Multiple sequence alignment - TraesCS5A01G062900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G062900 chr5A 100.000 6924 0 0 1 6924 68544162 68551085 0.000000e+00 12787.0
1 TraesCS5A01G062900 chr5A 85.075 134 20 0 549 682 678353144 678353277 3.370000e-28 137.0
2 TraesCS5A01G062900 chr5D 91.821 2543 116 42 4402 6924 73397285 73399755 0.000000e+00 3459.0
3 TraesCS5A01G062900 chr5D 89.279 1679 98 44 1002 2663 73394035 73395648 0.000000e+00 2028.0
4 TraesCS5A01G062900 chr5D 96.884 1059 21 3 2951 4002 73395874 73396927 0.000000e+00 1762.0
5 TraesCS5A01G062900 chr5D 96.452 310 6 4 4002 4308 73396979 73397286 2.230000e-139 507.0
6 TraesCS5A01G062900 chr5D 90.314 382 15 14 6553 6924 73463963 73464332 1.350000e-131 481.0
7 TraesCS5A01G062900 chr5D 89.683 126 8 5 4307 4431 521371581 521371702 9.300000e-34 156.0
8 TraesCS5A01G062900 chr5D 85.315 143 18 3 549 689 540126512 540126653 2.010000e-30 145.0
9 TraesCS5A01G062900 chr5B 90.637 2072 120 39 838 2900 81188611 81190617 0.000000e+00 2684.0
10 TraesCS5A01G062900 chr5B 96.471 1360 45 3 2951 4308 81190635 81191993 0.000000e+00 2242.0
11 TraesCS5A01G062900 chr5B 94.834 1026 36 5 4402 5415 81191992 81193012 0.000000e+00 1585.0
12 TraesCS5A01G062900 chr5B 89.157 747 65 7 5414 6148 81193063 81193805 0.000000e+00 917.0
13 TraesCS5A01G062900 chr5B 83.717 651 37 36 6284 6924 81193827 81194418 1.020000e-152 551.0
14 TraesCS5A01G062900 chr5B 86.732 407 34 11 6331 6733 711573000 711573390 1.070000e-117 435.0
15 TraesCS5A01G062900 chr5B 82.890 263 32 8 298 549 295202653 295202913 2.510000e-54 224.0
16 TraesCS5A01G062900 chr5B 84.536 194 10 5 676 849 81184402 81184595 2.570000e-39 174.0
17 TraesCS5A01G062900 chr5B 93.458 107 6 1 4306 4412 352127252 352127357 2.590000e-34 158.0
18 TraesCS5A01G062900 chr5B 87.879 132 16 0 549 680 609093355 609093486 9.300000e-34 156.0
19 TraesCS5A01G062900 chr7D 79.742 1165 179 45 4584 5718 473623045 473624182 0.000000e+00 791.0
20 TraesCS5A01G062900 chr7D 79.187 418 66 19 3781 4194 473622148 473622548 3.180000e-68 270.0
21 TraesCS5A01G062900 chr7D 88.496 226 18 4 6358 6579 60613515 60613736 4.120000e-67 267.0
22 TraesCS5A01G062900 chr7D 85.115 262 28 9 292 543 36786559 36786819 2.480000e-64 257.0
23 TraesCS5A01G062900 chr7D 90.476 84 6 2 6650 6733 60613744 60613825 7.340000e-20 110.0
24 TraesCS5A01G062900 chr7D 79.104 134 26 2 1 133 264961873 264962005 2.660000e-14 91.6
25 TraesCS5A01G062900 chr7B 79.522 1172 180 46 4584 5725 497882023 497883164 0.000000e+00 780.0
26 TraesCS5A01G062900 chr7B 78.729 409 65 15 3781 4184 497881406 497881797 3.210000e-63 254.0
27 TraesCS5A01G062900 chr7B 92.727 110 7 1 4297 4405 589348426 589348317 2.590000e-34 158.0
28 TraesCS5A01G062900 chr7A 81.356 1003 137 36 4756 5731 522496191 522495212 0.000000e+00 771.0
29 TraesCS5A01G062900 chr7A 86.978 407 33 10 6331 6733 12398972 12398582 2.290000e-119 440.0
30 TraesCS5A01G062900 chr7A 91.597 119 7 3 4297 4414 628008467 628008583 2.000000e-35 161.0
31 TraesCS5A01G062900 chr7A 87.121 132 17 0 549 680 359054527 359054658 4.330000e-32 150.0
32 TraesCS5A01G062900 chr7A 82.734 139 16 6 549 685 559197316 559197184 4.390000e-22 117.0
33 TraesCS5A01G062900 chr7A 91.667 72 6 0 4123 4194 522496896 522496825 4.420000e-17 100.0
34 TraesCS5A01G062900 chr2B 86.700 594 27 11 1 555 237181042 237181622 4.590000e-171 612.0
35 TraesCS5A01G062900 chr2B 95.238 105 5 0 4302 4406 63293192 63293088 4.300000e-37 167.0
36 TraesCS5A01G062900 chr6B 84.327 587 38 22 2 549 169470492 169471063 6.150000e-145 525.0
37 TraesCS5A01G062900 chr6B 91.270 252 18 2 292 539 131276966 131276715 2.390000e-89 340.0
38 TraesCS5A01G062900 chr6B 83.588 262 33 6 298 549 708404103 708403842 3.230000e-58 237.0
39 TraesCS5A01G062900 chr3B 87.719 342 26 14 222 549 203700944 203701283 1.090000e-102 385.0
40 TraesCS5A01G062900 chr3B 87.266 267 30 2 292 554 88707405 88707139 1.130000e-77 302.0
41 TraesCS5A01G062900 chr3B 91.716 169 13 1 1 168 203700382 203700550 4.180000e-57 233.0
42 TraesCS5A01G062900 chr3B 100.000 35 0 0 175 209 203700577 203700611 1.610000e-06 65.8
43 TraesCS5A01G062900 chr4A 89.868 227 13 8 267 483 603164747 603164521 4.090000e-72 283.0
44 TraesCS5A01G062900 chr6A 80.608 263 40 8 298 556 127578978 127578723 7.090000e-45 193.0
45 TraesCS5A01G062900 chr2A 80.000 270 31 15 1 247 216355366 216355097 1.980000e-40 178.0
46 TraesCS5A01G062900 chr2A 92.661 109 7 1 4306 4414 68155823 68155930 9.300000e-34 156.0
47 TraesCS5A01G062900 chr1B 87.234 141 18 0 549 689 334657692 334657832 2.000000e-35 161.0
48 TraesCS5A01G062900 chr2D 94.231 104 6 0 4301 4404 445894986 445894883 7.190000e-35 159.0
49 TraesCS5A01G062900 chr3D 87.879 132 15 1 549 680 318513374 318513504 3.340000e-33 154.0
50 TraesCS5A01G062900 chr3D 89.256 121 10 3 4297 4417 605264282 605264165 1.560000e-31 148.0
51 TraesCS5A01G062900 chr4B 85.915 142 18 2 549 689 74160648 74160508 4.330000e-32 150.0
52 TraesCS5A01G062900 chr1D 87.121 132 17 0 549 680 385605924 385605793 4.330000e-32 150.0
53 TraesCS5A01G062900 chr4D 89.474 114 11 1 4306 4418 205963441 205963554 7.240000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G062900 chr5A 68544162 68551085 6923 False 12787.000000 12787 100.0000 1 6924 1 chr5A.!!$F1 6923
1 TraesCS5A01G062900 chr5D 73394035 73399755 5720 False 1939.000000 3459 93.6090 1002 6924 4 chr5D.!!$F4 5922
2 TraesCS5A01G062900 chr5B 81188611 81194418 5807 False 1595.800000 2684 90.9632 838 6924 5 chr5B.!!$F6 6086
3 TraesCS5A01G062900 chr7D 473622148 473624182 2034 False 530.500000 791 79.4645 3781 5718 2 chr7D.!!$F4 1937
4 TraesCS5A01G062900 chr7B 497881406 497883164 1758 False 517.000000 780 79.1255 3781 5725 2 chr7B.!!$F1 1944
5 TraesCS5A01G062900 chr7A 522495212 522496896 1684 True 435.500000 771 86.5115 4123 5731 2 chr7A.!!$R3 1608
6 TraesCS5A01G062900 chr2B 237181042 237181622 580 False 612.000000 612 86.7000 1 555 1 chr2B.!!$F1 554
7 TraesCS5A01G062900 chr6B 169470492 169471063 571 False 525.000000 525 84.3270 2 549 1 chr6B.!!$F1 547
8 TraesCS5A01G062900 chr3B 203700382 203701283 901 False 227.933333 385 93.1450 1 549 3 chr3B.!!$F1 548

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
756 1110 0.039437 TTCGCGGCGGAATCTAGATC 60.039 55.000 23.46 0.0 0.00 2.75 F
823 1177 0.106149 GTGTCAACTCCCACGTTCCT 59.894 55.000 0.00 0.0 0.00 3.36 F
1656 2021 0.166814 GACAAGCCAACGCATCTGAC 59.833 55.000 0.00 0.0 37.52 3.51 F
2736 3115 0.783579 GTTGTTACGGTAGCGCGAAA 59.216 50.000 12.10 3.7 0.00 3.46 F
4252 4698 0.249996 AAGTGTTTGCTGCCCATTGC 60.250 50.000 0.00 0.0 41.77 3.56 F
5163 5872 1.562475 TGGATTAGCTTTTACCGCCCT 59.438 47.619 0.00 0.0 0.00 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2707 3086 1.065998 ACCGTAACAACCATATGCCGT 60.066 47.619 0.0 0.0 0.00 5.68 R
2742 3121 2.027192 TGAGAGCTTAACACCACCATCC 60.027 50.000 0.0 0.0 0.00 3.51 R
2956 3338 1.478510 CAGCCCATCAGTACTCGACTT 59.521 52.381 0.0 0.0 35.64 3.01 R
4378 4925 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.0 0.0 0.00 3.16 R
5585 6357 0.609131 AACCGCCTCACCATTTCCAG 60.609 55.000 0.0 0.0 0.00 3.86 R
6312 7101 1.472082 CACTGACTGCAAACACCACAA 59.528 47.619 0.0 0.0 0.00 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 1.560505 CCCATAACAAAGCAGCCCTT 58.439 50.000 0.00 0.00 34.51 3.95
61 62 2.093306 ACGGAATCGAATGCTTGTGA 57.907 45.000 0.00 0.00 40.11 3.58
98 99 1.606313 CGGTGGGCATGGGAGTTTT 60.606 57.895 0.00 0.00 0.00 2.43
101 102 1.337118 GTGGGCATGGGAGTTTTTGA 58.663 50.000 0.00 0.00 0.00 2.69
160 161 0.528924 TGAGCTGTCAATGGCAATGC 59.471 50.000 0.00 0.00 0.00 3.56
161 162 0.528924 GAGCTGTCAATGGCAATGCA 59.471 50.000 7.79 0.00 0.00 3.96
163 164 1.067142 AGCTGTCAATGGCAATGCAAG 60.067 47.619 7.79 0.00 0.00 4.01
215 548 7.023197 TCATAGATTTACATCGAAGTCGTCA 57.977 36.000 0.00 0.00 40.80 4.35
