Multiple sequence alignment - TraesCS5A01G058400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G058400 chr5A 100.000 6637 0 0 1 6637 57361624 57368260 0.000000e+00 12257.0
1 TraesCS5A01G058400 chr5A 98.473 131 2 0 3120 3250 57364613 57364743 1.440000e-56 231.0
2 TraesCS5A01G058400 chr5A 98.473 131 2 0 2990 3120 57364743 57364873 1.440000e-56 231.0
3 TraesCS5A01G058400 chr5A 89.103 156 15 2 1936 2090 57363520 57363674 6.790000e-45 193.0
4 TraesCS5A01G058400 chr5A 89.103 156 15 2 1897 2051 57363559 57363713 6.790000e-45 193.0
5 TraesCS5A01G058400 chr5B 90.798 3271 202 44 3121 6341 64255276 64258497 0.000000e+00 4281.0
6 TraesCS5A01G058400 chr5B 92.870 1655 79 17 418 2051 64252812 64254448 0.000000e+00 2366.0
7 TraesCS5A01G058400 chr5B 90.164 549 40 6 2573 3120 64254870 64255405 0.000000e+00 702.0
8 TraesCS5A01G058400 chr5B 85.832 607 49 15 1936 2531 64254294 64254874 1.580000e-170 610.0
9 TraesCS5A01G058400 chr5B 88.608 79 8 1 2012 2090 64254294 64254371 1.970000e-15 95.3
10 TraesCS5A01G058400 chr5D 90.459 2547 185 38 3124 5649 66767716 66765207 0.000000e+00 3304.0
11 TraesCS5A01G058400 chr5D 93.095 1651 77 20 418 2051 66770175 66768545 0.000000e+00 2383.0
12 TraesCS5A01G058400 chr5D 88.609 755 31 15 5641 6368 66765024 66764298 0.000000e+00 867.0
13 TraesCS5A01G058400 chr5D 90.037 542 42 4 2579 3120 66768119 66767590 0.000000e+00 691.0
14 TraesCS5A01G058400 chr5D 85.502 607 49 18 1936 2531 66768699 66768121 1.230000e-166 597.0
15 TraesCS5A01G058400 chr5D 94.545 220 9 1 6418 6637 66764295 66764079 2.970000e-88 337.0
16 TraesCS5A01G058400 chr5D 100.000 52 0 0 6367 6418 6271121 6271070 5.480000e-16 97.1
17 TraesCS5A01G058400 chr5D 100.000 52 0 0 6367 6418 503296760 503296811 5.480000e-16 97.1
18 TraesCS5A01G058400 chr5D 100.000 52 0 0 6367 6418 512414128 512414179 5.480000e-16 97.1
19 TraesCS5A01G058400 chr4D 89.781 548 44 4 2573 3120 55363731 55364266 0.000000e+00 691.0
20 TraesCS5A01G058400 chr4D 83.798 574 51 19 1971 2531 55363191 55363735 2.140000e-139 507.0
21 TraesCS5A01G058400 chr3B 100.000 52 0 0 6367 6418 796326155 796326104 5.480000e-16 97.1
22 TraesCS5A01G058400 chr3B 100.000 52 0 0 6367 6418 796326663 796326612 5.480000e-16 97.1
23 TraesCS5A01G058400 chr3B 100.000 52 0 0 6367 6418 796326825 796326876 5.480000e-16 97.1
24 TraesCS5A01G058400 chr3B 76.531 98 23 0 5034 5131 437227683 437227586 3.000000e-03 54.7
25 TraesCS5A01G058400 chr1D 100.000 52 0 0 6367 6418 51867073 51867022 5.480000e-16 97.1
26 TraesCS5A01G058400 chr1D 100.000 52 0 0 6367 6418 254439894 254439945 5.480000e-16 97.1
27 TraesCS5A01G058400 chr1D 100.000 52 0 0 6367 6418 491423536 491423485 5.480000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G058400 chr5A 57361624 57368260 6636 False 12257.000000 12257 100.0000 1 6637 1 chr5A.!!$F1 6636
1 TraesCS5A01G058400 chr5A 57363520 57364873 1353 False 212.000000 231 93.7880 1897 3250 4 chr5A.!!$F2 1353
2 TraesCS5A01G058400 chr5B 64252812 64258497 5685 False 1610.860000 4281 89.6544 418 6341 5 chr5B.!!$F1 5923
3 TraesCS5A01G058400 chr5D 66764079 66770175 6096 True 1363.166667 3304 90.3745 418 6637 6 chr5D.!!$R2 6219
4 TraesCS5A01G058400 chr4D 55363191 55364266 1075 False 599.000000 691 86.7895 1971 3120 2 chr4D.!!$F1 1149

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
331 332 0.033504 ACATCACCAGTGACGTCCAC 59.966 55.000 14.12 11.25 43.11 4.02 F
366 367 0.110295 ACACAGCCAACATGCCAGTA 59.890 50.000 0.00 0.00 0.00 2.74 F
402 403 0.321298 CGTAATATCTTGCCCCGGGG 60.321 60.000 37.09 37.09 38.57 5.73 F
973 991 0.551131 ATCCATCCCATCCTAGCCCC 60.551 60.000 0.00 0.00 0.00 5.80 F
1701 1726 1.080366 CGAAATGGGACGACGGACA 60.080 57.895 0.00 0.00 0.00 4.02 F
3802 3845 2.106338 TCAGGAATTGTGCTGGACTGAA 59.894 45.455 0.00 0.00 43.13 3.02 F
4968 5027 0.250640 CAACTTGTGCCTGAGCTCCT 60.251 55.000 12.15 0.00 40.80 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1812 1837 0.037697 CGATCAAGGGTCCACAACGA 60.038 55.000 0.00 0.00 0.00 3.85 R
1867 1897 8.195436 TCTACCATGTCTAAATACCTTTCTTCG 58.805 37.037 0.00 0.00 0.00 3.79 R
1880 1910 8.944138 TCCATTTCCAATATCTACCATGTCTAA 58.056 33.333 0.00 0.00 0.00 2.10 R
3302 3345 6.159988 TCCCTGTTTAAACAAACAAGTGTTG 58.840 36.000 20.89 6.26 40.86 3.33 R
3872 3915 0.388134 GCAAGGACAGCATGCACAAG 60.388 55.000 21.98 9.13 42.53 3.16 R
5569 5631 0.034089 GAACCAAGGGTGCTAGGCAT 60.034 55.000 0.00 0.00 41.91 4.40 R
6595 6890 0.179059 TCACTTTGCTTCTCACGGCA 60.179 50.000 0.00 0.00 36.62 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.009301 CAACAAAGACCTAGACGTCGT 57.991 47.619 10.46 0.00 37.85 4.34
21 22 2.978489 CAACAAAGACCTAGACGTCGTC 59.022 50.000 17.70 17.70 37.85 4.20
22 23 1.196354 ACAAAGACCTAGACGTCGTCG 59.804 52.381 19.11 8.33 37.67 5.12
36 37 3.704008 CGTCGTCGTTGCTTTAGTAAAC 58.296 45.455 0.00 0.00 0.00 2.01
37 38 3.180189 CGTCGTCGTTGCTTTAGTAAACA 59.820 43.478 0.00 0.00 0.00 2.83
38 39 4.440068 GTCGTCGTTGCTTTAGTAAACAC 58.560 43.478 0.00 0.00 0.00 3.32
39 40 3.490526 TCGTCGTTGCTTTAGTAAACACC 59.509 43.478 0.00 0.00 0.00 4.16
40 41 3.245754 CGTCGTTGCTTTAGTAAACACCA 59.754 43.478 0.00 0.00 0.00 4.17
41 42 4.084223 CGTCGTTGCTTTAGTAAACACCAT 60.084 41.667 0.00 0.00 0.00 3.55
42 43 5.118971 CGTCGTTGCTTTAGTAAACACCATA 59.881 40.000 0.00 0.00 0.00 2.74
43 44 6.183360 CGTCGTTGCTTTAGTAAACACCATAT 60.183 38.462 0.00 0.00 0.00 1.78
44 45 7.524065 GTCGTTGCTTTAGTAAACACCATATT 58.476 34.615 0.00 0.00 0.00 1.28
45 46 8.658609 GTCGTTGCTTTAGTAAACACCATATTA 58.341 33.333 0.00 0.00 0.00 0.98
46 47 9.217278 TCGTTGCTTTAGTAAACACCATATTAA 57.783 29.630 0.00 0.00 0.00 1.40
47 48 9.828852 CGTTGCTTTAGTAAACACCATATTAAA 57.171 29.630 0.00 0.00 0.00 1.52
106 107 8.671384 TTAGTTTGATCTTTATTATCGGGTGG 57.329 34.615 0.00 0.00 0.00 4.61
107 108 6.895782 AGTTTGATCTTTATTATCGGGTGGA 58.104 36.000 0.00 0.00 0.00 4.02
108 109 7.518188 AGTTTGATCTTTATTATCGGGTGGAT 58.482 34.615 0.00 0.00 39.25 3.41
109 110 7.445402 AGTTTGATCTTTATTATCGGGTGGATG 59.555 37.037 0.00 0.00 36.55 3.51
110 111 5.245531 TGATCTTTATTATCGGGTGGATGC 58.754 41.667 0.00 0.00 36.55 3.91
111 112 4.698201 TCTTTATTATCGGGTGGATGCA 57.302 40.909 0.00 0.00 36.55 3.96
112 113 5.042463 TCTTTATTATCGGGTGGATGCAA 57.958 39.130 0.00 0.00 36.55 4.08
113 114 5.630121 TCTTTATTATCGGGTGGATGCAAT 58.370 37.500 0.00 0.00 36.55 3.56
114 115 5.473162 TCTTTATTATCGGGTGGATGCAATG 59.527 40.000 0.00 0.00 36.55 2.82
115 116 3.507162 ATTATCGGGTGGATGCAATGA 57.493 42.857 0.00 0.00 36.55 2.57
116 117 3.289407 TTATCGGGTGGATGCAATGAA 57.711 42.857 0.00 0.00 36.55 2.57
117 118 1.683943 ATCGGGTGGATGCAATGAAG 58.316 50.000 0.00 0.00 32.92 3.02
118 119 0.617935 TCGGGTGGATGCAATGAAGA 59.382 50.000 0.00 0.00 0.00 2.87
119 120 1.004161 TCGGGTGGATGCAATGAAGAA 59.996 47.619 0.00 0.00 0.00 2.52
120 121 2.026641 CGGGTGGATGCAATGAAGAAT 58.973 47.619 0.00 0.00 0.00 2.40
121 122 3.118075 TCGGGTGGATGCAATGAAGAATA 60.118 43.478 0.00 0.00 0.00 1.75
122 123 3.822735 CGGGTGGATGCAATGAAGAATAT 59.177 43.478 0.00 0.00 0.00 1.28
123 124 4.320714 CGGGTGGATGCAATGAAGAATATG 60.321 45.833 0.00 0.00 0.00 1.78
124 125 4.828939 GGGTGGATGCAATGAAGAATATGA 59.171 41.667 0.00 0.00 0.00 2.15
125 126 5.479375 GGGTGGATGCAATGAAGAATATGAT 59.521 40.000 0.00 0.00 0.00 2.45
126 127 6.387465 GGTGGATGCAATGAAGAATATGATG 58.613 40.000 0.00 0.00 0.00 3.07
127 128 6.208007 GGTGGATGCAATGAAGAATATGATGA 59.792 38.462 0.00 0.00 0.00 2.92
128 129 7.255695 GGTGGATGCAATGAAGAATATGATGAA 60.256 37.037 0.00 0.00 0.00 2.57
129 130 7.594015 GTGGATGCAATGAAGAATATGATGAAC 59.406 37.037 0.00 0.00 0.00 3.18
130 131 7.504574 TGGATGCAATGAAGAATATGATGAACT 59.495 33.333 0.00 0.00 0.00 3.01
131 132 9.006839 GGATGCAATGAAGAATATGATGAACTA 57.993 33.333 0.00 0.00 0.00 2.24
140 141 9.890352 GAAGAATATGATGAACTATTTCCAAGC 57.110 33.333 0.00 0.00 0.00 4.01
141 142 8.985315 AGAATATGATGAACTATTTCCAAGCA 57.015 30.769 0.00 0.00 0.00 3.91
142 143 9.584008 AGAATATGATGAACTATTTCCAAGCAT 57.416 29.630 0.00 0.00 0.00 3.79
145 146 7.756395 ATGATGAACTATTTCCAAGCATAGG 57.244 36.000 0.00 0.00 0.00 2.57
146 147 6.064060 TGATGAACTATTTCCAAGCATAGGG 58.936 40.000 0.00 0.00 0.00 3.53
147 148 5.450818 TGAACTATTTCCAAGCATAGGGT 57.549 39.130 0.00 0.00 0.00 4.34
148 149 5.826643 TGAACTATTTCCAAGCATAGGGTT 58.173 37.500 0.00 0.00 34.43 4.11
154 155 2.886382 CAAGCATAGGGTTGGGTGG 58.114 57.895 11.32 0.00 46.19 4.61
155 156 0.331278 CAAGCATAGGGTTGGGTGGA 59.669 55.000 11.32 0.00 46.19 4.02
156 157 1.080638 AAGCATAGGGTTGGGTGGAA 58.919 50.000 0.00 0.00 32.52 3.53
157 158 0.331616 AGCATAGGGTTGGGTGGAAC 59.668 55.000 0.00 0.00 0.00 3.62
172 173 3.528532 GTGGAACCATAACTCCGTTAGG 58.471 50.000 0.00 0.00 34.14 2.69
173 174 3.055602 GTGGAACCATAACTCCGTTAGGT 60.056 47.826 0.00 0.00 39.05 3.08
174 175 3.055675 TGGAACCATAACTCCGTTAGGTG 60.056 47.826 0.00 0.00 39.05 4.00
175 176 3.055602 GGAACCATAACTCCGTTAGGTGT 60.056 47.826 0.00 0.00 45.31 4.16
176 177 3.881937 ACCATAACTCCGTTAGGTGTC 57.118 47.619 0.00 0.00 42.85 3.67
177 178 3.167485 ACCATAACTCCGTTAGGTGTCA 58.833 45.455 0.00 0.00 42.85 3.58
178 179 3.194968 ACCATAACTCCGTTAGGTGTCAG 59.805 47.826 0.00 0.00 42.85 3.51
179 180 3.446161 CCATAACTCCGTTAGGTGTCAGA 59.554 47.826 0.00 0.00 42.85 3.27
180 181 4.099573 CCATAACTCCGTTAGGTGTCAGAT 59.900 45.833 0.00 0.00 42.85 2.90
181 182 3.594603 AACTCCGTTAGGTGTCAGATG 57.405 47.619 0.00 0.00 42.85 2.90
182 183 1.825474 ACTCCGTTAGGTGTCAGATGG 59.175 52.381 0.00 0.00 39.87 3.51
183 184 1.825474 CTCCGTTAGGTGTCAGATGGT 59.175 52.381 0.00 0.00 39.05 3.55
