Multiple sequence alignment - TraesCS5A01G072400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G072400 chr5A 100.000 6488 0 0 1 6488 83546828 83540341 0.000000e+00 11982.0
1 TraesCS5A01G072400 chr5A 94.388 1176 62 4 5184 6357 561611387 561610214 0.000000e+00 1803.0
2 TraesCS5A01G072400 chr5A 94.228 1178 63 4 5184 6357 319467261 319466085 0.000000e+00 1794.0
3 TraesCS5A01G072400 chr5A 94.293 1174 61 6 5181 6351 98549869 98551039 0.000000e+00 1792.0
4 TraesCS5A01G072400 chr5A 94.218 1176 62 6 5184 6357 195700936 195699765 0.000000e+00 1790.0
5 TraesCS5A01G072400 chr5A 94.471 850 19 9 3060 3882 299776895 299777743 0.000000e+00 1284.0
6 TraesCS5A01G072400 chr5A 94.005 834 22 3 3074 3880 47459066 47458234 0.000000e+00 1238.0
7 TraesCS5A01G072400 chr5A 84.832 745 71 21 4474 5183 94904842 94904105 0.000000e+00 712.0
8 TraesCS5A01G072400 chr5A 96.045 177 7 0 19 195 319467503 319467327 8.230000e-74 289.0
9 TraesCS5A01G072400 chr5A 98.561 139 2 0 6350 6488 650394359 650394221 5.020000e-61 246.0
10 TraesCS5A01G072400 chr5A 89.888 178 18 0 3683 3860 473333736 473333913 5.060000e-56 230.0
11 TraesCS5A01G072400 chr5A 100.000 36 0 0 3881 3916 517911766 517911731 4.200000e-07 67.6
12 TraesCS5A01G072400 chr7A 94.218 1176 64 4 5184 6357 460409831 460408658 0.000000e+00 1792.0
13 TraesCS5A01G072400 chr7A 94.378 836 29 3 3062 3880 24387195 24386361 0.000000e+00 1267.0
14 TraesCS5A01G072400 chr7A 94.378 836 29 3 3062 3880 24407817 24406983 0.000000e+00 1267.0
15 TraesCS5A01G072400 chr7A 94.090 846 18 11 3062 3880 491827685 491828525 0.000000e+00 1256.0
16 TraesCS5A01G072400 chr7A 93.548 806 20 11 3061 3839 600552790 600551990 0.000000e+00 1171.0
17 TraesCS5A01G072400 chr7A 86.475 695 59 11 2265 2947 699254953 699254282 0.000000e+00 730.0
18 TraesCS5A01G072400 chr7A 91.455 433 36 1 4751 5183 699251820 699251389 1.560000e-165 593.0
19 TraesCS5A01G072400 chr7A 80.688 523 54 25 919 1425 699255765 699255274 4.780000e-96 363.0
20 TraesCS5A01G072400 chr7A 76.912 719 112 37 4497 5183 13604105 13603409 6.190000e-95 359.0
21 TraesCS5A01G072400 chr7A 96.067 178 7 0 19 196 484329159 484329336 2.290000e-74 291.0
22 TraesCS5A01G072400 chr7A 96.045 177 7 0 19 195 93691413 93691237 8.230000e-74 289.0
23 TraesCS5A01G072400 chr7A 86.364 242 24 5 3948 4184 699253375 699253138 8.350000e-64 255.0
24 TraesCS5A01G072400 chr7A 88.372 215 20 5 2355 2565 80131569 80131356 3.000000e-63 254.0
25 TraesCS5A01G072400 chr7A 99.270 137 1 0 6351 6487 9143498 9143362 1.400000e-61 248.0
26 TraesCS5A01G072400 chr7A 99.270 137 1 0 6352 6488 353788956 353789092 1.400000e-61 248.0
27 TraesCS5A01G072400 chr7A 91.447 152 13 0 1496 1647 699255180 699255029 6.590000e-50 209.0
28 TraesCS5A01G072400 chr7A 88.158 76 4 1 4196 4271 112377373 112377303 1.160000e-12 86.1
29 TraesCS5A01G072400 chr2A 94.435 1168 60 5 5184 6349 210538637 210537473 0.000000e+00 1792.0
30 TraesCS5A01G072400 chr2A 84.430 745 74 20 4474 5183 140564657 140563920 0.000000e+00 695.0
31 TraesCS5A01G072400 chr2A 92.079 202 10 6 19 215 592257323 592257123 4.950000e-71 279.0
32 TraesCS5A01G072400 chr2A 90.674 193 13 2 19 211 642316547 642316360 1.080000e-62 252.0
33 TraesCS5A01G072400 chr2A 99.270 137 1 0 6352 6488 516979677 516979813 1.400000e-61 248.0
34 TraesCS5A01G072400 chr2A 99.270 137 1 0 6352 6488 656211244 656211108 1.400000e-61 248.0
35 TraesCS5A01G072400 chr2A 92.486 173 11 2 40 211 159211482 159211311 5.020000e-61 246.0
36 TraesCS5A01G072400 chr2A 88.144 194 15 8 19 206 360572786 360572595 2.350000e-54 224.0
37 TraesCS5A01G072400 chr2A 84.746 236 23 7 1151 1373 685208677 685208442 2.350000e-54 224.0
38 TraesCS5A01G072400 chr2A 86.408 206 20 8 19 217 586565479 586565275 1.100000e-52 219.0
39 TraesCS5A01G072400 chr2A 87.000 200 15 11 19 211 402292408 402292213 1.420000e-51 215.0
40 TraesCS5A01G072400 chr2A 83.898 236 25 7 1151 1373 140576336 140576101 5.100000e-51 213.0
41 TraesCS5A01G072400 chr2A 86.500 200 16 11 19 211 404223775 404223580 6.590000e-50 209.0
42 TraesCS5A01G072400 chr2A 75.593 295 36 17 4187 4454 140574172 140573887 5.320000e-21 113.0
43 TraesCS5A01G072400 chr2A 80.124 161 20 10 4476 4627 40958933 40958776 6.880000e-20 110.0
44 TraesCS5A01G072400 chr1A 94.359 1170 61 5 5184 6350 506644377 506645544 0.000000e+00 1790.0
45 TraesCS5A01G072400 chr1A 94.274 1170 62 5 5184 6351 277085914 277087080 0.000000e+00 1784.0
46 TraesCS5A01G072400 chr1A 96.041 1061 36 2 585 1642 9747625 9746568 0.000000e+00 1722.0
47 TraesCS5A01G072400 chr1A 94.222 848 21 9 3061 3881 251337308 251338154 0.000000e+00 1269.0
48 TraesCS5A01G072400 chr1A 92.703 836 19 13 3074 3880 452758720 452757898 0.000000e+00 1168.0
49 TraesCS5A01G072400 chr1A 86.464 591 59 15 2480 3064 266692823 266692248 4.270000e-176 628.0
50 TraesCS5A01G072400 chr1A 93.968 315 18 1 279 592 9755260 9754946 5.890000e-130 475.0
51 TraesCS5A01G072400 chr1A 93.750 192 10 2 21 211 96127847 96128037 2.960000e-73 287.0
52 TraesCS5A01G072400 chr1A 79.065 449 51 15 213 642 272197962 272198386 1.070000e-67 268.0
53 TraesCS5A01G072400 chr1A 99.270 137 1 0 6352 6488 462993279 462993143 1.400000e-61 248.0
54 TraesCS5A01G072400 chr7D 94.053 1177 65 5 5184 6357 397628258 397627084 0.000000e+00 1781.0
55 TraesCS5A01G072400 chr7D 92.166 817 44 8 3074 3880 412157289 412158095 0.000000e+00 1136.0
56 TraesCS5A01G072400 chr7D 94.891 137 6 1 1658 1793 446944495 446944359 5.100000e-51 213.0
57 TraesCS5A01G072400 chr3D 94.258 836 28 8 3061 3880 338919713 338920544 0.000000e+00 1260.0
58 TraesCS5A01G072400 chr3D 79.874 159 22 7 4476 4627 36550235 36550080 2.470000e-19 108.0
59 TraesCS5A01G072400 chr5B 93.491 845 26 13 3062 3880 656908590 656907749 0.000000e+00 1229.0
60 TraesCS5A01G072400 chr5B 82.884 742 88 16 4477 5183 19025143 19024406 1.190000e-176 630.0
61 TraesCS5A01G072400 chr5B 92.262 168 13 0 3693 3860 440029529 440029696 8.410000e-59 239.0
62 TraesCS5A01G072400 chr5B 94.030 67 3 1 1732 1797 87768539 87768473 4.140000e-17 100.0
63 TraesCS5A01G072400 chr5B 88.158 76 4 1 4196 4271 356828303 356828233 1.160000e-12 86.1
64 TraesCS5A01G072400 chr1D 93.262 846 27 14 3062 3880 79117210 79118052 0.000000e+00 1219.0
65 TraesCS5A01G072400 chr1D 83.125 320 34 10 1123 1425 326985153 326984837 2.300000e-69 274.0
66 TraesCS5A01G072400 chr1D 86.111 144 15 4 1668 1807 22507358 22507216 4.050000e-32 150.0
67 TraesCS5A01G072400 chr1D 79.866 149 22 4 1650 1797 348707680 348707539 1.150000e-17 102.0
68 TraesCS5A01G072400 chr5D 93.833 827 19 5 3062 3857 549893037 549893862 0.000000e+00 1216.0
69 TraesCS5A01G072400 chr5D 83.737 744 79 16 4474 5183 149475730 149474995 0.000000e+00 665.0
70 TraesCS5A01G072400 chr3A 93.075 852 25 9 3059 3880 170979902 170979055 0.000000e+00 1216.0
71 TraesCS5A01G072400 chr3A 85.369 745 67 21 4474 5183 703993525 703994262 0.000000e+00 734.0
72 TraesCS5A01G072400 chr3A 80.965 746 84 22 4474 5183 54141835 54142558 7.400000e-149 538.0
73 TraesCS5A01G072400 chr3A 81.754 570 70 13 4637 5183 730974082 730974640 4.620000e-121 446.0
74 TraesCS5A01G072400 chr3A 96.067 178 7 0 19 196 222541598 222541775 2.290000e-74 291.0
75 TraesCS5A01G072400 chr3A 99.270 137 1 0 6352 6488 715705789 715705653 1.400000e-61 248.0
76 TraesCS5A01G072400 chr3A 98.561 139 2 0 6350 6488 614076004 614076142 5.020000e-61 246.0
77 TraesCS5A01G072400 chr3A 96.026 151 4 2 6340 6488 528927521 528927371 1.810000e-60 244.0
78 TraesCS5A01G072400 chr3A 82.627 236 28 7 1151 1373 703991445 703991680 5.130000e-46 196.0
79 TraesCS5A01G072400 chr3A 86.555 119 14 1 1531 1647 54140490 54140608 5.280000e-26 130.0
80 TraesCS5A01G072400 chr3A 93.750 64 4 0 210 273 357349529 357349466 5.350000e-16 97.1
81 TraesCS5A01G072400 chr3A 87.342 79 5 1 4193 4271 130265694 130265767 1.160000e-12 86.1
82 TraesCS5A01G072400 chr4A 84.223 1293 130 40 1793 3064 630211101 630212340 0.000000e+00 1190.0
83 TraesCS5A01G072400 chr4A 86.230 443 47 10 2480 2918 312110294 312109862 9.850000e-128 468.0
84 TraesCS5A01G072400 chr4A 84.424 443 51 10 4750 5183 373810088 373810521 2.800000e-113 420.0
85 TraesCS5A01G072400 chr4A 96.067 178 7 0 19 196 141790736 141790559 2.290000e-74 291.0
86 TraesCS5A01G072400 chr4A 96.045 177 7 0 19 195 137737823 137737647 8.230000e-74 289.0
87 TraesCS5A01G072400 chr4A 77.586 522 66 27 922 1425 312111305 312110817 1.070000e-67 268.0
88 TraesCS5A01G072400 chr4A 98.039 51 1 0 210 260 300979611 300979561 8.960000e-14 89.8
89 TraesCS5A01G072400 chr4A 88.158 76 4 1 4196 4271 1667108 1667038 1.160000e-12 86.1
90 TraesCS5A01G072400 chr4A 87.342 79 5 1 4193 4271 129685398 129685471 1.160000e-12 86.1
91 TraesCS5A01G072400 chr4A 87.342 79 5 1 4193 4271 235867165 235867238 1.160000e-12 86.1
92 TraesCS5A01G072400 chr4A 94.340 53 3 0 3881 3933 630212329 630212381 1.500000e-11 82.4
93 TraesCS5A01G072400 chr4A 86.842 76 5 3 4196 4271 712017601 712017531 5.390000e-11 80.5
94 TraesCS5A01G072400 chr6A 83.617 1294 128 44 1793 3064 493377990 493376759 0.000000e+00 1138.0
95 TraesCS5A01G072400 chr6A 94.301 193 11 0 19 211 376215081 376215273 4.920000e-76 296.0
96 TraesCS5A01G072400 chr6A 87.179 78 10 0 209 286 575587252 575587329 8.960000e-14 89.8
97 TraesCS5A01G072400 chr6A 94.340 53 3 0 3881 3933 493376770 493376718 1.500000e-11 82.4
98 TraesCS5A01G072400 chr4B 86.998 846 72 19 1911 2742 623727184 623726363 0.000000e+00 918.0
99 TraesCS5A01G072400 chr4B 83.025 972 117 26 4252 5183 623725479 623724516 0.000000e+00 837.0
100 TraesCS5A01G072400 chr4B 84.966 745 70 21 4474 5183 90148731 90147994 0.000000e+00 717.0
101 TraesCS5A01G072400 chr4B 81.802 566 81 12 4633 5183 144305321 144305879 7.670000e-124 455.0
102 TraesCS5A01G072400 chr4B 87.574 169 20 1 1479 1647 90150383 90150216 1.850000e-45 195.0
103 TraesCS5A01G072400 chr4B 92.157 51 4 0 4189 4239 623725561 623725511 9.020000e-09 73.1
104 TraesCS5A01G072400 chr7B 83.288 742 85 16 4477 5183 66181902 66181165 0.000000e+00 647.0
105 TraesCS5A01G072400 chr7B 95.745 47 2 0 210 256 655018438 655018484 6.980000e-10 76.8
106 TraesCS5A01G072400 chr1B 82.615 742 90 16 4477 5183 622548255 622547518 2.570000e-173 619.0
107 TraesCS5A01G072400 chr1B 88.564 411 14 12 3503 3880 97370685 97371095 9.850000e-128 468.0
108 TraesCS5A01G072400 chr1B 80.363 331 38 15 1119 1425 441669720 441669393 6.550000e-55 226.0
109 TraesCS5A01G072400 chr1B 86.620 142 14 4 1669 1807 38582291 38582152 1.130000e-32 152.0
110 TraesCS5A01G072400 chr1B 87.342 79 5 1 4193 4271 411549811 411549884 1.160000e-12 86.1
111 TraesCS5A01G072400 chr1B 86.842 76 5 1 4196 4271 404393136 404393066 5.390000e-11 80.5
112 TraesCS5A01G072400 chr1B 94.118 51 3 0 210 260 548615864 548615814 1.940000e-10 78.7
113 TraesCS5A01G072400 chr6B 81.503 519 57 19 4474 4957 713646782 713647296 2.190000e-104 390.0
114 TraesCS5A01G072400 chr6B 96.078 51 2 0 210 260 565747959 565748009 4.170000e-12 84.2
115 TraesCS5A01G072400 chr2D 89.474 76 8 0 211 286 296694139 296694064 5.350000e-16 97.1
116 TraesCS5A01G072400 chr6D 84.211 95 10 2 4474 4568 1547416 1547327 3.220000e-13 87.9
117 TraesCS5A01G072400 chr4D 96.078 51 2 0 210 260 143450634 143450684 4.170000e-12 84.2
118 TraesCS5A01G072400 chr3B 87.838 74 4 1 4196 4269 27808866 27808798 1.500000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G072400 chr5A 83540341 83546828 6487 True 11982.000000 11982 100.000000 1 6488 1 chr5A.!!$R2 6487
1 TraesCS5A01G072400 chr5A 561610214 561611387 1173 True 1803.000000 1803 94.388000 5184 6357 1 chr5A.!!$R6 1173
2 TraesCS5A01G072400 chr5A 98549869 98551039 1170 False 1792.000000 1792 94.293000 5181 6351 1 chr5A.!!$F1 1170
3 TraesCS5A01G072400 chr5A 195699765 195700936 1171 True 1790.000000 1790 94.218000 5184 6357 1 chr5A.!!$R4 1173
4 TraesCS5A01G072400 chr5A 299776895 299777743 848 False 1284.000000 1284 94.471000 3060 3882 1 chr5A.!!$F2 822
5 TraesCS5A01G072400 chr5A 47458234 47459066 832 True 1238.000000 1238 94.005000 3074 3880 1 chr5A.!!$R1 806
6 TraesCS5A01G072400 chr5A 319466085 319467503 1418 True 1041.500000 1794 95.136500 19 6357 2 chr5A.!!$R8 6338
7 TraesCS5A01G072400 chr5A 94904105 94904842 737 True 712.000000 712 84.832000 4474 5183 1 chr5A.!!$R3 709
8 TraesCS5A01G072400 chr7A 460408658 460409831 1173 True 1792.000000 1792 94.218000 5184 6357 1 chr7A.!!$R8 1173
9 TraesCS5A01G072400 chr7A 24386361 24387195 834 True 1267.000000 1267 94.378000 3062 3880 1 chr7A.!!$R3 818
10 TraesCS5A01G072400 chr7A 24406983 24407817 834 True 1267.000000 1267 94.378000 3062 3880 1 chr7A.!!$R4 818
11 TraesCS5A01G072400 chr7A 491827685 491828525 840 False 1256.000000 1256 94.090000 3062 3880 1 chr7A.!!$F3 818
12 TraesCS5A01G072400 chr7A 600551990 600552790 800 True 1171.000000 1171 93.548000 3061 3839 1 chr7A.!!$R9 778
13 TraesCS5A01G072400 chr7A 699251389 699255765 4376 True 430.000000 730 87.285800 919 5183 5 chr7A.!!$R10 4264
14 TraesCS5A01G072400 chr7A 13603409 13604105 696 True 359.000000 359 76.912000 4497 5183 1 chr7A.!!$R2 686
15 TraesCS5A01G072400 chr2A 210537473 210538637 1164 True 1792.000000 1792 94.435000 5184 6349 1 chr2A.!!$R4 1165
16 TraesCS5A01G072400 chr2A 140563920 140564657 737 True 695.000000 695 84.430000 4474 5183 1 chr2A.!!$R2 709
17 TraesCS5A01G072400 chr1A 506644377 506645544 1167 False 1790.000000 1790 94.359000 5184 6350 1 chr1A.!!$F5 1166
18 TraesCS5A01G072400 chr1A 277085914 277087080 1166 False 1784.000000 1784 94.274000 5184 6351 1 chr1A.!!$F4 1167
19 TraesCS5A01G072400 chr1A 9746568 9747625 1057 True 1722.000000 1722 96.041000 585 1642 1 chr1A.!!$R1 1057
20 TraesCS5A01G072400 chr1A 251337308 251338154 846 False 1269.000000 1269 94.222000 3061 3881 1 chr1A.!!$F2 820
21 TraesCS5A01G072400 chr1A 452757898 452758720 822 True 1168.000000 1168 92.703000 3074 3880 1 chr1A.!!$R4 806
22 TraesCS5A01G072400 chr1A 266692248 266692823 575 True 628.000000 628 86.464000 2480 3064 1 chr1A.!!$R3 584
23 TraesCS5A01G072400 chr7D 397627084 397628258 1174 True 1781.000000 1781 94.053000 5184 6357 1 chr7D.!!$R1 1173
24 TraesCS5A01G072400 chr7D 412157289 412158095 806 False 1136.000000 1136 92.166000 3074 3880 1 chr7D.!!$F1 806
25 TraesCS5A01G072400 chr3D 338919713 338920544 831 False 1260.000000 1260 94.258000 3061 3880 1 chr3D.!!$F1 819
26 TraesCS5A01G072400 chr5B 656907749 656908590 841 True 1229.000000 1229 93.491000 3062 3880 1 chr5B.!!$R4 818
27 TraesCS5A01G072400 chr5B 19024406 19025143 737 True 630.000000 630 82.884000 4477 5183 1 chr5B.!!$R1 706