302 651 3.749665 GCTCAGATAGCCTCTCAATGT 57.250 47.619 0.00 0.00 46.25 2.71
304 653 4.808558 GCTCAGATAGCCTCTCAATGTAG 58.191 47.826 0.00 0.00 46.25 2.74
318 667 7.177392 CCTCTCAATGTAGTTTCCCTTCAAAAT 59.823 37.037 0.00 0.00 0.00 1.82
337 686 4.961438 AATTGAAATTGCCACCTCTTGT 57.039 36.364 0.00 0.00 0.00 3.16
414 767 0.259065 ATACCCCTCTCGAGCTCACA 59.741 55.000 15.40 0.00 0.00 3.58
473 827 1.535462 CAACCATTCTTCCACGACACC 59.465 52.381 0.00 0.00 0.00 4.16
502 856 0.740737 CCCGGCCAATCTTGATTGAC 59.259 55.000 20.95 11.90 33.55 3.18
514 868 8.133627 CCAATCTTGATTGACAGGAATCATTAC 58.866 37.037 20.95 0.00 41.03 1.89
518 872 9.300681 TCTTGATTGACAGGAATCATTACTTTT 57.699 29.630 0.00 0.00 41.03 2.27
552 906 3.988379 CACGGGCATTTGTGCTAATAT 57.012 42.857 0.07 0.00 34.73 1.28
555 909 5.451908 CACGGGCATTTGTGCTAATATAAG 58.548 41.667 0.07 0.00 34.73 1.73
556 910 4.518970 ACGGGCATTTGTGCTAATATAAGG 59.481 41.667 0.07 0.00 34.73 2.69
557 911 4.518970 CGGGCATTTGTGCTAATATAAGGT 59.481 41.667 0.07 0.00 34.73 3.50
558 912 5.703592 CGGGCATTTGTGCTAATATAAGGTA 59.296 40.000 0.07 0.00 34.73 3.08
559 913 6.205853 CGGGCATTTGTGCTAATATAAGGTAA 59.794 38.462 0.07 0.00 34.73 2.85
560 914 7.094377 CGGGCATTTGTGCTAATATAAGGTAAT 60.094 37.037 0.07 0.00 34.73 1.89
561 915 8.585018 GGGCATTTGTGCTAATATAAGGTAATT 58.415 33.333 0.07 0.00 34.73 1.40
562 916 9.626045 GGCATTTGTGCTAATATAAGGTAATTC 57.374 33.333 0.07 0.00 34.73 2.17
567 921 9.860650 TTGTGCTAATATAAGGTAATTCATGGT 57.139 29.630 0.00 0.00 0.00 3.55
568 922 9.502091 TGTGCTAATATAAGGTAATTCATGGTC 57.498 33.333 0.00 0.00 0.00 4.02
569 923 9.502091 GTGCTAATATAAGGTAATTCATGGTCA 57.498 33.333 0.00 0.00 0.00 4.02
570 924 9.725019 TGCTAATATAAGGTAATTCATGGTCAG 57.275 33.333 0.00 0.00 0.00 3.51
571 925 9.944376 GCTAATATAAGGTAATTCATGGTCAGA 57.056 33.333 0.00 0.00 0.00 3.27
576 930 8.915057 ATAAGGTAATTCATGGTCAGAATCTG 57.085 34.615 3.38 3.38 34.78 2.90
577 931 6.566079 AGGTAATTCATGGTCAGAATCTGA 57.434 37.500 9.18 9.18 38.25 3.27
578 932 7.146715 AGGTAATTCATGGTCAGAATCTGAT 57.853 36.000 16.68 0.00 42.73 2.90
579 933 6.996879 AGGTAATTCATGGTCAGAATCTGATG 59.003 38.462 16.68 10.80 42.73 3.07
580 934 6.994496 GGTAATTCATGGTCAGAATCTGATGA 59.006 38.462 16.68 12.96 42.73 2.92
581 935 7.500227 GGTAATTCATGGTCAGAATCTGATGAA 59.500 37.037 22.37 22.37 42.73 2.57
582 936 6.939132 ATTCATGGTCAGAATCTGATGAAC 57.061 37.500 22.50 9.76 42.73 3.18
583 937 5.425196 TCATGGTCAGAATCTGATGAACA 57.575 39.130 16.68 12.99 46.51 3.18
589 943 8.812513 TGGTCAGAATCTGATGAACATTTATT 57.187 30.769 16.68 0.00 42.73 1.40
590 944 9.904198 TGGTCAGAATCTGATGAACATTTATTA 57.096 29.630 16.68 0.00 42.73 0.98
636 990 9.485206 AACAGATAAATCACAAACTAACGTACT 57.515 29.630 0.00 0.00 0.00 2.73
673 1027 7.618502 TCCTATTAAAACGCACATACATTGT 57.381 32.000 0.00 0.00 39.91 2.71
674 1028 8.046294 TCCTATTAAAACGCACATACATTGTT 57.954 30.769 0.00 0.00 36.00 2.83
675 1029 8.178964 TCCTATTAAAACGCACATACATTGTTC 58.821 33.333 0.00 0.00 36.00 3.18
676 1030 8.181573 CCTATTAAAACGCACATACATTGTTCT 58.818 33.333 0.00 0.00 36.00 3.01
679 1033 6.554334 AAAACGCACATACATTGTTCTAGT 57.446 33.333 0.00 0.00 36.00 2.57
680 1034 7.661127 AAAACGCACATACATTGTTCTAGTA 57.339 32.000 0.00 0.00 36.00 1.82
681 1035 6.642683 AACGCACATACATTGTTCTAGTAC 57.357 37.500 0.00 0.00 36.00 2.73
682 1036 5.962433 ACGCACATACATTGTTCTAGTACT 58.038 37.500 0.00 0.00 36.00 2.73
683 1037 7.092137 ACGCACATACATTGTTCTAGTACTA 57.908 36.000 1.89 1.89 36.00 1.82
684 1038 7.713750 ACGCACATACATTGTTCTAGTACTAT 58.286 34.615 2.33 0.00 36.00 2.12
685 1039 8.195436 ACGCACATACATTGTTCTAGTACTATT 58.805 33.333 2.33 0.00 36.00 1.73
686 1040 9.673454 CGCACATACATTGTTCTAGTACTATTA 57.327 33.333 2.33 0.00 36.00 0.98
696 1050 9.947669 TTGTTCTAGTACTATTAAATCTCGAGC 57.052 33.333 7.81 0.00 0.00 5.03
697 1051 8.281194 TGTTCTAGTACTATTAAATCTCGAGCG 58.719 37.037 7.81 0.00 0.00 5.03
698 1052 8.494347 GTTCTAGTACTATTAAATCTCGAGCGA 58.506 37.037 7.81 0.00 0.00 4.93
699 1053 8.242085 TCTAGTACTATTAAATCTCGAGCGAG 57.758 38.462 13.36 13.36 43.21 5.03
709 1063 2.786854 TCTCGAGCGAGAAAAAGATCG 58.213 47.619 19.11 0.00 46.89 3.69
716 1070 3.109230 CGAGAAAAAGATCGCACCAAG 57.891 47.619 0.00 0.00 31.42 3.61
717 1071 2.726066 CGAGAAAAAGATCGCACCAAGC 60.726 50.000 0.00 0.00 40.87 4.01
718 1072 2.226437 GAGAAAAAGATCGCACCAAGCA 59.774 45.455 0.00 0.00 46.13 3.91
719 1073 2.030805 AGAAAAAGATCGCACCAAGCAC 60.031 45.455 0.00 0.00 46.13 4.40
720 1074 0.238289 AAAAGATCGCACCAAGCACG 59.762 50.000 0.00 0.00 46.13 5.34
721 1075 0.884704 AAAGATCGCACCAAGCACGT 60.885 50.000 0.00 0.00 46.13 4.49
722 1076 1.291877 AAGATCGCACCAAGCACGTC 61.292 55.000 0.00 0.00 46.13 4.34
723 1077 2.027073 GATCGCACCAAGCACGTCA 61.027 57.895 0.00 0.00 46.13 4.35
724 1078 2.227968 GATCGCACCAAGCACGTCAC 62.228 60.000 0.00 0.00 46.13 3.67
725 1079 2.715532 ATCGCACCAAGCACGTCACT 62.716 55.000 0.00 0.00 46.13 3.41
726 1080 2.633657 GCACCAAGCACGTCACTG 59.366 61.111 0.00 0.00 44.79 3.66
727 1081 2.180204 GCACCAAGCACGTCACTGT 61.180 57.895 0.00 0.00 44.79 3.55
728 1082 0.878523 GCACCAAGCACGTCACTGTA 60.879 55.000 0.00 0.00 44.79 2.74
729 1083 1.577468 CACCAAGCACGTCACTGTAA 58.423 50.000 0.00 0.00 0.00 2.41
730 1084 1.526887 CACCAAGCACGTCACTGTAAG 59.473 52.381 0.00 0.00 42.29 2.34
731 1085 0.512952 CCAAGCACGTCACTGTAAGC 59.487 55.000 0.00 0.00 37.60 3.09
732 1086 0.161658 CAAGCACGTCACTGTAAGCG 59.838 55.000 0.00 0.00 37.60 4.68
733 1087 1.557443 AAGCACGTCACTGTAAGCGC 61.557 55.000 0.00 0.00 37.60 5.92
734 1088 3.011760 GCACGTCACTGTAAGCGCC 62.012 63.158 2.29 0.00 37.60 6.53
735 1089 2.048503 ACGTCACTGTAAGCGCCC 60.049 61.111 2.29 0.00 37.60 6.13
736 1090 3.179265 CGTCACTGTAAGCGCCCG 61.179 66.667 2.29 0.00 37.60 6.13
737 1091 2.048503 GTCACTGTAAGCGCCCGT 60.049 61.111 2.29 0.00 37.60 5.28
738 1092 1.666872 GTCACTGTAAGCGCCCGTT 60.667 57.895 2.29 0.00 37.60 4.44
739 1093 1.373748 TCACTGTAAGCGCCCGTTC 60.374 57.895 2.29 0.00 37.60 3.95
740 1094 2.431942 ACTGTAAGCGCCCGTTCG 60.432 61.111 2.29 0.00 37.60 3.95
752 1106 2.278336 CGTTCGCGGCGGAATCTA 60.278 61.111 23.46 0.00 36.88 1.98
753 1107 2.293627 CGTTCGCGGCGGAATCTAG 61.294 63.158 23.46 3.73 36.88 2.43
754 1108 1.065273 GTTCGCGGCGGAATCTAGA 59.935 57.895 23.46 0.00 0.00 2.43
755 1109 0.318784 GTTCGCGGCGGAATCTAGAT 60.319 55.000 23.46 0.00 0.00 1.98
756 1110 0.039437 TTCGCGGCGGAATCTAGATC 60.039 55.000 23.46 0.00 0.00 2.75
757 1111 1.444553 CGCGGCGGAATCTAGATCC 60.445 63.158 15.84 8.23 0.00 3.36
763 1117 2.654802 GGAATCTAGATCCGCCGGA 58.345 57.895 8.97 8.97 35.55 5.14
764 1118 0.966920 GGAATCTAGATCCGCCGGAA 59.033 55.000 11.19 0.00 34.34 4.30
765 1119 1.067495 GGAATCTAGATCCGCCGGAAG 60.067 57.143 11.19 2.86 34.34 3.46
766 1120 1.614413 GAATCTAGATCCGCCGGAAGT 59.386 52.381 11.19 2.31 34.34 3.01
767 1121 2.581216 ATCTAGATCCGCCGGAAGTA 57.419 50.000 11.19 3.57 34.34 2.24
768 1122 1.602311 TCTAGATCCGCCGGAAGTAC 58.398 55.000 11.19 2.22 34.34 2.73
769 1123 0.597072 CTAGATCCGCCGGAAGTACC 59.403 60.000 11.19 0.00 34.34 3.34
770 1124 0.106569 TAGATCCGCCGGAAGTACCA 60.107 55.000 11.19 0.00 38.90 3.25
771 1125 0.759436 AGATCCGCCGGAAGTACCAT 60.759 55.000 11.19 0.00 38.90 3.55
772 1126 0.319641 GATCCGCCGGAAGTACCATC 60.320 60.000 11.19 0.00 38.90 3.51
773 1127 1.755393 ATCCGCCGGAAGTACCATCC 61.755 60.000 11.19 5.42 38.90 3.51
774 1128 2.108362 CGCCGGAAGTACCATCCC 59.892 66.667 5.05 0.00 38.90 3.85
775 1129 2.509422 GCCGGAAGTACCATCCCC 59.491 66.667 5.05 0.00 38.90 4.81
776 1130 2.372074 GCCGGAAGTACCATCCCCA 61.372 63.158 5.05 0.00 38.90 4.96
777 1131 1.705997 GCCGGAAGTACCATCCCCAT 61.706 60.000 5.05 0.00 38.90 4.00
778 1132 1.724545 CCGGAAGTACCATCCCCATA 58.275 55.000 0.00 0.00 38.90 2.74
779 1133 2.266279 CCGGAAGTACCATCCCCATAT 58.734 52.381 0.00 0.00 38.90 1.78
780 1134 2.027192 CCGGAAGTACCATCCCCATATG 60.027 54.545 0.00 0.00 38.90 1.78
781 1135 2.615493 CGGAAGTACCATCCCCATATGC 60.615 54.545 9.17 0.00 38.90 3.14
