Multiple sequence alignment - TraesCS5A01G067100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G067100 chr5A 100.000 5286 0 0 1665 6950 74682781 74677496 0.000000e+00 9762.0
1 TraesCS5A01G067100 chr5A 100.000 1404 0 0 1 1404 74684445 74683042 0.000000e+00 2593.0
2 TraesCS5A01G067100 chr5A 95.556 45 0 2 6166 6210 77328842 77328884 3.480000e-08 71.3
3 TraesCS5A01G067100 chr5A 95.455 44 2 0 6171 6214 522068465 522068508 3.480000e-08 71.3
4 TraesCS5A01G067100 chr5B 94.234 1977 89 10 4112 6085 87980530 87978576 0.000000e+00 2996.0
5 TraesCS5A01G067100 chr5B 84.754 1220 82 50 123 1308 87984064 87982915 0.000000e+00 1127.0
6 TraesCS5A01G067100 chr5B 90.800 500 38 5 1705 2201 87982921 87982427 0.000000e+00 662.0
7 TraesCS5A01G067100 chr5B 93.211 383 15 8 2493 2872 87980901 87980527 2.830000e-153 553.0
8 TraesCS5A01G067100 chr5B 79.603 706 79 36 6261 6950 87772041 87771385 4.950000e-121 446.0
9 TraesCS5A01G067100 chr5B 97.600 125 3 0 1 125 38574555 38574431 1.520000e-51 215.0
10 TraesCS5A01G067100 chr5B 88.889 126 9 5 2181 2306 87982410 87982290 4.340000e-32 150.0
11 TraesCS5A01G067100 chr5B 92.308 91 3 2 2398 2485 87981166 87981077 7.320000e-25 126.0
12 TraesCS5A01G067100 chr5B 90.000 50 1 2 6077 6125 87978393 87978347 2.090000e-05 62.1
13 TraesCS5A01G067100 chr2A 97.735 1236 26 2 2871 4104 455514874 455516109 0.000000e+00 2126.0
14 TraesCS5A01G067100 chr2A 95.604 91 2 2 1315 1404 71061412 71061501 2.020000e-30 145.0
15 TraesCS5A01G067100 chr7D 94.826 1237 63 1 2869 4104 18921729 18922965 0.000000e+00 1929.0
16 TraesCS5A01G067100 chr1D 94.656 1235 65 1 2871 4104 480525097 480523863 0.000000e+00 1914.0
17 TraesCS5A01G067100 chr1D 94.089 1235 72 1 2871 4104 84050986 84052220 0.000000e+00 1875.0
18 TraesCS5A01G067100 chr1D 72.982 607 144 16 5164 5760 362489750 362489154 1.980000e-45 195.0
19 TraesCS5A01G067100 chr5D 94.426 1202 51 5 4887 6086 78121372 78120185 0.000000e+00 1834.0
20 TraesCS5A01G067100 chr5D 94.679 733 34 1 4112 4844 78122349 78121622 0.000000e+00 1133.0
21 TraesCS5A01G067100 chr5D 91.737 835 34 17 123 948 78125087 78124279 0.000000e+00 1127.0
22 TraesCS5A01G067100 chr5D 89.031 784 60 11 1705 2471 78123766 78122992 0.000000e+00 948.0
23 TraesCS5A01G067100 chr5D 89.819 442 35 8 6250 6687 78057817 78057382 6.090000e-155 558.0
24 TraesCS5A01G067100 chr5D 88.272 486 24 15 2398 2872 78122809 78122346 1.020000e-152 551.0
25 TraesCS5A01G067100 chr5D 96.321 299 8 3 6653 6950 78057454 78057158 8.100000e-134 488.0
26 TraesCS5A01G067100 chr5D 89.362 329 27 5 980 1308 78124080 78123760 2.330000e-109 407.0
27 TraesCS5A01G067100 chr3B 93.355 1234 79 2 2874 4104 313810607 313811840 0.000000e+00 1821.0
28 TraesCS5A01G067100 chr3A 92.476 1236 89 2 2873 4104 728367277 728366042 0.000000e+00 1764.0
29 TraesCS5A01G067100 chr3A 92.437 476 36 0 2876 3351 336620513 336620038 0.000000e+00 680.0
30 TraesCS5A01G067100 chr3A 94.444 90 4 1 1316 1404 724112182 724112271 3.380000e-28 137.0
31 TraesCS5A01G067100 chr3A 90.323 93 4 3 1316 1404 639240280 639240189 4.400000e-22 117.0
32 TraesCS5A01G067100 chr6D 91.350 474 40 1 2870 3342 468830705 468830232 0.000000e+00 647.0
33 TraesCS5A01G067100 chr4A 74.133 750 161 30 4947 5680 2952559 2951827 5.310000e-71 279.0
34 TraesCS5A01G067100 chr4A 96.850 127 4 0 1 127 310807173 310807299 5.460000e-51 213.0
35 TraesCS5A01G067100 chr4A 96.850 127 4 0 1 127 574727017 574727143 5.460000e-51 213.0
36 TraesCS5A01G067100 chr4A 96.850 127 3 1 1 127 332652296 332652421 1.960000e-50 211.0
37 TraesCS5A01G067100 chr1A 74.740 673 145 20 5164 5824 462001900 462001241 1.910000e-70 278.0
38 TraesCS5A01G067100 chr1A 97.561 123 3 0 1 123 101089636 101089514 1.960000e-50 211.0
39 TraesCS5A01G067100 chr1A 96.825 126 4 0 1 126 361079605 361079480 1.960000e-50 211.0
40 TraesCS5A01G067100 chr4D 73.832 749 163 28 4948 5680 468593000 468593731 4.130000e-67 267.0
41 TraesCS5A01G067100 chr4B 73.041 753 164 35 4947 5680 587903205 587903937 5.420000e-56 230.0
42 TraesCS5A01G067100 chr4B 97.561 123 3 0 1 123 344781856 344781978 1.960000e-50 211.0
43 TraesCS5A01G067100 chr4B 93.478 46 2 1 6166 6211 2230812 2230856 4.500000e-07 67.6
44 TraesCS5A01G067100 chr4B 93.478 46 2 1 6166 6211 483533867 483533911 4.500000e-07 67.6
45 TraesCS5A01G067100 chr1B 96.850 127 3 1 1 127 84377251 84377126 1.960000e-50 211.0
46 TraesCS5A01G067100 chr7B 94.074 135 8 0 1 135 605868748 605868614 9.140000e-49 206.0
47 TraesCS5A01G067100 chr7B 95.556 90 3 1 1316 1404 301604796 301604885 7.270000e-30 143.0
48 TraesCS5A01G067100 chr7B 89.247 93 6 4 1316 1404 336366789 336366697 5.700000e-21 113.0
49 TraesCS5A01G067100 chr7A 97.778 90 1 1 1315 1404 26678022 26678110 3.360000e-33 154.0
50 TraesCS5A01G067100 chr7A 95.604 91 2 1 1316 1404 85616102 85616192 2.020000e-30 145.0
51 TraesCS5A01G067100 chr2B 95.294 85 4 0 1312 1396 728228719 728228803 1.220000e-27 135.0
52 TraesCS5A01G067100 chr2D 93.617 47 3 0 6166 6212 10174698 10174652 3.480000e-08 71.3
53 TraesCS5A01G067100 chr6A 90.566 53 3 2 6171 6222 88131103 88131154 1.250000e-07 69.4
54 TraesCS5A01G067100 chr6B 87.719 57 6 1 6166 6222 702214953 702214898 1.620000e-06 65.8
55 TraesCS5A01G067100 chr3D 87.500 56 7 0 6166 6221 593082327 593082272 1.620000e-06 65.8
56 TraesCS5A01G067100 chr3D 88.679 53 4 2 6166 6217 540214377 540214326 5.820000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G067100 chr5A 74677496 74684445 6949 True 6177.500000 9762 100.000000 1 6950 2 chr5A.!!$R1 6949
1 TraesCS5A01G067100 chr5B 87978347 87984064 5717 True 810.871429 2996 90.599429 123 6125 7 chr5B.!!$R3 6002
2 TraesCS5A01G067100 chr5B 87771385 87772041 656 True 446.000000 446 79.603000 6261 6950 1 chr5B.!!$R2 689
3 TraesCS5A01G067100 chr2A 455514874 455516109 1235 False 2126.000000 2126 97.735000 2871 4104 1 chr2A.!!$F2 1233
4 TraesCS5A01G067100 chr7D 18921729 18922965 1236 False 1929.000000 1929 94.826000 2869 4104 1 chr7D.!!$F1 1235
5 TraesCS5A01G067100 chr1D 480523863 480525097 1234 True 1914.000000 1914 94.656000 2871 4104 1 chr1D.!!$R2 1233
6 TraesCS5A01G067100 chr1D 84050986 84052220 1234 False 1875.000000 1875 94.089000 2871 4104 1 chr1D.!!$F1 1233
7 TraesCS5A01G067100 chr5D 78120185 78125087 4902 True 1000.000000 1834 91.251167 123 6086 6 chr5D.!!$R2 5963
8 TraesCS5A01G067100 chr5D 78057158 78057817 659 True 523.000000 558 93.070000 6250 6950 2 chr5D.!!$R1 700
9 TraesCS5A01G067100 chr3B 313810607 313811840 1233 False 1821.000000 1821 93.355000 2874 4104 1 chr3B.!!$F1 1230
10 TraesCS5A01G067100 chr3A 728366042 728367277 1235 True 1764.000000 1764 92.476000 2873 4104 1 chr3A.!!$R3 1231
11 TraesCS5A01G067100 chr4A 2951827 2952559 732 True 279.000000 279 74.133000 4947 5680 1 chr4A.!!$R1 733
12 TraesCS5A01G067100 chr1A 462001241 462001900 659 True 278.000000 278 74.740000 5164 5824 1 chr1A.!!$R3 660
13 TraesCS5A01G067100 chr4D 468593000 468593731 731 False 267.000000 267 73.832000 4948 5680 1 chr4D.!!$F1 732
14 TraesCS5A01G067100 chr4B 587903205 587903937 732 False 230.000000 230 73.041000 4947 5680 1 chr4B.!!$F4 733

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
42 43 0.251341 ATGGAACCAGCACAACCCTC 60.251 55.0 0.00 0.0 0.00 4.30 F
1321 1505 0.108567 AAACACAAACACCCAACGGC 60.109 50.0 0.00 0.0 0.00 5.68 F
1689 1873 0.181350 ATCCCCCAGCGAATTCTGTC 59.819 55.0 3.52 0.0 32.32 3.51 F
2486 3753 0.176449 GGTCGCGGGTACTGGTAATT 59.824 55.0 6.13 0.0 33.56 1.40 F
4027 5465 0.179073 CTTCCTCGTCGGCATTCCAT 60.179 55.0 0.00 0.0 0.00 3.41 F
4319 5763 0.395862 TCGAGAGGGAGATGGTGGAC 60.396 60.0 0.00 0.0 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1700 1884 0.178981 ATCAGCAGGGTGTTTGCAGT 60.179 50.0 0.00 0.00 43.92 4.40 R
