.769 0.00 0.00 0.00 1.40
2041 5464 8.055279 ACAATTTTTCTCTTCTCTTGAACACA 57.945 30.769 0.00 0.00 0.00 3.72
2117 5684 2.623889 ACCATACGAGCAGGTAGACATC 59.376 50.000 0.00 0.00 32.92 3.06
2217 5803 5.255710 CTAGTGCAGCTTCACAGTAGTAT 57.744 43.478 18.79 0.00 39.35 2.12
2261 5850 1.693062 CTGCATGCTACCTGGAGAGAT 59.307 52.381 20.33 0.00 34.31 2.75
2388 5987 2.791383 TTGTAGCACATTGCCAACAC 57.209 45.000 4.01 0.00 46.52 3.32
2535 6134 1.338020 CAAGCCTCAGTGTTTTCCACC 59.662 52.381 0.00 0.00 45.74 4.61
2577 6176 7.396540 TTTTCCTTTTCTGGATTAGATGCTC 57.603 36.000 0.00 0.00 35.83 4.26
2585 6184 5.013391 ACATGGCATTTTCCTTTTCTGGATT 59.987 36.000 0.00 0.00 35.83 3.01
2606 6205 0.748005 GACGCCATTGCTGGGTACAT 60.748 55.000 0.00 0.00 43.36 2.29
2729 6346 1.849976 GCTCTTGGTGCACTGACAGC 61.850 60.000 17.98 15.06 38.53 4.40
2759 6376 1.082690 GTGCTACCTTCAGCTCTTGC 58.917 55.000 0.00 0.00 42.30 4.01
2848 6466 1.088306 CTACCTTCAGCTCTCGTCGT 58.912 55.000 0.00 0.00 0.00 4.34
2896 6514 0.673644 GTTGGCGCTACATGGTGAGT 60.674 55.000 7.64 0.00 0.00 3.41
2902 6520 1.134487 CAACGGTTGGCGCTACATG 59.866 57.895 13.03 5.35 0.00 3.21
2903 6521 2.038269 CCAACGGTTGGCGCTACAT 61.038 57.895 25.60 0.00 45.17 2.29
2933 6551 1.372499 GCTCTTGTCGCACGGTACA 60.372 57.895 0.00 0.00 0.00 2.90
2939 6557 0.601311 ACCTTCAGCTCTTGTCGCAC 60.601 55.000 0.00 0.00 0.00 5.34
2943 6561 5.646577 TTCTACTACCTTCAGCTCTTGTC 57.353 43.478 0.00 0.00 0.00 3.18
2944 6562 5.717178 TGATTCTACTACCTTCAGCTCTTGT 59.283 40.000 0.00 0.00 0.00 3.16
2963 6581 5.180868 ACTTGAGAAGTGTGAGCATTGATTC 59.819 40.000 0.00 0.00 41.01 2.52
2966 6584 4.077300 ACTTGAGAAGTGTGAGCATTGA 57.923 40.909 0.00 0.00 41.01 2.57
2978 6596 6.254589 CGCTACAGGATAAGAAACTTGAGAAG 59.745 42.308 0.00 0.00 0.00 2.85
2989 6607 2.108168 AGTTGGCGCTACAGGATAAGA 58.892 47.619 7.64 0.00 0.00 2.10
3146 6926 6.155827 GCATTGTGAGCATTGTTTAAACCTA 58.844 36.000 15.59 4.45 0.00 3.08
3354 7134 2.260639 ACACTGTGGATCCCTCTGAT 57.739 50.000 9.90 0.00 36.01 2.90
3363 7143 1.860641 TCCCGACATACACTGTGGAT 58.139 50.000 13.09 6.16 38.54 3.41
3529 7309 2.596346 ACAAACAGTCCATTCATGCCA 58.404 42.857 0.00 0.00 0.00 4.92
3632 7412 7.173907 TCTGCATTTTAGAACAAGGAGAGAAAG 59.826 37.037 0.00 0.00 0.00 2.62
3662 7443 3.669536 TGTCATCGTAAATGACCTGCAA 58.330 40.909 13.88 0.00 45.70 4.08
3698 7479 2.588620 GGTGACATACCCAAAACCACA 58.411 47.619 0.00 0.00 44.15 4.17