782 1136 2.290960 GGAAGTACCATCCCCATATGCC 60.291 54.545 0.00 0.00 38.79 4.40
783 1137 1.372501 AGTACCATCCCCATATGCCC 58.627 55.000 0.00 0.00 0.00 5.36
784 1138 1.132069 AGTACCATCCCCATATGCCCT 60.132 52.381 0.00 0.00 0.00 5.19
785 1139 2.115421 AGTACCATCCCCATATGCCCTA 59.885 50.000 0.00 0.00 0.00 3.53
786 1140 1.372501 ACCATCCCCATATGCCCTAC 58.627 55.000 0.00 0.00 0.00 3.18
787 1141 1.371467 CCATCCCCATATGCCCTACA 58.629 55.000 0.00 0.00 0.00 2.74
788 1142 1.004745 CCATCCCCATATGCCCTACAC 59.995 57.143 0.00 0.00 0.00 2.90
789 1143 1.004745 CATCCCCATATGCCCTACACC 59.995 57.143 0.00 0.00 0.00 4.16
790 1144 1.125093 TCCCCATATGCCCTACACCG 61.125 60.000 0.00 0.00 0.00 4.94
791 1145 1.302511 CCCATATGCCCTACACCGC 60.303 63.158 0.00 0.00 0.00 5.68
792 1146 1.449782 CCATATGCCCTACACCGCA 59.550 57.895 0.00 0.00 39.79 5.69
793 1147 0.603707 CCATATGCCCTACACCGCAG 60.604 60.000 0.00 0.00 38.64 5.18
813 1167 3.103911 CGCCGGACGTGTCAACTC 61.104 66.667 5.05 0.00 36.87 3.01
814 1168 2.737376 GCCGGACGTGTCAACTCC 60.737 66.667 5.05 0.00 0.00 3.85
815 1169 2.048503 CCGGACGTGTCAACTCCC 60.049 66.667 0.00 0.00 0.00 4.30
816 1170 2.732016 CGGACGTGTCAACTCCCA 59.268 61.111 0.00 0.00 0.00 4.37
817 1171 1.663702 CGGACGTGTCAACTCCCAC 60.664 63.158 0.00 0.00 0.00 4.61
820 1174 4.431035 CGTGTCAACTCCCACGTT 57.569 55.556 4.17 0.00 46.87 3.99
821 1175 2.222592 CGTGTCAACTCCCACGTTC 58.777 57.895 4.17 0.00 46.87 3.95
822 1176 1.219522 CGTGTCAACTCCCACGTTCC 61.220 60.000 4.17 0.00 46.87 3.62
823 1177 0.106149 GTGTCAACTCCCACGTTCCT 59.894 55.000 0.00 0.00 0.00 3.36
824 1178 0.834612 TGTCAACTCCCACGTTCCTT 59.165 50.000 0.00 0.00 0.00 3.36
825 1179 1.202604 TGTCAACTCCCACGTTCCTTC 60.203 52.381 0.00 0.00 0.00 3.46
826 1180 0.395312 TCAACTCCCACGTTCCTTCC 59.605 55.000 0.00 0.00 0.00 3.46
827 1181 0.949105 CAACTCCCACGTTCCTTCCG 60.949 60.000 0.00 0.00 0.00 4.30
828 1182 1.405272 AACTCCCACGTTCCTTCCGT 61.405 55.000 0.00 0.00 39.52 4.69
829 1183 1.080025 CTCCCACGTTCCTTCCGTC 60.080 63.158 0.00 0.00 36.17 4.79
830 1184 1.532316 TCCCACGTTCCTTCCGTCT 60.532 57.895 0.00 0.00 36.17 4.18
831 1185 1.117142 TCCCACGTTCCTTCCGTCTT 61.117 55.000 0.00 0.00 36.17 3.01
832 1186 0.250166 CCCACGTTCCTTCCGTCTTT 60.250 55.000 0.00 0.00 36.17 2.52
833 1187 1.145803 CCACGTTCCTTCCGTCTTTC 58.854 55.000 0.00 0.00 36.17 2.62
834 1188 1.539496 CCACGTTCCTTCCGTCTTTCA 60.539 52.381 0.00 0.00 36.17 2.69
835 1189 2.206750 CACGTTCCTTCCGTCTTTCAA 58.793 47.619 0.00 0.00 36.17 2.69
836 1190 2.221055 CACGTTCCTTCCGTCTTTCAAG 59.779 50.000 0.00 0.00 36.17 3.02
877 1231 3.197766 TCATCACGGAATAAAGCACTCCT 59.802 43.478 0.00 0.00 0.00 3.69
878 1232 3.247006 TCACGGAATAAAGCACTCCTC 57.753 47.619 0.00 0.00 0.00 3.71
879 1233 2.093658 TCACGGAATAAAGCACTCCTCC 60.094 50.000 0.00 0.00 0.00 4.30
885 1239 4.202274 GGAATAAAGCACTCCTCCTCTACC 60.202 50.000 0.00 0.00 0.00 3.18
901 1255 1.701031 TACCACCACCACCACCAGTG 61.701 60.000 0.00 0.00 46.83 3.66
953 1307 0.319211 TGGTTCGCCTACACGTCAAG 60.319 55.000 0.00 0.00 38.36 3.02
989 1343 4.821589 CTCCCTCACCTTCCGCGC 62.822 72.222 0.00 0.00 0.00 6.86
1142 1496 4.824515 AGGTCTCCGCCTCTCCCG 62.825 72.222 0.00 0.00 32.39 5.14
1273 1627 3.586961 CGCCTCTGCTCGATCCGA 61.587 66.667 0.00 0.00 34.43 4.55
1320 1681 4.105553 CTGCCAGCCTGCCTGCTA 62.106 66.667 0.00 0.00 40.32 3.49
1516 1878 1.900545 GCGGGTCAAGGTAGCCTTCT 61.901 60.000 0.00 0.00 42.67 2.85
1563 1925 7.377766 TGCCTAATTTACTTTCTGATGTGTC 57.622 36.000 0.00 0.00 0.00 3.67
1565 1927 6.478588 CCTAATTTACTTTCTGATGTGTCGC 58.521 40.000 0.00 0.00 0.00 5.19
1602 1967 4.783903 GCCGTTATGCGCATTGTT 57.216 50.000 30.42 7.46 39.71 2.83
1639 2004 7.328493 GCCATGTTTGTAAGGAAATTAAGTGAC 59.672 37.037 0.00 0.00 0.00 3.67
1656 2021 0.166814 GACAAGCCAACGCATCTGAC 59.833 55.000 0.00 0.00 37.52 3.51
1720 2086 8.523915 AAAATCATGCCATGTGTAAATCTCTA 57.476 30.769 4.31 0.00 0.00 2.43
1774 2141 5.651172 TGATACTTGAACAGTTGAACACG 57.349 39.130 0.00 0.00 36.88 4.49
1786 2153 4.328983 CAGTTGAACACGTGAACACTACTT 59.671 41.667 25.01 2.52 0.00 2.24
1789 2156 4.496360 TGAACACGTGAACACTACTTTGA 58.504 39.130 25.01 0.00 0.00 2.69
1808 2175 6.757010 ACTTTGATGTTAGCGTCTCGATATTT 59.243 34.615 0.26 0.00 0.00 1.40
1809 2176 6.510746 TTGATGTTAGCGTCTCGATATTTG 57.489 37.500 0.26 0.00 0.00 2.32
1810 2177 5.827666 TGATGTTAGCGTCTCGATATTTGA 58.172 37.500 0.26 0.00 0.00 2.69
1811 2178 6.447162 TGATGTTAGCGTCTCGATATTTGAT 58.553 36.000 0.26 0.00 0.00 2.57
1812 2179 7.590279 TGATGTTAGCGTCTCGATATTTGATA 58.410 34.615 0.26 0.00 0.00 2.15
1813 2180 7.750903 TGATGTTAGCGTCTCGATATTTGATAG 59.249 37.037 0.26 0.00 0.00 2.08
1814 2181 6.967135 TGTTAGCGTCTCGATATTTGATAGT 58.033 36.000 0.00 0.00 0.00 2.12
1815 2182 8.091385 TGTTAGCGTCTCGATATTTGATAGTA 57.909 34.615 0.00 0.00 0.00 1.82
1816 2183 8.727910 TGTTAGCGTCTCGATATTTGATAGTAT 58.272 33.333 0.00 0.00 0.00 2.12
1820 2187 8.516234 AGCGTCTCGATATTTGATAGTATTTCT 58.484 33.333 0.00 0.00 0.00 2.52
1865 2232 6.039941 GCCTTCTAGCTTAGTCACAGAAGATA 59.960 42.308 17.80 0.00 43.09 1.98
1884 2251 5.509498 AGATAAAGTGGCCTTTTAGCATCA 58.491 37.500 22.00 3.64 41.18 3.07
1892 2263 3.934579 GGCCTTTTAGCATCACCATTTTG 59.065 43.478 0.00 0.00 0.00 2.44
1954 2327 7.811236 TGTAATTTACTCCAAGAGACACTAACG 59.189 37.037 7.99 0.00 33.32 3.18
2013 2388 8.359642 GGCATCATGTATTTTATTGCTCCTTTA 58.640 33.333 0.00 0.00 0.00 1.85
2063 2440 7.391833 ACTCAAATTACCCTGTTCTCTTGATTC 59.608 37.037 0.00 0.00 0.00 2.52
2147 2524 6.624021 AGGTTATATTGTTTCTCCTATGGGGT 59.376 38.462 0.00 0.00 36.25 4.95
2172 2549 1.946768 GCTGTTGCAAGGTCAGTGTTA 59.053 47.619 14.80 0.00 39.41 2.41
2183 2560 6.371548 GCAAGGTCAGTGTTACTCAATCAATA 59.628 38.462 0.00 0.00 0.00 1.90
2184 2561 7.413438 GCAAGGTCAGTGTTACTCAATCAATAG 60.413 40.741 0.00 0.00 0.00 1.73
2228 2605 4.518970 AGCTTCATGTGGTTTGTTAATCGT 59.481 37.500 0.00 0.00 0.00 3.73
2300 2678 5.934625 AGTGTTGATCTGCGAGACTTATTTT 59.065 36.000 0.00 0.00 30.65 1.82
2345 2723 2.534042 TCCTCTCCTTCTAGTGGTGG 57.466 55.000 4.87 6.23 32.93 4.61
2363 2741 4.202367 TGGTGGGTTTCTTTTTGTTGTTGT 60.202 37.500 0.00 0.00 0.00 3.32
2394 2773 6.047231 GGCATACTCAACTCTTAATAACCGT 58.953 40.000 0.00 0.00 0.00 4.83
2395 2774 6.018994 GGCATACTCAACTCTTAATAACCGTG 60.019 42.308 0.00 0.00 0.00 4.94
2402 2781 6.874664 TCAACTCTTAATAACCGTGTATGCAA 59.125 34.615 0.00 0.00 0.00 4.08
2599 2978 9.683069 ATTTATCTTGTTTGCGATATCCATTTC 57.317 29.630 0.00 0.00 0.00 2.17
2605 2984 5.239306 TGTTTGCGATATCCATTTCATCTCC 59.761 40.000 0.00 0.00 0.00 3.71
2615 2994 6.519679 TCCATTTCATCTCCTGTTTGAATG 57.480 37.500 0.00 0.00 0.00 2.67
2666 3045 8.207350 AGCCTATAAGCTTTATGGAGTATTGA 57.793 34.615 3.20 0.00 41.41 2.57
2667 3046 8.830741 AGCCTATAAGCTTTATGGAGTATTGAT 58.169 33.333 3.20 0.00 41.41 2.57
2668 3047 9.103861 GCCTATAAGCTTTATGGAGTATTGATC 57.896 37.037 3.20 0.00 0.00 2.92
2669 3048 9.606631 CCTATAAGCTTTATGGAGTATTGATCC 57.393 37.037 3.20 0.00 37.35 3.36
2679 3058 6.605471 TGGAGTATTGATCCATATAGCGTT 57.395 37.500 0.00 0.00 41.96 4.84
2680 3059 7.004555 TGGAGTATTGATCCATATAGCGTTT 57.995 36.000 0.00 0.00 41.96 3.60
2681 3060 6.873605 TGGAGTATTGATCCATATAGCGTTTG 59.126 38.462 0.00 0.00 41.96 2.93
2682 3061 6.183360 GGAGTATTGATCCATATAGCGTTTGC 60.183 42.308 0.00 0.00 37.87 3.68
2683 3062 8.272584 GGAGTATTGATCCATATAGCGTTTGCT 61.273 40.741 0.00 0.00 44.75 3.91
2693 3072 3.773117 GCGTTTGCTGCATACAGTT 57.227 47.368 20.33 0.00 46.30 3.16
2694 3073 2.050477 GCGTTTGCTGCATACAGTTT 57.950 45.000 20.33 0.00 46.30 2.66
2695 3074 2.393764 GCGTTTGCTGCATACAGTTTT 58.606 42.857 20.33 0.00 46.30 2.43
2696 3075 3.560503 GCGTTTGCTGCATACAGTTTTA 58.439 40.909 20.33 0.00 46.30 1.52
2697 3076 3.978217 GCGTTTGCTGCATACAGTTTTAA 59.022 39.130 20.33 0.00 46.30 1.52
2707 3086 7.626240 GCTGCATACAGTTTTAAGCAATGTCTA 60.626 37.037 0.00 0.00 46.30 2.59
2731 3110 2.220133 GCATATGGTTGTTACGGTAGCG 59.780 50.000 13.69 13.69 0.00 4.26