184 185 1.548719 TCCGTTAGGTGTCAGATGGTG 59.451 52.381 0.00 0.00 39.05 4.17
185 186 1.275291 CCGTTAGGTGTCAGATGGTGT 59.725 52.381 0.00 0.00 0.00 4.16
186 187 2.289444 CCGTTAGGTGTCAGATGGTGTT 60.289 50.000 0.00 0.00 0.00 3.32
187 188 2.736721 CGTTAGGTGTCAGATGGTGTTG 59.263 50.000 0.00 0.00 0.00 3.33
188 189 2.472695 TAGGTGTCAGATGGTGTTGC 57.527 50.000 0.00 0.00 0.00 4.17
189 190 0.603707 AGGTGTCAGATGGTGTTGCG 60.604 55.000 0.00 0.00 0.00 4.85
190 191 1.577328 GGTGTCAGATGGTGTTGCGG 61.577 60.000 0.00 0.00 0.00 5.69
191 192 0.884704 GTGTCAGATGGTGTTGCGGT 60.885 55.000 0.00 0.00 0.00 5.68
192 193 0.602638 TGTCAGATGGTGTTGCGGTC 60.603 55.000 0.00 0.00 0.00 4.79
193 194 1.003839 TCAGATGGTGTTGCGGTCC 60.004 57.895 0.00 0.00 0.00 4.46
194 195 1.003355 CAGATGGTGTTGCGGTCCT 60.003 57.895 0.00 0.00 0.00 3.85
195 196 1.003355 AGATGGTGTTGCGGTCCTG 60.003 57.895 0.00 0.00 0.00 3.86
196 197 2.672996 ATGGTGTTGCGGTCCTGC 60.673 61.111 0.00 0.00 0.00 4.85
197 198 3.196207 ATGGTGTTGCGGTCCTGCT 62.196 57.895 7.14 0.00 35.36 4.24
198 199 1.836999 ATGGTGTTGCGGTCCTGCTA 61.837 55.000 7.14 0.00 35.36 3.49
199 200 1.302192 GGTGTTGCGGTCCTGCTAA 60.302 57.895 7.14 0.00 35.36 3.09
200 201 0.887387 GGTGTTGCGGTCCTGCTAAA 60.887 55.000 7.14 0.00 35.36 1.85
201 202 1.165270 GTGTTGCGGTCCTGCTAAAT 58.835 50.000 7.14 0.00 35.36 1.40
202 203 1.135689 GTGTTGCGGTCCTGCTAAATG 60.136 52.381 7.14 0.00 35.36 2.32
203 204 1.165270 GTTGCGGTCCTGCTAAATGT 58.835 50.000 7.14 0.00 35.36 2.71
204 205 1.130561 GTTGCGGTCCTGCTAAATGTC 59.869 52.381 7.14 0.00 35.36 3.06
205 206 0.613260 TGCGGTCCTGCTAAATGTCT 59.387 50.000 7.14 0.00 35.36 3.41
206 207 1.003118 TGCGGTCCTGCTAAATGTCTT 59.997 47.619 7.14 0.00 35.36 3.01
207 208 1.666189 GCGGTCCTGCTAAATGTCTTC 59.334 52.381 0.00 0.00 0.00 2.87
208 209 2.280628 CGGTCCTGCTAAATGTCTTCC 58.719 52.381 0.00 0.00 0.00 3.46
209 210 2.093447 CGGTCCTGCTAAATGTCTTCCT 60.093 50.000 0.00 0.00 0.00 3.36
210 211 3.619979 CGGTCCTGCTAAATGTCTTCCTT 60.620 47.826 0.00 0.00 0.00 3.36
211 212 4.336280 GGTCCTGCTAAATGTCTTCCTTT 58.664 43.478 0.00 0.00 0.00 3.11
212 213 4.156739 GGTCCTGCTAAATGTCTTCCTTTG 59.843 45.833 0.00 0.00 0.00 2.77
213 214 4.762251 GTCCTGCTAAATGTCTTCCTTTGT 59.238 41.667 0.00 0.00 0.00 2.83
214 215 5.241728 GTCCTGCTAAATGTCTTCCTTTGTT 59.758 40.000 0.00 0.00 0.00 2.83
215 216 6.430000 GTCCTGCTAAATGTCTTCCTTTGTTA 59.570 38.462 0.00 0.00 0.00 2.41
216 217 7.121315 GTCCTGCTAAATGTCTTCCTTTGTTAT 59.879 37.037 0.00 0.00 0.00 1.89
217 218 7.336931 TCCTGCTAAATGTCTTCCTTTGTTATC 59.663 37.037 0.00 0.00 0.00 1.75
218 219 7.337942 CCTGCTAAATGTCTTCCTTTGTTATCT 59.662 37.037 0.00 0.00 0.00 1.98
219 220 8.635765 TGCTAAATGTCTTCCTTTGTTATCTT 57.364 30.769 0.00 0.00 0.00 2.40
220 221 8.514594 TGCTAAATGTCTTCCTTTGTTATCTTG 58.485 33.333 0.00 0.00 0.00 3.02
221 222 7.970614 GCTAAATGTCTTCCTTTGTTATCTTGG 59.029 37.037 0.00 0.00 0.00 3.61
222 223 7.839680 AAATGTCTTCCTTTGTTATCTTGGT 57.160 32.000 0.00 0.00 0.00 3.67
223 224 7.839680 AATGTCTTCCTTTGTTATCTTGGTT 57.160 32.000 0.00 0.00 0.00 3.67
224 225 6.877611 TGTCTTCCTTTGTTATCTTGGTTC 57.122 37.500 0.00 0.00 0.00 3.62
225 226 5.468746 TGTCTTCCTTTGTTATCTTGGTTCG 59.531 40.000 0.00 0.00 0.00 3.95
226 227 5.001232 TCTTCCTTTGTTATCTTGGTTCGG 58.999 41.667 0.00 0.00 0.00 4.30
227 228 4.360951 TCCTTTGTTATCTTGGTTCGGT 57.639 40.909 0.00 0.00 0.00 4.69
228 229 4.721132 TCCTTTGTTATCTTGGTTCGGTT 58.279 39.130 0.00 0.00 0.00 4.44
229 230 4.758165 TCCTTTGTTATCTTGGTTCGGTTC 59.242 41.667 0.00 0.00 0.00 3.62
230 231 4.517453 CCTTTGTTATCTTGGTTCGGTTCA 59.483 41.667 0.00 0.00 0.00 3.18
231 232 5.009210 CCTTTGTTATCTTGGTTCGGTTCAA 59.991 40.000 0.00 0.00 0.00 2.69
232 233 6.294508 CCTTTGTTATCTTGGTTCGGTTCAAT 60.295 38.462 0.00 0.00 0.00 2.57
233 234 7.094549 CCTTTGTTATCTTGGTTCGGTTCAATA 60.095 37.037 0.00 0.00 0.00 1.90
234 235 6.730960 TGTTATCTTGGTTCGGTTCAATAC 57.269 37.500 0.00 0.00 0.00 1.89
235 236 6.469410 TGTTATCTTGGTTCGGTTCAATACT 58.531 36.000 0.00 0.00 0.00 2.12
236 237 6.938030 TGTTATCTTGGTTCGGTTCAATACTT 59.062 34.615 0.00 0.00 0.00 2.24
237 238 7.118680 TGTTATCTTGGTTCGGTTCAATACTTC 59.881 37.037 0.00 0.00 0.00 3.01
238 239 5.223449 TCTTGGTTCGGTTCAATACTTCT 57.777 39.130 0.00 0.00 0.00 2.85
239 240 5.617252 TCTTGGTTCGGTTCAATACTTCTT 58.383 37.500 0.00 0.00 0.00 2.52
240 241 6.761312 TCTTGGTTCGGTTCAATACTTCTTA 58.239 36.000 0.00 0.00 0.00 2.10
241 242 7.218614 TCTTGGTTCGGTTCAATACTTCTTAA 58.781 34.615 0.00 0.00 0.00 1.85
242 243 7.386848 TCTTGGTTCGGTTCAATACTTCTTAAG 59.613 37.037 0.00 0.00 0.00 1.85
243 244 5.935789 TGGTTCGGTTCAATACTTCTTAAGG 59.064 40.000 1.85 0.00 0.00 2.69
244 245 6.168389 GGTTCGGTTCAATACTTCTTAAGGA 58.832 40.000 1.85 0.00 0.00 3.36
245 246 6.652062 GGTTCGGTTCAATACTTCTTAAGGAA 59.348 38.462 1.85 0.00 0.00 3.36
246 247 7.173735 GGTTCGGTTCAATACTTCTTAAGGAAA 59.826 37.037 1.85 0.00 33.07 3.13
247 248 8.562052 GTTCGGTTCAATACTTCTTAAGGAAAA 58.438 33.333 1.85 0.00 33.07 2.29
248 249 8.857694 TCGGTTCAATACTTCTTAAGGAAAAT 57.142 30.769 1.85 0.00 33.07 1.82
249 250 9.947433 TCGGTTCAATACTTCTTAAGGAAAATA 57.053 29.630 1.85 0.00 33.07 1.40
259 260 9.930693 ACTTCTTAAGGAAAATAGTACACTGAG 57.069 33.333 1.85 0.00 33.07 3.35
260 261 8.773404 TTCTTAAGGAAAATAGTACACTGAGC 57.227 34.615 1.85 0.00 0.00 4.26
261 262 7.328737 TCTTAAGGAAAATAGTACACTGAGCC 58.671 38.462 1.85 0.00 0.00 4.70
262 263 4.124851 AGGAAAATAGTACACTGAGCCG 57.875 45.455 0.00 0.00 0.00 5.52
263 264 3.118738 AGGAAAATAGTACACTGAGCCGG 60.119 47.826 0.00 0.00 0.00 6.13
264 265 3.369157 GGAAAATAGTACACTGAGCCGGT 60.369 47.826 1.90 0.00 0.00 5.28
265 266 4.142093 GGAAAATAGTACACTGAGCCGGTA 60.142 45.833 1.90 0.00 0.00 4.02
266 267 5.452917 GGAAAATAGTACACTGAGCCGGTAT 60.453 44.000 1.90 0.00 0.00 2.73
267 268 4.585955 AATAGTACACTGAGCCGGTATG 57.414 45.455 1.90 0.00 0.00 2.39
268 269 0.460311 AGTACACTGAGCCGGTATGC 59.540 55.000 1.90 0.00 0.00 3.14
269 270 0.460311 GTACACTGAGCCGGTATGCT 59.540 55.000 1.90 0.00 46.37 3.79
270 271 1.134788 GTACACTGAGCCGGTATGCTT 60.135 52.381 1.90 0.00 42.95 3.91
271 272 0.391661 ACACTGAGCCGGTATGCTTG 60.392 55.000 1.90 0.00 42.95 4.01
272 273 1.450312 ACTGAGCCGGTATGCTTGC 60.450 57.895 1.90 0.00 42.95 4.01
273 274 1.153289 CTGAGCCGGTATGCTTGCT 60.153 57.895 1.90 0.00 42.95 3.91
274 275 1.434622 CTGAGCCGGTATGCTTGCTG 61.435 60.000 1.90 0.00 42.95 4.41
275 276 2.124570 AGCCGGTATGCTTGCTGG 60.125 61.111 10.75 10.75 38.85 4.85
277 278 3.211963 CCGGTATGCTTGCTGGCC 61.212 66.667 0.00 0.00 0.00 5.36
278 279 3.576356 CGGTATGCTTGCTGGCCG 61.576 66.667 0.00 0.00 0.00 6.13
279 280 2.438434 GGTATGCTTGCTGGCCGT 60.438 61.111 0.00 0.00 0.00 5.68
280 281 2.472909 GGTATGCTTGCTGGCCGTC 61.473 63.158 0.00 0.00 0.00 4.79
281 282 1.745115 GTATGCTTGCTGGCCGTCA 60.745 57.895 0.00 0.00 0.00 4.35
282 283 1.097547 GTATGCTTGCTGGCCGTCAT 61.098 55.000 0.00 0.00 0.00 3.06
283 284 1.096967 TATGCTTGCTGGCCGTCATG 61.097 55.000 0.00 1.83 0.00 3.07
284 285 3.818787 GCTTGCTGGCCGTCATGG 61.819 66.667 0.00 0.00 42.50 3.66
285 286 2.046023 CTTGCTGGCCGTCATGGA 60.046 61.111 0.00 0.00 42.00 3.41
293 294 2.386661 GGCCGTCATGGACCTATATG 57.613 55.000 0.00 0.00 41.58 1.78
294 295 1.676014 GGCCGTCATGGACCTATATGC 60.676 57.143 0.00 0.00 41.58 3.14
295 296 1.001974 GCCGTCATGGACCTATATGCA 59.998 52.381 0.00 0.00 42.00 3.96
296 297 2.688507 CCGTCATGGACCTATATGCAC 58.311 52.381 0.00 0.00 42.00 4.57
297 298 2.300152 CCGTCATGGACCTATATGCACT 59.700 50.000 0.00 0.00 42.00 4.40
298 299 3.244215 CCGTCATGGACCTATATGCACTT 60.244 47.826 0.00 0.00 42.00 3.16
299 300 4.380531 CGTCATGGACCTATATGCACTTT 58.619 43.478 0.00 0.00 0.00 2.66
300 301 4.212004 CGTCATGGACCTATATGCACTTTG 59.788 45.833 0.00 0.00 0.00 2.77
301 302 5.368145 GTCATGGACCTATATGCACTTTGA 58.632 41.667 0.00 0.00 0.00 2.69
302 303 5.468072 GTCATGGACCTATATGCACTTTGAG 59.532 44.000 0.00 0.00 0.00 3.02
303 304 5.366477 TCATGGACCTATATGCACTTTGAGA 59.634 40.000 0.00 0.00 0.00 3.27
304 305 5.282055 TGGACCTATATGCACTTTGAGAG 57.718 43.478 0.00 0.00 0.00 3.20
305 306 4.101585 TGGACCTATATGCACTTTGAGAGG 59.898 45.833 0.00 0.00 0.00 3.69
306 307 4.101741 GGACCTATATGCACTTTGAGAGGT 59.898 45.833 0.00 0.00 38.76 3.85
307 308 5.028549 ACCTATATGCACTTTGAGAGGTG 57.971 43.478 0.00 0.00 34.78 4.00
316 317 5.227238 CACTTTGAGAGGTGCAATACATC 57.773 43.478 0.00 0.00 40.30 3.06
317 318 4.696877 CACTTTGAGAGGTGCAATACATCA 59.303 41.667 0.00 0.00 42.37 3.07
318 319 4.697352 ACTTTGAGAGGTGCAATACATCAC 59.303 41.667 0.00 0.00 42.37 3.06
325 326 3.747099 GTGCAATACATCACCAGTGAC 57.253 47.619 1.88 0.00 43.11 3.67
326 327 2.094258 GTGCAATACATCACCAGTGACG 59.906 50.000 1.88 0.00 43.11 4.35
327 328 2.289382 TGCAATACATCACCAGTGACGT 60.289 45.455 4.78 4.78 43.11 4.34
328 329 2.348666 GCAATACATCACCAGTGACGTC 59.651 50.000 9.11 9.11 43.11 4.34
329 330 2.930040 CAATACATCACCAGTGACGTCC 59.070 50.000 14.12 4.42 43.11 4.79
330 331 1.623163 TACATCACCAGTGACGTCCA 58.377 50.000 14.12 0.00 43.11 4.02
331 332 0.033504 ACATCACCAGTGACGTCCAC 59.966 55.000 14.12 11.25 43.11 4.02
342 343 4.627611 GTGACGTCCACTAGCTATACAA 57.372 45.455 14.12 0.00 42.44 2.41
343 344 4.599047 GTGACGTCCACTAGCTATACAAG 58.401 47.826 14.12 0.00 42.44 3.16
344 345 5.023382 GTGACGTCCACTAGCTATACAAGC 61.023 50.000 14.12 0.00 45.89 4.01
345 346 7.939166 GTGACGTCCACTAGCTATACAAGCC 62.939 52.000 14.12 0.00 46.30 4.35
353 354 2.832672 GCTATACAAGCCAACACAGC 57.167 50.000 0.00 0.00 46.25 4.40
354 355 1.401905 GCTATACAAGCCAACACAGCC 59.598 52.381 0.00 0.00 46.25 4.85
355 356 2.710377 CTATACAAGCCAACACAGCCA 58.290 47.619 0.00 0.00 0.00 4.75
