Multiple sequence alignment - TraesCS5A01G056600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G056600 chr5A 100.000 3617 0 0 1 3617 52710257 52713873 0.000000e+00 6680.0
1 TraesCS5A01G056600 chr5A 90.977 942 65 13 978 1912 52446856 52447784 0.000000e+00 1251.0
2 TraesCS5A01G056600 chr5A 89.329 656 70 0 1973 2628 52448407 52449062 0.000000e+00 824.0
3 TraesCS5A01G056600 chr5A 73.484 841 194 22 4 833 342571932 342571110 1.270000e-74 291.0
4 TraesCS5A01G056600 chr5A 88.372 86 10 0 3286 3371 709488626 709488541 1.780000e-18 104.0
5 TraesCS5A01G056600 chr5B 94.501 1073 41 10 838 1907 67333971 67332914 0.000000e+00 1639.0
6 TraesCS5A01G056600 chr5B 90.190 999 65 21 928 1912 67493288 67492309 0.000000e+00 1271.0
7 TraesCS5A01G056600 chr5B 97.760 625 14 0 1984 2608 67332753 67332129 0.000000e+00 1077.0
8 TraesCS5A01G056600 chr5B 89.596 644 67 0 1985 2628 67491766 67491123 0.000000e+00 819.0
9 TraesCS5A01G056600 chr5B 81.317 653 61 27 2637 3264 67332132 67331516 1.180000e-129 473.0
10 TraesCS5A01G056600 chr5D 94.859 992 49 2 917 1907 63267602 63268592 0.000000e+00 1548.0
11 TraesCS5A01G056600 chr5D 94.271 995 43 5 1972 2955 63268739 63269730 0.000000e+00 1509.0
12 TraesCS5A01G056600 chr5D 89.289 999 73 23 928 1912 63152205 63153183 0.000000e+00 1221.0
13 TraesCS5A01G056600 chr5D 89.193 657 71 0 1972 2628 63153575 63154231 0.000000e+00 821.0
14 TraesCS5A01G056600 chr5D 93.243 74 4 1 3085 3157 63269928 63270001 1.370000e-19 108.0
15 TraesCS5A01G056600 chr5D 91.525 59 5 0 2895 2953 63154500 63154558 8.320000e-12 82.4
16 TraesCS5A01G056600 chr5D 92.593 54 2 1 3049 3100 63269830 63269883 3.870000e-10 76.8
17 TraesCS5A01G056600 chr6B 75.939 1517 294 55 1097 2578 113588243 113589723 0.000000e+00 713.0
18 TraesCS5A01G056600 chr7A 76.971 799 150 19 9 783 134026445 134027233 3.340000e-115 425.0
19 TraesCS5A01G056600 chr7A 76.744 129 26 4 549 675 157203724 157203850 6.480000e-08 69.4
20 TraesCS5A01G056600 chr6A 76.329 828 155 31 1101 1897 59320535 59321352 4.350000e-109 405.0
21 TraesCS5A01G056600 chr6A 79.434 530 81 16 167 690 135566229 135565722 2.070000e-92 350.0
22 TraesCS5A01G056600 chr6A 77.944 467 95 5 370 833 397321144 397320683 5.910000e-73 285.0
23 TraesCS5A01G056600 chr6D 76.029 826 161 26 1101 1897 44496319 44497136 9.410000e-106 394.0
24 TraesCS5A01G056600 chr6D 89.888 89 9 0 3284 3372 44419019 44418931 8.210000e-22 115.0
25 TraesCS5A01G056600 chr7D 77.054 706 147 6 103 804 191843019 191842325 3.390000e-105 392.0
26 TraesCS5A01G056600 chr3A 77.869 610 124 9 1 605 681193274 681192671 5.710000e-98 368.0
27 TraesCS5A01G056600 chr4D 79.216 510 101 4 92 601 310472484 310471980 2.070000e-92 350.0
28 TraesCS5A01G056600 chr2D 80.779 411 77 2 356 765 318593730 318593321 1.620000e-83 320.0
29 TraesCS5A01G056600 chrUn 77.217 575 111 14 176 747 29139817 29139260 5.830000e-83 318.0
30 TraesCS5A01G056600 chr3D 80.319 376 67 7 1137 1509 319866886 319867257 9.890000e-71 278.0
31 TraesCS5A01G056600 chr7B 89.535 86 9 0 3287 3372 578177897 578177812 3.820000e-20 110.0
32 TraesCS5A01G056600 chr7B 89.535 86 9 0 3287 3372 578181171 578181086 3.820000e-20 110.0
33 TraesCS5A01G056600 chr7B 86.667 90 11 1 3287 3375 49905334 49905423 8.270000e-17 99.0
34 TraesCS5A01G056600 chr4A 87.368 95 11 1 3279 3373 734430303 734430210 1.370000e-19 108.0
35 TraesCS5A01G056600 chr4A 92.500 40 3 0 2980 3019 6927499 6927460 1.400000e-04 58.4
36 TraesCS5A01G056600 chr2B 89.412 85 9 0 3287 3371 662885931 662885847 1.370000e-19 108.0
37 TraesCS5A01G056600 chr2B 90.909 44 1 2 2969 3010 82075697 82075739 5.050000e-04 56.5
38 TraesCS5A01G056600 chr3B 90.541 74 7 0 3286 3359 805433581 805433508 8.270000e-17 99.0
39 TraesCS5A01G056600 chr1A 85.882 85 11 1 3287 3371 504719109 504719026 4.970000e-14 89.8
40 TraesCS5A01G056600 chr1A 92.683 41 2 1 2969 3008 16854421 16854461 1.400000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G056600 chr5A 52710257 52713873 3616 False 6680.000000 6680 100.000000 1 3617 1 chr5A.!!$F1 3616
1 TraesCS5A01G056600 chr5A 52446856 52449062 2206 False 1037.500000 1251 90.153000 978 2628 2 chr5A.!!$F2 1650
2 TraesCS5A01G056600 chr5A 342571110 342571932 822 True 291.000000 291 73.484000 4 833 1 chr5A.!!$R1 829
3 TraesCS5A01G056600 chr5B 67331516 67333971 2455 True 1063.000000 1639 91.192667 838 3264 3 chr5B.!!$R1 2426
4 TraesCS5A01G056600 chr5B 67491123 67493288 2165 True 1045.000000 1271 89.893000 928 2628 2 chr5B.!!$R2 1700
5 TraesCS5A01G056600 chr5D 63267602 63270001 2399 False 810.450000 1548 93.741500 917 3157 4 chr5D.!!$F2 2240
6 TraesCS5A01G056600 chr5D 63152205 63154558 2353 False 708.133333 1221 90.002333 928 2953 3 chr5D.!!$F1 2025
7 TraesCS5A01G056600 chr6B 113588243 113589723 1480 False 713.000000 713 75.939000 1097 2578 1 chr6B.!!$F1 1481
8 TraesCS5A01G056600 chr7A 134026445 134027233 788 False 425.000000 425 76.971000 9 783 1 chr7A.!!$F1 774
9 TraesCS5A01G056600 chr6A 59320535 59321352 817 False 405.000000 405 76.329000 1101 1897 1 chr6A.!!$F1 796
10 TraesCS5A01G056600 chr6A 135565722 135566229 507 True 350.000000 350 79.434000 167 690 1 chr6A.!!$R1 523
11 TraesCS5A01G056600 chr6D 44496319 44497136 817 False 394.000000 394 76.029000 1101 1897 1 chr6D.!!$F1 796
12 TraesCS5A01G056600 chr7D 191842325 191843019 694 True 392.000000 392 77.054000 103 804 1 chr7D.!!$R1 701
13 TraesCS5A01G056600 chr3A 681192671 681193274 603 True 368.000000 368 77.869000 1 605 1 chr3A.!!$R1 604
14 TraesCS5A01G056600 chr4D 310471980 310472484 504 True 350.000000 350 79.216000 92 601 1 chr4D.!!$R1 509
15 TraesCS5A01G056600 chrUn 29139260 29139817 557 True 318.000000 318 77.217000 176 747 1 chrUn.!!$R1 571

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
517 564 0.249322 GCGGCTAGGATTTGCTCGTA 60.249 55.0 0.00 0.00 0.00 3.43 F
783 830 0.323629 GTGTCAGAAATGGGACGGGA 59.676 55.0 0.00 0.00 36.83 5.14 F
965 1012 0.899717 CAAGCTGGGGCCTTGCTTTA 60.900 55.0 25.57 0.00 43.47 1.85 F
2109 2981 0.980423 AGGTGAGAGAGGCCTTCAAC 59.020 55.0 12.35 12.35 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1799 1873 0.391927 CAGGTCCTCGTCTCTCTCGT 60.392 60.000 0.00 0.0 0.00 4.18 R
2589 3467 0.596082 CACATGGAACGTGGGGTTTC 59.404 55.000 0.00 0.0 39.50 2.78 R
2636 3514 2.489985 CCTCCGATCTGAGGGAGTACAT 60.490 54.545 22.14 0.0 46.83 2.29 R