2732 3111 1.925229 TATGGTTGTTACGGTAGCGC 58.075 50.000 15.35 0.00 0.00 5.92
2736 3115 0.783579 GTTGTTACGGTAGCGCGAAA 59.216 50.000 12.10 3.70 0.00 3.46
2742 3121 4.198584 GTTACGGTAGCGCGAAATTTATG 58.801 43.478 12.10 0.00 0.00 1.90
2751 3130 2.357637 CGCGAAATTTATGGATGGTGGT 59.642 45.455 0.00 0.00 0.00 4.16
2752 3131 3.705604 GCGAAATTTATGGATGGTGGTG 58.294 45.455 0.00 0.00 0.00 4.17
2753 3132 3.130340 GCGAAATTTATGGATGGTGGTGT 59.870 43.478 0.00 0.00 0.00 4.16
2754 3133 4.381505 GCGAAATTTATGGATGGTGGTGTT 60.382 41.667 0.00 0.00 0.00 3.32
2769 3148 5.001232 GGTGGTGTTAAGCTCTCAACAATA 58.999 41.667 9.35 1.46 36.47 1.90
2773 3152 6.204688 TGGTGTTAAGCTCTCAACAATACTTG 59.795 38.462 9.35 0.00 36.47 3.16
2798 3179 9.184523 TGTAGTTCCCAGTCCATTATATTTTTG 57.815 33.333 0.00 0.00 0.00 2.44
2832 3214 9.042008 ACTATACATAACATTTCTAAGCAACCG 57.958 33.333 0.00 0.00 0.00 4.44
2848 3230 3.668656 GCAACCGTGTTTATCTTGCTTTC 59.331 43.478 0.00 0.00 35.41 2.62
2849 3231 4.226761 CAACCGTGTTTATCTTGCTTTCC 58.773 43.478 0.00 0.00 0.00 3.13
2850 3232 3.482436 ACCGTGTTTATCTTGCTTTCCA 58.518 40.909 0.00 0.00 0.00 3.53
2903 3285 1.394917 GTGTCTGGATGAACATGCGTC 59.605 52.381 0.00 0.00 31.21 5.19
2904 3286 1.001860 TGTCTGGATGAACATGCGTCA 59.998 47.619 2.40 2.40 31.21 4.35
2909 3291 1.675714 GGATGAACATGCGTCACCAGA 60.676 52.381 1.96 0.00 0.00 3.86
2910 3292 2.076100 GATGAACATGCGTCACCAGAA 58.924 47.619 1.96 0.00 0.00 3.02
2913 3295 3.872696 TGAACATGCGTCACCAGAATAT 58.127 40.909 0.00 0.00 0.00 1.28
2917 3299 6.542005 TGAACATGCGTCACCAGAATATTTAT 59.458 34.615 0.00 0.00 0.00 1.40
2918 3300 6.942532 ACATGCGTCACCAGAATATTTATT 57.057 33.333 0.00 0.00 0.00 1.40
2919 3301 7.333528 ACATGCGTCACCAGAATATTTATTT 57.666 32.000 0.00 0.00 0.00 1.40
2920 3302 7.771183 ACATGCGTCACCAGAATATTTATTTT 58.229 30.769 0.00 0.00 0.00 1.82
2921 3303 7.701924 ACATGCGTCACCAGAATATTTATTTTG 59.298 33.333 0.00 0.00 0.00 2.44
2922 3304 7.384439 TGCGTCACCAGAATATTTATTTTGA 57.616 32.000 3.18 0.00 31.54 2.69
2923 3305 7.471721 TGCGTCACCAGAATATTTATTTTGAG 58.528 34.615 3.18 0.00 31.54 3.02
2924 3306 7.335673 TGCGTCACCAGAATATTTATTTTGAGA 59.664 33.333 3.18 0.00 31.54 3.27
2925 3307 8.181573 GCGTCACCAGAATATTTATTTTGAGAA 58.818 33.333 3.18 0.00 31.54 2.87
2940 3322 7.617041 ATTTTGAGAATAGGTTAGTCTGTGC 57.383 36.000 0.00 0.00 32.60 4.57
2941 3323 4.737855 TGAGAATAGGTTAGTCTGTGCC 57.262 45.455 0.00 0.00 32.60 5.01
2942 3324 4.353777 TGAGAATAGGTTAGTCTGTGCCT 58.646 43.478 0.00 0.00 32.60 4.75
2943 3325 5.516044 TGAGAATAGGTTAGTCTGTGCCTA 58.484 41.667 0.00 0.00 37.90 3.93
2944 3326 6.136857 TGAGAATAGGTTAGTCTGTGCCTAT 58.863 40.000 0.00 0.00 43.80 2.57
2947 3329 3.268023 AGGTTAGTCTGTGCCTATTGC 57.732 47.619 0.00 0.00 41.77 3.56
2987 3369 1.962807 TGATGGGCTGGTGTTTTGAAG 59.037 47.619 0.00 0.00 0.00 3.02
3299 3681 5.533528 GGGACCTTTTGTTGTGTACATTACT 59.466 40.000 0.00 0.00 36.44 2.24
3344 3726 8.768955 GGTGCTTATCAGTTATCAGTAATCAAG 58.231 37.037 0.00 0.00 0.00 3.02
3471 3854 9.591792 TGTTGTGTTAATTGATGAATTGAAACA 57.408 25.926 1.97 1.97 34.86 2.83
3597 3986 6.570692 TCTCCTGTAATCGAATAAGTGGAAC 58.429 40.000 0.00 0.00 0.00 3.62
3739 4128 1.413077 CTTACTCCCGCTTCCCCTTAG 59.587 57.143 0.00 0.00 0.00 2.18
3740 4129 0.398098 TACTCCCGCTTCCCCTTAGG 60.398 60.000 0.00 0.00 0.00 2.69
4089 4533 6.146837 CGGAGCCAGTAAATCTGATCAAATAG 59.853 42.308 0.00 0.00 46.27 1.73
4196 4640 6.215121 TGTCAAAGGTATGCAGTCATTTTTG 58.785 36.000 0.00 0.00 34.22 2.44
4245 4691 8.216453 CAGTCATTTATTTAAAGTGTTTGCTGC 58.784 33.333 0.00 0.00 0.00 5.25
4252 4698 0.249996 AAGTGTTTGCTGCCCATTGC 60.250 50.000 0.00 0.00 41.77 3.56
4331 4878 4.721132 TCTTTCCGTCCCAAAATAAGTGT 58.279 39.130 0.00 0.00 0.00 3.55
4332 4879 4.758165 TCTTTCCGTCCCAAAATAAGTGTC 59.242 41.667 0.00 0.00 0.00 3.67
4338 4885 4.083484 CGTCCCAAAATAAGTGTCTCAACC 60.083 45.833 0.00 0.00 0.00 3.77
4341 4888 6.713450 GTCCCAAAATAAGTGTCTCAACCTTA 59.287 38.462 0.00 0.00 0.00 2.69
4342 4889 6.940298 TCCCAAAATAAGTGTCTCAACCTTAG 59.060 38.462 0.00 0.00 0.00 2.18
4343 4890 6.715264 CCCAAAATAAGTGTCTCAACCTTAGT 59.285 38.462 0.00 0.00 0.00 2.24
4345 4892 8.718734 CCAAAATAAGTGTCTCAACCTTAGTAC 58.281 37.037 0.00 0.00 0.00 2.73
4346 4893 9.268268 CAAAATAAGTGTCTCAACCTTAGTACA 57.732 33.333 0.00 0.00 0.00 2.90
4347 4894 9.841295 AAAATAAGTGTCTCAACCTTAGTACAA 57.159 29.630 0.00 0.00 0.00 2.41
4349 4896 6.481434 AAGTGTCTCAACCTTAGTACAACT 57.519 37.500 0.00 0.00 0.00 3.16
4350 4897 6.481434 AGTGTCTCAACCTTAGTACAACTT 57.519 37.500 0.00 0.00 0.00 2.66
4351 4898 6.885922 AGTGTCTCAACCTTAGTACAACTTT 58.114 36.000 0.00 0.00 0.00 2.66
4352 4899 6.761714 AGTGTCTCAACCTTAGTACAACTTTG 59.238 38.462 0.00 0.00 0.00 2.77
4353 4900 6.537660 GTGTCTCAACCTTAGTACAACTTTGT 59.462 38.462 0.00 0.00 44.86 2.83
4354 4901 7.707893 GTGTCTCAACCTTAGTACAACTTTGTA 59.292 37.037 0.00 0.00 42.35 2.41
4538 5179 7.883833 TGTAGAGAACTGTTTCTAGCTTCTAGA 59.116 37.037 0.00 0.00 42.53 2.43
4666 5308 3.637229 TCCATCGTCAGGTTAATCTCTCC 59.363 47.826 0.00 0.00 0.00 3.71
4922 5608 6.685527 ACAAAGGAGAAAACTTGTCTTCTC 57.314 37.500 7.99 7.99 44.53 2.87
4925 5611 7.340487 ACAAAGGAGAAAACTTGTCTTCTCAAT 59.660 33.333 15.84 4.33 46.24 2.57
5163 5872 1.562475 TGGATTAGCTTTTACCGCCCT 59.438 47.619 0.00 0.00 0.00 5.19
5293 6010 5.872617 TCTGTCCTTACGTATCAATTGTTGG 59.127 40.000 5.13 0.00 0.00 3.77
5294 6011 5.553123 TGTCCTTACGTATCAATTGTTGGT 58.447 37.500 5.13 3.25 0.00 3.67
5295 6012 5.998981 TGTCCTTACGTATCAATTGTTGGTT 59.001 36.000 5.13 0.00 0.00 3.67
5296 6013 6.072948 TGTCCTTACGTATCAATTGTTGGTTG 60.073 38.462 5.13 0.00 0.00 3.77
5302 6019 5.239744 ACGTATCAATTGTTGGTTGCTAACA 59.760 36.000 5.13 0.00 36.34 2.41
5408 6127 5.517904 CGTAGCTGGGTATACACTCTTAAC 58.482 45.833 6.69 0.00 0.00 2.01
5409 6128 5.066893 CGTAGCTGGGTATACACTCTTAACA 59.933 44.000 6.69 0.00 0.00 2.41
5410 6129 5.340439 AGCTGGGTATACACTCTTAACAC 57.660 43.478 6.69 0.00 0.00 3.32
5411 6130 4.775780 AGCTGGGTATACACTCTTAACACA 59.224 41.667 6.69 0.00 0.00 3.72
5441 6213 7.507829 TGGTTTTAGCTAGTACACCTTGTTAA 58.492 34.615 11.74 0.00 0.00 2.01
5515 6287 2.366916 AGGTAGCAATCTCATTCTCCGG 59.633 50.000 0.00 0.00 0.00 5.14
5536 6308 4.261801 GGTGTACATGGACATACAAGCTT 58.738 43.478 15.33 0.00 33.23 3.74
5585 6357 2.480419 ACAGTGTTTGCGATAACAGCTC 59.520 45.455 3.39 0.00 38.60 4.09
5669 6441 5.124645 TGACAGCCAAGCAAAATTTTGAAT 58.875 33.333 30.40 16.95 40.55 2.57
5733 6508 7.125811 ACTGGATTCTAACAGCCATAAAGTCTA 59.874 37.037 0.00 0.00 38.25 2.59
5761 6536 7.552687 CCCTACACTCAAAACAATCTTATAGCA 59.447 37.037 0.00 0.00 0.00 3.49
5762 6537 9.113838 CCTACACTCAAAACAATCTTATAGCAT 57.886 33.333 0.00 0.00 0.00 3.79
5768 6543 6.038161 TCAAAACAATCTTATAGCATGGTCCG 59.962 38.462 0.00 0.00 0.00 4.79
5801 6578 6.327154 TCTCTCGTAATATCTCTAGAGCTCG 58.673 44.000 15.35 11.82 32.38 5.03
5813 6590 0.393537 AGAGCTCGGAAGGCCAATTG 60.394 55.000 5.01 0.00 0.00 2.32
5834 6612 6.961359 TTGTACAAGATAGATTTCCACACG 57.039 37.500 3.59 0.00 0.00 4.49
5887 6666 6.353323 TGTAACACTCTTGAATCCAGACAAA 58.647 36.000 0.00 0.00 0.00 2.83
5935 6718 7.716799 ATGATTTGGCACCTTTACAAAGATA 57.283 32.000 3.25 0.00 37.50 1.98
5971 6754 6.589135 TGATCTGCATATCAACAATCTGAGT 58.411 36.000 12.01 0.00 32.97 3.41
6106 6889 6.076607 GCGAATCGTATTTGTTTTCTTCATCG 60.077 38.462 4.07 0.00 0.00 3.84
6113 6896 6.695292 ATTTGTTTTCTTCATCGCAATGTC 57.305 33.333 0.00 0.00 34.32 3.06
6218 7007 6.889301 ACAAGATTGATTGTCACAACTCAT 57.111 33.333 0.00 0.00 39.13 2.90
6219 7008 7.984422 ACAAGATTGATTGTCACAACTCATA 57.016 32.000 0.00 0.00 39.13 2.15
6220 7009 8.394971 ACAAGATTGATTGTCACAACTCATAA 57.605 30.769 0.00 0.00 39.13 1.90
6235 7024 6.820656 ACAACTCATAAGCAGAGTATTTCCTG 59.179 38.462 0.00 0.00 45.11 3.86
6249 7038 8.538701 AGAGTATTTCCTGCTATCAGATAATGG 58.461 37.037 0.00 0.00 42.95 3.16
6270 7059 1.202099 TGGGCCCGGATGAAGTAACA 61.202 55.000 19.37 0.00 0.00 2.41