356 357 1.993956 ATACAAGCCAACACAGCCAA 58.006 45.000 0.00 0.00 0.00 4.52
357 358 1.028905 TACAAGCCAACACAGCCAAC 58.971 50.000 0.00 0.00 0.00 3.77
358 359 0.969917 ACAAGCCAACACAGCCAACA 60.970 50.000 0.00 0.00 0.00 3.33
359 360 0.390124 CAAGCCAACACAGCCAACAT 59.610 50.000 0.00 0.00 0.00 2.71
360 361 0.390124 AAGCCAACACAGCCAACATG 59.610 50.000 0.00 0.00 0.00 3.21
361 362 1.665599 GCCAACACAGCCAACATGC 60.666 57.895 0.00 0.00 0.00 4.06
362 363 1.005867 CCAACACAGCCAACATGCC 60.006 57.895 0.00 0.00 0.00 4.40
363 364 1.740905 CAACACAGCCAACATGCCA 59.259 52.632 0.00 0.00 0.00 4.92
364 365 0.319211 CAACACAGCCAACATGCCAG 60.319 55.000 0.00 0.00 0.00 4.85
365 366 0.756442 AACACAGCCAACATGCCAGT 60.756 50.000 0.00 0.00 0.00 4.00
366 367 0.110295 ACACAGCCAACATGCCAGTA 59.890 50.000 0.00 0.00 0.00 2.74
367 368 1.272092 ACACAGCCAACATGCCAGTAT 60.272 47.619 0.00 0.00 0.00 2.12
368 369 2.026356 ACACAGCCAACATGCCAGTATA 60.026 45.455 0.00 0.00 0.00 1.47
369 370 3.216800 CACAGCCAACATGCCAGTATAT 58.783 45.455 0.00 0.00 0.00 0.86
370 371 3.251729 CACAGCCAACATGCCAGTATATC 59.748 47.826 0.00 0.00 0.00 1.63
371 372 3.137176 ACAGCCAACATGCCAGTATATCT 59.863 43.478 0.00 0.00 0.00 1.98
372 373 3.501062 CAGCCAACATGCCAGTATATCTG 59.499 47.826 0.00 0.00 43.27 2.90
373 374 3.392285 AGCCAACATGCCAGTATATCTGA 59.608 43.478 0.00 0.00 46.27 3.27
374 375 3.499918 GCCAACATGCCAGTATATCTGAC 59.500 47.826 0.00 0.00 46.27 3.51
375 376 4.707105 CCAACATGCCAGTATATCTGACA 58.293 43.478 0.00 0.34 46.27 3.58
376 377 5.311265 CCAACATGCCAGTATATCTGACAT 58.689 41.667 0.00 2.32 45.61 3.06
380 381 4.607293 TGCCAGTATATCTGACATGTCC 57.393 45.455 22.85 5.68 46.27 4.02
381 382 3.966665 TGCCAGTATATCTGACATGTCCA 59.033 43.478 22.85 10.09 46.27 4.02
382 383 4.408596 TGCCAGTATATCTGACATGTCCAA 59.591 41.667 22.85 11.27 46.27 3.53
383 384 4.752101 GCCAGTATATCTGACATGTCCAAC 59.248 45.833 22.85 11.24 46.27 3.77
384 385 4.984785 CCAGTATATCTGACATGTCCAACG 59.015 45.833 22.85 8.97 46.27 4.10
385 386 5.451937 CCAGTATATCTGACATGTCCAACGT 60.452 44.000 22.85 9.04 46.27 3.99
386 387 6.238925 CCAGTATATCTGACATGTCCAACGTA 60.239 42.308 22.85 9.20 46.27 3.57
387 388 7.200455 CAGTATATCTGACATGTCCAACGTAA 58.800 38.462 22.85 1.47 46.27 3.18
388 389 7.867909 CAGTATATCTGACATGTCCAACGTAAT 59.132 37.037 22.85 9.65 46.27 1.89
389 390 9.074576 AGTATATCTGACATGTCCAACGTAATA 57.925 33.333 22.85 9.93 0.00 0.98
390 391 9.856488 GTATATCTGACATGTCCAACGTAATAT 57.144 33.333 22.85 15.06 0.00 1.28
391 392 8.988064 ATATCTGACATGTCCAACGTAATATC 57.012 34.615 22.85 0.00 0.00 1.63
392 393 6.465439 TCTGACATGTCCAACGTAATATCT 57.535 37.500 22.85 0.00 0.00 1.98
393 394 6.873997 TCTGACATGTCCAACGTAATATCTT 58.126 36.000 22.85 0.00 0.00 2.40
394 395 6.756542 TCTGACATGTCCAACGTAATATCTTG 59.243 38.462 22.85 0.00 0.00 3.02
395 396 5.293324 TGACATGTCCAACGTAATATCTTGC 59.707 40.000 22.85 0.00 0.00 4.01
396 397 4.574828 ACATGTCCAACGTAATATCTTGCC 59.425 41.667 0.00 0.00 0.00 4.52
397 398 3.537580 TGTCCAACGTAATATCTTGCCC 58.462 45.455 0.00 0.00 0.00 5.36
398 399 2.876550 GTCCAACGTAATATCTTGCCCC 59.123 50.000 0.00 0.00 0.00 5.80
399 400 1.871039 CCAACGTAATATCTTGCCCCG 59.129 52.381 0.00 0.00 0.00 5.73
400 401 1.871039 CAACGTAATATCTTGCCCCGG 59.129 52.381 0.00 0.00 0.00 5.73
401 402 0.395312 ACGTAATATCTTGCCCCGGG 59.605 55.000 15.80 15.80 0.00 5.73
402 403 0.321298 CGTAATATCTTGCCCCGGGG 60.321 60.000 37.09 37.09 38.57 5.73
413 414 2.393416 CCCCGGGGGCAATATATCA 58.607 57.895 34.01 0.00 35.35 2.15
414 415 0.926293 CCCCGGGGGCAATATATCAT 59.074 55.000 34.01 0.00 35.35 2.45
415 416 1.133792 CCCCGGGGGCAATATATCATC 60.134 57.143 34.01 0.00 35.35 2.92
416 417 1.563879 CCCGGGGGCAATATATCATCA 59.436 52.381 14.71 0.00 0.00 3.07
423 424 3.935203 GGGCAATATATCATCAGTGTCCG 59.065 47.826 0.00 0.00 0.00 4.79
429 430 7.412346 GCAATATATCATCAGTGTCCGATGTTC 60.412 40.741 0.00 0.00 40.92 3.18
440 441 3.374367 TGTCCGATGTTCGTTTCAACAAA 59.626 39.130 0.00 0.00 39.69 2.83
441 442 4.035792 TGTCCGATGTTCGTTTCAACAAAT 59.964 37.500 0.00 0.00 39.69 2.32
443 444 5.562623 GTCCGATGTTCGTTTCAACAAATAC 59.437 40.000 0.00 0.00 39.69 1.89
520 528 4.320861 CCATAAATGCTCACCACGTTTTCA 60.321 41.667 0.00 0.00 0.00 2.69
545 553 3.957671 ATTGCGTAATCTGCACTCATG 57.042 42.857 0.00 0.00 43.10 3.07
573 581 4.704965 GGAAGATATTCACCACCCAGTAC 58.295 47.826 1.97 0.00 0.00 2.73
583 591 2.189521 CCCAGTACCGGCATGGAC 59.810 66.667 19.07 2.77 42.00 4.02
714 732 4.771356 CACACATGCAGCTGCCGC 62.771 66.667 34.64 12.23 41.18 6.53
747 765 2.239680 AAACCACCCAAAACCCCCGA 62.240 55.000 0.00 0.00 0.00 5.14
748 766 2.282887 CCACCCAAAACCCCCGAG 60.283 66.667 0.00 0.00 0.00 4.63
749 767 2.989253 CACCCAAAACCCCCGAGC 60.989 66.667 0.00 0.00 0.00 5.03
750 768 4.295199 ACCCAAAACCCCCGAGCC 62.295 66.667 0.00 0.00 0.00 4.70
751 769 4.293671 CCCAAAACCCCCGAGCCA 62.294 66.667 0.00 0.00 0.00 4.75
752 770 2.676471 CCAAAACCCCCGAGCCAG 60.676 66.667 0.00 0.00 0.00 4.85
753 771 3.373565 CAAAACCCCCGAGCCAGC 61.374 66.667 0.00 0.00 0.00 4.85
857 875 2.040544 AGAGAAATGGCGCCAACCG 61.041 57.895 36.33 0.00 40.75 4.44
958 976 0.625980 TGGCTACCCAATCCCATCCA 60.626 55.000 0.00 0.00 38.46 3.41
959 977 0.779997 GGCTACCCAATCCCATCCAT 59.220 55.000 0.00 0.00 0.00 3.41
960 978 1.272147 GGCTACCCAATCCCATCCATC 60.272 57.143 0.00 0.00 0.00 3.51
963 981 0.630175 ACCCAATCCCATCCATCCCA 60.630 55.000 0.00 0.00 0.00 4.37
964 982 0.788383 CCCAATCCCATCCATCCCAT 59.212 55.000 0.00 0.00 0.00 4.00
965 983 1.272872 CCCAATCCCATCCATCCCATC 60.273 57.143 0.00 0.00 0.00 3.51
967 985 1.714787 CAATCCCATCCATCCCATCCT 59.285 52.381 0.00 0.00 0.00 3.24
968 986 2.921612 CAATCCCATCCATCCCATCCTA 59.078 50.000 0.00 0.00 0.00 2.94
969 987 2.349167 TCCCATCCATCCCATCCTAG 57.651 55.000 0.00 0.00 0.00 3.02
973 991 0.551131 ATCCATCCCATCCTAGCCCC 60.551 60.000 0.00 0.00 0.00 5.80
1701 1726 1.080366 CGAAATGGGACGACGGACA 60.080 57.895 0.00 0.00 0.00 4.02
1867 1897 7.254932 GGAATCTATACACAAGCAATTCTCCAC 60.255 40.741 0.00 0.00 0.00 4.02
1880 1910 5.123979 GCAATTCTCCACGAAGAAAGGTATT 59.876 40.000 0.00 0.00 38.69 1.89
3272 3315 9.386122 AGGACAGTTTATGGATAGATTAGATGT 57.614 33.333 0.00 0.00 0.00 3.06
3450 3493 4.133078 CAACCCTTTGGCTATCAGATCTC 58.867 47.826 0.00 0.00 33.59 2.75
3453 3496 3.903090 CCCTTTGGCTATCAGATCTCTCT 59.097 47.826 0.00 0.00 0.00 3.10
3457 3500 4.190370 TGGCTATCAGATCTCTCTTCCA 57.810 45.455 0.00 0.00 0.00 3.53
3459 3502 4.771577 TGGCTATCAGATCTCTCTTCCATC 59.228 45.833 0.00 0.00 0.00 3.51
3467 3510 8.082672 TCAGATCTCTCTTCCATCACAAAATA 57.917 34.615 0.00 0.00 0.00 1.40
3477 3520 8.739039 TCTTCCATCACAAAATATGTAAGTTGG 58.261 33.333 0.00 0.00 41.46 3.77
3480 3523 7.039434 TCCATCACAAAATATGTAAGTTGGCAA 60.039 33.333 0.00 0.00 41.46 4.52
3498 3541 9.260002 AGTTGGCAAACTTTTATAATTGTTGAG 57.740 29.630 0.00 3.50 44.47 3.02
3564 3607 6.681729 TTCTTACAGGTCATAAACTGTCCT 57.318 37.500 0.00 0.00 44.08 3.85
3576 3619 8.660373 GTCATAAACTGTCCTAATTTGAGTGAG 58.340 37.037 0.00 0.00 0.00 3.51
3582 3625 4.528206 TGTCCTAATTTGAGTGAGCTCTCA 59.472 41.667 16.19 8.49 42.13 3.27
3615 3658 8.519799 TTTCCCAACAAGATAATGATTCTACC 57.480 34.615 0.00 0.00 0.00 3.18
3618 3661 6.936900 CCCAACAAGATAATGATTCTACCGAT 59.063 38.462 0.00 0.00 0.00 4.18
3678 3721 7.656542 TGCTTGAATTTGAGAAAATTGCACATA 59.343 29.630 1.37 0.00 32.92 2.29
3785 3828 8.447833 CAAATGGATTGTTGATCAAATTTCAGG 58.552 33.333 10.35 0.00 39.62 3.86
3791 3834 9.211485 GATTGTTGATCAAATTTCAGGAATTGT 57.789 29.630 10.35 0.00 37.98 2.71
3796 3839 4.885413 TCAAATTTCAGGAATTGTGCTGG 58.115 39.130 0.00 0.00 43.13 4.85
3797 3840 4.588106 TCAAATTTCAGGAATTGTGCTGGA 59.412 37.500 0.00 0.00 43.13 3.86
3798 3841 4.525912 AATTTCAGGAATTGTGCTGGAC 57.474 40.909 0.00 0.00 43.13 4.02
3799 3842 2.957402 TTCAGGAATTGTGCTGGACT 57.043 45.000 0.00 0.00 43.13 3.85
3800 3843 2.189594 TCAGGAATTGTGCTGGACTG 57.810 50.000 0.00 0.00 43.13 3.51
3802 3845 2.106338 TCAGGAATTGTGCTGGACTGAA 59.894 45.455 0.00 0.00 43.13 3.02
3803 3846 2.227388 CAGGAATTGTGCTGGACTGAAC 59.773 50.000 0.00 0.00 39.43 3.18
3804 3847 2.107204 AGGAATTGTGCTGGACTGAACT 59.893 45.455 0.00 0.00 0.00 3.01
3839 3882 7.945033 TTCTTGCTTATTTCATTTCAACCAC 57.055 32.000 0.00 0.00 0.00 4.16
3846 3889 9.516314 GCTTATTTCATTTCAACCACCTTATAC 57.484 33.333 0.00 0.00 0.00 1.47
3872 3915 4.335400 TTTTTCTTGTTTCATCAGGGGC 57.665 40.909 0.00 0.00 0.00 5.80
3991 4034 2.414957 GCGGGTATGTGCTGGTTTTTAC 60.415 50.000 0.00 0.00 0.00 2.01
4013 4056 3.313526 CGAAGCCTAATGGTTTGGAGATG 59.686 47.826 0.00 0.00 36.89 2.90
4014 4057 4.526970 GAAGCCTAATGGTTTGGAGATGA 58.473 43.478 0.00 0.00 36.89 2.92
4016 4059 5.912149 AGCCTAATGGTTTGGAGATGATA 57.088 39.130 0.00 0.00 35.27 2.15
4018 4061 6.856757 AGCCTAATGGTTTGGAGATGATATT 58.143 36.000 0.00 0.00 35.27 1.28
4021 4064 7.869429 GCCTAATGGTTTGGAGATGATATTTTG 59.131 37.037 0.00 0.00 35.27 2.44
4022 4065 8.917088 CCTAATGGTTTGGAGATGATATTTTGT 58.083 33.333 0.00 0.00 0.00 2.83
4026 4069 9.657419 ATGGTTTGGAGATGATATTTTGTTTTC 57.343 29.630 0.00 0.00 0.00 2.29
4027 4070 8.869109 TGGTTTGGAGATGATATTTTGTTTTCT 58.131 29.630 0.00 0.00 0.00 2.52
4059 4102 5.755861 TGCAAAATAAAGCCTAAACCAACAC 59.244 36.000 0.00 0.00 0.00 3.32
4060 4103 5.755861 GCAAAATAAAGCCTAAACCAACACA 59.244 36.000 0.00 0.00 0.00 3.72
4061 4104 6.426633 GCAAAATAAAGCCTAAACCAACACAT 59.573 34.615 0.00 0.00 0.00 3.21
4062 4105 7.571059 GCAAAATAAAGCCTAAACCAACACATG 60.571 37.037 0.00 0.00 0.00 3.21
4065 4108 8.588290 AATAAAGCCTAAACCAACACATGATA 57.412 30.769 0.00 0.00 0.00 2.15
4069 4112 6.717289 AGCCTAAACCAACACATGATACTTA 58.283 36.000 0.00 0.00 0.00 2.24