3395 4459 0.035820 GGCTTCACGGGGTATCAACA 60.036 55.000 0.00 0.0 0.00 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 0.867753 CTGATGTAGGTCGTGCTCGC 60.868 60.000 2.69 0.00 36.96 5.03
66 67 4.112341 GTAGGTCGTGCTCGCCGT 62.112 66.667 2.69 0.00 37.94 5.68
95 96 1.681486 TATCCCACAGCGGCGAATCA 61.681 55.000 12.98 0.00 0.00 2.57
101 102 3.211963 AGCGGCGAATCAATGGCC 61.212 61.111 12.98 0.00 43.42 5.36
135 136 1.908340 GAGCAGATCAGGTGGCAGGT 61.908 60.000 0.00 0.00 0.00 4.00
210 212 1.529010 GGGATTGGCATGCGATCCA 60.529 57.895 34.19 18.44 40.88 3.41
212 214 1.656441 GATTGGCATGCGATCCACC 59.344 57.895 12.44 0.00 30.97 4.61
215 217 0.897401 TTGGCATGCGATCCACCAAA 60.897 50.000 12.44 0.00 37.45 3.28
222 224 1.098050 GCGATCCACCAAAAGATGCT 58.902 50.000 0.00 0.00 0.00 3.79
240 242 0.328258 CTAGTTGTTGGGGAGGTGGG 59.672 60.000 0.00 0.00 0.00 4.61
274 276 1.076923 AGTGGTATCGCCGTCTCCT 60.077 57.895 0.00 0.00 41.21 3.69
321 323 1.809619 GCACGACCTATTGCGCTGA 60.810 57.895 9.73 0.00 0.00 4.26
322 324 1.756375 GCACGACCTATTGCGCTGAG 61.756 60.000 9.73 2.59 0.00 3.35
451 489 0.396695 CCCCTTGCTGATCCAATGCT 60.397 55.000 0.00 0.00 0.00 3.79
496 535 1.139058 GGATGAGTAGGATGCAACGGT 59.861 52.381 0.00 0.00 0.00 4.83
507 550 4.077184 CAACGGTGGCGGCTAGGA 62.077 66.667 11.43 0.00 0.00 2.94
517 564 0.249322 GCGGCTAGGATTTGCTCGTA 60.249 55.000 0.00 0.00 0.00 3.43
535 582 4.129737 TCGGGGCTCGAGAAAGCG 62.130 66.667 18.75 0.00 43.74 4.68
561 608 2.289694 GGCTAGGAAGTGAAAGCTGTGA 60.290 50.000 0.00 0.00 35.30 3.58
593 640 2.161609 CCACGGCTTCCACATTAAGAAC 59.838 50.000 0.00 0.00 0.00 3.01
597 644 3.335579 GGCTTCCACATTAAGAACGACT 58.664 45.455 0.00 0.00 0.00 4.18
607 654 1.613836 AAGAACGACTACGACCCACT 58.386 50.000 0.00 0.00 42.66 4.00
614 661 2.482664 CGACTACGACCCACTAGCTAGA 60.483 54.545 27.45 0.93 42.66 2.43
620 667 2.814469 CGACCCACTAGCTAGATGGCTA 60.814 54.545 27.45 0.00 42.97 3.93
622 669 3.835395 GACCCACTAGCTAGATGGCTAAT 59.165 47.826 27.45 14.23 43.11 1.73
637 684 1.971357 GCTAATAGCTAGGGCCTGTCA 59.029 52.381 18.53 0.00 38.45 3.58
677 724 2.356780 CGGTGGAGGTAGGTGGACC 61.357 68.421 0.00 0.00 40.08 4.46
679 726 1.608627 GTGGAGGTAGGTGGACCGT 60.609 63.158 0.00 0.00 44.88 4.83
702 749 2.048222 TGCGTCTTCAAGGCGGAG 60.048 61.111 14.40 0.00 44.68 4.63
754 801 3.395639 GTCTGTGTGAACATAAACCGGA 58.604 45.455 9.46 0.00 0.00 5.14
756 803 3.135225 CTGTGTGAACATAAACCGGACA 58.865 45.455 9.46 0.00 0.00 4.02
757 804 3.745799 TGTGTGAACATAAACCGGACAT 58.254 40.909 9.46 0.00 0.00 3.06
769 816 3.973206 ACCGGACATAGATTTGTGTCA 57.027 42.857 9.46 0.00 44.53 3.58
783 830 0.323629 GTGTCAGAAATGGGACGGGA 59.676 55.000 0.00 0.00 36.83 5.14
785 832 2.169769 GTGTCAGAAATGGGACGGGATA 59.830 50.000 0.00 0.00 36.83 2.59
788 835 3.325135 GTCAGAAATGGGACGGGATAGAT 59.675 47.826 0.00 0.00 0.00 1.98
790 837 3.071602 CAGAAATGGGACGGGATAGATGT 59.928 47.826 0.00 0.00 0.00 3.06
799 846 2.698797 ACGGGATAGATGTCAAACGGAT 59.301 45.455 0.00 0.00 0.00 4.18
800 847 3.893200 ACGGGATAGATGTCAAACGGATA 59.107 43.478 0.00 0.00 0.00 2.59
801 848 4.342951 ACGGGATAGATGTCAAACGGATAA 59.657 41.667 0.00 0.00 0.00 1.75
836 883 4.817063 CCGCGCGTTGAGCCAATG 62.817 66.667 29.95 4.86 44.76 2.82
856 903 4.777384 CCGCTATAGGCACATGCA 57.223 55.556 6.15 0.00 44.36 3.96
857 904 3.238232 CCGCTATAGGCACATGCAT 57.762 52.632 6.15 0.39 44.36 3.96
860 907 1.462283 CGCTATAGGCACATGCATGTC 59.538 52.381 29.23 21.63 44.36 3.06
870 917 3.329542 ATGCATGTCTTCGGCGGGT 62.330 57.895 7.21 0.00 0.00 5.28
871 918 3.499737 GCATGTCTTCGGCGGGTG 61.500 66.667 7.21 0.00 0.00 4.61
964 1011 2.202334 AAGCTGGGGCCTTGCTTT 59.798 55.556 23.53 12.59 43.47 3.51
965 1012 0.899717 CAAGCTGGGGCCTTGCTTTA 60.900 55.000 25.57 0.00 43.47 1.85
1161 1211 2.293318 CCTGCACCACCTCCTGCTA 61.293 63.158 0.00 0.00 34.29 3.49
1461 1511 4.116328 CGCGTGCTCTCCTTCCGA 62.116 66.667 0.00 0.00 0.00 4.55
1464 1514 2.182030 GTGCTCTCCTTCCGACCG 59.818 66.667 0.00 0.00 0.00 4.79
1467 1517 3.068691 CTCTCCTTCCGACCGGCA 61.069 66.667 0.00 0.00 34.68 5.69
1789 1863 2.036006 ATAAAAGAACGCGCCGGCA 61.036 52.632 28.98 1.99 39.92 5.69
1790 1864 1.373590 ATAAAAGAACGCGCCGGCAT 61.374 50.000 28.98 8.36 39.92 4.40
1933 2011 3.753797 TCTACGATCATCATTCCTCTCGG 59.246 47.826 0.00 0.00 0.00 4.63
1936 2014 1.345741 GATCATCATTCCTCTCGGCCA 59.654 52.381 2.24 0.00 0.00 5.36
1937 2015 1.427809 TCATCATTCCTCTCGGCCAT 58.572 50.000 2.24 0.00 0.00 4.40
1938 2016 1.345741 TCATCATTCCTCTCGGCCATC 59.654 52.381 2.24 0.00 0.00 3.51
1944 2022 4.103153 TCATTCCTCTCGGCCATCTTATTT 59.897 41.667 2.24 0.00 0.00 1.40
1946 2024 4.503714 TCCTCTCGGCCATCTTATTTTT 57.496 40.909 2.24 0.00 0.00 1.94
1966 2191 5.356882 TTTACACGGCTCTGAAAATTCTG 57.643 39.130 0.00 0.00 0.00 3.02
2052 2924 2.615227 AATGGGCCATGTCGGAGCTC 62.615 60.000 22.01 4.71 36.56 4.09
2085 2957 1.810031 CGAGTTCTCCACAAGGTGCAA 60.810 52.381 0.00 0.00 35.89 4.08
2109 2981 0.980423 AGGTGAGAGAGGCCTTCAAC 59.020 55.000 12.35 12.35 0.00 3.18
2629 3507 8.918658 CATGTGAGAATTGATTTGTTTGTTAGG 58.081 33.333 0.00 0.00 0.00 2.69
2630 3508 8.231692 TGTGAGAATTGATTTGTTTGTTAGGA 57.768 30.769 0.00 0.00 0.00 2.94
2696 3609 2.006888 CGTGGCCAATAGATTCGTGTT 58.993 47.619 7.24 0.00 0.00 3.32
2736 3666 5.657745 TGAATACCCTGTGTAAATCTCGGTA 59.342 40.000 0.00 0.00 31.94 4.02
2764 3708 7.275560 GCTGTTGTACTCATTTGTTTCTTTGTT 59.724 33.333 0.00 0.00 0.00 2.83
2766 3710 8.300286 TGTTGTACTCATTTGTTTCTTTGTTCA 58.700 29.630 0.00 0.00 0.00 3.18
2777 3721 7.650834 TGTTTCTTTGTTCAAAGAGTTTTGG 57.349 32.000 21.64 0.94 43.11 3.28
2888 3856 1.492176 ACTCTATGTCCCATGGGCAAG 59.508 52.381 27.41 20.87 34.68 4.01
2896 3864 1.140852 TCCCATGGGCAAGAGTATTCG 59.859 52.381 27.41 0.00 34.68 3.34
2925 3893 1.484038 AAGCTTCTTGGCCACACAAA 58.516 45.000 3.88 0.00 0.00 2.83
2937 3906 3.065371 GGCCACACAAATTTCTATCTCGG 59.935 47.826 0.00 0.00 0.00 4.63
2982 3983 8.491045 TTTCATCAGGGTTTATTTCTTCCTTT 57.509 30.769 0.00 0.00 0.00 3.11
3166 4230 8.732746 TCCTAGTTAAATTTAAGGTCTGATGC 57.267 34.615 10.92 0.00 0.00 3.91
3167 4231 8.548877 TCCTAGTTAAATTTAAGGTCTGATGCT 58.451 33.333 10.92 4.44 0.00 3.79
3168 4232 8.831550 CCTAGTTAAATTTAAGGTCTGATGCTC 58.168 37.037 10.92 0.00 0.00 4.26
3169 4233 9.383519 CTAGTTAAATTTAAGGTCTGATGCTCA 57.616 33.333 10.92 0.00 0.00 4.26
3170 4234 8.635765 AGTTAAATTTAAGGTCTGATGCTCAA 57.364 30.769 10.92 0.00 0.00 3.02