28 TraesCS5A01G072400 chr1D 79117210 79118052 842 False 1219.000000 1219 93.262000 3062 3880 1 chr1D.!!$F1 818
29 TraesCS5A01G072400 chr5D 549893037 549893862 825 False 1216.000000 1216 93.833000 3062 3857 1 chr5D.!!$F1 795
30 TraesCS5A01G072400 chr5D 149474995 149475730 735 True 665.000000 665 83.737000 4474 5183 1 chr5D.!!$R1 709
31 TraesCS5A01G072400 chr3A 170979055 170979902 847 True 1216.000000 1216 93.075000 3059 3880 1 chr3A.!!$R1 821
32 TraesCS5A01G072400 chr3A 703991445 703994262 2817 False 465.000000 734 83.998000 1151 5183 2 chr3A.!!$F6 4032
33 TraesCS5A01G072400 chr3A 730974082 730974640 558 False 446.000000 446 81.754000 4637 5183 1 chr3A.!!$F4 546
34 TraesCS5A01G072400 chr3A 54140490 54142558 2068 False 334.000000 538 83.760000 1531 5183 2 chr3A.!!$F5 3652
35 TraesCS5A01G072400 chr4A 630211101 630212381 1280 False 636.200000 1190 89.281500 1793 3933 2 chr4A.!!$F4 2140
36 TraesCS5A01G072400 chr4A 312109862 312111305 1443 True 368.000000 468 81.908000 922 2918 2 chr4A.!!$R6 1996
37 TraesCS5A01G072400 chr6A 493376718 493377990 1272 True 610.200000 1138 88.978500 1793 3933 2 chr6A.!!$R1 2140
38 TraesCS5A01G072400 chr4B 623724516 623727184 2668 True 609.366667 918 87.393333 1911 5183 3 chr4B.!!$R2 3272
39 TraesCS5A01G072400 chr4B 90147994 90150383 2389 True 456.000000 717 86.270000 1479 5183 2 chr4B.!!$R1 3704
40 TraesCS5A01G072400 chr4B 144305321 144305879 558 False 455.000000 455 81.802000 4633 5183 1 chr4B.!!$F1 550
41 TraesCS5A01G072400 chr7B 66181165 66181902 737 True 647.000000 647 83.288000 4477 5183 1 chr7B.!!$R1 706
42 TraesCS5A01G072400 chr1B 622547518 622548255 737 True 619.000000 619 82.615000 4477 5183 1 chr1B.!!$R5 706
43 TraesCS5A01G072400 chr6B 713646782 713647296 514 False 390.000000 390 81.503000 4474 4957 1 chr6B.!!$F2 483

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
417 418 0.030908 CTAATCTGCCGAGGACCGTC 59.969 60.0 0.00 0.00 36.31 4.79 F
1676 1906 0.107945 GCTTCTAGCCCAGTGGTCAG 60.108 60.0 8.74 1.99 34.48 3.51 F
1736 1966 0.099791 GGCTCGTACTCTGCTGTCTC 59.900 60.0 0.00 0.00 0.00 3.36 F
1935 2173 0.239347 GTTGTGCACTTGGCTAGCTG 59.761 55.0 19.41 5.97 45.15 4.24 F
2888 3367 0.318120 CCGTGGCAAAAGCAGGAATT 59.682 50.0 0.00 0.00 0.00 2.17 F
4272 6303 0.033090 TGTCTCAGTGTGAGCAGCTG 59.967 55.0 10.11 10.11 43.95 4.24 F
4340 6398 0.250901 GCCAGAGAGGGTTGCAGAAA 60.251 55.0 0.00 0.00 38.09 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1717 1947 0.099791 GAGACAGCAGAGTACGAGCC 59.900 60.000 0.00 0.0 0.00 4.70 R
3615 4847 0.396278 CTGGCCCTTTCCCTCCATTC 60.396 60.000 0.00 0.0 0.00 2.67 R
3778 5045 1.063764 CTCGTGTAGACTAGTTCGCCC 59.936 57.143 0.00 0.0 0.00 6.13 R
3900 5167 4.107622 CCAGCGGCATTCTTTTCTAATTG 58.892 43.478 1.45 0.0 0.00 2.32 R
4325 6383 0.813821 GCCATTTCTGCAACCCTCTC 59.186 55.000 0.00 0.0 0.00 3.20 R
5399 8170 1.668047 CGTAAGTGACCGTGAAGGGAC 60.668 57.143 0.00 0.0 46.96 4.46 R
6378 9154 0.178885 TCCCTTCCTCTTCGGGGAAA 60.179 55.000 0.00 0.0 44.10 3.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 1.134946 ACACACAAGCAAACAAGAGGC 59.865 47.619 0.00 0.00 0.00 4.70
93 94 4.217767 AGTGGAAAAGAGGGCGAATAAAAC 59.782 41.667 0.00 0.00 0.00 2.43
122 123 1.423921 TGAAGTGGGGGAGAGGAAAAC 59.576 52.381 0.00 0.00 0.00 2.43
135 136 2.162408 GAGGAAAACGAGAGGCAAATGG 59.838 50.000 0.00 0.00 0.00 3.16
195 196 5.279809 GGGTACTTGGTATGTCTTGACTTGA 60.280 44.000 2.35 0.00 0.00 3.02
196 197 5.638234 GGTACTTGGTATGTCTTGACTTGAC 59.362 44.000 2.35 0.00 35.21 3.18
197 198 5.552870 ACTTGGTATGTCTTGACTTGACT 57.447 39.130 2.35 0.00 35.63 3.41
198 199 5.930135 ACTTGGTATGTCTTGACTTGACTT 58.070 37.500 2.35 0.00 35.63 3.01
199 200 5.760253 ACTTGGTATGTCTTGACTTGACTTG 59.240 40.000 2.35 0.00 35.63 3.16
200 201 4.641396 TGGTATGTCTTGACTTGACTTGG 58.359 43.478 2.35 0.00 35.63 3.61
201 202 4.102524 TGGTATGTCTTGACTTGACTTGGT 59.897 41.667 2.35 0.00 35.63 3.67
202 203 4.452455 GGTATGTCTTGACTTGACTTGGTG 59.548 45.833 2.35 0.00 35.63 4.17
203 204 2.288666 TGTCTTGACTTGACTTGGTGC 58.711 47.619 2.35 0.00 35.63 5.01
204 205 2.288666 GTCTTGACTTGACTTGGTGCA 58.711 47.619 0.00 0.00 0.00 4.57
205 206 2.682856 GTCTTGACTTGACTTGGTGCAA 59.317 45.455 0.00 0.00 0.00 4.08
206 207 2.682856 TCTTGACTTGACTTGGTGCAAC 59.317 45.455 0.00 0.00 0.00 4.17
218 219 2.928416 GTGCAACCTCCACTACACC 58.072 57.895 0.00 0.00 0.00 4.16
219 220 0.107831 GTGCAACCTCCACTACACCA 59.892 55.000 0.00 0.00 0.00 4.17
220 221 0.107831 TGCAACCTCCACTACACCAC 59.892 55.000 0.00 0.00 0.00 4.16
221 222 0.107831 GCAACCTCCACTACACCACA 59.892 55.000 0.00 0.00 0.00 4.17
222 223 1.476110 GCAACCTCCACTACACCACAA 60.476 52.381 0.00 0.00 0.00 3.33
223 224 2.218603 CAACCTCCACTACACCACAAC 58.781 52.381 0.00 0.00 0.00 3.32
224 225 1.502690 ACCTCCACTACACCACAACA 58.497 50.000 0.00 0.00 0.00 3.33
225 226 1.140252 ACCTCCACTACACCACAACAC 59.860 52.381 0.00 0.00 0.00 3.32
226 227 1.416401 CCTCCACTACACCACAACACT 59.584 52.381 0.00 0.00 0.00 3.55
227 228 2.158813 CCTCCACTACACCACAACACTT 60.159 50.000 0.00 0.00 0.00 3.16
228 229 3.070446 CCTCCACTACACCACAACACTTA 59.930 47.826 0.00 0.00 0.00 2.24
229 230 4.443739 CCTCCACTACACCACAACACTTAA 60.444 45.833 0.00 0.00 0.00 1.85
230 231 5.298989 TCCACTACACCACAACACTTAAT 57.701 39.130 0.00 0.00 0.00 1.40
231 232 5.686753 TCCACTACACCACAACACTTAATT 58.313 37.500 0.00 0.00 0.00 1.40
232 233 6.828788 TCCACTACACCACAACACTTAATTA 58.171 36.000 0.00 0.00 0.00 1.40
233 234 6.932400 TCCACTACACCACAACACTTAATTAG 59.068 38.462 0.00 0.00 0.00 1.73
234 235 6.148811 CCACTACACCACAACACTTAATTAGG 59.851 42.308 0.00 0.00 0.00 2.69
235 236 6.148811 CACTACACCACAACACTTAATTAGGG 59.851 42.308 0.00 0.00 0.00 3.53
236 237 4.403734 ACACCACAACACTTAATTAGGGG 58.596 43.478 0.00 0.00 0.00 4.79
237 238 4.141111 ACACCACAACACTTAATTAGGGGT 60.141 41.667 0.00 0.00 0.00 4.95
238 239 5.073417 ACACCACAACACTTAATTAGGGGTA 59.927 40.000 2.51 0.00 27.92 3.69
239 240 5.646360 CACCACAACACTTAATTAGGGGTAG 59.354 44.000 2.51 0.00 0.00 3.18
240 241 5.311385 ACCACAACACTTAATTAGGGGTAGT 59.689 40.000 2.51 0.00 0.00 2.73
241 242 6.183361 ACCACAACACTTAATTAGGGGTAGTT 60.183 38.462 2.51 0.00 0.00 2.24
242 243 7.017452 ACCACAACACTTAATTAGGGGTAGTTA 59.983 37.037 2.51 0.00 0.00 2.24
243 244 7.884354 CCACAACACTTAATTAGGGGTAGTTAA 59.116 37.037 2.51 0.00 0.00 2.01
244 245 8.724229 CACAACACTTAATTAGGGGTAGTTAAC 58.276 37.037 2.51 0.00 0.00 2.01
245 246 8.663167 ACAACACTTAATTAGGGGTAGTTAACT 58.337 33.333 13.68 13.68 0.00 2.24
246 247 8.943002 CAACACTTAATTAGGGGTAGTTAACTG 58.057 37.037 18.56 0.00 0.00 3.16
247 248 7.108194 ACACTTAATTAGGGGTAGTTAACTGC 58.892 38.462 18.56 16.55 0.00 4.40
248 249 6.541278 CACTTAATTAGGGGTAGTTAACTGCC 59.459 42.308 28.96 28.96 46.39 4.85
253 254 3.754766 GGTAGTTAACTGCCGGGAG 57.245 57.895 24.46 22.94 38.92 4.30
254 255 1.188863 GGTAGTTAACTGCCGGGAGA 58.811 55.000 31.46 4.83 38.92 3.71
255 256 1.551883 GGTAGTTAACTGCCGGGAGAA 59.448 52.381 31.46 14.37 38.92 2.87
256 257 2.027837 GGTAGTTAACTGCCGGGAGAAA 60.028 50.000 31.46 19.52 38.92 2.52
257 258 3.370209 GGTAGTTAACTGCCGGGAGAAAT 60.370 47.826 31.46 15.92 38.92 2.17
258 259 4.141869 GGTAGTTAACTGCCGGGAGAAATA 60.142 45.833 31.46 14.84 38.92 1.40
259 260 3.870274 AGTTAACTGCCGGGAGAAATAC 58.130 45.455 31.46 19.56 0.00 1.89
260 261 2.589798 TAACTGCCGGGAGAAATACG 57.410 50.000 31.46 1.55 0.00 3.06
261 262 0.611714 AACTGCCGGGAGAAATACGT 59.388 50.000 31.46 2.32 0.00 3.57
262 263 1.477553 ACTGCCGGGAGAAATACGTA 58.522 50.000 31.46 0.00 0.00 3.57
263 264 1.826720 ACTGCCGGGAGAAATACGTAA 59.173 47.619 31.46 0.00 0.00 3.18
264 265 2.234414 ACTGCCGGGAGAAATACGTAAA 59.766 45.455 31.46 0.00 0.00 2.01
265 266 2.606272 CTGCCGGGAGAAATACGTAAAC 59.394 50.000 19.84 0.00 0.00 2.01
266 267 2.028294 TGCCGGGAGAAATACGTAAACA 60.028 45.455 2.18 0.00 0.00 2.83
267 268 3.002102 GCCGGGAGAAATACGTAAACAA 58.998 45.455 2.18 0.00 0.00 2.83
268 269 3.063045 GCCGGGAGAAATACGTAAACAAG 59.937 47.826 2.18 0.00 0.00 3.16
269 270 3.619929 CCGGGAGAAATACGTAAACAAGG 59.380 47.826 0.00 0.00 0.00 3.61
270 271 3.619929 CGGGAGAAATACGTAAACAAGGG 59.380 47.826 0.00 0.00 0.00 3.95
271 272 3.376234 GGGAGAAATACGTAAACAAGGGC 59.624 47.826 0.00 0.00 0.00 5.19
272 273 4.004982 GGAGAAATACGTAAACAAGGGCA 58.995 43.478 0.00 0.00 0.00 5.36
273 274 4.638865 GGAGAAATACGTAAACAAGGGCAT 59.361 41.667 0.00 0.00 0.00 4.40
274 275 5.448632 GGAGAAATACGTAAACAAGGGCATG 60.449 44.000 0.00 0.00 0.00 4.06
275 276 5.007682 AGAAATACGTAAACAAGGGCATGT 58.992 37.500 0.00 0.00 34.24 3.21
276 277 4.695217 AATACGTAAACAAGGGCATGTG 57.305 40.909 0.00 0.00 32.81 3.21
277 278 2.264005 ACGTAAACAAGGGCATGTGA 57.736 45.000 0.00 0.00 32.81 3.58
278 279 2.577700 ACGTAAACAAGGGCATGTGAA 58.422 42.857 0.00 0.00 32.81 3.18
279 280 2.292292 ACGTAAACAAGGGCATGTGAAC 59.708 45.455 0.00 0.00 32.81 3.18
280 281 2.552315 CGTAAACAAGGGCATGTGAACT 59.448 45.455 0.00 0.00 32.81 3.01
281 282 3.609175 CGTAAACAAGGGCATGTGAACTG 60.609 47.826 0.00 0.00 32.81 3.16
282 283 0.675633 AACAAGGGCATGTGAACTGC 59.324 50.000 0.00 0.00 38.93 4.40
287 288 3.667087 GCATGTGAACTGCCGGAA 58.333 55.556 5.05 0.00 33.44 4.30
288 289 1.210155 GCATGTGAACTGCCGGAAC 59.790 57.895 5.05 0.00 33.44 3.62
289 290 1.514678 GCATGTGAACTGCCGGAACA 61.515 55.000 5.05 0.00 33.44 3.18
290 291 0.950836 CATGTGAACTGCCGGAACAA 59.049 50.000 5.05 0.00 0.00 2.83
291 292 1.069022 CATGTGAACTGCCGGAACAAG 60.069 52.381 5.05 0.00 0.00 3.16
292 293 0.107410 TGTGAACTGCCGGAACAAGT 60.107 50.000 5.05 0.00 0.00 3.16
293 294 1.139256 TGTGAACTGCCGGAACAAGTA 59.861 47.619 5.05 0.00 0.00 2.24
294 295 2.224426 TGTGAACTGCCGGAACAAGTAT 60.224 45.455 5.05 0.00 0.00 2.12
295 296 2.415512 GTGAACTGCCGGAACAAGTATC 59.584 50.000 5.05 4.36 0.00 2.24
296 297 2.301870 TGAACTGCCGGAACAAGTATCT 59.698 45.455 5.05 0.00 0.00 1.98
297 298 2.674796 ACTGCCGGAACAAGTATCTC 57.325 50.000 5.05 0.00 0.00 2.75
298 299 1.899814 ACTGCCGGAACAAGTATCTCA 59.100 47.619 5.05 0.00 0.00 3.27
299 300 2.093973 ACTGCCGGAACAAGTATCTCAG 60.094 50.000 5.05 0.00 0.00 3.35
300 301 1.207089 TGCCGGAACAAGTATCTCAGG 59.793 52.381 5.05 0.00 0.00 3.86
301 302 1.473434 GCCGGAACAAGTATCTCAGGG 60.473 57.143 5.05 0.00 0.00 4.45
302 303 1.473434 CCGGAACAAGTATCTCAGGGC 60.473 57.143 0.00 0.00 0.00 5.19
303 304 1.207089 CGGAACAAGTATCTCAGGGCA 59.793 52.381 0.00 0.00 0.00 5.36
304 305 2.158900 CGGAACAAGTATCTCAGGGCAT 60.159 50.000 0.00 0.00 0.00 4.40
305 306 3.069586 CGGAACAAGTATCTCAGGGCATA 59.930 47.826 0.00 0.00 0.00 3.14
306 307 4.636249 GGAACAAGTATCTCAGGGCATAG 58.364 47.826 0.00 0.00 0.00 2.23
307 308 4.503991 GGAACAAGTATCTCAGGGCATAGG 60.504 50.000 0.00 0.00 0.00 2.57
308 309 3.928754 ACAAGTATCTCAGGGCATAGGA 58.071 45.455 0.00 0.00 0.00 2.94
309 310 4.298626 ACAAGTATCTCAGGGCATAGGAA 58.701 43.478 0.00 0.00 0.00 3.36
310 311 4.101741 ACAAGTATCTCAGGGCATAGGAAC 59.898 45.833 0.00 0.00 0.00 3.62
311 312 4.206244 AGTATCTCAGGGCATAGGAACT 57.794 45.455 0.00 0.00 46.37 3.01
312 313 3.900601 AGTATCTCAGGGCATAGGAACTG 59.099 47.826 0.00 0.00 41.52 3.16
313 314 0.833287 TCTCAGGGCATAGGAACTGC 59.167 55.000 0.00 0.00 41.52 4.40
320 321 2.596904 GCATAGGAACTGCCGTTAGA 57.403 50.000 0.00 0.00 41.52 2.10
321 322 2.901249 GCATAGGAACTGCCGTTAGAA 58.099 47.619 0.00 0.00 41.52 2.10
322 323 2.608090 GCATAGGAACTGCCGTTAGAAC 59.392 50.000 0.00 0.00 41.52 3.01
323 324 3.679083 GCATAGGAACTGCCGTTAGAACT 60.679 47.826 0.00 0.00 41.52 3.01
324 325 4.504858 CATAGGAACTGCCGTTAGAACTT 58.495 43.478 0.00 0.00 41.52 2.66
325 326 2.767505 AGGAACTGCCGTTAGAACTTG 58.232 47.619 0.00 0.00 43.43 3.16
326 327 2.367567 AGGAACTGCCGTTAGAACTTGA 59.632 45.455 0.00 0.00 43.43 3.02
327 328 2.737252 GGAACTGCCGTTAGAACTTGAG 59.263 50.000 0.00 0.00 32.39 3.02
328 329 1.797025 ACTGCCGTTAGAACTTGAGC 58.203 50.000 0.00 0.00 0.00 4.26
329 330 1.070134 ACTGCCGTTAGAACTTGAGCA 59.930 47.619 0.00 0.00 0.00 4.26
330 331 2.143122 CTGCCGTTAGAACTTGAGCAA 58.857 47.619 0.00 0.00 0.00 3.91
331 332 2.744202 CTGCCGTTAGAACTTGAGCAAT 59.256 45.455 0.00 0.00 0.00 3.56
332 333 2.483877 TGCCGTTAGAACTTGAGCAATG 59.516 45.455 0.00 0.00 0.00 2.82
333 334 2.729156 GCCGTTAGAACTTGAGCAATGC 60.729 50.000 0.00 0.00 0.00 3.56
334 335 2.474526 CCGTTAGAACTTGAGCAATGCG 60.475 50.000 0.00 0.00 0.00 4.73
335 336 2.474526 CGTTAGAACTTGAGCAATGCGG 60.475 50.000 0.00 0.00 0.00 5.69
336 337 1.737838 TAGAACTTGAGCAATGCGGG 58.262 50.000 0.00 0.00 0.00 6.13
337 338 1.153958 GAACTTGAGCAATGCGGGC 60.154 57.895 0.00 0.00 0.00 6.13
338 339 1.865788 GAACTTGAGCAATGCGGGCA 61.866 55.000 0.00 0.00 0.00 5.36
339 340 2.146073 AACTTGAGCAATGCGGGCAC 62.146 55.000 0.00 0.00 0.00 5.01
352 353 2.590092 GGCACCTTATCTGCCGGT 59.410 61.111 1.90 0.00 44.78 5.28
353 354 1.827394 GGCACCTTATCTGCCGGTA 59.173 57.895 1.90 0.00 44.78 4.02
354 355 0.179468 GGCACCTTATCTGCCGGTAA 59.821 55.000 1.90 0.00 44.78 2.85
355 356 1.407712 GGCACCTTATCTGCCGGTAAA 60.408 52.381 1.90 0.00 44.78 2.01
356 357 2.572290 GCACCTTATCTGCCGGTAAAT 58.428 47.619 1.90 0.00 0.00 1.40
357 358 2.949644 GCACCTTATCTGCCGGTAAATT 59.050 45.455 1.90 0.00 0.00 1.82
358 359 3.380320 GCACCTTATCTGCCGGTAAATTT 59.620 43.478 1.90 0.00 0.00 1.82
359 360 4.577283 GCACCTTATCTGCCGGTAAATTTA 59.423 41.667 1.90 0.00 0.00 1.40
360 361 5.066764 GCACCTTATCTGCCGGTAAATTTAA 59.933 40.000 1.90 0.00 0.00 1.52
361 362 6.725246 CACCTTATCTGCCGGTAAATTTAAG 58.275 40.000 1.90 3.68 0.00 1.85
362 363 5.826208 ACCTTATCTGCCGGTAAATTTAAGG 59.174 40.000 19.10 19.10 40.05 2.69
363 364 5.240844 CCTTATCTGCCGGTAAATTTAAGGG 59.759 44.000 17.62 14.08 33.77 3.95
364 365 2.371306 TCTGCCGGTAAATTTAAGGGC 58.629 47.619 24.00 24.00 40.88 5.19
366 367 1.819903 TGCCGGTAAATTTAAGGGCAC 59.180 47.619 27.24 8.25 44.92 5.01
367 368 1.819903 GCCGGTAAATTTAAGGGCACA 59.180 47.619 25.05 0.00 40.24 4.57
368 369 2.429250 GCCGGTAAATTTAAGGGCACAT 59.571 45.455 25.05 0.00 40.24 3.21
369 370 3.490249 GCCGGTAAATTTAAGGGCACATC 60.490 47.826 25.05 6.93 40.24 3.06
370 371 3.697045 CCGGTAAATTTAAGGGCACATCA 59.303 43.478 11.30 0.00 0.00 3.07
371 372 4.340950 CCGGTAAATTTAAGGGCACATCAT 59.659 41.667 11.30 0.00 0.00 2.45
372 373 5.507315 CCGGTAAATTTAAGGGCACATCATC 60.507 44.000 11.30 0.00 0.00 2.92
373 374 5.299279 CGGTAAATTTAAGGGCACATCATCT 59.701 40.000 0.00 0.00 0.00 2.90
374 375 6.507023 GGTAAATTTAAGGGCACATCATCTG 58.493 40.000 0.00 0.00 0.00 2.90
375 376 4.660789 AATTTAAGGGCACATCATCTGC 57.339 40.909 0.00 0.00 0.00 4.26
379 380 2.903855 GGCACATCATCTGCCGGG 60.904 66.667 2.18 0.00 44.78 5.73
380 381 2.190313 GCACATCATCTGCCGGGA 59.810 61.111 2.18 0.00 0.00 5.14