2226 2449 0.391528 CATCGTCACTCATGTGCCCA 60.392 55.0 0.00 0.00 43.49 5.36 R
3653 5091 0.601558 GCTATTCGCGAGGGTGGATA 59.398 55.0 9.59 2.07 0.00 2.59 R
4324 5768 0.460284 CGAAGTTCAGGATCCCCACG 60.460 60.0 8.55 1.57 33.88 4.94 R
4879 6323 0.317799 TCATGGCATGCAACACCAAC 59.682 50.0 22.56 0.00 36.94 3.77 R
6217 8060 1.231963 ATCCCTTGGATGTAACCCCC 58.768 55.0 0.00 0.00 41.43 5.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 7.681939 TGTAAGACAATAAGTTCATGGAACC 57.318 36.000 5.54 0.00 42.85 3.62
31 32 7.227873 TGTAAGACAATAAGTTCATGGAACCA 58.772 34.615 5.54 0.00 42.85 3.67
32 33 6.824305 AAGACAATAAGTTCATGGAACCAG 57.176 37.500 5.54 0.00 42.85 4.00
33 34 4.702131 AGACAATAAGTTCATGGAACCAGC 59.298 41.667 5.54 0.00 42.85 4.85
34 35 4.406456 ACAATAAGTTCATGGAACCAGCA 58.594 39.130 5.54 0.00 42.85 4.41
35 36 4.218417 ACAATAAGTTCATGGAACCAGCAC 59.782 41.667 5.54 0.00 42.85 4.40
36 37 2.363306 AAGTTCATGGAACCAGCACA 57.637 45.000 5.54 0.00 42.85 4.57
37 38 2.363306 AGTTCATGGAACCAGCACAA 57.637 45.000 5.54 0.00 42.85 3.33
38 39 1.956477 AGTTCATGGAACCAGCACAAC 59.044 47.619 5.54 0.45 42.85 3.32
39 40 1.000274 GTTCATGGAACCAGCACAACC 60.000 52.381 0.00 0.00 36.65 3.77
40 41 0.539438 TCATGGAACCAGCACAACCC 60.539 55.000 0.00 0.00 0.00 4.11
41 42 0.540365 CATGGAACCAGCACAACCCT 60.540 55.000 0.00 0.00 0.00 4.34
42 43 0.251341 ATGGAACCAGCACAACCCTC 60.251 55.000 0.00 0.00 0.00 4.30
43 44 1.352622 TGGAACCAGCACAACCCTCT 61.353 55.000 0.00 0.00 0.00 3.69
44 45 0.690762 GGAACCAGCACAACCCTCTA 59.309 55.000 0.00 0.00 0.00 2.43
45 46 1.339151 GGAACCAGCACAACCCTCTAG 60.339 57.143 0.00 0.00 0.00 2.43
46 47 0.693049 AACCAGCACAACCCTCTAGG 59.307 55.000 0.00 0.00 43.78 3.02
58 59 2.407340 CCTCTAGGGGTGGCTTATCT 57.593 55.000 0.00 0.00 0.00 1.98
59 60 2.252714 CCTCTAGGGGTGGCTTATCTC 58.747 57.143 0.00 0.00 0.00 2.75
60 61 2.426414 CCTCTAGGGGTGGCTTATCTCA 60.426 54.545 0.00 0.00 0.00 3.27
61 62 3.515562 CTCTAGGGGTGGCTTATCTCAT 58.484 50.000 0.00 0.00 0.00 2.90
62 63 3.906846 CTCTAGGGGTGGCTTATCTCATT 59.093 47.826 0.00 0.00 0.00 2.57
63 64 5.087323 CTCTAGGGGTGGCTTATCTCATTA 58.913 45.833 0.00 0.00 0.00 1.90
64 65 5.665701 TCTAGGGGTGGCTTATCTCATTAT 58.334 41.667 0.00 0.00 0.00 1.28
65 66 6.811574 TCTAGGGGTGGCTTATCTCATTATA 58.188 40.000 0.00 0.00 0.00 0.98
66 67 7.430844 TCTAGGGGTGGCTTATCTCATTATAT 58.569 38.462 0.00 0.00 0.00 0.86
67 68 8.574853 TCTAGGGGTGGCTTATCTCATTATATA 58.425 37.037 0.00 0.00 0.00 0.86
68 69 9.386122 CTAGGGGTGGCTTATCTCATTATATAT 57.614 37.037 0.00 0.00 0.00 0.86
70 71 9.744125 AGGGGTGGCTTATCTCATTATATATAA 57.256 33.333 7.62 7.62 0.00 0.98
92 93 8.774890 ATAATGGTTGTGTTACAATACGTACA 57.225 30.769 0.00 0.00 40.59 2.90
93 94 7.675962 AATGGTTGTGTTACAATACGTACAT 57.324 32.000 0.00 0.00 40.59 2.29
94 95 8.774890 AATGGTTGTGTTACAATACGTACATA 57.225 30.769 0.00 0.00 40.59 2.29
95 96 7.815398 TGGTTGTGTTACAATACGTACATAG 57.185 36.000 0.00 0.00 40.59 2.23
96 97 6.812656 TGGTTGTGTTACAATACGTACATAGG 59.187 38.462 0.00 0.00 40.59 2.57
97 98 6.813152 GGTTGTGTTACAATACGTACATAGGT 59.187 38.462 0.00 0.00 40.59 3.08
98 99 7.973388 GGTTGTGTTACAATACGTACATAGGTA 59.027 37.037 0.00 0.00 40.59 3.08
99 100 8.798153 GTTGTGTTACAATACGTACATAGGTAC 58.202 37.037 7.62 7.62 42.01 3.34
100 101 8.518702 TTGTGTTACAATACGTACATAGGTACA 58.481 33.333 17.10 0.00 40.43 2.90
134 135 7.777095 ACATAGTCTAACACTCCAATTCTCTC 58.223 38.462 0.00 0.00 36.43 3.20
186 188 1.890876 TGCACGCATGTAACCTTCTT 58.109 45.000 0.00 0.00 0.00 2.52
187 189 2.226330 TGCACGCATGTAACCTTCTTT 58.774 42.857 0.00 0.00 0.00 2.52
193 195 3.058293 CGCATGTAACCTTCTTTGCAAGA 60.058 43.478 0.00 0.00 35.26 3.02
194 196 4.479619 GCATGTAACCTTCTTTGCAAGAG 58.520 43.478 0.00 0.73 39.03 2.85
196 198 2.884639 TGTAACCTTCTTTGCAAGAGCC 59.115 45.455 0.00 0.00 39.03 4.70
197 199 1.332195 AACCTTCTTTGCAAGAGCCC 58.668 50.000 0.00 0.00 39.03 5.19
202 204 2.664402 TCTTTGCAAGAGCCCTTTCT 57.336 45.000 0.00 0.00 41.13 2.52
230 232 7.230712 AGTTTAGCAGTTTACCTAAAGCAACAT 59.769 33.333 0.00 0.00 35.04 2.71
232 234 5.772521 AGCAGTTTACCTAAAGCAACATTG 58.227 37.500 0.00 0.00 0.00 2.82
245 247 3.896888 AGCAACATTGGAGAACCATTCAA 59.103 39.130 0.00 0.00 46.34 2.69
246 248 4.344679 AGCAACATTGGAGAACCATTCAAA 59.655 37.500 0.00 0.00 46.34 2.69
249 254 5.314923 ACATTGGAGAACCATTCAAATCG 57.685 39.130 0.00 0.00 46.34 3.34
328 334 0.459489 ACCAACACACAACACATGCC 59.541 50.000 0.00 0.00 0.00 4.40
331 337 2.128821 CAACACACAACACATGCCATG 58.871 47.619 2.40 2.40 0.00 3.66
375 382 3.293337 GTTGGGTTTGGTGAACTTACCT 58.707 45.455 0.00 0.00 41.43 3.08
385 392 4.707448 TGGTGAACTTACCTCAAAGCAAAA 59.293 37.500 0.00 0.00 41.43 2.44
415 422 5.628193 CGACGTTTCTTTGTGTACATCTACT 59.372 40.000 0.00 0.00 0.00 2.57
416 423 6.398621 CGACGTTTCTTTGTGTACATCTACTG 60.399 42.308 0.00 0.00 0.00 2.74
421 428 5.637809 TCTTTGTGTACATCTACTGCTACG 58.362 41.667 0.00 0.00 0.00 3.51
422 429 5.182570 TCTTTGTGTACATCTACTGCTACGT 59.817 40.000 0.00 0.00 0.00 3.57
423 430 6.372381 TCTTTGTGTACATCTACTGCTACGTA 59.628 38.462 0.00 0.00 0.00 3.57
424 431 5.475273 TGTGTACATCTACTGCTACGTAC 57.525 43.478 0.00 0.00 0.00 3.67
425 432 5.181009 TGTGTACATCTACTGCTACGTACT 58.819 41.667 0.00 0.00 32.41 2.73
426 433 5.064325 TGTGTACATCTACTGCTACGTACTG 59.936 44.000 0.00 0.00 32.41 2.74
430 437 4.272991 ACATCTACTGCTACGTACTGCTAC 59.727 45.833 8.13 0.00 0.00 3.58
431 438 4.134379 TCTACTGCTACGTACTGCTACT 57.866 45.455 8.13 0.00 0.00 2.57
432 439 3.869832 TCTACTGCTACGTACTGCTACTG 59.130 47.826 8.13 0.30 0.00 2.74
433 440 2.434428 ACTGCTACGTACTGCTACTGT 58.566 47.619 8.13 0.00 0.00 3.55
434 441 2.818432 ACTGCTACGTACTGCTACTGTT 59.182 45.455 8.13 0.00 0.00 3.16
435 442 4.005650 ACTGCTACGTACTGCTACTGTTA 58.994 43.478 8.13 0.00 0.00 2.41
436 443 4.094590 ACTGCTACGTACTGCTACTGTTAG 59.905 45.833 8.13 0.00 0.00 2.34
468 475 5.749596 TTTGGTTCACTTGTGTACATCTG 57.250 39.130 0.00 0.00 0.00 2.90
479 486 1.118838 GTACATCTGAGCCAGAGCCT 58.881 55.000 10.13 0.00 44.08 4.58
481 488 0.540923 ACATCTGAGCCAGAGCCTTC 59.459 55.000 10.13 0.00 44.08 3.46
484 491 1.356124 TCTGAGCCAGAGCCTTCTTT 58.644 50.000 1.25 0.00 41.25 2.52
485 492 1.002888 TCTGAGCCAGAGCCTTCTTTG 59.997 52.381 1.25 0.00 41.25 2.77
486 493 1.002888 CTGAGCCAGAGCCTTCTTTGA 59.997 52.381 0.00 0.00 41.25 2.69
487 494 1.002888 TGAGCCAGAGCCTTCTTTGAG 59.997 52.381 0.00 0.00 41.25 3.02
488 495 1.277557 GAGCCAGAGCCTTCTTTGAGA 59.722 52.381 0.00 0.00 41.25 3.27
489 496 1.914798 AGCCAGAGCCTTCTTTGAGAT 59.085 47.619 0.00 0.00 41.25 2.75
490 497 2.015587 GCCAGAGCCTTCTTTGAGATG 58.984 52.381 0.00 0.00 0.00 2.90
494 501 4.077822 CAGAGCCTTCTTTGAGATGGTTT 58.922 43.478 10.45 1.90 40.56 3.27
577 584 4.137543 AGAAATGACAGGGTGAGTGAAAC 58.862 43.478 0.00 0.00 0.00 2.78
635 642 8.873830 CAATAGACCAACAGAAGTAGTAACATG 58.126 37.037 0.00 0.00 0.00 3.21
655 662 3.101437 TGCGTCCTAGGTTTGGAAGATA 58.899 45.455 9.08 0.00 35.57 1.98
656 663 3.118884 TGCGTCCTAGGTTTGGAAGATAC 60.119 47.826 9.08 0.00 35.57 2.24
798 811 0.877071 AGGAACTTGTCAAGCATGCG 59.123 50.000 13.01 0.00 27.25 4.73
836 849 1.005867 CTGCCAATTGCCAACGCTT 60.006 52.632 0.00 0.00 40.16 4.68
837 850 1.286354 CTGCCAATTGCCAACGCTTG 61.286 55.000 0.00 0.00 40.16 4.01
847 860 6.693315 ATTGCCAACGCTTGTATATAAGTT 57.307 33.333 10.51 0.00 35.36 2.66
848 861 6.503589 TTGCCAACGCTTGTATATAAGTTT 57.496 33.333 10.51 2.65 35.36 2.66
889 902 3.074412 TGGAACTTTCATTTCGCCTCTC 58.926 45.455 0.00 0.00 0.00 3.20
912 925 2.121963 TCCCCCTTGGTCACAGCT 60.122 61.111 0.00 0.00 34.77 4.24
948 963 4.746535 TGTACATATATATGCCCACGGG 57.253 45.455 20.46 0.00 37.19 5.28
