Multiple sequence alignment - TraesCS5A01G064600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G064600 chr5A 100.000 3190 0 0 1 3190 69998374 70001563 0.000000e+00 5891.0
1 TraesCS5A01G064600 chr5A 81.115 879 142 11 1013 1889 14289168 14288312 0.000000e+00 682.0
2 TraesCS5A01G064600 chr5A 79.715 281 50 6 2002 2280 14272789 14272514 2.510000e-46 196.0
3 TraesCS5A01G064600 chr5A 93.684 95 6 0 1870 1964 14272888 14272794 3.320000e-30 143.0
4 TraesCS5A01G064600 chr5B 92.170 2516 136 39 540 3018 77671335 77668844 0.000000e+00 3498.0
5 TraesCS5A01G064600 chr5B 93.000 100 7 0 3086 3185 77668865 77668766 2.560000e-31 147.0
6 TraesCS5A01G064600 chr5D 91.235 1449 80 14 1745 3190 74736245 74737649 0.000000e+00 1929.0
7 TraesCS5A01G064600 chr5D 96.885 899 27 1 822 1720 74734676 74735573 0.000000e+00 1504.0
8 TraesCS5A01G064600 chr5D 95.819 287 9 1 540 823 74734362 74734648 8.060000e-126 460.0
9 TraesCS5A01G064600 chr5D 89.106 358 35 2 1 358 389368537 389368184 2.920000e-120 442.0
10 TraesCS5A01G064600 chr5D 73.312 948 216 32 1187 2120 560008608 560007684 6.640000e-82 315.0
11 TraesCS5A01G064600 chr3A 77.099 1048 197 26 1095 2118 717901172 717902200 1.660000e-157 566.0
12 TraesCS5A01G064600 chr3A 74.078 976 213 35 1178 2142 10687328 10686382 6.500000e-97 364.0
13 TraesCS5A01G064600 chr4A 91.341 358 26 2 1 358 55961909 55962261 4.780000e-133 484.0
14 TraesCS5A01G064600 chr4A 77.643 577 120 8 1147 1720 604209588 604209018 3.050000e-90 342.0
15 TraesCS5A01G064600 chr4A 81.061 132 19 4 412 539 724870626 724870497 2.020000e-17 100.0
16 TraesCS5A01G064600 chr2D 90.476 357 27 4 1 356 619964808 619964458 6.230000e-127 464.0
17 TraesCS5A01G064600 chr2D 90.341 352 29 3 7 358 82229431 82229085 1.040000e-124 457.0
18 TraesCS5A01G064600 chr2D 94.595 37 2 0 511 547 375580049 375580013 1.240000e-04 58.4
19 TraesCS5A01G064600 chr1D 89.851 335 30 2 24 358 437476023 437475693 8.180000e-116 427.0
20 TraesCS5A01G064600 chr2B 88.187 364 34 7 1 362 638015219 638014863 2.940000e-115 425.0
21 TraesCS5A01G064600 chr7D 87.912 364 37 4 1 363 550213008 550213365 3.800000e-114 422.0
22 TraesCS5A01G064600 chr2A 87.989 358 37 3 1 358 559689829 559690180 4.920000e-113 418.0
23 TraesCS5A01G064600 chr6D 87.744 359 38 4 1 358 191801182 191800829 6.370000e-112 414.0
24 TraesCS5A01G064600 chrUn 78.364 550 108 11 1178 1723 257885854 257885312 2.360000e-91 346.0
25 TraesCS5A01G064600 chrUn 73.841 906 194 36 1175 2067 35296509 35297384 1.430000e-83 320.0
26 TraesCS5A01G064600 chrUn 73.841 906 194 36 1175 2067 229346349 229347224 1.430000e-83 320.0
27 TraesCS5A01G064600 chr3B 73.517 978 216 36 1175 2139 13816477 13817424 6.600000e-87 331.0
28 TraesCS5A01G064600 chr4D 93.750 176 10 1 367 541 1815218 1815043 2.440000e-66 263.0
29 TraesCS5A01G064600 chr6A 100.000 28 0 0 2892 2919 137879182 137879209 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G064600 chr5A 69998374 70001563 3189 False 5891.000000 5891 100.000000 1 3190 1 chr5A.!!$F1 3189
1 TraesCS5A01G064600 chr5A 14288312 14289168 856 True 682.000000 682 81.115000 1013 1889 1 chr5A.!!$R1 876
2 TraesCS5A01G064600 chr5B 77668766 77671335 2569 True 1822.500000 3498 92.585000 540 3185 2 chr5B.!!$R1 2645
3 TraesCS5A01G064600 chr5D 74734362 74737649 3287 False 1297.666667 1929 94.646333 540 3190 3 chr5D.!!$F1 2650
4 TraesCS5A01G064600 chr5D 560007684 560008608 924 True 315.000000 315 73.312000 1187 2120 1 chr5D.!!$R2 933
5 TraesCS5A01G064600 chr3A 717901172 717902200 1028 False 566.000000 566 77.099000 1095 2118 1 chr3A.!!$F1 1023
6 TraesCS5A01G064600 chr3A 10686382 10687328 946 True 364.000000 364 74.078000 1178 2142 1 chr3A.!!$R1 964
7 TraesCS5A01G064600 chr4A 604209018 604209588 570 True 342.000000 342 77.643000 1147 1720 1 chr4A.!!$R1 573
8 TraesCS5A01G064600 chrUn 257885312 257885854 542 True 346.000000 346 78.364000 1178 1723 1 chrUn.!!$R1 545
9 TraesCS5A01G064600 chrUn 35296509 35297384 875 False 320.000000 320 73.841000 1175 2067 1 chrUn.!!$F1 892
10 TraesCS5A01G064600 chrUn 229346349 229347224 875 False 320.000000 320 73.841000 1175 2067 1 chrUn.!!$F2 892
11 TraesCS5A01G064600 chr3B 13816477 13817424 947 False 331.000000 331 73.517000 1175 2139 1 chr3B.!!$F1 964

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
103 104 0.034059 CCGATGGGAGATGGTAGCAC 59.966 60.0 0.0 0.0 34.06 4.40 F
107 108 0.042581 TGGGAGATGGTAGCACAGGA 59.957 55.0 0.0 0.0 0.00 3.86 F
471 472 0.171903 TTTAGGAGGCTACGACGCAC 59.828 55.0 0.0 0.0 0.00 5.34 F
476 477 0.179134 GAGGCTACGACGCACTCATT 60.179 55.0 0.0 0.0 31.65 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1391 1426 5.104360 ACCAGTGCTATGAAGTCCATGTTAT 60.104 40.000 0.00 0.0 36.71 1.89 R
1791 2492 5.266733 ACACAAGCAAAAGATGAACACAT 57.733 34.783 0.00 0.0 0.00 3.21 R
2162 2878 2.070262 TTGCACTCTGTGATGTCTCG 57.930 50.000 1.52 0.0 35.23 4.04 R
2369 3088 2.406024 TCGCGTACATTTCGAACACTTC 59.594 45.455 5.77 0.0 0.00 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.736144 TATTTTCCGAGTCACTGCGT 57.264 45.000 0.00 0.00 0.00 5.24
20 21 1.878953 ATTTTCCGAGTCACTGCGTT 58.121 45.000 0.00 0.00 0.00 4.84
21 22 0.934496 TTTTCCGAGTCACTGCGTTG 59.066 50.000 0.00 0.00 0.00 4.10
22 23 0.103390 TTTCCGAGTCACTGCGTTGA 59.897 50.000 0.00 0.00 0.00 3.18
23 24 0.317160 TTCCGAGTCACTGCGTTGAT 59.683 50.000 0.00 0.00 0.00 2.57
24 25 0.109272 TCCGAGTCACTGCGTTGATC 60.109 55.000 0.00 0.00 0.00 2.92
25 26 1.078759 CCGAGTCACTGCGTTGATCC 61.079 60.000 0.00 0.00 0.00 3.36
26 27 1.406219 CGAGTCACTGCGTTGATCCG 61.406 60.000 0.00 0.00 0.00 4.18
27 28 0.388649 GAGTCACTGCGTTGATCCGT 60.389 55.000 0.00 0.00 0.00 4.69
28 29 0.885879 AGTCACTGCGTTGATCCGTA 59.114 50.000 0.00 0.00 0.00 4.02
29 30 1.476891 AGTCACTGCGTTGATCCGTAT 59.523 47.619 0.00 0.00 0.00 3.06
30 31 1.588404 GTCACTGCGTTGATCCGTATG 59.412 52.381 0.00 0.00 0.00 2.39
31 32 1.203758 TCACTGCGTTGATCCGTATGT 59.796 47.619 0.00 0.00 0.00 2.29
32 33 1.324435 CACTGCGTTGATCCGTATGTG 59.676 52.381 0.00 0.00 0.00 3.21
33 34 0.930310 CTGCGTTGATCCGTATGTGG 59.070 55.000 0.00 0.00 0.00 4.17
34 35 0.248012 TGCGTTGATCCGTATGTGGT 59.752 50.000 0.00 0.00 0.00 4.16
35 36 0.928229 GCGTTGATCCGTATGTGGTC 59.072 55.000 0.00 0.00 0.00 4.02
36 37 1.197055 CGTTGATCCGTATGTGGTCG 58.803 55.000 0.00 0.00 0.00 4.79
37 38 0.928229 GTTGATCCGTATGTGGTCGC 59.072 55.000 0.00 0.00 0.00 5.19
38 39 0.821517 TTGATCCGTATGTGGTCGCT 59.178 50.000 0.00 0.00 0.00 4.93
39 40 1.682740 TGATCCGTATGTGGTCGCTA 58.317 50.000 0.00 0.00 0.00 4.26
40 41 1.335810 TGATCCGTATGTGGTCGCTAC 59.664 52.381 0.00 0.00 0.00 3.58
41 42 1.607628 GATCCGTATGTGGTCGCTACT 59.392 52.381 0.00 0.00 0.00 2.57
42 43 1.019673 TCCGTATGTGGTCGCTACTC 58.980 55.000 0.00 0.00 0.00 2.59
43 44 0.736636 CCGTATGTGGTCGCTACTCA 59.263 55.000 0.00 0.00 0.00 3.41
44 45 1.533338 CCGTATGTGGTCGCTACTCAC 60.533 57.143 3.91 3.91 0.00 3.51
45 46 1.400846 CGTATGTGGTCGCTACTCACT 59.599 52.381 10.01 1.88 31.73 3.41
46 47 2.539142 CGTATGTGGTCGCTACTCACTC 60.539 54.545 10.01 3.07 31.73 3.51
47 48 0.818296 ATGTGGTCGCTACTCACTCC 59.182 55.000 10.01 0.00 31.73 3.85
48 49 1.136984 GTGGTCGCTACTCACTCCG 59.863 63.158 3.71 0.00 0.00 4.63
49 50 1.002990 TGGTCGCTACTCACTCCGA 60.003 57.895 0.00 0.00 0.00 4.55
50 51 1.303799 TGGTCGCTACTCACTCCGAC 61.304 60.000 3.68 3.68 46.60 4.79
51 52 1.060622 GTCGCTACTCACTCCGACG 59.939 63.158 0.00 0.00 40.27 5.12
52 53 1.079612 TCGCTACTCACTCCGACGA 60.080 57.895 0.00 0.00 0.00 4.20
53 54 0.671472 TCGCTACTCACTCCGACGAA 60.671 55.000 0.00 0.00 0.00 3.85
54 55 0.247735 CGCTACTCACTCCGACGAAG 60.248 60.000 0.00 0.00 0.00 3.79
55 56 0.099082 GCTACTCACTCCGACGAAGG 59.901 60.000 0.00 0.00 0.00 3.46
56 57 1.451067 CTACTCACTCCGACGAAGGT 58.549 55.000 0.00 0.00 0.00 3.50
57 58 1.397692 CTACTCACTCCGACGAAGGTC 59.602 57.143 0.00 0.00 39.89 3.85
58 59 0.536687 ACTCACTCCGACGAAGGTCA 60.537 55.000 0.00 0.00 43.61 4.02
59 60 0.169230 CTCACTCCGACGAAGGTCAG 59.831 60.000 0.00 0.00 43.61 3.51
60 61 1.213013 CACTCCGACGAAGGTCAGG 59.787 63.158 0.00 0.00 43.61 3.86
61 62 1.977544 ACTCCGACGAAGGTCAGGG 60.978 63.158 0.00 0.00 43.61 4.45
62 63 1.677966 CTCCGACGAAGGTCAGGGA 60.678 63.158 0.00 0.00 43.61 4.20
63 64 1.658686 CTCCGACGAAGGTCAGGGAG 61.659 65.000 0.00 4.52 43.61 4.30
64 65 1.977544 CCGACGAAGGTCAGGGAGT 60.978 63.158 0.00 0.00 43.61 3.85
65 66 1.213013 CGACGAAGGTCAGGGAGTG 59.787 63.158 0.00 0.00 43.61 3.51
66 67 1.524863 CGACGAAGGTCAGGGAGTGT 61.525 60.000 0.00 0.00 43.61 3.55
67 68 0.680061 GACGAAGGTCAGGGAGTGTT 59.320 55.000 0.00 0.00 42.91 3.32