381 382 2.182842 GCACATCATCTGCCGGGAC 61.183 63.158 2.18 0.00 0.00 4.46
382 383 1.221566 CACATCATCTGCCGGGACA 59.778 57.895 2.18 0.00 0.00 4.02
383 384 0.392863 CACATCATCTGCCGGGACAA 60.393 55.000 2.18 0.00 0.00 3.18
384 385 0.392998 ACATCATCTGCCGGGACAAC 60.393 55.000 2.18 0.00 0.00 3.32
385 386 0.107508 CATCATCTGCCGGGACAACT 60.108 55.000 2.18 0.00 0.00 3.16
386 387 1.138859 CATCATCTGCCGGGACAACTA 59.861 52.381 2.18 0.00 0.00 2.24
387 388 1.271856 TCATCTGCCGGGACAACTAA 58.728 50.000 2.18 0.00 0.00 2.24
388 389 1.626321 TCATCTGCCGGGACAACTAAA 59.374 47.619 2.18 0.00 0.00 1.85
389 390 2.238646 TCATCTGCCGGGACAACTAAAT 59.761 45.455 2.18 0.00 0.00 1.40
390 391 2.396590 TCTGCCGGGACAACTAAATC 57.603 50.000 2.18 0.00 0.00 2.17
391 392 1.006832 CTGCCGGGACAACTAAATCG 58.993 55.000 2.18 0.00 0.00 3.34
392 393 0.322322 TGCCGGGACAACTAAATCGT 59.678 50.000 2.18 0.00 0.00 3.73
393 394 0.725117 GCCGGGACAACTAAATCGTG 59.275 55.000 2.18 0.00 0.00 4.35
394 395 1.365699 CCGGGACAACTAAATCGTGG 58.634 55.000 0.00 0.00 0.00 4.94
395 396 0.725117 CGGGACAACTAAATCGTGGC 59.275 55.000 0.00 0.00 0.00 5.01
396 397 1.674817 CGGGACAACTAAATCGTGGCT 60.675 52.381 0.00 0.00 0.00 4.75
397 398 2.433436 GGGACAACTAAATCGTGGCTT 58.567 47.619 0.00 0.00 0.00 4.35
398 399 2.418976 GGGACAACTAAATCGTGGCTTC 59.581 50.000 0.00 0.00 0.00 3.86
399 400 3.335579 GGACAACTAAATCGTGGCTTCT 58.664 45.455 0.00 0.00 0.00 2.85
400 401 4.501071 GGACAACTAAATCGTGGCTTCTA 58.499 43.478 0.00 0.00 0.00 2.10
401 402 4.933400 GGACAACTAAATCGTGGCTTCTAA 59.067 41.667 0.00 0.00 0.00 2.10
402 403 5.585047 GGACAACTAAATCGTGGCTTCTAAT 59.415 40.000 0.00 0.00 0.00 1.73
403 404 6.238130 GGACAACTAAATCGTGGCTTCTAATC 60.238 42.308 0.00 0.00 0.00 1.75
404 405 6.407202 ACAACTAAATCGTGGCTTCTAATCT 58.593 36.000 0.00 0.00 0.00 2.40
405 406 6.313905 ACAACTAAATCGTGGCTTCTAATCTG 59.686 38.462 0.00 0.00 0.00 2.90
406 407 4.811557 ACTAAATCGTGGCTTCTAATCTGC 59.188 41.667 0.00 0.00 0.00 4.26
407 408 2.246719 ATCGTGGCTTCTAATCTGCC 57.753 50.000 0.00 0.00 46.26 4.85
411 412 3.297391 GGCTTCTAATCTGCCGAGG 57.703 57.895 0.00 0.00 37.11 4.63
412 413 0.753262 GGCTTCTAATCTGCCGAGGA 59.247 55.000 0.00 0.00 37.11 3.71
413 414 1.539280 GGCTTCTAATCTGCCGAGGAC 60.539 57.143 0.00 0.00 37.11 3.85
414 415 1.539280 GCTTCTAATCTGCCGAGGACC 60.539 57.143 0.00 0.00 0.00 4.46
415 416 0.744874 TTCTAATCTGCCGAGGACCG 59.255 55.000 0.00 0.00 38.18 4.79
416 417 0.395311 TCTAATCTGCCGAGGACCGT 60.395 55.000 0.00 0.00 36.31 4.83
417 418 0.030908 CTAATCTGCCGAGGACCGTC 59.969 60.000 0.00 0.00 36.31 4.79
418 419 1.389609 TAATCTGCCGAGGACCGTCC 61.390 60.000 9.81 9.81 36.58 4.79
438 439 4.014065 GACGTGAGGCCGAATAGC 57.986 61.111 0.00 0.00 0.00 2.97
439 440 1.141019 GACGTGAGGCCGAATAGCA 59.859 57.895 0.00 0.00 0.00 3.49
440 441 0.249489 GACGTGAGGCCGAATAGCAT 60.249 55.000 0.00 0.00 0.00 3.79
441 442 0.249489 ACGTGAGGCCGAATAGCATC 60.249 55.000 0.00 0.00 43.67 3.91
442 443 1.278172 CGTGAGGCCGAATAGCATCG 61.278 60.000 0.00 0.22 46.26 3.84
451 452 3.729526 CGAATAGCATCGGCCATAAAG 57.270 47.619 2.24 0.00 42.56 1.85
452 453 2.159653 CGAATAGCATCGGCCATAAAGC 60.160 50.000 2.24 0.00 42.56 3.51
453 454 1.442769 ATAGCATCGGCCATAAAGCG 58.557 50.000 2.24 0.00 42.56 4.68
454 455 1.227999 TAGCATCGGCCATAAAGCGC 61.228 55.000 2.24 0.00 42.56 5.92
455 456 2.249309 CATCGGCCATAAAGCGCG 59.751 61.111 0.00 0.00 0.00 6.86
456 457 3.649986 ATCGGCCATAAAGCGCGC 61.650 61.111 26.66 26.66 0.00 6.86
471 472 4.896829 CGCGCTAGGGAGGGGAGA 62.897 72.222 11.61 0.00 36.16 3.71
472 473 2.915137 GCGCTAGGGAGGGGAGAG 60.915 72.222 11.61 0.00 36.16 3.20
473 474 2.915137 CGCTAGGGAGGGGAGAGC 60.915 72.222 0.00 0.00 32.02 4.09
474 475 2.915137 GCTAGGGAGGGGAGAGCG 60.915 72.222 0.00 0.00 0.00 5.03
475 476 2.915137 CTAGGGAGGGGAGAGCGC 60.915 72.222 0.00 0.00 0.00 5.92
476 477 4.896829 TAGGGAGGGGAGAGCGCG 62.897 72.222 0.00 0.00 0.00 6.86
484 485 4.897856 GGAGAGCGCGCGAGAGAC 62.898 72.222 37.18 15.96 0.00 3.36
485 486 4.167359 GAGAGCGCGCGAGAGACA 62.167 66.667 37.18 0.00 0.00 3.41
486 487 3.669036 GAGAGCGCGCGAGAGACAA 62.669 63.158 37.18 0.00 0.00 3.18
487 488 2.805353 GAGCGCGCGAGAGACAAA 60.805 61.111 37.18 0.00 0.00 2.83
488 489 2.355837 AGCGCGCGAGAGACAAAA 60.356 55.556 37.18 0.00 0.00 2.44
489 490 1.687494 GAGCGCGCGAGAGACAAAAT 61.687 55.000 37.18 2.39 0.00 1.82
490 491 1.132640 GCGCGCGAGAGACAAAATT 59.867 52.632 37.18 0.00 0.00 1.82
491 492 0.452784 GCGCGCGAGAGACAAAATTT 60.453 50.000 37.18 0.00 0.00 1.82
492 493 1.950472 CGCGCGAGAGACAAAATTTT 58.050 45.000 28.94 0.00 0.00 1.82
493 494 2.307049 CGCGCGAGAGACAAAATTTTT 58.693 42.857 28.94 0.00 0.00 1.94
494 495 2.087451 CGCGCGAGAGACAAAATTTTTG 59.913 45.455 28.94 18.08 0.00 2.44
495 496 2.405025 GCGCGAGAGACAAAATTTTTGG 59.595 45.455 22.27 7.70 0.00 3.28
496 497 3.628017 CGCGAGAGACAAAATTTTTGGT 58.372 40.909 22.27 11.51 0.00 3.67
497 498 3.664025 CGCGAGAGACAAAATTTTTGGTC 59.336 43.478 22.27 17.89 40.63 4.02
498 499 3.981416 GCGAGAGACAAAATTTTTGGTCC 59.019 43.478 22.27 12.65 41.12 4.46
499 500 4.499019 GCGAGAGACAAAATTTTTGGTCCA 60.499 41.667 22.27 0.00 41.12 4.02
500 501 5.587289 CGAGAGACAAAATTTTTGGTCCAA 58.413 37.500 22.27 0.00 41.12 3.53
501 502 6.039616 CGAGAGACAAAATTTTTGGTCCAAA 58.960 36.000 22.27 13.26 41.12 3.28
502 503 6.533367 CGAGAGACAAAATTTTTGGTCCAAAA 59.467 34.615 23.25 23.25 41.12 2.44
503 504 7.224557 CGAGAGACAAAATTTTTGGTCCAAAAT 59.775 33.333 26.58 13.31 41.89 1.82
504 505 9.541143 GAGAGACAAAATTTTTGGTCCAAAATA 57.459 29.630 26.58 18.32 41.89 1.40
505 506 9.898152 AGAGACAAAATTTTTGGTCCAAAATAA 57.102 25.926 26.58 15.56 41.89 1.40
517 518 4.217754 TCCAAAATAATTATGGACGCGC 57.782 40.909 5.73 0.00 38.30 6.86
518 519 2.970609 CCAAAATAATTATGGACGCGCG 59.029 45.455 30.96 30.96 36.27 6.86
519 520 2.961522 AAATAATTATGGACGCGCGG 57.038 45.000 35.22 16.31 0.00 6.46
520 521 1.153353 AATAATTATGGACGCGCGGG 58.847 50.000 35.22 22.69 0.00 6.13
521 522 1.296056 ATAATTATGGACGCGCGGGC 61.296 55.000 35.22 24.56 0.00 6.13
536 537 2.035783 GGCCCTCCACCCAAAGTC 59.964 66.667 0.00 0.00 0.00 3.01
537 538 2.840753 GGCCCTCCACCCAAAGTCA 61.841 63.158 0.00 0.00 0.00 3.41
538 539 1.303643 GCCCTCCACCCAAAGTCAG 60.304 63.158 0.00 0.00 0.00 3.51
539 540 1.303643 CCCTCCACCCAAAGTCAGC 60.304 63.158 0.00 0.00 0.00 4.26
540 541 1.672356 CCTCCACCCAAAGTCAGCG 60.672 63.158 0.00 0.00 0.00 5.18
541 542 1.371183 CTCCACCCAAAGTCAGCGA 59.629 57.895 0.00 0.00 0.00 4.93
542 543 0.951040 CTCCACCCAAAGTCAGCGAC 60.951 60.000 0.00 1.15 0.00 5.19
543 544 1.227823 CCACCCAAAGTCAGCGACA 60.228 57.895 10.52 0.00 34.60 4.35
544 545 0.817634 CCACCCAAAGTCAGCGACAA 60.818 55.000 10.52 0.00 34.60 3.18
545 546 0.307760 CACCCAAAGTCAGCGACAAC 59.692 55.000 10.52 0.00 34.60 3.32
546 547 0.818040 ACCCAAAGTCAGCGACAACC 60.818 55.000 10.52 0.00 34.60 3.77
547 548 0.535102 CCCAAAGTCAGCGACAACCT 60.535 55.000 10.52 0.00 34.60 3.50
548 549 0.868406 CCAAAGTCAGCGACAACCTC 59.132 55.000 10.52 0.00 34.60 3.85
549 550 0.868406 CAAAGTCAGCGACAACCTCC 59.132 55.000 10.52 0.00 34.60 4.30
550 551 0.250338 AAAGTCAGCGACAACCTCCC 60.250 55.000 10.52 0.00 34.60 4.30
551 552 2.047179 GTCAGCGACAACCTCCCC 60.047 66.667 4.20 0.00 32.09 4.81
552 553 2.203788 TCAGCGACAACCTCCCCT 60.204 61.111 0.00 0.00 0.00 4.79
553 554 2.266055 CAGCGACAACCTCCCCTC 59.734 66.667 0.00 0.00 0.00 4.30
554 555 3.003763 AGCGACAACCTCCCCTCC 61.004 66.667 0.00 0.00 0.00 4.30
555 556 3.319198 GCGACAACCTCCCCTCCA 61.319 66.667 0.00 0.00 0.00 3.86
556 557 2.890766 GCGACAACCTCCCCTCCAA 61.891 63.158 0.00 0.00 0.00 3.53
557 558 1.758592 CGACAACCTCCCCTCCAAA 59.241 57.895 0.00 0.00 0.00 3.28
558 559 0.109723 CGACAACCTCCCCTCCAAAA 59.890 55.000 0.00 0.00 0.00 2.44
559 560 1.477923 CGACAACCTCCCCTCCAAAAA 60.478 52.381 0.00 0.00 0.00 1.94
560 561 2.239400 GACAACCTCCCCTCCAAAAAG 58.761 52.381 0.00 0.00 0.00 2.27
561 562 1.856920 ACAACCTCCCCTCCAAAAAGA 59.143 47.619 0.00 0.00 0.00 2.52
562 563 2.246327 ACAACCTCCCCTCCAAAAAGAA 59.754 45.455 0.00 0.00 0.00 2.52
563 564 3.304829 CAACCTCCCCTCCAAAAAGAAA 58.695 45.455 0.00 0.00 0.00 2.52
564 565 3.699025 ACCTCCCCTCCAAAAAGAAAA 57.301 42.857 0.00 0.00 0.00 2.29
565 566 4.002256 ACCTCCCCTCCAAAAAGAAAAA 57.998 40.909 0.00 0.00 0.00 1.94
582 583 1.892209 AAAAACCTAGGTCACAGCCG 58.108 50.000 16.64 0.00 0.00 5.52
583 584 0.605589 AAAACCTAGGTCACAGCCGC 60.606 55.000 16.64 0.00 0.00 6.53
584 585 2.465055 AAACCTAGGTCACAGCCGCC 62.465 60.000 16.64 0.00 0.00 6.13
585 586 4.162690 CCTAGGTCACAGCCGCCC 62.163 72.222 0.00 0.00 0.00 6.13
586 587 4.162690 CTAGGTCACAGCCGCCCC 62.163 72.222 0.00 0.00 0.00 5.80
590 591 4.966787 GTCACAGCCGCCCCCAAA 62.967 66.667 0.00 0.00 0.00 3.28
657 658 4.440829 CCCCCAACCATCCCACCG 62.441 72.222 0.00 0.00 0.00 4.94
712 713 2.272146 CCTCCACCCCGACCATTG 59.728 66.667 0.00 0.00 0.00 2.82
761 762 2.529136 ACTGGCAGCACCCCACTA 60.529 61.111 15.89 0.00 37.83 2.74
792 796 4.056125 CTGTCGCCGAGCCACTCA 62.056 66.667 0.00 0.00 0.00 3.41
795 799 4.373116 TCGCCGAGCCACTCAACC 62.373 66.667 0.00 0.00 0.00 3.77
802 806 4.681978 GCCACTCAACCGGCGACT 62.682 66.667 9.30 0.00 38.82 4.18
1028 1032 2.285773 TGCAGACGATGGAGCCAGT 61.286 57.895 0.00 0.00 0.00 4.00
1147 1151 7.813627 AGAGAAGAACAAGTAGGTAATTCGAAC 59.186 37.037 0.00 0.00 0.00 3.95
1309 1328 1.079612 GCATCAGGGGCAAACAAGC 60.080 57.895 0.00 0.00 0.00 4.01
1448 1643 4.402793 AGGTGAACTGTACTATAGGCTGTG 59.597 45.833 4.43 0.00 0.00 3.66
1449 1644 4.113354 GTGAACTGTACTATAGGCTGTGC 58.887 47.826 4.43 6.24 0.00 4.57
1631 1861 3.688694 TGTTTACTGTCGGTGGCTTAT 57.311 42.857 0.00 0.00 0.00 1.73
1632 1862 4.010667 TGTTTACTGTCGGTGGCTTATT 57.989 40.909 0.00 0.00 0.00 1.40
1633 1863 4.391155 TGTTTACTGTCGGTGGCTTATTT 58.609 39.130 0.00 0.00 0.00 1.40
1634 1864 4.214545 TGTTTACTGTCGGTGGCTTATTTG 59.785 41.667 0.00 0.00 0.00 2.32
1635 1865 2.561478 ACTGTCGGTGGCTTATTTGT 57.439 45.000 0.00 0.00 0.00 2.83
1636 1866 3.688694 ACTGTCGGTGGCTTATTTGTA 57.311 42.857 0.00 0.00 0.00 2.41
1637 1867 4.216411 ACTGTCGGTGGCTTATTTGTAT 57.784 40.909 0.00 0.00 0.00 2.29
1638 1868 3.938963 ACTGTCGGTGGCTTATTTGTATG 59.061 43.478 0.00 0.00 0.00 2.39
1639 1869 2.680841 TGTCGGTGGCTTATTTGTATGC 59.319 45.455 0.00 0.00 0.00 3.14
1640 1870 2.032924 GTCGGTGGCTTATTTGTATGCC 59.967 50.000 0.00 0.00 45.10 4.40
1641 1871 2.092646 TCGGTGGCTTATTTGTATGCCT 60.093 45.455 11.93 0.00 45.11 4.75
1642 1872 3.134985 TCGGTGGCTTATTTGTATGCCTA 59.865 43.478 11.93 0.00 45.11 3.93
1643 1873 3.880490 CGGTGGCTTATTTGTATGCCTAA 59.120 43.478 11.93 0.00 45.11 2.69
1644 1874 4.261031 CGGTGGCTTATTTGTATGCCTAAC 60.261 45.833 11.93 4.82 45.11 2.34
1645 1875 4.642885 GGTGGCTTATTTGTATGCCTAACA 59.357 41.667 11.93 0.00 45.11 2.41
1646 1876 5.126384 GGTGGCTTATTTGTATGCCTAACAA 59.874 40.000 11.93 0.00 45.11 2.83
1654 1884 6.849085 TTTGTATGCCTAACAAATGTGGAT 57.151 33.333 4.72 0.00 40.83 3.41
1655 1885 5.833406 TGTATGCCTAACAAATGTGGATG 57.167 39.130 0.00 0.00 0.00 3.51
1656 1886 4.644234 TGTATGCCTAACAAATGTGGATGG 59.356 41.667 0.00 0.00 0.00 3.51
1657 1887 2.455557 TGCCTAACAAATGTGGATGGG 58.544 47.619 0.00 0.00 0.00 4.00
1658 1888 1.136891 GCCTAACAAATGTGGATGGGC 59.863 52.381 3.14 3.14 35.96 5.36
1659 1889 2.738743 CCTAACAAATGTGGATGGGCT 58.261 47.619 0.00 0.00 0.00 5.19
1660 1890 3.099141 CCTAACAAATGTGGATGGGCTT 58.901 45.455 0.00 0.00 0.00 4.35
1661 1891 3.131046 CCTAACAAATGTGGATGGGCTTC 59.869 47.826 0.00 0.00 0.00 3.86
1662 1892 2.610438 ACAAATGTGGATGGGCTTCT 57.390 45.000 0.00 0.00 0.00 2.85
1663 1893 3.737559 ACAAATGTGGATGGGCTTCTA 57.262 42.857 0.00 0.00 0.00 2.10
1664 1894 3.624777 ACAAATGTGGATGGGCTTCTAG 58.375 45.455 0.00 0.00 0.00 2.43
1665 1895 2.355010 AATGTGGATGGGCTTCTAGC 57.645 50.000 0.00 0.00 41.46 3.42
1674 1904 4.943822 GCTTCTAGCCCAGTGGTC 57.056 61.111 8.74 0.00 34.48 4.02
1675 1905 1.983224 GCTTCTAGCCCAGTGGTCA 59.017 57.895 8.74 0.00 34.48 4.02
1676 1906 0.107945 GCTTCTAGCCCAGTGGTCAG 60.108 60.000 8.74 1.99 34.48 3.51
1677 1907 0.107945 CTTCTAGCCCAGTGGTCAGC 60.108 60.000 8.74 4.46 0.00 4.26
1678 1908 1.888436 TTCTAGCCCAGTGGTCAGCG 61.888 60.000 8.74 0.00 0.00 5.18
1679 1909 2.283604 TAGCCCAGTGGTCAGCGA 60.284 61.111 8.74 0.00 0.00 4.93
1680 1910 1.888436 CTAGCCCAGTGGTCAGCGAA 61.888 60.000 8.74 0.00 0.00 4.70
1681 1911 2.167398 TAGCCCAGTGGTCAGCGAAC 62.167 60.000 8.74 0.00 0.00 3.95
1682 1912 2.738521 CCCAGTGGTCAGCGAACG 60.739 66.667 8.74 0.00 0.00 3.95
1683 1913 2.738521 CCAGTGGTCAGCGAACGG 60.739 66.667 0.00 0.00 0.00 4.44
1684 1914 3.414700 CAGTGGTCAGCGAACGGC 61.415 66.667 0.00 0.00 44.05 5.68
1700 1930 4.687215 GCTGTGTGAGCTGGCCGA 62.687 66.667 0.00 0.00 45.21 5.54
1701 1931 2.740055 CTGTGTGAGCTGGCCGAC 60.740 66.667 0.00 0.00 0.00 4.79
1702 1932 4.662961 TGTGTGAGCTGGCCGACG 62.663 66.667 0.00 0.00 0.00 5.12
1715 1945 4.379243 CGACGCAGGTTGGAGCCT 62.379 66.667 0.00 0.00 39.99 4.58
1716 1946 2.435059 GACGCAGGTTGGAGCCTC 60.435 66.667 0.00 0.00 36.58 4.70
1717 1947 4.379243 ACGCAGGTTGGAGCCTCG 62.379 66.667 0.00 0.00 36.58 4.63
1729 1959 2.409651 GCCTCGGCTCGTACTCTG 59.590 66.667 0.00 0.00 38.26 3.35
1730 1960 2.409651 CCTCGGCTCGTACTCTGC 59.590 66.667 0.00 0.00 0.00 4.26
1731 1961 2.115911 CCTCGGCTCGTACTCTGCT 61.116 63.158 0.00 0.00 0.00 4.24
1732 1962 1.063327 CTCGGCTCGTACTCTGCTG 59.937 63.158 0.00 0.00 34.66 4.41
1733 1963 1.649390 CTCGGCTCGTACTCTGCTGT 61.649 60.000 9.24 0.00 34.91 4.40
1734 1964 1.226435 CGGCTCGTACTCTGCTGTC 60.226 63.158 0.00 0.00 0.00 3.51
1735 1965 1.649390 CGGCTCGTACTCTGCTGTCT 61.649 60.000 0.00 0.00 0.00 3.41
1736 1966 0.099791 GGCTCGTACTCTGCTGTCTC 59.900 60.000 0.00 0.00 0.00 3.36
1737 1967 0.805614 GCTCGTACTCTGCTGTCTCA 59.194 55.000 0.00 0.00 0.00 3.27
1738 1968 1.466697 GCTCGTACTCTGCTGTCTCAC 60.467 57.143 0.00 0.00 0.00 3.51
1739 1969 1.807142 CTCGTACTCTGCTGTCTCACA 59.193 52.381 0.00 0.00 0.00 3.58
1740 1970 2.421775 CTCGTACTCTGCTGTCTCACAT 59.578 50.000 0.00 0.00 0.00 3.21
1741 1971 2.820197 TCGTACTCTGCTGTCTCACATT 59.180 45.455 0.00 0.00 0.00 2.71
1742 1972 3.119814 TCGTACTCTGCTGTCTCACATTC 60.120 47.826 0.00 0.00 0.00 2.67
1743 1973 3.119673 CGTACTCTGCTGTCTCACATTCT 60.120 47.826 0.00 0.00 0.00 2.40
1744 1974 3.591196 ACTCTGCTGTCTCACATTCTC 57.409 47.619 0.00 0.00 0.00 2.87
1745 1975 2.233431 ACTCTGCTGTCTCACATTCTCC 59.767 50.000 0.00 0.00 0.00 3.71
1746 1976 2.496871 CTCTGCTGTCTCACATTCTCCT 59.503 50.000 0.00 0.00 0.00 3.69
1747 1977 2.495270 TCTGCTGTCTCACATTCTCCTC 59.505 50.000 0.00 0.00 0.00 3.71
1748 1978 2.496871 CTGCTGTCTCACATTCTCCTCT 59.503 50.000 0.00 0.00 0.00 3.69
1749 1979 2.902486 TGCTGTCTCACATTCTCCTCTT 59.098 45.455 0.00 0.00 0.00 2.85