3171 4235 9.077885 AGTTAAATTTAAGGTCTGATGCTCAAA 57.922 29.630 10.92 0.00 0.00 2.69
3172 4236 9.691362 GTTAAATTTAAGGTCTGATGCTCAAAA 57.309 29.630 10.92 0.00 0.00 2.44
3225 4289 8.994500 TGACCCAAAATACATGGTAGACTAATA 58.006 33.333 0.00 0.00 36.14 0.98
3236 4300 6.839124 TGGTAGACTAATAAAACCAGACGA 57.161 37.500 0.00 0.00 35.34 4.20
3245 4309 8.033626 ACTAATAAAACCAGACGAAGGAAGTAG 58.966 37.037 0.00 0.00 0.00 2.57
3247 4311 0.526662 ACCAGACGAAGGAAGTAGCG 59.473 55.000 0.00 0.00 0.00 4.26
3248 4312 0.526662 CCAGACGAAGGAAGTAGCGT 59.473 55.000 0.00 0.00 39.99 5.07
3250 4314 2.223294 CCAGACGAAGGAAGTAGCGTAG 60.223 54.545 0.00 0.00 37.07 3.51
3257 4321 3.833545 AGGAAGTAGCGTAGATATGCG 57.166 47.619 0.00 0.00 42.84 4.73
3258 4322 3.147629 AGGAAGTAGCGTAGATATGCGT 58.852 45.455 0.00 0.00 42.84 5.24
3264 4328 6.791887 AGTAGCGTAGATATGCGTTAACTA 57.208 37.500 3.71 0.00 42.84 2.24
3265 4329 6.597614 AGTAGCGTAGATATGCGTTAACTAC 58.402 40.000 3.71 2.95 42.84 2.73
3266 4330 5.686159 AGCGTAGATATGCGTTAACTACT 57.314 39.130 3.71 0.00 42.84 2.57
3267 4331 6.069684 AGCGTAGATATGCGTTAACTACTT 57.930 37.500 3.71 0.00 42.84 2.24
3268 4332 7.194607 AGCGTAGATATGCGTTAACTACTTA 57.805 36.000 3.71 0.00 42.84 2.24
3269 4333 7.074502 AGCGTAGATATGCGTTAACTACTTAC 58.925 38.462 3.71 0.00 42.84 2.34
3270 4334 6.304208 GCGTAGATATGCGTTAACTACTTACC 59.696 42.308 3.71 0.00 35.23 2.85
3271 4335 7.355017 CGTAGATATGCGTTAACTACTTACCA 58.645 38.462 3.71 0.00 35.23 3.25
3272 4336 8.019669 CGTAGATATGCGTTAACTACTTACCAT 58.980 37.037 3.71 0.00 35.23 3.55
3273 4337 9.688592 GTAGATATGCGTTAACTACTTACCATT 57.311 33.333 3.71 0.00 34.80 3.16
3308 4372 9.447157 AGGAATCTATCATTATTAAGAAGCTGC 57.553 33.333 0.00 0.00 0.00 5.25
3309 4373 9.447157 GGAATCTATCATTATTAAGAAGCTGCT 57.553 33.333 0.00 0.00 0.00 4.24
3311 4375 9.447157 AATCTATCATTATTAAGAAGCTGCTCC 57.553 33.333 1.00 0.00 0.00 4.70
3312 4376 7.390027 TCTATCATTATTAAGAAGCTGCTCCC 58.610 38.462 1.00 0.00 0.00 4.30
3313 4377 4.718961 TCATTATTAAGAAGCTGCTCCCC 58.281 43.478 1.00 0.00 0.00 4.81
3314 4378 4.165950 TCATTATTAAGAAGCTGCTCCCCA 59.834 41.667 1.00 0.00 0.00 4.96
3315 4379 2.426842 ATTAAGAAGCTGCTCCCCAC 57.573 50.000 1.00 0.00 0.00 4.61
3316 4380 1.362224 TTAAGAAGCTGCTCCCCACT 58.638 50.000 1.00 0.00 0.00 4.00
3317 4381 2.247699 TAAGAAGCTGCTCCCCACTA 57.752 50.000 1.00 0.00 0.00 2.74
3318 4382 0.615850 AAGAAGCTGCTCCCCACTAC 59.384 55.000 1.00 0.00 0.00 2.73
3319 4383 0.545309 AGAAGCTGCTCCCCACTACA 60.545 55.000 1.00 0.00 0.00 2.74
3320 4384 0.543749 GAAGCTGCTCCCCACTACAT 59.456 55.000 1.00 0.00 0.00 2.29
3321 4385 0.543749 AAGCTGCTCCCCACTACATC 59.456 55.000 1.00 0.00 0.00 3.06
3322 4386 1.147153 GCTGCTCCCCACTACATCC 59.853 63.158 0.00 0.00 0.00 3.51
3323 4387 1.341156 GCTGCTCCCCACTACATCCT 61.341 60.000 0.00 0.00 0.00 3.24
3324 4388 2.034799 GCTGCTCCCCACTACATCCTA 61.035 57.143 0.00 0.00 0.00 2.94
3325 4389 2.614259 CTGCTCCCCACTACATCCTAT 58.386 52.381 0.00 0.00 0.00 2.57
3326 4390 2.975489 CTGCTCCCCACTACATCCTATT 59.025 50.000 0.00 0.00 0.00 1.73
3327 4391 3.392616 CTGCTCCCCACTACATCCTATTT 59.607 47.826 0.00 0.00 0.00 1.40
3328 4392 3.785887 TGCTCCCCACTACATCCTATTTT 59.214 43.478 0.00 0.00 0.00 1.82
3329 4393 4.141482 TGCTCCCCACTACATCCTATTTTC 60.141 45.833 0.00 0.00 0.00 2.29
3330 4394 4.103311 GCTCCCCACTACATCCTATTTTCT 59.897 45.833 0.00 0.00 0.00 2.52
3331 4395 5.743422 GCTCCCCACTACATCCTATTTTCTC 60.743 48.000 0.00 0.00 0.00 2.87
3332 4396 5.285401 TCCCCACTACATCCTATTTTCTCA 58.715 41.667 0.00 0.00 0.00 3.27
3333 4397 5.911178 TCCCCACTACATCCTATTTTCTCAT 59.089 40.000 0.00 0.00 0.00 2.90
3334 4398 6.043243 TCCCCACTACATCCTATTTTCTCATC 59.957 42.308 0.00 0.00 0.00 2.92
3335 4399 6.183361 CCCCACTACATCCTATTTTCTCATCA 60.183 42.308 0.00 0.00 0.00 3.07
3336 4400 7.456725 CCCACTACATCCTATTTTCTCATCAT 58.543 38.462 0.00 0.00 0.00 2.45
3337 4401 7.389884 CCCACTACATCCTATTTTCTCATCATG 59.610 40.741 0.00 0.00 0.00 3.07
3338 4402 7.094890 CCACTACATCCTATTTTCTCATCATGC 60.095 40.741 0.00 0.00 0.00 4.06
3339 4403 7.443272 CACTACATCCTATTTTCTCATCATGCA 59.557 37.037 0.00 0.00 0.00 3.96
3340 4404 6.630444 ACATCCTATTTTCTCATCATGCAC 57.370 37.500 0.00 0.00 0.00 4.57
3341 4405 6.124340 ACATCCTATTTTCTCATCATGCACA 58.876 36.000 0.00 0.00 0.00 4.57
3342 4406 6.039047 ACATCCTATTTTCTCATCATGCACAC 59.961 38.462 0.00 0.00 0.00 3.82
3343 4407 5.748402 TCCTATTTTCTCATCATGCACACT 58.252 37.500 0.00 0.00 0.00 3.55
3344 4408 5.587443 TCCTATTTTCTCATCATGCACACTG 59.413 40.000 0.00 0.00 0.00 3.66
3345 4409 5.356190 CCTATTTTCTCATCATGCACACTGT 59.644 40.000 0.00 0.00 0.00 3.55
3346 4410 4.754372 TTTTCTCATCATGCACACTGTC 57.246 40.909 0.00 0.00 0.00 3.51
3347 4411 2.391616 TCTCATCATGCACACTGTCC 57.608 50.000 0.00 0.00 0.00 4.02
3348 4412 1.624813 TCTCATCATGCACACTGTCCA 59.375 47.619 0.00 0.00 0.00 4.02
3349 4413 1.736126 CTCATCATGCACACTGTCCAC 59.264 52.381 0.00 0.00 0.00 4.02
3350 4414 1.072015 TCATCATGCACACTGTCCACA 59.928 47.619 0.00 0.00 0.00 4.17
3351 4415 2.089201 CATCATGCACACTGTCCACAT 58.911 47.619 0.00 0.00 0.00 3.21
3352 4416 1.812235 TCATGCACACTGTCCACATC 58.188 50.000 0.00 0.00 0.00 3.06
3353 4417 1.072015 TCATGCACACTGTCCACATCA 59.928 47.619 0.00 0.00 0.00 3.07
3354 4418 1.467342 CATGCACACTGTCCACATCAG 59.533 52.381 0.00 0.00 38.68 2.90
3355 4419 0.886043 TGCACACTGTCCACATCAGC 60.886 55.000 0.00 0.00 36.50 4.26
3356 4420 0.886043 GCACACTGTCCACATCAGCA 60.886 55.000 0.00 0.00 36.50 4.41
3357 4421 1.596603 CACACTGTCCACATCAGCAA 58.403 50.000 0.00 0.00 36.50 3.91
3358 4422 2.156917 CACACTGTCCACATCAGCAAT 58.843 47.619 0.00 0.00 36.50 3.56
3359 4423 3.337358 CACACTGTCCACATCAGCAATA 58.663 45.455 0.00 0.00 36.50 1.90
3360 4424 3.943381 CACACTGTCCACATCAGCAATAT 59.057 43.478 0.00 0.00 36.50 1.28
3361 4425 3.943381 ACACTGTCCACATCAGCAATATG 59.057 43.478 0.00 0.00 36.50 1.78
3362 4426 2.947652 ACTGTCCACATCAGCAATATGC 59.052 45.455 0.00 0.00 45.46 3.14
3363 4427 2.292569 CTGTCCACATCAGCAATATGCC 59.707 50.000 0.00 0.00 46.52 4.40
3364 4428 2.300433 GTCCACATCAGCAATATGCCA 58.700 47.619 0.00 0.00 46.52 4.92
3365 4429 2.033801 GTCCACATCAGCAATATGCCAC 59.966 50.000 0.00 0.00 46.52 5.01
3366 4430 2.025898 CCACATCAGCAATATGCCACA 58.974 47.619 0.00 0.00 46.52 4.17
3367 4431 2.626266 CCACATCAGCAATATGCCACAT 59.374 45.455 0.00 0.00 46.52 3.21