68 69 1.070289 GACGAAGGTCAGGGAGTGTTT 59.930 52.381 0.00 0.00 42.91 2.83
69 70 1.202651 ACGAAGGTCAGGGAGTGTTTG 60.203 52.381 0.00 0.00 0.00 2.93
70 71 1.878102 CGAAGGTCAGGGAGTGTTTGG 60.878 57.143 0.00 0.00 0.00 3.28
71 72 1.143073 GAAGGTCAGGGAGTGTTTGGT 59.857 52.381 0.00 0.00 0.00 3.67
72 73 1.222567 AGGTCAGGGAGTGTTTGGTT 58.777 50.000 0.00 0.00 0.00 3.67
73 74 2.414612 AGGTCAGGGAGTGTTTGGTTA 58.585 47.619 0.00 0.00 0.00 2.85
74 75 2.105993 AGGTCAGGGAGTGTTTGGTTAC 59.894 50.000 0.00 0.00 0.00 2.50
75 76 2.105993 GGTCAGGGAGTGTTTGGTTACT 59.894 50.000 0.00 0.00 0.00 2.24
76 77 3.139077 GTCAGGGAGTGTTTGGTTACTG 58.861 50.000 0.00 0.00 0.00 2.74
77 78 3.042682 TCAGGGAGTGTTTGGTTACTGA 58.957 45.455 0.00 0.00 0.00 3.41
78 79 3.456644 TCAGGGAGTGTTTGGTTACTGAA 59.543 43.478 0.00 0.00 31.51 3.02
79 80 4.104102 TCAGGGAGTGTTTGGTTACTGAAT 59.896 41.667 0.00 0.00 31.51 2.57
80 81 4.455877 CAGGGAGTGTTTGGTTACTGAATC 59.544 45.833 0.00 0.00 0.00 2.52
81 82 4.351111 AGGGAGTGTTTGGTTACTGAATCT 59.649 41.667 0.00 0.00 0.00 2.40
82 83 5.546499 AGGGAGTGTTTGGTTACTGAATCTA 59.454 40.000 0.00 0.00 0.00 1.98
83 84 6.215636 AGGGAGTGTTTGGTTACTGAATCTAT 59.784 38.462 0.00 0.00 0.00 1.98
84 85 6.539103 GGGAGTGTTTGGTTACTGAATCTATC 59.461 42.308 0.00 0.00 0.00 2.08
85 86 6.539103 GGAGTGTTTGGTTACTGAATCTATCC 59.461 42.308 0.00 0.00 0.00 2.59
86 87 6.106673 AGTGTTTGGTTACTGAATCTATCCG 58.893 40.000 0.00 0.00 0.00 4.18
87 88 6.070995 AGTGTTTGGTTACTGAATCTATCCGA 60.071 38.462 0.00 0.00 0.00 4.55
88 89 6.761714 GTGTTTGGTTACTGAATCTATCCGAT 59.238 38.462 0.00 0.00 0.00 4.18
89 90 6.761242 TGTTTGGTTACTGAATCTATCCGATG 59.239 38.462 0.00 0.00 31.20 3.84
90 91 5.468540 TGGTTACTGAATCTATCCGATGG 57.531 43.478 0.00 0.00 31.20 3.51
91 92 4.283467 TGGTTACTGAATCTATCCGATGGG 59.717 45.833 0.00 0.00 31.20 4.00
101 102 2.746697 TCCGATGGGAGATGGTAGC 58.253 57.895 0.00 0.00 37.43 3.58
102 103 0.105709 TCCGATGGGAGATGGTAGCA 60.106 55.000 0.00 0.00 37.43 3.49
103 104 0.034059 CCGATGGGAGATGGTAGCAC 59.966 60.000 0.00 0.00 34.06 4.40
104 105 0.752658 CGATGGGAGATGGTAGCACA 59.247 55.000 0.00 0.00 0.00 4.57
105 106 1.269988 CGATGGGAGATGGTAGCACAG 60.270 57.143 0.00 0.00 0.00 3.66
106 107 1.071385 GATGGGAGATGGTAGCACAGG 59.929 57.143 0.00 0.00 0.00 4.00
107 108 0.042581 TGGGAGATGGTAGCACAGGA 59.957 55.000 0.00 0.00 0.00 3.86
108 109 1.344393 TGGGAGATGGTAGCACAGGAT 60.344 52.381 0.00 0.00 0.00 3.24
109 110 2.090775 TGGGAGATGGTAGCACAGGATA 60.091 50.000 0.00 0.00 0.00 2.59
110 111 3.177228 GGGAGATGGTAGCACAGGATAT 58.823 50.000 0.00 0.00 0.00 1.63
111 112 3.584848 GGGAGATGGTAGCACAGGATATT 59.415 47.826 0.00 0.00 0.00 1.28
112 113 4.042187 GGGAGATGGTAGCACAGGATATTT 59.958 45.833 0.00 0.00 0.00 1.40
113 114 5.456763 GGGAGATGGTAGCACAGGATATTTT 60.457 44.000 0.00 0.00 0.00 1.82
114 115 5.703130 GGAGATGGTAGCACAGGATATTTTC 59.297 44.000 0.00 0.00 0.00 2.29
115 116 6.252599 AGATGGTAGCACAGGATATTTTCA 57.747 37.500 0.00 0.00 0.00 2.69
116 117 6.662755 AGATGGTAGCACAGGATATTTTCAA 58.337 36.000 0.00 0.00 0.00 2.69
117 118 6.543831 AGATGGTAGCACAGGATATTTTCAAC 59.456 38.462 0.00 0.00 0.00 3.18
118 119 4.947388 TGGTAGCACAGGATATTTTCAACC 59.053 41.667 0.00 0.00 0.00 3.77
119 120 4.035208 GGTAGCACAGGATATTTTCAACCG 59.965 45.833 0.00 0.00 0.00 4.44
120 121 3.950397 AGCACAGGATATTTTCAACCGA 58.050 40.909 0.00 0.00 0.00 4.69
121 122 4.526970 AGCACAGGATATTTTCAACCGAT 58.473 39.130 0.00 0.00 0.00 4.18
122 123 4.949856 AGCACAGGATATTTTCAACCGATT 59.050 37.500 0.00 0.00 0.00 3.34
123 124 6.119536 AGCACAGGATATTTTCAACCGATTA 58.880 36.000 0.00 0.00 0.00 1.75
124 125 6.601613 AGCACAGGATATTTTCAACCGATTAA 59.398 34.615 0.00 0.00 0.00 1.40
125 126 6.912591 GCACAGGATATTTTCAACCGATTAAG 59.087 38.462 0.00 0.00 0.00 1.85
126 127 7.201696 GCACAGGATATTTTCAACCGATTAAGA 60.202 37.037 0.00 0.00 0.00 2.10
127 128 8.840321 CACAGGATATTTTCAACCGATTAAGAT 58.160 33.333 0.00 0.00 0.00 2.40
128 129 8.840321 ACAGGATATTTTCAACCGATTAAGATG 58.160 33.333 0.00 0.00 0.00 2.90
129 130 8.292448 CAGGATATTTTCAACCGATTAAGATGG 58.708 37.037 0.00 0.00 0.00 3.51
130 131 7.040409 AGGATATTTTCAACCGATTAAGATGGC 60.040 37.037 0.00 0.00 0.00 4.40
131 132 4.349663 TTTTCAACCGATTAAGATGGCG 57.650 40.909 0.00 0.00 0.00 5.69
135 136 3.678921 CCGATTAAGATGGCGGTCA 57.321 52.632 0.00 0.00 38.99 4.02
136 137 2.169832 CCGATTAAGATGGCGGTCAT 57.830 50.000 0.00 0.00 38.99 3.06
137 138 1.800586 CCGATTAAGATGGCGGTCATG 59.199 52.381 0.00 0.00 38.99 3.07
138 139 2.483876 CGATTAAGATGGCGGTCATGT 58.516 47.619 0.00 0.00 35.97 3.21
139 140 3.554129 CCGATTAAGATGGCGGTCATGTA 60.554 47.826 0.00 0.00 38.99 2.29
140 141 4.055360 CGATTAAGATGGCGGTCATGTAA 58.945 43.478 0.00 0.00 35.97 2.41
141 142 4.690748 CGATTAAGATGGCGGTCATGTAAT 59.309 41.667 0.00 3.92 35.97 1.89
142 143 5.867174 CGATTAAGATGGCGGTCATGTAATA 59.133 40.000 0.00 0.00 35.97 0.98
143 144 6.035005 CGATTAAGATGGCGGTCATGTAATAG 59.965 42.308 0.00 1.20 35.97 1.73
144 145 3.685139 AGATGGCGGTCATGTAATAGG 57.315 47.619 0.00 0.00 35.97 2.57
145 146 3.239449 AGATGGCGGTCATGTAATAGGA 58.761 45.455 0.00 0.00 35.97 2.94
146 147 3.840666 AGATGGCGGTCATGTAATAGGAT 59.159 43.478 0.00 0.00 35.97 3.24
147 148 5.023452 AGATGGCGGTCATGTAATAGGATA 58.977 41.667 0.00 0.00 35.97 2.59
148 149 4.801330 TGGCGGTCATGTAATAGGATAG 57.199 45.455 0.00 0.00 0.00 2.08
149 150 3.513912 TGGCGGTCATGTAATAGGATAGG 59.486 47.826 0.00 0.00 0.00 2.57
150 151 3.522553 GCGGTCATGTAATAGGATAGGC 58.477 50.000 0.00 0.00 0.00 3.93
151 152 3.056107 GCGGTCATGTAATAGGATAGGCA 60.056 47.826 0.00 0.00 0.00 4.75
152 153 4.562757 GCGGTCATGTAATAGGATAGGCAA 60.563 45.833 0.00 0.00 0.00 4.52
153 154 5.734720 CGGTCATGTAATAGGATAGGCAAT 58.265 41.667 0.00 0.00 0.00 3.56
154 155 6.173339 CGGTCATGTAATAGGATAGGCAATT 58.827 40.000 0.00 0.00 0.00 2.32
155 156 7.327975 CGGTCATGTAATAGGATAGGCAATTA 58.672 38.462 0.00 0.00 0.00 1.40
156 157 7.492669 CGGTCATGTAATAGGATAGGCAATTAG 59.507 40.741 0.00 0.00 0.00 1.73
157 158 8.322091 GGTCATGTAATAGGATAGGCAATTAGT 58.678 37.037 0.00 0.00 0.00 2.24
158 159 9.726438 GTCATGTAATAGGATAGGCAATTAGTT 57.274 33.333 0.00 0.00 0.00 2.24
162 163 9.569122 TGTAATAGGATAGGCAATTAGTTTTCC 57.431 33.333 0.00 0.00 0.00 3.13
163 164 9.794719 GTAATAGGATAGGCAATTAGTTTTCCT 57.205 33.333 0.00 0.00 36.39 3.36
170 171 6.456795 AGGCAATTAGTTTTCCTATCTTGC 57.543 37.500 0.00 0.00 40.49 4.01
171 172 6.190587 AGGCAATTAGTTTTCCTATCTTGCT 58.809 36.000 0.00 0.00 40.74 3.91
172 173 6.665248 AGGCAATTAGTTTTCCTATCTTGCTT 59.335 34.615 0.00 0.00 40.74 3.91
173 174 7.834181 AGGCAATTAGTTTTCCTATCTTGCTTA 59.166 33.333 0.00 0.00 40.74 3.09
174 175 8.633561 GGCAATTAGTTTTCCTATCTTGCTTAT 58.366 33.333 0.00 0.00 40.74 1.73
175 176 9.455847 GCAATTAGTTTTCCTATCTTGCTTATG 57.544 33.333 0.00 0.00 39.37 1.90
176 177 9.455847 CAATTAGTTTTCCTATCTTGCTTATGC 57.544 33.333 0.00 0.00 40.20 3.14
177 178 7.568199 TTAGTTTTCCTATCTTGCTTATGCC 57.432 36.000 0.00 0.00 38.71 4.40
178 179 5.509498 AGTTTTCCTATCTTGCTTATGCCA 58.491 37.500 0.00 0.00 38.71 4.92
179 180 5.591877 AGTTTTCCTATCTTGCTTATGCCAG 59.408 40.000 0.00 0.00 38.71 4.85
180 181 3.131709 TCCTATCTTGCTTATGCCAGC 57.868 47.619 0.00 0.00 40.55 4.85
181 182 2.157738 CCTATCTTGCTTATGCCAGCC 58.842 52.381 0.00 0.00 39.25 4.85
182 183 1.802960 CTATCTTGCTTATGCCAGCCG 59.197 52.381 0.00 0.00 39.25 5.52
183 184 0.820891 ATCTTGCTTATGCCAGCCGG 60.821 55.000 0.00 0.00 39.25 6.13
184 185 1.750399 CTTGCTTATGCCAGCCGGT 60.750 57.895 1.90 0.00 39.25 5.28
185 186 1.304052 TTGCTTATGCCAGCCGGTT 60.304 52.632 1.90 0.00 39.25 4.44
186 187 1.594194 TTGCTTATGCCAGCCGGTTG 61.594 55.000 11.98 11.98 39.25 3.77
187 188 2.046285 GCTTATGCCAGCCGGTTGT 61.046 57.895 17.69 1.06 33.21 3.32
188 189 1.802636 CTTATGCCAGCCGGTTGTG 59.197 57.895 17.69 9.73 33.28 3.33
189 190 1.656818 CTTATGCCAGCCGGTTGTGG 61.657 60.000 17.69 15.43 36.85 4.17
215 216 2.880963 TTGGCTAGTGTGTTTTTGGC 57.119 45.000 0.00 0.00 0.00 4.52
216 217 2.065899 TGGCTAGTGTGTTTTTGGCT 57.934 45.000 0.00 0.00 0.00 4.75
217 218 1.953686 TGGCTAGTGTGTTTTTGGCTC 59.046 47.619 0.00 0.00 0.00 4.70
218 219 2.230660 GGCTAGTGTGTTTTTGGCTCT 58.769 47.619 0.00 0.00 0.00 4.09
219 220 2.623416 GGCTAGTGTGTTTTTGGCTCTT 59.377 45.455 0.00 0.00 0.00 2.85
220 221 3.068165 GGCTAGTGTGTTTTTGGCTCTTT 59.932 43.478 0.00 0.00 0.00 2.52
221 222 4.044426 GCTAGTGTGTTTTTGGCTCTTTG 58.956 43.478 0.00 0.00 0.00 2.77
222 223 3.525268 AGTGTGTTTTTGGCTCTTTGG 57.475 42.857 0.00 0.00 0.00 3.28
223 224 1.933181 GTGTGTTTTTGGCTCTTTGGC 59.067 47.619 0.00 0.00 42.18 4.52
224 225 1.830477 TGTGTTTTTGGCTCTTTGGCT 59.170 42.857 0.00 0.00 42.34 4.75