1750 1980 4.089361 TGCTGTCTCACATTCTCCTCTTA 58.911 43.478 0.00 0.00 0.00 2.10
1751 1981 4.528206 TGCTGTCTCACATTCTCCTCTTAA 59.472 41.667 0.00 0.00 0.00 1.85
1752 1982 5.188555 TGCTGTCTCACATTCTCCTCTTAAT 59.811 40.000 0.00 0.00 0.00 1.40
1753 1983 6.112058 GCTGTCTCACATTCTCCTCTTAATT 58.888 40.000 0.00 0.00 0.00 1.40
1754 1984 7.093333 TGCTGTCTCACATTCTCCTCTTAATTA 60.093 37.037 0.00 0.00 0.00 1.40
1755 1985 7.766278 GCTGTCTCACATTCTCCTCTTAATTAA 59.234 37.037 0.00 0.00 0.00 1.40
1756 1986 9.658799 CTGTCTCACATTCTCCTCTTAATTAAA 57.341 33.333 0.00 0.00 0.00 1.52
1777 2007 3.653835 AAATCAGTAGGGCTTCTTCCC 57.346 47.619 0.00 0.00 46.93 3.97
1784 2014 1.915983 GGGCTTCTTCCCCTACTGG 59.084 63.158 0.00 0.00 40.51 4.00
1785 2015 0.914902 GGGCTTCTTCCCCTACTGGT 60.915 60.000 0.00 0.00 40.51 4.00
1786 2016 0.542333 GGCTTCTTCCCCTACTGGTC 59.458 60.000 0.00 0.00 0.00 4.02
1787 2017 1.574263 GCTTCTTCCCCTACTGGTCT 58.426 55.000 0.00 0.00 0.00 3.85
1788 2018 2.626149 GGCTTCTTCCCCTACTGGTCTA 60.626 54.545 0.00 0.00 0.00 2.59
1789 2019 2.696187 GCTTCTTCCCCTACTGGTCTAG 59.304 54.545 0.00 0.00 0.00 2.43
1790 2020 3.882515 GCTTCTTCCCCTACTGGTCTAGT 60.883 52.174 0.00 0.00 43.56 2.57
1791 2021 4.354662 CTTCTTCCCCTACTGGTCTAGTT 58.645 47.826 0.00 0.00 40.89 2.24
1844 2077 9.995003 ATGCTCATTTGGTAAAAATTTCTTACA 57.005 25.926 17.37 4.46 31.99 2.41
1845 2078 9.255304 TGCTCATTTGGTAAAAATTTCTTACAC 57.745 29.630 17.37 11.25 31.99 2.90
1846 2079 9.476202 GCTCATTTGGTAAAAATTTCTTACACT 57.524 29.630 17.37 4.52 31.99 3.55
1876 2114 2.099141 TGTTCATGTGCTAGTCTGGC 57.901 50.000 0.32 0.32 0.00 4.85
1877 2115 1.347378 TGTTCATGTGCTAGTCTGGCA 59.653 47.619 6.82 6.82 37.36 4.92
1879 2117 3.012518 GTTCATGTGCTAGTCTGGCATT 58.987 45.455 14.53 2.60 41.86 3.56
1895 2133 3.071747 TGGCATTGGTGAACTGTACTGTA 59.928 43.478 5.76 0.00 0.00 2.74
1896 2134 3.684788 GGCATTGGTGAACTGTACTGTAG 59.315 47.826 5.76 0.00 0.00 2.74
1897 2135 3.684788 GCATTGGTGAACTGTACTGTAGG 59.315 47.826 5.76 0.00 0.00 3.18
1898 2136 4.802918 GCATTGGTGAACTGTACTGTAGGT 60.803 45.833 5.76 0.00 0.00 3.08
1899 2137 5.305585 CATTGGTGAACTGTACTGTAGGTT 58.694 41.667 5.76 6.00 0.00 3.50
1900 2138 4.330944 TGGTGAACTGTACTGTAGGTTG 57.669 45.455 5.76 0.00 0.00 3.77
1901 2139 3.707611 TGGTGAACTGTACTGTAGGTTGT 59.292 43.478 5.76 0.00 0.00 3.32
1902 2140 4.056050 GGTGAACTGTACTGTAGGTTGTG 58.944 47.826 5.76 0.00 0.00 3.33
1903 2141 3.493503 GTGAACTGTACTGTAGGTTGTGC 59.506 47.826 5.76 0.00 0.00 4.57
1904 2142 3.133183 TGAACTGTACTGTAGGTTGTGCA 59.867 43.478 5.76 0.00 0.00 4.57
1905 2143 3.107642 ACTGTACTGTAGGTTGTGCAC 57.892 47.619 10.75 10.75 0.00 4.57
1906 2144 2.698797 ACTGTACTGTAGGTTGTGCACT 59.301 45.455 19.41 0.00 0.00 4.40
1907 2145 3.134081 ACTGTACTGTAGGTTGTGCACTT 59.866 43.478 19.41 3.78 0.00 3.16
1908 2146 3.462982 TGTACTGTAGGTTGTGCACTTG 58.537 45.455 19.41 1.92 0.00 3.16
1909 2147 1.308998 ACTGTAGGTTGTGCACTTGC 58.691 50.000 19.41 7.81 42.50 4.01
1928 2166 1.238439 CCTGTAGGTTGTGCACTTGG 58.762 55.000 19.41 4.74 0.00 3.61
1935 2173 0.239347 GTTGTGCACTTGGCTAGCTG 59.761 55.000 19.41 5.97 45.15 4.24
1995 2245 7.166758 AGGGTGTATTTGAGATCCCATTTAT 57.833 36.000 0.00 0.00 37.56 1.40
2005 2255 5.072736 TGAGATCCCATTTATCTGCTCATGT 59.927 40.000 0.00 0.00 33.82 3.21
2014 2264 9.674824 CCATTTATCTGCTCATGTCTTATTTTC 57.325 33.333 0.00 0.00 0.00 2.29
2021 2271 6.003326 TGCTCATGTCTTATTTTCAGTTCCA 58.997 36.000 0.00 0.00 0.00 3.53
2139 2392 6.593770 TGTGTGATAGTATGGTTTGTCATGAC 59.406 38.462 19.27 19.27 0.00 3.06
2141 2394 7.010552 GTGTGATAGTATGGTTTGTCATGACTC 59.989 40.741 25.55 15.41 0.00 3.36
2142 2395 7.041721 GTGATAGTATGGTTTGTCATGACTCA 58.958 38.462 25.55 17.65 0.00 3.41
2144 2397 4.245660 AGTATGGTTTGTCATGACTCACG 58.754 43.478 25.55 0.00 0.00 4.35
2145 2398 2.900716 TGGTTTGTCATGACTCACGA 57.099 45.000 25.55 15.90 0.00 4.35
2146 2399 2.754472 TGGTTTGTCATGACTCACGAG 58.246 47.619 25.55 0.00 0.00 4.18
2147 2400 2.102420 TGGTTTGTCATGACTCACGAGT 59.898 45.455 25.55 0.00 45.84 4.18
2148 2401 2.476619 GGTTTGTCATGACTCACGAGTG 59.523 50.000 25.55 0.00 42.66 3.51
2170 2423 5.846473 GTGTGTCGAAAAATCTAGACTTTGC 59.154 40.000 0.00 0.00 34.92 3.68
2185 2438 6.446781 AGACTTTGCCATGACTTGATATTG 57.553 37.500 0.00 0.00 0.00 1.90
2195 2449 6.293462 CCATGACTTGATATTGCAGAGATGTG 60.293 42.308 0.00 0.00 0.00 3.21
2207 2461 3.502920 CAGAGATGTGTGTCGGAAGTAC 58.497 50.000 0.00 0.00 0.00 2.73
2222 2476 4.494484 GGAAGTACAAATTGGTCCAATGC 58.506 43.478 18.02 0.36 34.04 3.56
2223 2477 4.220602 GGAAGTACAAATTGGTCCAATGCT 59.779 41.667 18.02 5.79 34.04 3.79
2231 2485 6.663093 ACAAATTGGTCCAATGCTTACTATCA 59.337 34.615 18.02 0.00 34.04 2.15
2238 2494 5.751028 GTCCAATGCTTACTATCACTCTCAC 59.249 44.000 0.00 0.00 0.00 3.51
2239 2495 5.422012 TCCAATGCTTACTATCACTCTCACA 59.578 40.000 0.00 0.00 0.00 3.58
2284 2540 7.041098 ACAGAAAGCTTTACGAAGTGAATTCAT 60.041 33.333 12.68 0.00 45.73 2.57
2322 2730 4.340617 TGTGTATGGAAGGGAAATTGGAC 58.659 43.478 0.00 0.00 0.00 4.02
2350 2758 7.161404 TCTGCTCACTGTGTACTAATCAAAAT 58.839 34.615 7.79 0.00 0.00 1.82
2351 2759 7.118245 TCTGCTCACTGTGTACTAATCAAAATG 59.882 37.037 7.79 0.00 0.00 2.32
2386 2794 4.125703 CTCTACTCATTCTGGTTCATGCC 58.874 47.826 0.00 0.00 0.00 4.40
2412 2821 8.831372 CGCTATTAATTATAAGCGCTTCTTTTG 58.169 33.333 28.82 8.65 38.87 2.44
2491 2900 7.327032 GCTTTGGATGTCACTTGAAAAACTATC 59.673 37.037 0.00 0.00 0.00 2.08
2550 2959 8.540388 AGATGTCAAAGTATAAGGAACAAGCTA 58.460 33.333 0.00 0.00 0.00 3.32
2570 2979 9.121517 CAAGCTAATGTACAAGATGTCTTTTTG 57.878 33.333 0.00 0.00 33.11 2.44
2578 2987 7.753132 TGTACAAGATGTCTTTTTGTTGTTGTC 59.247 33.333 0.00 0.00 36.52 3.18
2603 3012 5.440685 CGAAAAGCTCGTTTACAAGATGTT 58.559 37.500 0.00 0.00 42.89 2.71
2608 3017 7.724305 AAGCTCGTTTACAAGATGTTAAAGA 57.276 32.000 0.00 0.00 29.79 2.52
2668 3085 6.710692 ATAATAGCAGCTTTGCAAAAACAC 57.289 33.333 13.84 3.74 37.25 3.32
2669 3086 2.383368 AGCAGCTTTGCAAAAACACA 57.617 40.000 13.84 0.00 37.25 3.72
2670 3087 2.273557 AGCAGCTTTGCAAAAACACAG 58.726 42.857 13.84 0.96 37.25 3.66
2671 3088 2.001872 GCAGCTTTGCAAAAACACAGT 58.998 42.857 13.84 0.00 34.41 3.55
2727 3146 8.281531 AGTTTCCCATCTGATGTTTATGGATTA 58.718 33.333 15.95 4.63 42.36 1.75
2742 3161 8.352942 GTTTATGGATTACTTATGGCAAGGAAG 58.647 37.037 0.00 0.00 0.00 3.46
2748 3167 2.307098 ACTTATGGCAAGGAAGCAGAGT 59.693 45.455 0.00 0.00 35.83 3.24
2754 3173 1.538950 GCAAGGAAGCAGAGTTTGGAG 59.461 52.381 0.00 0.00 0.00 3.86
2802 3221 6.321181 TGTTTAAAAGATGAACCAGAGCAAGT 59.679 34.615 0.00 0.00 0.00 3.16
2854 3273 6.878923 ACAACTTTGCTTCTATGTATGCAGTA 59.121 34.615 0.00 0.00 36.75 2.74
2861 3340 6.549736 TGCTTCTATGTATGCAGTAGGAAGTA 59.450 38.462 14.01 9.55 0.00 2.24
2871 3350 3.427773 GCAGTAGGAAGTAGACAAGTCCG 60.428 52.174 0.00 0.00 35.19 4.79
2888 3367 0.318120 CCGTGGCAAAAGCAGGAATT 59.682 50.000 0.00 0.00 0.00 2.17
2901 3380 2.086869 CAGGAATTCGACCACAAGCAT 58.913 47.619 0.00 0.00 0.00 3.79
2908 3387 0.952497 CGACCACAAGCATGCTGAGT 60.952 55.000 23.48 20.00 0.00 3.41
2932 3413 9.331282 AGTAGGTAATATTCATGTTTCTCTTGC 57.669 33.333 0.00 0.00 0.00 4.01
2941 3422 6.683974 TCATGTTTCTCTTGCCTATTAAGC 57.316 37.500 0.00 0.00 0.00 3.09
2968 3487 7.086685 AGGTCTAAGTGGGTCATTCTTTTTA 57.913 36.000 0.00 0.00 0.00 1.52
3084 4277 2.032054 ACGTTTACGAGTTGACGAGTCA 59.968 45.455 9.53 1.24 43.02 3.41
3182 4376 2.614057 ACTGTAGTTCACAACTTGCAGC 59.386 45.455 15.00 0.00 42.15 5.25
3243 4440 5.102953 ACTATAGAAAGTGCATTGGAGCA 57.897 39.130 6.78 0.00 43.35 4.26
3253 4450 4.274602 TGCATTGGAGCATCAATTTGTT 57.725 36.364 2.37 0.00 40.11 2.83
3351 4548 4.043184 TGGATCATATTGCTCATTGGCCTA 59.957 41.667 3.32 0.00 0.00 3.93
3416 4613 4.973168 AGACATTGCACTTCAGACCTAAA 58.027 39.130 0.00 0.00 0.00 1.85
3550 4777 1.347707 CTTACTGCAACCTGAGGGACA 59.652 52.381 2.38 0.00 36.25 4.02
3615 4847 2.892852 CAGATCTAGGGAGAGCAGAAGG 59.107 54.545 0.00 0.00 40.78 3.46
3718 4950 3.321950 CTCACTTATCCCCTCCCAATCT 58.678 50.000 0.00 0.00 0.00 2.40
3778 5045 1.946747 AGTCCTTCGACTCCTCGACTG 60.947 57.143 0.00 0.00 46.90 3.51
3882 5149 3.557595 CCCTTGACTCGTAATCAATGCTC 59.442 47.826 0.00 0.00 35.57 4.26
3883 5150 4.437239 CCTTGACTCGTAATCAATGCTCT 58.563 43.478 0.00 0.00 35.57 4.09
3884 5151 4.505922 CCTTGACTCGTAATCAATGCTCTC 59.494 45.833 0.00 0.00 35.57 3.20
3885 5152 4.718940 TGACTCGTAATCAATGCTCTCA 57.281 40.909 0.00 0.00 0.00 3.27
3886 5153 4.424626 TGACTCGTAATCAATGCTCTCAC 58.575 43.478 0.00 0.00 0.00 3.51
3887 5154 3.786635 ACTCGTAATCAATGCTCTCACC 58.213 45.455 0.00 0.00 0.00 4.02
3888 5155 3.195610 ACTCGTAATCAATGCTCTCACCA 59.804 43.478 0.00 0.00 0.00 4.17
3889 5156 3.521560 TCGTAATCAATGCTCTCACCAC 58.478 45.455 0.00 0.00 0.00 4.16
3890 5157 3.056179 TCGTAATCAATGCTCTCACCACA 60.056 43.478 0.00 0.00 0.00 4.17
3891 5158 3.684305 CGTAATCAATGCTCTCACCACAA 59.316 43.478 0.00 0.00 0.00 3.33
3892 5159 4.333649 CGTAATCAATGCTCTCACCACAAT 59.666 41.667 0.00 0.00 0.00 2.71
3893 5160 5.523552 CGTAATCAATGCTCTCACCACAATA 59.476 40.000 0.00 0.00 0.00 1.90
3894 5161 6.292542 CGTAATCAATGCTCTCACCACAATAG 60.293 42.308 0.00 0.00 0.00 1.73
3895 5162 3.273434 TCAATGCTCTCACCACAATAGC 58.727 45.455 0.00 0.00 0.00 2.97
3896 5163 3.011818 CAATGCTCTCACCACAATAGCA 58.988 45.455 0.00 0.00 46.30 3.49
3900 5167 3.691118 TGCTCTCACCACAATAGCAAATC 59.309 43.478 0.00 0.00 40.05 2.17
3933 5207 4.466133 CCGCTGGTTGTGGTTGTA 57.534 55.556 0.00 0.00 41.27 2.41
3934 5208 2.941210 CCGCTGGTTGTGGTTGTAT 58.059 52.632 0.00 0.00 41.27 2.29
3935 5209 0.521291 CCGCTGGTTGTGGTTGTATG 59.479 55.000 0.00 0.00 41.27 2.39
3937 5211 1.606668 CGCTGGTTGTGGTTGTATGTT 59.393 47.619 0.00 0.00 0.00 2.71
3939 5213 3.380142 GCTGGTTGTGGTTGTATGTTTG 58.620 45.455 0.00 0.00 0.00 2.93
3940 5214 3.181480 GCTGGTTGTGGTTGTATGTTTGT 60.181 43.478 0.00 0.00 0.00 2.83
3943 5217 5.171476 TGGTTGTGGTTGTATGTTTGTTTG 58.829 37.500 0.00 0.00 0.00 2.93
3944 5218 5.172205 GGTTGTGGTTGTATGTTTGTTTGT 58.828 37.500 0.00 0.00 0.00 2.83
3945 5219 6.071560 TGGTTGTGGTTGTATGTTTGTTTGTA 60.072 34.615 0.00 0.00 0.00 2.41
3954 5255 9.594038 GTTGTATGTTTGTTTGTATGTAGAGTG 57.406 33.333 0.00 0.00 0.00 3.51
3972 5273 7.935210 TGTAGAGTGGTAGACGACATAATCATA 59.065 37.037 0.00 0.00 0.00 2.15
3975 5276 8.516234 AGAGTGGTAGACGACATAATCATATTC 58.484 37.037 0.00 0.00 0.00 1.75
3976 5277 8.410673 AGTGGTAGACGACATAATCATATTCT 57.589 34.615 0.00 0.00 0.00 2.40
4002 5303 9.319143 TGTATTTTTGTTTGTATGTTTCCAAGG 57.681 29.630 0.00 0.00 0.00 3.61
4014 5315 5.467035 TGTTTCCAAGGATTTTCATGTCC 57.533 39.130 0.00 0.00 34.64 4.02
4015 5316 5.147032 TGTTTCCAAGGATTTTCATGTCCT 58.853 37.500 0.00 0.00 46.63 3.85
4019 5320 4.766891 TCCAAGGATTTTCATGTCCTGAAC 59.233 41.667 3.49 0.00 43.94 3.18
4021 5322 5.244626 CCAAGGATTTTCATGTCCTGAACTT 59.755 40.000 3.49 0.00 43.94 2.66
4023 5324 7.039784 CCAAGGATTTTCATGTCCTGAACTTTA 60.040 37.037 3.49 0.00 43.94 1.85
4072 5374 6.935741 AGATTTTATACAGTAATTGCGGCA 57.064 33.333 0.00 0.00 0.00 5.69
4135 5440 7.598493 GTCATATTTGCTTCCTTTGCACTTTTA 59.402 33.333 0.00 0.00 40.40 1.52
4137 5442 5.590530 TTTGCTTCCTTTGCACTTTTAGA 57.409 34.783 0.00 0.00 40.40 2.10
4146 5451 5.337009 CCTTTGCACTTTTAGATCCATGCTT 60.337 40.000 0.00 0.00 34.18 3.91
4147 5452 4.707030 TGCACTTTTAGATCCATGCTTG 57.293 40.909 0.00 0.00 34.18 4.01
4149 5454 4.523943 TGCACTTTTAGATCCATGCTTGTT 59.476 37.500 0.00 0.00 34.18 2.83
4162 5467 3.726291 TGCTTGTTTTCCTAGTTTGCC 57.274 42.857 0.00 0.00 0.00 4.52
4163 5468 3.295973 TGCTTGTTTTCCTAGTTTGCCT 58.704 40.909 0.00 0.00 0.00 4.75
4165 5470 3.317993 GCTTGTTTTCCTAGTTTGCCTCA 59.682 43.478 0.00 0.00 0.00 3.86
4170 5475 2.408271 TCCTAGTTTGCCTCATGCTG 57.592 50.000 0.00 0.00 42.00 4.41
4185 6212 3.573538 TCATGCTGCTTGGTTTTACATGT 59.426 39.130 14.55 2.69 35.92 3.21
4226 6257 6.840780 AGCCTCACATTTAGCATAAGTTTT 57.159 33.333 0.00 0.00 0.00 2.43
4228 6259 5.739161 GCCTCACATTTAGCATAAGTTTTCG 59.261 40.000 0.00 0.00 0.00 3.46
4229 6260 6.403200 GCCTCACATTTAGCATAAGTTTTCGA 60.403 38.462 0.00 0.00 0.00 3.71
4230 6261 7.526608 CCTCACATTTAGCATAAGTTTTCGAA 58.473 34.615 0.00 0.00 0.00 3.71
4231 6262 8.184192 CCTCACATTTAGCATAAGTTTTCGAAT 58.816 33.333 0.00 0.00 0.00 3.34
4232 6263 9.559958 CTCACATTTAGCATAAGTTTTCGAATT 57.440 29.630 0.00 0.00 0.00 2.17
4271 6302 0.975135 ATGTCTCAGTGTGAGCAGCT 59.025 50.000 0.00 0.00 43.95 4.24
4272 6303 0.033090 TGTCTCAGTGTGAGCAGCTG 59.967 55.000 10.11 10.11 43.95 4.24
4273 6304 0.316522 GTCTCAGTGTGAGCAGCTGA 59.683 55.000 20.43 0.00 43.95 4.26
4274 6305 1.043022 TCTCAGTGTGAGCAGCTGAA 58.957 50.000 20.43 0.00 43.95 3.02
4275 6306 1.413812 TCTCAGTGTGAGCAGCTGAAA 59.586 47.619 20.43 0.00 43.95 2.69
4302 6360 5.247084 TGCAAAAATTTCATATGCAAGCCT 58.753 33.333 14.61 0.00 43.39 4.58
4311 6369 5.173774 TCATATGCAAGCCTCGAAAATTC 57.826 39.130 0.00 0.00 0.00 2.17
4330 6388 2.333069 TCCATATGGAAGCCAGAGAGG 58.667 52.381 22.52 0.00 42.18 3.69
4331 6389 1.350351 CCATATGGAAGCCAGAGAGGG 59.650 57.143 17.49 0.00 36.75 4.30
4340 6398 0.250901 GCCAGAGAGGGTTGCAGAAA 60.251 55.000 0.00 0.00 38.09 2.52
4347 6405 1.912763 GGGTTGCAGAAATGGCCCA 60.913 57.895 0.00 0.00 36.25 5.36
4350 6408 1.136891 GGTTGCAGAAATGGCCCATAC 59.863 52.381 0.00 0.00 0.00 2.39
4357 6415 4.019174 CAGAAATGGCCCATACTCACTTT 58.981 43.478 0.00 0.00 0.00 2.66
4363 6421 8.782137 AAATGGCCCATACTCACTTTAATATT 57.218 30.769 0.00 0.00 0.00 1.28
4364 6422 7.765695 ATGGCCCATACTCACTTTAATATTG 57.234 36.000 0.00 0.00 0.00 1.90
4375 6433 7.451566 ACTCACTTTAATATTGCCTGGTCTTTT 59.548 33.333 0.00 0.00 0.00 2.27
4399 6458 1.490490 TGGTCCCAGATTCTATGTGGC 59.510 52.381 0.00 0.00 42.07 5.01
4410 6469 1.066215 TCTATGTGGCGTGCAGTTCAT 60.066 47.619 0.00 0.00 0.00 2.57
4419 6481 3.001736 GGCGTGCAGTTCATAGATTCTTC 59.998 47.826 0.00 0.00 0.00 2.87
4420 6482 3.868077 GCGTGCAGTTCATAGATTCTTCT 59.132 43.478 0.00 0.00 35.90 2.85
4421 6483 4.331168 GCGTGCAGTTCATAGATTCTTCTT 59.669 41.667 0.00 0.00 33.17 2.52
4428 6490 7.536622 GCAGTTCATAGATTCTTCTTGTGTTTG 59.463 37.037 0.00 0.00 33.17 2.93
4448 6511 7.328493 GTGTTTGTCTTGTTTCTTAACTGCTTT 59.672 33.333 0.00 0.00 35.24 3.51
4460 6523 7.534723 TCTTAACTGCTTTCTTACCTACTGA 57.465 36.000 0.00 0.00 0.00 3.41
4507 7170 3.342377 TCCGATATGTTGCAGGTTTCA 57.658 42.857 0.00 0.00 0.00 2.69
4576 7240 7.040478 TGTTGAAGATTTGGAAGACCTACAATG 60.040 37.037 0.00 0.00 37.04 2.82
4597 7262 4.009675 TGAAGTTGGTGGAGTGATAATGC 58.990 43.478 0.00 0.00 0.00 3.56
4696 7385 9.965824 CTCATTTTGTGGTACTACTTCATTTTT 57.034 29.630 10.95 0.00 0.00 1.94
4702 7391 8.597662 TGTGGTACTACTTCATTTTTGTAGTC 57.402 34.615 10.95 2.36 43.70 2.59