4110 4153 2.785269 ACTGATAATGGGCTTGGGATGA 59.215 45.455 0.00 0.00 0.00 2.92
4139 4182 2.224793 GGCATTCCCTGATACCCTAACC 60.225 54.545 0.00 0.00 0.00 2.85
4142 4185 2.489528 TCCCTGATACCCTAACCAGG 57.510 55.000 0.00 0.00 44.29 4.45
4148 4191 0.839946 ATACCCTAACCAGGCTGCTG 59.160 55.000 9.56 0.00 41.08 4.41
4182 4225 4.022849 GCCCAAATATCACCTCATGTAAGC 60.023 45.833 0.00 0.00 0.00 3.09
4192 4235 4.154918 CACCTCATGTAAGCTTGAACCTTC 59.845 45.833 9.86 0.00 0.00 3.46
4216 4259 3.518634 TTGCTTGTGTTCCTTTGTTCC 57.481 42.857 0.00 0.00 0.00 3.62
4263 4306 5.474532 TGCCCATAGCTGCAAATATCTAAAG 59.525 40.000 1.02 0.00 44.23 1.85
4264 4307 5.620879 GCCCATAGCTGCAAATATCTAAAGC 60.621 44.000 1.02 0.00 38.99 3.51
4270 4313 6.567959 AGCTGCAAATATCTAAAGCTTTTCC 58.432 36.000 18.47 0.00 37.74 3.13
4275 4318 8.367156 TGCAAATATCTAAAGCTTTTCCTGTTT 58.633 29.630 18.47 10.65 0.00 2.83
4289 4332 7.414540 GCTTTTCCTGTTTATGTGATCTGTAGG 60.415 40.741 0.00 0.00 0.00 3.18
4341 4384 2.008329 CTTCTTCAGCTCATGGACTGC 58.992 52.381 10.11 2.76 33.80 4.40
4371 4414 1.679139 TATGTGCTAATGTGCAGCCC 58.321 50.000 0.00 0.00 44.20 5.19
4407 4450 5.439721 TCATACTTTGGTGATCTCAATGGG 58.560 41.667 14.60 7.47 0.00 4.00
4425 4468 2.525105 GGGGGATTAGGTTTTGCTCA 57.475 50.000 0.00 0.00 0.00 4.26
4520 4563 0.543749 AGTCTATGGGGCTGTTCTGC 59.456 55.000 0.00 0.00 0.00 4.26
4544 4587 7.970061 TGCAATAGATGTAAGTGCTCAAAATTC 59.030 33.333 9.43 0.00 36.18 2.17
4545 4588 7.970061 GCAATAGATGTAAGTGCTCAAAATTCA 59.030 33.333 2.65 0.00 32.43 2.57
4548 4591 7.692460 AGATGTAAGTGCTCAAAATTCATGA 57.308 32.000 0.00 0.00 0.00 3.07
4549 4592 8.289939 AGATGTAAGTGCTCAAAATTCATGAT 57.710 30.769 0.00 0.00 0.00 2.45
4551 4594 8.697846 ATGTAAGTGCTCAAAATTCATGATTG 57.302 30.769 0.00 0.00 0.00 2.67
4552 4595 6.587226 TGTAAGTGCTCAAAATTCATGATTGC 59.413 34.615 0.00 0.00 0.00 3.56
4553 4596 5.401531 AGTGCTCAAAATTCATGATTGCT 57.598 34.783 0.00 0.00 0.00 3.91
4554 4597 6.519679 AGTGCTCAAAATTCATGATTGCTA 57.480 33.333 0.00 0.00 0.00 3.49
4559 4602 9.872721 TGCTCAAAATTCATGATTGCTAATTTA 57.127 25.926 0.00 0.00 32.68 1.40
4573 4617 9.394477 GATTGCTAATTTATTTGTATTCCGGTC 57.606 33.333 0.00 0.00 0.00 4.79
4582 4626 3.581024 TGTATTCCGGTCTGTGTACAC 57.419 47.619 19.36 19.36 0.00 2.90
4618 4662 8.410673 TGTTCTTACTACTGTTCTCTTCATCT 57.589 34.615 0.00 0.00 0.00 2.90
4633 4677 5.903923 TCTTCATCTATGACAGGCCCTATA 58.096 41.667 0.00 0.00 36.36 1.31
4654 4698 7.601886 CCTATATGTAAATTGTCCAGAGCTGAG 59.398 40.741 0.00 0.00 0.00 3.35
4673 4717 4.155709 TGAGTGATCTGAACCTCAACTCT 58.844 43.478 0.00 0.00 31.36 3.24
4705 4749 2.237143 TGAATCCAGGTGTGACATCCTC 59.763 50.000 4.14 0.00 30.91 3.71
4712 4756 3.688185 CAGGTGTGACATCCTCATTCTTG 59.312 47.826 4.14 0.00 30.91 3.02
4713 4757 3.328931 AGGTGTGACATCCTCATTCTTGT 59.671 43.478 0.00 0.00 0.00 3.16
4717 4761 4.520111 TGTGACATCCTCATTCTTGTTTGG 59.480 41.667 0.00 0.00 0.00 3.28
4719 4763 5.705441 GTGACATCCTCATTCTTGTTTGGTA 59.295 40.000 0.00 0.00 0.00 3.25
4720 4764 5.705441 TGACATCCTCATTCTTGTTTGGTAC 59.295 40.000 0.00 0.00 0.00 3.34
4721 4765 5.880901 ACATCCTCATTCTTGTTTGGTACT 58.119 37.500 0.00 0.00 0.00 2.73
4722 4766 5.707298 ACATCCTCATTCTTGTTTGGTACTG 59.293 40.000 0.00 0.00 0.00 2.74
4723 4767 5.560722 TCCTCATTCTTGTTTGGTACTGA 57.439 39.130 0.00 0.00 0.00 3.41
4724 4768 5.935945 TCCTCATTCTTGTTTGGTACTGAA 58.064 37.500 0.00 0.00 0.00 3.02
4725 4769 6.542821 TCCTCATTCTTGTTTGGTACTGAAT 58.457 36.000 0.00 0.00 33.89 2.57
4727 4771 7.040478 TCCTCATTCTTGTTTGGTACTGAATTG 60.040 37.037 0.00 0.00 32.48 2.32
4733 4792 3.509575 TGTTTGGTACTGAATTGGATGCC 59.490 43.478 0.00 0.00 0.00 4.40
4784 4843 5.614324 AGTGCATGAGTATTTACAGCCTA 57.386 39.130 0.00 0.00 0.00 3.93
4791 4850 7.012327 GCATGAGTATTTACAGCCTATGAAACA 59.988 37.037 0.00 0.00 0.00 2.83
4858 4917 0.391661 ATGTCACTGGATGCCGTGAC 60.392 55.000 27.30 27.30 46.90 3.67
4864 4923 0.448990 CTGGATGCCGTGACATGTTG 59.551 55.000 0.00 0.00 0.00 3.33
4905 4964 4.098914 AGGTACTGCTGATTTTCAACCA 57.901 40.909 0.00 0.00 37.18 3.67
4916 4975 2.932855 TTTCAACCACCCGTGTGATA 57.067 45.000 0.00 0.00 45.76 2.15
4923 4982 3.822940 ACCACCCGTGTGATAAGAAAAA 58.177 40.909 0.00 0.00 45.76 1.94
4933 4992 6.073222 CGTGTGATAAGAAAAACCTTAGCTGT 60.073 38.462 0.00 0.00 36.36 4.40
4942 5001 4.670896 AAACCTTAGCTGTTGCAACATT 57.329 36.364 31.17 23.39 42.74 2.71
4958 5017 5.021120 CAACATTAATTGCCAACTTGTGC 57.979 39.130 0.00 0.00 0.00 4.57
4961 5020 3.383620 TTAATTGCCAACTTGTGCCTG 57.616 42.857 0.00 0.00 0.00 4.85
4963 5022 0.963962 ATTGCCAACTTGTGCCTGAG 59.036 50.000 0.00 0.00 0.00 3.35
4964 5023 1.737355 TTGCCAACTTGTGCCTGAGC 61.737 55.000 1.29 0.00 40.48 4.26
4965 5024 1.900498 GCCAACTTGTGCCTGAGCT 60.900 57.895 0.00 0.00 40.80 4.09
4966 5025 1.860484 GCCAACTTGTGCCTGAGCTC 61.860 60.000 6.82 6.82 40.80 4.09
4967 5026 1.239968 CCAACTTGTGCCTGAGCTCC 61.240 60.000 12.15 0.00 40.80 4.70
4968 5027 0.250640 CAACTTGTGCCTGAGCTCCT 60.251 55.000 12.15 0.00 40.80 3.69
4970 5029 2.033141 TTGTGCCTGAGCTCCTGC 59.967 61.111 12.15 14.18 40.80 4.85
4971 5030 2.743126 CTTGTGCCTGAGCTCCTGCA 62.743 60.000 19.83 19.83 42.74 4.41
4972 5031 2.745492 GTGCCTGAGCTCCTGCAC 60.745 66.667 30.07 30.07 46.09 4.57
4974 5033 4.385405 GCCTGAGCTCCTGCACGT 62.385 66.667 12.15 0.00 42.74 4.49
4976 5035 1.140589 CCTGAGCTCCTGCACGTAG 59.859 63.158 12.15 0.00 42.74 3.51
4977 5036 1.518133 CTGAGCTCCTGCACGTAGC 60.518 63.158 12.15 0.00 42.74 3.58
5016 5076 8.271458 TGCCATAATCTTATGTTCCTGTTTCTA 58.729 33.333 8.66 0.00 39.04 2.10
5053 5113 6.494835 ACTCTAAATTTTGCCAGGTTCTGAAT 59.505 34.615 0.00 0.00 32.44 2.57
5067 5127 2.156917 TCTGAATGAGTTTGCAGCAGG 58.843 47.619 0.00 0.00 0.00 4.85
5125 5185 3.553095 GAAGCGGGTGCAAGTCCCT 62.553 63.158 9.08 0.00 46.23 4.20
5128 5188 2.046892 CGGGTGCAAGTCCCTCAG 60.047 66.667 9.08 0.00 42.56 3.35
5136 5196 1.457346 CAAGTCCCTCAGTTCATGCC 58.543 55.000 0.00 0.00 0.00 4.40
5173 5233 2.911509 ACCTGCAATGCCGCAACA 60.912 55.556 1.53 0.00 42.45 3.33
5177 5237 2.126346 GCAATGCCGCAACACTCC 60.126 61.111 0.00 0.00 0.00 3.85
5184 5244 2.046285 CCGCAACACTCCCCAATCC 61.046 63.158 0.00 0.00 0.00 3.01
5185 5245 1.303236 CGCAACACTCCCCAATCCA 60.303 57.895 0.00 0.00 0.00 3.41
5188 5248 1.247567 CAACACTCCCCAATCCACAC 58.752 55.000 0.00 0.00 0.00 3.82
5193 5253 2.361104 CCCCAATCCACACCCACG 60.361 66.667 0.00 0.00 0.00 4.94
5195 5255 1.674322 CCCAATCCACACCCACGTC 60.674 63.158 0.00 0.00 0.00 4.34
5198 5258 1.604604 CAATCCACACCCACGTCTTT 58.395 50.000 0.00 0.00 0.00 2.52
5199 5259 2.551287 CCAATCCACACCCACGTCTTTA 60.551 50.000 0.00 0.00 0.00 1.85
5200 5260 2.467566 ATCCACACCCACGTCTTTAC 57.532 50.000 0.00 0.00 0.00 2.01
5212 5272 3.788434 CGTCTTTACGCAGTGTTGATT 57.212 42.857 0.00 0.00 45.73 2.57
5213 5273 3.722123 CGTCTTTACGCAGTGTTGATTC 58.278 45.455 0.00 0.00 45.73 2.52
5214 5274 3.183574 CGTCTTTACGCAGTGTTGATTCA 59.816 43.478 0.00 0.00 45.73 2.57
5215 5275 4.143115 CGTCTTTACGCAGTGTTGATTCAT 60.143 41.667 0.00 0.00 45.73 2.57
5216 5276 5.614668 CGTCTTTACGCAGTGTTGATTCATT 60.615 40.000 0.00 0.00 45.73 2.57
5217 5277 5.565259 GTCTTTACGCAGTGTTGATTCATTG 59.435 40.000 0.00 0.00 45.73 2.82
5218 5278 2.336554 ACGCAGTGTTGATTCATTGC 57.663 45.000 4.54 4.54 42.51 3.56
5226 5286 4.454847 AGTGTTGATTCATTGCTCTCTGTG 59.545 41.667 0.00 0.00 0.00 3.66
5227 5287 4.214971 GTGTTGATTCATTGCTCTCTGTGT 59.785 41.667 0.00 0.00 0.00 3.72
5230 5290 5.411831 TGATTCATTGCTCTCTGTGTACT 57.588 39.130 0.00 0.00 0.00 2.73
5247 5307 5.105752 GTGTACTCTGATCACTCACATTCC 58.894 45.833 0.00 0.00 0.00 3.01
5248 5308 4.772100 TGTACTCTGATCACTCACATTCCA 59.228 41.667 0.00 0.00 0.00 3.53
5250 5310 6.607198 TGTACTCTGATCACTCACATTCCATA 59.393 38.462 0.00 0.00 0.00 2.74
5255 5315 6.053632 TGATCACTCACATTCCATAACTGT 57.946 37.500 0.00 0.00 0.00 3.55
5477 5539 2.563179 CTGAGCCTACTGGTGTTGTAGT 59.437 50.000 0.00 0.00 36.56 2.73
5479 5541 4.154176 TGAGCCTACTGGTGTTGTAGTAA 58.846 43.478 0.00 0.00 36.56 2.24
5480 5542 4.589798 TGAGCCTACTGGTGTTGTAGTAAA 59.410 41.667 0.00 0.00 36.56 2.01
5485 5547 6.071728 GCCTACTGGTGTTGTAGTAAACTCTA 60.072 42.308 0.00 0.00 36.56 2.43
5486 5548 7.311408 CCTACTGGTGTTGTAGTAAACTCTAC 58.689 42.308 0.00 0.00 40.22 2.59
5487 5549 6.094193 ACTGGTGTTGTAGTAAACTCTACC 57.906 41.667 0.00 0.00 39.39 3.18
5503 5565 4.583489 ACTCTACCGTTCTTGTTTCTCTGA 59.417 41.667 0.00 0.00 0.00 3.27
5569 5631 4.226394 ACAATAAGGGCATGGTGTAGTGTA 59.774 41.667 0.00 0.00 0.00 2.90
5604 5667 6.183360 CCCTTGGTTCATCCTGGAAAATAATC 60.183 42.308 0.00 0.00 37.07 1.75
5605 5668 6.608808 CCTTGGTTCATCCTGGAAAATAATCT 59.391 38.462 0.00 0.00 37.07 2.40
5722 5976 0.954452 AACTGTAAGCCTGCAAGTGC 59.046 50.000 0.00 0.00 37.60 4.40
5724 5978 1.546323 ACTGTAAGCCTGCAAGTGCAT 60.546 47.619 6.41 0.00 45.13 3.96
5847 6101 0.768221 TGGGAAGTTCCACCTGCTCT 60.768 55.000 23.33 0.00 38.64 4.09
6044 6303 3.449227 ACGCGCTCCTCGATCCAA 61.449 61.111 5.73 0.00 41.67 3.53
6072 6331 0.036164 CATGGAGTTGTCGGGTTCCA 59.964 55.000 0.00 0.00 43.36 3.53
6129 6388 3.854669 CGCCGGCTGATCTTCCCT 61.855 66.667 26.68 0.00 0.00 4.20
6172 6438 4.041075 GTGATCTATCCCCCTTCTCTTTCC 59.959 50.000 0.00 0.00 0.00 3.13
6190 6456 1.070445 CCATCTTCCCGGCTAGCAG 59.930 63.158 18.24 13.09 0.00 4.24
6285 6580 2.177394 TTGCTCTGCATACGGTTGAA 57.823 45.000 0.00 0.00 38.76 2.69
6333 6628 5.491982 ACTGATTCTACAAACCATGTCTCC 58.508 41.667 0.00 0.00 42.70 3.71
6342 6637 4.164221 ACAAACCATGTCTCCGATTATCCT 59.836 41.667 0.00 0.00 37.96 3.24
6346 6641 2.890808 TGTCTCCGATTATCCTGCAC 57.109 50.000 0.00 0.00 0.00 4.57
6377 6672 2.634815 CTGCAGTCAGGCTGGATTAT 57.365 50.000 15.73 0.00 44.57 1.28