3368 4432 3.305131 CCACATCAGCAATATGCCACATC 60.305 47.826 0.00 0.00 46.52 3.06
3369 4433 3.316868 CACATCAGCAATATGCCACATCA 59.683 43.478 0.00 0.00 46.52 3.07
3370 4434 4.022329 CACATCAGCAATATGCCACATCAT 60.022 41.667 0.00 0.00 46.52 2.45
3371 4435 4.217767 ACATCAGCAATATGCCACATCATC 59.782 41.667 0.00 0.00 46.52 2.92
3372 4436 4.094830 TCAGCAATATGCCACATCATCT 57.905 40.909 0.00 0.00 46.52 2.90
3373 4437 4.466827 TCAGCAATATGCCACATCATCTT 58.533 39.130 0.00 0.00 46.52 2.40
3374 4438 4.517832 TCAGCAATATGCCACATCATCTTC 59.482 41.667 0.00 0.00 46.52 2.87
3375 4439 4.519350 CAGCAATATGCCACATCATCTTCT 59.481 41.667 0.00 0.00 46.52 2.85
3376 4440 4.519350 AGCAATATGCCACATCATCTTCTG 59.481 41.667 0.00 0.00 46.52 3.02
3377 4441 4.795268 CAATATGCCACATCATCTTCTGC 58.205 43.478 0.00 0.00 0.00 4.26
3378 4442 2.430248 ATGCCACATCATCTTCTGCA 57.570 45.000 0.00 0.00 0.00 4.41
3379 4443 2.430248 TGCCACATCATCTTCTGCAT 57.570 45.000 0.00 0.00 0.00 3.96
3380 4444 3.564053 TGCCACATCATCTTCTGCATA 57.436 42.857 0.00 0.00 0.00 3.14
3381 4445 4.094830 TGCCACATCATCTTCTGCATAT 57.905 40.909 0.00 0.00 0.00 1.78
3382 4446 5.231702 TGCCACATCATCTTCTGCATATA 57.768 39.130 0.00 0.00 0.00 0.86
3383 4447 5.623169 TGCCACATCATCTTCTGCATATAA 58.377 37.500 0.00 0.00 0.00 0.98
3384 4448 6.063404 TGCCACATCATCTTCTGCATATAAA 58.937 36.000 0.00 0.00 0.00 1.40
3385 4449 6.717997 TGCCACATCATCTTCTGCATATAAAT 59.282 34.615 0.00 0.00 0.00 1.40
3386 4450 7.884354 TGCCACATCATCTTCTGCATATAAATA 59.116 33.333 0.00 0.00 0.00 1.40
3387 4451 8.180267 GCCACATCATCTTCTGCATATAAATAC 58.820 37.037 0.00 0.00 0.00 1.89
3388 4452 9.445878 CCACATCATCTTCTGCATATAAATACT 57.554 33.333 0.00 0.00 0.00 2.12
3391 4455 9.770503 CATCATCTTCTGCATATAAATACTTGC 57.229 33.333 0.00 0.00 35.67 4.01
3392 4456 8.327941 TCATCTTCTGCATATAAATACTTGCC 57.672 34.615 0.00 0.00 34.20 4.52
3393 4457 7.391554 TCATCTTCTGCATATAAATACTTGCCC 59.608 37.037 0.00 0.00 34.20 5.36
3394 4458 6.003950 TCTTCTGCATATAAATACTTGCCCC 58.996 40.000 0.00 0.00 34.20 5.80
3395 4459 5.582950 TCTGCATATAAATACTTGCCCCT 57.417 39.130 0.00 0.00 34.20 4.79
3396 4460 5.316167 TCTGCATATAAATACTTGCCCCTG 58.684 41.667 0.00 0.00 34.20 4.45
3397 4461 5.060427 TGCATATAAATACTTGCCCCTGT 57.940 39.130 0.00 0.00 34.20 4.00
3398 4462 5.454062 TGCATATAAATACTTGCCCCTGTT 58.546 37.500 0.00 0.00 34.20 3.16
3399 4463 5.301551 TGCATATAAATACTTGCCCCTGTTG 59.698 40.000 0.00 0.00 34.20 3.33
3400 4464 5.534654 GCATATAAATACTTGCCCCTGTTGA 59.465 40.000 0.00 0.00 0.00 3.18
3401 4465 6.209391 GCATATAAATACTTGCCCCTGTTGAT 59.791 38.462 0.00 0.00 0.00 2.57
3402 4466 7.393234 GCATATAAATACTTGCCCCTGTTGATA 59.607 37.037 0.00 0.00 0.00 2.15
3403 4467 8.730680 CATATAAATACTTGCCCCTGTTGATAC 58.269 37.037 0.00 0.00 0.00 2.24
3404 4468 3.577805 ATACTTGCCCCTGTTGATACC 57.422 47.619 0.00 0.00 0.00 2.73
3405 4469 0.331616 ACTTGCCCCTGTTGATACCC 59.668 55.000 0.00 0.00 0.00 3.69
3406 4470 0.395724 CTTGCCCCTGTTGATACCCC 60.396 60.000 0.00 0.00 0.00 4.95
3407 4471 2.192175 GCCCCTGTTGATACCCCG 59.808 66.667 0.00 0.00 0.00 5.73
3408 4472 2.676265 GCCCCTGTTGATACCCCGT 61.676 63.158 0.00 0.00 0.00 5.28
3409 4473 1.223487 CCCCTGTTGATACCCCGTG 59.777 63.158 0.00 0.00 0.00 4.94
3410 4474 1.268992 CCCCTGTTGATACCCCGTGA 61.269 60.000 0.00 0.00 0.00 4.35
3411 4475 0.616371 CCCTGTTGATACCCCGTGAA 59.384 55.000 0.00 0.00 0.00 3.18
3412 4476 1.406887 CCCTGTTGATACCCCGTGAAG 60.407 57.143 0.00 0.00 0.00 3.02
3413 4477 1.369625 CTGTTGATACCCCGTGAAGC 58.630 55.000 0.00 0.00 0.00 3.86
3414 4478 0.035820 TGTTGATACCCCGTGAAGCC 60.036 55.000 0.00 0.00 0.00 4.35
3415 4479 0.252197 GTTGATACCCCGTGAAGCCT 59.748 55.000 0.00 0.00 0.00 4.58
3416 4480 0.539986 TTGATACCCCGTGAAGCCTC 59.460 55.000 0.00 0.00 0.00 4.70
3417 4481 1.335132 TGATACCCCGTGAAGCCTCC 61.335 60.000 0.00 0.00 0.00 4.30
3418 4482 1.003051 ATACCCCGTGAAGCCTCCT 59.997 57.895 0.00 0.00 0.00 3.69
3419 4483 1.049289 ATACCCCGTGAAGCCTCCTC 61.049 60.000 0.00 0.00 0.00 3.71
3420 4484 2.449967 TACCCCGTGAAGCCTCCTCA 62.450 60.000 0.00 0.00 0.00 3.86
3421 4485 2.592993 CCCCGTGAAGCCTCCTCAA 61.593 63.158 0.00 0.00 0.00 3.02
3422 4486 1.376037 CCCGTGAAGCCTCCTCAAC 60.376 63.158 0.00 0.00 0.00 3.18
3423 4487 1.738099 CCGTGAAGCCTCCTCAACG 60.738 63.158 0.00 0.00 32.61 4.10
3424 4488 1.289066 CGTGAAGCCTCCTCAACGA 59.711 57.895 0.00 0.00 33.88 3.85
3425 4489 0.108615 CGTGAAGCCTCCTCAACGAT 60.109 55.000 0.00 0.00 33.88 3.73
3426 4490 1.646189 GTGAAGCCTCCTCAACGATC 58.354 55.000 0.00 0.00 0.00 3.69
3427 4491 0.173481 TGAAGCCTCCTCAACGATCG 59.827 55.000 14.88 14.88 0.00 3.69
3428 4492 1.148759 GAAGCCTCCTCAACGATCGC 61.149 60.000 16.60 0.00 0.00 4.58
3429 4493 1.608717 AAGCCTCCTCAACGATCGCT 61.609 55.000 16.60 0.00 0.00 4.93
3430 4494 0.752009 AGCCTCCTCAACGATCGCTA 60.752 55.000 16.60 0.00 0.00 4.26
3431 4495 0.315568 GCCTCCTCAACGATCGCTAT 59.684 55.000 16.60 0.00 0.00 2.97
3432 4496 1.269831 GCCTCCTCAACGATCGCTATT 60.270 52.381 16.60 0.00 0.00 1.73
3433 4497 2.667137 CCTCCTCAACGATCGCTATTC 58.333 52.381 16.60 0.00 0.00 1.75
3434 4498 2.608261 CCTCCTCAACGATCGCTATTCC 60.608 54.545 16.60 0.00 0.00 3.01
3435 4499 2.294791 CTCCTCAACGATCGCTATTCCT 59.705 50.000 16.60 0.00 0.00 3.36
3436 4500 2.034685 TCCTCAACGATCGCTATTCCTG 59.965 50.000 16.60 1.66 0.00 3.86
3437 4501 2.398498 CTCAACGATCGCTATTCCTGG 58.602 52.381 16.60 0.00 0.00 4.45
3438 4502 0.861837 CAACGATCGCTATTCCTGGC 59.138 55.000 16.60 0.00 0.00 4.85
3443 4507 3.643978 CGCTATTCCTGGCGCTGC 61.644 66.667 7.64 0.00 45.46 5.25
3459 4523 4.700365 GCCGCCCGCACAGTTTTC 62.700 66.667 0.00 0.00 37.47 2.29
3460 4524 2.978010 CCGCCCGCACAGTTTTCT 60.978 61.111 0.00 0.00 0.00 2.52
3461 4525 2.556287 CGCCCGCACAGTTTTCTC 59.444 61.111 0.00 0.00 0.00 2.87
3462 4526 2.556287 GCCCGCACAGTTTTCTCG 59.444 61.111 0.00 0.00 0.00 4.04
3463 4527 2.556287 CCCGCACAGTTTTCTCGC 59.444 61.111 0.00 0.00 0.00 5.03
3464 4528 1.961277 CCCGCACAGTTTTCTCGCT 60.961 57.895 0.00 0.00 0.00 4.93
3465 4529 1.205064 CCGCACAGTTTTCTCGCTG 59.795 57.895 0.00 0.00 38.58 5.18
3466 4530 1.439365 CGCACAGTTTTCTCGCTGC 60.439 57.895 0.00 0.00 36.26 5.25
3467 4531 1.648720 GCACAGTTTTCTCGCTGCA 59.351 52.632 0.00 0.00 36.26 4.41
3468 4532 0.239347 GCACAGTTTTCTCGCTGCAT 59.761 50.000 0.00 0.00 36.26 3.96
3469 4533 1.959747 CACAGTTTTCTCGCTGCATG 58.040 50.000 0.00 0.00 36.26 4.06