6298 7087 4.697352 CCCATTGGAACAGTCTAGAAACAG 59.303 45.833 3.62 0.00 42.39 3.16
6311 7100 8.171840 CAGTCTAGAAACAGCTTAGTTTAATGC 58.828 37.037 2.40 0.00 41.48 3.56
6312 7101 8.097662 AGTCTAGAAACAGCTTAGTTTAATGCT 58.902 33.333 2.40 0.00 41.48 3.79
6319 7108 5.156355 CAGCTTAGTTTAATGCTTGTGGTG 58.844 41.667 0.00 0.00 33.03 4.17
6323 7112 6.074356 GCTTAGTTTAATGCTTGTGGTGTTTG 60.074 38.462 0.00 0.00 0.00 2.93
6326 7115 2.228138 AATGCTTGTGGTGTTTGCAG 57.772 45.000 0.00 0.00 37.07 4.41
6345 7134 3.386726 GCAGTCAGTGTATATACCCACCA 59.613 47.826 10.38 0.00 31.88 4.17
6348 7137 4.098960 AGTCAGTGTATATACCCACCAACG 59.901 45.833 10.38 0.00 31.88 4.10
6350 7139 3.385433 CAGTGTATATACCCACCAACGGA 59.615 47.826 10.38 0.00 31.88 4.69
6351 7140 4.039973 CAGTGTATATACCCACCAACGGAT 59.960 45.833 10.38 0.00 31.88 4.18
6352 7141 4.657039 AGTGTATATACCCACCAACGGATT 59.343 41.667 10.38 0.00 31.88 3.01
6353 7142 5.131475 AGTGTATATACCCACCAACGGATTT 59.869 40.000 10.38 0.00 31.88 2.17
6354 7143 5.824097 GTGTATATACCCACCAACGGATTTT 59.176 40.000 10.38 0.00 0.00 1.82
6355 7144 6.991531 GTGTATATACCCACCAACGGATTTTA 59.008 38.462 10.38 0.00 0.00 1.52
6356 7145 7.662669 GTGTATATACCCACCAACGGATTTTAT 59.337 37.037 10.38 0.00 0.00 1.40
6361 7150 4.020928 ACCCACCAACGGATTTTATTTTCC 60.021 41.667 0.00 0.00 0.00 3.13
6415 7205 2.460669 ACCAAAATGGAGCCCTCATTC 58.539 47.619 2.85 0.00 40.96 2.67
6416 7206 2.225343 ACCAAAATGGAGCCCTCATTCA 60.225 45.455 2.85 0.00 40.96 2.57
6438 7228 5.159273 AGGACACTGAAGGAAGATTTCTC 57.841 43.478 0.00 0.00 0.00 2.87
6459 7249 3.941483 TCCCGAGAAATGAGCTGATTTTC 59.059 43.478 12.58 10.54 0.00 2.29
6471 7261 5.007385 AGCTGATTTTCATTCTTGCCATC 57.993 39.130 0.00 0.00 0.00 3.51
6516 7312 9.981114 AGGTAAATAATTTGAACAGAAACCAAG 57.019 29.630 0.00 0.00 0.00 3.61
6518 7314 9.476202 GTAAATAATTTGAACAGAAACCAAGCT 57.524 29.630 0.00 0.00 0.00 3.74
6519 7315 8.593492 AAATAATTTGAACAGAAACCAAGCTC 57.407 30.769 0.00 0.00 0.00 4.09
6521 7317 1.593196 TGAACAGAAACCAAGCTCGG 58.407 50.000 0.00 0.00 0.00 4.63
6612 7411 8.399425 CCACAAATACACAAACACAAGTACTAA 58.601 33.333 0.00 0.00 0.00 2.24
6613 7412 9.944663 CACAAATACACAAACACAAGTACTAAT 57.055 29.630 0.00 0.00 0.00 1.73
6618 7417 9.991906 ATACACAAACACAAGTACTAATACAGT 57.008 29.630 0.00 0.00 41.62 3.55
6619 7418 8.138365 ACACAAACACAAGTACTAATACAGTG 57.862 34.615 0.00 3.43 41.59 3.66
6689 7488 2.176055 CTCGTGGTCACCGTCGAG 59.824 66.667 21.27 21.27 41.15 4.04
6768 7567 2.366972 ATCCAGAAGGTCCGGGGG 60.367 66.667 0.00 0.00 35.89 5.40
6809 7608 4.297891 ACGTGAACGCGTCGTCGA 62.298 61.111 26.90 7.63 41.71 4.20
6810 7609 3.512452 CGTGAACGCGTCGTCGAG 61.512 66.667 14.44 5.08 39.99 4.04
6811 7610 3.813688 GTGAACGCGTCGTCGAGC 61.814 66.667 14.44 0.68 39.99 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 3.124466 CACAAGCATTCGATTCCGTTGTA 59.876 43.478 0.00 0.00 31.67 2.41
61 62 0.387367 GTCGTCGATGCTCACACAGT 60.387 55.000 0.00 0.00 0.00 3.55
98 99 6.051717 GCTAGTGCTCCAAATCTTCTATCAA 58.948 40.000 0.00 0.00 36.03 2.57
101 102 5.363939 GTGCTAGTGCTCCAAATCTTCTAT 58.636 41.667 0.00 0.00 40.48 1.98
160 161 2.289002 GCTTCATAATCGAGCACCCTTG 59.711 50.000 0.00 0.00 36.45 3.61
161 162 2.565841 GCTTCATAATCGAGCACCCTT 58.434 47.619 0.00 0.00 36.45 3.95
163 164 1.230324 GGCTTCATAATCGAGCACCC 58.770 55.000 0.00 0.00 38.14 4.61
302 651 7.443879 GGCAATTTCAATTTTGAAGGGAAACTA 59.556 33.333 5.92 0.00 46.68 2.24
304 653 6.039159 TGGCAATTTCAATTTTGAAGGGAAAC 59.961 34.615 5.92 0.00 46.68 2.78
318 667 2.627699 GGACAAGAGGTGGCAATTTCAA 59.372 45.455 0.00 0.00 36.72 2.69
414 767 4.220693 TGGATCATTTGAGAATCGTGGT 57.779 40.909 0.00 0.00 38.61 4.16
473 827 3.835790 TTGGCCGGGTCAAGGAACG 62.836 63.158 10.61 0.00 0.00 3.95
552 906 8.089625 TCAGATTCTGACCATGAATTACCTTA 57.910 34.615 12.38 0.00 35.39 2.69
553 907 6.962182 TCAGATTCTGACCATGAATTACCTT 58.038 36.000 12.38 0.00 35.39 3.50
555 909 6.994496 TCATCAGATTCTGACCATGAATTACC 59.006 38.462 18.35 0.00 43.63 2.85
556 910 8.341173 GTTCATCAGATTCTGACCATGAATTAC 58.659 37.037 23.80 14.30 43.63 1.89
557 911 8.048514 TGTTCATCAGATTCTGACCATGAATTA 58.951 33.333 23.80 16.97 43.63 1.40
558 912 6.888088 TGTTCATCAGATTCTGACCATGAATT 59.112 34.615 23.80 5.68 43.63 2.17
559 913 6.420638 TGTTCATCAGATTCTGACCATGAAT 58.579 36.000 23.80 6.27 43.63 2.57
560 914 5.807909 TGTTCATCAGATTCTGACCATGAA 58.192 37.500 18.35 19.28 43.63 2.57
561 915 5.425196 TGTTCATCAGATTCTGACCATGA 57.575 39.130 18.35 14.93 43.63 3.07
562 916 6.694877 AATGTTCATCAGATTCTGACCATG 57.305 37.500 18.35 12.96 43.63 3.66
563 917 8.991783 ATAAATGTTCATCAGATTCTGACCAT 57.008 30.769 18.35 14.06 43.63 3.55
564 918 8.812513 AATAAATGTTCATCAGATTCTGACCA 57.187 30.769 18.35 12.59 43.63 4.02
610 964 9.485206 AGTACGTTAGTTTGTGATTTATCTGTT 57.515 29.630 0.00 0.00 0.00 3.16
647 1001 9.332502 ACAATGTATGTGCGTTTTAATAGGATA 57.667 29.630 0.00 0.00 41.93 2.59
648 1002 8.220755 ACAATGTATGTGCGTTTTAATAGGAT 57.779 30.769 0.00 0.00 41.93 3.24
649 1003 7.618502 ACAATGTATGTGCGTTTTAATAGGA 57.381 32.000 0.00 0.00 41.93 2.94
650 1004 8.181573 AGAACAATGTATGTGCGTTTTAATAGG 58.818 33.333 0.00 0.00 43.05 2.57
653 1007 8.726988 ACTAGAACAATGTATGTGCGTTTTAAT 58.273 29.630 0.00 0.00 43.05 1.40
654 1008 8.090250 ACTAGAACAATGTATGTGCGTTTTAA 57.910 30.769 0.00 0.00 43.05 1.52
655 1009 7.661127 ACTAGAACAATGTATGTGCGTTTTA 57.339 32.000 0.00 0.00 43.05 1.52
656 1010 6.554334 ACTAGAACAATGTATGTGCGTTTT 57.446 33.333 0.00 0.00 43.05 2.43
657 1011 6.872020 AGTACTAGAACAATGTATGTGCGTTT 59.128 34.615 0.00 0.00 43.05 3.60
658 1012 6.395629 AGTACTAGAACAATGTATGTGCGTT 58.604 36.000 0.00 0.00 43.05 4.84
659 1013 5.962433 AGTACTAGAACAATGTATGTGCGT 58.038 37.500 0.00 0.00 43.05 5.24
660 1014 8.575565 AATAGTACTAGAACAATGTATGTGCG 57.424 34.615 8.85 0.00 43.05 5.34
670 1024 9.947669 GCTCGAGATTTAATAGTACTAGAACAA 57.052 33.333 18.75 0.00 0.00 2.83
671 1025 8.281194 CGCTCGAGATTTAATAGTACTAGAACA 58.719 37.037 18.75 0.00 0.00 3.18
672 1026 8.494347 TCGCTCGAGATTTAATAGTACTAGAAC 58.506 37.037 18.75 0.00 0.00 3.01
673 1027 8.599055 TCGCTCGAGATTTAATAGTACTAGAA 57.401 34.615 18.75 2.57 0.00 2.10
674 1028 8.087136 TCTCGCTCGAGATTTAATAGTACTAGA 58.913 37.037 18.75 0.00 45.26 2.43
675 1029 8.242085 TCTCGCTCGAGATTTAATAGTACTAG 57.758 38.462 18.75 0.00 45.26 2.57
696 1050 2.726066 GCTTGGTGCGATCTTTTTCTCG 60.726 50.000 0.00 0.00 37.92 4.04
697 1051 2.226437 TGCTTGGTGCGATCTTTTTCTC 59.774 45.455 0.00 0.00 46.63 2.87
698 1052 2.030805 GTGCTTGGTGCGATCTTTTTCT 60.031 45.455 0.00 0.00 46.63 2.52
699 1053 2.319472 GTGCTTGGTGCGATCTTTTTC 58.681 47.619 0.00 0.00 46.63 2.29
700 1054 1.334960 CGTGCTTGGTGCGATCTTTTT 60.335 47.619 0.00 0.00 46.63 1.94
701 1055 0.238289 CGTGCTTGGTGCGATCTTTT 59.762 50.000 0.00 0.00 46.63 2.27
702 1056 0.884704 ACGTGCTTGGTGCGATCTTT 60.885 50.000 0.00 0.00 46.63 2.52
703 1057 1.291877 GACGTGCTTGGTGCGATCTT 61.292 55.000 0.00 0.00 46.63 2.40
704 1058 1.738099 GACGTGCTTGGTGCGATCT 60.738 57.895 0.00 0.00 46.63 2.75
705 1059 2.027073 TGACGTGCTTGGTGCGATC 61.027 57.895 0.00 0.00 46.63 3.69
706 1060 2.030412 TGACGTGCTTGGTGCGAT 59.970 55.556 0.00 0.00 46.63 4.58
707 1061 2.964925 GTGACGTGCTTGGTGCGA 60.965 61.111 0.00 0.00 46.63 5.10
708 1062 2.967076 AGTGACGTGCTTGGTGCG 60.967 61.111 0.00 0.00 46.63 5.34
709 1063 0.878523 TACAGTGACGTGCTTGGTGC 60.879 55.000 0.00 0.00 43.25 5.01
710 1064 1.526887 CTTACAGTGACGTGCTTGGTG 59.473 52.381 0.00 0.00 0.00 4.17
711 1065 1.865865 CTTACAGTGACGTGCTTGGT 58.134 50.000 0.00 0.00 0.00 3.67
712 1066 0.512952 GCTTACAGTGACGTGCTTGG 59.487 55.000 0.00 0.00 0.00 3.61
713 1067 0.161658 CGCTTACAGTGACGTGCTTG 59.838 55.000 0.00 0.00 0.00 4.01
714 1068 1.557443 GCGCTTACAGTGACGTGCTT 61.557 55.000 0.00 0.00 0.00 3.91
715 1069 2.022129 GCGCTTACAGTGACGTGCT 61.022 57.895 0.00 0.00 0.00 4.40
716 1070 2.470286 GCGCTTACAGTGACGTGC 59.530 61.111 0.00 0.00 0.00 5.34
717 1071 2.380410 GGGCGCTTACAGTGACGTG 61.380 63.158 7.64 0.00 33.61 4.49