6378 6673 2.928334 CTGCAGTCAGGCTGGATTATT 58.072 47.619 15.73 0.00 44.57 1.40
6379 6674 4.077300 CTGCAGTCAGGCTGGATTATTA 57.923 45.455 15.73 0.00 44.57 0.98
6380 6675 4.649692 CTGCAGTCAGGCTGGATTATTAT 58.350 43.478 15.73 0.00 44.57 1.28
6381 6676 4.645535 TGCAGTCAGGCTGGATTATTATC 58.354 43.478 15.73 0.00 45.14 1.75
6382 6677 6.316499 CTGCAGTCAGGCTGGATTATTATCC 61.316 48.000 15.73 3.68 44.57 2.59
6383 6678 8.649590 CTGCAGTCAGGCTGGATTATTATCCA 62.650 46.154 15.73 12.69 45.26 3.41
6384 6679 9.854474 CTGCAGTCAGGCTGGATTATTATCCAT 62.854 44.444 15.73 0.00 45.70 3.41
6476 6771 6.650427 TGTGCTACTTCGATCCATATTACT 57.350 37.500 0.00 0.00 0.00 2.24
6477 6772 7.754851 TGTGCTACTTCGATCCATATTACTA 57.245 36.000 0.00 0.00 0.00 1.82
6478 6773 7.591165 TGTGCTACTTCGATCCATATTACTAC 58.409 38.462 0.00 0.00 0.00 2.73
6519 6814 9.315525 GTACAAAGTTGAGGGAGTATCTATTTC 57.684 37.037 0.00 0.00 33.73 2.17
6525 6820 9.890915 AGTTGAGGGAGTATCTATTTCTCTTAT 57.109 33.333 0.00 0.00 33.73 1.73
6540 6835 7.426929 TTTCTCTTATCTGTCTTTGCTGAAC 57.573 36.000 0.00 0.00 0.00 3.18
6560 6855 1.153958 GCTCAAAGGCGCAATGTCC 60.154 57.895 10.83 0.00 0.00 4.02
6595 6890 9.213777 TCAGGATACATATCTTGTAGGAGTTTT 57.786 33.333 9.95 0.00 43.87 2.43
6622 6917 0.040067 GAAGCAAAGTGACCAAGGCG 60.040 55.000 0.00 0.00 0.00 5.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.978489 GACGACGTCTAGGTCTTTGTTG 59.022 50.000 20.52 0.00 34.75 3.33
1 2 2.350197 CGACGACGTCTAGGTCTTTGTT 60.350 50.000 24.36 0.00 34.75 2.83
2 3 1.196354 CGACGACGTCTAGGTCTTTGT 59.804 52.381 24.36 0.00 34.75 2.83
3 4 1.879646 CGACGACGTCTAGGTCTTTG 58.120 55.000 24.36 3.10 34.75 2.77
15 16 3.180189 TGTTTACTAAAGCAACGACGACG 59.820 43.478 5.58 5.58 45.75 5.12
16 17 4.440068 GTGTTTACTAAAGCAACGACGAC 58.560 43.478 0.00 0.00 0.00 4.34
17 18 3.490526 GGTGTTTACTAAAGCAACGACGA 59.509 43.478 0.00 0.00 0.00 4.20
18 19 3.245754 TGGTGTTTACTAAAGCAACGACG 59.754 43.478 0.00 0.00 36.39 5.12
19 20 4.799419 TGGTGTTTACTAAAGCAACGAC 57.201 40.909 0.00 0.00 36.39 4.34
20 21 7.675962 AATATGGTGTTTACTAAAGCAACGA 57.324 32.000 0.00 0.00 36.39 3.85
21 22 9.828852 TTTAATATGGTGTTTACTAAAGCAACG 57.171 29.630 0.00 0.00 36.39 4.10
80 81 9.284968 CCACCCGATAATAAAGATCAAACTAAT 57.715 33.333 0.00 0.00 0.00 1.73
81 82 8.487848 TCCACCCGATAATAAAGATCAAACTAA 58.512 33.333 0.00 0.00 0.00 2.24
82 83 8.025270 TCCACCCGATAATAAAGATCAAACTA 57.975 34.615 0.00 0.00 0.00 2.24
83 84 6.895782 TCCACCCGATAATAAAGATCAAACT 58.104 36.000 0.00 0.00 0.00 2.66
84 85 7.584987 CATCCACCCGATAATAAAGATCAAAC 58.415 38.462 0.00 0.00 0.00 2.93
85 86 6.206634 GCATCCACCCGATAATAAAGATCAAA 59.793 38.462 0.00 0.00 0.00 2.69
86 87 5.705441 GCATCCACCCGATAATAAAGATCAA 59.295 40.000 0.00 0.00 0.00 2.57
87 88 5.221823 TGCATCCACCCGATAATAAAGATCA 60.222 40.000 0.00 0.00 0.00 2.92
88 89 5.245531 TGCATCCACCCGATAATAAAGATC 58.754 41.667 0.00 0.00 0.00 2.75
89 90 5.241403 TGCATCCACCCGATAATAAAGAT 57.759 39.130 0.00 0.00 0.00 2.40
90 91 4.698201 TGCATCCACCCGATAATAAAGA 57.302 40.909 0.00 0.00 0.00 2.52
91 92 5.473162 TCATTGCATCCACCCGATAATAAAG 59.527 40.000 0.00 0.00 0.00 1.85
92 93 5.380900 TCATTGCATCCACCCGATAATAAA 58.619 37.500 0.00 0.00 0.00 1.40
93 94 4.979335 TCATTGCATCCACCCGATAATAA 58.021 39.130 0.00 0.00 0.00 1.40
94 95 4.632327 TCATTGCATCCACCCGATAATA 57.368 40.909 0.00 0.00 0.00 0.98
95 96 3.507162 TCATTGCATCCACCCGATAAT 57.493 42.857 0.00 0.00 0.00 1.28
96 97 3.118075 TCTTCATTGCATCCACCCGATAA 60.118 43.478 0.00 0.00 0.00 1.75
97 98 2.437651 TCTTCATTGCATCCACCCGATA 59.562 45.455 0.00 0.00 0.00 2.92
98 99 1.212688 TCTTCATTGCATCCACCCGAT 59.787 47.619 0.00 0.00 0.00 4.18
99 100 0.617935 TCTTCATTGCATCCACCCGA 59.382 50.000 0.00 0.00 0.00 5.14
100 101 1.462616 TTCTTCATTGCATCCACCCG 58.537 50.000 0.00 0.00 0.00 5.28
101 102 4.828939 TCATATTCTTCATTGCATCCACCC 59.171 41.667 0.00 0.00 0.00 4.61
102 103 6.208007 TCATCATATTCTTCATTGCATCCACC 59.792 38.462 0.00 0.00 0.00 4.61
103 104 7.210718 TCATCATATTCTTCATTGCATCCAC 57.789 36.000 0.00 0.00 0.00 4.02
104 105 7.504574 AGTTCATCATATTCTTCATTGCATCCA 59.495 33.333 0.00 0.00 0.00 3.41
105 106 7.883217 AGTTCATCATATTCTTCATTGCATCC 58.117 34.615 0.00 0.00 0.00 3.51
114 115 9.890352 GCTTGGAAATAGTTCATCATATTCTTC 57.110 33.333 5.15 0.00 35.25 2.87
115 116 9.412460 TGCTTGGAAATAGTTCATCATATTCTT 57.588 29.630 5.15 0.00 35.25 2.52
116 117 8.985315 TGCTTGGAAATAGTTCATCATATTCT 57.015 30.769 5.15 0.00 35.25 2.40
119 120 9.458727 CCTATGCTTGGAAATAGTTCATCATAT 57.541 33.333 5.15 0.00 35.25 1.78
120 121 7.884877 CCCTATGCTTGGAAATAGTTCATCATA 59.115 37.037 5.15 5.65 35.25 2.15
121 122 6.718454 CCCTATGCTTGGAAATAGTTCATCAT 59.282 38.462 5.15 4.86 35.25 2.45
122 123 6.064060 CCCTATGCTTGGAAATAGTTCATCA 58.936 40.000 5.15 0.00 35.25 3.07
123 124 6.064717 ACCCTATGCTTGGAAATAGTTCATC 58.935 40.000 5.15 0.00 35.25 2.92
124 125 6.018433 ACCCTATGCTTGGAAATAGTTCAT 57.982 37.500 5.15 0.00 35.25 2.57
125 126 5.450818 ACCCTATGCTTGGAAATAGTTCA 57.549 39.130 5.15 0.00 35.25 3.18
126 127 5.067805 CCAACCCTATGCTTGGAAATAGTTC 59.932 44.000 0.00 0.00 39.58 3.01
127 128 4.956075 CCAACCCTATGCTTGGAAATAGTT 59.044 41.667 0.00 0.00 39.58 2.24
128 129 4.536765 CCAACCCTATGCTTGGAAATAGT 58.463 43.478 0.00 0.00 39.58 2.12
129 130 3.891366 CCCAACCCTATGCTTGGAAATAG 59.109 47.826 1.88 0.00 39.58 1.73
130 131 3.270960 ACCCAACCCTATGCTTGGAAATA 59.729 43.478 1.88 0.00 39.58 1.40
131 132 2.044353 ACCCAACCCTATGCTTGGAAAT 59.956 45.455 1.88 0.00 39.58 2.17
132 133 1.431243 ACCCAACCCTATGCTTGGAAA 59.569 47.619 1.88 0.00 39.58 3.13
133 134 1.080638 ACCCAACCCTATGCTTGGAA 58.919 50.000 1.88 0.00 39.58 3.53
134 135 0.331278 CACCCAACCCTATGCTTGGA 59.669 55.000 1.88 0.00 39.58 3.53
135 136 0.684153 CCACCCAACCCTATGCTTGG 60.684 60.000 0.00 0.00 37.30 3.61
136 137 0.331278 TCCACCCAACCCTATGCTTG 59.669 55.000 0.00 0.00 0.00 4.01
137 138 1.080638 TTCCACCCAACCCTATGCTT 58.919 50.000 0.00 0.00 0.00 3.91
138 139 0.331616 GTTCCACCCAACCCTATGCT 59.668 55.000 0.00 0.00 0.00 3.79
139 140 0.683179 GGTTCCACCCAACCCTATGC 60.683 60.000 0.00 0.00 40.18 3.14
140 141 0.701731 TGGTTCCACCCAACCCTATG 59.298 55.000 0.00 0.00 44.82 2.23
141 142 1.693799 ATGGTTCCACCCAACCCTAT 58.306 50.000 0.00 0.00 44.82 2.57
142 143 2.309458 GTTATGGTTCCACCCAACCCTA 59.691 50.000 0.00 0.00 44.82 3.53
143 144 1.076513 GTTATGGTTCCACCCAACCCT 59.923 52.381 0.00 0.00 44.82 4.34
144 145 1.076513 AGTTATGGTTCCACCCAACCC 59.923 52.381 0.00 0.00 44.82 4.11
145 146 2.443416 GAGTTATGGTTCCACCCAACC 58.557 52.381 0.00 0.00 45.54 3.77
146 147 2.443416 GGAGTTATGGTTCCACCCAAC 58.557 52.381 0.00 0.00 37.50 3.77
147 148 1.003812 CGGAGTTATGGTTCCACCCAA 59.996 52.381 0.00 0.00 37.50 4.12
148 149 0.616371 CGGAGTTATGGTTCCACCCA 59.384 55.000 0.00 0.00 37.50 4.51
149 150 0.616891 ACGGAGTTATGGTTCCACCC 59.383 55.000 0.00 0.00 37.78 4.61
163 164 1.825474 ACCATCTGACACCTAACGGAG 59.175 52.381 0.00 0.00 0.00 4.63
164 165 1.548719 CACCATCTGACACCTAACGGA 59.451 52.381 0.00 0.00 0.00 4.69
165 166 1.275291 ACACCATCTGACACCTAACGG 59.725 52.381 0.00 0.00 0.00 4.44
166 167 2.736721 CAACACCATCTGACACCTAACG 59.263 50.000 0.00 0.00 0.00 3.18
167 168 2.484264 GCAACACCATCTGACACCTAAC 59.516 50.000 0.00 0.00 0.00 2.34
168 169 2.778299 GCAACACCATCTGACACCTAA 58.222 47.619 0.00 0.00 0.00 2.69
169 170 1.337728 CGCAACACCATCTGACACCTA 60.338 52.381 0.00 0.00 0.00 3.08
170 171 0.603707 CGCAACACCATCTGACACCT 60.604 55.000 0.00 0.00 0.00 4.00
171 172 1.577328 CCGCAACACCATCTGACACC 61.577 60.000 0.00 0.00 0.00 4.16
172 173 0.884704 ACCGCAACACCATCTGACAC 60.885 55.000 0.00 0.00 0.00 3.67
173 174 0.602638 GACCGCAACACCATCTGACA 60.603 55.000 0.00 0.00 0.00 3.58
174 175 1.298859 GGACCGCAACACCATCTGAC 61.299 60.000 0.00 0.00 0.00 3.51
175 176 1.003839 GGACCGCAACACCATCTGA 60.004 57.895 0.00 0.00 0.00 3.27
176 177 1.003355 AGGACCGCAACACCATCTG 60.003 57.895 0.00 0.00 0.00 2.90
177 178 1.003355 CAGGACCGCAACACCATCT 60.003 57.895 0.00 0.00 0.00 2.90
178 179 2.690778 GCAGGACCGCAACACCATC 61.691 63.158 3.82 0.00 0.00 3.51
179 180 1.836999 TAGCAGGACCGCAACACCAT 61.837 55.000 10.28 0.00 0.00 3.55
180 181 2.046009 TTAGCAGGACCGCAACACCA 62.046 55.000 10.28 0.00 0.00 4.17
181 182 0.887387 TTTAGCAGGACCGCAACACC 60.887 55.000 10.28 0.00 0.00 4.16
182 183 1.135689 CATTTAGCAGGACCGCAACAC 60.136 52.381 10.28 0.00 0.00 3.32
183 184 1.164411 CATTTAGCAGGACCGCAACA 58.836 50.000 10.28 0.00 0.00 3.33
184 185 1.130561 GACATTTAGCAGGACCGCAAC 59.869 52.381 10.28 0.00 0.00 4.17
185 186 1.003118 AGACATTTAGCAGGACCGCAA 59.997 47.619 10.28 0.00 0.00 4.85
186 187 0.613260 AGACATTTAGCAGGACCGCA 59.387 50.000 10.28 0.00 0.00 5.69
187 188 1.666189 GAAGACATTTAGCAGGACCGC 59.334 52.381 0.68 0.68 0.00 5.68
188 189 2.093447 AGGAAGACATTTAGCAGGACCG 60.093 50.000 0.00 0.00 0.00 4.79
189 190 3.636153 AGGAAGACATTTAGCAGGACC 57.364 47.619 0.00 0.00 0.00 4.46
190 191 4.762251 ACAAAGGAAGACATTTAGCAGGAC 59.238 41.667 0.00 0.00 0.00 3.85
191 192 4.985538 ACAAAGGAAGACATTTAGCAGGA 58.014 39.130 0.00 0.00 0.00 3.86
192 193 5.712152 AACAAAGGAAGACATTTAGCAGG 57.288 39.130 0.00 0.00 0.00 4.85
193 194 8.273780 AGATAACAAAGGAAGACATTTAGCAG 57.726 34.615 0.00 0.00 0.00 4.24
194 195 8.514594 CAAGATAACAAAGGAAGACATTTAGCA 58.485 33.333 0.00 0.00 0.00 3.49
195 196 7.970614 CCAAGATAACAAAGGAAGACATTTAGC 59.029 37.037 0.00 0.00 0.00 3.09
196 197 9.014297 ACCAAGATAACAAAGGAAGACATTTAG 57.986 33.333 0.00 0.00 0.00 1.85
197 198 8.934023 ACCAAGATAACAAAGGAAGACATTTA 57.066 30.769 0.00 0.00 0.00 1.40
198 199 7.839680 ACCAAGATAACAAAGGAAGACATTT 57.160 32.000 0.00 0.00 0.00 2.32