1004 1186 4.198028 AGATTTTTGGCTTCAAGATGGC 57.802 40.909 0.00 3.05 0.00 4.40
1089 1272 2.581354 CTCTCAACCCTGCCTCCG 59.419 66.667 0.00 0.00 0.00 4.63
1100 1283 1.294659 CTGCCTCCGTCTGCAAACTC 61.295 60.000 0.00 0.00 36.98 3.01
1119 1302 1.753649 TCCACTGCTATCTCTCTGCAC 59.246 52.381 0.00 0.00 32.91 4.57
1123 1306 2.430332 ACTGCTATCTCTCTGCACCTTC 59.570 50.000 0.00 0.00 32.91 3.46
1125 1308 2.167281 TGCTATCTCTCTGCACCTTCAC 59.833 50.000 0.00 0.00 0.00 3.18
1158 1341 5.048153 TCTTCCTATCGTCTTATGCATCG 57.952 43.478 0.19 0.00 0.00 3.84
1163 1346 5.358160 TCCTATCGTCTTATGCATCGATGAT 59.642 40.000 29.20 24.39 41.85 2.45
1164 1347 6.542370 TCCTATCGTCTTATGCATCGATGATA 59.458 38.462 29.20 24.25 41.85 2.15
1165 1348 6.634837 CCTATCGTCTTATGCATCGATGATAC 59.365 42.308 29.20 11.84 41.85 2.24
1178 1361 3.065786 TCGATGATACTACCACGGTTCAC 59.934 47.826 0.00 0.00 0.00 3.18
1179 1362 3.714391 GATGATACTACCACGGTTCACC 58.286 50.000 0.00 0.00 0.00 4.02
1196 1379 2.610694 CCGCTATGCCTGCCATTCG 61.611 63.158 0.00 0.00 35.34 3.34
1229 1412 6.240894 TGTTCTTGATATGCTTCTCCAAGTT 58.759 36.000 0.00 0.00 36.53 2.66
1232 1415 7.383102 TCTTGATATGCTTCTCCAAGTTTTC 57.617 36.000 0.00 0.00 36.53 2.29
1284 1468 5.907866 TGTGAGATCAGTAATTACACGGA 57.092 39.130 17.65 11.72 31.10 4.69
1285 1469 5.891451 TGTGAGATCAGTAATTACACGGAG 58.109 41.667 17.65 2.70 31.10 4.63
1308 1492 5.825679 AGTAGGTTTTATCAGCACAAACACA 59.174 36.000 0.00 0.00 32.92 3.72
1309 1493 5.590530 AGGTTTTATCAGCACAAACACAA 57.409 34.783 0.00 0.00 32.92 3.33
1310 1494 5.971763 AGGTTTTATCAGCACAAACACAAA 58.028 33.333 0.00 0.00 32.92 2.83
1311 1495 5.810074 AGGTTTTATCAGCACAAACACAAAC 59.190 36.000 0.00 0.00 32.92 2.93
1312 1496 5.578727 GGTTTTATCAGCACAAACACAAACA 59.421 36.000 0.00 0.00 32.92 2.83
1313 1497 6.454981 GGTTTTATCAGCACAAACACAAACAC 60.455 38.462 0.00 0.00 32.92 3.32
1314 1498 2.645730 TCAGCACAAACACAAACACC 57.354 45.000 0.00 0.00 0.00 4.16
1315 1499 1.203523 TCAGCACAAACACAAACACCC 59.796 47.619 0.00 0.00 0.00 4.61
1316 1500 1.067283 CAGCACAAACACAAACACCCA 60.067 47.619 0.00 0.00 0.00 4.51
1317 1501 1.620819 AGCACAAACACAAACACCCAA 59.379 42.857 0.00 0.00 0.00 4.12
1318 1502 1.729517 GCACAAACACAAACACCCAAC 59.270 47.619 0.00 0.00 0.00 3.77
1319 1503 1.989165 CACAAACACAAACACCCAACG 59.011 47.619 0.00 0.00 0.00 4.10
1320 1504 1.067495 ACAAACACAAACACCCAACGG 60.067 47.619 0.00 0.00 0.00 4.44
1321 1505 0.108567 AAACACAAACACCCAACGGC 60.109 50.000 0.00 0.00 0.00 5.68
1322 1506 2.025441 CACAAACACCCAACGGCG 59.975 61.111 4.80 4.80 0.00 6.46
1323 1507 3.213402 ACAAACACCCAACGGCGG 61.213 61.111 13.24 0.00 0.00 6.13
1324 1508 2.902846 CAAACACCCAACGGCGGA 60.903 61.111 13.24 0.00 0.00 5.54
1325 1509 2.593436 AAACACCCAACGGCGGAG 60.593 61.111 13.24 2.29 0.00 4.63
1375 1559 4.127566 CCCCCAATATTGAAGCAACTTG 57.872 45.455 17.23 0.00 0.00 3.16
1376 1560 3.515104 CCCCCAATATTGAAGCAACTTGT 59.485 43.478 17.23 0.00 0.00 3.16
1377 1561 4.497300 CCCCAATATTGAAGCAACTTGTG 58.503 43.478 17.23 0.00 0.00 3.33
1378 1562 4.220382 CCCCAATATTGAAGCAACTTGTGA 59.780 41.667 17.23 0.00 0.00 3.58
1379 1563 5.279406 CCCCAATATTGAAGCAACTTGTGAA 60.279 40.000 17.23 0.00 0.00 3.18
1380 1564 5.865552 CCCAATATTGAAGCAACTTGTGAAG 59.134 40.000 17.23 0.00 0.00 3.02
1381 1565 6.294675 CCCAATATTGAAGCAACTTGTGAAGA 60.295 38.462 17.23 0.00 0.00 2.87
1382 1566 7.147312 CCAATATTGAAGCAACTTGTGAAGAA 58.853 34.615 17.23 0.00 0.00 2.52
1383 1567 7.652909 CCAATATTGAAGCAACTTGTGAAGAAA 59.347 33.333 17.23 0.00 0.00 2.52
1384 1568 9.033481 CAATATTGAAGCAACTTGTGAAGAAAA 57.967 29.630 10.04 0.00 0.00 2.29
1385 1569 9.768662 AATATTGAAGCAACTTGTGAAGAAAAT 57.231 25.926 0.00 0.00 0.00 1.82
1388 1572 9.768662 ATTGAAGCAACTTGTGAAGAAAATATT 57.231 25.926 0.00 0.00 0.00 1.28
1389 1573 8.578308 TGAAGCAACTTGTGAAGAAAATATTG 57.422 30.769 0.00 0.00 0.00 1.90
1390 1574 7.169645 TGAAGCAACTTGTGAAGAAAATATTGC 59.830 33.333 0.00 0.00 40.09 3.56
1391 1575 6.752168 AGCAACTTGTGAAGAAAATATTGCT 58.248 32.000 1.97 1.97 43.93 3.91
1392 1576 6.643770 AGCAACTTGTGAAGAAAATATTGCTG 59.356 34.615 6.83 0.00 46.17 4.41
1393 1577 6.421801 GCAACTTGTGAAGAAAATATTGCTGT 59.578 34.615 0.00 0.00 37.52 4.40
1394 1578 7.568134 GCAACTTGTGAAGAAAATATTGCTGTG 60.568 37.037 0.00 0.00 37.52 3.66
1395 1579 7.275888 ACTTGTGAAGAAAATATTGCTGTGA 57.724 32.000 0.00 0.00 0.00 3.58
1396 1580 7.889469 ACTTGTGAAGAAAATATTGCTGTGAT 58.111 30.769 0.00 0.00 0.00 3.06
1397 1581 7.811236 ACTTGTGAAGAAAATATTGCTGTGATG 59.189 33.333 0.00 0.00 0.00 3.07
1398 1582 6.623486 TGTGAAGAAAATATTGCTGTGATGG 58.377 36.000 0.00 0.00 0.00 3.51
1399 1583 6.209192 TGTGAAGAAAATATTGCTGTGATGGT 59.791 34.615 0.00 0.00 0.00 3.55
1400 1584 7.092716 GTGAAGAAAATATTGCTGTGATGGTT 58.907 34.615 0.00 0.00 0.00 3.67
1401 1585 7.599998 GTGAAGAAAATATTGCTGTGATGGTTT 59.400 33.333 0.00 0.00 0.00 3.27
1402 1586 8.801299 TGAAGAAAATATTGCTGTGATGGTTTA 58.199 29.630 0.00 0.00 0.00 2.01
1403 1587 9.294030 GAAGAAAATATTGCTGTGATGGTTTAG 57.706 33.333 0.00 0.00 0.00 1.85
1684 1868 3.814504 ATTCATATCCCCCAGCGAATT 57.185 42.857 0.00 0.00 0.00 2.17
1685 1869 2.859165 TCATATCCCCCAGCGAATTC 57.141 50.000 0.00 0.00 0.00 2.17
1686 1870 2.338809 TCATATCCCCCAGCGAATTCT 58.661 47.619 3.52 0.00 0.00 2.40
1687 1871 2.038952 TCATATCCCCCAGCGAATTCTG 59.961 50.000 3.52 0.00 0.00 3.02
1688 1872 1.507140 TATCCCCCAGCGAATTCTGT 58.493 50.000 3.52 0.00 32.32 3.41
1689 1873 0.181350 ATCCCCCAGCGAATTCTGTC 59.819 55.000 3.52 0.00 32.32 3.51
1690 1874 0.909610 TCCCCCAGCGAATTCTGTCT 60.910 55.000 3.52 0.00 32.32 3.41
1691 1875 0.830648 CCCCCAGCGAATTCTGTCTA 59.169 55.000 3.52 0.00 32.32 2.59
1692 1876 1.202580 CCCCCAGCGAATTCTGTCTAG 60.203 57.143 3.52 0.00 32.32 2.43
1693 1877 1.576356 CCCAGCGAATTCTGTCTAGC 58.424 55.000 3.52 0.00 32.32 3.42
1694 1878 1.137872 CCCAGCGAATTCTGTCTAGCT 59.862 52.381 3.52 0.59 35.06 3.32
1695 1879 2.468831 CCAGCGAATTCTGTCTAGCTC 58.531 52.381 3.52 0.00 32.05 4.09
1696 1880 2.468831 CAGCGAATTCTGTCTAGCTCC 58.531 52.381 3.52 0.00 32.05 4.70
1697 1881 1.066303 AGCGAATTCTGTCTAGCTCCG 59.934 52.381 3.52 0.00 0.00 4.63
1698 1882 1.482278 CGAATTCTGTCTAGCTCCGC 58.518 55.000 3.52 0.00 0.00 5.54
1699 1883 1.859383 GAATTCTGTCTAGCTCCGCC 58.141 55.000 0.00 0.00 0.00 6.13
1700 1884 1.137086 GAATTCTGTCTAGCTCCGCCA 59.863 52.381 0.00 0.00 0.00 5.69
1701 1885 0.461961 ATTCTGTCTAGCTCCGCCAC 59.538 55.000 0.00 0.00 0.00 5.01
1702 1886 0.612174 TTCTGTCTAGCTCCGCCACT 60.612 55.000 0.00 0.00 0.00 4.00
1703 1887 1.140589 CTGTCTAGCTCCGCCACTG 59.859 63.158 0.00 0.00 0.00 3.66
1704 1888 2.202810 GTCTAGCTCCGCCACTGC 60.203 66.667 0.00 0.00 0.00 4.40
1705 1889 2.679996 TCTAGCTCCGCCACTGCA 60.680 61.111 0.00 0.00 37.32 4.41
1706 1890 2.265739 CTAGCTCCGCCACTGCAA 59.734 61.111 0.00 0.00 37.32 4.08
1707 1891 1.375908 CTAGCTCCGCCACTGCAAA 60.376 57.895 0.00 0.00 37.32 3.68
1708 1892 1.639298 CTAGCTCCGCCACTGCAAAC 61.639 60.000 0.00 0.00 37.32 2.93
1709 1893 2.390306 TAGCTCCGCCACTGCAAACA 62.390 55.000 0.00 0.00 37.32 2.83
1710 1894 2.639286 CTCCGCCACTGCAAACAC 59.361 61.111 0.00 0.00 37.32 3.32
1717 1901 1.361271 CACTGCAAACACCCTGCTG 59.639 57.895 0.00 0.82 42.53 4.41
1734 1918 3.801698 TGCTGATCCTATTCTCACAAGC 58.198 45.455 0.00 0.00 0.00 4.01
1756 1940 4.142182 GCCATGCAGCTTTAGGTGATTTTA 60.142 41.667 12.77 0.00 45.66 1.52
1758 1942 4.701956 TGCAGCTTTAGGTGATTTTAGC 57.298 40.909 12.77 0.00 45.66 3.09
1794 1979 9.979578 AAGTTTACAAGCAATTTTCACATATGA 57.020 25.926 10.38 0.00 0.00 2.15
1797 1982 6.897259 ACAAGCAATTTTCACATATGATGC 57.103 33.333 10.38 7.83 37.38 3.91
1821 2006 7.492994 TGCGCAACACAGATTATGTAGTTATAA 59.507 33.333 8.16 0.00 41.41 0.98
1822 2007 8.495949 GCGCAACACAGATTATGTAGTTATAAT 58.504 33.333 0.30 0.00 41.41 1.28