4752 7441 5.337578 TCTCCTTTTGTGGAAAAACCTTG 57.662 39.130 0.00 0.00 39.86 3.61
4754 7443 4.826556 TCCTTTTGTGGAAAAACCTTGTG 58.173 39.130 0.00 0.00 39.86 3.33
4755 7444 4.284746 TCCTTTTGTGGAAAAACCTTGTGT 59.715 37.500 0.00 0.00 39.86 3.72
4757 7446 8.435019 CTCCTTTTGTGGAAAAACCTTGTGTTT 61.435 37.037 0.00 0.00 39.12 2.83
4758 7447 6.651225 CCTTTTGTGGAAAAACCTTGTGTTTA 59.349 34.615 0.00 0.00 46.39 2.01
4759 7448 7.335673 CCTTTTGTGGAAAAACCTTGTGTTTAT 59.664 33.333 0.00 0.00 46.39 1.40
4764 7453 8.043710 TGTGGAAAAACCTTGTGTTTATTGAAT 58.956 29.630 0.00 0.00 46.39 2.57
4765 7454 9.535878 GTGGAAAAACCTTGTGTTTATTGAATA 57.464 29.630 0.00 0.00 46.39 1.75
4877 7646 6.866071 CATAATGAATGGATAGGGATGCCCAT 60.866 42.308 0.00 0.00 40.84 4.00
4950 7719 1.959085 CTTGTGCCGGCAGTTGAAT 59.041 52.632 33.73 0.00 0.00 2.57
4960 7729 1.977188 GCAGTTGAATTGCCGGTAAC 58.023 50.000 7.28 0.00 35.54 2.50
4962 7731 2.745281 GCAGTTGAATTGCCGGTAACTA 59.255 45.455 7.28 0.00 35.54 2.24
4970 7739 6.646267 TGAATTGCCGGTAACTATAGTTTCT 58.354 36.000 22.66 2.04 39.31 2.52
5056 7826 1.209747 ACTGCCGGGAAAAGTCTATCC 59.790 52.381 2.18 0.00 34.85 2.59
5208 7978 2.690778 GCAACGGCGCCAGAAATCT 61.691 57.895 28.98 0.00 0.00 2.40
5371 8142 7.341445 ACTTGCATAAACAAACAAGAACCTA 57.659 32.000 8.46 0.00 41.59 3.08
5399 8170 3.053831 ACGTGATAAAGGGGTTGTCAG 57.946 47.619 0.00 0.00 37.95 3.51
5434 8206 6.293735 GGTCACTTACGAGAGGAGATCTAATG 60.294 46.154 0.00 0.00 38.84 1.90
5440 8212 5.009631 ACGAGAGGAGATCTAATGGAGATG 58.990 45.833 0.00 0.00 45.48 2.90
5444 8216 7.720957 CGAGAGGAGATCTAATGGAGATGATAT 59.279 40.741 0.00 0.00 45.48 1.63
5603 8375 6.238429 GGCTTCTCTCAAGATAGCAAATTCTG 60.238 42.308 13.17 0.00 37.38 3.02
5617 8390 1.981256 ATTCTGTGGTGGGTGAACAC 58.019 50.000 0.00 0.00 40.60 3.32
5624 8397 3.391626 TGTGGTGGGTGAACACATTACTA 59.608 43.478 7.25 0.00 43.08 1.82
5651 8424 6.135290 AGCAATTGATAGAAAAGCGCATAA 57.865 33.333 11.47 0.00 0.00 1.90
5652 8425 5.973565 AGCAATTGATAGAAAAGCGCATAAC 59.026 36.000 11.47 0.00 0.00 1.89
5751 8524 8.155510 TCTACTACTATTACTCCACACATCGAT 58.844 37.037 0.00 0.00 0.00 3.59
5964 8737 2.553028 CCAAAGCTAAGCACTTCTCCCA 60.553 50.000 0.00 0.00 0.00 4.37
6004 8777 1.995376 AGTAGGCCAAACCAAACTGG 58.005 50.000 5.01 0.00 45.02 4.00
6146 8919 3.300590 CACCGCAAAAAGAATTACATCGC 59.699 43.478 0.00 0.00 0.00 4.58
6155 8928 9.941664 CAAAAAGAATTACATCGCATAGATCTT 57.058 29.630 0.00 0.00 37.52 2.40
6187 8960 5.710984 TCGAGGAGAACTTTGTATTGAGAC 58.289 41.667 0.00 0.00 0.00 3.36
6321 9096 0.985490 GATTCCCCCTCTGGCAGAGT 60.985 60.000 35.40 20.72 40.72 3.24
6323 9098 0.343372 TTCCCCCTCTGGCAGAGTAT 59.657 55.000 35.40 0.00 40.72 2.12
6353 9129 1.964552 CCAAGATGGGATCTCACTGC 58.035 55.000 0.00 0.00 39.08 4.40
6357 9133 2.324541 AGATGGGATCTCACTGCTACC 58.675 52.381 0.00 0.00 33.42 3.18
6358 9134 2.090831 AGATGGGATCTCACTGCTACCT 60.091 50.000 0.00 0.00 33.42 3.08
6359 9135 1.781786 TGGGATCTCACTGCTACCTC 58.218 55.000 0.00 0.00 0.00 3.85
6360 9136 1.289231 TGGGATCTCACTGCTACCTCT 59.711 52.381 0.00 0.00 0.00 3.69
6361 9137 2.292521 TGGGATCTCACTGCTACCTCTT 60.293 50.000 0.00 0.00 0.00 2.85
6362 9138 2.769095 GGGATCTCACTGCTACCTCTTT 59.231 50.000 0.00 0.00 0.00 2.52
6363 9139 3.198853 GGGATCTCACTGCTACCTCTTTT 59.801 47.826 0.00 0.00 0.00 2.27
6364 9140 4.406003 GGGATCTCACTGCTACCTCTTTTA 59.594 45.833 0.00 0.00 0.00 1.52
6365 9141 5.452636 GGGATCTCACTGCTACCTCTTTTAG 60.453 48.000 0.00 0.00 0.00 1.85
6366 9142 4.457834 TCTCACTGCTACCTCTTTTAGC 57.542 45.455 0.00 0.00 42.08 3.09
6368 9144 3.926616 TCACTGCTACCTCTTTTAGCAC 58.073 45.455 0.00 0.00 45.57 4.40
6369 9145 3.578716 TCACTGCTACCTCTTTTAGCACT 59.421 43.478 0.00 0.00 45.57 4.40
6370 9146 3.681897 CACTGCTACCTCTTTTAGCACTG 59.318 47.826 0.00 0.00 45.57 3.66
6371 9147 2.675348 CTGCTACCTCTTTTAGCACTGC 59.325 50.000 0.00 0.00 45.57 4.40
6372 9148 1.661112 GCTACCTCTTTTAGCACTGCG 59.339 52.381 0.00 0.00 41.48 5.18
6373 9149 2.931320 GCTACCTCTTTTAGCACTGCGT 60.931 50.000 0.00 0.00 41.48 5.24
6374 9150 2.256117 ACCTCTTTTAGCACTGCGTT 57.744 45.000 0.00 0.00 0.00 4.84
6375 9151 1.873591 ACCTCTTTTAGCACTGCGTTG 59.126 47.619 0.00 0.00 0.00 4.10
6376 9152 1.197721 CCTCTTTTAGCACTGCGTTGG 59.802 52.381 0.00 0.00 0.00 3.77
6377 9153 1.873591 CTCTTTTAGCACTGCGTTGGT 59.126 47.619 0.00 0.00 0.00 3.67
6378 9154 2.290641 CTCTTTTAGCACTGCGTTGGTT 59.709 45.455 0.00 0.00 0.00 3.67
6379 9155 2.685897 TCTTTTAGCACTGCGTTGGTTT 59.314 40.909 0.00 0.00 0.00 3.27
6380 9156 3.129638 TCTTTTAGCACTGCGTTGGTTTT 59.870 39.130 0.00 0.00 0.00 2.43
6381 9157 2.766970 TTAGCACTGCGTTGGTTTTC 57.233 45.000 0.00 0.00 0.00 2.29
6382 9158 0.948678 TAGCACTGCGTTGGTTTTCC 59.051 50.000 0.00 0.00 41.14 3.13
6383 9159 1.299850 GCACTGCGTTGGTTTTCCC 60.300 57.895 0.00 0.00 39.73 3.97
6384 9160 1.362355 CACTGCGTTGGTTTTCCCC 59.638 57.895 0.00 0.00 39.73 4.81
6385 9161 2.190841 ACTGCGTTGGTTTTCCCCG 61.191 57.895 0.00 0.00 39.73 5.73
6386 9162 1.894756 CTGCGTTGGTTTTCCCCGA 60.895 57.895 0.00 0.00 39.73 5.14
6387 9163 1.448922 CTGCGTTGGTTTTCCCCGAA 61.449 55.000 0.00 0.00 39.73 4.30
6388 9164 1.284715 GCGTTGGTTTTCCCCGAAG 59.715 57.895 0.00 0.00 39.73 3.79
6389 9165 1.167781 GCGTTGGTTTTCCCCGAAGA 61.168 55.000 0.00 0.00 39.73 2.87
6390 9166 0.872388 CGTTGGTTTTCCCCGAAGAG 59.128 55.000 0.00 0.00 39.73 2.85
6391 9167 1.244816 GTTGGTTTTCCCCGAAGAGG 58.755 55.000 0.00 0.00 39.73 3.69
6392 9168 1.142060 TTGGTTTTCCCCGAAGAGGA 58.858 50.000 0.00 0.00 39.25 3.71
6393 9169 1.142060 TGGTTTTCCCCGAAGAGGAA 58.858 50.000 0.00 0.00 44.69 3.36
6396 9172 4.147135 TTCCCCGAAGAGGAAGGG 57.853 61.111 0.00 0.00 40.31 3.95
6397 9173 1.472460 TTCCCCGAAGAGGAAGGGA 59.528 57.895 0.60 0.00 40.31 4.20
6402 9178 2.540265 CCGAAGAGGAAGGGATGATG 57.460 55.000 0.00 0.00 45.00 3.07
6403 9179 1.542108 CCGAAGAGGAAGGGATGATGC 60.542 57.143 0.00 0.00 45.00 3.91
6404 9180 1.139654 CGAAGAGGAAGGGATGATGCA 59.860 52.381 0.00 0.00 0.00 3.96
6405 9181 2.806019 CGAAGAGGAAGGGATGATGCAG 60.806 54.545 0.00 0.00 0.00 4.41
6406 9182 2.187239 AGAGGAAGGGATGATGCAGA 57.813 50.000 0.00 0.00 0.00 4.26
6407 9183 2.485659 AGAGGAAGGGATGATGCAGAA 58.514 47.619 0.00 0.00 0.00 3.02
6408 9184 2.848694 AGAGGAAGGGATGATGCAGAAA 59.151 45.455 0.00 0.00 0.00 2.52
6409 9185 3.267812 AGAGGAAGGGATGATGCAGAAAA 59.732 43.478 0.00 0.00 0.00 2.29
6410 9186 3.629087 AGGAAGGGATGATGCAGAAAAG 58.371 45.455 0.00 0.00 0.00 2.27
6411 9187 3.011032 AGGAAGGGATGATGCAGAAAAGT 59.989 43.478 0.00 0.00 0.00 2.66
6412 9188 4.228210 AGGAAGGGATGATGCAGAAAAGTA 59.772 41.667 0.00 0.00 0.00 2.24
6413 9189 4.578105 GGAAGGGATGATGCAGAAAAGTAG 59.422 45.833 0.00 0.00 0.00 2.57
6414 9190 3.549794 AGGGATGATGCAGAAAAGTAGC 58.450 45.455 0.00 0.00 0.00 3.58
6415 9191 3.054139 AGGGATGATGCAGAAAAGTAGCA 60.054 43.478 0.00 0.00 43.14 3.49
6426 9202 7.985476 TGCAGAAAAGTAGCATAAGTATTTCC 58.015 34.615 0.00 0.00 32.55 3.13
6427 9203 7.067008 TGCAGAAAAGTAGCATAAGTATTTCCC 59.933 37.037 0.00 0.00 32.55 3.97
6428 9204 7.283354 GCAGAAAAGTAGCATAAGTATTTCCCT 59.717 37.037 0.00 0.00 0.00 4.20
6429 9205 8.831550 CAGAAAAGTAGCATAAGTATTTCCCTC 58.168 37.037 0.00 0.00 0.00 4.30
6430 9206 8.548877 AGAAAAGTAGCATAAGTATTTCCCTCA 58.451 33.333 0.00 0.00 0.00 3.86
6431 9207 8.738645 AAAAGTAGCATAAGTATTTCCCTCAG 57.261 34.615 0.00 0.00 0.00 3.35
6432 9208 7.439108 AAGTAGCATAAGTATTTCCCTCAGT 57.561 36.000 0.00 0.00 0.00 3.41
6433 9209 7.439108 AGTAGCATAAGTATTTCCCTCAGTT 57.561 36.000 0.00 0.00 0.00 3.16
6434 9210 7.862675 AGTAGCATAAGTATTTCCCTCAGTTT 58.137 34.615 0.00 0.00 0.00 2.66
6435 9211 8.329502 AGTAGCATAAGTATTTCCCTCAGTTTT 58.670 33.333 0.00 0.00 0.00 2.43
6436 9212 8.957466 GTAGCATAAGTATTTCCCTCAGTTTTT 58.043 33.333 0.00 0.00 0.00 1.94
6437 9213 7.830739 AGCATAAGTATTTCCCTCAGTTTTTG 58.169 34.615 0.00 0.00 0.00 2.44
6438 9214 7.669722 AGCATAAGTATTTCCCTCAGTTTTTGA 59.330 33.333 0.00 0.00 0.00 2.69
6451 9227 6.877611 TCAGTTTTTGAGAACCAAGGTATC 57.122 37.500 0.00 0.00 35.94 2.24
6452 9228 6.361433 TCAGTTTTTGAGAACCAAGGTATCA 58.639 36.000 0.00 0.00 35.94 2.15
6453 9229 6.831353 TCAGTTTTTGAGAACCAAGGTATCAA 59.169 34.615 13.02 13.02 35.94 2.57
6454 9230 7.505585 TCAGTTTTTGAGAACCAAGGTATCAAT 59.494 33.333 16.11 4.02 35.41 2.57
6455 9231 7.809806 CAGTTTTTGAGAACCAAGGTATCAATC 59.190 37.037 16.11 11.55 35.41 2.67
6456 9232 6.834168 TTTTGAGAACCAAGGTATCAATCC 57.166 37.500 16.11 0.00 35.41 3.01
6457 9233 5.512942 TTGAGAACCAAGGTATCAATCCA 57.487 39.130 13.02 0.00 32.60 3.41
6458 9234 5.102953 TGAGAACCAAGGTATCAATCCAG 57.897 43.478 4.99 0.00 0.00 3.86
6459 9235 4.536090 TGAGAACCAAGGTATCAATCCAGT 59.464 41.667 4.99 0.00 0.00 4.00
6460 9236 5.724370 TGAGAACCAAGGTATCAATCCAGTA 59.276 40.000 4.99 0.00 0.00 2.74
6461 9237 6.127054 TGAGAACCAAGGTATCAATCCAGTAG 60.127 42.308 4.99 0.00 0.00 2.57
6462 9238 5.131142 AGAACCAAGGTATCAATCCAGTAGG 59.869 44.000 0.00 0.00 0.00 3.18
6471 9247 4.254721 TCCAGTAGGAGGCTACGC 57.745 61.111 0.00 0.00 39.61 4.42
6472 9248 1.822613 TCCAGTAGGAGGCTACGCG 60.823 63.158 3.53 3.53 39.61 6.01
6473 9249 2.026301 CAGTAGGAGGCTACGCGC 59.974 66.667 5.73 0.00 35.16 6.86
6474 9250 3.584052 AGTAGGAGGCTACGCGCG 61.584 66.667 30.96 30.96 40.44 6.86
6475 9251 3.580193 GTAGGAGGCTACGCGCGA 61.580 66.667 39.36 19.16 40.44 5.87
6476 9252 3.277602 TAGGAGGCTACGCGCGAG 61.278 66.667 39.36 27.96 40.44 5.03
6478 9254 4.908877 GGAGGCTACGCGCGAGTC 62.909 72.222 39.36 28.45 40.44 3.36
6479 9255 4.908877 GAGGCTACGCGCGAGTCC 62.909 72.222 39.36 29.73 40.44 3.85
6482 9258 4.908877 GCTACGCGCGAGTCCCTC 62.909 72.222 39.36 13.51 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 2.823196 TTGCTTGTGTGTTTGTCGAG 57.177 45.000 0.00 0.00 0.00 4.04
12 13 2.226674 TGTTTGCTTGTGTGTTTGTCGA 59.773 40.909 0.00 0.00 0.00 4.20
13 14 2.590073 TGTTTGCTTGTGTGTTTGTCG 58.410 42.857 0.00 0.00 0.00 4.35
14 15 4.233789 TCTTGTTTGCTTGTGTGTTTGTC 58.766 39.130 0.00 0.00 0.00 3.18
15 16 4.236935 CTCTTGTTTGCTTGTGTGTTTGT 58.763 39.130 0.00 0.00 0.00 2.83
16 17 3.613737 CCTCTTGTTTGCTTGTGTGTTTG 59.386 43.478 0.00 0.00 0.00 2.93
17 18 3.848726 CCTCTTGTTTGCTTGTGTGTTT 58.151 40.909 0.00 0.00 0.00 2.83
39 40 6.388259 TTTTTGTTCGTCTCTTTTTGCTTG 57.612 33.333 0.00 0.00 0.00 4.01
68 69 3.933861 ATTCGCCCTCTTTTCCACTAT 57.066 42.857 0.00 0.00 0.00 2.12
69 70 4.829872 TTATTCGCCCTCTTTTCCACTA 57.170 40.909 0.00 0.00 0.00 2.74
72 73 3.189702 CGTTTTATTCGCCCTCTTTTCCA 59.810 43.478 0.00 0.00 0.00 3.53
93 94 2.672996 CCCACTTCACCCTTGCCG 60.673 66.667 0.00 0.00 0.00 5.69
122 123 3.781079 TTATTTGCCATTTGCCTCTCG 57.219 42.857 0.00 0.00 40.16 4.04
135 136 4.829064 TCCCTCGCATTACATTATTTGC 57.171 40.909 0.00 0.00 0.00 3.68
195 196 1.136828 TAGTGGAGGTTGCACCAAGT 58.863 50.000 7.86 0.00 41.95 3.16
196 197 1.202758 TGTAGTGGAGGTTGCACCAAG 60.203 52.381 7.86 0.00 41.95 3.61
197 198 0.840617 TGTAGTGGAGGTTGCACCAA 59.159 50.000 7.86 0.00 41.95 3.67
198 199 0.107831 GTGTAGTGGAGGTTGCACCA 59.892 55.000 7.86 0.00 41.95 4.17
199 200 0.605589 GGTGTAGTGGAGGTTGCACC 60.606 60.000 0.00 0.00 39.72 5.01
200 201 0.107831 TGGTGTAGTGGAGGTTGCAC 59.892 55.000 0.00 0.00 39.13 4.57
201 202 0.107831 GTGGTGTAGTGGAGGTTGCA 59.892 55.000 0.00 0.00 0.00 4.08
202 203 0.107831 TGTGGTGTAGTGGAGGTTGC 59.892 55.000 0.00 0.00 0.00 4.17
203 204 2.218603 GTTGTGGTGTAGTGGAGGTTG 58.781 52.381 0.00 0.00 0.00 3.77
204 205 1.841277 TGTTGTGGTGTAGTGGAGGTT 59.159 47.619 0.00 0.00 0.00 3.50
205 206 1.140252 GTGTTGTGGTGTAGTGGAGGT 59.860 52.381 0.00 0.00 0.00 3.85
206 207 1.416401 AGTGTTGTGGTGTAGTGGAGG 59.584 52.381 0.00 0.00 0.00 4.30
207 208 2.910688 AGTGTTGTGGTGTAGTGGAG 57.089 50.000 0.00 0.00 0.00 3.86
208 209 4.757019 TTAAGTGTTGTGGTGTAGTGGA 57.243 40.909 0.00 0.00 0.00 4.02
209 210 6.148811 CCTAATTAAGTGTTGTGGTGTAGTGG 59.851 42.308 0.00 0.00 0.00 4.00
210 211 6.148811 CCCTAATTAAGTGTTGTGGTGTAGTG 59.851 42.308 0.00 0.00 0.00 2.74
211 212 6.235664 CCCTAATTAAGTGTTGTGGTGTAGT 58.764 40.000 0.00 0.00 0.00 2.73
212 213 5.646360 CCCCTAATTAAGTGTTGTGGTGTAG 59.354 44.000 0.00 0.00 0.00 2.74
213 214 5.073417 ACCCCTAATTAAGTGTTGTGGTGTA 59.927 40.000 0.00 0.00 0.00 2.90
214 215 4.141111 ACCCCTAATTAAGTGTTGTGGTGT 60.141 41.667 0.00 0.00 0.00 4.16
215 216 4.403734 ACCCCTAATTAAGTGTTGTGGTG 58.596 43.478 0.00 0.00 0.00 4.17
216 217 4.734843 ACCCCTAATTAAGTGTTGTGGT 57.265 40.909 0.00 0.00 0.00 4.16
217 218 5.812286 ACTACCCCTAATTAAGTGTTGTGG 58.188 41.667 0.00 0.00 0.00 4.17
218 219 8.724229 GTTAACTACCCCTAATTAAGTGTTGTG 58.276 37.037 0.00 0.00 0.00 3.33
219 220 8.663167 AGTTAACTACCCCTAATTAAGTGTTGT 58.337 33.333 6.26 0.00 0.00 3.32
220 221 8.943002 CAGTTAACTACCCCTAATTAAGTGTTG 58.057 37.037 8.04 0.00 35.01 3.33
221 222 7.609146 GCAGTTAACTACCCCTAATTAAGTGTT 59.391 37.037 8.04 0.00 38.97 3.32
222 223 7.108194 GCAGTTAACTACCCCTAATTAAGTGT 58.892 38.462 8.04 0.00 38.97 3.55
223 224 6.541278 GGCAGTTAACTACCCCTAATTAAGTG 59.459 42.308 13.27 0.00 39.41 3.16
224 225 6.631088 CGGCAGTTAACTACCCCTAATTAAGT 60.631 42.308 17.63 0.00 0.00 2.24
225 226 5.756833 CGGCAGTTAACTACCCCTAATTAAG 59.243 44.000 17.63 0.00 0.00 1.85
226 227 5.396660 CCGGCAGTTAACTACCCCTAATTAA 60.397 44.000 17.63 0.00 0.00 1.40
227 228 4.101430 CCGGCAGTTAACTACCCCTAATTA 59.899 45.833 17.63 0.00 0.00 1.40
228 229 3.118149 CCGGCAGTTAACTACCCCTAATT 60.118 47.826 17.63 0.00 0.00 1.40
229 230 2.436911 CCGGCAGTTAACTACCCCTAAT 59.563 50.000 17.63 0.00 0.00 1.73
230 231 1.832998 CCGGCAGTTAACTACCCCTAA 59.167 52.381 17.63 0.00 0.00 2.69
231 232 1.488390 CCGGCAGTTAACTACCCCTA 58.512 55.000 17.63 0.00 0.00 3.53
232 233 1.269703 CCCGGCAGTTAACTACCCCT 61.270 60.000 17.63 0.00 0.00 4.79
233 234 1.222661 CCCGGCAGTTAACTACCCC 59.777 63.158 17.63 12.59 0.00 4.95
234 235 0.177373 CTCCCGGCAGTTAACTACCC 59.823 60.000 17.63 14.77 0.00 3.69
235 236 1.188863 TCTCCCGGCAGTTAACTACC 58.811 55.000 14.14 14.14 0.00 3.18
236 237 3.323751 TTTCTCCCGGCAGTTAACTAC 57.676 47.619 8.04 1.94 0.00 2.73
237 238 4.440525 CGTATTTCTCCCGGCAGTTAACTA 60.441 45.833 8.04 0.00 0.00 2.24
238 239 3.677976 CGTATTTCTCCCGGCAGTTAACT 60.678 47.826 1.12 1.12 0.00 2.24
239 240 2.606272 CGTATTTCTCCCGGCAGTTAAC 59.394 50.000 0.00 0.00 0.00 2.01
240 241 2.234414 ACGTATTTCTCCCGGCAGTTAA 59.766 45.455 0.00 0.00 0.00 2.01
241 242 1.826720 ACGTATTTCTCCCGGCAGTTA 59.173 47.619 0.00 0.00 0.00 2.24
242 243 0.611714 ACGTATTTCTCCCGGCAGTT 59.388 50.000 0.00 0.00 0.00 3.16
243 244 1.477553 TACGTATTTCTCCCGGCAGT 58.522 50.000 0.00 0.00 0.00 4.40
244 245 2.589798 TTACGTATTTCTCCCGGCAG 57.410 50.000 0.00 0.00 0.00 4.85
245 246 2.028294 TGTTTACGTATTTCTCCCGGCA 60.028 45.455 0.00 0.00 0.00 5.69