3798 7579 5.050295 GGCTCGTATTGAAGTATAAACCAGC 60.050 44.000 0.00 0.00 0.00 4.85
3799 7580 6.046593 TGGCTCGTATTGAAGTATAAACCAG 58.953 40.000 0.00 0.00 0.00 4.00
3802 7583 7.535489 AGTTGGCTCGTATTGAAGTATAAAC 57.465 36.000 0.00 0.00 0.00 2.01
3812 7612 3.869246 ACCGATTAAGTTGGCTCGTATTG 59.131 43.478 0.00 0.00 34.32 1.90
4039 7842 4.226384 AGGTCTGACACTGCCATATATCA 58.774 43.478 10.38 0.00 0.00 2.15
4086 7889 1.275291 GAACGGAGACCCAGATTGACA 59.725 52.381 0.00 0.00 0.00 3.58
4241 8044 2.283884 CGCCATTGTGACAAAACCAAAC 59.716 45.455 0.62 0.00 0.00 2.93
4426 8229 6.404074 GCCACATATATCTTCAATAGCCTTGC 60.404 42.308 0.00 0.00 0.00 4.01
4495 8298 7.279750 TGTATTTTCCCTAAACTGTGGTTTC 57.720 36.000 0.00 0.00 43.62 2.78
4515 8318 4.383118 GGCATGTCACTGTAGTTCCTGTAT 60.383 45.833 0.00 0.00 0.00 2.29
4646 8460 5.879223 ACAAACATGAGGTCTCAATCTCATC 59.121 40.000 0.00 0.00 45.68 2.92
4677 8491 3.558829 CGGTCTCAATCTCATGGATGTTG 59.441 47.826 0.00 0.00 34.45 3.33
4681 8495 1.764723 TGCGGTCTCAATCTCATGGAT 59.235 47.619 0.00 0.00 35.97 3.41
4739 8553 6.374333 TGAATACGAGGAAAAATGGAGGAAAG 59.626 38.462 0.00 0.00 0.00 2.62
4753 8567 8.786826 ATATGAAAACAGTTTGAATACGAGGA 57.213 30.769 0.00 0.00 0.00 3.71
4761 8576 6.899393 AGCCAGATATGAAAACAGTTTGAA 57.101 33.333 0.00 0.00 0.00 2.69
4853 8669 3.639561 AGGGAGTACAATTTTGGCGTTTT 59.360 39.130 0.00 0.00 0.00 2.43
4867 8683 1.109609 ATTCCGAACGGAGGGAGTAC 58.890 55.000 15.34 0.00 46.06 2.73
4868 8684 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
4869 8685 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
4870 8686 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
4871 8687 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
4872 8688 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
4873 8689 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
4874 8690 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
4875 8691 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
4876 8692 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
4877 8693 1.266211 CGCGACAAGTAATTCCGAACG 60.266 52.381 0.00 0.00 0.00 3.95
4878 8694 1.060122 CCGCGACAAGTAATTCCGAAC 59.940 52.381 8.23 0.00 0.00 3.95
4879 8695 1.067706 TCCGCGACAAGTAATTCCGAA 60.068 47.619 8.23 0.00 0.00 4.30
4880 8696 0.527113 TCCGCGACAAGTAATTCCGA 59.473 50.000 8.23 0.00 0.00 4.55