718 1072 2.048503 GGGCGCTTACAGTGACGT 60.049 61.111 7.64 0.00 33.61 4.34
719 1073 3.179265 CGGGCGCTTACAGTGACG 61.179 66.667 7.64 0.00 33.61 4.35
720 1074 1.623973 GAACGGGCGCTTACAGTGAC 61.624 60.000 7.64 0.00 31.51 3.67
721 1075 1.373748 GAACGGGCGCTTACAGTGA 60.374 57.895 7.64 0.00 0.00 3.41
722 1076 2.726691 CGAACGGGCGCTTACAGTG 61.727 63.158 7.64 0.00 0.00 3.66
723 1077 2.431942 CGAACGGGCGCTTACAGT 60.432 61.111 7.64 0.00 0.00 3.55
735 1089 2.278336 TAGATTCCGCCGCGAACG 60.278 61.111 15.93 11.60 39.67 3.95
736 1090 0.318784 ATCTAGATTCCGCCGCGAAC 60.319 55.000 15.93 0.00 0.00 3.95
737 1091 0.039437 GATCTAGATTCCGCCGCGAA 60.039 55.000 15.93 7.22 0.00 4.70
738 1092 1.579932 GATCTAGATTCCGCCGCGA 59.420 57.895 15.93 0.00 0.00 5.87
739 1093 1.444553 GGATCTAGATTCCGCCGCG 60.445 63.158 6.70 5.59 0.00 6.46
740 1094 1.444553 CGGATCTAGATTCCGCCGC 60.445 63.158 22.23 4.31 40.25 6.53
741 1095 4.870305 CGGATCTAGATTCCGCCG 57.130 61.111 22.23 18.58 40.25 6.46
745 1099 0.966920 TTCCGGCGGATCTAGATTCC 59.033 55.000 31.59 8.65 0.00 3.01
746 1100 1.614413 ACTTCCGGCGGATCTAGATTC 59.386 52.381 31.59 3.40 0.00 2.52
747 1101 1.705873 ACTTCCGGCGGATCTAGATT 58.294 50.000 31.59 5.42 0.00 2.40
748 1102 2.161030 GTACTTCCGGCGGATCTAGAT 58.839 52.381 31.59 16.04 0.00 1.98
749 1103 1.602311 GTACTTCCGGCGGATCTAGA 58.398 55.000 31.59 13.76 0.00 2.43
750 1104 0.597072 GGTACTTCCGGCGGATCTAG 59.403 60.000 31.59 25.73 0.00 2.43
751 1105 0.106569 TGGTACTTCCGGCGGATCTA 60.107 55.000 31.59 18.49 39.52 1.98
752 1106 0.759436 ATGGTACTTCCGGCGGATCT 60.759 55.000 31.59 19.59 39.52 2.75
753 1107 0.319641 GATGGTACTTCCGGCGGATC 60.320 60.000 31.59 18.48 39.52 3.36
754 1108 1.746517 GATGGTACTTCCGGCGGAT 59.253 57.895 31.59 18.91 39.52 4.18
755 1109 2.428925 GGATGGTACTTCCGGCGGA 61.429 63.158 27.46 27.46 39.52 5.54
756 1110 2.108362 GGATGGTACTTCCGGCGG 59.892 66.667 22.51 22.51 39.52 6.13
757 1111 2.108362 GGGATGGTACTTCCGGCG 59.892 66.667 0.00 0.00 39.52 6.46
758 1112 1.705997 ATGGGGATGGTACTTCCGGC 61.706 60.000 0.00 0.00 39.52 6.13
759 1113 1.724545 TATGGGGATGGTACTTCCGG 58.275 55.000 0.00 0.00 39.52 5.14
760 1114 2.615493 GCATATGGGGATGGTACTTCCG 60.615 54.545 4.56 0.00 39.52 4.30
761 1115 2.290960 GGCATATGGGGATGGTACTTCC 60.291 54.545 4.56 6.80 0.00 3.46
762 1116 2.290960 GGGCATATGGGGATGGTACTTC 60.291 54.545 4.56 0.00 0.00 3.01
763 1117 1.710809 GGGCATATGGGGATGGTACTT 59.289 52.381 4.56 0.00 0.00 2.24
764 1118 1.132069 AGGGCATATGGGGATGGTACT 60.132 52.381 4.56 0.00 0.00 2.73
765 1119 1.372501 AGGGCATATGGGGATGGTAC 58.627 55.000 4.56 0.00 0.00 3.34
766 1120 2.157926 TGTAGGGCATATGGGGATGGTA 60.158 50.000 4.56 0.00 0.00 3.25
767 1121 1.372501 GTAGGGCATATGGGGATGGT 58.627 55.000 4.56 0.00 0.00 3.55
768 1122 1.004745 GTGTAGGGCATATGGGGATGG 59.995 57.143 4.56 0.00 0.00 3.51
769 1123 1.004745 GGTGTAGGGCATATGGGGATG 59.995 57.143 4.56 0.00 0.00 3.51
770 1124 1.372501 GGTGTAGGGCATATGGGGAT 58.627 55.000 4.56 0.00 0.00 3.85
771 1125 1.125093 CGGTGTAGGGCATATGGGGA 61.125 60.000 4.56 0.00 0.00 4.81
772 1126 1.374947 CGGTGTAGGGCATATGGGG 59.625 63.158 4.56 0.00 0.00 4.96
773 1127 1.302511 GCGGTGTAGGGCATATGGG 60.303 63.158 4.56 0.00 0.00 4.00
774 1128 0.603707 CTGCGGTGTAGGGCATATGG 60.604 60.000 4.56 0.00 38.69 2.74
775 1129 0.603707 CCTGCGGTGTAGGGCATATG 60.604 60.000 0.00 0.00 38.69 1.78
776 1130 0.762842 TCCTGCGGTGTAGGGCATAT 60.763 55.000 1.02 0.00 38.69 1.78
777 1131 1.382009 TCCTGCGGTGTAGGGCATA 60.382 57.895 1.02 0.00 38.69 3.14
778 1132 2.687200 TCCTGCGGTGTAGGGCAT 60.687 61.111 1.02 0.00 38.69 4.40
779 1133 3.702048 GTCCTGCGGTGTAGGGCA 61.702 66.667 0.42 0.00 39.77 5.36
780 1134 4.814294 CGTCCTGCGGTGTAGGGC 62.814 72.222 1.02 0.00 36.69 5.19
781 1135 4.814294 GCGTCCTGCGGTGTAGGG 62.814 72.222 1.02 0.00 41.69 3.53
797 1151 2.737376 GGAGTTGACACGTCCGGC 60.737 66.667 0.00 0.00 0.00 6.13
798 1152 2.048503 GGGAGTTGACACGTCCGG 60.049 66.667 0.00 0.00 0.00 5.14
799 1153 1.663702 GTGGGAGTTGACACGTCCG 60.664 63.158 0.00 0.00 0.00 4.79
800 1154 4.355925 GTGGGAGTTGACACGTCC 57.644 61.111 0.00 0.00 0.00 4.79
804 1158 0.106149 AGGAACGTGGGAGTTGACAC 59.894 55.000 0.00 0.00 34.00 3.67
805 1159 0.834612 AAGGAACGTGGGAGTTGACA 59.165 50.000 0.00 0.00 34.00 3.58
806 1160 1.509703 GAAGGAACGTGGGAGTTGAC 58.490 55.000 0.00 0.00 34.00 3.18
807 1161 0.395312 GGAAGGAACGTGGGAGTTGA 59.605 55.000 0.00 0.00 34.00 3.18
808 1162 0.949105 CGGAAGGAACGTGGGAGTTG 60.949 60.000 0.00 0.00 34.00 3.16
809 1163 1.370064 CGGAAGGAACGTGGGAGTT 59.630 57.895 0.00 0.00 36.99 3.01
810 1164 1.813728 GACGGAAGGAACGTGGGAGT 61.814 60.000 0.00 0.00 45.68 3.85
811 1165 1.080025 GACGGAAGGAACGTGGGAG 60.080 63.158 0.00 0.00 45.68 4.30
812 1166 1.117142 AAGACGGAAGGAACGTGGGA 61.117 55.000 0.00 0.00 45.68 4.37
813 1167 0.250166 AAAGACGGAAGGAACGTGGG 60.250 55.000 0.00 0.00 45.68 4.61
814 1168 1.145803 GAAAGACGGAAGGAACGTGG 58.854 55.000 0.00 0.00 45.68 4.94
815 1169 1.860676 TGAAAGACGGAAGGAACGTG 58.139 50.000 0.00 0.00 45.68 4.49
817 1171 1.194772 GCTTGAAAGACGGAAGGAACG 59.805 52.381 0.00 0.00 37.36 3.95
818 1172 1.535896 GGCTTGAAAGACGGAAGGAAC 59.464 52.381 0.00 0.00 0.00 3.62
819 1173 1.142060 TGGCTTGAAAGACGGAAGGAA 59.858 47.619 0.00 0.00 36.62 3.36
820 1174 0.762418 TGGCTTGAAAGACGGAAGGA 59.238 50.000 0.00 0.00 36.62 3.36
821 1175 1.604604 TTGGCTTGAAAGACGGAAGG 58.395 50.000 0.00 0.00 36.62 3.46
822 1176 2.878406 TCTTTGGCTTGAAAGACGGAAG 59.122 45.455 5.80 5.80 37.10 3.46
823 1177 2.925724 TCTTTGGCTTGAAAGACGGAA 58.074 42.857 0.00 0.00 37.10 4.30
824 1178 2.616842 GTTCTTTGGCTTGAAAGACGGA 59.383 45.455 0.00 0.00 40.80 4.69
825 1179 2.357637 TGTTCTTTGGCTTGAAAGACGG 59.642 45.455 0.00 0.00 40.80 4.79
826 1180 3.621794 CTGTTCTTTGGCTTGAAAGACG 58.378 45.455 0.00 0.00 40.80 4.18
827 1181 3.181487 TGCTGTTCTTTGGCTTGAAAGAC 60.181 43.478 0.00 0.00 40.80 3.01
828 1182 3.023119 TGCTGTTCTTTGGCTTGAAAGA 58.977 40.909 0.00 0.00 39.64 2.52
829 1183 3.441496 TGCTGTTCTTTGGCTTGAAAG 57.559 42.857 0.00 0.00 34.72 2.62
830 1184 3.056250 TGTTGCTGTTCTTTGGCTTGAAA 60.056 39.130 0.00 0.00 0.00 2.69
831 1185 2.495270 TGTTGCTGTTCTTTGGCTTGAA 59.505 40.909 0.00 0.00 0.00 2.69
832 1186 2.098614 TGTTGCTGTTCTTTGGCTTGA 58.901 42.857 0.00 0.00 0.00 3.02
833 1187 2.099592 TCTGTTGCTGTTCTTTGGCTTG 59.900 45.455 0.00 0.00 0.00 4.01
834 1188 2.378038 TCTGTTGCTGTTCTTTGGCTT 58.622 42.857 0.00 0.00 0.00 4.35
835 1189 2.057137 TCTGTTGCTGTTCTTTGGCT 57.943 45.000 0.00 0.00 0.00 4.75
836 1190 2.294233 TGATCTGTTGCTGTTCTTTGGC 59.706 45.455 0.00 0.00 0.00 4.52
877 1231 0.834687 GTGGTGGTGGTGGTAGAGGA 60.835 60.000 0.00 0.00 0.00 3.71
878 1232 1.677552 GTGGTGGTGGTGGTAGAGG 59.322 63.158 0.00 0.00 0.00 3.69
879 1233 1.125093 TGGTGGTGGTGGTGGTAGAG 61.125 60.000 0.00 0.00 0.00 2.43
885 1239 2.906897 GCACTGGTGGTGGTGGTG 60.907 66.667 2.84 0.00 45.44 4.17
901 1255 8.635877 TCTCTGAATTTTCTATCGACTTTAGC 57.364 34.615 0.00 0.00 0.00 3.09
926 1280 3.988050 TAGGCGAACCACGGGGGAT 62.988 63.158 9.50 0.00 42.83 3.85
991 1345 0.626382 GGAGAAAGGGGAGAAAGGGG 59.374 60.000 0.00 0.00 0.00 4.79
992 1346 0.626382 GGGAGAAAGGGGAGAAAGGG 59.374 60.000 0.00 0.00 0.00 3.95
993 1347 0.626382 GGGGAGAAAGGGGAGAAAGG 59.374 60.000 0.00 0.00 0.00 3.11
994 1348 1.675007 AGGGGAGAAAGGGGAGAAAG 58.325 55.000 0.00 0.00 0.00 2.62
995 1349 1.993301 GAAGGGGAGAAAGGGGAGAAA 59.007 52.381 0.00 0.00 0.00 2.52
996 1350 1.670059 GAAGGGGAGAAAGGGGAGAA 58.330 55.000 0.00 0.00 0.00 2.87
997 1351 0.253207 GGAAGGGGAGAAAGGGGAGA 60.253 60.000 0.00 0.00 0.00 3.71
998 1352 0.253394 AGGAAGGGGAGAAAGGGGAG 60.253 60.000 0.00 0.00 0.00 4.30
999 1353 1.107317 TAGGAAGGGGAGAAAGGGGA 58.893 55.000 0.00 0.00 0.00 4.81
1336 1697 0.901124 AGAACAGAATCAGCCTCGCT 59.099 50.000 0.00 0.00 40.77 4.93
1344 1705 0.035317 ACGGCAGCAGAACAGAATCA 59.965 50.000 0.00 0.00 0.00 2.57
1516 1878 2.813474 CGCCCGTCGAAATGCTGA 60.813 61.111 0.00 0.00 41.67 4.26