225 226 2.159114 TGTGTTTTTGGCTCTTTGGCTC 60.159 45.455 0.00 0.00 42.34 4.70
226 227 2.101415 GTGTTTTTGGCTCTTTGGCTCT 59.899 45.455 0.00 0.00 42.34 4.09
227 228 2.765699 TGTTTTTGGCTCTTTGGCTCTT 59.234 40.909 0.00 0.00 42.34 2.85
228 229 3.197549 TGTTTTTGGCTCTTTGGCTCTTT 59.802 39.130 0.00 0.00 42.34 2.52
229 230 3.457610 TTTTGGCTCTTTGGCTCTTTG 57.542 42.857 0.00 0.00 42.34 2.77
230 231 2.071778 TTGGCTCTTTGGCTCTTTGT 57.928 45.000 0.00 0.00 42.34 2.83
231 232 1.321474 TGGCTCTTTGGCTCTTTGTG 58.679 50.000 0.00 0.00 42.34 3.33
232 233 1.133823 TGGCTCTTTGGCTCTTTGTGA 60.134 47.619 0.00 0.00 42.34 3.58
233 234 1.538950 GGCTCTTTGGCTCTTTGTGAG 59.461 52.381 0.00 0.00 45.33 3.51
234 235 2.225467 GCTCTTTGGCTCTTTGTGAGT 58.775 47.619 0.00 0.00 44.41 3.41
235 236 2.620585 GCTCTTTGGCTCTTTGTGAGTT 59.379 45.455 0.00 0.00 44.41 3.01
236 237 3.067320 GCTCTTTGGCTCTTTGTGAGTTT 59.933 43.478 0.00 0.00 44.41 2.66
237 238 4.604976 CTCTTTGGCTCTTTGTGAGTTTG 58.395 43.478 0.00 0.00 44.41 2.93
238 239 4.269183 TCTTTGGCTCTTTGTGAGTTTGA 58.731 39.130 0.00 0.00 44.41 2.69
239 240 4.096382 TCTTTGGCTCTTTGTGAGTTTGAC 59.904 41.667 0.00 0.00 44.41 3.18
240 241 1.939934 TGGCTCTTTGTGAGTTTGACG 59.060 47.619 0.00 0.00 44.41 4.35
241 242 1.940613 GGCTCTTTGTGAGTTTGACGT 59.059 47.619 0.00 0.00 44.41 4.34
242 243 2.286418 GGCTCTTTGTGAGTTTGACGTG 60.286 50.000 0.00 0.00 44.41 4.49
243 244 2.351726 GCTCTTTGTGAGTTTGACGTGT 59.648 45.455 0.00 0.00 44.41 4.49
244 245 3.181510 GCTCTTTGTGAGTTTGACGTGTT 60.182 43.478 0.00 0.00 44.41 3.32
245 246 4.033587 GCTCTTTGTGAGTTTGACGTGTTA 59.966 41.667 0.00 0.00 44.41 2.41
246 247 5.712217 TCTTTGTGAGTTTGACGTGTTAG 57.288 39.130 0.00 0.00 0.00 2.34
247 248 5.172934 TCTTTGTGAGTTTGACGTGTTAGT 58.827 37.500 0.00 0.00 0.00 2.24
248 249 5.640357 TCTTTGTGAGTTTGACGTGTTAGTT 59.360 36.000 0.00 0.00 0.00 2.24
249 250 5.866335 TTGTGAGTTTGACGTGTTAGTTT 57.134 34.783 0.00 0.00 0.00 2.66
250 251 5.211266 TGTGAGTTTGACGTGTTAGTTTG 57.789 39.130 0.00 0.00 0.00 2.93
251 252 4.691685 TGTGAGTTTGACGTGTTAGTTTGT 59.308 37.500 0.00 0.00 0.00 2.83
252 253 5.179742 TGTGAGTTTGACGTGTTAGTTTGTT 59.820 36.000 0.00 0.00 0.00 2.83
253 254 6.081693 GTGAGTTTGACGTGTTAGTTTGTTT 58.918 36.000 0.00 0.00 0.00 2.83
254 255 6.247791 GTGAGTTTGACGTGTTAGTTTGTTTC 59.752 38.462 0.00 0.00 0.00 2.78
255 256 6.073167 TGAGTTTGACGTGTTAGTTTGTTTCA 60.073 34.615 0.00 0.00 0.00 2.69
256 257 6.311723 AGTTTGACGTGTTAGTTTGTTTCAG 58.688 36.000 0.00 0.00 0.00 3.02
257 258 6.148150 AGTTTGACGTGTTAGTTTGTTTCAGA 59.852 34.615 0.00 0.00 0.00 3.27
258 259 5.459110 TGACGTGTTAGTTTGTTTCAGAC 57.541 39.130 0.00 0.00 0.00 3.51
259 260 5.172934 TGACGTGTTAGTTTGTTTCAGACT 58.827 37.500 0.00 0.00 33.42 3.24
260 261 5.640357 TGACGTGTTAGTTTGTTTCAGACTT 59.360 36.000 0.00 0.00 31.33 3.01
261 262 6.148150 TGACGTGTTAGTTTGTTTCAGACTTT 59.852 34.615 0.00 0.00 31.33 2.66
262 263 6.905578 ACGTGTTAGTTTGTTTCAGACTTTT 58.094 32.000 0.00 0.00 31.33 2.27
263 264 8.031848 ACGTGTTAGTTTGTTTCAGACTTTTA 57.968 30.769 0.00 0.00 31.33 1.52
264 265 8.173130 ACGTGTTAGTTTGTTTCAGACTTTTAG 58.827 33.333 0.00 0.00 31.33 1.85
265 266 8.385111 CGTGTTAGTTTGTTTCAGACTTTTAGA 58.615 33.333 0.00 0.00 31.33 2.10
266 267 9.486857 GTGTTAGTTTGTTTCAGACTTTTAGAC 57.513 33.333 0.00 0.00 31.33 2.59
267 268 8.671028 TGTTAGTTTGTTTCAGACTTTTAGACC 58.329 33.333 0.00 0.00 31.33 3.85
268 269 8.890718 GTTAGTTTGTTTCAGACTTTTAGACCT 58.109 33.333 0.00 0.00 31.33 3.85
269 270 7.939784 AGTTTGTTTCAGACTTTTAGACCTT 57.060 32.000 0.00 0.00 0.00 3.50
271 272 9.628500 AGTTTGTTTCAGACTTTTAGACCTTAT 57.372 29.630 0.00 0.00 0.00 1.73
274 275 9.621629 TTGTTTCAGACTTTTAGACCTTATTGA 57.378 29.630 0.00 0.00 0.00 2.57
275 276 9.621629 TGTTTCAGACTTTTAGACCTTATTGAA 57.378 29.630 0.00 0.00 0.00 2.69
276 277 9.880064 GTTTCAGACTTTTAGACCTTATTGAAC 57.120 33.333 0.00 0.00 0.00 3.18
277 278 8.617290 TTCAGACTTTTAGACCTTATTGAACC 57.383 34.615 0.00 0.00 0.00 3.62
278 279 7.974504 TCAGACTTTTAGACCTTATTGAACCT 58.025 34.615 0.00 0.00 0.00 3.50
279 280 9.096823 TCAGACTTTTAGACCTTATTGAACCTA 57.903 33.333 0.00 0.00 0.00 3.08
280 281 9.892130 CAGACTTTTAGACCTTATTGAACCTAT 57.108 33.333 0.00 0.00 0.00 2.57
315 316 9.656040 TTATAAAATTGGCCATATGCATCATTC 57.344 29.630 6.09 0.00 43.89 2.67
316 317 5.818678 AAATTGGCCATATGCATCATTCT 57.181 34.783 6.09 0.00 43.89 2.40
317 318 4.801330 ATTGGCCATATGCATCATTCTG 57.199 40.909 6.09 0.00 43.89 3.02
318 319 3.512219 TGGCCATATGCATCATTCTGA 57.488 42.857 0.00 0.00 43.89 3.27
319 320 4.042271 TGGCCATATGCATCATTCTGAT 57.958 40.909 0.00 0.00 43.89 2.90
330 331 2.847441 TCATTCTGATGATGCAGAGGC 58.153 47.619 0.00 0.00 44.93 4.70
331 332 2.438392 TCATTCTGATGATGCAGAGGCT 59.562 45.455 0.00 0.00 44.93 4.58
332 333 2.327200 TTCTGATGATGCAGAGGCTG 57.673 50.000 0.00 0.00 44.93 4.85
333 334 0.468648 TCTGATGATGCAGAGGCTGG 59.531 55.000 0.00 0.00 39.84 4.85
334 335 0.535328 CTGATGATGCAGAGGCTGGG 60.535 60.000 0.00 0.00 41.91 4.45
335 336 1.228184 GATGATGCAGAGGCTGGGG 60.228 63.158 0.00 0.00 41.91 4.96
336 337 1.695239 ATGATGCAGAGGCTGGGGA 60.695 57.895 0.00 0.00 41.91 4.81
337 338 1.706995 ATGATGCAGAGGCTGGGGAG 61.707 60.000 0.00 0.00 41.91 4.30
338 339 2.285969 ATGCAGAGGCTGGGGAGT 60.286 61.111 0.00 0.00 41.91 3.85
339 340 2.322638 GATGCAGAGGCTGGGGAGTC 62.323 65.000 0.00 0.00 41.91 3.36
340 341 3.791586 GCAGAGGCTGGGGAGTCC 61.792 72.222 0.00 0.00 36.96 3.85
341 342 2.040278 CAGAGGCTGGGGAGTCCT 59.960 66.667 9.58 0.00 36.20 3.85
342 343 2.063378 CAGAGGCTGGGGAGTCCTC 61.063 68.421 9.58 5.35 45.11 3.71
343 344 3.324888 AGAGGCTGGGGAGTCCTCC 62.325 68.421 6.58 8.17 45.73 4.30
393 394 9.804547 TTTTTAAATCGATGCTACAAATTTTGC 57.195 25.926 9.04 0.00 0.00 3.68
394 395 7.518731 TTAAATCGATGCTACAAATTTTGCC 57.481 32.000 9.04 0.00 0.00 4.52
395 396 4.717233 ATCGATGCTACAAATTTTGCCA 57.283 36.364 9.04 4.90 0.00 4.92
396 397 4.717233 TCGATGCTACAAATTTTGCCAT 57.283 36.364 9.04 9.07 0.00 4.40
397 398 4.422840 TCGATGCTACAAATTTTGCCATG 58.577 39.130 9.04 0.00 0.00 3.66
398 399 3.000523 CGATGCTACAAATTTTGCCATGC 59.999 43.478 9.04 8.63 0.00 4.06
399 400 3.681593 TGCTACAAATTTTGCCATGCT 57.318 38.095 9.04 0.00 0.00 3.79
400 401 4.797800 TGCTACAAATTTTGCCATGCTA 57.202 36.364 9.04 0.00 0.00 3.49
401 402 5.144692 TGCTACAAATTTTGCCATGCTAA 57.855 34.783 9.04 0.00 0.00 3.09
402 403 5.545588 TGCTACAAATTTTGCCATGCTAAA 58.454 33.333 9.04 0.00 37.61 1.85
403 404 5.994054 TGCTACAAATTTTGCCATGCTAAAA 59.006 32.000 9.04 7.50 36.93 1.52
404 405 6.484643 TGCTACAAATTTTGCCATGCTAAAAA 59.515 30.769 9.04 5.51 36.93 1.94
424 425 4.817318 AAAACATTTGTTGTCCACCACT 57.183 36.364 0.00 0.00 37.68 4.00
425 426 5.923733 AAAACATTTGTTGTCCACCACTA 57.076 34.783 0.00 0.00 37.68 2.74
426 427 6.478512 AAAACATTTGTTGTCCACCACTAT 57.521 33.333 0.00 0.00 37.68 2.12
427 428 6.478512 AAACATTTGTTGTCCACCACTATT 57.521 33.333 0.00 0.00 37.68 1.73
428 429 6.478512 AACATTTGTTGTCCACCACTATTT 57.521 33.333 0.00 0.00 37.68 1.40
429 430 6.478512 ACATTTGTTGTCCACCACTATTTT 57.521 33.333 0.00 0.00 30.89 1.82
430 431 6.883744 ACATTTGTTGTCCACCACTATTTTT 58.116 32.000 0.00 0.00 30.89 1.94
431 432 6.760770 ACATTTGTTGTCCACCACTATTTTTG 59.239 34.615 0.00 0.00 30.89 2.44
432 433 5.923733 TTGTTGTCCACCACTATTTTTGT 57.076 34.783 0.00 0.00 0.00 2.83
433 434 7.406031 TTTGTTGTCCACCACTATTTTTGTA 57.594 32.000 0.00 0.00 0.00 2.41
434 435 7.406031 TTGTTGTCCACCACTATTTTTGTAA 57.594 32.000 0.00 0.00 0.00 2.41
435 436 7.033530 TGTTGTCCACCACTATTTTTGTAAG 57.966 36.000 0.00 0.00 0.00 2.34
436 437 6.603997 TGTTGTCCACCACTATTTTTGTAAGT 59.396 34.615 0.00 0.00 0.00 2.24
437 438 6.627395 TGTCCACCACTATTTTTGTAAGTG 57.373 37.500 0.00 0.00 40.24 3.16
444 445 5.605327 CACTATTTTTGTAAGTGGTCGTCG 58.395 41.667 0.00 0.00 37.55 5.12
445 446 5.176223 CACTATTTTTGTAAGTGGTCGTCGT 59.824 40.000 0.00 0.00 37.55 4.34
446 447 4.720530 ATTTTTGTAAGTGGTCGTCGTC 57.279 40.909 0.00 0.00 0.00 4.20
447 448 2.867287 TTTGTAAGTGGTCGTCGTCA 57.133 45.000 0.00 0.00 0.00 4.35
448 449 3.374220 TTTGTAAGTGGTCGTCGTCAT 57.626 42.857 0.00 0.00 0.00 3.06
449 450 2.624316 TGTAAGTGGTCGTCGTCATC 57.376 50.000 0.00 0.00 0.00 2.92
450 451 1.200716 TGTAAGTGGTCGTCGTCATCC 59.799 52.381 0.00 0.00 0.00 3.51
451 452 1.200716 GTAAGTGGTCGTCGTCATCCA 59.799 52.381 0.00 0.00 0.00 3.41
452 453 0.895530 AAGTGGTCGTCGTCATCCAT 59.104 50.000 0.00 0.00 32.45 3.41
453 454 0.895530 AGTGGTCGTCGTCATCCATT 59.104 50.000 0.00 0.00 32.45 3.16
454 455 1.275291 AGTGGTCGTCGTCATCCATTT 59.725 47.619 0.00 0.00 32.45 2.32
455 456 2.494471 AGTGGTCGTCGTCATCCATTTA 59.506 45.455 0.00 0.00 32.45 1.40