199 200 7.308589 CGAACCAAGATAACAAAGGAAGACATT 60.309 37.037 0.00 0.00 0.00 2.71
200 201 6.149474 CGAACCAAGATAACAAAGGAAGACAT 59.851 38.462 0.00 0.00 0.00 3.06
201 202 5.468746 CGAACCAAGATAACAAAGGAAGACA 59.531 40.000 0.00 0.00 0.00 3.41
202 203 5.106673 CCGAACCAAGATAACAAAGGAAGAC 60.107 44.000 0.00 0.00 0.00 3.01
203 204 5.001232 CCGAACCAAGATAACAAAGGAAGA 58.999 41.667 0.00 0.00 0.00 2.87
204 205 4.760204 ACCGAACCAAGATAACAAAGGAAG 59.240 41.667 0.00 0.00 0.00 3.46
205 206 4.721132 ACCGAACCAAGATAACAAAGGAA 58.279 39.130 0.00 0.00 0.00 3.36
206 207 4.360951 ACCGAACCAAGATAACAAAGGA 57.639 40.909 0.00 0.00 0.00 3.36
207 208 4.517453 TGAACCGAACCAAGATAACAAAGG 59.483 41.667 0.00 0.00 0.00 3.11
208 209 5.682943 TGAACCGAACCAAGATAACAAAG 57.317 39.130 0.00 0.00 0.00 2.77
209 210 6.642707 ATTGAACCGAACCAAGATAACAAA 57.357 33.333 0.00 0.00 0.00 2.83
210 211 6.938030 AGTATTGAACCGAACCAAGATAACAA 59.062 34.615 0.00 0.00 0.00 2.83
211 212 6.469410 AGTATTGAACCGAACCAAGATAACA 58.531 36.000 0.00 0.00 0.00 2.41
212 213 6.980051 AGTATTGAACCGAACCAAGATAAC 57.020 37.500 0.00 0.00 0.00 1.89
213 214 7.391620 AGAAGTATTGAACCGAACCAAGATAA 58.608 34.615 0.00 0.00 0.00 1.75
214 215 6.942976 AGAAGTATTGAACCGAACCAAGATA 58.057 36.000 0.00 0.00 0.00 1.98
215 216 5.805728 AGAAGTATTGAACCGAACCAAGAT 58.194 37.500 0.00 0.00 0.00 2.40
216 217 5.223449 AGAAGTATTGAACCGAACCAAGA 57.777 39.130 0.00 0.00 0.00 3.02
217 218 5.941948 AAGAAGTATTGAACCGAACCAAG 57.058 39.130 0.00 0.00 0.00 3.61
218 219 6.428771 CCTTAAGAAGTATTGAACCGAACCAA 59.571 38.462 3.36 0.00 0.00 3.67
219 220 5.935789 CCTTAAGAAGTATTGAACCGAACCA 59.064 40.000 3.36 0.00 0.00 3.67
220 221 6.168389 TCCTTAAGAAGTATTGAACCGAACC 58.832 40.000 3.36 0.00 0.00 3.62
221 222 7.662604 TTCCTTAAGAAGTATTGAACCGAAC 57.337 36.000 3.36 0.00 0.00 3.95
222 223 8.680039 TTTTCCTTAAGAAGTATTGAACCGAA 57.320 30.769 3.36 0.00 35.40 4.30
223 224 8.857694 ATTTTCCTTAAGAAGTATTGAACCGA 57.142 30.769 3.36 0.00 35.40 4.69
233 234 9.930693 CTCAGTGTACTATTTTCCTTAAGAAGT 57.069 33.333 3.36 0.71 35.40 3.01
234 235 8.874816 GCTCAGTGTACTATTTTCCTTAAGAAG 58.125 37.037 3.36 0.00 35.40 2.85
235 236 7.822822 GGCTCAGTGTACTATTTTCCTTAAGAA 59.177 37.037 3.36 0.00 0.00 2.52
236 237 7.328737 GGCTCAGTGTACTATTTTCCTTAAGA 58.671 38.462 3.36 0.00 0.00 2.10
237 238 6.255887 CGGCTCAGTGTACTATTTTCCTTAAG 59.744 42.308 0.00 0.00 0.00 1.85
238 239 6.103997 CGGCTCAGTGTACTATTTTCCTTAA 58.896 40.000 0.00 0.00 0.00 1.85
239 240 5.394883 CCGGCTCAGTGTACTATTTTCCTTA 60.395 44.000 0.00 0.00 0.00 2.69
240 241 4.504858 CGGCTCAGTGTACTATTTTCCTT 58.495 43.478 0.00 0.00 0.00 3.36
241 242 3.118738 CCGGCTCAGTGTACTATTTTCCT 60.119 47.826 0.00 0.00 0.00 3.36
242 243 3.195661 CCGGCTCAGTGTACTATTTTCC 58.804 50.000 0.00 0.00 0.00 3.13
243 244 3.858247 ACCGGCTCAGTGTACTATTTTC 58.142 45.455 0.00 0.00 0.00 2.29
244 245 3.975168 ACCGGCTCAGTGTACTATTTT 57.025 42.857 0.00 0.00 0.00 1.82
245 246 4.739735 GCATACCGGCTCAGTGTACTATTT 60.740 45.833 0.00 0.00 0.00 1.40
246 247 3.243771 GCATACCGGCTCAGTGTACTATT 60.244 47.826 0.00 0.00 0.00 1.73
247 248 2.296471 GCATACCGGCTCAGTGTACTAT 59.704 50.000 0.00 0.00 0.00 2.12
248 249 1.679680 GCATACCGGCTCAGTGTACTA 59.320 52.381 0.00 0.00 0.00 1.82
249 250 0.460311 GCATACCGGCTCAGTGTACT 59.540 55.000 0.00 0.00 0.00 2.73
250 251 0.460311 AGCATACCGGCTCAGTGTAC 59.540 55.000 0.00 0.00 41.05 2.90
251 252 1.134818 CAAGCATACCGGCTCAGTGTA 60.135 52.381 0.00 0.00 45.07 2.90
252 253 0.391661 CAAGCATACCGGCTCAGTGT 60.392 55.000 0.00 0.00 45.07 3.55
253 254 1.709147 GCAAGCATACCGGCTCAGTG 61.709 60.000 0.00 0.00 45.07 3.66
254 255 1.450312 GCAAGCATACCGGCTCAGT 60.450 57.895 0.00 0.00 45.07 3.41
255 256 1.153289 AGCAAGCATACCGGCTCAG 60.153 57.895 0.00 0.00 45.07 3.35
256 257 1.450134 CAGCAAGCATACCGGCTCA 60.450 57.895 0.00 0.00 45.07 4.26
257 258 2.182842 CCAGCAAGCATACCGGCTC 61.183 63.158 0.00 0.00 45.07 4.70
259 260 3.892581 GCCAGCAAGCATACCGGC 61.893 66.667 0.00 0.00 0.00 6.13
260 261 3.211963 GGCCAGCAAGCATACCGG 61.212 66.667 0.00 0.00 0.00 5.28
261 262 3.576356 CGGCCAGCAAGCATACCG 61.576 66.667 2.24 5.50 0.00 4.02
262 263 2.438434 ACGGCCAGCAAGCATACC 60.438 61.111 2.24 0.00 0.00 2.73
263 264 1.097547 ATGACGGCCAGCAAGCATAC 61.098 55.000 2.24 0.00 0.00 2.39
264 265 1.096967 CATGACGGCCAGCAAGCATA 61.097 55.000 2.24 0.00 0.00 3.14
265 266 2.044650 ATGACGGCCAGCAAGCAT 60.045 55.556 2.24 0.00 0.00 3.79
266 267 3.057548 CATGACGGCCAGCAAGCA 61.058 61.111 2.24 0.00 0.00 3.91
267 268 3.818787 CCATGACGGCCAGCAAGC 61.819 66.667 2.24 0.00 0.00 4.01
268 269 2.046023 TCCATGACGGCCAGCAAG 60.046 61.111 2.24 0.00 33.14 4.01
269 270 2.359850 GTCCATGACGGCCAGCAA 60.360 61.111 2.24 0.00 33.14 3.91
270 271 4.408821 GGTCCATGACGGCCAGCA 62.409 66.667 2.24 0.00 32.65 4.41
271 272 2.044806 ATAGGTCCATGACGGCCAGC 62.045 60.000 2.24 0.00 34.39 4.85
272 273 1.338107 TATAGGTCCATGACGGCCAG 58.662 55.000 2.24 0.00 34.39 4.85
273 274 1.623311 CATATAGGTCCATGACGGCCA 59.377 52.381 2.24 0.00 34.39 5.36
274 275 1.676014 GCATATAGGTCCATGACGGCC 60.676 57.143 0.00 0.00 32.65 6.13
275 276 1.001974 TGCATATAGGTCCATGACGGC 59.998 52.381 0.00 0.00 32.65 5.68
276 277 2.300152 AGTGCATATAGGTCCATGACGG 59.700 50.000 0.00 0.00 32.65 4.79
277 278 3.667497 AGTGCATATAGGTCCATGACG 57.333 47.619 0.00 0.00 32.65 4.35
278 279 5.368145 TCAAAGTGCATATAGGTCCATGAC 58.632 41.667 0.00 0.00 0.00 3.06
279 280 5.366477 TCTCAAAGTGCATATAGGTCCATGA 59.634 40.000 0.00 0.00 0.00 3.07
280 281 5.614308 TCTCAAAGTGCATATAGGTCCATG 58.386 41.667 0.00 0.00 0.00 3.66
281 282 5.221803 CCTCTCAAAGTGCATATAGGTCCAT 60.222 44.000 0.00 0.00 0.00 3.41
282 283 4.101585 CCTCTCAAAGTGCATATAGGTCCA 59.898 45.833 0.00 0.00 0.00 4.02
283 284 4.101741 ACCTCTCAAAGTGCATATAGGTCC 59.898 45.833 0.00 0.00 30.31 4.46
284 285 5.053145 CACCTCTCAAAGTGCATATAGGTC 58.947 45.833 0.00 0.00 33.90 3.85
285 286 5.028549 CACCTCTCAAAGTGCATATAGGT 57.971 43.478 0.00 0.00 36.55 3.08
294 295 4.696877 TGATGTATTGCACCTCTCAAAGTG 59.303 41.667 0.00 0.00 37.05 3.16
295 296 4.697352 GTGATGTATTGCACCTCTCAAAGT 59.303 41.667 0.00 0.00 0.00 2.66
296 297 5.227238 GTGATGTATTGCACCTCTCAAAG 57.773 43.478 0.00 0.00 0.00 2.77
305 306 2.094258 CGTCACTGGTGATGTATTGCAC 59.906 50.000 13.09 0.00 42.18 4.57
306 307 2.345876 CGTCACTGGTGATGTATTGCA 58.654 47.619 13.09 0.00 42.18 4.08
321 322 4.599047 CTTGTATAGCTAGTGGACGTCAC 58.401 47.826 18.91 13.33 46.39 3.67
322 323 3.066342 GCTTGTATAGCTAGTGGACGTCA 59.934 47.826 18.91 0.27 46.77 4.35
323 324 3.630101 GCTTGTATAGCTAGTGGACGTC 58.370 50.000 7.13 7.13 46.77 4.34
324 325 3.712091 GCTTGTATAGCTAGTGGACGT 57.288 47.619 0.00 0.00 46.77 4.34
335 336 2.710377 TGGCTGTGTTGGCTTGTATAG 58.290 47.619 0.00 0.00 0.00 1.31
336 337 2.817258 GTTGGCTGTGTTGGCTTGTATA 59.183 45.455 0.00 0.00 0.00 1.47
337 338 1.613437 GTTGGCTGTGTTGGCTTGTAT 59.387 47.619 0.00 0.00 0.00 2.29
338 339 1.028905 GTTGGCTGTGTTGGCTTGTA 58.971 50.000 0.00 0.00 0.00 2.41
339 340 0.969917 TGTTGGCTGTGTTGGCTTGT 60.970 50.000 0.00 0.00 0.00 3.16
340 341 0.390124 ATGTTGGCTGTGTTGGCTTG 59.610 50.000 0.00 0.00 0.00 4.01
341 342 0.390124 CATGTTGGCTGTGTTGGCTT 59.610 50.000 0.00 0.00 0.00 4.35
342 343 2.043625 CATGTTGGCTGTGTTGGCT 58.956 52.632 0.00 0.00 0.00 4.75
343 344 1.665599 GCATGTTGGCTGTGTTGGC 60.666 57.895 0.00 0.00 0.00 4.52
344 345 1.005867 GGCATGTTGGCTGTGTTGG 60.006 57.895 0.00 0.00 40.14 3.77
345 346 0.319211 CTGGCATGTTGGCTGTGTTG 60.319 55.000 2.66 0.00 44.10 3.33
346 347 2.043625 CTGGCATGTTGGCTGTGTT 58.956 52.632 2.66 0.00 44.10 3.32
347 348 3.767816 CTGGCATGTTGGCTGTGT 58.232 55.556 2.66 0.00 44.10 3.72
350 351 3.501062 CAGATATACTGGCATGTTGGCTG 59.499 47.826 6.43 6.43 44.10 4.85
351 352 3.392285 TCAGATATACTGGCATGTTGGCT 59.608 43.478 2.66 0.00 45.76 4.75
352 353 3.743521 TCAGATATACTGGCATGTTGGC 58.256 45.455 0.00 0.00 45.76 4.52
361 362 4.984785 CGTTGGACATGTCAGATATACTGG 59.015 45.833 26.47 1.58 45.76 4.00
362 363 5.592054 ACGTTGGACATGTCAGATATACTG 58.408 41.667 26.47 8.81 46.97 2.74
363 364 5.854010 ACGTTGGACATGTCAGATATACT 57.146 39.130 26.47 0.00 0.00 2.12
364 365 9.856488 ATATTACGTTGGACATGTCAGATATAC 57.144 33.333 26.47 12.90 0.00 1.47
366 367 8.807118 AGATATTACGTTGGACATGTCAGATAT 58.193 33.333 26.47 16.12 0.00 1.63
367 368 8.178313 AGATATTACGTTGGACATGTCAGATA 57.822 34.615 26.47 12.80 0.00 1.98
368 369 7.055667 AGATATTACGTTGGACATGTCAGAT 57.944 36.000 26.47 7.49 0.00 2.90
369 370 6.465439 AGATATTACGTTGGACATGTCAGA 57.535 37.500 26.47 11.85 0.00 3.27
370 371 6.510157 GCAAGATATTACGTTGGACATGTCAG 60.510 42.308 26.47 16.16 0.00 3.51
371 372 5.293324 GCAAGATATTACGTTGGACATGTCA 59.707 40.000 26.47 10.65 0.00 3.58
372 373 5.277345 GGCAAGATATTACGTTGGACATGTC 60.277 44.000 17.91 17.91 0.00 3.06
373 374 4.574828 GGCAAGATATTACGTTGGACATGT 59.425 41.667 0.00 0.00 0.00 3.21
374 375 4.024048 GGGCAAGATATTACGTTGGACATG 60.024 45.833 0.00 0.00 0.00 3.21
375 376 4.134563 GGGCAAGATATTACGTTGGACAT 58.865 43.478 0.00 0.00 0.00 3.06
376 377 3.537580 GGGCAAGATATTACGTTGGACA 58.462 45.455 0.00 0.00 0.00 4.02
377 378 2.876550 GGGGCAAGATATTACGTTGGAC 59.123 50.000 0.00 0.00 0.00 4.02
378 379 2.484065 CGGGGCAAGATATTACGTTGGA 60.484 50.000 0.00 0.00 0.00 3.53
379 380 1.871039 CGGGGCAAGATATTACGTTGG 59.129 52.381 0.00 0.00 0.00 3.77
380 381 1.871039 CCGGGGCAAGATATTACGTTG 59.129 52.381 0.00 0.00 0.00 4.10
381 382 1.202722 CCCGGGGCAAGATATTACGTT 60.203 52.381 14.71 0.00 0.00 3.99
382 383 0.395312 CCCGGGGCAAGATATTACGT 59.605 55.000 14.71 0.00 0.00 3.57
383 384 0.321298 CCCCGGGGCAAGATATTACG 60.321 60.000 31.01 0.00 0.00 3.18