246 247 2.620242 TGTTTACGTATTTCTCCCGGC 58.380 47.619 0.00 0.00 0.00 6.13
247 248 3.619929 CCTTGTTTACGTATTTCTCCCGG 59.380 47.826 0.00 0.00 0.00 5.73
248 249 3.619929 CCCTTGTTTACGTATTTCTCCCG 59.380 47.826 0.00 0.00 0.00 5.14
249 250 3.376234 GCCCTTGTTTACGTATTTCTCCC 59.624 47.826 0.00 0.00 0.00 4.30
250 251 4.004982 TGCCCTTGTTTACGTATTTCTCC 58.995 43.478 0.00 0.00 0.00 3.71
251 252 5.123344 ACATGCCCTTGTTTACGTATTTCTC 59.877 40.000 0.00 0.00 0.00 2.87
252 253 5.007682 ACATGCCCTTGTTTACGTATTTCT 58.992 37.500 0.00 0.00 0.00 2.52
253 254 5.092781 CACATGCCCTTGTTTACGTATTTC 58.907 41.667 0.00 0.00 0.00 2.17
254 255 4.762765 TCACATGCCCTTGTTTACGTATTT 59.237 37.500 0.00 0.00 0.00 1.40
255 256 4.328536 TCACATGCCCTTGTTTACGTATT 58.671 39.130 0.00 0.00 0.00 1.89
256 257 3.945346 TCACATGCCCTTGTTTACGTAT 58.055 40.909 0.00 0.00 0.00 3.06
257 258 3.404224 TCACATGCCCTTGTTTACGTA 57.596 42.857 0.00 0.00 0.00 3.57
258 259 2.264005 TCACATGCCCTTGTTTACGT 57.736 45.000 0.00 0.00 0.00 3.57
259 260 2.552315 AGTTCACATGCCCTTGTTTACG 59.448 45.455 0.00 0.00 0.00 3.18
260 261 3.857010 GCAGTTCACATGCCCTTGTTTAC 60.857 47.826 0.00 0.00 37.73 2.01
261 262 2.295909 GCAGTTCACATGCCCTTGTTTA 59.704 45.455 0.00 0.00 37.73 2.01
262 263 1.069049 GCAGTTCACATGCCCTTGTTT 59.931 47.619 0.00 0.00 37.73 2.83
263 264 0.675633 GCAGTTCACATGCCCTTGTT 59.324 50.000 0.00 0.00 37.73 2.83
264 265 2.344535 GCAGTTCACATGCCCTTGT 58.655 52.632 0.00 0.00 37.73 3.16
270 271 1.210155 GTTCCGGCAGTTCACATGC 59.790 57.895 0.00 0.00 43.09 4.06
271 272 0.950836 TTGTTCCGGCAGTTCACATG 59.049 50.000 0.00 0.00 0.00 3.21
272 273 1.238439 CTTGTTCCGGCAGTTCACAT 58.762 50.000 0.00 0.00 0.00 3.21
273 274 0.107410 ACTTGTTCCGGCAGTTCACA 60.107 50.000 0.00 0.00 0.00 3.58
274 275 1.873698 TACTTGTTCCGGCAGTTCAC 58.126 50.000 0.00 0.00 0.00 3.18
275 276 2.301870 AGATACTTGTTCCGGCAGTTCA 59.698 45.455 0.00 0.00 0.00 3.18
276 277 2.930682 GAGATACTTGTTCCGGCAGTTC 59.069 50.000 0.00 0.00 0.00 3.01
277 278 2.301870 TGAGATACTTGTTCCGGCAGTT 59.698 45.455 0.00 0.00 0.00 3.16
278 279 1.899814 TGAGATACTTGTTCCGGCAGT 59.100 47.619 0.00 0.00 0.00 4.40
279 280 2.544685 CTGAGATACTTGTTCCGGCAG 58.455 52.381 0.00 0.00 0.00 4.85
280 281 1.207089 CCTGAGATACTTGTTCCGGCA 59.793 52.381 0.00 0.00 0.00 5.69
281 282 1.473434 CCCTGAGATACTTGTTCCGGC 60.473 57.143 0.00 0.00 0.00 6.13
282 283 1.473434 GCCCTGAGATACTTGTTCCGG 60.473 57.143 0.00 0.00 0.00 5.14
283 284 1.207089 TGCCCTGAGATACTTGTTCCG 59.793 52.381 0.00 0.00 0.00 4.30
284 285 3.567478 ATGCCCTGAGATACTTGTTCC 57.433 47.619 0.00 0.00 0.00 3.62
285 286 4.345257 TCCTATGCCCTGAGATACTTGTTC 59.655 45.833 0.00 0.00 0.00 3.18
286 287 4.298626 TCCTATGCCCTGAGATACTTGTT 58.701 43.478 0.00 0.00 0.00 2.83
287 288 3.928754 TCCTATGCCCTGAGATACTTGT 58.071 45.455 0.00 0.00 0.00 3.16
288 289 4.346418 AGTTCCTATGCCCTGAGATACTTG 59.654 45.833 0.00 0.00 0.00 3.16
289 290 4.346418 CAGTTCCTATGCCCTGAGATACTT 59.654 45.833 0.00 0.00 0.00 2.24
290 291 3.900601 CAGTTCCTATGCCCTGAGATACT 59.099 47.826 0.00 0.00 0.00 2.12
291 292 3.556004 GCAGTTCCTATGCCCTGAGATAC 60.556 52.174 0.00 0.00 37.73 2.24
292 293 2.634940 GCAGTTCCTATGCCCTGAGATA 59.365 50.000 0.00 0.00 37.73 1.98
293 294 1.419387 GCAGTTCCTATGCCCTGAGAT 59.581 52.381 0.00 0.00 37.73 2.75
294 295 0.833287 GCAGTTCCTATGCCCTGAGA 59.167 55.000 0.00 0.00 37.73 3.27
295 296 3.393472 GCAGTTCCTATGCCCTGAG 57.607 57.895 0.00 0.00 37.73 3.35
301 302 2.596904 TCTAACGGCAGTTCCTATGC 57.403 50.000 5.22 0.00 41.49 3.14
302 303 4.124851 AGTTCTAACGGCAGTTCCTATG 57.875 45.455 5.22 0.00 41.49 2.23
303 304 4.222145 TCAAGTTCTAACGGCAGTTCCTAT 59.778 41.667 5.22 0.00 41.49 2.57
304 305 3.575256 TCAAGTTCTAACGGCAGTTCCTA 59.425 43.478 5.22 0.00 41.49 2.94
305 306 2.367567 TCAAGTTCTAACGGCAGTTCCT 59.632 45.455 5.22 0.00 41.49 3.36
306 307 2.737252 CTCAAGTTCTAACGGCAGTTCC 59.263 50.000 5.22 0.00 41.49 3.62
307 308 2.157863 GCTCAAGTTCTAACGGCAGTTC 59.842 50.000 5.22 0.00 41.49 3.01
308 309 2.143925 GCTCAAGTTCTAACGGCAGTT 58.856 47.619 7.54 7.54 43.95 3.16
309 310 1.070134 TGCTCAAGTTCTAACGGCAGT 59.930 47.619 0.00 0.00 0.00 4.40
310 311 1.795768 TGCTCAAGTTCTAACGGCAG 58.204 50.000 0.00 0.00 0.00 4.85
311 312 2.248280 TTGCTCAAGTTCTAACGGCA 57.752 45.000 0.00 0.00 0.00 5.69
312 313 2.729156 GCATTGCTCAAGTTCTAACGGC 60.729 50.000 0.16 0.00 0.00 5.68
313 314 2.474526 CGCATTGCTCAAGTTCTAACGG 60.475 50.000 7.12 0.00 0.00 4.44
314 315 2.474526 CCGCATTGCTCAAGTTCTAACG 60.475 50.000 7.12 0.00 0.00 3.18
315 316 2.159517 CCCGCATTGCTCAAGTTCTAAC 60.160 50.000 7.12 0.00 0.00 2.34
316 317 2.083774 CCCGCATTGCTCAAGTTCTAA 58.916 47.619 7.12 0.00 0.00 2.10
317 318 1.737838 CCCGCATTGCTCAAGTTCTA 58.262 50.000 7.12 0.00 0.00 2.10
318 319 1.589716 GCCCGCATTGCTCAAGTTCT 61.590 55.000 7.12 0.00 0.00 3.01
319 320 1.153958 GCCCGCATTGCTCAAGTTC 60.154 57.895 7.12 0.00 0.00 3.01
320 321 1.902918 TGCCCGCATTGCTCAAGTT 60.903 52.632 7.12 0.00 0.00 2.66
321 322 2.282391 TGCCCGCATTGCTCAAGT 60.282 55.556 7.12 0.00 0.00 3.16
322 323 2.180017 GTGCCCGCATTGCTCAAG 59.820 61.111 7.12 0.00 0.00 3.02
323 324 3.372730 GGTGCCCGCATTGCTCAA 61.373 61.111 7.12 0.00 0.00 3.02
324 325 2.476852 TAAGGTGCCCGCATTGCTCA 62.477 55.000 7.12 0.00 0.00 4.26
325 326 1.103398 ATAAGGTGCCCGCATTGCTC 61.103 55.000 7.12 0.00 0.00 4.26
326 327 1.076777 ATAAGGTGCCCGCATTGCT 60.077 52.632 7.12 0.00 0.00 3.91
327 328 1.103398 AGATAAGGTGCCCGCATTGC 61.103 55.000 0.00 0.00 0.00 3.56
328 329 0.664761 CAGATAAGGTGCCCGCATTG 59.335 55.000 0.00 0.00 0.00 2.82
329 330 1.103398 GCAGATAAGGTGCCCGCATT 61.103 55.000 0.00 0.00 34.67 3.56
330 331 1.526917 GCAGATAAGGTGCCCGCAT 60.527 57.895 0.00 0.00 34.67 4.73
331 332 2.124736 GCAGATAAGGTGCCCGCA 60.125 61.111 0.00 0.00 34.67 5.69
336 337 2.032680 TTTACCGGCAGATAAGGTGC 57.967 50.000 0.00 0.00 38.90 5.01
337 338 6.238648 CCTTAAATTTACCGGCAGATAAGGTG 60.239 42.308 16.98 1.34 38.90 4.00
338 339 5.826208 CCTTAAATTTACCGGCAGATAAGGT 59.174 40.000 16.98 0.00 41.73 3.50
339 340 5.240844 CCCTTAAATTTACCGGCAGATAAGG 59.759 44.000 17.75 17.75 38.44 2.69
340 341 5.278315 GCCCTTAAATTTACCGGCAGATAAG 60.278 44.000 21.82 3.42 36.38 1.73
341 342 4.581409 GCCCTTAAATTTACCGGCAGATAA 59.419 41.667 21.82 0.00 36.38 1.75
342 343 4.139038 GCCCTTAAATTTACCGGCAGATA 58.861 43.478 21.82 0.00 36.38 1.98
343 344 2.956333 GCCCTTAAATTTACCGGCAGAT 59.044 45.455 21.82 0.00 36.38 2.90
344 345 2.291024 TGCCCTTAAATTTACCGGCAGA 60.291 45.455 24.09 10.34 41.31 4.26
345 346 2.096248 TGCCCTTAAATTTACCGGCAG 58.904 47.619 24.09 9.25 41.31 4.85
346 347 1.819903 GTGCCCTTAAATTTACCGGCA 59.180 47.619 24.09 24.09 43.84 5.69
347 348 1.819903 TGTGCCCTTAAATTTACCGGC 59.180 47.619 20.67 20.67 36.91 6.13
348 349 3.697045 TGATGTGCCCTTAAATTTACCGG 59.303 43.478 0.00 0.00 0.00 5.28
349 350 4.974368 TGATGTGCCCTTAAATTTACCG 57.026 40.909 0.00 0.00 0.00 4.02
350 351 6.507023 CAGATGATGTGCCCTTAAATTTACC 58.493 40.000 0.00 0.00 0.00 2.85
351 352 5.979517 GCAGATGATGTGCCCTTAAATTTAC 59.020 40.000 2.74 0.00 34.67 2.01
352 353 6.147864 GCAGATGATGTGCCCTTAAATTTA 57.852 37.500 2.74 0.00 34.67 1.40
353 354 5.014808 GCAGATGATGTGCCCTTAAATTT 57.985 39.130 2.74 0.00 34.67 1.82
354 355 4.660789 GCAGATGATGTGCCCTTAAATT 57.339 40.909 2.74 0.00 34.67 1.82
363 364 2.182842 GTCCCGGCAGATGATGTGC 61.183 63.158 5.94 5.94 40.42 4.57
364 365 0.392863 TTGTCCCGGCAGATGATGTG 60.393 55.000 0.00 0.00 0.00 3.21
365 366 0.392998 GTTGTCCCGGCAGATGATGT 60.393 55.000 0.00 0.00 0.00 3.06
366 367 0.107508 AGTTGTCCCGGCAGATGATG 60.108 55.000 0.00 0.00 0.00 3.07
367 368 1.496060 TAGTTGTCCCGGCAGATGAT 58.504 50.000 0.00 0.00 0.00 2.45
368 369 1.271856 TTAGTTGTCCCGGCAGATGA 58.728 50.000 0.00 0.00 0.00 2.92
369 370 2.107950 TTTAGTTGTCCCGGCAGATG 57.892 50.000 0.00 0.00 0.00 2.90
370 371 2.741878 CGATTTAGTTGTCCCGGCAGAT 60.742 50.000 0.00 0.00 0.00 2.90
371 372 1.404986 CGATTTAGTTGTCCCGGCAGA 60.405 52.381 0.00 0.00 0.00 4.26
372 373 1.006832 CGATTTAGTTGTCCCGGCAG 58.993 55.000 0.00 0.00 0.00 4.85
373 374 0.322322 ACGATTTAGTTGTCCCGGCA 59.678 50.000 0.00 0.00 0.00 5.69
374 375 0.725117 CACGATTTAGTTGTCCCGGC 59.275 55.000 0.00 0.00 0.00 6.13
375 376 1.365699 CCACGATTTAGTTGTCCCGG 58.634 55.000 0.00 0.00 0.00 5.73
376 377 0.725117 GCCACGATTTAGTTGTCCCG 59.275 55.000 0.00 0.00 0.00 5.14
377 378 2.109425 AGCCACGATTTAGTTGTCCC 57.891 50.000 0.00 0.00 0.00 4.46
378 379 3.335579 AGAAGCCACGATTTAGTTGTCC 58.664 45.455 0.00 0.00 0.00 4.02
379 380 6.535508 AGATTAGAAGCCACGATTTAGTTGTC 59.464 38.462 0.00 0.00 0.00 3.18
380 381 6.313905 CAGATTAGAAGCCACGATTTAGTTGT 59.686 38.462 0.00 0.00 0.00 3.32
381 382 6.709643 CAGATTAGAAGCCACGATTTAGTTG 58.290 40.000 0.00 0.00 0.00 3.16
382 383 5.294552 GCAGATTAGAAGCCACGATTTAGTT 59.705 40.000 0.00 0.00 0.00 2.24
383 384 4.811557 GCAGATTAGAAGCCACGATTTAGT 59.188 41.667 0.00 0.00 0.00 2.24
384 385 5.335827 GCAGATTAGAAGCCACGATTTAG 57.664 43.478 0.00 0.00 0.00 1.85
393 394 0.753262 TCCTCGGCAGATTAGAAGCC 59.247 55.000 0.00 0.00 44.89 4.35
394 395 1.539280 GGTCCTCGGCAGATTAGAAGC 60.539 57.143 0.00 0.00 0.00 3.86
395 396 1.269309 CGGTCCTCGGCAGATTAGAAG 60.269 57.143 0.00 0.00 34.75 2.85
396 397 0.744874 CGGTCCTCGGCAGATTAGAA 59.255 55.000 0.00 0.00 34.75 2.10
397 398 0.395311 ACGGTCCTCGGCAGATTAGA 60.395 55.000 0.00 0.00 44.45 2.10
398 399 2.116383 ACGGTCCTCGGCAGATTAG 58.884 57.895 0.00 0.00 44.45 1.73
399 400 3.757059 AGGACGGTCCTCGGCAGATTA 62.757 57.143 23.90 0.00 45.66 1.75
401 402 3.663815 AGGACGGTCCTCGGCAGAT 62.664 63.158 23.90 0.00 45.66 2.90
402 403 4.361971 AGGACGGTCCTCGGCAGA 62.362 66.667 23.90 0.00 45.66 4.26
403 404 4.135153 CAGGACGGTCCTCGGCAG 62.135 72.222 26.53 11.63 45.66 4.85
406 407 3.450115 GTCCAGGACGGTCCTCGG 61.450 72.222 26.53 26.62 45.66 4.63
407 408 3.812019 CGTCCAGGACGGTCCTCG 61.812 72.222 31.37 21.98 45.66 4.63
415 416 4.436998 CGGCCTCACGTCCAGGAC 62.437 72.222 9.92 9.92 35.37 3.85
416 417 4.671590 TCGGCCTCACGTCCAGGA 62.672 66.667 13.42 0.00 31.91 3.86
417 418 1.672854 TATTCGGCCTCACGTCCAGG 61.673 60.000 0.00 5.79 34.94 4.45
418 419 0.249073 CTATTCGGCCTCACGTCCAG 60.249 60.000 0.00 0.00 34.94 3.86
419 420 1.813859 CTATTCGGCCTCACGTCCA 59.186 57.895 0.00 0.00 34.94 4.02
420 421 1.591863 GCTATTCGGCCTCACGTCC 60.592 63.158 0.00 0.00 34.94 4.79
421 422 0.249489 ATGCTATTCGGCCTCACGTC 60.249 55.000 0.00 0.00 34.94 4.34
422 423 0.249489 GATGCTATTCGGCCTCACGT 60.249 55.000 0.00 0.00 34.94 4.49
423 424 1.278172 CGATGCTATTCGGCCTCACG 61.278 60.000 0.00 0.00 35.50 4.35
424 425 2.522060 CGATGCTATTCGGCCTCAC 58.478 57.895 0.00 0.00 35.50 3.51
431 432 2.159653 GCTTTATGGCCGATGCTATTCG 60.160 50.000 0.00 0.00 39.64 3.34
432 433 2.159653 CGCTTTATGGCCGATGCTATTC 60.160 50.000 0.00 0.00 39.64 1.75
433 434 1.806542 CGCTTTATGGCCGATGCTATT 59.193 47.619 0.00 0.00 39.64 1.73
434 435 1.442769 CGCTTTATGGCCGATGCTAT 58.557 50.000 0.00 0.00 42.00 2.97
435 436 1.227999 GCGCTTTATGGCCGATGCTA 61.228 55.000 0.00 0.00 37.74 3.49
436 437 2.546494 GCGCTTTATGGCCGATGCT 61.546 57.895 0.00 0.00 37.74 3.79
437 438 2.050985 GCGCTTTATGGCCGATGC 60.051 61.111 0.00 0.00 0.00 3.91
438 439 2.249309 CGCGCTTTATGGCCGATG 59.751 61.111 5.56 0.00 0.00 3.84
439 440 3.649986 GCGCGCTTTATGGCCGAT 61.650 61.111 26.67 0.00 0.00 4.18
454 455 4.896829 TCTCCCCTCCCTAGCGCG 62.897 72.222 0.00 0.00 0.00 6.86
455 456 2.915137 CTCTCCCCTCCCTAGCGC 60.915 72.222 0.00 0.00 0.00 5.92
456 457 2.915137 GCTCTCCCCTCCCTAGCG 60.915 72.222 0.00 0.00 0.00 4.26
457 458 2.915137 CGCTCTCCCCTCCCTAGC 60.915 72.222 0.00 0.00 0.00 3.42
458 459 2.915137 GCGCTCTCCCCTCCCTAG 60.915 72.222 0.00 0.00 0.00 3.02
459 460 4.896829 CGCGCTCTCCCCTCCCTA 62.897 72.222 5.56 0.00 0.00 3.53
467 468 4.897856 GTCTCTCGCGCGCTCTCC 62.898 72.222 30.48 8.98 0.00 3.71
468 469 3.669036 TTGTCTCTCGCGCGCTCTC 62.669 63.158 30.48 14.29 0.00 3.20
469 470 2.749110 TTTTGTCTCTCGCGCGCTCT 62.749 55.000 30.48 0.00 0.00 4.09
470 471 1.687494 ATTTTGTCTCTCGCGCGCTC 61.687 55.000 30.48 13.19 0.00 5.03
471 472 1.291877 AATTTTGTCTCTCGCGCGCT 61.292 50.000 30.48 1.65 0.00 5.92
472 473 0.452784 AAATTTTGTCTCTCGCGCGC 60.453 50.000 27.95 23.91 0.00 6.86
473 474 1.950472 AAAATTTTGTCTCTCGCGCG 58.050 45.000 26.76 26.76 0.00 6.86
474 475 2.405025 CCAAAAATTTTGTCTCTCGCGC 59.595 45.455 16.15 0.00 0.00 6.86
475 476 3.628017 ACCAAAAATTTTGTCTCTCGCG 58.372 40.909 16.15 0.00 0.00 5.87
476 477 3.981416 GGACCAAAAATTTTGTCTCTCGC 59.019 43.478 16.15 2.03 34.36 5.03
477 478 5.181690 TGGACCAAAAATTTTGTCTCTCG 57.818 39.130 16.15 3.67 34.36 4.04
478 479 7.841915 TTTTGGACCAAAAATTTTGTCTCTC 57.158 32.000 26.58 6.08 39.85 3.20
479 480 9.898152 TTATTTTGGACCAAAAATTTTGTCTCT 57.102 25.926 30.86 15.81 44.68 3.10
496 497 3.303461 CGCGCGTCCATAATTATTTTGGA 60.303 43.478 24.19 12.04 37.20 3.53
497 498 2.970609 CGCGCGTCCATAATTATTTTGG 59.029 45.455 24.19 7.91 0.00 3.28
498 499 2.970609 CCGCGCGTCCATAATTATTTTG 59.029 45.455 29.95 2.81 0.00 2.44
499 500 2.031508 CCCGCGCGTCCATAATTATTTT 60.032 45.455 29.95 0.00 0.00 1.82
500 501 1.533731 CCCGCGCGTCCATAATTATTT 59.466 47.619 29.95 0.00 0.00 1.40
501 502 1.153353 CCCGCGCGTCCATAATTATT 58.847 50.000 29.95 0.00 0.00 1.40
502 503 1.296056 GCCCGCGCGTCCATAATTAT 61.296 55.000 29.95 0.00 0.00 1.28
503 504 1.957186 GCCCGCGCGTCCATAATTA 60.957 57.895 29.95 0.00 0.00 1.40
504 505 3.276846 GCCCGCGCGTCCATAATT 61.277 61.111 29.95 0.00 0.00 1.40
518 519 3.585525 GACTTTGGGTGGAGGGCCC 62.586 68.421 16.46 16.46 46.26 5.80
519 520 2.035783 GACTTTGGGTGGAGGGCC 59.964 66.667 0.00 0.00 0.00 5.80
520 521 1.303643 CTGACTTTGGGTGGAGGGC 60.304 63.158 0.00 0.00 0.00 5.19
521 522 1.303643 GCTGACTTTGGGTGGAGGG 60.304 63.158 0.00 0.00 0.00 4.30
522 523 1.672356 CGCTGACTTTGGGTGGAGG 60.672 63.158 0.00 0.00 0.00 4.30
523 524 0.951040 GTCGCTGACTTTGGGTGGAG 60.951 60.000 2.10 0.00 0.00 3.86
524 525 1.070786 GTCGCTGACTTTGGGTGGA 59.929 57.895 2.10 0.00 0.00 4.02
525 526 0.817634 TTGTCGCTGACTTTGGGTGG 60.818 55.000 9.49 0.00 33.15 4.61
526 527 0.307760 GTTGTCGCTGACTTTGGGTG 59.692 55.000 9.49 0.00 33.15 4.61
527 528 0.818040 GGTTGTCGCTGACTTTGGGT 60.818 55.000 9.49 0.00 33.15 4.51
528 529 0.535102 AGGTTGTCGCTGACTTTGGG 60.535 55.000 9.49 0.00 33.15 4.12
529 530 0.868406 GAGGTTGTCGCTGACTTTGG 59.132 55.000 9.49 0.00 33.15 3.28
530 531 0.868406 GGAGGTTGTCGCTGACTTTG 59.132 55.000 9.49 0.00 33.15 2.77
531 532 0.250338 GGGAGGTTGTCGCTGACTTT 60.250 55.000 9.49 0.00 35.21 2.66
532 533 1.371558 GGGAGGTTGTCGCTGACTT 59.628 57.895 9.49 0.00 35.21 3.01
533 534 2.584391 GGGGAGGTTGTCGCTGACT 61.584 63.158 9.49 0.00 38.22 3.41