4881 8697 1.352114 TTCCGCGACAAGTAATTCCG 58.648 50.000 8.23 0.00 0.00 4.30
4882 8698 3.486875 CCATTTCCGCGACAAGTAATTCC 60.487 47.826 8.23 0.00 0.00 3.01
4883 8699 3.372822 TCCATTTCCGCGACAAGTAATTC 59.627 43.478 8.23 0.00 0.00 2.17
4884 8700 3.340034 TCCATTTCCGCGACAAGTAATT 58.660 40.909 8.23 0.00 0.00 1.40
4885 8701 2.980568 TCCATTTCCGCGACAAGTAAT 58.019 42.857 8.23 0.00 0.00 1.89
4886 8702 2.459060 TCCATTTCCGCGACAAGTAA 57.541 45.000 8.23 0.00 0.00 2.24
4887 8703 2.276201 CATCCATTTCCGCGACAAGTA 58.724 47.619 8.23 0.00 0.00 2.24
4888 8704 1.086696 CATCCATTTCCGCGACAAGT 58.913 50.000 8.23 0.00 0.00 3.16
4889 8705 1.086696 ACATCCATTTCCGCGACAAG 58.913 50.000 8.23 0.00 0.00 3.16
4890 8706 2.388310 TACATCCATTTCCGCGACAA 57.612 45.000 8.23 0.00 0.00 3.18
4891 8707 2.102420 AGATACATCCATTTCCGCGACA 59.898 45.455 8.23 0.00 0.00 4.35
4892 8708 2.755650 AGATACATCCATTTCCGCGAC 58.244 47.619 8.23 0.00 0.00 5.19
4893 8709 3.824443 TCTAGATACATCCATTTCCGCGA 59.176 43.478 8.23 0.00 0.00 5.87
4894 8710 3.921021 GTCTAGATACATCCATTTCCGCG 59.079 47.826 0.00 0.00 0.00 6.46
4895 8711 3.921021 CGTCTAGATACATCCATTTCCGC 59.079 47.826 0.00 0.00 0.00 5.54
4896 8712 5.122512 ACGTCTAGATACATCCATTTCCG 57.877 43.478 0.00 0.00 0.00 4.30
4897 8713 9.490379 AAAATACGTCTAGATACATCCATTTCC 57.510 33.333 0.00 0.00 0.00 3.13
4921 8737 9.749340 TCGGATATGGATGTATCTAGAACTAAA 57.251 33.333 0.00 0.00 32.78 1.85
4922 8738 9.397280 CTCGGATATGGATGTATCTAGAACTAA 57.603 37.037 0.00 0.00 32.78 2.24
4923 8739 8.769359 TCTCGGATATGGATGTATCTAGAACTA 58.231 37.037 0.00 0.00 32.78 2.24
4924 8740 7.554835 GTCTCGGATATGGATGTATCTAGAACT 59.445 40.741 0.00 0.00 31.35 3.01
4925 8741 7.337184 TGTCTCGGATATGGATGTATCTAGAAC 59.663 40.741 0.00 0.00 31.35 3.01
4926 8742 7.402862 TGTCTCGGATATGGATGTATCTAGAA 58.597 38.462 0.00 0.00 31.35 2.10
4927 8743 6.958767 TGTCTCGGATATGGATGTATCTAGA 58.041 40.000 0.00 0.00 32.78 2.43
4928 8744 7.338196 ACTTGTCTCGGATATGGATGTATCTAG 59.662 40.741 0.00 0.00 32.78 2.43
4929 8745 7.175797 ACTTGTCTCGGATATGGATGTATCTA 58.824 38.462 0.00 0.00 32.78 1.98
4930 8746 6.013379 ACTTGTCTCGGATATGGATGTATCT 58.987 40.000 0.00 0.00 32.78 1.98
4931 8747 6.274157 ACTTGTCTCGGATATGGATGTATC 57.726 41.667 0.00 0.00 0.00 2.24
4932 8748 7.776618 TTACTTGTCTCGGATATGGATGTAT 57.223 36.000 0.00 0.00 0.00 2.29
4933 8749 7.776618 ATTACTTGTCTCGGATATGGATGTA 57.223 36.000 0.00 0.00 0.00 2.29