3470 4534 0.877071 ACAGTTTTCTCGCTGCATGG 59.123 50.000 0.00 0.00 36.26 3.66
3471 4535 0.169672 CAGTTTTCTCGCTGCATGGG 59.830 55.000 0.00 0.00 0.00 4.00
3472 4536 0.250901 AGTTTTCTCGCTGCATGGGT 60.251 50.000 0.00 0.00 0.00 4.51
3473 4537 0.598065 GTTTTCTCGCTGCATGGGTT 59.402 50.000 0.00 0.00 0.00 4.11
3474 4538 0.881118 TTTTCTCGCTGCATGGGTTC 59.119 50.000 0.00 0.00 0.00 3.62
3475 4539 0.960364 TTTCTCGCTGCATGGGTTCC 60.960 55.000 0.00 0.00 0.00 3.62
3476 4540 2.819984 TTCTCGCTGCATGGGTTCCC 62.820 60.000 0.00 0.12 0.00 3.97
3477 4541 4.776322 TCGCTGCATGGGTTCCCG 62.776 66.667 0.00 0.00 0.00 5.14
3481 4545 4.652131 TGCATGGGTTCCCGCGTT 62.652 61.111 4.92 0.00 0.00 4.84
3482 4546 3.370231 GCATGGGTTCCCGCGTTT 61.370 61.111 4.92 0.00 0.00 3.60
3483 4547 2.041686 GCATGGGTTCCCGCGTTTA 61.042 57.895 4.92 0.00 0.00 2.01
3484 4548 1.587933 GCATGGGTTCCCGCGTTTAA 61.588 55.000 4.92 0.00 0.00 1.52
3485 4549 0.450184 CATGGGTTCCCGCGTTTAAG 59.550 55.000 4.92 0.00 0.00 1.85
3486 4550 1.310216 ATGGGTTCCCGCGTTTAAGC 61.310 55.000 4.92 5.67 0.00 3.09
3487 4551 2.693762 GGGTTCCCGCGTTTAAGCC 61.694 63.158 14.90 14.90 34.01 4.35
3488 4552 1.967494 GGTTCCCGCGTTTAAGCCA 60.967 57.895 4.92 0.00 0.00 4.75
3489 4553 1.517210 GGTTCCCGCGTTTAAGCCAA 61.517 55.000 4.92 0.00 0.00 4.52
3490 4554 0.386352 GTTCCCGCGTTTAAGCCAAC 60.386 55.000 4.92 0.00 0.00 3.77
3491 4555 0.818445 TTCCCGCGTTTAAGCCAACA 60.818 50.000 4.92 0.00 0.00 3.33
3492 4556 0.818445 TCCCGCGTTTAAGCCAACAA 60.818 50.000 4.92 0.00 0.00 2.83
3493 4557 0.662077 CCCGCGTTTAAGCCAACAAC 60.662 55.000 4.92 0.00 0.00 3.32
3494 4558 0.309612 CCGCGTTTAAGCCAACAACT 59.690 50.000 4.92 0.00 0.00 3.16
3495 4559 1.394697 CGCGTTTAAGCCAACAACTG 58.605 50.000 0.00 0.00 0.00 3.16
3497 4561 1.601914 GCGTTTAAGCCAACAACTGGG 60.602 52.381 0.00 0.00 46.54 4.45
3506 4570 3.191078 CCAACAACTGGGCAATTTTCA 57.809 42.857 0.00 0.00 42.17 2.69
3507 4571 2.871633 CCAACAACTGGGCAATTTTCAC 59.128 45.455 0.00 0.00 42.17 3.18
3508 4572 3.529533 CAACAACTGGGCAATTTTCACA 58.470 40.909 0.00 0.00 0.00 3.58
3509 4573 3.902881 ACAACTGGGCAATTTTCACAA 57.097 38.095 0.00 0.00 0.00 3.33
3510 4574 4.213564 ACAACTGGGCAATTTTCACAAA 57.786 36.364 0.00 0.00 0.00 2.83
3511 4575 4.779696 ACAACTGGGCAATTTTCACAAAT 58.220 34.783 0.00 0.00 33.72 2.32
3512 4576 4.575645 ACAACTGGGCAATTTTCACAAATG 59.424 37.500 0.00 0.00 32.57 2.32
3513 4577 3.742385 ACTGGGCAATTTTCACAAATGG 58.258 40.909 0.00 0.00 32.57 3.16
3514 4578 3.075884 CTGGGCAATTTTCACAAATGGG 58.924 45.455 0.00 0.00 32.57 4.00
3515 4579 1.811965 GGGCAATTTTCACAAATGGGC 59.188 47.619 0.93 0.93 44.72 5.36
3516 4580 2.552809 GGGCAATTTTCACAAATGGGCT 60.553 45.455 8.15 0.00 44.79 5.19
3517 4581 2.485038 GGCAATTTTCACAAATGGGCTG 59.515 45.455 2.19 0.00 42.96 4.85
3518 4582 2.095617 GCAATTTTCACAAATGGGCTGC 60.096 45.455 0.00 0.00 33.63 5.25
3519 4583 2.477845 ATTTTCACAAATGGGCTGCC 57.522 45.000 11.05 11.05 30.89 4.85
3520 4584 1.422531 TTTTCACAAATGGGCTGCCT 58.577 45.000 19.68 0.00 0.00 4.75
3521 4585 0.680618 TTTCACAAATGGGCTGCCTG 59.319 50.000 19.68 11.37 0.00 4.85
3522 4586 0.178967 TTCACAAATGGGCTGCCTGA 60.179 50.000 19.68 10.30 0.00 3.86
3523 4587 0.040058 TCACAAATGGGCTGCCTGAT 59.960 50.000 19.68 8.26 0.00 2.90
3524 4588 0.458669 CACAAATGGGCTGCCTGATC 59.541 55.000 19.68 1.77 0.00 2.92
3525 4589 0.685458 ACAAATGGGCTGCCTGATCC 60.685 55.000 19.68 1.35 0.00 3.36
3526 4590 0.685131 CAAATGGGCTGCCTGATCCA 60.685 55.000 19.68 7.89 0.00 3.41
3527 4591 0.041535 AAATGGGCTGCCTGATCCAA 59.958 50.000 19.68 0.00 32.56 3.53
3528 4592 0.396695 AATGGGCTGCCTGATCCAAG 60.397 55.000 19.68 0.00 32.56 3.61
3529 4593 1.578215 ATGGGCTGCCTGATCCAAGT 61.578 55.000 19.68 0.00 32.56 3.16
3530 4594 1.000396 GGGCTGCCTGATCCAAGTT 60.000 57.895 19.68 0.00 0.00 2.66
3531 4595 0.255890 GGGCTGCCTGATCCAAGTTA 59.744 55.000 19.68 0.00 0.00 2.24
3532 4596 1.673168 GGCTGCCTGATCCAAGTTAG 58.327 55.000 12.43 0.00 0.00 2.34
3533 4597 1.065126 GGCTGCCTGATCCAAGTTAGT 60.065 52.381 12.43 0.00 0.00 2.24
3534 4598 2.170607 GGCTGCCTGATCCAAGTTAGTA 59.829 50.000 12.43 0.00 0.00 1.82
3535 4599 3.462021 GCTGCCTGATCCAAGTTAGTAG 58.538 50.000 0.00 0.00 0.00 2.57
3536 4600 3.462021 CTGCCTGATCCAAGTTAGTAGC 58.538 50.000 0.00 0.00 0.00 3.58
3537 4601 3.107601 TGCCTGATCCAAGTTAGTAGCT 58.892 45.455 0.00 0.00 0.00 3.32
3538 4602 3.519510 TGCCTGATCCAAGTTAGTAGCTT 59.480 43.478 0.00 0.00 0.00 3.74
3539 4603 3.873952 GCCTGATCCAAGTTAGTAGCTTG 59.126 47.826 17.30 17.30 42.00 4.01
3540 4604 3.873952 CCTGATCCAAGTTAGTAGCTTGC 59.126 47.826 18.48 8.14 41.27 4.01
3541 4605 4.383552 CCTGATCCAAGTTAGTAGCTTGCT 60.384 45.833 18.48 9.65 41.27 3.91
3542 4606 5.165961 TGATCCAAGTTAGTAGCTTGCTT 57.834 39.130 18.48 9.49 41.27 3.91
3543 4607 5.560724 TGATCCAAGTTAGTAGCTTGCTTT 58.439 37.500 18.48 7.40 41.27 3.51
3544 4608 5.412594 TGATCCAAGTTAGTAGCTTGCTTTG 59.587 40.000 18.48 7.55 41.27 2.77
3545 4609 4.714632 TCCAAGTTAGTAGCTTGCTTTGT 58.285 39.130 18.48 0.00 41.27 2.83
3546 4610 4.755123 TCCAAGTTAGTAGCTTGCTTTGTC 59.245 41.667 18.48 0.00 41.27 3.18
3547 4611 4.377431 CCAAGTTAGTAGCTTGCTTTGTCG 60.377 45.833 18.48 2.76 41.27 4.35
3548 4612 3.991367 AGTTAGTAGCTTGCTTTGTCGT 58.009 40.909 0.00 0.00 0.00 4.34
3549 4613 4.377897 AGTTAGTAGCTTGCTTTGTCGTT 58.622 39.130 0.00 0.00 0.00 3.85
3550 4614 5.535333 AGTTAGTAGCTTGCTTTGTCGTTA 58.465 37.500 0.00 0.00 0.00 3.18
3551 4615 5.634020 AGTTAGTAGCTTGCTTTGTCGTTAG 59.366 40.000 0.00 0.00 0.00 2.34
3552 4616 3.991367 AGTAGCTTGCTTTGTCGTTAGT 58.009 40.909 0.00 0.00 0.00 2.24
3553 4617 3.741344 AGTAGCTTGCTTTGTCGTTAGTG 59.259 43.478 0.00 0.00 0.00 2.74
3554 4618 1.264288 AGCTTGCTTTGTCGTTAGTGC 59.736 47.619 0.00 0.00 0.00 4.40
3555 4619 1.663161 GCTTGCTTTGTCGTTAGTGCC 60.663 52.381 0.00 0.00 0.00 5.01
3556 4620 1.601903 CTTGCTTTGTCGTTAGTGCCA 59.398 47.619 0.00 0.00 0.00 4.92
3557 4621 1.225855 TGCTTTGTCGTTAGTGCCAG 58.774 50.000 0.00 0.00 0.00 4.85
3558 4622 0.110192 GCTTTGTCGTTAGTGCCAGC 60.110 55.000 0.00 0.00 0.00 4.85
3559 4623 0.517316 CTTTGTCGTTAGTGCCAGCC 59.483 55.000 0.00 0.00 0.00 4.85
3560 4624 0.887387 TTTGTCGTTAGTGCCAGCCC 60.887 55.000 0.00 0.00 0.00 5.19
3561 4625 2.046009 TTGTCGTTAGTGCCAGCCCA 62.046 55.000 0.00 0.00 0.00 5.36
3562 4626 1.078426 GTCGTTAGTGCCAGCCCAT 60.078 57.895 0.00 0.00 0.00 4.00
3563 4627 1.078497 TCGTTAGTGCCAGCCCATG 60.078 57.895 0.00 0.00 0.00 3.66