1542 1904 7.060600 TGCGACACATCAGAAAGTAAATTAG 57.939 36.000 0.00 0.00 0.00 1.73
1565 1927 4.671549 CCGCACGCAGCACACTTG 62.672 66.667 0.00 0.00 46.13 3.16
1639 2004 1.133253 CGTCAGATGCGTTGGCTTG 59.867 57.895 0.00 0.00 40.82 4.01
1666 2031 7.328982 TCACTATTACAAAGTTTACGCAATCGA 59.671 33.333 0.00 0.00 39.41 3.59
1667 2032 7.421613 GTCACTATTACAAAGTTTACGCAATCG 59.578 37.037 0.00 0.00 42.43 3.34
1668 2033 8.225107 TGTCACTATTACAAAGTTTACGCAATC 58.775 33.333 0.00 0.00 0.00 2.67
1720 2086 7.439108 AAACAAAGGCATATCCTAGAGTAGT 57.561 36.000 0.00 0.00 46.94 2.73
1746 2112 7.445096 TGTTCAACTGTTCAAGTATCATCATGT 59.555 33.333 0.00 0.00 38.56 3.21
1748 2114 7.360353 CGTGTTCAACTGTTCAAGTATCATCAT 60.360 37.037 0.00 0.00 38.56 2.45
1749 2115 6.073819 CGTGTTCAACTGTTCAAGTATCATCA 60.074 38.462 0.00 0.00 38.56 3.07
1750 2116 6.073765 ACGTGTTCAACTGTTCAAGTATCATC 60.074 38.462 0.00 0.00 38.56 2.92
1767 2134 4.496360 TCAAAGTAGTGTTCACGTGTTCA 58.504 39.130 16.51 12.82 0.00 3.18
1774 2141 5.176958 ACGCTAACATCAAAGTAGTGTTCAC 59.823 40.000 0.00 0.00 37.30 3.18
1786 2153 6.270064 TCAAATATCGAGACGCTAACATCAA 58.730 36.000 0.00 0.00 0.00 2.57
1789 2156 7.594714 ACTATCAAATATCGAGACGCTAACAT 58.405 34.615 0.00 0.00 0.00 2.71
1811 2178 9.916360 TTCCTAGACATGTACTGAGAAATACTA 57.084 33.333 0.00 0.00 0.00 1.82
1812 2179 8.824756 TTCCTAGACATGTACTGAGAAATACT 57.175 34.615 0.00 0.00 0.00 2.12
1813 2180 9.871238 TTTTCCTAGACATGTACTGAGAAATAC 57.129 33.333 0.00 0.00 0.00 1.89
1815 2182 7.550906 GCTTTTCCTAGACATGTACTGAGAAAT 59.449 37.037 0.00 0.00 0.00 2.17
1816 2183 6.874134 GCTTTTCCTAGACATGTACTGAGAAA 59.126 38.462 0.00 8.80 0.00 2.52
1820 2187 4.777896 AGGCTTTTCCTAGACATGTACTGA 59.222 41.667 0.00 0.00 45.41 3.41
1884 2251 1.615392 GCAGCTCCAACTCAAAATGGT 59.385 47.619 0.00 0.00 37.94 3.55
1936 2309 5.979288 AATACGTTAGTGTCTCTTGGAGT 57.021 39.130 0.00 0.00 0.00 3.85
2013 2388 8.161425 AGTACAATTGGTTAGTGGTTACAGAAT 58.839 33.333 10.83 0.00 0.00 2.40
2063 2440 4.620589 AATGTAGATCAGGCAGATGAGG 57.379 45.455 0.00 0.00 37.00 3.86
2147 2524 1.134753 CTGACCTTGCAACAGCACAAA 59.865 47.619 0.00 0.00 38.15 2.83
2183 2560 6.149474 AGCTGAATTCGTACATTACAAAAGCT 59.851 34.615 0.04 1.86 0.00 3.74
2184 2561 6.314784 AGCTGAATTCGTACATTACAAAAGC 58.685 36.000 0.04 0.00 0.00 3.51
2198 2575 3.837213 AACCACATGAAGCTGAATTCG 57.163 42.857 0.00 0.00 31.52 3.34
2228 2605 4.019792 TCTGCAGTTCCAAGAGCATAAA 57.980 40.909 14.67 0.00 36.28 1.40
2332 2710 3.790089 AAGAAACCCACCACTAGAAGG 57.210 47.619 0.00 0.00 0.00 3.46
2338 2716 3.580895 ACAACAAAAAGAAACCCACCACT 59.419 39.130 0.00 0.00 0.00 4.00
2345 2723 7.412455 CCACATGTACAACAACAAAAAGAAACC 60.412 37.037 0.00 0.00 32.02 3.27
2363 2741 5.420725 AAGAGTTGAGTATGCCACATGTA 57.579 39.130 0.00 0.00 0.00 2.29
2407 2786 5.188434 AGCACAGTTACATGCATGACTAAT 58.812 37.500 32.75 14.50 44.59 1.73
2411 2790 3.837213 AAGCACAGTTACATGCATGAC 57.163 42.857 32.75 20.65 44.59 3.06
2424 2803 4.836125 ACAATAGGAACACAAAGCACAG 57.164 40.909 0.00 0.00 0.00 3.66
2599 2978 6.529125 GTGTAAATGCATTCAAACAGGAGATG 59.471 38.462 13.38 0.00 0.00 2.90
2605 2984 6.207928 TGTCAGTGTAAATGCATTCAAACAG 58.792 36.000 13.38 0.02 0.00 3.16
2615 2994 4.023707 GGATAGGCATGTCAGTGTAAATGC 60.024 45.833 14.84 14.84 43.71 3.56
2666 3045 2.849942 TGCAGCAAACGCTATATGGAT 58.150 42.857 0.00 0.00 37.77 3.41
2667 3046 2.323968 TGCAGCAAACGCTATATGGA 57.676 45.000 0.00 0.00 37.77 3.41
2668 3047 3.498018 TGTATGCAGCAAACGCTATATGG 59.502 43.478 0.00 0.00 37.77 2.74
2669 3048 4.212004 ACTGTATGCAGCAAACGCTATATG 59.788 41.667 11.09 0.00 46.30 1.78
2670 3049 4.380531 ACTGTATGCAGCAAACGCTATAT 58.619 39.130 11.09 0.00 46.30 0.86
2671 3050 3.792401 ACTGTATGCAGCAAACGCTATA 58.208 40.909 11.09 0.00 46.30 1.31
2672 3051 2.632377 ACTGTATGCAGCAAACGCTAT 58.368 42.857 11.09 0.00 46.30 2.97
2673 3052 2.093306 ACTGTATGCAGCAAACGCTA 57.907 45.000 11.09 0.00 46.30 4.26
2674 3053 1.238439 AACTGTATGCAGCAAACGCT 58.762 45.000 11.09 0.00 46.30 5.07
2675 3054 2.050477 AAACTGTATGCAGCAAACGC 57.950 45.000 11.09 0.00 46.30 4.84
2676 3055 4.088496 GCTTAAAACTGTATGCAGCAAACG 59.912 41.667 11.09 0.00 46.30 3.60
2677 3056 4.981674 TGCTTAAAACTGTATGCAGCAAAC 59.018 37.500 11.09 0.00 46.30 2.93
2678 3057 5.193663 TGCTTAAAACTGTATGCAGCAAA 57.806 34.783 11.09 0.00 46.30 3.68
2679 3058 4.844998 TGCTTAAAACTGTATGCAGCAA 57.155 36.364 11.09 0.00 46.30 3.91
2680 3059 4.844998 TTGCTTAAAACTGTATGCAGCA 57.155 36.364 11.09 0.00 46.30 4.41
2681 3060 5.163513 ACATTGCTTAAAACTGTATGCAGC 58.836 37.500 11.09 0.00 46.30 5.25
2683 3062 6.573664 AGACATTGCTTAAAACTGTATGCA 57.426 33.333 0.00 0.00 33.65 3.96
2684 3063 6.682863 CGTAGACATTGCTTAAAACTGTATGC 59.317 38.462 0.00 0.00 0.00 3.14
2685 3064 7.180079 CCGTAGACATTGCTTAAAACTGTATG 58.820 38.462 0.00 0.00 0.00 2.39
2686 3065 6.183360 GCCGTAGACATTGCTTAAAACTGTAT 60.183 38.462 0.00 0.00 0.00 2.29
2687 3066 5.121142 GCCGTAGACATTGCTTAAAACTGTA 59.879 40.000 0.00 0.00 0.00 2.74
2688 3067 4.083484 GCCGTAGACATTGCTTAAAACTGT 60.083 41.667 0.00 0.00 0.00 3.55
2689 3068 4.083537 TGCCGTAGACATTGCTTAAAACTG 60.084 41.667 0.00 0.00 0.00 3.16
2690 3069 4.069304 TGCCGTAGACATTGCTTAAAACT 58.931 39.130 0.00 0.00 0.00 2.66
2691 3070 4.413495 TGCCGTAGACATTGCTTAAAAC 57.587 40.909 0.00 0.00 0.00 2.43
2692 3071 6.238621 CCATATGCCGTAGACATTGCTTAAAA 60.239 38.462 0.00 0.00 0.00 1.52
2693 3072 5.238432 CCATATGCCGTAGACATTGCTTAAA 59.762 40.000 0.00 0.00 0.00 1.52
2694 3073 4.754618 CCATATGCCGTAGACATTGCTTAA 59.245 41.667 0.00 0.00 0.00 1.85
2695 3074 4.202315 ACCATATGCCGTAGACATTGCTTA 60.202 41.667 0.00 0.00 0.00 3.09
2696 3075 3.141398 CCATATGCCGTAGACATTGCTT 58.859 45.455 0.00 0.00 0.00 3.91
2697 3076 2.104792 ACCATATGCCGTAGACATTGCT 59.895 45.455 0.00 0.00 0.00 3.91
2707 3086 1.065998 ACCGTAACAACCATATGCCGT 60.066 47.619 0.00 0.00 0.00 5.68
2731 3110 3.130340 ACACCACCATCCATAAATTTCGC 59.870 43.478 0.00 0.00 0.00 4.70
2732 3111 4.981806 ACACCACCATCCATAAATTTCG 57.018 40.909 0.00 0.00 0.00 3.46
2736 3115 5.518865 AGCTTAACACCACCATCCATAAAT 58.481 37.500 0.00 0.00 0.00 1.40
2742 3121 2.027192 TGAGAGCTTAACACCACCATCC 60.027 50.000 0.00 0.00 0.00 3.51
2769 3148 7.691993 ATATAATGGACTGGGAACTACAAGT 57.308 36.000 0.00 0.00 0.00 3.16
2773 3152 9.185680 ACAAAAATATAATGGACTGGGAACTAC 57.814 33.333 0.00 0.00 0.00 2.73
2809 3190 7.335924 ACACGGTTGCTTAGAAATGTTATGTAT 59.664 33.333 0.00 0.00 0.00 2.29
2832 3214 8.082242 ACTTACATTGGAAAGCAAGATAAACAC 58.918 33.333 0.00 0.00 0.00 3.32
2917 3299 5.938125 GGCACAGACTAACCTATTCTCAAAA 59.062 40.000 0.00 0.00 0.00 2.44
2918 3300 5.248477 AGGCACAGACTAACCTATTCTCAAA 59.752 40.000 0.00 0.00 0.00 2.69
2919 3301 4.777896 AGGCACAGACTAACCTATTCTCAA 59.222 41.667 0.00 0.00 0.00 3.02
2920 3302 4.353777 AGGCACAGACTAACCTATTCTCA 58.646 43.478 0.00 0.00 0.00 3.27
2921 3303 6.658188 ATAGGCACAGACTAACCTATTCTC 57.342 41.667 0.00 0.00 41.67 2.87
2925 3307 4.962155 GCAATAGGCACAGACTAACCTAT 58.038 43.478 0.00 0.00 45.36 2.57
2926 3308 4.402056 GCAATAGGCACAGACTAACCTA 57.598 45.455 0.00 0.00 43.97 3.08
2927 3309 3.268023 GCAATAGGCACAGACTAACCT 57.732 47.619 0.00 0.00 43.97 3.50
2949 3331 6.037098 CCCATCAGTACTCGACTTTAGAAAG 58.963 44.000 0.00 0.37 41.73 2.62
2956 3338 1.478510 CAGCCCATCAGTACTCGACTT 59.521 52.381 0.00 0.00 35.64 3.01
2987 3369 6.796426 ACAGTTTAAAGAAAAGAGAGCCAAC 58.204 36.000 0.00 0.00 0.00 3.77
3071 3453 9.712305 AGAATAATATGCCAGAGTACATGTAAC 57.288 33.333 7.25 5.23 0.00 2.50
3299 3681 4.647611 CACCACCACAAGTATAACCAAGA 58.352 43.478 0.00 0.00 0.00 3.02
3344 3726 5.223449 TCTGGGGATATTTATGTCCGAAC 57.777 43.478 0.21 0.00 38.80 3.95
3418 3800 5.982516 GTCAGAGATACACAATGAGACATCC 59.017 44.000 0.00 0.00 0.00 3.51
3739 4128 9.382275 AGAATAAATTGCATGGTTTATTGTTCC 57.618 29.630 20.46 11.59 39.38 3.62
3750 4141 7.082602 GCATCAGAGTAGAATAAATTGCATGG 58.917 38.462 0.00 0.00 0.00 3.66