456 457 2.858344 GTGGTCGTCGTCATCCATTTAG 59.142 50.000 0.00 0.00 32.45 1.85
457 458 2.159156 TGGTCGTCGTCATCCATTTAGG 60.159 50.000 0.00 0.00 39.47 2.69
468 469 1.679680 TCCATTTAGGAGGCTACGACG 59.320 52.381 0.00 0.00 43.07 5.12
469 470 1.488527 CATTTAGGAGGCTACGACGC 58.511 55.000 0.00 0.00 0.00 5.19
470 471 1.108776 ATTTAGGAGGCTACGACGCA 58.891 50.000 0.00 0.00 0.00 5.24
471 472 0.171903 TTTAGGAGGCTACGACGCAC 59.828 55.000 0.00 0.00 0.00 5.34
472 473 0.679002 TTAGGAGGCTACGACGCACT 60.679 55.000 0.00 0.00 0.00 4.40
473 474 1.094073 TAGGAGGCTACGACGCACTC 61.094 60.000 0.00 0.00 0.00 3.51
474 475 2.697761 GGAGGCTACGACGCACTCA 61.698 63.158 0.00 0.00 32.41 3.41
475 476 1.433879 GAGGCTACGACGCACTCAT 59.566 57.895 0.00 0.00 31.65 2.90
476 477 0.179134 GAGGCTACGACGCACTCATT 60.179 55.000 0.00 0.00 31.65 2.57
477 478 0.246635 AGGCTACGACGCACTCATTT 59.753 50.000 0.00 0.00 0.00 2.32
478 479 1.076332 GGCTACGACGCACTCATTTT 58.924 50.000 0.00 0.00 0.00 1.82
479 480 1.463444 GGCTACGACGCACTCATTTTT 59.537 47.619 0.00 0.00 0.00 1.94
480 481 2.474032 GGCTACGACGCACTCATTTTTC 60.474 50.000 0.00 0.00 0.00 2.29
481 482 2.156891 GCTACGACGCACTCATTTTTCA 59.843 45.455 0.00 0.00 0.00 2.69
482 483 3.363575 GCTACGACGCACTCATTTTTCAA 60.364 43.478 0.00 0.00 0.00 2.69
483 484 3.896648 ACGACGCACTCATTTTTCAAT 57.103 38.095 0.00 0.00 0.00 2.57
484 485 4.223320 ACGACGCACTCATTTTTCAATT 57.777 36.364 0.00 0.00 0.00 2.32
485 486 4.606961 ACGACGCACTCATTTTTCAATTT 58.393 34.783 0.00 0.00 0.00 1.82
486 487 5.040635 ACGACGCACTCATTTTTCAATTTT 58.959 33.333 0.00 0.00 0.00 1.82
487 488 6.202937 ACGACGCACTCATTTTTCAATTTTA 58.797 32.000 0.00 0.00 0.00 1.52
488 489 6.693545 ACGACGCACTCATTTTTCAATTTTAA 59.306 30.769 0.00 0.00 0.00 1.52
489 490 7.096640 ACGACGCACTCATTTTTCAATTTTAAG 60.097 33.333 0.00 0.00 0.00 1.85
490 491 7.406799 ACGCACTCATTTTTCAATTTTAAGG 57.593 32.000 0.00 0.00 0.00 2.69
491 492 6.073819 ACGCACTCATTTTTCAATTTTAAGGC 60.074 34.615 0.00 0.00 0.00 4.35
492 493 6.602179 GCACTCATTTTTCAATTTTAAGGCC 58.398 36.000 0.00 0.00 0.00 5.19
493 494 6.427853 GCACTCATTTTTCAATTTTAAGGCCT 59.572 34.615 0.00 0.00 0.00 5.19
494 495 7.360353 GCACTCATTTTTCAATTTTAAGGCCTC 60.360 37.037 5.23 0.00 0.00 4.70
495 496 6.868339 ACTCATTTTTCAATTTTAAGGCCTCG 59.132 34.615 5.23 0.00 0.00 4.63
496 497 6.754193 TCATTTTTCAATTTTAAGGCCTCGT 58.246 32.000 5.23 0.00 0.00 4.18
497 498 6.866248 TCATTTTTCAATTTTAAGGCCTCGTC 59.134 34.615 5.23 0.00 0.00 4.20
498 499 6.399639 TTTTTCAATTTTAAGGCCTCGTCT 57.600 33.333 5.23 0.00 0.00 4.18
499 500 6.399639 TTTTCAATTTTAAGGCCTCGTCTT 57.600 33.333 5.23 0.00 0.00 3.01
500 501 7.513371 TTTTCAATTTTAAGGCCTCGTCTTA 57.487 32.000 5.23 0.00 0.00 2.10
501 502 7.513371 TTTCAATTTTAAGGCCTCGTCTTAA 57.487 32.000 5.23 0.00 37.85 1.85
502 503 7.513371 TTCAATTTTAAGGCCTCGTCTTAAA 57.487 32.000 5.23 3.79 44.47 1.52
507 508 5.789710 TTAAGGCCTCGTCTTAAAATTCG 57.210 39.130 5.23 0.00 36.89 3.34
508 509 2.007608 AGGCCTCGTCTTAAAATTCGC 58.992 47.619 0.00 0.00 0.00 4.70
509 510 1.735571 GGCCTCGTCTTAAAATTCGCA 59.264 47.619 0.00 0.00 0.00 5.10
510 511 2.475685 GGCCTCGTCTTAAAATTCGCAC 60.476 50.000 0.00 0.00 0.00 5.34
511 512 2.475685 GCCTCGTCTTAAAATTCGCACC 60.476 50.000 0.00 0.00 0.00 5.01
512 513 2.222729 CCTCGTCTTAAAATTCGCACCG 60.223 50.000 0.00 0.00 0.00 4.94
513 514 1.727880 TCGTCTTAAAATTCGCACCGG 59.272 47.619 0.00 0.00 0.00 5.28
514 515 1.201987 CGTCTTAAAATTCGCACCGGG 60.202 52.381 6.32 0.00 0.00 5.73
515 516 1.131693 GTCTTAAAATTCGCACCGGGG 59.868 52.381 6.32 0.84 0.00 5.73
516 517 0.179148 CTTAAAATTCGCACCGGGGC 60.179 55.000 21.99 21.99 0.00 5.80
517 518 1.596895 TTAAAATTCGCACCGGGGCC 61.597 55.000 26.16 5.43 0.00 5.80
518 519 2.487274 TAAAATTCGCACCGGGGCCT 62.487 55.000 26.16 4.90 0.00 5.19
519 520 4.796495 AATTCGCACCGGGGCCTC 62.796 66.667 26.16 0.00 0.00 4.70
524 525 2.679996 GCACCGGGGCCTCAAATT 60.680 61.111 21.17 0.00 0.00 1.82
525 526 2.282783 GCACCGGGGCCTCAAATTT 61.283 57.895 21.17 0.00 0.00 1.82
526 527 1.890174 CACCGGGGCCTCAAATTTC 59.110 57.895 6.32 0.00 0.00 2.17
527 528 0.611896 CACCGGGGCCTCAAATTTCT 60.612 55.000 6.32 0.00 0.00 2.52
528 529 0.996583 ACCGGGGCCTCAAATTTCTA 59.003 50.000 6.32 0.00 0.00 2.10
529 530 1.064685 ACCGGGGCCTCAAATTTCTAG 60.065 52.381 6.32 0.00 0.00 2.43
530 531 1.211949 CCGGGGCCTCAAATTTCTAGA 59.788 52.381 1.96 0.00 0.00 2.43
531 532 2.565841 CGGGGCCTCAAATTTCTAGAG 58.434 52.381 1.96 0.00 0.00 2.43
532 533 2.170607 CGGGGCCTCAAATTTCTAGAGA 59.829 50.000 1.96 0.00 0.00 3.10
533 534 3.546724 GGGGCCTCAAATTTCTAGAGAC 58.453 50.000 0.84 0.00 0.00 3.36
534 535 3.198872 GGGCCTCAAATTTCTAGAGACG 58.801 50.000 0.84 0.00 0.00 4.18
535 536 3.198872 GGCCTCAAATTTCTAGAGACGG 58.801 50.000 0.00 0.00 0.00 4.79
536 537 2.609916 GCCTCAAATTTCTAGAGACGGC 59.390 50.000 5.76 0.00 0.00 5.68
537 538 3.198872 CCTCAAATTTCTAGAGACGGCC 58.801 50.000 5.76 0.00 0.00 6.13
538 539 3.198872 CTCAAATTTCTAGAGACGGCCC 58.801 50.000 0.00 0.00 0.00 5.80
570 571 5.364157 GTCTCACCCTGTAGATAAGGTTGAT 59.636 44.000 0.00 0.00 35.87 2.57
602 603 0.399949 AGTGTGTGGAGGACAGGGAA 60.400 55.000 0.00 0.00 34.28 3.97
642 643 1.017387 GATGGATTGGTTGCCTCGAC 58.983 55.000 0.00 0.00 0.00 4.20
666 667 2.640302 GCAGACGGCAGACCTGAGA 61.640 63.158 12.91 0.00 43.97 3.27
677 678 2.959030 CAGACCTGAGAACCGATGGATA 59.041 50.000 0.00 0.00 0.00 2.59
698 699 2.960129 CGCCATTCGTAGGACGCC 60.960 66.667 0.00 0.00 42.21 5.68
769 773 5.079643 ACCAATTTACAAAGACCATCTGCT 58.920 37.500 0.00 0.00 0.00 4.24
810 816 5.739752 ACGAAGCTACGTATGTATACACA 57.260 39.130 7.96 0.00 44.72 3.72
811 817 5.505286 ACGAAGCTACGTATGTATACACAC 58.495 41.667 7.96 5.88 44.72 3.82
874 909 2.029649 CCTGCCAACCATGACTTTTCTG 60.030 50.000 0.00 0.00 0.00 3.02
985 1020 6.020971 ACGTACAGACACATAGATCAAACA 57.979 37.500 0.00 0.00 0.00 2.83
1391 1426 6.818233 TGATACGGGTAATTAACACATGCTA 58.182 36.000 2.32 0.00 0.00 3.49
2012 2728 1.153269 GCTACTGCAAGGCTCCTCC 60.153 63.158 0.00 0.00 39.30 4.30
2148 2864 8.020819 TGCTAAAAAGGATTCAAATGAAGTACG 58.979 33.333 1.98 0.00 37.48 3.67
2182 2898 2.614779 CGAGACATCACAGAGTGCAAT 58.385 47.619 0.00 0.00 32.98 3.56
2206 2922 5.014858 ACCATGATTGATCACTCTTGCTTT 58.985 37.500 18.25 6.72 40.03 3.51
2316 3032 3.755628 TCCGCACGGGCTAGTGAC 61.756 66.667 8.62 7.56 44.43 3.67
2332 3048 6.915843 GGCTAGTGACTTTGAAAATTCGAAAA 59.084 34.615 0.00 0.00 30.57 2.29
2369 3088 9.418045 ACCGAAAACTTTTCATGTTAATATTGG 57.582 29.630 13.46 5.37 0.00 3.16
2397 3116 1.785518 CGAAATGTACGCGAACTTGGC 60.786 52.381 15.93 0.00 0.00 4.52
2418 3137 2.423538 CAGGCAATTTTCTCCTAACCGG 59.576 50.000 0.00 0.00 0.00 5.28
2541 3260 3.887716 ACATGCCCAATAGAAGAATCAGC 59.112 43.478 0.00 0.00 0.00 4.26
2569 3288 5.983720 ACGTATACATGGTAATCAGAACTGC 59.016 40.000 3.32 0.00 0.00 4.40
2594 3313 8.996271 GCAACCTAATTAGTGTAGTTGTACTTT 58.004 33.333 22.47 0.86 0.00 2.66
2648 3370 6.639686 GCATTGTTATTATAGACGAAGGACGA 59.360 38.462 0.00 0.00 45.77 4.20
2653 3375 8.028354 TGTTATTATAGACGAAGGACGACAAAA 58.972 33.333 0.00 0.00 45.77 2.44
2696 3418 3.616560 GCTTGAAGGACGTGGATAAGTGA 60.617 47.826 0.00 0.00 0.00 3.41
2723 3445 8.425577 AACTATGGTTCTGAATCAAGTAATCG 57.574 34.615 7.53 0.00 0.00 3.34
2726 3448 5.175859 TGGTTCTGAATCAAGTAATCGGAC 58.824 41.667 0.00 0.00 0.00 4.79
2764 3486 5.848406 TCCGACATATGTATGTACATGCAA 58.152 37.500 27.05 17.45 46.20 4.08
2834 3560 3.297134 AAGAGAGGTGTTTTGGCTTGA 57.703 42.857 0.00 0.00 0.00 3.02
2857 3583 3.443045 CAGTTGCACCCGGGATGC 61.443 66.667 32.02 30.71 43.68 3.91
2986 3712 5.656416 TCAGGGGGAGTATTAAAAATGCAAG 59.344 40.000 0.00 0.00 0.00 4.01
3038 3838 6.696441 TTTTTAGGCTTTGACCGTAGAAAA 57.304 33.333 0.00 0.00 33.69 2.29
3039 3839 6.696441 TTTTAGGCTTTGACCGTAGAAAAA 57.304 33.333 0.00 0.00 33.69 1.94
3040 3840 6.887626 TTTAGGCTTTGACCGTAGAAAAAT 57.112 33.333 0.00 0.00 33.69 1.82
3041 3841 6.887626 TTAGGCTTTGACCGTAGAAAAATT 57.112 33.333 0.00 0.00 33.69 1.82
3042 3842 5.121221 AGGCTTTGACCGTAGAAAAATTG 57.879 39.130 0.00 0.00 33.69 2.32
3043 3843 4.583073 AGGCTTTGACCGTAGAAAAATTGT 59.417 37.500 0.00 0.00 33.69 2.71
3044 3844 5.068591 AGGCTTTGACCGTAGAAAAATTGTT 59.931 36.000 0.00 0.00 33.69 2.83
3045 3845 5.401376 GGCTTTGACCGTAGAAAAATTGTTC 59.599 40.000 0.00 0.00 0.00 3.18
3046 3846 6.206498 GCTTTGACCGTAGAAAAATTGTTCT 58.794 36.000 15.21 15.21 40.89 3.01
3047 3847 7.357303 GCTTTGACCGTAGAAAAATTGTTCTA 58.643 34.615 13.19 13.19 38.75 2.10
3094 3894 9.725019 TCATCAAAGTTATGTACAAAGATGAGT 57.275 29.630 0.00 0.00 35.89 3.41
3095 3895 9.764870 CATCAAAGTTATGTACAAAGATGAGTG 57.235 33.333 0.00 0.00 34.75 3.51