534 535 2.047179 GGGGAGGTTGTCGCTGAC 60.047 66.667 2.32 2.32 38.22 3.51
535 536 2.203788 AGGGGAGGTTGTCGCTGA 60.204 61.111 0.00 0.00 38.22 4.26
536 537 2.266055 GAGGGGAGGTTGTCGCTG 59.734 66.667 0.00 0.00 38.22 5.18
537 538 3.003763 GGAGGGGAGGTTGTCGCT 61.004 66.667 0.00 0.00 38.22 4.93
538 539 2.406002 TTTGGAGGGGAGGTTGTCGC 62.406 60.000 0.00 0.00 37.39 5.19
539 540 0.109723 TTTTGGAGGGGAGGTTGTCG 59.890 55.000 0.00 0.00 0.00 4.35
540 541 2.158519 TCTTTTTGGAGGGGAGGTTGTC 60.159 50.000 0.00 0.00 0.00 3.18
541 542 1.856920 TCTTTTTGGAGGGGAGGTTGT 59.143 47.619 0.00 0.00 0.00 3.32
542 543 2.675658 TCTTTTTGGAGGGGAGGTTG 57.324 50.000 0.00 0.00 0.00 3.77
543 544 3.699025 TTTCTTTTTGGAGGGGAGGTT 57.301 42.857 0.00 0.00 0.00 3.50
544 545 3.699025 TTTTCTTTTTGGAGGGGAGGT 57.301 42.857 0.00 0.00 0.00 3.85
563 564 1.892209 CGGCTGTGACCTAGGTTTTT 58.108 50.000 17.53 0.00 0.00 1.94
564 565 0.605589 GCGGCTGTGACCTAGGTTTT 60.606 55.000 17.53 0.00 0.00 2.43
565 566 1.003718 GCGGCTGTGACCTAGGTTT 60.004 57.895 17.53 0.00 0.00 3.27
566 567 2.663196 GCGGCTGTGACCTAGGTT 59.337 61.111 17.53 0.00 0.00 3.50
567 568 3.391382 GGCGGCTGTGACCTAGGT 61.391 66.667 16.26 16.26 0.00 3.08
568 569 4.162690 GGGCGGCTGTGACCTAGG 62.163 72.222 7.41 7.41 0.00 3.02
569 570 4.162690 GGGGCGGCTGTGACCTAG 62.163 72.222 9.56 0.00 0.00 3.02
573 574 4.966787 TTTGGGGGCGGCTGTGAC 62.967 66.667 9.56 0.00 0.00 3.67
574 575 3.936772 GATTTGGGGGCGGCTGTGA 62.937 63.158 9.56 0.00 0.00 3.58
575 576 2.550699 TAGATTTGGGGGCGGCTGTG 62.551 60.000 9.56 0.00 0.00 3.66
576 577 2.305607 TAGATTTGGGGGCGGCTGT 61.306 57.895 9.56 0.00 0.00 4.40
577 578 1.823899 GTAGATTTGGGGGCGGCTG 60.824 63.158 9.56 0.00 0.00 4.85
578 579 1.645402 ATGTAGATTTGGGGGCGGCT 61.645 55.000 9.56 0.00 0.00 5.52
579 580 1.152756 ATGTAGATTTGGGGGCGGC 60.153 57.895 0.00 0.00 0.00 6.53
580 581 0.537371 GGATGTAGATTTGGGGGCGG 60.537 60.000 0.00 0.00 0.00 6.13
581 582 0.537371 GGGATGTAGATTTGGGGGCG 60.537 60.000 0.00 0.00 0.00 6.13
582 583 0.537371 CGGGATGTAGATTTGGGGGC 60.537 60.000 0.00 0.00 0.00 5.80
583 584 1.136828 TCGGGATGTAGATTTGGGGG 58.863 55.000 0.00 0.00 0.00 5.40
584 585 2.290323 GGATCGGGATGTAGATTTGGGG 60.290 54.545 0.00 0.00 0.00 4.96
585 586 2.371841 TGGATCGGGATGTAGATTTGGG 59.628 50.000 0.00 0.00 0.00 4.12
586 587 3.403038 GTGGATCGGGATGTAGATTTGG 58.597 50.000 0.00 0.00 0.00 3.28
587 588 3.403038 GGTGGATCGGGATGTAGATTTG 58.597 50.000 0.00 0.00 0.00 2.32
588 589 2.372172 GGGTGGATCGGGATGTAGATTT 59.628 50.000 0.00 0.00 0.00 2.17
589 590 1.978580 GGGTGGATCGGGATGTAGATT 59.021 52.381 0.00 0.00 0.00 2.40
590 591 1.645710 GGGTGGATCGGGATGTAGAT 58.354 55.000 0.00 0.00 0.00 1.98
717 718 0.252375 TTGGGTAGTTAGGGGCGACT 60.252 55.000 0.00 0.00 0.00 4.18
761 762 2.770904 ACAGTGGTGGTCCGGGTT 60.771 61.111 0.00 0.00 36.30 4.11
792 796 3.073101 GGAGGGTAGTCGCCGGTT 61.073 66.667 1.90 0.00 0.00 4.44
795 799 3.584052 CGAGGAGGGTAGTCGCCG 61.584 72.222 0.00 0.00 0.00 6.46
802 806 1.120530 GAAGGCATTCGAGGAGGGTA 58.879 55.000 0.00 0.00 0.00 3.69
1028 1032 3.384789 CACCCATCTCATCCGAAGAACTA 59.615 47.826 0.00 0.00 0.00 2.24
1309 1328 4.551388 AGTAAAACTCAGACAAGAGAGCG 58.449 43.478 0.00 0.00 38.98 5.03
1448 1643 2.159114 TGTGAAGGAAAAAGGCAAGTGC 60.159 45.455 0.00 0.00 41.14 4.40
1449 1644 3.799281 TGTGAAGGAAAAAGGCAAGTG 57.201 42.857 0.00 0.00 0.00 3.16
1621 1851 2.297701 AGGCATACAAATAAGCCACCG 58.702 47.619 5.01 0.00 45.88 4.94
1631 1861 6.350864 CCATCCACATTTGTTAGGCATACAAA 60.351 38.462 16.11 16.11 46.12 2.83
1632 1862 5.126869 CCATCCACATTTGTTAGGCATACAA 59.873 40.000 0.98 0.98 33.92 2.41
1633 1863 4.644234 CCATCCACATTTGTTAGGCATACA 59.356 41.667 0.00 0.00 0.00 2.29
1634 1864 4.037923 CCCATCCACATTTGTTAGGCATAC 59.962 45.833 0.00 0.00 0.00 2.39
1635 1865 4.214310 CCCATCCACATTTGTTAGGCATA 58.786 43.478 0.00 0.00 0.00 3.14
1636 1866 3.033184 CCCATCCACATTTGTTAGGCAT 58.967 45.455 0.00 0.00 0.00 4.40
1637 1867 2.455557 CCCATCCACATTTGTTAGGCA 58.544 47.619 0.00 0.00 0.00 4.75
1638 1868 1.136891 GCCCATCCACATTTGTTAGGC 59.863 52.381 0.00 0.00 0.00 3.93
1639 1869 2.738743 AGCCCATCCACATTTGTTAGG 58.261 47.619 0.00 0.00 0.00 2.69
1640 1870 4.019174 AGAAGCCCATCCACATTTGTTAG 58.981 43.478 0.00 0.00 0.00 2.34
1641 1871 4.046286 AGAAGCCCATCCACATTTGTTA 57.954 40.909 0.00 0.00 0.00 2.41
1642 1872 2.893424 AGAAGCCCATCCACATTTGTT 58.107 42.857 0.00 0.00 0.00 2.83
1643 1873 2.610438 AGAAGCCCATCCACATTTGT 57.390 45.000 0.00 0.00 0.00 2.83
1644 1874 2.360165 GCTAGAAGCCCATCCACATTTG 59.640 50.000 0.00 0.00 34.48 2.32
1645 1875 2.659428 GCTAGAAGCCCATCCACATTT 58.341 47.619 0.00 0.00 34.48 2.32
1646 1876 2.355010 GCTAGAAGCCCATCCACATT 57.645 50.000 0.00 0.00 34.48 2.71
1657 1887 0.107945 CTGACCACTGGGCTAGAAGC 60.108 60.000 4.33 0.00 41.46 3.86
1658 1888 0.107945 GCTGACCACTGGGCTAGAAG 60.108 60.000 4.33 0.00 37.90 2.85
1659 1889 1.888436 CGCTGACCACTGGGCTAGAA 61.888 60.000 4.33 0.00 37.90 2.10
1660 1890 2.351244 CGCTGACCACTGGGCTAGA 61.351 63.158 4.33 0.00 37.90 2.43
1661 1891 1.888436 TTCGCTGACCACTGGGCTAG 61.888 60.000 1.57 0.00 37.90 3.42
1662 1892 1.911269 TTCGCTGACCACTGGGCTA 60.911 57.895 1.57 0.00 37.90 3.93
1663 1893 3.241530 TTCGCTGACCACTGGGCT 61.242 61.111 1.57 0.00 37.90 5.19
1664 1894 3.050275 GTTCGCTGACCACTGGGC 61.050 66.667 0.00 0.00 37.90 5.36
1665 1895 2.738521 CGTTCGCTGACCACTGGG 60.739 66.667 0.00 0.00 41.29 4.45
1666 1896 2.738521 CCGTTCGCTGACCACTGG 60.739 66.667 0.00 0.00 0.00 4.00
1667 1897 3.414700 GCCGTTCGCTGACCACTG 61.415 66.667 0.00 0.00 0.00 3.66
1676 1906 4.077188 GCTCACACAGCCGTTCGC 62.077 66.667 0.00 0.00 43.17 4.70
1684 1914 2.740055 GTCGGCCAGCTCACACAG 60.740 66.667 2.24 0.00 0.00 3.66
1685 1915 4.662961 CGTCGGCCAGCTCACACA 62.663 66.667 2.24 0.00 0.00 3.72
1698 1928 4.379243 AGGCTCCAACCTGCGTCG 62.379 66.667 0.00 0.00 39.13 5.12
1699 1929 2.435059 GAGGCTCCAACCTGCGTC 60.435 66.667 2.15 0.00 41.32 5.19
1700 1930 4.379243 CGAGGCTCCAACCTGCGT 62.379 66.667 9.32 0.00 41.32 5.24
1712 1942 2.409651 CAGAGTACGAGCCGAGGC 59.590 66.667 5.89 5.89 42.33 4.70
1713 1943 2.115911 AGCAGAGTACGAGCCGAGG 61.116 63.158 1.50 0.00 0.00 4.63
1714 1944 1.063327 CAGCAGAGTACGAGCCGAG 59.937 63.158 1.50 0.00 0.00 4.63
1715 1945 1.645704 GACAGCAGAGTACGAGCCGA 61.646 60.000 1.50 0.00 0.00 5.54
1716 1946 1.226435 GACAGCAGAGTACGAGCCG 60.226 63.158 0.00 0.00 0.00 5.52
1717 1947 0.099791 GAGACAGCAGAGTACGAGCC 59.900 60.000 0.00 0.00 0.00 4.70
1718 1948 0.805614 TGAGACAGCAGAGTACGAGC 59.194 55.000 0.00 0.00 0.00 5.03
1719 1949 1.807142 TGTGAGACAGCAGAGTACGAG 59.193 52.381 0.00 0.00 0.00 4.18
1720 1950 1.892209 TGTGAGACAGCAGAGTACGA 58.108 50.000 0.00 0.00 0.00 3.43
1721 1951 2.929531 ATGTGAGACAGCAGAGTACG 57.070 50.000 0.00 0.00 0.00 3.67
1722 1952 4.420168 GAGAATGTGAGACAGCAGAGTAC 58.580 47.826 0.00 0.00 0.00 2.73
1723 1953 3.445450 GGAGAATGTGAGACAGCAGAGTA 59.555 47.826 0.00 0.00 0.00 2.59
1724 1954 2.233431 GGAGAATGTGAGACAGCAGAGT 59.767 50.000 0.00 0.00 0.00 3.24
1725 1955 2.496871 AGGAGAATGTGAGACAGCAGAG 59.503 50.000 0.00 0.00 0.00 3.35
1726 1956 2.495270 GAGGAGAATGTGAGACAGCAGA 59.505 50.000 0.00 0.00 0.00 4.26
1727 1957 2.496871 AGAGGAGAATGTGAGACAGCAG 59.503 50.000 0.00 0.00 0.00 4.24
1728 1958 2.533916 AGAGGAGAATGTGAGACAGCA 58.466 47.619 0.00 0.00 0.00 4.41
1729 1959 3.608316 AAGAGGAGAATGTGAGACAGC 57.392 47.619 0.00 0.00 0.00 4.40
1730 1960 9.658799 TTTAATTAAGAGGAGAATGTGAGACAG 57.341 33.333 0.00 0.00 0.00 3.51
1755 1985 4.344978 GGGAAGAAGCCCTACTGATTTTT 58.655 43.478 0.00 0.00 45.12 1.94
1756 1986 3.969553 GGGAAGAAGCCCTACTGATTTT 58.030 45.455 0.00 0.00 45.12 1.82
1757 1987 3.653835 GGGAAGAAGCCCTACTGATTT 57.346 47.619 0.00 0.00 45.12 2.17
1767 1997 0.542333 GACCAGTAGGGGAAGAAGCC 59.458 60.000 0.00 0.00 42.91 4.35
1768 1998 1.574263 AGACCAGTAGGGGAAGAAGC 58.426 55.000 0.00 0.00 42.91 3.86
1769 1999 3.983821 ACTAGACCAGTAGGGGAAGAAG 58.016 50.000 0.00 0.00 42.91 2.85
1770 2000 4.415224 AACTAGACCAGTAGGGGAAGAA 57.585 45.455 0.00 0.00 42.91 2.52
1771 2001 4.415224 AAACTAGACCAGTAGGGGAAGA 57.585 45.455 0.00 0.00 42.91 2.87
1772 2002 5.500546 AAAAACTAGACCAGTAGGGGAAG 57.499 43.478 0.00 0.00 42.91 3.46
1795 2025 3.834813 TGCACCCAATTTGTTAGGCATAA 59.165 39.130 0.00 0.00 0.00 1.90
1808 2038 2.355310 CCAAATGAGCATTGCACCCAAT 60.355 45.455 11.91 0.00 42.26 3.16
1842 2075 1.102978 GAACAAGCCACCAACAGTGT 58.897 50.000 0.00 0.00 45.74 3.55
1843 2076 1.102154 TGAACAAGCCACCAACAGTG 58.898 50.000 0.00 0.00 46.83 3.66
1844 2077 1.682854 CATGAACAAGCCACCAACAGT 59.317 47.619 0.00 0.00 0.00 3.55
1845 2078 1.682854 ACATGAACAAGCCACCAACAG 59.317 47.619 0.00 0.00 0.00 3.16
1846 2079 1.408340 CACATGAACAAGCCACCAACA 59.592 47.619 0.00 0.00 0.00 3.33
1849 2082 0.467844 AGCACATGAACAAGCCACCA 60.468 50.000 0.00 0.00 0.00 4.17
1853 2086 2.417933 CAGACTAGCACATGAACAAGCC 59.582 50.000 0.00 0.00 0.00 4.35
1854 2087 2.417933 CCAGACTAGCACATGAACAAGC 59.582 50.000 0.00 0.00 0.00 4.01
1876 2114 4.894784 ACCTACAGTACAGTTCACCAATG 58.105 43.478 0.00 0.00 0.00 2.82
1877 2115 5.163237 ACAACCTACAGTACAGTTCACCAAT 60.163 40.000 0.00 0.00 0.00 3.16
1879 2117 3.707611 ACAACCTACAGTACAGTTCACCA 59.292 43.478 0.00 0.00 0.00 4.17
1895 2133 0.182537 TACAGGCAAGTGCACAACCT 59.817 50.000 21.04 18.65 44.36 3.50
1896 2134 0.593128 CTACAGGCAAGTGCACAACC 59.407 55.000 21.04 16.60 44.36 3.77
1897 2135 0.593128 CCTACAGGCAAGTGCACAAC 59.407 55.000 21.04 7.44 44.36 3.32
1898 2136 0.182537 ACCTACAGGCAAGTGCACAA 59.817 50.000 21.04 0.00 44.36 3.33
1899 2137 0.182537 AACCTACAGGCAAGTGCACA 59.817 50.000 21.04 0.00 44.36 4.57
1900 2138 0.593128 CAACCTACAGGCAAGTGCAC 59.407 55.000 9.40 9.40 44.36 4.57
1901 2139 0.182537 ACAACCTACAGGCAAGTGCA 59.817 50.000 5.52 0.00 44.36 4.57
1902 2140 0.593128 CACAACCTACAGGCAAGTGC 59.407 55.000 0.00 0.00 39.32 4.40
1903 2141 0.593128 GCACAACCTACAGGCAAGTG 59.407 55.000 9.67 9.67 39.32 3.16
1904 2142 0.182537 TGCACAACCTACAGGCAAGT 59.817 50.000 0.00 0.00 39.32 3.16
1905 2143 0.593128 GTGCACAACCTACAGGCAAG 59.407 55.000 13.17 0.00 39.32 4.01
1906 2144 0.182537 AGTGCACAACCTACAGGCAA 59.817 50.000 21.04 0.00 39.32 4.52
1907 2145 0.182537 AAGTGCACAACCTACAGGCA 59.817 50.000 21.04 0.00 39.32 4.75
1908 2146 0.593128 CAAGTGCACAACCTACAGGC 59.407 55.000 21.04 0.00 39.32 4.85
1909 2147 1.238439 CCAAGTGCACAACCTACAGG 58.762 55.000 21.04 4.68 42.17 4.00
1935 2173 3.066760 GGTGCAGAATTACATGGCTAACC 59.933 47.826 0.00 0.00 0.00 2.85
1995 2245 6.372659 GGAACTGAAAATAAGACATGAGCAGA 59.627 38.462 0.00 0.00 0.00 4.26
2014 2264 7.425606 ACTTGCACTACTAAATTTTGGAACTG 58.574 34.615 0.00 0.00 0.00 3.16
2034 2284 6.683974 ACCATACATCAATCAGTAACTTGC 57.316 37.500 0.00 0.00 0.00 4.01
2139 2392 3.736252 AGATTTTTCGACACACTCGTGAG 59.264 43.478 3.74 0.00 46.80 3.51
2142 2395 4.916249 GTCTAGATTTTTCGACACACTCGT 59.084 41.667 0.00 0.00 43.45 4.18
2144 2397 7.284351 CAAAGTCTAGATTTTTCGACACACTC 58.716 38.462 10.29 0.00 0.00 3.51
2145 2398 6.292919 GCAAAGTCTAGATTTTTCGACACACT 60.293 38.462 10.29 0.00 0.00 3.55
2146 2399 5.846473 GCAAAGTCTAGATTTTTCGACACAC 59.154 40.000 10.29 0.00 0.00 3.82
2147 2400 5.049680 GGCAAAGTCTAGATTTTTCGACACA 60.050 40.000 10.29 0.00 0.00 3.72
2148 2401 5.049680 TGGCAAAGTCTAGATTTTTCGACAC 60.050 40.000 10.29 0.00 0.00 3.67
2170 2423 5.763698 ACATCTCTGCAATATCAAGTCATGG 59.236 40.000 0.00 0.00 0.00 3.66
2185 2438 1.337260 ACTTCCGACACACATCTCTGC 60.337 52.381 0.00 0.00 0.00 4.26
2195 2449 3.187842 GGACCAATTTGTACTTCCGACAC 59.812 47.826 0.00 0.00 0.00 3.67
2207 2461 6.974622 GTGATAGTAAGCATTGGACCAATTTG 59.025 38.462 17.42 10.09 31.05 2.32
2252 2508 7.042925 TCACTTCGTAAAGCTTTCTGTAGAAAC 60.043 37.037 16.57 4.67 36.27 2.78
2259 2515 6.658831 TGAATTCACTTCGTAAAGCTTTCTG 58.341 36.000 16.57 9.58 36.60 3.02
2284 2540 8.185506 TCCATACACAAGACTTCAAGTAGTAA 57.814 34.615 0.00 0.00 0.00 2.24
2322 2730 6.101997 TGATTAGTACACAGTGAGCAGAATG 58.898 40.000 7.81 0.00 40.87 2.67
2386 2794 8.831372 CAAAAGAAGCGCTTATAATTAATAGCG 58.169 33.333 25.11 27.07 46.69 4.26
2412 2821 9.823098 CATTATTTGCATAAGATAGAAGCTCAC 57.177 33.333 0.00 0.00 0.00 3.51
2491 2900 5.567138 AGAACAAGAAAACACTTCCACTG 57.433 39.130 0.00 0.00 0.00 3.66
2550 2959 9.086336 CAACAACAAAAAGACATCTTGTACATT 57.914 29.630 0.00 0.00 36.12 2.71
2570 2979 1.385999 GAGCTTTTCGCGACAACAAC 58.614 50.000 9.15 0.00 45.59 3.32
2727 3146 2.307098 ACTCTGCTTCCTTGCCATAAGT 59.693 45.455 0.00 0.00 0.00 2.24
2742 3161 0.524862 CATGTGGCTCCAAACTCTGC 59.475 55.000 0.00 0.00 0.00 4.26
2754 3173 0.523072 ACAACGAATCAGCATGTGGC 59.477 50.000 0.00 0.00 45.30 5.01
2802 3221 6.918892 AGCAATCAACGCAATATTAGTGTA 57.081 33.333 5.06 0.00 0.00 2.90
2854 3273 1.893801 CCACGGACTTGTCTACTTCCT 59.106 52.381 0.61 0.00 0.00 3.36
2861 3340 1.308998 CTTTTGCCACGGACTTGTCT 58.691 50.000 0.61 0.00 0.00 3.41
2871 3350 1.269448 TCGAATTCCTGCTTTTGCCAC 59.731 47.619 0.00 0.00 46.87 5.01
2888 3367 0.671472 CTCAGCATGCTTGTGGTCGA 60.671 55.000 19.98 9.52 34.76 4.20
2901 3380 8.486210 AGAAACATGAATATTACCTACTCAGCA 58.514 33.333 0.00 0.00 0.00 4.41
2908 3387 8.494433 AGGCAAGAGAAACATGAATATTACCTA 58.506 33.333 0.00 0.00 0.00 3.08
2932 3413 5.221541 CCCACTTAGACCTCAGCTTAATAGG 60.222 48.000 0.00 0.00 36.42 2.57
2939 3420 1.203187 TGACCCACTTAGACCTCAGCT 60.203 52.381 0.00 0.00 0.00 4.24
2940 3421 1.267121 TGACCCACTTAGACCTCAGC 58.733 55.000 0.00 0.00 0.00 4.26
2941 3422 3.772025 AGAATGACCCACTTAGACCTCAG 59.228 47.826 0.00 0.00 0.00 3.35
2988 3507 6.467677 AGAATGTAGAGCAGTAGAAGCAAAA 58.532 36.000 0.00 0.00 0.00 2.44
2994 3513 4.646945 CCTGGAGAATGTAGAGCAGTAGAA 59.353 45.833 0.00 0.00 0.00 2.10
3084 4277 2.557056 TCAACCTTCGAACGACTCATCT 59.443 45.455 0.00 0.00 0.00 2.90
3243 4440 5.163478 GGCCTAATCTGCAGAACAAATTGAT 60.163 40.000 22.50 0.00 0.00 2.57
3253 4450 2.158900 GCTTACTGGCCTAATCTGCAGA 60.159 50.000 20.79 20.79 0.00 4.26
3416 4613 6.455360 TTGTTTGCTTCAGTTTCAAGATCT 57.545 33.333 0.00 0.00 0.00 2.75
3550 4777 0.687757 TCTGGCTACTGGATCCGCTT 60.688 55.000 7.39 0.00 0.00 4.68
3615 4847 0.396278 CTGGCCCTTTCCCTCCATTC 60.396 60.000 0.00 0.00 0.00 2.67
3778 5045 1.063764 CTCGTGTAGACTAGTTCGCCC 59.936 57.143 0.00 0.00 0.00 6.13
3864 5131 4.424626 GTGAGAGCATTGATTACGAGTCA 58.575 43.478 0.00 0.00 0.00 3.41
3882 5149 7.988737 TCTAATTGATTTGCTATTGTGGTGAG 58.011 34.615 0.00 0.00 0.00 3.51
3883 5150 7.936496 TCTAATTGATTTGCTATTGTGGTGA 57.064 32.000 0.00 0.00 0.00 4.02
3884 5151 8.984891 TTTCTAATTGATTTGCTATTGTGGTG 57.015 30.769 0.00 0.00 0.00 4.17
3885 5152 9.643693 CTTTTCTAATTGATTTGCTATTGTGGT 57.356 29.630 0.00 0.00 0.00 4.16
3886 5153 9.859427 TCTTTTCTAATTGATTTGCTATTGTGG 57.141 29.630 0.00 0.00 0.00 4.17