1874 2060 4.065789 AGCAAGTAGGCACAAGTAACTTC 58.934 43.478 0.00 0.00 35.83 3.01
1877 2063 4.910458 AGTAGGCACAAGTAACTTCCAT 57.090 40.909 0.00 0.00 0.00 3.41
1936 2122 6.347644 GGGTAACGTGTACATCTAACCAAAAC 60.348 42.308 17.12 2.57 37.60 2.43
2004 2190 8.079203 CCATCTAGCTGAACTACTAGTAACATG 58.921 40.741 3.76 0.00 37.67 3.21
2040 2226 2.666508 CACCGAATCACGTAAGGAGTTG 59.333 50.000 0.00 0.00 46.39 3.16
2057 2243 2.230508 AGTTGCATCATGGTTTGCTCAG 59.769 45.455 14.41 0.00 39.60 3.35
2087 2273 1.346068 CCTAGCAACCCTATCAGAGGC 59.654 57.143 0.00 0.00 45.17 4.70
2154 2340 4.607239 AGAATTGTTCCATTCTCCATGCT 58.393 39.130 0.00 0.00 32.09 3.79
2157 2343 3.159213 TGTTCCATTCTCCATGCTTGT 57.841 42.857 0.00 0.00 0.00 3.16
2206 2429 1.302832 CCGGCCTCTGAAAACAGCT 60.303 57.895 0.00 0.00 0.00 4.24
2220 2443 1.600076 CAGCTGCAGCAGGACAAGT 60.600 57.895 38.24 14.33 45.16 3.16
2225 2448 2.034558 GCTGCAGCAGGACAAGTAAAAA 59.965 45.455 33.36 0.00 41.59 1.94
2226 2449 3.305608 GCTGCAGCAGGACAAGTAAAAAT 60.306 43.478 33.36 0.00 41.59 1.82
2228 2451 3.005684 TGCAGCAGGACAAGTAAAAATGG 59.994 43.478 0.00 0.00 0.00 3.16
2229 2452 3.614870 GCAGCAGGACAAGTAAAAATGGG 60.615 47.826 0.00 0.00 0.00 4.00
2230 2453 2.562738 AGCAGGACAAGTAAAAATGGGC 59.437 45.455 0.00 0.00 0.00 5.36
2231 2454 2.298729 GCAGGACAAGTAAAAATGGGCA 59.701 45.455 0.00 0.00 0.00 5.36
2232 2455 3.860754 GCAGGACAAGTAAAAATGGGCAC 60.861 47.826 0.00 0.00 0.00 5.01
2233 2456 3.320541 CAGGACAAGTAAAAATGGGCACA 59.679 43.478 0.00 0.00 0.00 4.57
2234 2457 4.021192 CAGGACAAGTAAAAATGGGCACAT 60.021 41.667 0.00 0.00 39.54 3.21
2235 2458 4.021192 AGGACAAGTAAAAATGGGCACATG 60.021 41.667 0.00 0.00 37.40 3.21
2236 2459 4.021544 GGACAAGTAAAAATGGGCACATGA 60.022 41.667 0.00 0.00 37.40 3.07
2237 2460 5.138125 ACAAGTAAAAATGGGCACATGAG 57.862 39.130 0.00 0.00 37.40 2.90
2324 2853 8.691727 CGCGATATGTAGCAATTATATAAGTCC 58.308 37.037 0.00 0.00 0.00 3.85
2335 2864 7.043590 GCAATTATATAAGTCCGCGATAACGAT 60.044 37.037 8.23 4.99 42.66 3.73
2349 2878 0.999406 AACGATGAGAAATGCGACGG 59.001 50.000 0.00 0.00 0.00 4.79
2371 2910 0.461693 GCTGGATGACTGTCAGGAGC 60.462 60.000 16.46 17.02 0.00 4.70
2382 2921 4.033709 ACTGTCAGGAGCATGGTACTAAT 58.966 43.478 9.87 0.00 0.00 1.73
2396 2939 5.030147 TGGTACTAATTGTCCCTGATGACT 58.970 41.667 0.00 0.00 36.21 3.41
2420 2975 5.799213 AGTAGGTGAAGAACTGAAGATTGG 58.201 41.667 0.00 0.00 0.00 3.16
2455 3722 7.831691 TTCAGGTCATGAAACTGGAAATAAA 57.168 32.000 21.80 9.95 45.00 1.40
2485 3752 1.818555 GGTCGCGGGTACTGGTAAT 59.181 57.895 6.13 0.00 33.56 1.89
2486 3753 0.176449 GGTCGCGGGTACTGGTAATT 59.824 55.000 6.13 0.00 33.56 1.40
2489 3756 2.743664 GTCGCGGGTACTGGTAATTTTT 59.256 45.455 6.13 0.00 33.56 1.94
2550 3985 7.650504 GGGTTAATTGTTGTTCAACTTCTTACC 59.349 37.037 15.18 14.89 38.97 2.85
2551 3986 8.410912 GGTTAATTGTTGTTCAACTTCTTACCT 58.589 33.333 15.18 0.00 38.97 3.08
2552 3987 9.797556 GTTAATTGTTGTTCAACTTCTTACCTT 57.202 29.630 15.18 2.80 38.97 3.50
2553 3988 9.796120 TTAATTGTTGTTCAACTTCTTACCTTG 57.204 29.630 15.18 0.00 38.97 3.61
2554 3989 7.639113 ATTGTTGTTCAACTTCTTACCTTGA 57.361 32.000 15.18 0.00 38.97 3.02
2555 3990 7.639113 TTGTTGTTCAACTTCTTACCTTGAT 57.361 32.000 15.18 0.00 0.00 2.57
2556 3991 8.740123 TTGTTGTTCAACTTCTTACCTTGATA 57.260 30.769 15.18 0.00 0.00 2.15
2604 4039 0.946528 TCAAGTGCTCATGTGTGTGC 59.053 50.000 0.00 0.00 43.34 4.57
2609 4044 1.223417 TGCTCATGTGTGTGCGACTG 61.223 55.000 0.00 0.00 45.37 3.51
2612 4047 1.082561 CATGTGTGTGCGACTGTGC 60.083 57.895 0.00 0.00 0.00 4.57
2640 4075 8.938906 TGTTAATAATTTCAGGAACGGTCTTAC 58.061 33.333 0.00 0.00 0.00 2.34
2675 4110 2.256461 GAAGCTGTTGCGCCAAGG 59.744 61.111 4.18 0.00 45.42 3.61
2705 4140 4.225497 GCTTCAGCGCCCTGTTAT 57.775 55.556 2.29 0.00 40.09 1.89
2706 4141 2.482326 GCTTCAGCGCCCTGTTATT 58.518 52.632 2.29 0.00 40.09 1.40
3121 4556 1.133869 GCGCGCGTTTCATAGGTTT 59.866 52.632 32.35 0.00 0.00 3.27
3131 4566 1.448985 TCATAGGTTTCAAGCCACGC 58.551 50.000 0.00 0.00 0.00 5.34
3156 4591 2.277591 CCCCCGTACACTCGTCCAA 61.278 63.158 0.00 0.00 0.00 3.53
3243 4681 3.131478 AACCGCCGCAGCATTACC 61.131 61.111 0.00 0.00 39.83 2.85
3295 4733 1.969064 CGCAAATGGACAACCCGGA 60.969 57.895 0.73 0.00 37.93 5.14
3329 4767 3.118112 AGCCGATTCAAGAACCTGATCAT 60.118 43.478 0.00 0.00 0.00 2.45
3405 4843 2.691409 CAGAGGCGGTTCTGGATAAA 57.309 50.000 4.17 0.00 40.69 1.40
3441 4879 3.914426 TTGGACCTTAGATTCAGCCTC 57.086 47.619 0.00 0.00 0.00 4.70
3489 4927 2.389386 TTGGGATACGCGCAATGAC 58.611 52.632 5.73 0.00 43.53 3.06
3580 5018 5.819991 TCCTCTCCATTTAAGCTGAATTGT 58.180 37.500 5.23 0.00 0.00 2.71
3653 5091 2.274760 GCTGCAGCCCCTTCATCT 59.725 61.111 28.76 0.00 34.31 2.90
3958 5396 1.222113 GCCTAGTCCTCCAACTGCC 59.778 63.158 0.00 0.00 0.00 4.85
4027 5465 0.179073 CTTCCTCGTCGGCATTCCAT 60.179 55.000 0.00 0.00 0.00 3.41
4053 5491 8.664211 AGAAAGTTTCTTCTTAGTTTGTCGAT 57.336 30.769 12.50 0.00 36.36 3.59
4100 5540 4.212214 GTGCAAAGATCGTCAGAAAGAAGT 59.788 41.667 0.00 0.00 0.00 3.01
4101 5541 4.449068 TGCAAAGATCGTCAGAAAGAAGTC 59.551 41.667 0.00 0.00 0.00 3.01
4102 5542 4.449068 GCAAAGATCGTCAGAAAGAAGTCA 59.551 41.667 0.00 0.00 0.00 3.41
4103 5543 5.613577 GCAAAGATCGTCAGAAAGAAGTCAC 60.614 44.000 0.00 0.00 0.00 3.67
4104 5544 4.855715 AGATCGTCAGAAAGAAGTCACA 57.144 40.909 0.00 0.00 0.00 3.58
4105 5545 5.398603 AGATCGTCAGAAAGAAGTCACAT 57.601 39.130 0.00 0.00 0.00 3.21
4106 5546 5.167121 AGATCGTCAGAAAGAAGTCACATG 58.833 41.667 0.00 0.00 0.00 3.21
4107 5547 3.653344 TCGTCAGAAAGAAGTCACATGG 58.347 45.455 0.00 0.00 0.00 3.66
4108 5548 3.320826 TCGTCAGAAAGAAGTCACATGGA 59.679 43.478 0.00 0.00 0.00 3.41
4109 5549 4.021104 TCGTCAGAAAGAAGTCACATGGAT 60.021 41.667 0.00 0.00 0.00 3.41
4110 5550 4.692625 CGTCAGAAAGAAGTCACATGGATT 59.307 41.667 0.00 0.00 0.00 3.01
4124 5564 3.941483 ACATGGATTTCTTGGTGATCGAC 59.059 43.478 0.00 0.00 0.00 4.20
4164 5608 5.639757 CATGCACGTGGATTTCTTAATTCA 58.360 37.500 20.84 2.87 0.00 2.57
4174 5618 5.760253 GGATTTCTTAATTCATCTCGCCTGA 59.240 40.000 0.00 0.00 0.00 3.86
4175 5619 6.260936 GGATTTCTTAATTCATCTCGCCTGAA 59.739 38.462 0.00 0.00 37.06 3.02
4176 5620 7.201732 GGATTTCTTAATTCATCTCGCCTGAAA 60.202 37.037 0.00 0.00 36.30 2.69
4177 5621 7.630242 TTTCTTAATTCATCTCGCCTGAAAT 57.370 32.000 0.00 0.00 36.30 2.17
4178 5622 6.609237 TCTTAATTCATCTCGCCTGAAATG 57.391 37.500 0.00 0.00 36.30 2.32
4306 5750 2.202492 CAACGGGTCGCTCGAGAG 60.202 66.667 18.75 14.32 0.00 3.20
4319 5763 0.395862 TCGAGAGGGAGATGGTGGAC 60.396 60.000 0.00 0.00 0.00 4.02
4324 5768 2.512515 GGAGATGGTGGACTGCGC 60.513 66.667 0.00 0.00 0.00 6.09
4348 5792 0.806492 GGATCCTGAACTTCGACGGC 60.806 60.000 3.84 0.00 0.00 5.68
4370 5814 1.216064 TGAGATGGACCAATGGAGGG 58.784 55.000 6.16 0.00 0.00 4.30
4705 6149 4.718827 TTCCCGGCCCCGAACCTA 62.719 66.667 8.54 0.00 42.83 3.08
4711 6155 2.660258 CGGCCCCGAACCTATTCAGG 62.660 65.000 0.00 0.00 44.44 3.86
4874 6318 2.098934 GCCAACACATGTCTTTGTCACA 59.901 45.455 13.31 0.00 0.00 3.58
4879 6323 4.985413 ACACATGTCTTTGTCACAACAAG 58.015 39.130 0.00 0.00 45.72 3.16
4913 6564 5.918426 TGCCATGAATTAATGTGTGTGAT 57.082 34.783 2.00 0.00 0.00 3.06
5214 6868 2.029844 GTTCTGGCTGTGGACGCTC 61.030 63.158 0.00 0.00 0.00 5.03
5831 7488 2.311688 ATCACCGATCCCCGCAAGAC 62.312 60.000 0.00 0.00 43.02 3.01
5838 7495 2.615227 ATCCCCGCAAGACCATCTGC 62.615 60.000 0.00 0.00 43.02 4.26
5839 7496 3.197790 CCCGCAAGACCATCTGCG 61.198 66.667 9.35 9.35 40.78 5.18
5840 7497 3.869272 CCGCAAGACCATCTGCGC 61.869 66.667 10.74 0.00 40.24 6.09
5841 7498 3.869272 CGCAAGACCATCTGCGCC 61.869 66.667 4.18 0.00 37.27 6.53