3099 3899 8.498054 AAGTTATGTACAAAGATGAGTGATGG 57.502 34.615 0.00 0.00 0.00 3.51
3127 3927 7.650834 TGTTATGCTAAAAAGGCAAATGAAC 57.349 32.000 0.00 0.00 43.14 3.18
3139 3939 3.057315 GGCAAATGAACTACACTGCATGT 60.057 43.478 6.93 6.93 46.06 3.21
3150 3950 4.277515 ACACTGCATGTACAACAGAGAT 57.722 40.909 27.05 13.88 40.88 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.734606 CAACGCAGTGACTCGGAAAATA 59.265 45.455 0.00 0.00 45.00 1.40
1 2 1.531149 CAACGCAGTGACTCGGAAAAT 59.469 47.619 0.00 0.00 45.00 1.82
2 3 0.934496 CAACGCAGTGACTCGGAAAA 59.066 50.000 0.00 0.00 45.00 2.29
3 4 0.103390 TCAACGCAGTGACTCGGAAA 59.897 50.000 0.00 0.00 45.00 3.13
4 5 0.317160 ATCAACGCAGTGACTCGGAA 59.683 50.000 0.00 0.00 45.00 4.30
5 6 0.109272 GATCAACGCAGTGACTCGGA 60.109 55.000 0.00 0.00 45.00 4.55
6 7 1.078759 GGATCAACGCAGTGACTCGG 61.079 60.000 0.00 0.00 45.00 4.63
7 8 1.406219 CGGATCAACGCAGTGACTCG 61.406 60.000 0.00 3.55 45.00 4.18
8 9 0.388649 ACGGATCAACGCAGTGACTC 60.389 55.000 0.00 0.00 45.00 3.36
9 10 0.885879 TACGGATCAACGCAGTGACT 59.114 50.000 0.00 0.00 45.00 3.41
10 11 1.588404 CATACGGATCAACGCAGTGAC 59.412 52.381 0.00 0.00 45.00 3.67
11 12 1.203758 ACATACGGATCAACGCAGTGA 59.796 47.619 0.00 0.00 45.00 3.41
12 13 1.324435 CACATACGGATCAACGCAGTG 59.676 52.381 0.00 0.00 45.00 3.66
14 15 0.930310 CCACATACGGATCAACGCAG 59.070 55.000 0.00 0.00 37.37 5.18
15 16 0.248012 ACCACATACGGATCAACGCA 59.752 50.000 0.00 0.00 37.37 5.24
16 17 0.928229 GACCACATACGGATCAACGC 59.072 55.000 0.00 0.00 37.37 4.84
17 18 1.197055 CGACCACATACGGATCAACG 58.803 55.000 0.00 0.00 40.31 4.10
18 19 0.928229 GCGACCACATACGGATCAAC 59.072 55.000 0.00 0.00 0.00 3.18
19 20 0.821517 AGCGACCACATACGGATCAA 59.178 50.000 0.00 0.00 0.00 2.57
20 21 1.335810 GTAGCGACCACATACGGATCA 59.664 52.381 0.00 0.00 0.00 2.92
21 22 1.607628 AGTAGCGACCACATACGGATC 59.392 52.381 0.00 0.00 0.00 3.36
22 23 1.607628 GAGTAGCGACCACATACGGAT 59.392 52.381 0.00 0.00 0.00 4.18
23 24 1.019673 GAGTAGCGACCACATACGGA 58.980 55.000 0.00 0.00 0.00 4.69
24 25 0.736636 TGAGTAGCGACCACATACGG 59.263 55.000 0.00 0.00 0.00 4.02
25 26 1.400846 AGTGAGTAGCGACCACATACG 59.599 52.381 16.49 0.00 32.33 3.06
26 27 2.223525 GGAGTGAGTAGCGACCACATAC 60.224 54.545 16.49 9.69 32.33 2.39
27 28 2.022195 GGAGTGAGTAGCGACCACATA 58.978 52.381 16.49 0.00 32.33 2.29
28 29 0.818296 GGAGTGAGTAGCGACCACAT 59.182 55.000 16.49 6.07 32.33 3.21
29 30 1.583495 CGGAGTGAGTAGCGACCACA 61.583 60.000 16.49 6.02 32.33 4.17
30 31 1.136984 CGGAGTGAGTAGCGACCAC 59.863 63.158 9.46 9.46 0.00 4.16
31 32 1.002990 TCGGAGTGAGTAGCGACCA 60.003 57.895 0.00 0.00 0.00 4.02
32 33 1.428620 GTCGGAGTGAGTAGCGACC 59.571 63.158 0.00 0.00 0.00 4.79
33 34 1.060622 CGTCGGAGTGAGTAGCGAC 59.939 63.158 0.00 0.00 0.00 5.19
34 35 0.671472 TTCGTCGGAGTGAGTAGCGA 60.671 55.000 0.00 0.00 0.00 4.93
35 36 0.247735 CTTCGTCGGAGTGAGTAGCG 60.248 60.000 0.00 0.00 0.00 4.26
36 37 0.099082 CCTTCGTCGGAGTGAGTAGC 59.901 60.000 0.00 0.00 0.00 3.58
37 38 1.397692 GACCTTCGTCGGAGTGAGTAG 59.602 57.143 0.00 0.00 0.00 2.57
38 39 1.271001 TGACCTTCGTCGGAGTGAGTA 60.271 52.381 0.00 0.00 42.37 2.59
39 40 0.536687 TGACCTTCGTCGGAGTGAGT 60.537 55.000 0.00 0.00 42.37 3.41
40 41 0.169230 CTGACCTTCGTCGGAGTGAG 59.831 60.000 0.00 0.00 46.80 3.51
41 42 1.241990 CCTGACCTTCGTCGGAGTGA 61.242 60.000 0.00 0.00 46.80 3.41
42 43 1.213013 CCTGACCTTCGTCGGAGTG 59.787 63.158 0.00 0.00 46.80 3.51
43 44 1.977544 CCCTGACCTTCGTCGGAGT 60.978 63.158 0.00 0.00 46.80 3.85
44 45 1.658686 CTCCCTGACCTTCGTCGGAG 61.659 65.000 0.00 0.00 46.80 4.63
45 46 1.677966 CTCCCTGACCTTCGTCGGA 60.678 63.158 0.60 0.00 46.80 4.55
46 47 1.977544 ACTCCCTGACCTTCGTCGG 60.978 63.158 0.00 0.00 43.94 4.79
47 48 1.213013 CACTCCCTGACCTTCGTCG 59.787 63.158 0.00 0.00 42.37 5.12
48 49 0.680061 AACACTCCCTGACCTTCGTC 59.320 55.000 0.00 0.00 39.66 4.20
49 50 1.129058 AAACACTCCCTGACCTTCGT 58.871 50.000 0.00 0.00 0.00 3.85
50 51 1.512926 CAAACACTCCCTGACCTTCG 58.487 55.000 0.00 0.00 0.00 3.79
51 52 1.143073 ACCAAACACTCCCTGACCTTC 59.857 52.381 0.00 0.00 0.00 3.46
52 53 1.222567 ACCAAACACTCCCTGACCTT 58.777 50.000 0.00 0.00 0.00 3.50
53 54 1.222567 AACCAAACACTCCCTGACCT 58.777 50.000 0.00 0.00 0.00 3.85
54 55 2.105993 AGTAACCAAACACTCCCTGACC 59.894 50.000 0.00 0.00 0.00 4.02
55 56 3.139077 CAGTAACCAAACACTCCCTGAC 58.861 50.000 0.00 0.00 0.00 3.51
56 57 3.042682 TCAGTAACCAAACACTCCCTGA 58.957 45.455 0.00 0.00 0.00 3.86
57 58 3.485463 TCAGTAACCAAACACTCCCTG 57.515 47.619 0.00 0.00 0.00 4.45
58 59 4.351111 AGATTCAGTAACCAAACACTCCCT 59.649 41.667 0.00 0.00 0.00 4.20
59 60 4.652822 AGATTCAGTAACCAAACACTCCC 58.347 43.478 0.00 0.00 0.00 4.30
60 61 6.539103 GGATAGATTCAGTAACCAAACACTCC 59.461 42.308 0.00 0.00 0.00 3.85
61 62 6.255887 CGGATAGATTCAGTAACCAAACACTC 59.744 42.308 0.00 0.00 0.00 3.51
62 63 6.070995 TCGGATAGATTCAGTAACCAAACACT 60.071 38.462 0.00 0.00 0.00 3.55
63 64 6.103997 TCGGATAGATTCAGTAACCAAACAC 58.896 40.000 0.00 0.00 0.00 3.32
64 65 6.288941 TCGGATAGATTCAGTAACCAAACA 57.711 37.500 0.00 0.00 0.00 2.83
65 66 6.202954 CCATCGGATAGATTCAGTAACCAAAC 59.797 42.308 0.00 0.00 37.52 2.93
66 67 6.288294 CCATCGGATAGATTCAGTAACCAAA 58.712 40.000 0.00 0.00 37.52 3.28
67 68 5.221641 CCCATCGGATAGATTCAGTAACCAA 60.222 44.000 0.00 0.00 37.52 3.67
68 69 4.283467 CCCATCGGATAGATTCAGTAACCA 59.717 45.833 0.00 0.00 37.52 3.67
69 70 4.527038 TCCCATCGGATAGATTCAGTAACC 59.473 45.833 0.00 0.00 37.52 2.85
70 71 5.477291 TCTCCCATCGGATAGATTCAGTAAC 59.523 44.000 0.00 0.00 37.60 2.50
71 72 5.641155 TCTCCCATCGGATAGATTCAGTAA 58.359 41.667 0.00 0.00 37.60 2.24
72 73 5.256806 TCTCCCATCGGATAGATTCAGTA 57.743 43.478 0.00 0.00 37.60 2.74
73 74 4.119556 TCTCCCATCGGATAGATTCAGT 57.880 45.455 0.00 0.00 37.60 3.41
74 75 4.141981 CCATCTCCCATCGGATAGATTCAG 60.142 50.000 0.08 0.00 37.60 3.02
75 76 3.771479 CCATCTCCCATCGGATAGATTCA 59.229 47.826 0.08 0.00 37.60 2.57
76 77 3.772025 ACCATCTCCCATCGGATAGATTC 59.228 47.826 0.08 0.00 37.60 2.52
77 78 3.796111 ACCATCTCCCATCGGATAGATT 58.204 45.455 0.08 0.00 37.60 2.40
78 79 3.481559 ACCATCTCCCATCGGATAGAT 57.518 47.619 0.00 0.00 37.60 1.98
79 80 3.878131 GCTACCATCTCCCATCGGATAGA 60.878 52.174 0.00 0.00 37.60 1.98
80 81 2.428890 GCTACCATCTCCCATCGGATAG 59.571 54.545 0.00 0.00 37.60 2.08
81 82 2.225267 TGCTACCATCTCCCATCGGATA 60.225 50.000 0.00 0.00 37.60 2.59
82 83 1.270907 GCTACCATCTCCCATCGGAT 58.729 55.000 0.00 0.00 37.60 4.18
83 84 0.105709 TGCTACCATCTCCCATCGGA 60.106 55.000 0.00 0.00 36.45 4.55
84 85 0.034059 GTGCTACCATCTCCCATCGG 59.966 60.000 0.00 0.00 0.00 4.18
85 86 0.752658 TGTGCTACCATCTCCCATCG 59.247 55.000 0.00 0.00 0.00 3.84
86 87 1.071385 CCTGTGCTACCATCTCCCATC 59.929 57.143 0.00 0.00 0.00 3.51
87 88 1.135094 CCTGTGCTACCATCTCCCAT 58.865 55.000 0.00 0.00 0.00 4.00
88 89 0.042581 TCCTGTGCTACCATCTCCCA 59.957 55.000 0.00 0.00 0.00 4.37
89 90 1.428869 ATCCTGTGCTACCATCTCCC 58.571 55.000 0.00 0.00 0.00 4.30
90 91 4.899352 AATATCCTGTGCTACCATCTCC 57.101 45.455 0.00 0.00 0.00 3.71
91 92 6.291377 TGAAAATATCCTGTGCTACCATCTC 58.709 40.000 0.00 0.00 0.00 2.75
92 93 6.252599 TGAAAATATCCTGTGCTACCATCT 57.747 37.500 0.00 0.00 0.00 2.90
93 94 6.238759 GGTTGAAAATATCCTGTGCTACCATC 60.239 42.308 0.00 0.00 0.00 3.51
94 95 5.594317 GGTTGAAAATATCCTGTGCTACCAT 59.406 40.000 0.00 0.00 0.00 3.55
95 96 4.947388 GGTTGAAAATATCCTGTGCTACCA 59.053 41.667 0.00 0.00 0.00 3.25
96 97 4.035208 CGGTTGAAAATATCCTGTGCTACC 59.965 45.833 0.00 0.00 0.00 3.18
97 98 4.873827 TCGGTTGAAAATATCCTGTGCTAC 59.126 41.667 0.00 0.00 0.00 3.58
98 99 5.092554 TCGGTTGAAAATATCCTGTGCTA 57.907 39.130 0.00 0.00 0.00 3.49
99 100 3.950397 TCGGTTGAAAATATCCTGTGCT 58.050 40.909 0.00 0.00 0.00 4.40
100 101 4.900635 ATCGGTTGAAAATATCCTGTGC 57.099 40.909 0.00 0.00 0.00 4.57
101 102 8.208718 TCTTAATCGGTTGAAAATATCCTGTG 57.791 34.615 0.00 0.00 0.00 3.66
102 103 8.840321 CATCTTAATCGGTTGAAAATATCCTGT 58.160 33.333 0.00 0.00 0.00 4.00
103 104 8.292448 CCATCTTAATCGGTTGAAAATATCCTG 58.708 37.037 0.00 0.00 0.00 3.86
104 105 7.040409 GCCATCTTAATCGGTTGAAAATATCCT 60.040 37.037 0.00 0.00 0.00 3.24
105 106 7.084486 GCCATCTTAATCGGTTGAAAATATCC 58.916 38.462 0.00 0.00 0.00 2.59
106 107 6.797033 CGCCATCTTAATCGGTTGAAAATATC 59.203 38.462 0.00 0.00 0.00 1.63
107 108 6.293955 CCGCCATCTTAATCGGTTGAAAATAT 60.294 38.462 0.00 0.00 37.33 1.28
108 109 5.008217 CCGCCATCTTAATCGGTTGAAAATA 59.992 40.000 0.00 0.00 37.33 1.40
109 110 4.202010 CCGCCATCTTAATCGGTTGAAAAT 60.202 41.667 0.00 0.00 37.33 1.82
110 111 3.127895 CCGCCATCTTAATCGGTTGAAAA 59.872 43.478 0.00 0.00 37.33 2.29
111 112 2.680841 CCGCCATCTTAATCGGTTGAAA 59.319 45.455 0.00 0.00 37.33 2.69