3564 4628 1.377202 CGTTAGTGCCAGCCCATGT 60.377 57.895 0.00 0.00 0.00 3.21
3565 4629 0.107897 CGTTAGTGCCAGCCCATGTA 60.108 55.000 0.00 0.00 0.00 2.29
3566 4630 1.677518 CGTTAGTGCCAGCCCATGTAA 60.678 52.381 0.00 0.00 0.00 2.41
3567 4631 2.654863 GTTAGTGCCAGCCCATGTAAT 58.345 47.619 0.00 0.00 0.00 1.89
3568 4632 2.618709 GTTAGTGCCAGCCCATGTAATC 59.381 50.000 0.00 0.00 0.00 1.75
3569 4633 0.625316 AGTGCCAGCCCATGTAATCA 59.375 50.000 0.00 0.00 0.00 2.57
3570 4634 0.740737 GTGCCAGCCCATGTAATCAC 59.259 55.000 0.00 0.00 0.00 3.06
3571 4635 0.747644 TGCCAGCCCATGTAATCACG 60.748 55.000 0.00 0.00 0.00 4.35
3572 4636 2.024918 CCAGCCCATGTAATCACGC 58.975 57.895 0.00 0.00 0.00 5.34
3573 4637 0.747644 CCAGCCCATGTAATCACGCA 60.748 55.000 0.00 0.00 0.00 5.24
3574 4638 0.659427 CAGCCCATGTAATCACGCAG 59.341 55.000 0.00 0.00 0.00 5.18
3575 4639 0.464373 AGCCCATGTAATCACGCAGG 60.464 55.000 0.00 0.00 0.00 4.85
3576 4640 2.024918 CCCATGTAATCACGCAGGC 58.975 57.895 0.00 0.00 0.00 4.85
3577 4641 1.447317 CCCATGTAATCACGCAGGCC 61.447 60.000 0.00 0.00 0.00 5.19
3578 4642 0.464373 CCATGTAATCACGCAGGCCT 60.464 55.000 0.00 0.00 0.00 5.19
3579 4643 1.382522 CATGTAATCACGCAGGCCTT 58.617 50.000 0.00 0.00 0.00 4.35
3580 4644 2.560504 CATGTAATCACGCAGGCCTTA 58.439 47.619 0.00 0.00 0.00 2.69
3581 4645 2.309528 TGTAATCACGCAGGCCTTAG 57.690 50.000 0.00 1.68 0.00 2.18
3582 4646 0.938008 GTAATCACGCAGGCCTTAGC 59.062 55.000 0.00 3.00 38.76 3.09
3583 4647 0.830648 TAATCACGCAGGCCTTAGCT 59.169 50.000 0.00 0.00 39.73 3.32
3584 4648 0.830648 AATCACGCAGGCCTTAGCTA 59.169 50.000 0.00 0.00 39.73 3.32
3585 4649 0.390860 ATCACGCAGGCCTTAGCTAG 59.609 55.000 0.00 0.00 39.73 3.42
3586 4650 1.884926 CACGCAGGCCTTAGCTAGC 60.885 63.158 0.00 6.62 39.73 3.42
3587 4651 2.060980 ACGCAGGCCTTAGCTAGCT 61.061 57.895 23.12 23.12 39.73 3.32
3588 4652 1.144936 CGCAGGCCTTAGCTAGCTT 59.855 57.895 24.88 7.25 39.73 3.74
3589 4653 0.389391 CGCAGGCCTTAGCTAGCTTA 59.611 55.000 24.88 13.59 39.73 3.09
3590 4654 1.001406 CGCAGGCCTTAGCTAGCTTAT 59.999 52.381 24.88 0.39 39.73 1.73
3591 4655 2.548920 CGCAGGCCTTAGCTAGCTTATT 60.549 50.000 24.88 0.00 39.73 1.40
3592 4656 3.481453 GCAGGCCTTAGCTAGCTTATTT 58.519 45.455 24.88 0.00 39.73 1.40
3593 4657 3.500299 GCAGGCCTTAGCTAGCTTATTTC 59.500 47.826 24.88 10.46 39.73 2.17
3594 4658 4.708177 CAGGCCTTAGCTAGCTTATTTCA 58.292 43.478 24.88 0.00 39.73 2.69
3595 4659 5.312079 CAGGCCTTAGCTAGCTTATTTCAT 58.688 41.667 24.88 3.86 39.73 2.57
3596 4660 5.411053 CAGGCCTTAGCTAGCTTATTTCATC 59.589 44.000 24.88 5.79 39.73 2.92
3597 4661 4.697828 GGCCTTAGCTAGCTTATTTCATCC 59.302 45.833 24.88 9.75 39.73 3.51
3598 4662 5.308825 GCCTTAGCTAGCTTATTTCATCCA 58.691 41.667 24.88 0.00 35.50 3.41
3599 4663 5.411053 GCCTTAGCTAGCTTATTTCATCCAG 59.589 44.000 24.88 0.00 35.50 3.86
3600 4664 5.936956 CCTTAGCTAGCTTATTTCATCCAGG 59.063 44.000 24.88 4.00 0.00 4.45
3601 4665 6.465035 CCTTAGCTAGCTTATTTCATCCAGGT 60.465 42.308 24.88 0.00 0.00 4.00
3602 4666 4.712476 AGCTAGCTTATTTCATCCAGGTG 58.288 43.478 12.68 0.00 0.00 4.00
3603 4667 4.164988 AGCTAGCTTATTTCATCCAGGTGT 59.835 41.667 12.68 0.00 0.00 4.16
3604 4668 4.884164 GCTAGCTTATTTCATCCAGGTGTT 59.116 41.667 7.70 0.00 0.00 3.32
3605 4669 6.055588 GCTAGCTTATTTCATCCAGGTGTTA 58.944 40.000 7.70 0.00 0.00 2.41
3606 4670 6.203723 GCTAGCTTATTTCATCCAGGTGTTAG 59.796 42.308 7.70 0.00 0.00 2.34
3607 4671 4.884164 AGCTTATTTCATCCAGGTGTTAGC 59.116 41.667 0.00 0.00 0.00 3.09
3608 4672 4.036852 GCTTATTTCATCCAGGTGTTAGCC 59.963 45.833 0.00 0.00 0.00 3.93
3609 4673 2.507407 TTTCATCCAGGTGTTAGCCC 57.493 50.000 0.00 0.00 0.00 5.19
3610 4674 1.367346 TTCATCCAGGTGTTAGCCCA 58.633 50.000 0.00 0.00 0.00 5.36
3611 4675 1.595311 TCATCCAGGTGTTAGCCCAT 58.405 50.000 0.00 0.00 0.00 4.00
3612 4676 1.212688 TCATCCAGGTGTTAGCCCATG 59.787 52.381 0.00 0.00 0.00 3.66
3613 4677 1.064463 CATCCAGGTGTTAGCCCATGT 60.064 52.381 0.00 0.00 0.00 3.21
3614 4678 1.959710 TCCAGGTGTTAGCCCATGTA 58.040 50.000 0.00 0.00 0.00 2.29
3615 4679 2.270858 TCCAGGTGTTAGCCCATGTAA 58.729 47.619 0.00 0.00 0.00 2.41
3616 4680 2.645297 TCCAGGTGTTAGCCCATGTAAA 59.355 45.455 0.00 0.00 0.00 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 1.138883 GCGAGCACGACCTACATCA 59.861 57.895 8.01 0.00 42.66 3.07
47 48 2.494918 GGCGAGCACGACCTACAT 59.505 61.111 8.01 0.00 42.35 2.29
48 49 4.111016 CGGCGAGCACGACCTACA 62.111 66.667 8.01 0.00 45.81 2.74
66 67 0.839277 CTGTGGGATATGTGGCTCCA 59.161 55.000 0.00 0.00 32.90 3.86
75 76 0.320771 GATTCGCCGCTGTGGGATAT 60.321 55.000 9.65 2.36 38.63 1.63
95 96 2.375345 CGACCCCAGGTAGGCCATT 61.375 63.158 5.01 0.00 35.25 3.16
101 102 0.395311 TGCTCTACGACCCCAGGTAG 60.395 60.000 0.00 0.00 35.25 3.18
191 193 2.270986 GGATCGCATGCCAATCCCC 61.271 63.158 25.99 10.96 34.14 4.81
210 212 3.573967 CCCAACAACTAGCATCTTTTGGT 59.426 43.478 0.00 0.00 39.88 3.67
212 214 3.826157 TCCCCAACAACTAGCATCTTTTG 59.174 43.478 0.00 0.00 0.00 2.44
215 217 2.025887 CCTCCCCAACAACTAGCATCTT 60.026 50.000 0.00 0.00 0.00 2.40
222 224 0.104356 TCCCACCTCCCCAACAACTA 60.104 55.000 0.00 0.00 0.00 2.24
261 263 1.805869 GCTACTAGGAGACGGCGATA 58.194 55.000 16.62 0.00 0.00 2.92
274 276 1.592400 AACGTCTGCTGGCGCTACTA 61.592 55.000 17.96 0.00 36.97 1.82
304 306 1.756375 GCTCAGCGCAATAGGTCGTG 61.756 60.000 11.47 0.00 38.92 4.35
334 339 0.171679 CCTGCATTTGAGATTGCGCA 59.828 50.000 5.66 5.66 41.80 6.09
339 344 1.386533 CTCCGCCTGCATTTGAGATT 58.613 50.000 0.00 0.00 0.00 2.40
345 350 1.604593 ACTTGCTCCGCCTGCATTT 60.605 52.632 0.00 0.00 40.34 2.32
401 438 4.406763 AGGCCGGCTCCTCCTCTT 62.407 66.667 28.56 0.00 0.00 2.85
429 466 2.459644 CATTGGATCAGCAAGGGGAAA 58.540 47.619 0.00 0.00 0.00 3.13
468 506 0.478942 TCCTACTCATCCTCCTCCCG 59.521 60.000 0.00 0.00 0.00 5.14
475 513 1.414181 CCGTTGCATCCTACTCATCCT 59.586 52.381 0.00 0.00 0.00 3.24
478 516 1.134401 CCACCGTTGCATCCTACTCAT 60.134 52.381 0.00 0.00 0.00 2.90
479 517 0.249120 CCACCGTTGCATCCTACTCA 59.751 55.000 0.00 0.00 0.00 3.41
496 535 1.153168 GAGCAAATCCTAGCCGCCA 60.153 57.895 0.00 0.00 0.00 5.69
507 550 0.249911 GAGCCCCGATACGAGCAAAT 60.250 55.000 0.00 0.00 0.00 2.32
535 582 2.193087 TTTCACTTCCTAGCCGGCCC 62.193 60.000 26.15 0.00 0.00 5.80
593 640 1.865970 CTAGCTAGTGGGTCGTAGTCG 59.134 57.143 12.92 0.00 38.55 4.18
597 644 2.860009 CCATCTAGCTAGTGGGTCGTA 58.140 52.381 23.93 5.90 0.00 3.43