5842 7499 3.869272 GCAAGACCATCTGCGCCG 61.869 66.667 4.18 0.00 0.00 6.46
5843 7500 3.197790 CAAGACCATCTGCGCCGG 61.198 66.667 4.18 0.00 0.00 6.13
5962 7619 3.778954 ACTTCTGACTTTCCTTCCCAG 57.221 47.619 0.00 0.00 0.00 4.45
5971 7628 2.045536 CCTTCCCAGAGCACAGGC 60.046 66.667 0.00 0.00 41.61 4.85
6007 7664 3.567797 GCCTGCTGATCGAACGGC 61.568 66.667 18.75 18.75 41.89 5.68
6018 7675 0.376152 TCGAACGGCGTAGATGAGAC 59.624 55.000 15.20 0.00 41.80 3.36
6025 7682 2.602878 GGCGTAGATGAGACGTTCAAA 58.397 47.619 0.00 0.00 42.31 2.69
6031 7688 6.129009 GCGTAGATGAGACGTTCAAAGTTTTA 60.129 38.462 0.00 0.00 42.31 1.52
6105 7948 7.118971 GCTGCCCACTTCATTAATATAGAGAAG 59.881 40.741 9.71 9.71 41.00 2.85
6107 7950 8.713971 TGCCCACTTCATTAATATAGAGAAGAA 58.286 33.333 15.62 1.42 39.10 2.52
6108 7951 9.732130 GCCCACTTCATTAATATAGAGAAGAAT 57.268 33.333 15.62 0.00 39.10 2.40
6124 7967 8.140112 AGAGAAGAATAGAAAAGAGTAAGGCA 57.860 34.615 0.00 0.00 0.00 4.75
6125 7968 8.598041 AGAGAAGAATAGAAAAGAGTAAGGCAA 58.402 33.333 0.00 0.00 0.00 4.52
6126 7969 9.220767 GAGAAGAATAGAAAAGAGTAAGGCAAA 57.779 33.333 0.00 0.00 0.00 3.68
6127 7970 9.574516 AGAAGAATAGAAAAGAGTAAGGCAAAA 57.425 29.630 0.00 0.00 0.00 2.44
6164 8007 8.839310 AAATTACTTCCTCTAATCCATCATCG 57.161 34.615 0.00 0.00 0.00 3.84
6165 8008 7.782897 ATTACTTCCTCTAATCCATCATCGA 57.217 36.000 0.00 0.00 0.00 3.59
6166 8009 5.720371 ACTTCCTCTAATCCATCATCGAG 57.280 43.478 0.00 0.00 0.00 4.04
6167 8010 5.144100 ACTTCCTCTAATCCATCATCGAGT 58.856 41.667 0.00 0.00 0.00 4.18
6168 8011 5.010516 ACTTCCTCTAATCCATCATCGAGTG 59.989 44.000 0.00 0.00 0.00 3.51
6169 8012 4.474394 TCCTCTAATCCATCATCGAGTGT 58.526 43.478 0.00 0.00 0.00 3.55
6170 8013 4.895889 TCCTCTAATCCATCATCGAGTGTT 59.104 41.667 0.00 0.00 0.00 3.32
6171 8014 6.068670 TCCTCTAATCCATCATCGAGTGTTA 58.931 40.000 0.00 0.00 0.00 2.41
6172 8015 6.207614 TCCTCTAATCCATCATCGAGTGTTAG 59.792 42.308 0.00 0.00 0.00 2.34
6173 8016 6.207614 CCTCTAATCCATCATCGAGTGTTAGA 59.792 42.308 0.00 0.80 0.00 2.10
6174 8017 7.093988 CCTCTAATCCATCATCGAGTGTTAGAT 60.094 40.741 0.00 0.00 0.00 1.98
6175 8018 8.863872 TCTAATCCATCATCGAGTGTTAGATA 57.136 34.615 0.00 0.00 0.00 1.98
6176 8019 8.731605 TCTAATCCATCATCGAGTGTTAGATAC 58.268 37.037 0.00 0.00 0.00 2.24
6177 8020 6.901081 ATCCATCATCGAGTGTTAGATACA 57.099 37.500 0.00 0.00 0.00 2.29
6178 8021 6.901081 TCCATCATCGAGTGTTAGATACAT 57.099 37.500 0.00 0.00 39.39 2.29
6179 8022 6.914259 TCCATCATCGAGTGTTAGATACATC 58.086 40.000 0.00 0.00 39.39 3.06
6180 8023 6.071896 TCCATCATCGAGTGTTAGATACATCC 60.072 42.308 0.00 0.00 39.39 3.51
6181 8024 6.294731 CCATCATCGAGTGTTAGATACATCCA 60.295 42.308 0.00 0.00 39.39 3.41
6182 8025 6.901081 TCATCGAGTGTTAGATACATCCAT 57.099 37.500 0.00 0.00 39.39 3.41
6183 8026 7.996098 TCATCGAGTGTTAGATACATCCATA 57.004 36.000 0.00 0.00 39.39 2.74
6184 8027 8.581253 TCATCGAGTGTTAGATACATCCATAT 57.419 34.615 0.00 0.00 39.39 1.78
6185 8028 8.678199 TCATCGAGTGTTAGATACATCCATATC 58.322 37.037 0.00 0.00 39.39 1.63
6186 8029 8.681806 CATCGAGTGTTAGATACATCCATATCT 58.318 37.037 0.00 1.26 43.08 1.98
6187 8030 9.907229 ATCGAGTGTTAGATACATCCATATCTA 57.093 33.333 0.00 0.00 41.29 1.98
6188 8031 9.384764 TCGAGTGTTAGATACATCCATATCTAG 57.615 37.037 3.45 0.00 42.43 2.43
6189 8032 9.384764 CGAGTGTTAGATACATCCATATCTAGA 57.615 37.037 0.00 0.00 42.43 2.43
6201 8044 9.553064 ACATCCATATCTAGACAAATTCAAGAC 57.447 33.333 0.00 0.00 0.00 3.01
6202 8045 9.551734 CATCCATATCTAGACAAATTCAAGACA 57.448 33.333 0.00 0.00 0.00 3.41
6203 8046 9.775854 ATCCATATCTAGACAAATTCAAGACAG 57.224 33.333 0.00 0.00 0.00 3.51
6204 8047 8.981659 TCCATATCTAGACAAATTCAAGACAGA 58.018 33.333 0.00 0.00 0.00 3.41
6205 8048 9.775854 CCATATCTAGACAAATTCAAGACAGAT 57.224 33.333 0.00 0.00 0.00 2.90
6217 8060 9.793252 AAATTCAAGACAGATAATTTGAATCGG 57.207 29.630 10.59 0.00 44.85 4.18
6218 8061 6.925610 TCAAGACAGATAATTTGAATCGGG 57.074 37.500 0.00 0.00 0.00 5.14
6219 8062 5.822519 TCAAGACAGATAATTTGAATCGGGG 59.177 40.000 0.00 0.00 0.00 5.73
6220 8063 4.718961 AGACAGATAATTTGAATCGGGGG 58.281 43.478 0.00 0.00 0.00 5.40
6235 8078 2.717958 GGGGGTTACATCCAAGGGA 58.282 57.895 0.00 0.00 35.55 4.20
6236 8079 1.231963 GGGGGTTACATCCAAGGGAT 58.768 55.000 0.00 0.00 44.21 3.85
6237 8080 1.573857 GGGGGTTACATCCAAGGGATT 59.426 52.381 0.00 0.00 39.79 3.01
6238 8081 2.787035 GGGGGTTACATCCAAGGGATTA 59.213 50.000 0.00 0.00 39.79 1.75
6239 8082 3.436035 GGGGGTTACATCCAAGGGATTAC 60.436 52.174 0.00 0.00 39.79 1.89
6240 8083 3.203487 GGGGTTACATCCAAGGGATTACA 59.797 47.826 0.00 0.00 39.79 2.41
6241 8084 4.141018 GGGGTTACATCCAAGGGATTACAT 60.141 45.833 0.00 0.00 39.79 2.29
6242 8085 5.070685 GGGTTACATCCAAGGGATTACATC 58.929 45.833 0.00 0.00 39.79 3.06
6243 8086 5.163088 GGGTTACATCCAAGGGATTACATCT 60.163 44.000 0.00 0.00 39.79 2.90
6244 8087 5.998363 GGTTACATCCAAGGGATTACATCTC 59.002 44.000 0.00 0.00 39.79 2.75
6245 8088 6.183361 GGTTACATCCAAGGGATTACATCTCT 60.183 42.308 0.00 0.00 43.44 3.10
6246 8089 7.016268 GGTTACATCCAAGGGATTACATCTCTA 59.984 40.741 0.00 0.00 39.80 2.43
6247 8090 6.678568 ACATCCAAGGGATTACATCTCTAG 57.321 41.667 0.00 0.00 39.80 2.43
6248 8091 6.385443 ACATCCAAGGGATTACATCTCTAGA 58.615 40.000 0.00 0.00 39.80 2.43
6256 8099 7.129425 AGGGATTACATCTCTAGAGAAACACT 58.871 38.462 25.77 11.83 38.65 3.55
6364 8207 7.482474 CATGACATGCCATTGTGATTAAACTA 58.518 34.615 1.71 0.00 0.00 2.24
6472 8316 0.393402 TAGCTCCAACGCTCCGACTA 60.393 55.000 0.00 0.00 41.30 2.59
6550 8396 7.606858 TGTTGATGCTTTTGAAAAATGTTCA 57.393 28.000 0.00 0.00 0.00 3.18
6688 8538 6.271396 TCATGATTTTGAAAACTGTTTGCG 57.729 33.333 6.53 0.00 0.00 4.85
6704 8554 6.803320 ACTGTTTGCGTATTCAAAGAATGATG 59.197 34.615 2.65 0.00 38.03 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.342308 CCATGAACTTATTGTCTTACATGGTAT 57.658 33.333 0.00 0.00 44.51 2.73
2 3 7.630242 CCATGAACTTATTGTCTTACATGGT 57.370 36.000 0.00 0.00 44.51 3.55
4 5 8.184192 GGTTCCATGAACTTATTGTCTTACATG 58.816 37.037 6.89 0.00 41.70 3.21
5 6 7.888021 TGGTTCCATGAACTTATTGTCTTACAT 59.112 33.333 6.89 0.00 41.70 2.29
7 8 7.626452 GCTGGTTCCATGAACTTATTGTCTTAC 60.626 40.741 6.89 0.00 41.70 2.34
8 9 6.374333 GCTGGTTCCATGAACTTATTGTCTTA 59.626 38.462 6.89 0.00 41.70 2.10
9 10 5.183904 GCTGGTTCCATGAACTTATTGTCTT 59.816 40.000 6.89 0.00 41.70 3.01
10 11 4.702131 GCTGGTTCCATGAACTTATTGTCT 59.298 41.667 6.89 0.00 41.70 3.41
11 12 4.458989 TGCTGGTTCCATGAACTTATTGTC 59.541 41.667 6.89 0.00 41.70 3.18
12 13 4.218417 GTGCTGGTTCCATGAACTTATTGT 59.782 41.667 6.89 0.00 41.70 2.71
13 14 4.218200 TGTGCTGGTTCCATGAACTTATTG 59.782 41.667 6.89 0.00 41.70 1.90
14 15 4.406456 TGTGCTGGTTCCATGAACTTATT 58.594 39.130 6.89 0.00 41.70 1.40
15 16 4.032960 TGTGCTGGTTCCATGAACTTAT 57.967 40.909 6.89 0.00 41.70 1.73
16 17 3.500448 TGTGCTGGTTCCATGAACTTA 57.500 42.857 6.89 0.00 41.70 2.24
17 18 2.362077 GTTGTGCTGGTTCCATGAACTT 59.638 45.455 6.89 0.00 41.70 2.66
18 19 1.956477 GTTGTGCTGGTTCCATGAACT 59.044 47.619 6.89 0.00 41.70 3.01
19 20 1.000274 GGTTGTGCTGGTTCCATGAAC 60.000 52.381 0.00 0.00 41.32 3.18
20 21 1.327303 GGTTGTGCTGGTTCCATGAA 58.673 50.000 0.00 0.00 0.00 2.57
21 22 0.539438 GGGTTGTGCTGGTTCCATGA 60.539 55.000 0.00 0.00 0.00 3.07
22 23 0.540365 AGGGTTGTGCTGGTTCCATG 60.540 55.000 0.00 0.00 0.00 3.66
23 24 0.251341 GAGGGTTGTGCTGGTTCCAT 60.251 55.000 0.00 0.00 0.00 3.41
24 25 1.150536 GAGGGTTGTGCTGGTTCCA 59.849 57.895 0.00 0.00 0.00 3.53
25 26 0.690762 TAGAGGGTTGTGCTGGTTCC 59.309 55.000 0.00 0.00 0.00 3.62
26 27 1.339151 CCTAGAGGGTTGTGCTGGTTC 60.339 57.143 0.00 0.00 0.00 3.62
27 28 0.693049 CCTAGAGGGTTGTGCTGGTT 59.307 55.000 0.00 0.00 0.00 3.67
28 29 2.377136 CCTAGAGGGTTGTGCTGGT 58.623 57.895 0.00 0.00 0.00 4.00