4934 8750 6.672266 ATTACTTGTCTCGGATATGGATGT 57.328 37.500 0.00 0.00 0.00 3.06
4935 8751 6.591834 GGAATTACTTGTCTCGGATATGGATG 59.408 42.308 0.00 0.00 0.00 3.51
4936 8752 6.572509 CGGAATTACTTGTCTCGGATATGGAT 60.573 42.308 0.00 0.00 0.00 3.41
4937 8753 5.278808 CGGAATTACTTGTCTCGGATATGGA 60.279 44.000 0.00 0.00 0.00 3.41
4938 8754 4.923871 CGGAATTACTTGTCTCGGATATGG 59.076 45.833 0.00 0.00 0.00 2.74
4939 8755 5.769367 TCGGAATTACTTGTCTCGGATATG 58.231 41.667 0.00 0.00 0.00 1.78
4940 8756 6.401047 TTCGGAATTACTTGTCTCGGATAT 57.599 37.500 0.00 0.00 0.00 1.63
4941 8757 5.840243 TTCGGAATTACTTGTCTCGGATA 57.160 39.130 0.00 0.00 0.00 2.59
4942 8758 4.730949 TTCGGAATTACTTGTCTCGGAT 57.269 40.909 0.00 0.00 0.00 4.18
4943 8759 4.430007 CATTCGGAATTACTTGTCTCGGA 58.570 43.478 0.00 0.00 0.00 4.55
4944 8760 3.555956 CCATTCGGAATTACTTGTCTCGG 59.444 47.826 0.00 0.00 0.00 4.63
4945 8761 4.430007 TCCATTCGGAATTACTTGTCTCG 58.570 43.478 0.00 0.00 38.83 4.04
4946 8762 4.811557 CCTCCATTCGGAATTACTTGTCTC 59.188 45.833 0.00 0.00 42.21 3.36
4947 8763 4.384208 CCCTCCATTCGGAATTACTTGTCT 60.384 45.833 0.00 0.00 42.21 3.41
4948 8764 3.877508 CCCTCCATTCGGAATTACTTGTC 59.122 47.826 0.00 0.00 42.21 3.18
4949 8765 3.521937 TCCCTCCATTCGGAATTACTTGT 59.478 43.478 0.00 0.00 42.21 3.16
4950 8766 4.130118 CTCCCTCCATTCGGAATTACTTG 58.870 47.826 0.00 0.00 42.21 3.16
4951 8767 3.780850 ACTCCCTCCATTCGGAATTACTT 59.219 43.478 0.00 0.00 42.21 2.24
4952 8768 3.385115 ACTCCCTCCATTCGGAATTACT 58.615 45.455 0.00 0.00 42.21 2.24
4953 8769 3.840124 ACTCCCTCCATTCGGAATTAC 57.160 47.619 0.00 0.00 42.21 1.89
4954 8770 5.403512 AGATACTCCCTCCATTCGGAATTA 58.596 41.667 0.00 0.00 42.21 1.40
4955 8771 4.235372 AGATACTCCCTCCATTCGGAATT 58.765 43.478 0.00 0.00 42.21 2.17
4956 8772 3.863086 AGATACTCCCTCCATTCGGAAT 58.137 45.455 0.00 0.00 42.21 3.01
4957 8773 3.330126 AGATACTCCCTCCATTCGGAA 57.670 47.619 0.00 0.00 42.21 4.30
4958 8774 3.330126 AAGATACTCCCTCCATTCGGA 57.670 47.619 0.00 0.00 39.79 4.55
4959 8775 3.134804 ACAAAGATACTCCCTCCATTCGG 59.865 47.826 0.00 0.00 0.00 4.30
4960 8776 4.141937 TGACAAAGATACTCCCTCCATTCG 60.142 45.833 0.00 0.00 0.00 3.34
4961 8777 5.119694 GTGACAAAGATACTCCCTCCATTC 58.880 45.833 0.00 0.00 0.00 2.67
4962 8778 4.383118 CGTGACAAAGATACTCCCTCCATT 60.383 45.833 0.00 0.00 0.00 3.16