384 385 0.037734 CCCCCGGGGCAAGATATTAC 59.962 60.000 36.20 0.00 35.35 1.89
385 386 2.470311 CCCCCGGGGCAAGATATTA 58.530 57.895 36.20 0.00 35.35 0.98
386 387 3.261354 CCCCCGGGGCAAGATATT 58.739 61.111 36.20 0.00 35.35 1.28
396 397 1.563879 TGATGATATATTGCCCCCGGG 59.436 52.381 15.80 15.80 38.57 5.73
397 398 2.239654 ACTGATGATATATTGCCCCCGG 59.760 50.000 0.00 0.00 0.00 5.73
398 399 3.273434 CACTGATGATATATTGCCCCCG 58.727 50.000 0.00 0.00 0.00 5.73
399 400 4.265073 GACACTGATGATATATTGCCCCC 58.735 47.826 0.00 0.00 0.00 5.40
400 401 4.265073 GGACACTGATGATATATTGCCCC 58.735 47.826 0.00 0.00 0.00 5.80
401 402 3.935203 CGGACACTGATGATATATTGCCC 59.065 47.826 0.00 0.00 0.00 5.36
402 403 4.820897 TCGGACACTGATGATATATTGCC 58.179 43.478 0.00 0.00 0.00 4.52
403 404 5.871524 ACATCGGACACTGATGATATATTGC 59.128 40.000 22.12 0.00 44.76 3.56
404 405 7.201384 CGAACATCGGACACTGATGATATATTG 60.201 40.741 22.12 7.34 44.76 1.90
405 406 6.808704 CGAACATCGGACACTGATGATATATT 59.191 38.462 22.12 9.35 44.76 1.28
406 407 6.071896 ACGAACATCGGACACTGATGATATAT 60.072 38.462 22.12 7.17 45.59 0.86
407 408 5.240844 ACGAACATCGGACACTGATGATATA 59.759 40.000 22.12 0.00 45.59 0.86
408 409 4.038042 ACGAACATCGGACACTGATGATAT 59.962 41.667 22.12 10.93 45.59 1.63
409 410 3.380320 ACGAACATCGGACACTGATGATA 59.620 43.478 22.12 0.00 45.59 2.15
410 411 2.166459 ACGAACATCGGACACTGATGAT 59.834 45.455 22.12 13.42 45.59 2.45
411 412 1.544246 ACGAACATCGGACACTGATGA 59.456 47.619 22.12 0.00 45.59 2.92
412 413 1.996292 ACGAACATCGGACACTGATG 58.004 50.000 16.02 16.02 45.59 3.07
413 414 2.743636 AACGAACATCGGACACTGAT 57.256 45.000 4.66 0.00 45.59 2.90
414 415 2.223852 TGAAACGAACATCGGACACTGA 60.224 45.455 4.66 0.00 45.59 3.41
415 416 2.131972 TGAAACGAACATCGGACACTG 58.868 47.619 4.66 0.00 45.59 3.66
416 417 2.519377 TGAAACGAACATCGGACACT 57.481 45.000 4.66 0.00 45.59 3.55
423 424 8.846607 GGTAATGTATTTGTTGAAACGAACATC 58.153 33.333 0.00 0.00 35.77 3.06
429 430 7.932120 TTTGGGTAATGTATTTGTTGAAACG 57.068 32.000 0.00 0.00 0.00 3.60
458 459 4.523083 TCACACTAGCATGGGGTTATTTC 58.477 43.478 0.00 0.00 0.00 2.17
468 469 2.480037 TCGCAGTTTTCACACTAGCATG 59.520 45.455 0.00 0.00 0.00 4.06
470 471 2.232756 TCGCAGTTTTCACACTAGCA 57.767 45.000 0.00 0.00 0.00 3.49
474 475 3.251004 GGAGATTTCGCAGTTTTCACACT 59.749 43.478 0.00 0.00 0.00 3.55
520 528 4.395854 TGAGTGCAGATTACGCAATTTCAT 59.604 37.500 0.00 0.00 41.97 2.57
545 553 4.995487 GGGTGGTGAATATCTTCCGTATTC 59.005 45.833 0.00 0.00 38.46 1.75
712 730 4.745751 TTGGGTTCTACGGCGGCG 62.746 66.667 31.06 31.06 0.00 6.46
713 731 2.358984 TTTGGGTTCTACGGCGGC 60.359 61.111 13.24 0.00 0.00 6.53
714 732 2.036571 GGTTTGGGTTCTACGGCGG 61.037 63.158 13.24 0.00 0.00 6.13
715 733 1.301874 TGGTTTGGGTTCTACGGCG 60.302 57.895 4.80 4.80 0.00 6.46
716 734 1.239296 GGTGGTTTGGGTTCTACGGC 61.239 60.000 0.00 0.00 0.00 5.68
784 802 1.923899 TTTTGGTTCGGTTTTTCGGC 58.076 45.000 0.00 0.00 0.00 5.54
958 976 1.849823 GCTGGGGCTAGGATGGGAT 60.850 63.158 0.00 0.00 35.22 3.85
959 977 2.448542 GCTGGGGCTAGGATGGGA 60.449 66.667 0.00 0.00 35.22 4.37
960 978 3.574237 GGCTGGGGCTAGGATGGG 61.574 72.222 0.00 0.00 38.73 4.00
963 981 4.122670 TGGGGCTGGGGCTAGGAT 62.123 66.667 0.00 0.00 38.73 3.24
964 982 4.823732 CTGGGGCTGGGGCTAGGA 62.824 72.222 0.00 0.00 38.73 2.94
973 991 4.201122 GATCTGGGGCTGGGGCTG 62.201 72.222 0.00 0.00 38.73 4.85
1303 1328 2.268920 CACCACATCCACCCTCGG 59.731 66.667 0.00 0.00 0.00 4.63
1701 1726 4.819630 TGGTGAATTAAGCAAGAACGTTCT 59.180 37.500 24.93 24.93 39.74 3.01
1811 1836 1.726853 GATCAAGGGTCCACAACGAG 58.273 55.000 0.00 0.00 0.00 4.18
1812 1837 0.037697 CGATCAAGGGTCCACAACGA 60.038 55.000 0.00 0.00 0.00 3.85
1867 1897 8.195436 TCTACCATGTCTAAATACCTTTCTTCG 58.805 37.037 0.00 0.00 0.00 3.79
1880 1910 8.944138 TCCATTTCCAATATCTACCATGTCTAA 58.056 33.333 0.00 0.00 0.00 2.10
3302 3345 6.159988 TCCCTGTTTAAACAAACAAGTGTTG 58.840 36.000 20.89 6.26 40.86 3.33
3314 3357 7.328737 TCTAGTAAGCTCATCCCTGTTTAAAC 58.671 38.462 11.54 11.54 0.00 2.01
3315 3358 7.490657 TCTAGTAAGCTCATCCCTGTTTAAA 57.509 36.000 0.00 0.00 0.00 1.52
3363 3406 6.094061 ACAGCGATCTACTTTAAGAACTGTC 58.906 40.000 0.00 0.00 35.22 3.51
3450 3493 9.778993 CAACTTACATATTTTGTGATGGAAGAG 57.221 33.333 12.63 2.88 43.89 2.85
3453 3496 7.039434 TGCCAACTTACATATTTTGTGATGGAA 60.039 33.333 0.00 0.00 39.48 3.53
3457 3500 8.367156 AGTTTGCCAACTTACATATTTTGTGAT 58.633 29.630 0.00 0.00 40.66 3.06
3459 3502 7.945033 AGTTTGCCAACTTACATATTTTGTG 57.055 32.000 0.00 0.00 40.66 3.33
3488 3531 9.853555 CAGCATACCAAAATAACTCAACAATTA 57.146 29.630 0.00 0.00 0.00 1.40
3539 3582 7.923414 GGACAGTTTATGACCTGTAAGAAAT 57.077 36.000 0.00 0.00 40.21 2.17
3615 3658 9.119418 AGACTATCCATCATACTAATCAGATCG 57.881 37.037 0.00 0.00 0.00 3.69
3618 3661 7.617329 CCCAGACTATCCATCATACTAATCAGA 59.383 40.741 0.00 0.00 0.00 3.27
3656 3699 8.533657 AGGATATGTGCAATTTTCTCAAATTCA 58.466 29.630 0.00 0.00 40.09 2.57
3657 3700 8.937634 AGGATATGTGCAATTTTCTCAAATTC 57.062 30.769 0.00 0.00 40.09 2.17
3678 3721 4.768448 TCATTGCACAAGTGAATTGAGGAT 59.232 37.500 0.00 0.00 41.83 3.24
3758 3801 8.325421 TGAAATTTGATCAACAATCCATTTGG 57.675 30.769 7.89 0.00 39.80 3.28
3761 3804 7.909518 TCCTGAAATTTGATCAACAATCCATT 58.090 30.769 7.89 1.19 38.36 3.16
3773 3816 5.246656 TCCAGCACAATTCCTGAAATTTGAT 59.753 36.000 0.00 0.00 35.32 2.57
3785 3828 4.574599 AAAGTTCAGTCCAGCACAATTC 57.425 40.909 0.00 0.00 0.00 2.17
3851 3894 3.966665 AGCCCCTGATGAAACAAGAAAAA 59.033 39.130 0.00 0.00 0.00 1.94
3852 3895 3.575805 AGCCCCTGATGAAACAAGAAAA 58.424 40.909 0.00 0.00 0.00 2.29
3853 3896 3.243359 AGCCCCTGATGAAACAAGAAA 57.757 42.857 0.00 0.00 0.00 2.52
3872 3915 0.388134 GCAAGGACAGCATGCACAAG 60.388 55.000 21.98 9.13 42.53 3.16
3991 4034 2.985896 TCTCCAAACCATTAGGCTTCG 58.014 47.619 0.00 0.00 39.06 3.79
4013 4056 9.624697 TTGCATGACTGTAGAAAACAAAATATC 57.375 29.630 0.00 0.00 37.74 1.63
4014 4057 9.979578 TTTGCATGACTGTAGAAAACAAAATAT 57.020 25.926 0.00 0.00 37.74 1.28
4016 4059 8.715191 TTTTGCATGACTGTAGAAAACAAAAT 57.285 26.923 0.00 0.00 37.74 1.82
4018 4061 9.809096 TTATTTTGCATGACTGTAGAAAACAAA 57.191 25.926 0.00 0.00 37.74 2.83
4021 4064 8.427774 GCTTTATTTTGCATGACTGTAGAAAAC 58.572 33.333 0.00 0.00 0.00 2.43
4022 4065 7.598493 GGCTTTATTTTGCATGACTGTAGAAAA 59.402 33.333 0.00 0.00 0.00 2.29
4023 4066 7.039784 AGGCTTTATTTTGCATGACTGTAGAAA 60.040 33.333 0.00 0.00 0.00 2.52
4024 4067 6.434028 AGGCTTTATTTTGCATGACTGTAGAA 59.566 34.615 0.00 0.00 0.00 2.10
4025 4068 5.945784 AGGCTTTATTTTGCATGACTGTAGA 59.054 36.000 0.00 0.00 0.00 2.59
4026 4069 6.199937 AGGCTTTATTTTGCATGACTGTAG 57.800 37.500 0.00 0.00 0.00 2.74
4027 4070 7.695480 TTAGGCTTTATTTTGCATGACTGTA 57.305 32.000 0.00 0.00 0.00 2.74
4028 4071 6.588719 TTAGGCTTTATTTTGCATGACTGT 57.411 33.333 0.00 0.00 0.00 3.55
4029 4072 6.311200 GGTTTAGGCTTTATTTTGCATGACTG 59.689 38.462 0.00 0.00 0.00 3.51
4030 4073 6.014669 TGGTTTAGGCTTTATTTTGCATGACT 60.015 34.615 0.00 0.00 0.00 3.41
4031 4074 6.162777 TGGTTTAGGCTTTATTTTGCATGAC 58.837 36.000 0.00 0.00 0.00 3.06
4059 4102 9.775854 ACAAGATCTGGAGATTTAAGTATCATG 57.224 33.333 3.42 0.00 34.37 3.07
4065 4108 8.986991 AGTGATACAAGATCTGGAGATTTAAGT 58.013 33.333 3.42 0.00 34.37 2.24
4069 4112 7.429374 TCAGTGATACAAGATCTGGAGATTT 57.571 36.000 3.42 0.00 34.37 2.17
4110 4153 0.627451 TCAGGGAATGCCTTGCTGAT 59.373 50.000 0.00 0.00 40.86 2.90
4182 4225 4.311816 ACAAGCAATGTGAAGGTTCAAG 57.688 40.909 0.00 0.00 41.93 3.02
4205 4248 5.445069 TCTGAAATCACTGGAACAAAGGAA 58.555 37.500 0.00 0.00 38.70 3.36
4216 4259 7.434307 GGCAATGTGATATTTCTGAAATCACTG 59.566 37.037 25.39 20.08 46.22 3.66
4263 4306 6.259550 ACAGATCACATAAACAGGAAAAGC 57.740 37.500 0.00 0.00 0.00 3.51
4264 4307 7.607991 ACCTACAGATCACATAAACAGGAAAAG 59.392 37.037 0.00 0.00 0.00 2.27
4270 4313 5.118990 CCCACCTACAGATCACATAAACAG 58.881 45.833 0.00 0.00 0.00 3.16
4275 4318 3.305720 GACCCCACCTACAGATCACATA 58.694 50.000 0.00 0.00 0.00 2.29
4306 4349 1.008079 GAAGTGGCAACTGCACTGC 60.008 57.895 0.00 7.38 44.36 4.40
4310 4353 1.311859 CTGAAGAAGTGGCAACTGCA 58.688 50.000 0.85 0.00 44.36 4.41
4341 4384 1.939974 TAGCACATAAGCTCTTGCCG 58.060 50.000 5.46 0.00 45.26 5.69
4359 4402 1.002746 TGCTTCGGGCTGCACATTA 60.003 52.632 1.50 0.00 42.39 1.90
4371 4414 0.389391 AGTATGATCGGGGTGCTTCG 59.611 55.000 0.00 0.00 0.00 3.79
4407 4450 4.882842 TTTTGAGCAAAACCTAATCCCC 57.117 40.909 4.39 0.00 35.57 4.81
4425 4468 3.883489 GCTTCCTTGTGACCTGTAGTTTT 59.117 43.478 0.00 0.00 0.00 2.43
4434 4477 0.312102 GTTGCTGCTTCCTTGTGACC 59.688 55.000 0.00 0.00 0.00 4.02
4435 4478 0.312102 GGTTGCTGCTTCCTTGTGAC 59.688 55.000 0.00 0.00 0.00 3.67
4494 4537 4.929146 ACAGCCCCATAGACTAAGTTTT 57.071 40.909 0.00 0.00 0.00 2.43
4500 4543 1.762957 GCAGAACAGCCCCATAGACTA 59.237 52.381 0.00 0.00 0.00 2.59
4506 4549 1.565759 TCTATTGCAGAACAGCCCCAT 59.434 47.619 0.00 0.00 0.00 4.00
4545 4588 9.912634 CCGGAATACAAATAAATTAGCAATCAT 57.087 29.630 0.00 0.00 0.00 2.45
4546 4589 8.908903 ACCGGAATACAAATAAATTAGCAATCA 58.091 29.630 9.46 0.00 0.00 2.57
4547 4590 9.394477 GACCGGAATACAAATAAATTAGCAATC 57.606 33.333 9.46 0.00 0.00 2.67
4548 4591 9.131791 AGACCGGAATACAAATAAATTAGCAAT 57.868 29.630 9.46 0.00 0.00 3.56
4549 4592 8.402472 CAGACCGGAATACAAATAAATTAGCAA 58.598 33.333 9.46 0.00 0.00 3.91
4551 4594 7.855904 CACAGACCGGAATACAAATAAATTAGC 59.144 37.037 9.46 0.00 0.00 3.09
4552 4595 8.889717 ACACAGACCGGAATACAAATAAATTAG 58.110 33.333 9.46 0.00 0.00 1.73
4553 4596 8.795842 ACACAGACCGGAATACAAATAAATTA 57.204 30.769 9.46 0.00 0.00 1.40
4554 4597 7.696992 ACACAGACCGGAATACAAATAAATT 57.303 32.000 9.46 0.00 0.00 1.82