39 40 2.252714 GAGATAAGCCACCCCTAGAGG 58.747 57.143 0.00 0.00 0.00 3.69
40 41 2.964209 TGAGATAAGCCACCCCTAGAG 58.036 52.381 0.00 0.00 0.00 2.43
41 42 3.637821 ATGAGATAAGCCACCCCTAGA 57.362 47.619 0.00 0.00 0.00 2.43
42 43 7.682787 ATATAATGAGATAAGCCACCCCTAG 57.317 40.000 0.00 0.00 0.00 3.02
44 45 9.744125 TTATATATAATGAGATAAGCCACCCCT 57.256 33.333 0.81 0.00 0.00 4.79
66 67 9.866798 TGTACGTATTGTAACACAACCATTATA 57.133 29.630 0.00 0.00 41.40 0.98
67 68 8.774890 TGTACGTATTGTAACACAACCATTAT 57.225 30.769 0.00 0.00 41.40 1.28
68 69 8.774890 ATGTACGTATTGTAACACAACCATTA 57.225 30.769 0.00 0.00 41.40 1.90
69 70 7.675962 ATGTACGTATTGTAACACAACCATT 57.324 32.000 0.00 0.00 41.40 3.16
70 71 7.493320 CCTATGTACGTATTGTAACACAACCAT 59.507 37.037 0.00 0.00 41.40 3.55
71 72 6.812656 CCTATGTACGTATTGTAACACAACCA 59.187 38.462 0.00 0.00 41.40 3.67
72 73 6.813152 ACCTATGTACGTATTGTAACACAACC 59.187 38.462 0.00 0.00 41.40 3.77
73 74 7.816945 ACCTATGTACGTATTGTAACACAAC 57.183 36.000 0.00 0.00 41.40 3.32
74 75 8.909708 GTACCTATGTACGTATTGTAACACAA 57.090 34.615 0.00 0.00 39.05 3.33
99 100 9.953697 GGAGTGTTAGACTATGTATAACTTCTG 57.046 37.037 13.79 0.00 39.84 3.02
100 101 9.696572 TGGAGTGTTAGACTATGTATAACTTCT 57.303 33.333 13.79 11.93 39.84 2.85
107 108 9.427821 AGAGAATTGGAGTGTTAGACTATGTAT 57.572 33.333 0.00 0.00 33.83 2.29
108 109 8.824756 AGAGAATTGGAGTGTTAGACTATGTA 57.175 34.615 0.00 0.00 33.83 2.29
109 110 7.617723 AGAGAGAATTGGAGTGTTAGACTATGT 59.382 37.037 0.00 0.00 33.83 2.29
110 111 7.920151 CAGAGAGAATTGGAGTGTTAGACTATG 59.080 40.741 0.00 0.00 33.83 2.23
111 112 7.417342 GCAGAGAGAATTGGAGTGTTAGACTAT 60.417 40.741 0.00 0.00 33.83 2.12
112 113 6.127591 GCAGAGAGAATTGGAGTGTTAGACTA 60.128 42.308 0.00 0.00 33.83 2.59
113 114 5.337169 GCAGAGAGAATTGGAGTGTTAGACT 60.337 44.000 0.00 0.00 37.76 3.24
114 115 4.867608 GCAGAGAGAATTGGAGTGTTAGAC 59.132 45.833 0.00 0.00 0.00 2.59
115 116 4.081420 GGCAGAGAGAATTGGAGTGTTAGA 60.081 45.833 0.00 0.00 0.00 2.10
116 117 4.081198 AGGCAGAGAGAATTGGAGTGTTAG 60.081 45.833 0.00 0.00 0.00 2.34
117 118 3.840666 AGGCAGAGAGAATTGGAGTGTTA 59.159 43.478 0.00 0.00 0.00 2.41
118 119 2.641815 AGGCAGAGAGAATTGGAGTGTT 59.358 45.455 0.00 0.00 0.00 3.32
119 120 2.264455 AGGCAGAGAGAATTGGAGTGT 58.736 47.619 0.00 0.00 0.00 3.55
120 121 3.347077 AAGGCAGAGAGAATTGGAGTG 57.653 47.619 0.00 0.00 0.00 3.51
121 122 3.308046 GGAAAGGCAGAGAGAATTGGAGT 60.308 47.826 0.00 0.00 0.00 3.85
134 135 1.613836 AAGTGCTCTTGGAAAGGCAG 58.386 50.000 0.00 0.00 45.90 4.85
186 188 3.508845 ACTTAGAAAGGGCTCTTGCAA 57.491 42.857 7.19 0.00 41.91 4.08
187 189 3.508845 AACTTAGAAAGGGCTCTTGCA 57.491 42.857 7.19 0.00 41.91 4.08
193 195 4.642466 ACTGCTAAACTTAGAAAGGGCT 57.358 40.909 0.54 0.00 32.47 5.19
194 196 5.707242 AAACTGCTAAACTTAGAAAGGGC 57.293 39.130 0.54 0.00 32.47 5.19
196 198 7.981102 AGGTAAACTGCTAAACTTAGAAAGG 57.019 36.000 0.54 0.00 32.47 3.11
202 204 8.562052 GTTGCTTTAGGTAAACTGCTAAACTTA 58.438 33.333 0.00 0.00 0.00 2.24
232 234 4.199310 TGATCCGATTTGAATGGTTCTCC 58.801 43.478 0.00 0.00 0.00 3.71
245 247 5.338219 GGGATTGATCTGATCTGATCCGATT 60.338 44.000 29.27 16.71 41.42 3.34
246 248 4.161942 GGGATTGATCTGATCTGATCCGAT 59.838 45.833 29.27 24.04 41.42 4.18
249 254 5.247084 CAAGGGATTGATCTGATCTGATCC 58.753 45.833 29.27 27.45 41.42 3.36
385 392 4.609691 ACACAAAGAAACGTCGACATTT 57.390 36.364 17.16 13.52 0.00 2.32
392 399 6.615839 GCAGTAGATGTACACAAAGAAACGTC 60.616 42.308 0.00 0.00 0.00 4.34
394 401 5.405571 AGCAGTAGATGTACACAAAGAAACG 59.594 40.000 0.00 0.00 0.00 3.60
397 404 6.090783 CGTAGCAGTAGATGTACACAAAGAA 58.909 40.000 0.00 0.00 0.00 2.52
401 408 5.645067 AGTACGTAGCAGTAGATGTACACAA 59.355 40.000 0.00 0.00 39.50 3.33
415 422 4.611310 CTAACAGTAGCAGTACGTAGCA 57.389 45.455 9.22 0.00 33.97 3.49
430 437 8.784043 AGTGAACCAAAATAAACTAGCTAACAG 58.216 33.333 0.00 0.00 0.00 3.16
431 438 8.685838 AGTGAACCAAAATAAACTAGCTAACA 57.314 30.769 0.00 0.00 0.00 2.41
432 439 9.394477 CAAGTGAACCAAAATAAACTAGCTAAC 57.606 33.333 0.00 0.00 0.00 2.34
433 440 9.127277 ACAAGTGAACCAAAATAAACTAGCTAA 57.873 29.630 0.00 0.00 0.00 3.09
434 441 8.564574 CACAAGTGAACCAAAATAAACTAGCTA 58.435 33.333 0.00 0.00 0.00 3.32
435 442 7.068226 ACACAAGTGAACCAAAATAAACTAGCT 59.932 33.333 7.28 0.00 0.00 3.32
436 443 7.200455 ACACAAGTGAACCAAAATAAACTAGC 58.800 34.615 7.28 0.00 0.00 3.42
437 444 9.659830 GTACACAAGTGAACCAAAATAAACTAG 57.340 33.333 7.28 0.00 0.00 2.57
438 445 9.175312 TGTACACAAGTGAACCAAAATAAACTA 57.825 29.630 7.28 0.00 0.00 2.24
439 446 8.057536 TGTACACAAGTGAACCAAAATAAACT 57.942 30.769 7.28 0.00 0.00 2.66
440 447 8.865590 ATGTACACAAGTGAACCAAAATAAAC 57.134 30.769 7.28 0.00 0.00 2.01
441 448 8.908903 AGATGTACACAAGTGAACCAAAATAAA 58.091 29.630 7.28 0.00 0.00 1.40
442 449 8.349245 CAGATGTACACAAGTGAACCAAAATAA 58.651 33.333 7.28 0.00 0.00 1.40
468 475 1.277557 TCTCAAAGAAGGCTCTGGCTC 59.722 52.381 0.00 0.00 37.50 4.70
494 501 2.288666 GTGCAAAGACAGAGTTGGTGA 58.711 47.619 0.00 0.00 0.00 4.02
577 584 1.461897 GGTTACATGTCCGTGTTTCCG 59.538 52.381 0.00 0.00 33.62 4.30
635 642 2.693267 ATCTTCCAAACCTAGGACGC 57.307 50.000 17.98 0.00 34.19 5.19
655 662 6.054941 TGCATATGTTTCATCTGGATTACGT 58.945 36.000 4.29 0.00 0.00 3.57
656 663 6.544038 TGCATATGTTTCATCTGGATTACG 57.456 37.500 4.29 0.00 0.00 3.18
798 811 1.670380 GGTGAGGAAGCAAGAGACGAC 60.670 57.143 0.00 0.00 0.00 4.34
847 860 4.202305 CCAACCTGGGCAAGAAACAAATAA 60.202 41.667 0.00 0.00 32.67 1.40
848 861 3.323403 CCAACCTGGGCAAGAAACAAATA 59.677 43.478 0.00 0.00 32.67 1.40
889 902 1.609501 TGACCAAGGGGGACTCTCG 60.610 63.158 0.00 0.00 41.15 4.04
912 925 3.552132 TGTACAAACAAGGTGCAGAGA 57.448 42.857 0.00 0.00 30.91 3.10
952 967 1.004277 GGAGCGATATGACGAAGCCG 61.004 60.000 0.00 0.00 42.50 5.52
953 968 0.032130 TGGAGCGATATGACGAAGCC 59.968 55.000 0.00 0.00 35.09 4.35
961 995 4.680171 TGAGTACGTATGGAGCGATATG 57.320 45.455 0.00 0.00 0.00 1.78
1004 1186 2.400399 CATGAGCACAAGCAAAACCTG 58.600 47.619 0.00 0.00 45.49 4.00
1089 1272 2.169832 TAGCAGTGGAGTTTGCAGAC 57.830 50.000 0.00 0.00 42.67 3.51
1100 1283 1.202510 GGTGCAGAGAGATAGCAGTGG 60.203 57.143 0.00 0.00 39.21 4.00
1138 1321 5.183140 TCATCGATGCATAAGACGATAGGAA 59.817 40.000 20.81 4.97 42.23 3.36
1158 1341 3.714391 GGTGAACCGTGGTAGTATCATC 58.286 50.000 0.00 0.00 0.00 2.92
1178 1361 2.610694 CGAATGGCAGGCATAGCGG 61.611 63.158 18.81 3.94 0.00 5.52
1179 1362 1.159713 TTCGAATGGCAGGCATAGCG 61.160 55.000 19.91 19.91 0.00 4.26
1187 1370 3.837213 ACAGTTTGATTCGAATGGCAG 57.163 42.857 16.96 3.08 0.00 4.85
1196 1379 8.457261 AGAAGCATATCAAGAACAGTTTGATTC 58.543 33.333 5.90 4.31 41.25 2.52
1266 1450 6.127793 ACCTACTCCGTGTAATTACTGATCT 58.872 40.000 16.33 2.89 0.00 2.75
1274 1458 6.537660 GCTGATAAAACCTACTCCGTGTAATT 59.462 38.462 0.00 0.00 0.00 1.40
1281 1465 3.857052 TGTGCTGATAAAACCTACTCCG 58.143 45.455 0.00 0.00 0.00 4.63
1284 1468 5.825679 TGTGTTTGTGCTGATAAAACCTACT 59.174 36.000 0.00 0.00 33.76 2.57
1285 1469 6.067263 TGTGTTTGTGCTGATAAAACCTAC 57.933 37.500 0.00 0.00 33.76 3.18
1286 1470 6.701145 TTGTGTTTGTGCTGATAAAACCTA 57.299 33.333 0.00 0.00 33.76 3.08
1308 1492 2.593436 CTCCGCCGTTGGGTGTTT 60.593 61.111 0.00 0.00 42.52 2.83
1311 1495 3.385749 ATAGCTCCGCCGTTGGGTG 62.386 63.158 0.00 0.00 43.74 4.61
1312 1496 3.081409 ATAGCTCCGCCGTTGGGT 61.081 61.111 0.00 0.00 34.97 4.51
1313 1497 2.023414 TACATAGCTCCGCCGTTGGG 62.023 60.000 0.00 0.00 0.00 4.12
1314 1498 0.597637 CTACATAGCTCCGCCGTTGG 60.598 60.000 0.00 0.00 0.00 3.77
1315 1499 1.215655 GCTACATAGCTCCGCCGTTG 61.216 60.000 3.56 0.00 45.62 4.10
1316 1500 1.067582 GCTACATAGCTCCGCCGTT 59.932 57.895 3.56 0.00 45.62 4.44
1317 1501 2.728817 GCTACATAGCTCCGCCGT 59.271 61.111 3.56 0.00 45.62 5.68