4963 8779 3.133003 CGTGACAAAGATACTCCCTCCAT 59.867 47.826 0.00 0.00 0.00 3.41
4964 8780 2.496070 CGTGACAAAGATACTCCCTCCA 59.504 50.000 0.00 0.00 0.00 3.86
4965 8781 2.738964 GCGTGACAAAGATACTCCCTCC 60.739 54.545 0.00 0.00 0.00 4.30
4966 8782 2.541556 GCGTGACAAAGATACTCCCTC 58.458 52.381 0.00 0.00 0.00 4.30
4967 8783 1.135083 CGCGTGACAAAGATACTCCCT 60.135 52.381 0.00 0.00 0.00 4.20
4968 8784 1.278238 CGCGTGACAAAGATACTCCC 58.722 55.000 0.00 0.00 0.00 4.30
4969 8785 0.645868 GCGCGTGACAAAGATACTCC 59.354 55.000 8.43 0.00 0.00 3.85
4970 8786 1.321743 CAGCGCGTGACAAAGATACTC 59.678 52.381 8.43 0.00 0.00 2.59
4971 8787 1.067846 TCAGCGCGTGACAAAGATACT 60.068 47.619 8.43 0.00 0.00 2.12
4972 8788 1.346365 TCAGCGCGTGACAAAGATAC 58.654 50.000 8.43 0.00 0.00 2.24
4986 8802 1.305930 GGGCCACCTAAGTTTCAGCG 61.306 60.000 4.39 0.00 0.00 5.18
5002 8818 1.768870 TCATAGAAACCAGCTAGGGGC 59.231 52.381 7.06 0.00 43.89 5.80
5017 8835 9.030452 AGTTAGTCCCTTTGCTATAGATCATAG 57.970 37.037 3.21 1.93 39.84 2.23
5042 9162 5.707298 TCTTTGGGATCAGTTAGAGCAAAAG 59.293 40.000 0.00 0.00 38.32 2.27
5085 9205 5.903198 TCAAAAATTGAGGGGTGGAAAAT 57.097 34.783 0.00 0.00 34.08 1.82
5105 9225 5.860941 TTTTTGCCAATACTTGTTCCTCA 57.139 34.783 0.00 0.00 0.00 3.86
5127 9247 7.734942 TGCCAATACTTTTCTCCTCAATTTTT 58.265 30.769 0.00 0.00 0.00 1.94
5128 9248 7.301868 TGCCAATACTTTTCTCCTCAATTTT 57.698 32.000 0.00 0.00 0.00 1.82
5129 9249 6.916360 TGCCAATACTTTTCTCCTCAATTT 57.084 33.333 0.00 0.00 0.00 1.82
5130 9250 6.916360 TTGCCAATACTTTTCTCCTCAATT 57.084 33.333 0.00 0.00 0.00 2.32
5131 9251 8.773033 ATATTGCCAATACTTTTCTCCTCAAT 57.227 30.769 0.00 0.00 0.00 2.57
5132 9252 8.593945 AATATTGCCAATACTTTTCTCCTCAA 57.406 30.769 0.00 0.00 0.00 3.02
5133 9253 9.693739 TTAATATTGCCAATACTTTTCTCCTCA 57.306 29.630 0.00 0.00 0.00 3.86
5135 9255 9.136323 CCTTAATATTGCCAATACTTTTCTCCT 57.864 33.333 0.00 0.00 0.00 3.69
5136 9256 9.131791 TCCTTAATATTGCCAATACTTTTCTCC 57.868 33.333 0.00 0.00 0.00 3.71
5137 9257 9.952188 GTCCTTAATATTGCCAATACTTTTCTC 57.048 33.333 0.00 0.00 0.00 2.87
5138 9258 9.474313 TGTCCTTAATATTGCCAATACTTTTCT 57.526 29.630 0.00 0.00 0.00 2.52
5139 9259 9.736023 CTGTCCTTAATATTGCCAATACTTTTC 57.264 33.333 0.00 0.00 0.00 2.29
5140 9260 9.255029 ACTGTCCTTAATATTGCCAATACTTTT 57.745 29.630 0.00 0.00 0.00 2.27
5141 9261 8.823220 ACTGTCCTTAATATTGCCAATACTTT 57.177 30.769 0.00 0.00 0.00 2.66