112 113 2.285083 CCGCCATCTTAATCGGTTGAA 58.715 47.619 0.00 0.00 37.33 2.69
113 114 1.948104 CCGCCATCTTAATCGGTTGA 58.052 50.000 0.00 0.00 37.33 3.18
117 118 1.800586 CATGACCGCCATCTTAATCGG 59.199 52.381 0.00 0.00 46.61 4.18
118 119 2.483876 ACATGACCGCCATCTTAATCG 58.516 47.619 0.00 0.00 31.94 3.34
119 120 6.313905 CCTATTACATGACCGCCATCTTAATC 59.686 42.308 0.00 0.00 31.94 1.75
120 121 6.013725 TCCTATTACATGACCGCCATCTTAAT 60.014 38.462 0.00 0.00 31.94 1.40
121 122 5.305902 TCCTATTACATGACCGCCATCTTAA 59.694 40.000 0.00 0.00 31.94 1.85
122 123 4.836175 TCCTATTACATGACCGCCATCTTA 59.164 41.667 0.00 0.00 31.94 2.10
123 124 3.646162 TCCTATTACATGACCGCCATCTT 59.354 43.478 0.00 0.00 31.94 2.40
124 125 3.239449 TCCTATTACATGACCGCCATCT 58.761 45.455 0.00 0.00 31.94 2.90
125 126 3.678056 TCCTATTACATGACCGCCATC 57.322 47.619 0.00 0.00 31.94 3.51
126 127 4.162320 CCTATCCTATTACATGACCGCCAT 59.838 45.833 0.00 0.00 35.44 4.40
127 128 3.513912 CCTATCCTATTACATGACCGCCA 59.486 47.826 0.00 0.00 0.00 5.69
128 129 3.679083 GCCTATCCTATTACATGACCGCC 60.679 52.174 0.00 0.00 0.00 6.13
129 130 3.056107 TGCCTATCCTATTACATGACCGC 60.056 47.826 0.00 0.00 0.00 5.68
130 131 4.801330 TGCCTATCCTATTACATGACCG 57.199 45.455 0.00 0.00 0.00 4.79
131 132 8.322091 ACTAATTGCCTATCCTATTACATGACC 58.678 37.037 0.00 0.00 0.00 4.02
132 133 9.726438 AACTAATTGCCTATCCTATTACATGAC 57.274 33.333 0.00 0.00 0.00 3.06
136 137 9.569122 GGAAAACTAATTGCCTATCCTATTACA 57.431 33.333 0.00 0.00 33.30 2.41
137 138 9.794719 AGGAAAACTAATTGCCTATCCTATTAC 57.205 33.333 0.00 0.00 46.22 1.89
150 151 9.455847 GCATAAGCAAGATAGGAAAACTAATTG 57.544 33.333 0.00 0.00 41.58 2.32
151 152 8.633561 GGCATAAGCAAGATAGGAAAACTAATT 58.366 33.333 0.00 0.00 44.61 1.40
152 153 7.779798 TGGCATAAGCAAGATAGGAAAACTAAT 59.220 33.333 0.00 0.00 44.61 1.73
153 154 7.116075 TGGCATAAGCAAGATAGGAAAACTAA 58.884 34.615 0.00 0.00 44.61 2.24
154 155 6.658849 TGGCATAAGCAAGATAGGAAAACTA 58.341 36.000 0.00 0.00 44.61 2.24
155 156 5.509498 TGGCATAAGCAAGATAGGAAAACT 58.491 37.500 0.00 0.00 44.61 2.66
156 157 5.734503 GCTGGCATAAGCAAGATAGGAAAAC 60.735 44.000 0.00 0.00 45.14 2.43
157 158 4.339247 GCTGGCATAAGCAAGATAGGAAAA 59.661 41.667 0.00 0.00 45.14 2.29
158 159 3.885297 GCTGGCATAAGCAAGATAGGAAA 59.115 43.478 0.00 0.00 45.14 3.13
159 160 3.480470 GCTGGCATAAGCAAGATAGGAA 58.520 45.455 0.00 0.00 45.14 3.36
160 161 2.224621 GGCTGGCATAAGCAAGATAGGA 60.225 50.000 0.00 0.00 45.14 2.94
161 162 2.157738 GGCTGGCATAAGCAAGATAGG 58.842 52.381 0.00 0.00 45.14 2.57
162 163 1.802960 CGGCTGGCATAAGCAAGATAG 59.197 52.381 0.00 0.00 45.14 2.08
163 164 1.543208 CCGGCTGGCATAAGCAAGATA 60.543 52.381 0.00 0.00 45.14 1.98
164 165 0.820891 CCGGCTGGCATAAGCAAGAT 60.821 55.000 0.00 0.00 45.14 2.40
165 166 1.451927 CCGGCTGGCATAAGCAAGA 60.452 57.895 0.00 0.00 45.14 3.02
166 167 1.315257 AACCGGCTGGCATAAGCAAG 61.315 55.000 12.89 0.00 45.43 4.01
167 168 1.304052 AACCGGCTGGCATAAGCAA 60.304 52.632 12.89 0.00 45.43 3.91
168 169 2.045708 CAACCGGCTGGCATAAGCA 61.046 57.895 12.89 0.00 45.43 3.91
169 170 2.046285 ACAACCGGCTGGCATAAGC 61.046 57.895 12.89 0.00 42.75 3.09
170 171 1.656818 CCACAACCGGCTGGCATAAG 61.657 60.000 12.89 0.00 39.70 1.73
171 172 1.677300 CCACAACCGGCTGGCATAA 60.677 57.895 12.89 0.00 39.70 1.90
172 173 2.045438 CCACAACCGGCTGGCATA 60.045 61.111 12.89 0.00 39.70 3.14
193 194 3.935828 GCCAAAAACACACTAGCCAAAAA 59.064 39.130 0.00 0.00 0.00 1.94
194 195 3.196685 AGCCAAAAACACACTAGCCAAAA 59.803 39.130 0.00 0.00 0.00 2.44
195 196 2.763448 AGCCAAAAACACACTAGCCAAA 59.237 40.909 0.00 0.00 0.00 3.28
196 197 2.360801 GAGCCAAAAACACACTAGCCAA 59.639 45.455 0.00 0.00 0.00 4.52
197 198 1.953686 GAGCCAAAAACACACTAGCCA 59.046 47.619 0.00 0.00 0.00 4.75
198 199 2.230660 AGAGCCAAAAACACACTAGCC 58.769 47.619 0.00 0.00 0.00 3.93
199 200 3.990318 AAGAGCCAAAAACACACTAGC 57.010 42.857 0.00 0.00 0.00 3.42
200 201 4.610945 CCAAAGAGCCAAAAACACACTAG 58.389 43.478 0.00 0.00 0.00 2.57
201 202 3.181480 GCCAAAGAGCCAAAAACACACTA 60.181 43.478 0.00 0.00 0.00 2.74
202 203 2.418609 GCCAAAGAGCCAAAAACACACT 60.419 45.455 0.00 0.00 0.00 3.55
203 204 1.933181 GCCAAAGAGCCAAAAACACAC 59.067 47.619 0.00 0.00 0.00 3.82
204 205 1.830477 AGCCAAAGAGCCAAAAACACA 59.170 42.857 0.00 0.00 0.00 3.72
205 206 2.101415 AGAGCCAAAGAGCCAAAAACAC 59.899 45.455 0.00 0.00 0.00 3.32
206 207 2.387757 AGAGCCAAAGAGCCAAAAACA 58.612 42.857 0.00 0.00 0.00 2.83
207 208 3.459232 AAGAGCCAAAGAGCCAAAAAC 57.541 42.857 0.00 0.00 0.00 2.43
208 209 3.197549 ACAAAGAGCCAAAGAGCCAAAAA 59.802 39.130 0.00 0.00 0.00 1.94
209 210 2.765699 ACAAAGAGCCAAAGAGCCAAAA 59.234 40.909 0.00 0.00 0.00 2.44
210 211 2.101249 CACAAAGAGCCAAAGAGCCAAA 59.899 45.455 0.00 0.00 0.00 3.28
211 212 1.682854 CACAAAGAGCCAAAGAGCCAA 59.317 47.619 0.00 0.00 0.00 4.52
212 213 1.133823 TCACAAAGAGCCAAAGAGCCA 60.134 47.619 0.00 0.00 0.00 4.75
213 214 1.538950 CTCACAAAGAGCCAAAGAGCC 59.461 52.381 0.00 0.00 37.59 4.70
214 215 2.985406 CTCACAAAGAGCCAAAGAGC 57.015 50.000 0.00 0.00 37.59 4.09
224 225 5.172934 ACTAACACGTCAAACTCACAAAGA 58.827 37.500 0.00 0.00 0.00 2.52
225 226 5.464965 ACTAACACGTCAAACTCACAAAG 57.535 39.130 0.00 0.00 0.00 2.77
226 227 5.866335 AACTAACACGTCAAACTCACAAA 57.134 34.783 0.00 0.00 0.00 2.83
227 228 5.179742 ACAAACTAACACGTCAAACTCACAA 59.820 36.000 0.00 0.00 0.00 3.33
228 229 4.691685 ACAAACTAACACGTCAAACTCACA 59.308 37.500 0.00 0.00 0.00 3.58
229 230 5.212589 ACAAACTAACACGTCAAACTCAC 57.787 39.130 0.00 0.00 0.00 3.51
230 231 5.866335 AACAAACTAACACGTCAAACTCA 57.134 34.783 0.00 0.00 0.00 3.41
231 232 6.308675 TGAAACAAACTAACACGTCAAACTC 58.691 36.000 0.00 0.00 0.00 3.01
232 233 6.148150 TCTGAAACAAACTAACACGTCAAACT 59.852 34.615 0.00 0.00 0.00 2.66
233 234 6.247791 GTCTGAAACAAACTAACACGTCAAAC 59.752 38.462 0.00 0.00 0.00 2.93
234 235 6.148150 AGTCTGAAACAAACTAACACGTCAAA 59.852 34.615 0.00 0.00 0.00 2.69
235 236 5.640357 AGTCTGAAACAAACTAACACGTCAA 59.360 36.000 0.00 0.00 0.00 3.18
236 237 5.172934 AGTCTGAAACAAACTAACACGTCA 58.827 37.500 0.00 0.00 0.00 4.35
237 238 5.713822 AGTCTGAAACAAACTAACACGTC 57.286 39.130 0.00 0.00 0.00 4.34
238 239 6.490566 AAAGTCTGAAACAAACTAACACGT 57.509 33.333 0.00 0.00 0.00 4.49
239 240 8.385111 TCTAAAAGTCTGAAACAAACTAACACG 58.615 33.333 0.00 0.00 0.00 4.49
240 241 9.486857 GTCTAAAAGTCTGAAACAAACTAACAC 57.513 33.333 0.00 0.00 0.00 3.32
241 242 8.671028 GGTCTAAAAGTCTGAAACAAACTAACA 58.329 33.333 0.00 0.00 0.00 2.41
242 243 8.890718 AGGTCTAAAAGTCTGAAACAAACTAAC 58.109 33.333 0.00 0.00 0.00 2.34
243 244 9.457436 AAGGTCTAAAAGTCTGAAACAAACTAA 57.543 29.630 0.00 0.00 0.00 2.24
245 246 7.939784 AAGGTCTAAAAGTCTGAAACAAACT 57.060 32.000 0.00 0.00 0.00 2.66
248 249 9.621629 TCAATAAGGTCTAAAAGTCTGAAACAA 57.378 29.630 0.00 0.00 0.00 2.83
249 250 9.621629 TTCAATAAGGTCTAAAAGTCTGAAACA 57.378 29.630 0.00 0.00 0.00 2.83
250 251 9.880064 GTTCAATAAGGTCTAAAAGTCTGAAAC 57.120 33.333 0.00 0.00 0.00 2.78
251 252 9.063615 GGTTCAATAAGGTCTAAAAGTCTGAAA 57.936 33.333 0.00 0.00 0.00 2.69
252 253 8.437575 AGGTTCAATAAGGTCTAAAAGTCTGAA 58.562 33.333 0.00 0.00 0.00 3.02
253 254 7.974504 AGGTTCAATAAGGTCTAAAAGTCTGA 58.025 34.615 0.00 0.00 0.00 3.27
254 255 9.892130 ATAGGTTCAATAAGGTCTAAAAGTCTG 57.108 33.333 0.00 0.00 0.00 3.51
289 290 9.656040 GAATGATGCATATGGCCAATTTTATAA 57.344 29.630 10.96 0.00 43.89 0.98
290 291 9.038072 AGAATGATGCATATGGCCAATTTTATA 57.962 29.630 10.96 0.00 43.89 0.98
291 292 7.822334 CAGAATGATGCATATGGCCAATTTTAT 59.178 33.333 10.96 0.00 39.87 1.40
292 293 7.015389 TCAGAATGATGCATATGGCCAATTTTA 59.985 33.333 10.96 0.00 42.56 1.52
293 294 5.995282 CAGAATGATGCATATGGCCAATTTT 59.005 36.000 10.96 0.00 39.87 1.82
294 295 5.305902 TCAGAATGATGCATATGGCCAATTT 59.694 36.000 10.96 0.00 42.56 1.82
295 296 4.836175 TCAGAATGATGCATATGGCCAATT 59.164 37.500 10.96 1.18 42.56 2.32
296 297 4.412843 TCAGAATGATGCATATGGCCAAT 58.587 39.130 10.96 0.00 42.56 3.16
297 298 3.834938 TCAGAATGATGCATATGGCCAA 58.165 40.909 10.96 0.00 42.56 4.52
298 299 3.512219 TCAGAATGATGCATATGGCCA 57.488 42.857 8.56 8.56 42.56 5.36
310 311 2.438392 AGCCTCTGCATCATCAGAATGA 59.562 45.455 0.00 0.00 46.53 2.57
311 312 2.550180 CAGCCTCTGCATCATCAGAATG 59.450 50.000 0.00 0.00 41.99 2.67
312 313 2.487445 CCAGCCTCTGCATCATCAGAAT 60.487 50.000 0.00 0.00 41.99 2.40
313 314 1.134189 CCAGCCTCTGCATCATCAGAA 60.134 52.381 0.00 0.00 41.99 3.02
314 315 0.468648 CCAGCCTCTGCATCATCAGA 59.531 55.000 0.00 0.00 40.50 3.27
315 316 0.535328 CCCAGCCTCTGCATCATCAG 60.535 60.000 0.00 0.00 41.13 2.90