1323 1507 4.002068 CCCCCAGGATGCTACATAGCTC 62.002 59.091 11.98 7.03 42.39 4.09
1324 1508 2.112426 CCCCCAGGATGCTACATAGCT 61.112 57.143 11.98 0.00 42.39 3.32
1325 1509 0.326264 CCCCCAGGATGCTACATAGC 59.674 60.000 3.84 3.84 42.29 2.97
1354 1538 3.515104 ACAAGTTGCTTCAATATTGGGGG 59.485 43.478 15.36 7.13 31.66 5.40
1355 1539 4.220382 TCACAAGTTGCTTCAATATTGGGG 59.780 41.667 15.36 9.38 31.65 4.96
1356 1540 5.389859 TCACAAGTTGCTTCAATATTGGG 57.610 39.130 15.36 9.70 31.85 4.12
1357 1541 6.680810 TCTTCACAAGTTGCTTCAATATTGG 58.319 36.000 15.36 1.65 31.66 3.16
1358 1542 8.578308 TTTCTTCACAAGTTGCTTCAATATTG 57.422 30.769 9.29 9.29 32.78 1.90
1359 1543 9.768662 ATTTTCTTCACAAGTTGCTTCAATATT 57.231 25.926 1.81 0.00 0.00 1.28
1362 1546 9.768662 AATATTTTCTTCACAAGTTGCTTCAAT 57.231 25.926 1.81 0.00 0.00 2.57
1363 1547 9.033481 CAATATTTTCTTCACAAGTTGCTTCAA 57.967 29.630 1.81 0.00 0.00 2.69
1364 1548 7.169645 GCAATATTTTCTTCACAAGTTGCTTCA 59.830 33.333 1.81 0.00 37.16 3.02
1365 1549 7.383300 AGCAATATTTTCTTCACAAGTTGCTTC 59.617 33.333 1.81 0.00 45.02 3.86
1366 1550 7.170320 CAGCAATATTTTCTTCACAAGTTGCTT 59.830 33.333 1.81 0.00 45.02 3.91
1367 1551 6.752168 AGCAATATTTTCTTCACAAGTTGCT 58.248 32.000 1.81 0.00 43.25 3.91
1368 1552 6.421801 ACAGCAATATTTTCTTCACAAGTTGC 59.578 34.615 1.81 0.00 39.58 4.17
1369 1553 7.648908 TCACAGCAATATTTTCTTCACAAGTTG 59.351 33.333 0.00 0.00 0.00 3.16
1370 1554 7.715657 TCACAGCAATATTTTCTTCACAAGTT 58.284 30.769 0.00 0.00 0.00 2.66
1371 1555 7.275888 TCACAGCAATATTTTCTTCACAAGT 57.724 32.000 0.00 0.00 0.00 3.16
1372 1556 7.274904 CCATCACAGCAATATTTTCTTCACAAG 59.725 37.037 0.00 0.00 0.00 3.16
1373 1557 7.092079 CCATCACAGCAATATTTTCTTCACAA 58.908 34.615 0.00 0.00 0.00 3.33
1374 1558 6.209192 ACCATCACAGCAATATTTTCTTCACA 59.791 34.615 0.00 0.00 0.00 3.58
1375 1559 6.624423 ACCATCACAGCAATATTTTCTTCAC 58.376 36.000 0.00 0.00 0.00 3.18
1376 1560 6.839124 ACCATCACAGCAATATTTTCTTCA 57.161 33.333 0.00 0.00 0.00 3.02
1377 1561 9.294030 CTAAACCATCACAGCAATATTTTCTTC 57.706 33.333 0.00 0.00 0.00 2.87
1664 1848 3.331889 AGAATTCGCTGGGGGATATGAAT 59.668 43.478 0.00 0.00 0.00 2.57
1665 1849 2.711009 AGAATTCGCTGGGGGATATGAA 59.289 45.455 0.00 0.00 0.00 2.57
1666 1850 2.038952 CAGAATTCGCTGGGGGATATGA 59.961 50.000 0.00 0.00 32.26 2.15
1667 1851 2.224621 ACAGAATTCGCTGGGGGATATG 60.225 50.000 0.00 0.00 40.20 1.78
1668 1852 2.039084 GACAGAATTCGCTGGGGGATAT 59.961 50.000 0.00 0.00 40.20 1.63
1669 1853 1.416401 GACAGAATTCGCTGGGGGATA 59.584 52.381 0.00 0.00 40.20 2.59
1670 1854 0.181350 GACAGAATTCGCTGGGGGAT 59.819 55.000 0.00 0.00 40.20 3.85
1671 1855 0.909610 AGACAGAATTCGCTGGGGGA 60.910 55.000 0.00 0.00 40.20 4.81
1672 1856 0.830648 TAGACAGAATTCGCTGGGGG 59.169 55.000 0.00 0.00 40.20 5.40
1673 1857 1.808133 GCTAGACAGAATTCGCTGGGG 60.808 57.143 0.00 0.00 40.20 4.96
1674 1858 1.137872 AGCTAGACAGAATTCGCTGGG 59.862 52.381 0.00 0.00 40.20 4.45
1675 1859 2.468831 GAGCTAGACAGAATTCGCTGG 58.531 52.381 7.83 6.53 40.20 4.85
1676 1860 2.468831 GGAGCTAGACAGAATTCGCTG 58.531 52.381 7.83 1.02 41.63 5.18
1677 1861 1.066303 CGGAGCTAGACAGAATTCGCT 59.934 52.381 0.00 1.21 0.00 4.93
1678 1862 1.482278 CGGAGCTAGACAGAATTCGC 58.518 55.000 0.00 0.00 0.00 4.70
1693 1877 2.639286 GTGTTTGCAGTGGCGGAG 59.361 61.111 0.00 0.00 45.35 4.63
1694 1878 2.904866 GGTGTTTGCAGTGGCGGA 60.905 61.111 0.00 0.00 45.35 5.54
1695 1879 3.977244 GGGTGTTTGCAGTGGCGG 61.977 66.667 0.00 0.00 45.35 6.13
1696 1880 2.906897 AGGGTGTTTGCAGTGGCG 60.907 61.111 0.00 0.00 45.35 5.69
1697 1881 2.730094 CAGGGTGTTTGCAGTGGC 59.270 61.111 0.00 0.00 41.68 5.01
1698 1882 1.829533 AGCAGGGTGTTTGCAGTGG 60.830 57.895 0.00 0.00 43.92 4.00
1699 1883 1.102809 TCAGCAGGGTGTTTGCAGTG 61.103 55.000 0.00 0.00 43.92 3.66
1700 1884 0.178981 ATCAGCAGGGTGTTTGCAGT 60.179 50.000 0.00 0.00 43.92 4.40
1701 1885 0.524862 GATCAGCAGGGTGTTTGCAG 59.475 55.000 0.00 0.00 43.92 4.41
1702 1886 0.895100 GGATCAGCAGGGTGTTTGCA 60.895 55.000 0.00 0.00 43.92 4.08
1703 1887 0.610232 AGGATCAGCAGGGTGTTTGC 60.610 55.000 0.00 0.00 41.83 3.68
1704 1888 2.787473 TAGGATCAGCAGGGTGTTTG 57.213 50.000 0.00 0.00 0.00 2.93
1705 1889 3.525199 AGAATAGGATCAGCAGGGTGTTT 59.475 43.478 0.00 0.00 0.00 2.83
1706 1890 3.118531 AGAATAGGATCAGCAGGGTGTT 58.881 45.455 0.00 0.00 0.00 3.32
1707 1891 2.703007 GAGAATAGGATCAGCAGGGTGT 59.297 50.000 0.00 0.00 0.00 4.16
1708 1892 2.702478 TGAGAATAGGATCAGCAGGGTG 59.298 50.000 0.00 0.00 0.00 4.61
1709 1893 2.703007 GTGAGAATAGGATCAGCAGGGT 59.297 50.000 0.00 0.00 0.00 4.34
1710 1894 2.702478 TGTGAGAATAGGATCAGCAGGG 59.298 50.000 0.00 0.00 0.00 4.45
1717 1901 3.501445 GCATGGCTTGTGAGAATAGGATC 59.499 47.826 2.12 0.00 0.00 3.36
1734 1918 4.460948 AAAATCACCTAAAGCTGCATGG 57.539 40.909 1.02 0.47 0.00 3.66
1756 1940 3.202829 TGTAAACTTGAAACCGGAGCT 57.797 42.857 9.46 0.00 0.00 4.09
1758 1942 3.314080 TGCTTGTAAACTTGAAACCGGAG 59.686 43.478 9.46 0.00 0.00 4.63
1794 1979 4.191544 ACTACATAATCTGTGTTGCGCAT 58.808 39.130 12.75 0.00 38.92 4.73
2004 2190 4.386867 TTCGGTGACTCTGATGTAATCC 57.613 45.455 0.00 0.00 44.73 3.01
2040 2226 0.815734 AGCTGAGCAAACCATGATGC 59.184 50.000 7.39 9.28 42.87 3.91
2184 2370 0.398696 TGTTTTCAGAGGCCGGCTAA 59.601 50.000 28.56 10.34 0.00 3.09
2206 2429 3.005684 CCATTTTTACTTGTCCTGCTGCA 59.994 43.478 0.88 0.88 0.00 4.41
2220 2443 3.190327 CGTCACTCATGTGCCCATTTTTA 59.810 43.478 0.00 0.00 43.49 1.52
2225 2448 0.543277 ATCGTCACTCATGTGCCCAT 59.457 50.000 0.00 0.00 43.49 4.00
2226 2449 0.391528 CATCGTCACTCATGTGCCCA 60.392 55.000 0.00 0.00 43.49 5.36
2228 2451 1.709147 GGCATCGTCACTCATGTGCC 61.709 60.000 4.20 4.20 44.37 5.01
2229 2452 1.717937 GGCATCGTCACTCATGTGC 59.282 57.895 0.00 0.00 43.49 4.57
2230 2453 2.001357 CGGCATCGTCACTCATGTG 58.999 57.895 0.00 0.00 45.07 3.21
2231 2454 4.502263 CGGCATCGTCACTCATGT 57.498 55.556 0.00 0.00 0.00 3.21
2324 2853 2.715815 CGCATTTCTCATCGTTATCGCG 60.716 50.000 0.00 0.00 36.96 5.87
2335 2864 2.032634 GCACCCGTCGCATTTCTCA 61.033 57.895 0.00 0.00 0.00 3.27
2349 2878 0.392193 CCTGACAGTCATCCAGCACC 60.392 60.000 2.97 0.00 0.00 5.01
2382 2921 4.023980 CACCTACTAGTCATCAGGGACAA 58.976 47.826 12.96 0.00 40.29 3.18
2396 2939 6.724441 TCCAATCTTCAGTTCTTCACCTACTA 59.276 38.462 0.00 0.00 0.00 1.82
2455 3722 0.736325 CCGCGACCGATTTCTGACTT 60.736 55.000 8.23 0.00 36.29 3.01
2493 3760 8.793592 GTTTTTACTGAGATACAATGTCCCTTT 58.206 33.333 0.00 0.00 0.00 3.11
2495 3762 7.390718 GTGTTTTTACTGAGATACAATGTCCCT 59.609 37.037 0.00 0.00 0.00 4.20
2496 3763 7.361799 GGTGTTTTTACTGAGATACAATGTCCC 60.362 40.741 0.00 0.00 0.00 4.46
2497 3764 7.174253 TGGTGTTTTTACTGAGATACAATGTCC 59.826 37.037 0.00 0.00 0.00 4.02
2498 3765 8.094798 TGGTGTTTTTACTGAGATACAATGTC 57.905 34.615 0.00 0.00 0.00 3.06
2499 3766 7.174946 CCTGGTGTTTTTACTGAGATACAATGT 59.825 37.037 0.00 0.00 0.00 2.71
2500 3767 7.362056 CCCTGGTGTTTTTACTGAGATACAATG 60.362 40.741 0.00 0.00 0.00 2.82
2501 3768 6.659242 CCCTGGTGTTTTTACTGAGATACAAT 59.341 38.462 0.00 0.00 0.00 2.71
2504 3771 5.557866 ACCCTGGTGTTTTTACTGAGATAC 58.442 41.667 0.00 0.00 0.00 2.24
2561 3996 8.303156 TGAGTTTTCATCAAAGACTCAACAAAA 58.697 29.630 8.25 0.00 37.07 2.44
2604 4039 6.176975 TGAAATTATTAACAGGCACAGTCG 57.823 37.500 0.00 0.00 0.00 4.18
2609 4044 6.027749 CGTTCCTGAAATTATTAACAGGCAC 58.972 40.000 19.02 17.78 46.36 5.01
2640 4075 1.078426 CCCACGTAGCCCTTCTTGG 60.078 63.158 0.00 0.00 0.00 3.61
3107 4542 2.227865 TGGCTTGAAACCTATGAAACGC 59.772 45.455 0.00 0.00 0.00 4.84
3121 4556 3.740397 GCTGCATGCGTGGCTTGA 61.740 61.111 14.09 0.00 36.06 3.02
3131 4566 2.824041 GTGTACGGGGGCTGCATG 60.824 66.667 0.50 0.00 0.00 4.06