5142 9262 8.823220 AACTGTCCTTAATATTGCCAATACTT 57.177 30.769 0.00 0.00 0.00 2.24
5143 9263 8.823220 AAACTGTCCTTAATATTGCCAATACT 57.177 30.769 0.00 0.00 0.00 2.12
5144 9264 8.682710 TGAAACTGTCCTTAATATTGCCAATAC 58.317 33.333 0.00 0.00 0.00 1.89
5145 9265 8.815565 TGAAACTGTCCTTAATATTGCCAATA 57.184 30.769 0.00 0.00 0.00 1.90
5146 9266 7.716799 TGAAACTGTCCTTAATATTGCCAAT 57.283 32.000 0.00 0.00 0.00 3.16
5147 9267 7.716799 ATGAAACTGTCCTTAATATTGCCAA 57.283 32.000 0.00 0.00 0.00 4.52
5148 9268 7.013274 GCTATGAAACTGTCCTTAATATTGCCA 59.987 37.037 0.00 0.00 0.00 4.92
5149 9269 7.229506 AGCTATGAAACTGTCCTTAATATTGCC 59.770 37.037 0.00 0.00 0.00 4.52
5150 9270 8.159344 AGCTATGAAACTGTCCTTAATATTGC 57.841 34.615 0.00 0.00 0.00 3.56
5167 9287 5.760253 GGCTGTAGATGCTTTAAGCTATGAA 59.240 40.000 18.20 0.00 42.97 2.57
5172 9292 2.555199 CGGCTGTAGATGCTTTAAGCT 58.445 47.619 18.20 3.65 42.97 3.74
5195 9315 2.262637 TGAGGGGTCGGATTTAGTGTT 58.737 47.619 0.00 0.00 0.00 3.32
5200 9320 2.650322 GCATTTGAGGGGTCGGATTTA 58.350 47.619 0.00 0.00 0.00 1.40
5208 9328 3.944250 CTGCGGGCATTTGAGGGGT 62.944 63.158 0.00 0.00 0.00 4.95
5209 9329 2.916527 ATCTGCGGGCATTTGAGGGG 62.917 60.000 0.00 0.00 0.00 4.79
5225 9345 0.109342 GGATTCATCCGGGCACATCT 59.891 55.000 0.00 0.00 37.19 2.90
5238 9358 1.003839 GTCACTGCCCGTGGATTCA 60.004 57.895 3.75 0.00 43.94 2.57
5298 9422 4.744237 CATGGATTTGGGGGTTCAGATAT 58.256 43.478 0.00 0.00 0.00 1.63
5333 9457 4.514781 AAGTGTGTTCATCTACGTAGCA 57.485 40.909 18.00 6.73 0.00 3.49
5367 9817 5.531122 TTGTATCGGAGGGATTTAGTCTG 57.469 43.478 0.00 0.00 36.55 3.51
5377 9827 2.917933 TGATGCTTTTGTATCGGAGGG 58.082 47.619 0.00 0.00 43.21 4.30
5408 9858 4.884744 TCAAACTTTGATCCTTTTGTCCGA 59.115 37.500 0.00 0.00 34.08 4.55
5429 9879 2.557924 GGATTTGCACTGTCCAACATCA 59.442 45.455 6.38 0.00 32.23 3.07
5434 9884 4.032960 AGTATGGATTTGCACTGTCCAA 57.967 40.909 15.50 5.44 44.55 3.53
5435 9885 3.719268 AGTATGGATTTGCACTGTCCA 57.281 42.857 14.28 14.28 45.37 4.02
5436 9886 6.509418 TTTTAGTATGGATTTGCACTGTCC 57.491 37.500 4.62 4.62 0.00 4.02
5437 9887 7.593825 AGTTTTTAGTATGGATTTGCACTGTC 58.406 34.615 0.00 0.00 0.00 3.51
5438 9888 7.524717 AGTTTTTAGTATGGATTTGCACTGT 57.475 32.000 0.00 0.00 0.00 3.55
5439 9889 8.511321 TGTAGTTTTTAGTATGGATTTGCACTG 58.489 33.333 0.00 0.00 0.00 3.66
5440 9890 8.630054 TGTAGTTTTTAGTATGGATTTGCACT 57.370 30.769 0.00 0.00 0.00 4.40