4559 4602 4.933400 GTGTACACAGACCGGAATACAAAT 59.067 41.667 21.14 0.00 0.00 2.32
4582 4626 7.316640 ACAGTAGTAAGAACATAGCTTCACTG 58.683 38.462 0.00 0.00 36.67 3.66
4584 4628 8.030106 AGAACAGTAGTAAGAACATAGCTTCAC 58.970 37.037 0.00 0.00 0.00 3.18
4617 4661 8.103305 ACAATTTACATATAGGGCCTGTCATAG 58.897 37.037 18.53 3.60 0.00 2.23
4618 4662 7.984475 ACAATTTACATATAGGGCCTGTCATA 58.016 34.615 18.53 6.64 0.00 2.15
4633 4677 4.940046 CACTCAGCTCTGGACAATTTACAT 59.060 41.667 0.00 0.00 0.00 2.29
4654 4698 3.434984 GCAAGAGTTGAGGTTCAGATCAC 59.565 47.826 0.00 0.00 0.00 3.06
4673 4717 5.125900 CACACCTGGATTCAGATTTATGCAA 59.874 40.000 1.24 0.00 43.49 4.08
4705 4749 6.980593 TCCAATTCAGTACCAAACAAGAATG 58.019 36.000 0.00 0.00 36.10 2.67
4712 4756 3.763897 AGGCATCCAATTCAGTACCAAAC 59.236 43.478 0.00 0.00 0.00 2.93
4713 4757 4.016444 GAGGCATCCAATTCAGTACCAAA 58.984 43.478 0.00 0.00 0.00 3.28
4717 4761 4.517285 TGAAGAGGCATCCAATTCAGTAC 58.483 43.478 0.00 0.00 30.51 2.73
4719 4763 3.009916 ACTGAAGAGGCATCCAATTCAGT 59.990 43.478 21.72 21.72 46.66 3.41
4720 4764 3.377485 CACTGAAGAGGCATCCAATTCAG 59.623 47.826 20.71 20.71 45.48 3.02
4721 4765 3.245016 ACACTGAAGAGGCATCCAATTCA 60.245 43.478 0.00 0.00 32.23 2.57
4722 4766 3.350833 ACACTGAAGAGGCATCCAATTC 58.649 45.455 0.00 0.00 0.00 2.17
4723 4767 3.350833 GACACTGAAGAGGCATCCAATT 58.649 45.455 0.00 0.00 0.00 2.32
4724 4768 2.356535 GGACACTGAAGAGGCATCCAAT 60.357 50.000 0.00 0.00 0.00 3.16
4725 4769 1.003580 GGACACTGAAGAGGCATCCAA 59.996 52.381 0.00 0.00 0.00 3.53
4727 4771 0.615331 TGGACACTGAAGAGGCATCC 59.385 55.000 0.00 0.00 0.00 3.51
4733 4792 8.454106 CCATTTATAAGTTTGGACACTGAAGAG 58.546 37.037 5.63 0.00 0.00 2.85
4784 4843 3.149196 ACCGTTCTGCAGAATGTTTCAT 58.851 40.909 35.19 18.97 38.93 2.57
4791 4850 1.537202 GAAGCAACCGTTCTGCAGAAT 59.463 47.619 30.65 13.68 42.48 2.40
4858 4917 3.200483 TCTGATTGCTCCGATCAACATG 58.800 45.455 0.00 0.00 34.32 3.21
4864 4923 2.611292 CTGGTTTCTGATTGCTCCGATC 59.389 50.000 0.00 0.00 0.00 3.69
4893 4952 1.678627 CACACGGGTGGTTGAAAATCA 59.321 47.619 10.83 0.00 41.45 2.57
4894 4953 1.950909 TCACACGGGTGGTTGAAAATC 59.049 47.619 19.60 0.00 45.32 2.17
4900 4959 2.465860 TCTTATCACACGGGTGGTTG 57.534 50.000 19.60 7.71 45.32 3.77
4905 4964 4.094830 AGGTTTTTCTTATCACACGGGT 57.905 40.909 0.00 0.00 0.00 5.28
4916 4975 5.109210 GTTGCAACAGCTAAGGTTTTTCTT 58.891 37.500 24.52 0.00 0.00 2.52
4923 4982 5.982890 ATTAATGTTGCAACAGCTAAGGT 57.017 34.783 33.44 15.29 43.04 3.50
4952 5011 2.039405 GCAGGAGCTCAGGCACAAG 61.039 63.158 17.19 0.00 41.70 3.16
4956 5015 4.383861 CGTGCAGGAGCTCAGGCA 62.384 66.667 22.89 22.89 42.74 4.75
4958 5017 1.140589 CTACGTGCAGGAGCTCAGG 59.859 63.158 17.19 7.81 42.74 3.86
4974 5033 3.731728 CAAGGCTGCCCCCTGCTA 61.732 66.667 16.57 0.00 42.00 3.49
4984 5043 5.278660 GGAACATAAGATTATGGCAAGGCTG 60.279 44.000 15.17 0.00 43.69 4.85
4985 5044 4.829492 GGAACATAAGATTATGGCAAGGCT 59.171 41.667 15.17 0.00 43.69 4.58
4986 5045 4.829492 AGGAACATAAGATTATGGCAAGGC 59.171 41.667 15.17 0.00 43.69 4.35
4987 5046 5.829924 ACAGGAACATAAGATTATGGCAAGG 59.170 40.000 15.17 6.10 43.69 3.61
4988 5047 6.949352 ACAGGAACATAAGATTATGGCAAG 57.051 37.500 15.17 5.56 43.69 4.01
5053 5113 0.604780 GCTCTCCTGCTGCAAACTCA 60.605 55.000 3.02 0.00 0.00 3.41
5067 5127 2.178890 CAAGGCATGCGAGGCTCTC 61.179 63.158 12.44 5.04 44.47 3.20
5098 5158 3.390521 ACCCGCTTCGAGCCATCA 61.391 61.111 2.00 0.00 38.18 3.07
5125 5185 1.421268 ACCTGTTCTGGCATGAACTGA 59.579 47.619 24.19 11.12 44.63 3.41
5128 5188 4.009675 TCAATACCTGTTCTGGCATGAAC 58.990 43.478 17.42 17.42 44.60 3.18
5136 5196 3.189287 GGTGCAGTTCAATACCTGTTCTG 59.811 47.826 0.00 0.00 33.40 3.02
5167 5227 1.303236 TGGATTGGGGAGTGTTGCG 60.303 57.895 0.00 0.00 0.00 4.85
5173 5233 1.465188 TGGGTGTGGATTGGGGAGT 60.465 57.895 0.00 0.00 0.00 3.85
5177 5237 1.674322 GACGTGGGTGTGGATTGGG 60.674 63.158 0.00 0.00 0.00 4.12
5193 5253 4.725556 TGAATCAACACTGCGTAAAGAC 57.274 40.909 0.00 0.00 0.00 3.01
5195 5255 4.321745 GCAATGAATCAACACTGCGTAAAG 59.678 41.667 0.00 0.00 33.67 1.85
5198 5258 3.073678 AGCAATGAATCAACACTGCGTA 58.926 40.909 0.00 0.00 45.61 4.42
5199 5259 1.881973 AGCAATGAATCAACACTGCGT 59.118 42.857 0.00 0.00 45.61 5.24
5200 5260 2.161012 AGAGCAATGAATCAACACTGCG 59.839 45.455 0.00 0.00 45.61 5.18
5201 5261 3.439476 AGAGAGCAATGAATCAACACTGC 59.561 43.478 0.00 0.00 42.20 4.40
5204 5264 4.214971 ACACAGAGAGCAATGAATCAACAC 59.785 41.667 0.00 0.00 0.00 3.32
5205 5265 4.392047 ACACAGAGAGCAATGAATCAACA 58.608 39.130 0.00 0.00 0.00 3.33
5207 5267 5.798132 AGTACACAGAGAGCAATGAATCAA 58.202 37.500 0.00 0.00 0.00 2.57
5209 5269 5.519566 CAGAGTACACAGAGAGCAATGAATC 59.480 44.000 0.00 0.00 0.00 2.52
5210 5270 5.186603 TCAGAGTACACAGAGAGCAATGAAT 59.813 40.000 0.00 0.00 0.00 2.57
5211 5271 4.524328 TCAGAGTACACAGAGAGCAATGAA 59.476 41.667 0.00 0.00 0.00 2.57
5212 5272 4.082125 TCAGAGTACACAGAGAGCAATGA 58.918 43.478 0.00 0.00 0.00 2.57
5213 5273 4.446994 TCAGAGTACACAGAGAGCAATG 57.553 45.455 0.00 0.00 0.00 2.82
5214 5274 4.708909 TGATCAGAGTACACAGAGAGCAAT 59.291 41.667 0.00 0.00 0.00 3.56
5215 5275 4.082125 TGATCAGAGTACACAGAGAGCAA 58.918 43.478 0.00 0.00 0.00 3.91
5216 5276 3.441922 GTGATCAGAGTACACAGAGAGCA 59.558 47.826 0.00 0.00 35.06 4.26
5217 5277 3.694072 AGTGATCAGAGTACACAGAGAGC 59.306 47.826 0.00 0.00 37.05 4.09
5218 5278 4.940654 TGAGTGATCAGAGTACACAGAGAG 59.059 45.833 0.00 0.00 37.05 3.20
5226 5286 5.330455 TGGAATGTGAGTGATCAGAGTAC 57.670 43.478 0.00 0.00 0.00 2.73
5227 5287 7.343057 AGTTATGGAATGTGAGTGATCAGAGTA 59.657 37.037 0.00 0.00 0.00 2.59
5230 5290 6.070596 ACAGTTATGGAATGTGAGTGATCAGA 60.071 38.462 0.00 0.00 0.00 3.27
5247 5307 4.278170 TGCTGAAAAGGGTTCACAGTTATG 59.722 41.667 0.00 0.00 0.00 1.90
5248 5308 4.469657 TGCTGAAAAGGGTTCACAGTTAT 58.530 39.130 0.00 0.00 0.00 1.89
5250 5310 2.689983 CTGCTGAAAAGGGTTCACAGTT 59.310 45.455 0.00 0.00 0.00 3.16
5255 5315 3.360867 TCAAACTGCTGAAAAGGGTTCA 58.639 40.909 0.00 0.00 0.00 3.18
5319 5379 0.720027 CTTCAGCTCAGATGTGCACG 59.280 55.000 13.13 0.00 37.04 5.34
5322 5382 1.130749 CTTGCTTCAGCTCAGATGTGC 59.869 52.381 0.00 4.22 42.66 4.57
5395 5457 5.966742 AACTAATCTTCCTTTTCCTGTGC 57.033 39.130 0.00 0.00 0.00 4.57
5396 5458 6.094186 GCCTAACTAATCTTCCTTTTCCTGTG 59.906 42.308 0.00 0.00 0.00 3.66
5397 5459 6.012421 AGCCTAACTAATCTTCCTTTTCCTGT 60.012 38.462 0.00 0.00 0.00 4.00
5398 5460 6.317391 CAGCCTAACTAATCTTCCTTTTCCTG 59.683 42.308 0.00 0.00 0.00 3.86
5399 5461 6.012421 ACAGCCTAACTAATCTTCCTTTTCCT 60.012 38.462 0.00 0.00 0.00 3.36
5401 5463 6.879458 TCACAGCCTAACTAATCTTCCTTTTC 59.121 38.462 0.00 0.00 0.00 2.29
5402 5464 6.779860 TCACAGCCTAACTAATCTTCCTTTT 58.220 36.000 0.00 0.00 0.00 2.27
5477 5539 6.921857 CAGAGAAACAAGAACGGTAGAGTTTA 59.078 38.462 0.00 0.00 34.00 2.01
5479 5541 5.068723 TCAGAGAAACAAGAACGGTAGAGTT 59.931 40.000 0.00 0.00 36.99 3.01
5480 5542 4.583489 TCAGAGAAACAAGAACGGTAGAGT 59.417 41.667 0.00 0.00 0.00 3.24
5485 5547 5.890424 TTTTTCAGAGAAACAAGAACGGT 57.110 34.783 0.00 0.00 0.00 4.83
5569 5631 0.034089 GAACCAAGGGTGCTAGGCAT 60.034 55.000 0.00 0.00 41.91 4.40
5722 5976 5.104941 TGGGAAATCTACACCAGACAGTATG 60.105 44.000 0.00 0.00 46.00 2.39
5724 5978 4.422057 TGGGAAATCTACACCAGACAGTA 58.578 43.478 0.00 0.00 35.62 2.74
5757 6011 0.607620 TGTAAAATTGCCCCAGCTGC 59.392 50.000 8.66 0.00 40.80 5.25
5758 6012 1.895131 ACTGTAAAATTGCCCCAGCTG 59.105 47.619 6.78 6.78 40.80 4.24
5759 6013 2.171003 GACTGTAAAATTGCCCCAGCT 58.829 47.619 0.00 0.00 40.80 4.24
5760 6014 1.135402 CGACTGTAAAATTGCCCCAGC 60.135 52.381 0.00 0.00 40.48 4.85
5761 6015 1.472480 CCGACTGTAAAATTGCCCCAG 59.528 52.381 0.00 0.00 0.00 4.45
5762 6016 1.540267 CCGACTGTAAAATTGCCCCA 58.460 50.000 0.00 0.00 0.00 4.96
5763 6017 0.815095 CCCGACTGTAAAATTGCCCC 59.185 55.000 0.00 0.00 0.00 5.80
5866 6121 9.981114 GGAGTGAATTTCTTTCAGGAAAAATAA 57.019 29.630 0.00 0.00 44.89 1.40
5867 6122 8.585018 GGGAGTGAATTTCTTTCAGGAAAAATA 58.415 33.333 0.00 0.00 44.89 1.40
5868 6123 7.290948 AGGGAGTGAATTTCTTTCAGGAAAAAT 59.709 33.333 0.00 0.00 44.89 1.82
5889 6144 2.633488 GGTTCCGATTCAGAAAGGGAG 58.367 52.381 7.86 0.00 0.00 4.30
5913 6172 5.847304 TCATTCCTATCCGATTCAACTCTG 58.153 41.667 0.00 0.00 0.00 3.35
6044 6303 1.280421 GACAACTCCATGGCTCCTCTT 59.720 52.381 6.96 0.00 0.00 2.85
6172 6438 1.070445 CTGCTAGCCGGGAAGATGG 59.930 63.158 13.29 0.00 0.00 3.51
6190 6456 4.105553 GGGCCGAACCACCCTACC 62.106 72.222 0.00 0.00 43.36 3.18
6285 6580 2.608970 AATCAGCCGCCGCCTACAAT 62.609 55.000 0.00 0.00 34.57 2.71
6333 6628 2.120232 GTCAGTCGTGCAGGATAATCG 58.880 52.381 12.93 0.00 0.00 3.34
6342 6637 2.910479 AGGTCGGTCAGTCGTGCA 60.910 61.111 0.00 0.00 0.00 4.57
6346 6641 2.126307 CTGCAGGTCGGTCAGTCG 60.126 66.667 5.57 0.00 0.00 4.18
6462 6757 7.255486 CCAGTGACAAGTAGTAATATGGATCGA 60.255 40.741 0.00 0.00 0.00 3.59
6476 6771 5.601583 TTGTACTGAACCAGTGACAAGTA 57.398 39.130 9.64 0.00 45.01 2.24
6477 6772 4.481368 TTGTACTGAACCAGTGACAAGT 57.519 40.909 9.64 0.00 45.01 3.16
6478 6773 4.876107 ACTTTGTACTGAACCAGTGACAAG 59.124 41.667 9.64 9.90 45.01 3.16
6519 6814 5.163874 GCTGTTCAGCAAAGACAGATAAGAG 60.164 44.000 18.26 0.00 34.41 2.85
6525 6820 2.158914 TGAGCTGTTCAGCAAAGACAGA 60.159 45.455 23.69 0.00 37.25 3.41
6540 6835 0.455633 GACATTGCGCCTTTGAGCTG 60.456 55.000 4.18 0.00 38.24 4.24
6551 6846 1.372087 GAAGAGGCAGGGACATTGCG 61.372 60.000 0.00 0.00 42.42 4.85
6595 6890 0.179059 TCACTTTGCTTCTCACGGCA 60.179 50.000 0.00 0.00 36.62 5.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.