3891 5158 9.538508 GGCATTCTTTTCTAATTGATTTGCTAT 57.461 29.630 0.00 0.00 0.00 2.97
3892 5159 7.701924 CGGCATTCTTTTCTAATTGATTTGCTA 59.298 33.333 0.00 0.00 0.00 3.49
3893 5160 6.532657 CGGCATTCTTTTCTAATTGATTTGCT 59.467 34.615 0.00 0.00 0.00 3.91
3894 5161 6.699063 CGGCATTCTTTTCTAATTGATTTGC 58.301 36.000 0.00 0.00 0.00 3.68
3895 5162 6.532657 AGCGGCATTCTTTTCTAATTGATTTG 59.467 34.615 1.45 0.00 0.00 2.32
3896 5163 6.532657 CAGCGGCATTCTTTTCTAATTGATTT 59.467 34.615 1.45 0.00 0.00 2.17
3900 5167 4.107622 CCAGCGGCATTCTTTTCTAATTG 58.892 43.478 1.45 0.00 0.00 2.32
3933 5207 8.372459 TCTACCACTCTACATACAAACAAACAT 58.628 33.333 0.00 0.00 0.00 2.71
3934 5208 7.654520 GTCTACCACTCTACATACAAACAAACA 59.345 37.037 0.00 0.00 0.00 2.83
3935 5209 7.148853 CGTCTACCACTCTACATACAAACAAAC 60.149 40.741 0.00 0.00 0.00 2.93
3937 5211 6.207221 TCGTCTACCACTCTACATACAAACAA 59.793 38.462 0.00 0.00 0.00 2.83
3939 5213 6.026513 GTCGTCTACCACTCTACATACAAAC 58.973 44.000 0.00 0.00 0.00 2.93
3940 5214 5.706833 TGTCGTCTACCACTCTACATACAAA 59.293 40.000 0.00 0.00 0.00 2.83
3943 5217 7.488187 TTATGTCGTCTACCACTCTACATAC 57.512 40.000 0.00 0.00 30.41 2.39
3944 5218 7.935210 TGATTATGTCGTCTACCACTCTACATA 59.065 37.037 0.00 0.00 0.00 2.29
3945 5219 6.771267 TGATTATGTCGTCTACCACTCTACAT 59.229 38.462 0.00 0.00 0.00 2.29
3976 5277 9.319143 CCTTGGAAACATACAAACAAAAATACA 57.681 29.630 0.00 0.00 42.32 2.29
3990 5291 6.953520 AGGACATGAAAATCCTTGGAAACATA 59.046 34.615 0.00 0.00 43.09 2.29
4047 5348 7.414436 TGCCGCAATTACTGTATAAAATCTTC 58.586 34.615 0.00 0.00 0.00 2.87
4050 5352 5.625311 GCTGCCGCAATTACTGTATAAAATC 59.375 40.000 0.00 0.00 35.78 2.17
4055 5357 3.186702 TGCTGCCGCAATTACTGTATA 57.813 42.857 0.00 0.00 44.62 1.47
4058 5360 4.395519 TGCTGCCGCAATTACTGT 57.604 50.000 0.00 0.00 44.62 3.55
4068 5370 2.037136 CCAAGAGGAGTTGCTGCCG 61.037 63.158 0.00 0.00 36.89 5.69
4080 5382 5.278660 CCTTTCACAGTTCCAATTCCAAGAG 60.279 44.000 0.00 0.00 0.00 2.85
4081 5383 4.584325 CCTTTCACAGTTCCAATTCCAAGA 59.416 41.667 0.00 0.00 0.00 3.02
4082 5384 4.584325 TCCTTTCACAGTTCCAATTCCAAG 59.416 41.667 0.00 0.00 0.00 3.61
4135 5440 5.184892 ACTAGGAAAACAAGCATGGATCT 57.815 39.130 0.00 0.00 0.00 2.75
4137 5442 5.567423 GCAAACTAGGAAAACAAGCATGGAT 60.567 40.000 0.00 0.00 0.00 3.41
4146 5451 3.255642 GCATGAGGCAAACTAGGAAAACA 59.744 43.478 0.00 0.00 43.97 2.83
4147 5452 3.838120 GCATGAGGCAAACTAGGAAAAC 58.162 45.455 0.00 0.00 43.97 2.43
4162 5467 3.921119 TGTAAAACCAAGCAGCATGAG 57.079 42.857 0.00 0.00 39.69 2.90
4163 5468 3.573538 ACATGTAAAACCAAGCAGCATGA 59.426 39.130 0.00 0.00 39.69 3.07
4165 5470 4.522405 TGTACATGTAAAACCAAGCAGCAT 59.478 37.500 7.25 0.00 0.00 3.79
4185 6212 6.371548 GTGAGGCTTTTGTTCTATGACATGTA 59.628 38.462 0.00 0.00 0.00 2.29
4236 6267 5.316167 TGAGACATGTATGTGCCTCTTTTT 58.684 37.500 0.00 0.00 41.95 1.94
4241 6272 3.193263 CACTGAGACATGTATGTGCCTC 58.807 50.000 0.00 0.00 41.95 4.70
4271 6302 7.228108 TGCATATGAAATTTTTGCAAGGTTTCA 59.772 29.630 24.93 24.93 40.11 2.69
4272 6303 7.583230 TGCATATGAAATTTTTGCAAGGTTTC 58.417 30.769 18.56 18.56 40.11 2.78
4273 6304 7.507733 TGCATATGAAATTTTTGCAAGGTTT 57.492 28.000 6.97 2.42 40.11 3.27
4274 6305 7.507733 TTGCATATGAAATTTTTGCAAGGTT 57.492 28.000 19.19 0.00 45.42 3.50
4311 6369 1.350351 CCCTCTCTGGCTTCCATATGG 59.650 57.143 16.25 16.25 30.82 2.74
4325 6383 0.813821 GCCATTTCTGCAACCCTCTC 59.186 55.000 0.00 0.00 0.00 3.20
4328 6386 1.610379 GGGCCATTTCTGCAACCCT 60.610 57.895 4.39 0.00 34.34 4.34
4330 6388 1.136891 GTATGGGCCATTTCTGCAACC 59.863 52.381 26.58 0.00 0.00 3.77
4331 6389 2.099756 GAGTATGGGCCATTTCTGCAAC 59.900 50.000 26.58 14.69 0.00 4.17
4334 6392 1.678101 GTGAGTATGGGCCATTTCTGC 59.322 52.381 26.58 14.84 0.00 4.26
4335 6393 3.287867 AGTGAGTATGGGCCATTTCTG 57.712 47.619 26.58 0.00 0.00 3.02
4340 6398 6.209391 GCAATATTAAAGTGAGTATGGGCCAT 59.791 38.462 24.69 24.69 0.00 4.40
4347 6405 7.806180 AGACCAGGCAATATTAAAGTGAGTAT 58.194 34.615 0.00 0.00 0.00 2.12
4350 6408 7.396540 AAAGACCAGGCAATATTAAAGTGAG 57.603 36.000 0.00 0.00 0.00 3.51
4375 6433 5.016173 CCACATAGAATCTGGGACCAAAAA 58.984 41.667 0.00 0.00 0.00 1.94
4379 6437 1.490490 GCCACATAGAATCTGGGACCA 59.510 52.381 0.00 0.00 0.00 4.02
4380 6438 1.541233 CGCCACATAGAATCTGGGACC 60.541 57.143 0.00 0.00 0.00 4.46
4399 6458 5.349817 ACAAGAAGAATCTATGAACTGCACG 59.650 40.000 0.00 0.00 33.77 5.34
4410 6469 8.506168 AACAAGACAAACACAAGAAGAATCTA 57.494 30.769 0.00 0.00 33.77 1.98
4419 6481 7.201350 GCAGTTAAGAAACAAGACAAACACAAG 60.201 37.037 0.00 0.00 38.12 3.16
4420 6482 6.584563 GCAGTTAAGAAACAAGACAAACACAA 59.415 34.615 0.00 0.00 38.12 3.33
4421 6483 6.072175 AGCAGTTAAGAAACAAGACAAACACA 60.072 34.615 0.00 0.00 38.12 3.72
4428 6490 7.856398 GGTAAGAAAGCAGTTAAGAAACAAGAC 59.144 37.037 0.00 0.00 38.12 3.01
4493 7156 2.765699 ACCTTTGTGAAACCTGCAACAT 59.234 40.909 0.00 0.00 34.36 2.71
4507 7170 4.787551 TCCATCAACTTGTGTACCTTTGT 58.212 39.130 0.00 0.00 0.00 2.83
4576 7240 3.378427 GGCATTATCACTCCACCAACTTC 59.622 47.826 0.00 0.00 0.00 3.01
4597 7262 9.123902 TCCAGATTCAACAAATAAGACATATGG 57.876 33.333 7.80 0.00 0.00 2.74
4618 7286 2.865119 TGAGCAAAGCAATCTCCAGA 57.135 45.000 0.00 0.00 0.00 3.86
4696 7385 4.526650 TGTTTCTAGATGTGCCAGACTACA 59.473 41.667 0.00 0.00 0.00 2.74
4702 7391 9.144747 GTACATATATGTTTCTAGATGTGCCAG 57.855 37.037 22.90 0.00 41.97 4.85
4764 7453 8.045720 AGGCCTCATCAGAACCTTAAAATATA 57.954 34.615 0.00 0.00 28.51 0.86
4765 7454 6.915786 AGGCCTCATCAGAACCTTAAAATAT 58.084 36.000 0.00 0.00 28.51 1.28
4766 7455 6.327386 AGGCCTCATCAGAACCTTAAAATA 57.673 37.500 0.00 0.00 28.51 1.40
4767 7456 5.198602 AGGCCTCATCAGAACCTTAAAAT 57.801 39.130 0.00 0.00 28.51 1.82
4769 7458 5.975988 ATAGGCCTCATCAGAACCTTAAA 57.024 39.130 9.68 0.00 33.62 1.52
4773 7494 4.497516 ACATATAGGCCTCATCAGAACCT 58.502 43.478 9.68 0.00 35.28 3.50
4775 7500 6.998802 AGTAACATATAGGCCTCATCAGAAC 58.001 40.000 9.68 1.54 0.00 3.01
4877 7646 8.714179 CACGTTGATTTCACTACCAAACTATTA 58.286 33.333 0.00 0.00 0.00 0.98
4887 7656 2.412847 GCCAGCACGTTGATTTCACTAC 60.413 50.000 0.00 0.00 0.00 2.73
4924 7693 2.023223 GCCGGCACAAGCATGTTTG 61.023 57.895 24.80 19.42 44.61 2.93
4950 7719 5.797051 ACAAGAAACTATAGTTACCGGCAA 58.203 37.500 18.31 0.00 37.25 4.52
4960 7729 7.979444 TTGGTCAAGGAACAAGAAACTATAG 57.021 36.000 0.00 0.00 34.05 1.31
4962 7731 7.175641 CAGATTGGTCAAGGAACAAGAAACTAT 59.824 37.037 2.93 0.00 42.74 2.12
4970 7739 2.238521 GGCAGATTGGTCAAGGAACAA 58.761 47.619 0.00 0.00 43.65 2.83
5056 7826 1.004918 GGGATTACATCTCCCGGCG 60.005 63.158 0.00 0.00 42.94 6.46
5066 7836 4.169696 CGGCTGCCGGGGATTACA 62.170 66.667 32.37 0.00 44.15 2.41
5208 7978 3.769739 TGCTCAAGAGGTAGCAAGAAA 57.230 42.857 0.00 0.00 45.36 2.52
5258 8028 1.742761 ACGCTACTTTGCTGCATCAT 58.257 45.000 1.84 0.00 0.00 2.45
5354 8124 5.652891 TGGTTGCTAGGTTCTTGTTTGTTTA 59.347 36.000 0.00 0.00 0.00 2.01
5371 8142 2.159382 CCCTTTATCACGTTGGTTGCT 58.841 47.619 0.00 0.00 0.00 3.91
5399 8170 1.668047 CGTAAGTGACCGTGAAGGGAC 60.668 57.143 0.00 0.00 46.96 4.46
5603 8375 2.858745 AGTAATGTGTTCACCCACCAC 58.141 47.619 0.37 0.00 34.35 4.16
5624 8397 4.553547 GCGCTTTTCTATCAATTGCTCGAT 60.554 41.667 0.00 0.00 0.00 3.59
5667 8440 6.764560 GTGATGCCTATATACATGATCATGCA 59.235 38.462 31.17 21.88 42.39 3.96
5751 8524 5.600069 ACTCTAGATGCATGTTGGATAGTGA 59.400 40.000 2.46 0.00 0.00 3.41
5964 8737 9.118300 CCTACTAGATTGATCTTTCTTGCAATT 57.882 33.333 0.00 0.00 38.32 2.32
6004 8777 6.467723 TCTTTGCAAGTCTCTTCGAATTAC 57.532 37.500 0.00 0.00 0.00 1.89
6094 8867 4.163268 TCAAGATCCGATGAATTGTGGGTA 59.837 41.667 0.00 0.00 0.00 3.69
6146 8919 7.174772 TCTCCTCGATTCTCTTGAAGATCTATG 59.825 40.741 0.00 0.00 35.44 2.23
6155 8928 5.011125 ACAAAGTTCTCCTCGATTCTCTTGA 59.989 40.000 0.00 0.00 0.00 3.02
6187 8960 2.304180 TGGCTTCTTCTCTCTCTTTGGG 59.696 50.000 0.00 0.00 0.00 4.12
6321 9096 2.422803 CCATCTTGGGGCTTTTCCGATA 60.423 50.000 0.00 0.00 32.67 2.92
6323 9098 0.323360 CCATCTTGGGGCTTTTCCGA 60.323 55.000 0.00 0.00 32.67 4.55
6353 9129 2.960819 ACGCAGTGCTAAAAGAGGTAG 58.039 47.619 14.33 0.00 42.51 3.18
6357 9133 1.873591 ACCAACGCAGTGCTAAAAGAG 59.126 47.619 14.33 0.00 45.00 2.85
6358 9134 1.961793 ACCAACGCAGTGCTAAAAGA 58.038 45.000 14.33 0.00 45.00 2.52
6359 9135 2.774439 AACCAACGCAGTGCTAAAAG 57.226 45.000 14.33 0.00 45.00 2.27
6360 9136 3.440228 GAAAACCAACGCAGTGCTAAAA 58.560 40.909 14.33 0.00 45.00 1.52
6361 9137 2.223618 GGAAAACCAACGCAGTGCTAAA 60.224 45.455 14.33 0.00 45.00 1.85
6362 9138 1.335496 GGAAAACCAACGCAGTGCTAA 59.665 47.619 14.33 0.00 45.00 3.09
6363 9139 0.948678 GGAAAACCAACGCAGTGCTA 59.051 50.000 14.33 0.00 45.00 3.49
6364 9140 1.733526 GGAAAACCAACGCAGTGCT 59.266 52.632 14.33 0.00 45.00 4.40
6365 9141 1.299850 GGGAAAACCAACGCAGTGC 60.300 57.895 4.58 4.58 45.00 4.40
6366 9142 1.362355 GGGGAAAACCAACGCAGTG 59.638 57.895 0.00 0.00 40.26 3.66
6367 9143 2.190841 CGGGGAAAACCAACGCAGT 61.191 57.895 0.00 0.00 42.91 4.40
6368 9144 1.448922 TTCGGGGAAAACCAACGCAG 61.449 55.000 0.00 0.00 42.91 5.18
6369 9145 1.448922 CTTCGGGGAAAACCAACGCA 61.449 55.000 0.00 0.00 42.91 5.24
6370 9146 1.167781 TCTTCGGGGAAAACCAACGC 61.168 55.000 0.00 0.00 42.91 4.84
6371 9147 0.872388 CTCTTCGGGGAAAACCAACG 59.128 55.000 0.00 0.00 42.91 4.10
6372 9148 1.202842 TCCTCTTCGGGGAAAACCAAC 60.203 52.381 0.00 0.00 42.91 3.77
6373 9149 1.142060 TCCTCTTCGGGGAAAACCAA 58.858 50.000 0.00 0.00 42.91 3.67
6374 9150 1.073284 CTTCCTCTTCGGGGAAAACCA 59.927 52.381 0.00 0.00 41.58 3.67
6375 9151 1.613520 CCTTCCTCTTCGGGGAAAACC 60.614 57.143 0.00 0.00 41.58 3.27
6376 9152 1.613520 CCCTTCCTCTTCGGGGAAAAC 60.614 57.143 0.00 0.00 41.58 2.43
6377 9153 0.696501 CCCTTCCTCTTCGGGGAAAA 59.303 55.000 0.00 0.00 41.58 2.29
6378 9154 0.178885 TCCCTTCCTCTTCGGGGAAA 60.179 55.000 0.00 0.00 44.10 3.13
6379 9155 1.472460 TCCCTTCCTCTTCGGGGAA 59.528 57.895 0.00 0.00 44.10 3.97
6380 9156 3.197485 TCCCTTCCTCTTCGGGGA 58.803 61.111 0.00 0.00 44.76 4.81
6381 9157 0.691078 TCATCCCTTCCTCTTCGGGG 60.691 60.000 0.00 0.00 38.55 5.73
6382 9158 1.071385 CATCATCCCTTCCTCTTCGGG 59.929 57.143 0.00 0.00 39.41 5.14
6383 9159 1.542108 GCATCATCCCTTCCTCTTCGG 60.542 57.143 0.00 0.00 0.00 4.30
6384 9160 1.139654 TGCATCATCCCTTCCTCTTCG 59.860 52.381 0.00 0.00 0.00 3.79
6385 9161 2.437281 TCTGCATCATCCCTTCCTCTTC 59.563 50.000 0.00 0.00 0.00 2.87
6386 9162 2.485659 TCTGCATCATCCCTTCCTCTT 58.514 47.619 0.00 0.00 0.00 2.85
6387 9163 2.187239 TCTGCATCATCCCTTCCTCT 57.813 50.000 0.00 0.00 0.00 3.69
6388 9164 3.287867 TTTCTGCATCATCCCTTCCTC 57.712 47.619 0.00 0.00 0.00 3.71
6389 9165 3.011032 ACTTTTCTGCATCATCCCTTCCT 59.989 43.478 0.00 0.00 0.00 3.36
6390 9166 3.359950 ACTTTTCTGCATCATCCCTTCC 58.640 45.455 0.00 0.00 0.00 3.46
6391 9167 4.036144 GCTACTTTTCTGCATCATCCCTTC 59.964 45.833 0.00 0.00 0.00 3.46
6392 9168 3.950395 GCTACTTTTCTGCATCATCCCTT 59.050 43.478 0.00 0.00 0.00 3.95
6393 9169 3.054139 TGCTACTTTTCTGCATCATCCCT 60.054 43.478 0.00 0.00 0.00 4.20
6394 9170 3.282021 TGCTACTTTTCTGCATCATCCC 58.718 45.455 0.00 0.00 0.00 3.85
6395 9171 6.261826 ACTTATGCTACTTTTCTGCATCATCC 59.738 38.462 2.87 0.00 44.91 3.51
6396 9172 7.256756 ACTTATGCTACTTTTCTGCATCATC 57.743 36.000 2.87 0.00 44.91 2.92
6397 9173 8.915057 ATACTTATGCTACTTTTCTGCATCAT 57.085 30.769 2.87 0.00 44.91 2.45
6398 9174 8.737168 AATACTTATGCTACTTTTCTGCATCA 57.263 30.769 2.87 0.00 44.91 3.07
6399 9175 9.657121 GAAATACTTATGCTACTTTTCTGCATC 57.343 33.333 2.87 0.00 44.91 3.91
6401 9177 7.067008 GGGAAATACTTATGCTACTTTTCTGCA 59.933 37.037 0.00 0.00 41.13 4.41
6402 9178 7.283354 AGGGAAATACTTATGCTACTTTTCTGC 59.717 37.037 0.00 0.00 0.00 4.26
6403 9179 8.738645 AGGGAAATACTTATGCTACTTTTCTG 57.261 34.615 0.00 0.00 0.00 3.02
6404 9180 8.548877 TGAGGGAAATACTTATGCTACTTTTCT 58.451 33.333 0.00 0.00 0.00 2.52
6405 9181 8.732746 TGAGGGAAATACTTATGCTACTTTTC 57.267 34.615 0.00 0.00 0.00 2.29
6406 9182 8.329502 ACTGAGGGAAATACTTATGCTACTTTT 58.670 33.333 0.00 0.00 0.00 2.27
6407 9183 7.862675 ACTGAGGGAAATACTTATGCTACTTT 58.137 34.615 0.00 0.00 0.00 2.66
6408 9184 7.439108 ACTGAGGGAAATACTTATGCTACTT 57.561 36.000 0.00 0.00 0.00 2.24
6409 9185 7.439108 AACTGAGGGAAATACTTATGCTACT 57.561 36.000 0.00 0.00 0.00 2.57
6410 9186 8.507524 AAAACTGAGGGAAATACTTATGCTAC 57.492 34.615 0.00 0.00 0.00 3.58
6411 9187 8.956426 CAAAAACTGAGGGAAATACTTATGCTA 58.044 33.333 0.00 0.00 0.00 3.49
6412 9188 7.669722 TCAAAAACTGAGGGAAATACTTATGCT 59.330 33.333 0.00 0.00 0.00 3.79
6413 9189 7.826690 TCAAAAACTGAGGGAAATACTTATGC 58.173 34.615 0.00 0.00 0.00 3.14
6428 9204 6.361433 TGATACCTTGGTTCTCAAAAACTGA 58.639 36.000 0.00 0.00 34.56 3.41
6429 9205 6.633500 TGATACCTTGGTTCTCAAAAACTG 57.367 37.500 0.00 0.00 34.56 3.16
6430 9206 7.039714 GGATTGATACCTTGGTTCTCAAAAACT 60.040 37.037 16.13 5.53 34.56 2.66
6431 9207 7.090808 GGATTGATACCTTGGTTCTCAAAAAC 58.909 38.462 16.13 12.11 34.56 2.43
6432 9208 6.780031 TGGATTGATACCTTGGTTCTCAAAAA 59.220 34.615 16.13 7.12 34.56 1.94
6433 9209 6.310941 TGGATTGATACCTTGGTTCTCAAAA 58.689 36.000 16.13 7.35 34.56 2.44
6434 9210 5.886609 TGGATTGATACCTTGGTTCTCAAA 58.113 37.500 16.13 3.96 34.56 2.69
6435 9211 5.014123 ACTGGATTGATACCTTGGTTCTCAA 59.986 40.000 15.14 15.14 0.00 3.02
6436 9212 4.536090 ACTGGATTGATACCTTGGTTCTCA 59.464 41.667 0.00 0.00 0.00 3.27
6437 9213 5.104259 ACTGGATTGATACCTTGGTTCTC 57.896 43.478 0.00 0.00 0.00 2.87
6438 9214 5.131142 CCTACTGGATTGATACCTTGGTTCT 59.869 44.000 0.00 0.00 34.57 3.01
6439 9215 5.130477 TCCTACTGGATTGATACCTTGGTTC 59.870 44.000 0.00 0.00 37.46 3.62
6440 9216 5.036916 TCCTACTGGATTGATACCTTGGTT 58.963 41.667 0.00 0.00 37.46 3.67
6441 9217 4.631234 TCCTACTGGATTGATACCTTGGT 58.369 43.478 0.00 0.00 37.46 3.67
6442 9218 4.040952 CCTCCTACTGGATTGATACCTTGG 59.959 50.000 0.00 0.00 42.29 3.61
6443 9219 4.503991 GCCTCCTACTGGATTGATACCTTG 60.504 50.000 0.00 0.00 42.29 3.61
6444 9220 3.648545 GCCTCCTACTGGATTGATACCTT 59.351 47.826 0.00 0.00 42.29 3.50
6445 9221 3.116551 AGCCTCCTACTGGATTGATACCT 60.117 47.826 0.00 0.00 42.29 3.08
6446 9222 3.243724 AGCCTCCTACTGGATTGATACC 58.756 50.000 0.00 0.00 42.29 2.73
6447 9223 4.082679 CGTAGCCTCCTACTGGATTGATAC 60.083 50.000 0.00 0.00 42.29 2.24
6448 9224 4.079970 CGTAGCCTCCTACTGGATTGATA 58.920 47.826 0.00 0.00 42.29 2.15
6449 9225 2.894126 CGTAGCCTCCTACTGGATTGAT 59.106 50.000 0.00 0.00 42.29 2.57
6450 9226 2.307768 CGTAGCCTCCTACTGGATTGA 58.692 52.381 0.00 0.00 42.29 2.57
6451 9227 2.802787 CGTAGCCTCCTACTGGATTG 57.197 55.000 0.00 0.00 42.29 2.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.