5441 9891 9.685828 TTTGTAGTTTTTAGTATGGATTTGCAC 57.314 29.630 0.00 0.00 0.00 4.57
5468 9918 5.357032 CGCCCTTCTTAGTTTATCCATGTTT 59.643 40.000 0.00 0.00 0.00 2.83
5481 9931 2.170607 TGATTTCCTCCGCCCTTCTTAG 59.829 50.000 0.00 0.00 0.00 2.18
5482 9932 2.093128 GTGATTTCCTCCGCCCTTCTTA 60.093 50.000 0.00 0.00 0.00 2.10
5483 9933 0.991920 TGATTTCCTCCGCCCTTCTT 59.008 50.000 0.00 0.00 0.00 2.52
5485 9935 0.748367 GGTGATTTCCTCCGCCCTTC 60.748 60.000 0.00 0.00 0.00 3.46
5497 9948 2.029110 CACGGCAAGGAAATGGTGATTT 60.029 45.455 0.00 0.00 34.29 2.17
5554 10005 0.255890 ATGCCAACGCCTACAAGGAT 59.744 50.000 0.00 0.00 37.67 3.24
5556 10007 1.376609 GGATGCCAACGCCTACAAGG 61.377 60.000 0.00 0.00 38.80 3.61
5558 10009 1.743623 CGGATGCCAACGCCTACAA 60.744 57.895 0.00 0.00 0.00 2.41
5568 10019 0.457166 CTCGAACGTAACGGATGCCA 60.457 55.000 13.45 0.00 0.00 4.92
5569 10020 0.457337 ACTCGAACGTAACGGATGCC 60.457 55.000 13.45 0.00 0.00 4.40
5570 10021 0.912528 GACTCGAACGTAACGGATGC 59.087 55.000 13.45 0.00 0.00 3.91
5571 10022 1.177668 CGACTCGAACGTAACGGATG 58.822 55.000 13.45 8.04 0.00 3.51
5572 10023 0.798776 ACGACTCGAACGTAACGGAT 59.201 50.000 14.08 4.15 42.17 4.18
5573 10024 0.586319 AACGACTCGAACGTAACGGA 59.414 50.000 15.58 0.00 43.16 4.69
5574 10025 0.699151 CAACGACTCGAACGTAACGG 59.301 55.000 15.58 8.06 43.16 4.44
5575 10026 1.376856 GACAACGACTCGAACGTAACG 59.623 52.381 15.58 8.43 43.16 3.18
5576 10027 1.376856 CGACAACGACTCGAACGTAAC 59.623 52.381 15.58 10.08 43.16 2.50
5577 10028 1.260297 TCGACAACGACTCGAACGTAA 59.740 47.619 15.58 0.76 43.81 3.18
5578 10029 0.858583 TCGACAACGACTCGAACGTA 59.141 50.000 15.58 0.24 43.81 3.57
5579 10030 1.643292 TCGACAACGACTCGAACGT 59.357 52.632 5.20 10.72 43.81 3.99
5580 10031 4.502335 TCGACAACGACTCGAACG 57.498 55.556 5.20 9.55 43.81 3.95
5589 10040 1.673760 CCAAATGTGCTTCGACAACG 58.326 50.000 0.00 0.00 41.26 4.10
5590 10041 1.408422 GCCAAATGTGCTTCGACAAC 58.592 50.000 0.00 0.00 0.00 3.32
5591 10042 0.313672 GGCCAAATGTGCTTCGACAA 59.686 50.000 0.00 0.00 0.00 3.18
5592 10043 1.523154 GGGCCAAATGTGCTTCGACA 61.523 55.000 4.39 0.00 0.00 4.35
5593 10044 1.212751 GGGCCAAATGTGCTTCGAC 59.787 57.895 4.39 0.00 0.00 4.20
5594 10045 0.611618 ATGGGCCAAATGTGCTTCGA 60.612 50.000 11.89 0.00 0.00 3.71
5595 10046 0.179129 GATGGGCCAAATGTGCTTCG 60.179 55.000 11.89 0.00 0.00 3.79