3156 4591 8.691797 TCAAACTAAAGCAAAAAGGAGTATTGT 58.308 29.630 0.00 0.00 0.00 2.71
3295 4733 3.884895 TGAATCGGCTAACCACATCATT 58.115 40.909 0.00 0.00 34.57 2.57
3329 4767 2.671619 GGCCACTTGTTGCGCCTA 60.672 61.111 4.18 0.00 38.12 3.93
3441 4879 5.163854 CGCTTATTAAGAGTGTGGAAGGTTG 60.164 44.000 7.63 0.00 0.00 3.77
3580 5018 5.592282 TGTTTCTCTGTGGCATAAAGTTCAA 59.408 36.000 0.00 0.00 0.00 2.69
3653 5091 0.601558 GCTATTCGCGAGGGTGGATA 59.398 55.000 9.59 2.07 0.00 2.59
3958 5396 3.403277 CGAATCTGCGCTCCCAAG 58.597 61.111 9.73 0.00 0.00 3.61
4027 5465 9.760077 ATCGACAAACTAAGAAGAAACTTTCTA 57.240 29.630 4.41 0.00 39.61 2.10
4100 5540 3.940852 CGATCACCAAGAAATCCATGTGA 59.059 43.478 0.00 0.00 37.17 3.58
4101 5541 3.940852 TCGATCACCAAGAAATCCATGTG 59.059 43.478 0.00 0.00 0.00 3.21
4102 5542 3.941483 GTCGATCACCAAGAAATCCATGT 59.059 43.478 0.00 0.00 0.00 3.21
4103 5543 3.313526 GGTCGATCACCAAGAAATCCATG 59.686 47.826 8.84 0.00 45.98 3.66
4104 5544 3.545703 GGTCGATCACCAAGAAATCCAT 58.454 45.455 8.84 0.00 45.98 3.41
4105 5545 2.985896 GGTCGATCACCAAGAAATCCA 58.014 47.619 8.84 0.00 45.98 3.41
4124 5564 4.424566 GCATGCACTTGCCACCGG 62.425 66.667 14.21 0.00 41.18 5.28
4143 5587 5.647658 AGATGAATTAAGAAATCCACGTGCA 59.352 36.000 10.91 0.00 0.00 4.57
4144 5588 6.124088 AGATGAATTAAGAAATCCACGTGC 57.876 37.500 10.91 0.00 0.00 5.34
4145 5589 6.414079 CGAGATGAATTAAGAAATCCACGTG 58.586 40.000 9.08 9.08 0.00 4.49
4146 5590 5.006746 GCGAGATGAATTAAGAAATCCACGT 59.993 40.000 0.00 0.00 0.00 4.49
4147 5591 5.435557 GCGAGATGAATTAAGAAATCCACG 58.564 41.667 0.00 0.00 0.00 4.94
4148 5592 5.529060 AGGCGAGATGAATTAAGAAATCCAC 59.471 40.000 0.00 0.00 0.00 4.02
4306 5750 2.187946 CGCAGTCCACCATCTCCC 59.812 66.667 0.00 0.00 0.00 4.30
4324 5768 0.460284 CGAAGTTCAGGATCCCCACG 60.460 60.000 8.55 1.57 33.88 4.94
4348 5792 2.549563 CCTCCATTGGTCCATCTCATCG 60.550 54.545 1.86 0.00 0.00 3.84
4438 5882 1.783031 CGTCGATCCACTCCGGGTAG 61.783 65.000 0.00 0.00 34.36 3.18
4705 6149 0.036010 CCTCGTCCTTGCACCTGAAT 60.036 55.000 0.00 0.00 0.00 2.57
4711 6155 1.639298 GCATGACCTCGTCCTTGCAC 61.639 60.000 0.00 0.00 39.13 4.57
4846 6290 1.922135 GACATGTGTTGGCGCGGATT 61.922 55.000 8.83 0.00 0.00 3.01
4874 6318 1.473080 GGCATGCAACACCAACTTGTT 60.473 47.619 21.36 0.00 40.46 2.83
4879 6323 0.317799 TCATGGCATGCAACACCAAC 59.682 50.000 22.56 0.00 36.94 3.77
4913 6564 0.530744 CTCCCCTGTTCGACGATCAA 59.469 55.000 9.70 0.00 0.00 2.57
5214 6868 3.058160 ACCCGGTCGTACTCGGTG 61.058 66.667 14.82 10.27 44.32 4.94
5823 7480 3.869272 GCGCAGATGGTCTTGCGG 61.869 66.667 18.69 3.15 41.12 5.69
6007 7664 5.824243 AAACTTTGAACGTCTCATCTACG 57.176 39.130 0.00 0.00 45.64 3.51
6058 7715 2.810852 CTCCTGCCTTTCAAGTCAAGTC 59.189 50.000 0.00 0.00 0.00 3.01
6138 7981 9.277783 CGATGATGGATTAGAGGAAGTAATTTT 57.722 33.333 0.00 0.00 0.00 1.82
6139 7982 8.651389 TCGATGATGGATTAGAGGAAGTAATTT 58.349 33.333 0.00 0.00 0.00 1.82
6140 7983 8.195165 TCGATGATGGATTAGAGGAAGTAATT 57.805 34.615 0.00 0.00 0.00 1.40
6141 7984 7.453126 ACTCGATGATGGATTAGAGGAAGTAAT 59.547 37.037 0.00 0.00 0.00 1.89
6142 7985 6.778069 ACTCGATGATGGATTAGAGGAAGTAA 59.222 38.462 0.00 0.00 0.00 2.24
6143 7986 6.207614 CACTCGATGATGGATTAGAGGAAGTA 59.792 42.308 0.00 0.00 0.00 2.24
6144 7987 5.010516 CACTCGATGATGGATTAGAGGAAGT 59.989 44.000 0.00 0.00 0.00 3.01
6145 7988 5.010516 ACACTCGATGATGGATTAGAGGAAG 59.989 44.000 0.00 0.00 0.00 3.46
6146 7989 4.895889 ACACTCGATGATGGATTAGAGGAA 59.104 41.667 0.00 0.00 0.00 3.36
6147 7990 4.474394 ACACTCGATGATGGATTAGAGGA 58.526 43.478 0.00 0.00 0.00 3.71
6148 7991 4.862902 ACACTCGATGATGGATTAGAGG 57.137 45.455 0.00 0.00 0.00 3.69
6149 7992 7.208225 TCTAACACTCGATGATGGATTAGAG 57.792 40.000 0.00 0.00 0.00 2.43
6150 7993 7.767250 ATCTAACACTCGATGATGGATTAGA 57.233 36.000 2.83 2.83 28.40 2.10
6151 7994 8.515414 TGTATCTAACACTCGATGATGGATTAG 58.485 37.037 8.36 3.90 33.95 1.73
6152 7995 8.404107 TGTATCTAACACTCGATGATGGATTA 57.596 34.615 8.36 0.48 33.95 1.75
6153 7996 7.290110 TGTATCTAACACTCGATGATGGATT 57.710 36.000 8.36 0.00 33.95 3.01
6154 7997 6.901081 TGTATCTAACACTCGATGATGGAT 57.099 37.500 0.00 0.00 35.76 3.41
6155 7998 6.071896 GGATGTATCTAACACTCGATGATGGA 60.072 42.308 0.00 0.00 42.09 3.41
6156 7999 6.096036 GGATGTATCTAACACTCGATGATGG 58.904 44.000 0.00 0.00 42.09 3.51
6157 8000 6.681777 TGGATGTATCTAACACTCGATGATG 58.318 40.000 0.00 0.00 42.09 3.07
6158 8001 6.901081 TGGATGTATCTAACACTCGATGAT 57.099 37.500 0.00 0.00 42.09 2.45
6159 8002 6.901081 ATGGATGTATCTAACACTCGATGA 57.099 37.500 0.00 0.00 42.09 2.92
6160 8003 8.681806 AGATATGGATGTATCTAACACTCGATG 58.318 37.037 0.00 0.00 42.09 3.84
6161 8004 8.815565 AGATATGGATGTATCTAACACTCGAT 57.184 34.615 0.00 0.00 42.09 3.59
6162 8005 9.384764 CTAGATATGGATGTATCTAACACTCGA 57.615 37.037 5.46 0.00 41.00 4.04
6163 8006 9.384764 TCTAGATATGGATGTATCTAACACTCG 57.615 37.037 0.00 0.00 41.00 4.18
6175 8018 9.553064 GTCTTGAATTTGTCTAGATATGGATGT 57.447 33.333 0.00 0.00 39.77 3.06
6176 8019 9.551734 TGTCTTGAATTTGTCTAGATATGGATG 57.448 33.333 0.00 0.00 39.77 3.51
6177 8020 9.775854 CTGTCTTGAATTTGTCTAGATATGGAT 57.224 33.333 0.00 0.00 39.77 3.41
6178 8021 8.981659 TCTGTCTTGAATTTGTCTAGATATGGA 58.018 33.333 0.00 0.00 39.77 3.41
6179 8022 9.775854 ATCTGTCTTGAATTTGTCTAGATATGG 57.224 33.333 0.00 0.00 39.77 2.74
6191 8034 9.793252 CCGATTCAAATTATCTGTCTTGAATTT 57.207 29.630 9.53 0.00 44.49 1.82
6192 8035 8.408601 CCCGATTCAAATTATCTGTCTTGAATT 58.591 33.333 9.53 0.00 44.49 2.17
6193 8036 7.013655 CCCCGATTCAAATTATCTGTCTTGAAT 59.986 37.037 8.25 8.25 46.17 2.57
6194 8037 6.318648 CCCCGATTCAAATTATCTGTCTTGAA 59.681 38.462 0.00 0.00 40.85 2.69
6195 8038 5.822519 CCCCGATTCAAATTATCTGTCTTGA 59.177 40.000 0.00 0.00 0.00 3.02
6196 8039 5.009010 CCCCCGATTCAAATTATCTGTCTTG 59.991 44.000 0.00 0.00 0.00 3.02
6197 8040 5.133221 CCCCCGATTCAAATTATCTGTCTT 58.867 41.667 0.00 0.00 0.00 3.01
6198 8041 4.718961 CCCCCGATTCAAATTATCTGTCT 58.281 43.478 0.00 0.00 0.00 3.41
6217 8060 1.231963 ATCCCTTGGATGTAACCCCC 58.768 55.000 0.00 0.00 41.43 5.40
6218 8061 3.203487 TGTAATCCCTTGGATGTAACCCC 59.797 47.826 0.00 0.00 42.27 4.95
6219 8062 4.513406 TGTAATCCCTTGGATGTAACCC 57.487 45.455 0.00 0.00 42.27 4.11
6231 8074 7.286775 GAGTGTTTCTCTAGAGATGTAATCCCT 59.713 40.741 22.93 10.98 41.17 4.20
6232 8075 7.430441 GAGTGTTTCTCTAGAGATGTAATCCC 58.570 42.308 22.93 7.05 41.17 3.85
6233 8076 7.136119 CGAGTGTTTCTCTAGAGATGTAATCC 58.864 42.308 22.93 9.15 41.75 3.01
6234 8077 6.635239 GCGAGTGTTTCTCTAGAGATGTAATC 59.365 42.308 22.93 17.19 41.41 1.75
6235 8078 6.500041 GCGAGTGTTTCTCTAGAGATGTAAT 58.500 40.000 22.93 11.09 40.75 1.89
6236 8079 5.447413 CGCGAGTGTTTCTCTAGAGATGTAA 60.447 44.000 22.93 11.86 40.75 2.41
6237 8080 4.034163 CGCGAGTGTTTCTCTAGAGATGTA 59.966 45.833 22.93 5.89 40.75 2.29
6238 8081 3.181505 CGCGAGTGTTTCTCTAGAGATGT 60.182 47.826 22.93 6.43 40.75 3.06
6239 8082 3.181505 ACGCGAGTGTTTCTCTAGAGATG 60.182 47.826 22.93 8.43 46.97 2.90
6240 8083 3.011119 ACGCGAGTGTTTCTCTAGAGAT 58.989 45.455 22.93 7.91 46.97 2.75
6241 8084 2.424557 ACGCGAGTGTTTCTCTAGAGA 58.575 47.619 18.76 18.76 46.97 3.10
6242 8085 2.904011 ACGCGAGTGTTTCTCTAGAG 57.096 50.000 15.93 13.98 46.97 2.43
6256 8099 4.819761 GCCCATGAGAGCACGCGA 62.820 66.667 15.93 0.00 0.00 5.87
6259 8102 2.513204 CTGGCCCATGAGAGCACG 60.513 66.667 0.00 0.00 0.00 5.34
6327 8170 4.521062 GTCATGCGCTCGAGCCCT 62.521 66.667 30.66 13.21 37.91 5.19
6350 8193 5.220154 CGTCGTCGCTTAGTTTAATCACAAT 60.220 40.000 0.00 0.00 0.00 2.71
6688 8538 9.859427 TCAAATTCACCATCATTCTTTGAATAC 57.141 29.630 0.00 0.00 36.18 1.89
6892 8745 8.408043 TCAACATTTTATTGGAACTCATGACT 57.592 30.769 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.