607 654 5.450453 CCCTAGCTATTAGCCATCTAGCTA 58.550 45.833 12.05 9.45 44.76 3.32
614 661 1.912043 CAGGCCCTAGCTATTAGCCAT 59.088 52.381 23.36 11.06 46.35 4.40
620 667 0.753262 CGTGACAGGCCCTAGCTATT 59.247 55.000 0.00 0.00 39.73 1.73
622 669 2.423898 GCGTGACAGGCCCTAGCTA 61.424 63.158 8.98 0.00 39.73 3.32
637 684 1.081509 AAAATGAATGCGCACGCGT 60.082 47.368 14.90 5.58 45.51 6.01
691 738 0.609957 TACTCGTCCTCCGCCTTGAA 60.610 55.000 0.00 0.00 36.19 2.69
692 739 0.609957 TTACTCGTCCTCCGCCTTGA 60.610 55.000 0.00 0.00 36.19 3.02
702 749 2.126580 ACACGCGCTTACTCGTCC 60.127 61.111 5.73 0.00 34.41 4.79
709 756 4.764336 CGGACGGACACGCGCTTA 62.764 66.667 5.73 0.00 46.04 3.09
754 801 6.375455 GTCCCATTTCTGACACAAATCTATGT 59.625 38.462 0.00 0.00 0.00 2.29
756 803 5.586243 CGTCCCATTTCTGACACAAATCTAT 59.414 40.000 0.00 0.00 0.00 1.98
757 804 4.935205 CGTCCCATTTCTGACACAAATCTA 59.065 41.667 0.00 0.00 0.00 1.98
769 816 3.318313 ACATCTATCCCGTCCCATTTCT 58.682 45.455 0.00 0.00 0.00 2.52
824 871 4.817063 CGGCGCATTGGCTCAACG 62.817 66.667 10.83 0.00 42.02 4.10
828 875 1.630244 CTATAGCGGCGCATTGGCTC 61.630 60.000 35.02 0.96 42.02 4.70
853 900 4.015406 ACCCGCCGAAGACATGCA 62.015 61.111 0.00 0.00 0.00 3.96
854 901 3.499737 CACCCGCCGAAGACATGC 61.500 66.667 0.00 0.00 0.00 4.06
855 902 2.593468 ATCCACCCGCCGAAGACATG 62.593 60.000 0.00 0.00 0.00 3.21
856 903 1.046472 TATCCACCCGCCGAAGACAT 61.046 55.000 0.00 0.00 0.00 3.06
857 904 1.259142 TTATCCACCCGCCGAAGACA 61.259 55.000 0.00 0.00 0.00 3.41
860 907 1.887707 GCTTATCCACCCGCCGAAG 60.888 63.158 0.00 0.00 0.00 3.79
870 917 1.961394 CTACGGGTAGCTGCTTATCCA 59.039 52.381 7.79 0.00 0.00 3.41
871 918 1.272769 CCTACGGGTAGCTGCTTATCC 59.727 57.143 7.79 8.49 31.95 2.59
1254 1304 3.878519 GCGGAGGAGACGACGAGG 61.879 72.222 0.00 0.00 36.64 4.63
1419 1469 1.665916 GCTGAAGAGCTCGTGCACA 60.666 57.895 18.64 3.15 42.52 4.57
1518 1586 0.895100 GGTTGACTGCTTGGCCATCA 60.895 55.000 6.09 3.48 0.00 3.07
1520 1588 0.610232 GAGGTTGACTGCTTGGCCAT 60.610 55.000 6.09 0.00 0.00 4.40
1521 1589 1.228245 GAGGTTGACTGCTTGGCCA 60.228 57.895 0.00 0.00 0.00 5.36
1530 1598 1.621992 TCTTCTCGCTGAGGTTGACT 58.378 50.000 5.87 0.00 0.00 3.41
1789 1863 1.826054 CTCTCTCGTCCGCTGGGAT 60.826 63.158 0.00 0.00 46.14 3.85
1790 1864 2.438614 CTCTCTCGTCCGCTGGGA 60.439 66.667 0.00 0.00 41.08 4.37
1794 1868 1.812093 CTCGTCTCTCTCGTCCGCT 60.812 63.158 0.00 0.00 0.00 5.52
1799 1873 0.391927 CAGGTCCTCGTCTCTCTCGT 60.392 60.000 0.00 0.00 0.00 4.18
1933 2011 4.335594 AGAGCCGTGTAAAAATAAGATGGC 59.664 41.667 0.00 0.00 38.74 4.40
1936 2014 7.681939 TTTCAGAGCCGTGTAAAAATAAGAT 57.318 32.000 0.00 0.00 0.00 2.40
1937 2015 7.499321 TTTTCAGAGCCGTGTAAAAATAAGA 57.501 32.000 0.00 0.00 0.00 2.10
1938 2016 8.742554 AATTTTCAGAGCCGTGTAAAAATAAG 57.257 30.769 0.00 0.00 0.00 1.73
1944 2022 5.060506 TCAGAATTTTCAGAGCCGTGTAAA 58.939 37.500 0.00 0.00 0.00 2.01
1946 2024 4.245660 CTCAGAATTTTCAGAGCCGTGTA 58.754 43.478 0.55 0.00 34.72 2.90
1966 2191 4.253685 TGCAGTTAGTTACCATTCTGCTC 58.746 43.478 14.34 0.00 45.39 4.26
1969 2194 4.631813 GTCCTGCAGTTAGTTACCATTCTG 59.368 45.833 13.81 0.00 0.00 3.02
1970 2195 4.286032 TGTCCTGCAGTTAGTTACCATTCT 59.714 41.667 13.81 0.00 0.00 2.40
2052 2924 2.996621 GAGAACTCGTGGGTTTCTCATG 59.003 50.000 9.97 0.00 0.00 3.07
2085 2957 1.456705 GGCCTCTCTCACCTCCGAT 60.457 63.158 0.00 0.00 0.00 4.18
2109 2981 2.328099 GGTCAGCTTGTCTTGCCCG 61.328 63.158 0.00 0.00 0.00 6.13
2166 3038 1.452833 GGCCTCCTTGATCACCAGC 60.453 63.158 0.00 0.00 0.00 4.85
2469 3347 0.621082 AGTGGAAAAGGAGGCTAGCC 59.379 55.000 27.19 27.19 0.00 3.93
2589 3467 0.596082 CACATGGAACGTGGGGTTTC 59.404 55.000 0.00 0.00 39.50 2.78
2629 3507 6.647067 CCGATCTGAGGGAGTACATATTTTTC 59.353 42.308 0.00 0.00 0.00 2.29
2630 3508 6.326583 TCCGATCTGAGGGAGTACATATTTTT 59.673 38.462 0.00 0.00 0.00 1.94
2636 3514 2.489985 CCTCCGATCTGAGGGAGTACAT 60.490 54.545 22.14 0.00 46.83 2.29
2696 3609 3.736100 CAATCGTGCAAGGCCGCA 61.736 61.111 0.59 0.59 40.32 5.69
2736 3666 5.133221 AGAAACAAATGAGTACAACAGCCT 58.867 37.500 0.00 0.00 0.00 4.58
2764 3708 6.072728 CCATCGATACAACCAAAACTCTTTGA 60.073 38.462 0.00 0.00 44.03 2.69
2766 3710 6.001460 TCCATCGATACAACCAAAACTCTTT 58.999 36.000 0.00 0.00 0.00 2.52
2777 3721 6.132791 TCTACAGTTCTCCATCGATACAAC 57.867 41.667 0.00 0.00 0.00 3.32
2888 3856 2.797719 GCTTTCTAGCTGGCGAATACTC 59.202 50.000 0.00 0.00 44.27 2.59
3140 4203 8.831550 GCATCAGACCTTAAATTTAACTAGGAG 58.168 37.037 17.59 9.32 0.00 3.69
3142 4205 8.738645 AGCATCAGACCTTAAATTTAACTAGG 57.261 34.615 6.54 9.32 0.00 3.02
3181 4245 9.961264 TTTGGGTCAAACTTTAACCTTAAATTT 57.039 25.926 0.00 0.00 32.69 1.82
3182 4246 9.961264 TTTTGGGTCAAACTTTAACCTTAAATT 57.039 25.926 0.00 0.00 32.79 1.82
3225 4289 3.400255 GCTACTTCCTTCGTCTGGTTTT 58.600 45.455 0.00 0.00 0.00 2.43
3232 4296 3.967203 ATCTACGCTACTTCCTTCGTC 57.033 47.619 0.00 0.00 36.50 4.20
3236 4300 3.568853 ACGCATATCTACGCTACTTCCTT 59.431 43.478 0.00 0.00 0.00 3.36
3245 4309 6.304208 GGTAAGTAGTTAACGCATATCTACGC 59.696 42.308 0.00 0.00 39.90 4.42
3247 4311 9.688592 AATGGTAAGTAGTTAACGCATATCTAC 57.311 33.333 0.00 8.15 37.19 2.59
3282 4346 9.447157 GCAGCTTCTTAATAATGATAGATTCCT 57.553 33.333 0.00 0.00 0.00 3.36
3283 4347 9.447157 AGCAGCTTCTTAATAATGATAGATTCC 57.553 33.333 0.00 0.00 0.00 3.01
3285 4349 9.447157 GGAGCAGCTTCTTAATAATGATAGATT 57.553 33.333 0.00 0.00 0.00 2.40
3286 4350 8.046107 GGGAGCAGCTTCTTAATAATGATAGAT 58.954 37.037 0.00 0.00 0.00 1.98
3287 4351 7.390027 GGGAGCAGCTTCTTAATAATGATAGA 58.610 38.462 0.00 0.00 0.00 1.98
3288 4352 6.597280 GGGGAGCAGCTTCTTAATAATGATAG 59.403 42.308 0.00 0.00 0.00 2.08
3289 4353 6.044287 TGGGGAGCAGCTTCTTAATAATGATA 59.956 38.462 0.00 0.00 0.00 2.15
3290 4354 5.163055 TGGGGAGCAGCTTCTTAATAATGAT 60.163 40.000 0.00 0.00 0.00 2.45
3291 4355 4.165950 TGGGGAGCAGCTTCTTAATAATGA 59.834 41.667 0.00 0.00 0.00 2.57
3292 4356 4.276926 GTGGGGAGCAGCTTCTTAATAATG 59.723 45.833 0.00 0.00 0.00 1.90
3293 4357 4.166919 AGTGGGGAGCAGCTTCTTAATAAT 59.833 41.667 0.00 0.00 0.00 1.28
3294 4358 3.523564 AGTGGGGAGCAGCTTCTTAATAA 59.476 43.478 0.00 0.00 0.00 1.40
3295 4359 3.115390 AGTGGGGAGCAGCTTCTTAATA 58.885 45.455 0.00 0.00 0.00 0.98
3296 4360 1.918957 AGTGGGGAGCAGCTTCTTAAT 59.081 47.619 0.00 0.00 0.00 1.40