5596 10047 0.179129 CGATGGGCCAAATGTGCTTC 60.179 55.000 11.89 0.00 0.00 3.86
5597 10048 1.606885 CCGATGGGCCAAATGTGCTT 61.607 55.000 11.89 0.00 0.00 3.91
5598 10049 2.053865 CCGATGGGCCAAATGTGCT 61.054 57.895 11.89 0.00 0.00 4.40
5599 10050 2.495866 CCGATGGGCCAAATGTGC 59.504 61.111 11.89 0.00 0.00 4.57
5610 10061 3.643595 TTGCTCCCAAGGCCGATGG 62.644 63.158 20.40 20.40 37.71 3.51
5611 10062 2.045045 TTGCTCCCAAGGCCGATG 60.045 61.111 0.00 0.00 0.00 3.84
5612 10063 2.273449 CTTGCTCCCAAGGCCGAT 59.727 61.111 0.00 0.00 43.75 4.18
5613 10064 4.722700 GCTTGCTCCCAAGGCCGA 62.723 66.667 0.00 0.00 46.77 5.54
5617 10068 2.747855 GACCGCTTGCTCCCAAGG 60.748 66.667 5.68 0.00 46.77 3.61
5619 10070 1.916273 TAGGACCGCTTGCTCCCAA 60.916 57.895 0.00 0.00 0.00 4.12
5620 10071 2.284331 TAGGACCGCTTGCTCCCA 60.284 61.111 0.00 0.00 0.00 4.37
5621 10072 2.187163 GTAGGACCGCTTGCTCCC 59.813 66.667 0.00 0.00 0.00 4.30
5622 10073 1.142097 GAGTAGGACCGCTTGCTCC 59.858 63.158 0.00 0.00 28.68 4.70
5623 10074 1.142097 GGAGTAGGACCGCTTGCTC 59.858 63.158 0.00 0.00 33.15 4.26
5624 10075 0.905337 AAGGAGTAGGACCGCTTGCT 60.905 55.000 0.00 0.00 0.00 3.91
5625 10076 0.460459 GAAGGAGTAGGACCGCTTGC 60.460 60.000 0.00 0.00 0.00 4.01
5626 10077 0.179134 CGAAGGAGTAGGACCGCTTG 60.179 60.000 0.00 0.00 0.00 4.01
5627 10078 1.946475 GCGAAGGAGTAGGACCGCTT 61.946 60.000 0.00 0.00 39.57 4.68
5628 10079 2.416432 GCGAAGGAGTAGGACCGCT 61.416 63.158 0.00 0.00 39.57 5.52
5629 10080 2.017559 ATGCGAAGGAGTAGGACCGC 62.018 60.000 0.00 0.00 42.52 5.68
5630 10081 0.030908 GATGCGAAGGAGTAGGACCG 59.969 60.000 0.00 0.00 0.00 4.79
5631 10082 0.389757 GGATGCGAAGGAGTAGGACC 59.610 60.000 0.00 0.00 0.00 4.46
5632 10083 1.067821 CAGGATGCGAAGGAGTAGGAC 59.932 57.143 0.00 0.00 0.00 3.85
5633 10084 1.403814 CAGGATGCGAAGGAGTAGGA 58.596 55.000 0.00 0.00 0.00 2.94
5634 10085 0.390860 CCAGGATGCGAAGGAGTAGG 59.609 60.000 0.00 0.00 31.97 3.18
5635 10086 0.390860 CCCAGGATGCGAAGGAGTAG 59.609 60.000 0.00 0.00 31.97 2.57
5636 10087 1.686325 GCCCAGGATGCGAAGGAGTA 61.686 60.000 0.00 0.00 31.97 2.59
5637 10088 3.036429 GCCCAGGATGCGAAGGAGT 62.036 63.158 0.00 0.00 31.97 3.85
5638 10089 2.203126 GCCCAGGATGCGAAGGAG 60.203 66.667 0.00 0.00 31.97 3.69
5639 10090 3.797353 GGCCCAGGATGCGAAGGA 61.797 66.667 0.00 0.00 31.97 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.