316 317 1.530283 CCCAGCCTCTGCATCATCA 59.470 57.895 0.00 0.00 41.13 3.07
317 318 1.228184 CCCCAGCCTCTGCATCATC 60.228 63.158 0.00 0.00 41.13 2.92
318 319 1.695239 TCCCCAGCCTCTGCATCAT 60.695 57.895 0.00 0.00 41.13 2.45
319 320 2.285592 TCCCCAGCCTCTGCATCA 60.286 61.111 0.00 0.00 41.13 3.07
320 321 2.322638 GACTCCCCAGCCTCTGCATC 62.323 65.000 0.00 0.00 41.13 3.91
321 322 2.285969 ACTCCCCAGCCTCTGCAT 60.286 61.111 0.00 0.00 41.13 3.96
322 323 3.005539 GACTCCCCAGCCTCTGCA 61.006 66.667 0.00 0.00 41.13 4.41
323 324 3.791586 GGACTCCCCAGCCTCTGC 61.792 72.222 0.00 0.00 37.95 4.26
324 325 2.040278 AGGACTCCCCAGCCTCTG 59.960 66.667 0.00 0.00 37.41 3.35
325 326 2.366570 GAGGACTCCCCAGCCTCT 59.633 66.667 0.00 0.00 43.79 3.69
326 327 2.766229 GGAGGACTCCCCAGCCTC 60.766 72.222 7.13 0.00 45.88 4.70
367 368 9.804547 GCAAAATTTGTAGCATCGATTTAAAAA 57.195 25.926 7.60 0.00 0.00 1.94
368 369 8.439286 GGCAAAATTTGTAGCATCGATTTAAAA 58.561 29.630 7.60 0.00 0.00 1.52
369 370 7.600375 TGGCAAAATTTGTAGCATCGATTTAAA 59.400 29.630 7.60 0.00 0.00 1.52
370 371 7.093354 TGGCAAAATTTGTAGCATCGATTTAA 58.907 30.769 7.60 0.00 0.00 1.52
371 372 6.625362 TGGCAAAATTTGTAGCATCGATTTA 58.375 32.000 7.60 0.00 0.00 1.40
372 373 5.477510 TGGCAAAATTTGTAGCATCGATTT 58.522 33.333 7.60 0.00 0.00 2.17
373 374 5.070770 TGGCAAAATTTGTAGCATCGATT 57.929 34.783 7.60 0.00 0.00 3.34
374 375 4.717233 TGGCAAAATTTGTAGCATCGAT 57.283 36.364 7.60 0.00 0.00 3.59
375 376 4.422840 CATGGCAAAATTTGTAGCATCGA 58.577 39.130 7.60 0.00 0.00 3.59
376 377 3.000523 GCATGGCAAAATTTGTAGCATCG 59.999 43.478 7.60 2.27 0.00 3.84
377 378 4.186159 AGCATGGCAAAATTTGTAGCATC 58.814 39.130 7.60 0.00 0.00 3.91
378 379 4.210724 AGCATGGCAAAATTTGTAGCAT 57.789 36.364 7.60 2.93 0.00 3.79
379 380 3.681593 AGCATGGCAAAATTTGTAGCA 57.318 38.095 7.60 1.16 0.00 3.49
380 381 6.479095 TTTTAGCATGGCAAAATTTGTAGC 57.521 33.333 7.60 6.64 0.00 3.58
402 403 5.159273 AGTGGTGGACAACAAATGTTTTT 57.841 34.783 0.00 0.00 44.12 1.94
403 404 4.817318 AGTGGTGGACAACAAATGTTTT 57.183 36.364 0.00 0.00 44.12 2.43
404 405 6.478512 AATAGTGGTGGACAACAAATGTTT 57.521 33.333 0.00 0.00 44.12 2.83
405 406 6.478512 AAATAGTGGTGGACAACAAATGTT 57.521 33.333 0.00 0.00 44.12 2.71
407 408 6.760770 ACAAAAATAGTGGTGGACAACAAATG 59.239 34.615 0.00 0.00 0.00 2.32
408 409 6.883744 ACAAAAATAGTGGTGGACAACAAAT 58.116 32.000 0.00 0.00 0.00 2.32
409 410 6.287589 ACAAAAATAGTGGTGGACAACAAA 57.712 33.333 0.00 0.00 0.00 2.83
410 411 5.923733 ACAAAAATAGTGGTGGACAACAA 57.076 34.783 0.00 0.00 0.00 2.83
411 412 6.603997 ACTTACAAAAATAGTGGTGGACAACA 59.396 34.615 0.00 0.00 0.00 3.33
412 413 6.915843 CACTTACAAAAATAGTGGTGGACAAC 59.084 38.462 0.00 0.00 36.50 3.32
413 414 7.033530 CACTTACAAAAATAGTGGTGGACAA 57.966 36.000 0.00 0.00 36.50 3.18
414 415 6.627395 CACTTACAAAAATAGTGGTGGACA 57.373 37.500 0.00 0.00 36.50 4.02
421 422 5.176223 ACGACGACCACTTACAAAAATAGTG 59.824 40.000 0.00 0.00 39.13 2.74
422 423 5.291971 ACGACGACCACTTACAAAAATAGT 58.708 37.500 0.00 0.00 0.00 2.12
423 424 5.403166 TGACGACGACCACTTACAAAAATAG 59.597 40.000 0.00 0.00 0.00 1.73
424 425 5.288015 TGACGACGACCACTTACAAAAATA 58.712 37.500 0.00 0.00 0.00 1.40
425 426 4.121317 TGACGACGACCACTTACAAAAAT 58.879 39.130 0.00 0.00 0.00 1.82
426 427 3.519579 TGACGACGACCACTTACAAAAA 58.480 40.909 0.00 0.00 0.00 1.94
427 428 3.162202 TGACGACGACCACTTACAAAA 57.838 42.857 0.00 0.00 0.00 2.44
428 429 2.867287 TGACGACGACCACTTACAAA 57.133 45.000 0.00 0.00 0.00 2.83
429 430 2.352030 GGATGACGACGACCACTTACAA 60.352 50.000 0.00 0.00 0.00 2.41
430 431 1.200716 GGATGACGACGACCACTTACA 59.799 52.381 0.00 0.00 0.00 2.41
431 432 1.200716 TGGATGACGACGACCACTTAC 59.799 52.381 0.00 0.00 0.00 2.34
432 433 1.536940 TGGATGACGACGACCACTTA 58.463 50.000 0.00 0.00 0.00 2.24
433 434 0.895530 ATGGATGACGACGACCACTT 59.104 50.000 0.00 0.00 35.19 3.16
434 435 0.895530 AATGGATGACGACGACCACT 59.104 50.000 0.00 0.00 35.19 4.00
435 436 1.722011 AAATGGATGACGACGACCAC 58.278 50.000 0.00 0.00 35.19 4.16
436 437 2.159156 CCTAAATGGATGACGACGACCA 60.159 50.000 0.00 6.09 38.35 4.02
437 438 2.100252 TCCTAAATGGATGACGACGACC 59.900 50.000 0.00 0.00 40.56 4.79
438 439 3.372954 CTCCTAAATGGATGACGACGAC 58.627 50.000 0.00 0.00 45.16 4.34
439 440 2.361119 CCTCCTAAATGGATGACGACGA 59.639 50.000 0.00 0.00 45.16 4.20
440 441 2.743938 CCTCCTAAATGGATGACGACG 58.256 52.381 0.00 0.00 45.16 5.12
441 442 2.103263 AGCCTCCTAAATGGATGACGAC 59.897 50.000 0.00 0.00 45.16 4.34
442 443 2.398588 AGCCTCCTAAATGGATGACGA 58.601 47.619 0.00 0.00 45.16 4.20
443 444 2.918712 AGCCTCCTAAATGGATGACG 57.081 50.000 0.00 0.00 45.16 4.35
444 445 3.321111 TCGTAGCCTCCTAAATGGATGAC 59.679 47.826 0.00 0.00 45.16 3.06
445 446 3.321111 GTCGTAGCCTCCTAAATGGATGA 59.679 47.826 0.00 0.00 45.16 2.92
446 447 3.654414 GTCGTAGCCTCCTAAATGGATG 58.346 50.000 0.00 0.00 45.16 3.51
447 448 2.296471 CGTCGTAGCCTCCTAAATGGAT 59.704 50.000 0.00 0.00 45.16 3.41
448 449 1.679680 CGTCGTAGCCTCCTAAATGGA 59.320 52.381 0.00 0.00 43.86 3.41
449 450 1.868519 GCGTCGTAGCCTCCTAAATGG 60.869 57.143 0.00 0.00 37.10 3.16
450 451 1.202371 TGCGTCGTAGCCTCCTAAATG 60.202 52.381 0.00 0.00 36.02 2.32
451 452 1.108776 TGCGTCGTAGCCTCCTAAAT 58.891 50.000 0.00 0.00 36.02 1.40
452 453 0.171903 GTGCGTCGTAGCCTCCTAAA 59.828 55.000 0.00 0.00 36.02 1.85
453 454 0.679002 AGTGCGTCGTAGCCTCCTAA 60.679 55.000 0.00 0.00 36.02 2.69
454 455 1.077930 AGTGCGTCGTAGCCTCCTA 60.078 57.895 0.00 0.00 36.02 2.94
455 456 2.361357 AGTGCGTCGTAGCCTCCT 60.361 61.111 0.00 0.00 36.02 3.69
456 457 2.005960 ATGAGTGCGTCGTAGCCTCC 62.006 60.000 14.72 1.94 36.02 4.30
457 458 0.179134 AATGAGTGCGTCGTAGCCTC 60.179 55.000 0.00 12.38 36.02 4.70
458 459 0.246635 AAATGAGTGCGTCGTAGCCT 59.753 50.000 0.00 0.38 36.02 4.58
459 460 1.076332 AAAATGAGTGCGTCGTAGCC 58.924 50.000 0.00 0.00 36.02 3.93
460 461 2.156891 TGAAAAATGAGTGCGTCGTAGC 59.843 45.455 0.00 0.00 37.71 3.58
461 462 4.383774 TTGAAAAATGAGTGCGTCGTAG 57.616 40.909 0.00 0.00 0.00 3.51
462 463 5.351233 AATTGAAAAATGAGTGCGTCGTA 57.649 34.783 0.00 0.00 0.00 3.43
463 464 3.896648 ATTGAAAAATGAGTGCGTCGT 57.103 38.095 0.00 0.00 0.00 4.34
464 465 5.559694 AAAATTGAAAAATGAGTGCGTCG 57.440 34.783 0.00 0.00 0.00 5.12
465 466 7.501515 CCTTAAAATTGAAAAATGAGTGCGTC 58.498 34.615 0.00 0.00 0.00 5.19
466 467 6.073819 GCCTTAAAATTGAAAAATGAGTGCGT 60.074 34.615 0.00 0.00 0.00 5.24
467 468 6.298853 GCCTTAAAATTGAAAAATGAGTGCG 58.701 36.000 0.00 0.00 0.00 5.34
468 469 6.427853 AGGCCTTAAAATTGAAAAATGAGTGC 59.572 34.615 0.00 0.00 0.00 4.40
469 470 7.148755 CGAGGCCTTAAAATTGAAAAATGAGTG 60.149 37.037 6.77 0.00 0.00 3.51
470 471 6.868339 CGAGGCCTTAAAATTGAAAAATGAGT 59.132 34.615 6.77 0.00 0.00 3.41
471 472 6.868339 ACGAGGCCTTAAAATTGAAAAATGAG 59.132 34.615 6.77 0.00 0.00 2.90
472 473 6.754193 ACGAGGCCTTAAAATTGAAAAATGA 58.246 32.000 6.77 0.00 0.00 2.57
473 474 6.868339 AGACGAGGCCTTAAAATTGAAAAATG 59.132 34.615 6.77 0.00 0.00 2.32
474 475 6.993079 AGACGAGGCCTTAAAATTGAAAAAT 58.007 32.000 6.77 0.00 0.00 1.82
475 476 6.399639 AGACGAGGCCTTAAAATTGAAAAA 57.600 33.333 6.77 0.00 0.00 1.94
476 477 6.399639 AAGACGAGGCCTTAAAATTGAAAA 57.600 33.333 6.77 0.00 0.00 2.29
477 478 7.513371 TTAAGACGAGGCCTTAAAATTGAAA 57.487 32.000 6.77 0.00 34.33 2.69
478 479 7.513371 TTTAAGACGAGGCCTTAAAATTGAA 57.487 32.000 6.77 0.00 40.83 2.69
479 480 7.513371 TTTTAAGACGAGGCCTTAAAATTGA 57.487 32.000 6.77 0.00 44.47 2.57
484 485 5.391203 GCGAATTTTAAGACGAGGCCTTAAA 60.391 40.000 6.77 4.38 41.56 1.52
485 486 4.093850 GCGAATTTTAAGACGAGGCCTTAA 59.906 41.667 6.77 0.00 35.14 1.85
486 487 3.619929 GCGAATTTTAAGACGAGGCCTTA 59.380 43.478 6.77 0.00 0.00 2.69
487 488 2.418976 GCGAATTTTAAGACGAGGCCTT 59.581 45.455 6.77 0.00 0.00 4.35
488 489 2.007608 GCGAATTTTAAGACGAGGCCT 58.992 47.619 3.86 3.86 0.00 5.19
489 490 1.735571 TGCGAATTTTAAGACGAGGCC 59.264 47.619 0.00 0.00 0.00 5.19
490 491 2.475685 GGTGCGAATTTTAAGACGAGGC 60.476 50.000 0.00 0.00 0.00 4.70
491 492 2.222729 CGGTGCGAATTTTAAGACGAGG 60.223 50.000 0.00 0.00 0.00 4.63
492 493 2.222729 CCGGTGCGAATTTTAAGACGAG 60.223 50.000 0.00 0.00 0.00 4.18
493 494 1.727880 CCGGTGCGAATTTTAAGACGA 59.272 47.619 0.00 0.00 0.00 4.20
494 495 1.201987 CCCGGTGCGAATTTTAAGACG 60.202 52.381 0.00 0.00 0.00 4.18
495 496 1.131693 CCCCGGTGCGAATTTTAAGAC 59.868 52.381 0.00 0.00 0.00 3.01
496 497 1.455248 CCCCGGTGCGAATTTTAAGA 58.545 50.000 0.00 0.00 0.00 2.10
497 498 0.179148 GCCCCGGTGCGAATTTTAAG 60.179 55.000 0.00 0.00 0.00 1.85
498 499 1.596895 GGCCCCGGTGCGAATTTTAA 61.597 55.000 1.83 0.00 0.00 1.52
499 500 2.047443 GGCCCCGGTGCGAATTTTA 61.047 57.895 1.83 0.00 0.00 1.52