3835 4227 6.994496 TCATCAGAAGGATAGCATACAAAAGG 59.006 38.462 0.00 0.00 33.95 3.11
3963 4355 9.686683 AAGCAAAACCTATCTAACATTACTGAT 57.313 29.630 0.00 0.00 0.00 2.90
4196 4640 4.982295 GCAAACTGTCTCCAATTGTTTACC 59.018 41.667 4.43 0.00 30.89 2.85
4245 4691 9.705290 AGTAATTAGTTAAAACAAAGCAATGGG 57.295 29.630 0.00 0.00 0.00 4.00
4297 4743 5.221884 TGGGACGGAAAGAGTATTAAACCAA 60.222 40.000 0.00 0.00 0.00 3.67
4299 4745 4.835678 TGGGACGGAAAGAGTATTAAACC 58.164 43.478 0.00 0.00 0.00 3.27
4306 4752 5.935789 CACTTATTTTGGGACGGAAAGAGTA 59.064 40.000 0.00 0.00 0.00 2.59
4310 4857 4.760204 AGACACTTATTTTGGGACGGAAAG 59.240 41.667 0.00 0.00 0.00 2.62
4311 4858 4.721132 AGACACTTATTTTGGGACGGAAA 58.279 39.130 0.00 0.00 0.00 3.13
4312 4859 4.202377 TGAGACACTTATTTTGGGACGGAA 60.202 41.667 0.00 0.00 0.00 4.30
4317 4864 5.319043 AGGTTGAGACACTTATTTTGGGA 57.681 39.130 0.00 0.00 0.00 4.37
4318 4865 6.715264 ACTAAGGTTGAGACACTTATTTTGGG 59.285 38.462 0.00 0.00 0.00 4.12
4367 4914 7.910162 CGTCCCAAAATAAGTGTCTCAATTATG 59.090 37.037 3.81 0.00 35.33 1.90
4368 4915 7.067008 CCGTCCCAAAATAAGTGTCTCAATTAT 59.933 37.037 0.00 0.00 36.41 1.28
4369 4916 6.373216 CCGTCCCAAAATAAGTGTCTCAATTA 59.627 38.462 0.00 0.00 0.00 1.40
4370 4917 5.183140 CCGTCCCAAAATAAGTGTCTCAATT 59.817 40.000 0.00 0.00 0.00 2.32
4371 4918 4.700213 CCGTCCCAAAATAAGTGTCTCAAT 59.300 41.667 0.00 0.00 0.00 2.57
4372 4919 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
4373 4920 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
4375 4922 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
4376 4923 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
4378 4925 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
4379 4926 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
4380 4927 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
4389 5030 2.361643 AGTACATACTCCCTCCGTCC 57.638 55.000 0.00 0.00 0.00 4.79
4390 5031 8.977267 ATAATATAGTACATACTCCCTCCGTC 57.023 38.462 0.00 0.00 37.73 4.79
4666 5308 4.990543 TGTGCATAGAACAAGAGAAACG 57.009 40.909 0.00 0.00 0.00 3.60
4925 5611 9.567776 CTGTAATATGGTGGTGATTAAATACCA 57.432 33.333 9.44 9.44 44.31 3.25
4934 5620 6.747414 TTAGAGCTGTAATATGGTGGTGAT 57.253 37.500 0.00 0.00 0.00 3.06
4986 5691 8.660373 CAAGCTACAACTTGTTCTATTTCTAGG 58.340 37.037 0.00 0.00 41.74 3.02
5163 5872 3.788227 ACACTGGAAATAAGCCACAGA 57.212 42.857 0.00 0.00 33.57 3.41
5295 6012 8.883731 GCAATTATAGAGAAAGTCTTGTTAGCA 58.116 33.333 0.00 0.00 36.64 3.49
5296 6013 8.883731 TGCAATTATAGAGAAAGTCTTGTTAGC 58.116 33.333 0.00 0.00 36.64 3.09
5302 6019 8.517062 AATGCTGCAATTATAGAGAAAGTCTT 57.483 30.769 6.36 0.00 36.64 3.01
5408 6127 7.011109 GGTGTACTAGCTAAAACCATGTATGTG 59.989 40.741 0.48 0.00 0.00 3.21
5409 6128 7.046033 GGTGTACTAGCTAAAACCATGTATGT 58.954 38.462 0.48 0.00 0.00 2.29
5410 6129 7.272978 AGGTGTACTAGCTAAAACCATGTATG 58.727 38.462 7.41 0.00 34.81 2.39
5411 6130 7.433537 AGGTGTACTAGCTAAAACCATGTAT 57.566 36.000 7.41 0.00 34.81 2.29
5460 6232 9.632638 AATAAAATACCTGTAGAGCAATCATGT 57.367 29.630 0.00 0.00 0.00 3.21
5515 6287 5.445939 CGAAAGCTTGTATGTCCATGTACAC 60.446 44.000 0.00 0.00 31.05 2.90
5536 6308 4.751093 TGCCGAAGATGCGCCGAA 62.751 61.111 4.18 0.00 0.00 4.30
5585 6357 0.609131 AACCGCCTCACCATTTCCAG 60.609 55.000 0.00 0.00 0.00 3.86
5669 6441 3.851458 AGGCAGCATATCAGATGACAA 57.149 42.857 0.00 0.00 34.74 3.18
5733 6508 9.449719 CTATAAGATTGTTTTGAGTGTAGGGTT 57.550 33.333 0.00 0.00 0.00 4.11
5761 6536 2.959707 GAGAGAACCTCATACGGACCAT 59.040 50.000 0.00 0.00 41.58 3.55
5762 6537 2.376109 GAGAGAACCTCATACGGACCA 58.624 52.381 0.00 0.00 41.58 4.02
5768 6543 8.556213 AGAGATATTACGAGAGAACCTCATAC 57.444 38.462 0.00 0.00 42.06 2.39
5801 6578 5.437060 TCTATCTTGTACAATTGGCCTTCC 58.563 41.667 9.13 0.00 0.00 3.46
5813 6590 7.591006 TTTCGTGTGGAAATCTATCTTGTAC 57.409 36.000 0.00 0.00 39.67 2.90
5834 6612 4.209703 CACATGTGCCAACAACTTCATTTC 59.790 41.667 13.94 0.00 40.46 2.17
5860 6639 7.851228 TGTCTGGATTCAAGAGTGTTACATAT 58.149 34.615 0.00 0.00 0.00 1.78
5908 6687 7.957002 TCTTTGTAAAGGTGCCAAATCATAAA 58.043 30.769 4.67 0.00 36.67 1.40
5935 6718 3.555527 TGCAGATCAGCTAAGCAGATT 57.444 42.857 11.68 0.00 35.03 2.40
5971 6754 8.203485 ACAGAAACAAAAGGATAAAGCATCAAA 58.797 29.630 0.00 0.00 35.11 2.69
6075 6858 2.639065 ACAAATACGATTCGCACCCAT 58.361 42.857 5.86 0.00 0.00 4.00
6086 6869 5.599359 TGCGATGAAGAAAACAAATACGA 57.401 34.783 0.00 0.00 0.00 3.43
6087 6870 6.305399 ACATTGCGATGAAGAAAACAAATACG 59.695 34.615 21.12 0.00 36.73 3.06
6106 6889 2.933769 GTGCAACTTACCAGACATTGC 58.066 47.619 0.00 0.00 44.66 3.56
6235 7024 2.363683 GCCCAGCCATTATCTGATAGC 58.636 52.381 0.00 0.00 33.54 2.97
6249 7038 2.265467 TTACTTCATCCGGGCCCAGC 62.265 60.000 24.92 0.00 0.00 4.85
6259 7048 6.177610 TCCAATGGGTAACTGTTACTTCATC 58.822 40.000 25.04 11.57 36.39 2.92
6270 7059 5.091552 TCTAGACTGTTCCAATGGGTAACT 58.908 41.667 0.00 0.00 34.93 2.24
6298 7087 5.121221 ACACCACAAGCATTAAACTAAGC 57.879 39.130 0.00 0.00 0.00 3.09
6311 7100 1.745087 ACTGACTGCAAACACCACAAG 59.255 47.619 0.00 0.00 0.00 3.16
6312 7101 1.472082 CACTGACTGCAAACACCACAA 59.528 47.619 0.00 0.00 0.00 3.33
6319 7108 5.293569 GTGGGTATATACACTGACTGCAAAC 59.706 44.000 16.00 0.00 34.84 2.93
6323 7112 3.386726 TGGTGGGTATATACACTGACTGC 59.613 47.826 16.00 0.00 37.72 4.40
6326 7115 4.365723 CGTTGGTGGGTATATACACTGAC 58.634 47.826 16.00 6.84 37.72 3.51
6345 7134 7.892609 ACTTGCTTAGGAAAATAAAATCCGTT 58.107 30.769 0.00 0.00 40.78 4.44
6348 7137 7.602265 TGCAACTTGCTTAGGAAAATAAAATCC 59.398 33.333 14.78 0.00 45.31 3.01
6350 7139 8.773645 GTTGCAACTTGCTTAGGAAAATAAAAT 58.226 29.630 22.36 0.00 45.31 1.82
6351 7140 7.984617 AGTTGCAACTTGCTTAGGAAAATAAAA 59.015 29.630 26.36 0.00 45.31 1.52
6352 7141 7.496747 AGTTGCAACTTGCTTAGGAAAATAAA 58.503 30.769 26.36 0.00 45.31 1.40
6353 7142 7.049799 AGTTGCAACTTGCTTAGGAAAATAA 57.950 32.000 26.36 0.00 45.31 1.40
6354 7143 6.648879 AGTTGCAACTTGCTTAGGAAAATA 57.351 33.333 26.36 0.00 45.31 1.40
6355 7144 5.535753 AGTTGCAACTTGCTTAGGAAAAT 57.464 34.783 26.36 0.00 45.31 1.82
6356 7145 5.337578 AAGTTGCAACTTGCTTAGGAAAA 57.662 34.783 37.28 0.00 46.80 2.29
6415 7205 4.904241 AGAAATCTTCCTTCAGTGTCCTG 58.096 43.478 0.00 0.00 40.25 3.86
6416 7206 4.019771 GGAGAAATCTTCCTTCAGTGTCCT 60.020 45.833 0.00 0.00 0.00 3.85
6422 7212 3.449018 TCTCGGGAGAAATCTTCCTTCAG 59.551 47.826 6.20 0.15 39.61 3.02
6423 7213 3.441101 TCTCGGGAGAAATCTTCCTTCA 58.559 45.455 6.20 0.00 39.61 3.02
6438 7228 3.691118 TGAAAATCAGCTCATTTCTCGGG 59.309 43.478 0.00 0.00 34.84 5.14
6459 7249 2.163010 GTCAGGTGTGATGGCAAGAATG 59.837 50.000 0.00 0.00 34.36 2.67
6513 7309 2.083774 TGCAAGGAATAACCGAGCTTG 58.916 47.619 0.00 0.00 44.74 4.01
6516 7312 1.604278 GGATGCAAGGAATAACCGAGC 59.396 52.381 0.00 0.00 44.74 5.03
6518 7314 3.213506 CATGGATGCAAGGAATAACCGA 58.786 45.455 0.00 0.00 44.74 4.69
6519 7315 3.631145 CATGGATGCAAGGAATAACCG 57.369 47.619 0.00 0.00 44.74 4.44
6562 7358 8.996655 TGGTAGAGTAGGAGTACTAGTAATTCA 58.003 37.037 11.11 0.00 39.78 2.57
6563 7359 9.271828 GTGGTAGAGTAGGAGTACTAGTAATTC 57.728 40.741 3.61 1.72 39.78 2.17
6564 7360 8.776119 TGTGGTAGAGTAGGAGTACTAGTAATT 58.224 37.037 3.61 0.00 39.78 1.40
6566 7362 7.739995 TGTGGTAGAGTAGGAGTACTAGTAA 57.260 40.000 3.61 0.00 39.78 2.24
6568 7364 6.633325 TTGTGGTAGAGTAGGAGTACTAGT 57.367 41.667 0.00 0.00 39.78 2.57
6569 7365 9.054922 GTATTTGTGGTAGAGTAGGAGTACTAG 57.945 40.741 0.00 0.00 39.78 2.57
6615 7414 8.131100 CCCATGCTTTTCTTTATATGTACACTG 58.869 37.037 0.00 0.00 0.00 3.66
6617 7416 8.129211 GTCCCATGCTTTTCTTTATATGTACAC 58.871 37.037 0.00 0.00 0.00 2.90
6618 7417 7.831690 TGTCCCATGCTTTTCTTTATATGTACA 59.168 33.333 0.00 0.00 0.00 2.90
6619 7418 8.129211 GTGTCCCATGCTTTTCTTTATATGTAC 58.871 37.037 0.00 0.00 0.00 2.90
6700 7499 3.310307 TGTACCGCTGCTGCCTCA 61.310 61.111 10.24 1.77 35.36 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.