500 501 3.378602 GGCCCCGGTGCGAATTTT 61.379 61.111 1.83 0.00 0.00 1.82
501 502 4.360405 AGGCCCCGGTGCGAATTT 62.360 61.111 1.83 0.00 0.00 1.82
502 503 4.796495 GAGGCCCCGGTGCGAATT 62.796 66.667 1.83 0.00 0.00 2.17
507 508 2.225791 GAAATTTGAGGCCCCGGTGC 62.226 60.000 0.00 0.00 0.00 5.01
508 509 0.611896 AGAAATTTGAGGCCCCGGTG 60.612 55.000 0.00 0.00 0.00 4.94
509 510 0.996583 TAGAAATTTGAGGCCCCGGT 59.003 50.000 0.00 0.00 0.00 5.28
510 511 1.211949 TCTAGAAATTTGAGGCCCCGG 59.788 52.381 0.00 0.00 0.00 5.73
511 512 2.170607 TCTCTAGAAATTTGAGGCCCCG 59.829 50.000 0.00 0.00 30.73 5.73
512 513 3.546724 GTCTCTAGAAATTTGAGGCCCC 58.453 50.000 0.00 0.00 28.58 5.80
513 514 3.198872 CGTCTCTAGAAATTTGAGGCCC 58.801 50.000 0.00 0.00 30.75 5.80
514 515 3.198872 CCGTCTCTAGAAATTTGAGGCC 58.801 50.000 0.00 0.00 30.75 5.19
515 516 2.609916 GCCGTCTCTAGAAATTTGAGGC 59.390 50.000 0.00 0.00 31.13 4.70
516 517 3.198872 GGCCGTCTCTAGAAATTTGAGG 58.801 50.000 0.00 0.00 30.73 3.86
517 518 3.118592 AGGGCCGTCTCTAGAAATTTGAG 60.119 47.826 0.00 0.00 0.00 3.02
518 519 2.838202 AGGGCCGTCTCTAGAAATTTGA 59.162 45.455 0.00 0.00 0.00 2.69
519 520 2.939103 CAGGGCCGTCTCTAGAAATTTG 59.061 50.000 0.00 0.00 0.00 2.32
520 521 2.092914 CCAGGGCCGTCTCTAGAAATTT 60.093 50.000 0.00 0.00 0.00 1.82
521 522 1.486726 CCAGGGCCGTCTCTAGAAATT 59.513 52.381 0.00 0.00 0.00 1.82
522 523 1.123928 CCAGGGCCGTCTCTAGAAAT 58.876 55.000 0.00 0.00 0.00 2.17
523 524 0.252103 ACCAGGGCCGTCTCTAGAAA 60.252 55.000 0.00 0.00 0.00 2.52
524 525 0.252103 AACCAGGGCCGTCTCTAGAA 60.252 55.000 0.00 0.00 0.00 2.10
525 526 0.252103 AAACCAGGGCCGTCTCTAGA 60.252 55.000 0.00 0.00 0.00 2.43
526 527 0.613777 AAAACCAGGGCCGTCTCTAG 59.386 55.000 0.00 0.00 0.00 2.43
527 528 0.323629 CAAAACCAGGGCCGTCTCTA 59.676 55.000 0.00 0.00 0.00 2.43
528 529 1.073199 CAAAACCAGGGCCGTCTCT 59.927 57.895 0.00 0.00 0.00 3.10
529 530 1.228154 ACAAAACCAGGGCCGTCTC 60.228 57.895 0.00 0.00 0.00 3.36
530 531 1.228154 GACAAAACCAGGGCCGTCT 60.228 57.895 0.00 0.00 0.00 4.18
531 532 1.228154 AGACAAAACCAGGGCCGTC 60.228 57.895 0.00 0.00 0.00 4.79
532 533 1.228154 GAGACAAAACCAGGGCCGT 60.228 57.895 0.00 0.00 0.00 5.68
533 534 1.228124 TGAGACAAAACCAGGGCCG 60.228 57.895 0.00 0.00 0.00 6.13
534 535 1.179174 GGTGAGACAAAACCAGGGCC 61.179 60.000 0.00 0.00 36.41 5.80
535 536 1.179174 GGGTGAGACAAAACCAGGGC 61.179 60.000 0.00 0.00 38.27 5.19
536 537 0.478507 AGGGTGAGACAAAACCAGGG 59.521 55.000 0.00 0.00 38.27 4.45
537 538 1.133792 ACAGGGTGAGACAAAACCAGG 60.134 52.381 0.00 0.00 38.27 4.45
538 539 2.348411 ACAGGGTGAGACAAAACCAG 57.652 50.000 0.00 0.00 38.27 4.00
570 571 1.352622 ACACACTGCCCTTTCTCCCA 61.353 55.000 0.00 0.00 0.00 4.37
602 603 4.259356 TCGTATCGTATGTATAGCAGCCT 58.741 43.478 0.00 0.00 0.00 4.58
642 643 4.680237 TCTGCCGTCTGCGTTGGG 62.680 66.667 0.00 0.00 45.60 4.12
666 667 0.107410 TGGCGCTTTATCCATCGGTT 60.107 50.000 7.64 0.00 0.00 4.44
677 678 1.082117 CGTCCTACGAATGGCGCTTT 61.082 55.000 7.64 0.71 46.05 3.51
769 773 2.557056 CGTTCTATCGATGAGCCCCTTA 59.443 50.000 8.54 0.00 0.00 2.69
810 816 2.092753 CCCTGATTGAGTATGTGGCAGT 60.093 50.000 0.00 0.00 0.00 4.40
811 817 2.569059 CCCTGATTGAGTATGTGGCAG 58.431 52.381 0.00 0.00 0.00 4.85
874 909 4.505808 GGTGAAAAGGAAGCTAGGTAGAC 58.494 47.826 0.00 0.00 0.00 2.59
985 1020 1.419762 GGCCATTGGGGTTTCACTTTT 59.580 47.619 4.53 0.00 39.65 2.27
1391 1426 5.104360 ACCAGTGCTATGAAGTCCATGTTAT 60.104 40.000 0.00 0.00 36.71 1.89
1791 2492 5.266733 ACACAAGCAAAAGATGAACACAT 57.733 34.783 0.00 0.00 0.00 3.21
2162 2878 2.070262 TTGCACTCTGTGATGTCTCG 57.930 50.000 1.52 0.00 35.23 4.04
2182 2898 5.363562 AGCAAGAGTGATCAATCATGGTA 57.636 39.130 25.75 0.00 39.30 3.25
2335 3054 8.628882 ACATGAAAAGTTTTCGGTTTTCTTAG 57.371 30.769 20.51 6.03 41.35 2.18
2336 3055 8.989653 AACATGAAAAGTTTTCGGTTTTCTTA 57.010 26.923 22.47 6.92 41.35 2.10
2337 3056 7.899178 AACATGAAAAGTTTTCGGTTTTCTT 57.101 28.000 22.47 9.06 41.35 2.52
2338 3057 8.989653 TTAACATGAAAAGTTTTCGGTTTTCT 57.010 26.923 28.24 15.87 41.35 2.52
2343 3062 9.418045 CCAATATTAACATGAAAAGTTTTCGGT 57.582 29.630 20.51 17.94 0.00 4.69
2357 3076 9.787532 CATTTCGAACACTTCCAATATTAACAT 57.212 29.630 0.00 0.00 0.00 2.71
2369 3088 2.406024 TCGCGTACATTTCGAACACTTC 59.594 45.455 5.77 0.00 0.00 3.01
2386 3105 2.476534 AATTGCCTGCCAAGTTCGCG 62.477 55.000 0.00 0.00 36.76 5.87
2397 3116 2.423538 CCGGTTAGGAGAAAATTGCCTG 59.576 50.000 0.00 0.00 45.00 4.85
2450 3169 4.805719 TCATTCTGATTGTCACATAGTCGC 59.194 41.667 0.08 0.00 0.00 5.19
2541 3260 7.491372 AGTTCTGATTACCATGTATACGTGTTG 59.509 37.037 20.91 10.99 0.00 3.33
2616 3338 8.812147 TCGTCTATAATAACAATGCTCGATTT 57.188 30.769 0.00 0.00 0.00 2.17
2653 3375 6.067217 AGCTGAATAGGGACAAGTACATTT 57.933 37.500 0.00 0.00 0.00 2.32
2665 3387 2.093447 ACGTCCTTCAAGCTGAATAGGG 60.093 50.000 0.00 0.00 35.59 3.53
2669 3391 1.347707 TCCACGTCCTTCAAGCTGAAT 59.652 47.619 0.00 0.00 35.59 2.57
2812 3538 4.787551 TCAAGCCAAAACACCTCTCTTTA 58.212 39.130 0.00 0.00 0.00 1.85
2816 3542 1.882623 CCTCAAGCCAAAACACCTCTC 59.117 52.381 0.00 0.00 0.00 3.20
2817 3543 1.494721 TCCTCAAGCCAAAACACCTCT 59.505 47.619 0.00 0.00 0.00 3.69
2964 3690 5.837829 TCTTGCATTTTTAATACTCCCCCT 58.162 37.500 0.00 0.00 0.00 4.79
3015 3815 6.696441 TTTTCTACGGTCAAAGCCTAAAAA 57.304 33.333 0.00 0.00 0.00 1.94
3016 3816 6.696441 TTTTTCTACGGTCAAAGCCTAAAA 57.304 33.333 0.00 0.00 0.00 1.52
3017 3817 6.887626 ATTTTTCTACGGTCAAAGCCTAAA 57.112 33.333 0.00 0.00 0.00 1.85
3018 3818 6.263617 ACAATTTTTCTACGGTCAAAGCCTAA 59.736 34.615 0.00 0.00 0.00 2.69
3019 3819 5.766174 ACAATTTTTCTACGGTCAAAGCCTA 59.234 36.000 0.00 0.00 0.00 3.93
3020 3820 4.583073 ACAATTTTTCTACGGTCAAAGCCT 59.417 37.500 0.00 0.00 0.00 4.58
3021 3821 4.866921 ACAATTTTTCTACGGTCAAAGCC 58.133 39.130 0.00 0.00 0.00 4.35
3022 3822 6.206498 AGAACAATTTTTCTACGGTCAAAGC 58.794 36.000 5.03 0.00 33.89 3.51
3023 3823 8.709496 GTAGAACAATTTTTCTACGGTCAAAG 57.291 34.615 22.30 0.00 44.91 2.77
3068 3868 9.725019 ACTCATCTTTGTACATAACTTTGATGA 57.275 29.630 0.00 5.82 36.34 2.92
3069 3869 9.764870 CACTCATCTTTGTACATAACTTTGATG 57.235 33.333 0.00 1.61 33.74 3.07
3070 3870 9.725019 TCACTCATCTTTGTACATAACTTTGAT 57.275 29.630 0.00 0.00 0.00 2.57
3071 3871 9.725019 ATCACTCATCTTTGTACATAACTTTGA 57.275 29.630 0.00 0.00 0.00 2.69
3072 3872 9.764870 CATCACTCATCTTTGTACATAACTTTG 57.235 33.333 0.00 0.00 0.00 2.77
3073 3873 8.950210 CCATCACTCATCTTTGTACATAACTTT 58.050 33.333 0.00 0.00 0.00 2.66
3074 3874 7.554118 CCCATCACTCATCTTTGTACATAACTT 59.446 37.037 0.00 0.00 0.00 2.66
3075 3875 7.050377 CCCATCACTCATCTTTGTACATAACT 58.950 38.462 0.00 0.00 0.00 2.24
3076 3876 6.260936 CCCCATCACTCATCTTTGTACATAAC 59.739 42.308 0.00 0.00 0.00 1.89
3077 3877 6.069673 ACCCCATCACTCATCTTTGTACATAA 60.070 38.462 0.00 0.00 0.00 1.90
3078 3878 5.428457 ACCCCATCACTCATCTTTGTACATA 59.572 40.000 0.00 0.00 0.00 2.29
3079 3879 4.228210 ACCCCATCACTCATCTTTGTACAT 59.772 41.667 0.00 0.00 0.00 2.29
3080 3880 3.587061 ACCCCATCACTCATCTTTGTACA 59.413 43.478 0.00 0.00 0.00 2.90
3081 3881 4.222124 ACCCCATCACTCATCTTTGTAC 57.778 45.455 0.00 0.00 0.00 2.90
3082 3882 4.042809 ACAACCCCATCACTCATCTTTGTA 59.957 41.667 0.00 0.00 0.00 2.41
3083 3883 3.181429 ACAACCCCATCACTCATCTTTGT 60.181 43.478 0.00 0.00 0.00 2.83
3084 3884 3.424703 ACAACCCCATCACTCATCTTTG 58.575 45.455 0.00 0.00 0.00 2.77
3085 3885 3.814504 ACAACCCCATCACTCATCTTT 57.185 42.857 0.00 0.00 0.00 2.52
3086 3886 3.814504 AACAACCCCATCACTCATCTT 57.185 42.857 0.00 0.00 0.00 2.40
3087 3887 4.785301 CATAACAACCCCATCACTCATCT 58.215 43.478 0.00 0.00 0.00 2.90
3088 3888 3.316308 GCATAACAACCCCATCACTCATC 59.684 47.826 0.00 0.00 0.00 2.92
3089 3889 3.053395 AGCATAACAACCCCATCACTCAT 60.053 43.478 0.00 0.00 0.00 2.90
3090 3890 2.308570 AGCATAACAACCCCATCACTCA 59.691 45.455 0.00 0.00 0.00 3.41
3091 3891 3.004752 AGCATAACAACCCCATCACTC 57.995 47.619 0.00 0.00 0.00 3.51
3092 3892 4.584638 TTAGCATAACAACCCCATCACT 57.415 40.909 0.00 0.00 0.00 3.41
3093 3893 5.652994 TTTTAGCATAACAACCCCATCAC 57.347 39.130 0.00 0.00 0.00 3.06
3094 3894 5.186797 CCTTTTTAGCATAACAACCCCATCA 59.813 40.000 0.00 0.00 0.00 3.07
3095 3895 5.660460 CCTTTTTAGCATAACAACCCCATC 58.340 41.667 0.00 0.00 0.00 3.51
3099 3899 4.529109 TGCCTTTTTAGCATAACAACCC 57.471 40.909 0.00 0.00 34.69 4.11
3127 3927 4.809673 TCTCTGTTGTACATGCAGTGTAG 58.190 43.478 20.39 13.96 43.70 2.74
3139 3939 5.418840 TGCACTCTGTGATATCTCTGTTGTA 59.581 40.000 3.98 4.19 35.23 2.41
3150 3950 3.007831 TCATGGTGTTGCACTCTGTGATA 59.992 43.478 1.52 0.00 35.23 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.