3297 4361 1.362224 AGTGGGGAGCAGCTTCTTAA 58.638 50.000 0.00 0.00 0.00 1.85
3298 4362 1.831736 GTAGTGGGGAGCAGCTTCTTA 59.168 52.381 0.00 0.00 0.00 2.10
3299 4363 0.615850 GTAGTGGGGAGCAGCTTCTT 59.384 55.000 0.00 0.00 0.00 2.52
3300 4364 0.545309 TGTAGTGGGGAGCAGCTTCT 60.545 55.000 0.00 0.00 0.00 2.85
3301 4365 0.543749 ATGTAGTGGGGAGCAGCTTC 59.456 55.000 0.00 0.00 0.00 3.86
3302 4366 0.543749 GATGTAGTGGGGAGCAGCTT 59.456 55.000 0.00 0.00 0.00 3.74
3303 4367 1.341156 GGATGTAGTGGGGAGCAGCT 61.341 60.000 0.00 0.00 0.00 4.24
3304 4368 1.147153 GGATGTAGTGGGGAGCAGC 59.853 63.158 0.00 0.00 0.00 5.25
3305 4369 2.088104 TAGGATGTAGTGGGGAGCAG 57.912 55.000 0.00 0.00 0.00 4.24
3306 4370 2.795291 ATAGGATGTAGTGGGGAGCA 57.205 50.000 0.00 0.00 0.00 4.26
3307 4371 4.103311 AGAAAATAGGATGTAGTGGGGAGC 59.897 45.833 0.00 0.00 0.00 4.70
3308 4372 5.366768 TGAGAAAATAGGATGTAGTGGGGAG 59.633 44.000 0.00 0.00 0.00 4.30
3309 4373 5.285401 TGAGAAAATAGGATGTAGTGGGGA 58.715 41.667 0.00 0.00 0.00 4.81
3310 4374 5.630415 TGAGAAAATAGGATGTAGTGGGG 57.370 43.478 0.00 0.00 0.00 4.96
3311 4375 6.830912 TGATGAGAAAATAGGATGTAGTGGG 58.169 40.000 0.00 0.00 0.00 4.61
3312 4376 7.094890 GCATGATGAGAAAATAGGATGTAGTGG 60.095 40.741 0.00 0.00 0.00 4.00
3313 4377 7.443272 TGCATGATGAGAAAATAGGATGTAGTG 59.557 37.037 0.00 0.00 0.00 2.74
3314 4378 7.443575 GTGCATGATGAGAAAATAGGATGTAGT 59.556 37.037 0.00 0.00 0.00 2.73
3315 4379 7.443272 TGTGCATGATGAGAAAATAGGATGTAG 59.557 37.037 0.00 0.00 0.00 2.74
3316 4380 7.227314 GTGTGCATGATGAGAAAATAGGATGTA 59.773 37.037 0.00 0.00 0.00 2.29
3317 4381 6.039047 GTGTGCATGATGAGAAAATAGGATGT 59.961 38.462 0.00 0.00 0.00 3.06
3318 4382 6.262496 AGTGTGCATGATGAGAAAATAGGATG 59.738 38.462 0.00 0.00 0.00 3.51
3319 4383 6.262496 CAGTGTGCATGATGAGAAAATAGGAT 59.738 38.462 0.00 0.00 0.00 3.24
3320 4384 5.587443 CAGTGTGCATGATGAGAAAATAGGA 59.413 40.000 0.00 0.00 0.00 2.94
3321 4385 5.356190 ACAGTGTGCATGATGAGAAAATAGG 59.644 40.000 0.00 0.00 0.00 2.57
3322 4386 6.432607 ACAGTGTGCATGATGAGAAAATAG 57.567 37.500 0.00 0.00 0.00 1.73
3323 4387 5.355071 GGACAGTGTGCATGATGAGAAAATA 59.645 40.000 10.26 0.00 0.00 1.40
3324 4388 4.157289 GGACAGTGTGCATGATGAGAAAAT 59.843 41.667 10.26 0.00 0.00 1.82
3325 4389 3.503363 GGACAGTGTGCATGATGAGAAAA 59.497 43.478 10.26 0.00 0.00 2.29
3326 4390 3.076621 GGACAGTGTGCATGATGAGAAA 58.923 45.455 10.26 0.00 0.00 2.52
3327 4391 2.038820 TGGACAGTGTGCATGATGAGAA 59.961 45.455 14.10 0.00 0.00 2.87
3328 4392 1.624813 TGGACAGTGTGCATGATGAGA 59.375 47.619 14.10 0.00 0.00 3.27
3329 4393 1.736126 GTGGACAGTGTGCATGATGAG 59.264 52.381 21.00 0.00 36.11 2.90
3330 4394 1.072015 TGTGGACAGTGTGCATGATGA 59.928 47.619 21.00 0.47 36.11 2.92
3331 4395 1.525941 TGTGGACAGTGTGCATGATG 58.474 50.000 21.00 0.00 36.11 3.07
3332 4396 2.290450 TGATGTGGACAGTGTGCATGAT 60.290 45.455 21.00 15.15 36.11 2.45
3333 4397 1.072015 TGATGTGGACAGTGTGCATGA 59.928 47.619 21.00 10.99 36.11 3.07
3334 4398 1.467342 CTGATGTGGACAGTGTGCATG 59.533 52.381 21.00 5.67 36.11 4.06
3335 4399 1.817357 CTGATGTGGACAGTGTGCAT 58.183 50.000 21.00 11.86 36.11 3.96
3336 4400 0.886043 GCTGATGTGGACAGTGTGCA 60.886 55.000 14.10 14.10 37.64 4.57
3337 4401 0.886043 TGCTGATGTGGACAGTGTGC 60.886 55.000 8.00 8.00 37.64 4.57
3338 4402 1.596603 TTGCTGATGTGGACAGTGTG 58.403 50.000 0.00 0.00 37.64 3.82
3339 4403 2.574006 ATTGCTGATGTGGACAGTGT 57.426 45.000 0.00 0.00 37.64 3.55
3340 4404 3.242969 GCATATTGCTGATGTGGACAGTG 60.243 47.826 0.00 0.00 40.96 3.66
3341 4405 2.947652 GCATATTGCTGATGTGGACAGT 59.052 45.455 0.00 0.00 40.96 3.55
3342 4406 2.292569 GGCATATTGCTGATGTGGACAG 59.707 50.000 0.00 0.00 44.28 3.51
3343 4407 2.300433 GGCATATTGCTGATGTGGACA 58.700 47.619 0.00 0.00 44.28 4.02
3344 4408 2.033801 GTGGCATATTGCTGATGTGGAC 59.966 50.000 0.00 0.00 44.28 4.02
3345 4409 2.300433 GTGGCATATTGCTGATGTGGA 58.700 47.619 0.00 0.00 44.28 4.02
3346 4410 2.025898 TGTGGCATATTGCTGATGTGG 58.974 47.619 0.00 0.00 44.28 4.17
3347 4411 3.316868 TGATGTGGCATATTGCTGATGTG 59.683 43.478 0.00 0.00 44.28 3.21
3348 4412 3.558033 TGATGTGGCATATTGCTGATGT 58.442 40.909 0.00 0.00 44.28 3.06
3349 4413 4.459337 AGATGATGTGGCATATTGCTGATG 59.541 41.667 0.00 0.00 44.28 3.07
3350 4414 4.663334 AGATGATGTGGCATATTGCTGAT 58.337 39.130 0.00 0.00 44.28 2.90
3351 4415 4.094830 AGATGATGTGGCATATTGCTGA 57.905 40.909 0.00 0.00 44.28 4.26
3352 4416 4.519350 AGAAGATGATGTGGCATATTGCTG 59.481 41.667 0.00 0.00 44.28 4.41
3353 4417 4.519350 CAGAAGATGATGTGGCATATTGCT 59.481 41.667 0.00 0.00 44.28 3.91
3354 4418 4.795268 CAGAAGATGATGTGGCATATTGC 58.205 43.478 0.00 0.00 44.08 3.56
3355 4419 4.277423 TGCAGAAGATGATGTGGCATATTG 59.723 41.667 0.00 0.00 30.52 1.90
3356 4420 4.466827 TGCAGAAGATGATGTGGCATATT 58.533 39.130 0.00 0.00 32.83 1.28
3357 4421 4.094830 TGCAGAAGATGATGTGGCATAT 57.905 40.909 0.00 0.00 0.00 1.78
3358 4422 3.564053 TGCAGAAGATGATGTGGCATA 57.436 42.857 0.00 0.00 0.00 3.14
3359 4423 2.430248 TGCAGAAGATGATGTGGCAT 57.570 45.000 0.00 0.00 0.00 4.40
3360 4424 2.430248 ATGCAGAAGATGATGTGGCA 57.570 45.000 0.00 0.00 0.00 4.92
3361 4425 6.564709 TTTATATGCAGAAGATGATGTGGC 57.435 37.500 0.00 0.00 0.00 5.01
3362 4426 9.445878 AGTATTTATATGCAGAAGATGATGTGG 57.554 33.333 0.00 0.00 0.00 4.17
3365 4429 9.770503 GCAAGTATTTATATGCAGAAGATGATG 57.229 33.333 0.00 0.00 38.63 3.07
3366 4430 8.954350 GGCAAGTATTTATATGCAGAAGATGAT 58.046 33.333 0.00 0.00 40.51 2.45
3367 4431 7.391554 GGGCAAGTATTTATATGCAGAAGATGA 59.608 37.037 0.00 0.00 40.51 2.92
3368 4432 7.362401 GGGGCAAGTATTTATATGCAGAAGATG 60.362 40.741 0.00 0.00 40.51 2.90
3369 4433 6.660949 GGGGCAAGTATTTATATGCAGAAGAT 59.339 38.462 0.00 0.00 40.51 2.40
3370 4434 6.003950 GGGGCAAGTATTTATATGCAGAAGA 58.996 40.000 0.00 0.00 40.51 2.87
3371 4435 6.006449 AGGGGCAAGTATTTATATGCAGAAG 58.994 40.000 0.00 0.00 40.51 2.85
3372 4436 5.769662 CAGGGGCAAGTATTTATATGCAGAA 59.230 40.000 0.00 0.00 40.51 3.02
3373 4437 5.163099 ACAGGGGCAAGTATTTATATGCAGA 60.163 40.000 0.00 0.00 40.51 4.26
3374 4438 5.072741 ACAGGGGCAAGTATTTATATGCAG 58.927 41.667 0.00 0.00 40.51 4.41
3375 4439 5.060427 ACAGGGGCAAGTATTTATATGCA 57.940 39.130 0.00 0.00 40.51 3.96
3376 4440 5.534654 TCAACAGGGGCAAGTATTTATATGC 59.465 40.000 0.00 0.00 38.06 3.14
3377 4441 7.765695 ATCAACAGGGGCAAGTATTTATATG 57.234 36.000 0.00 0.00 0.00 1.78
3378 4442 7.888546 GGTATCAACAGGGGCAAGTATTTATAT 59.111 37.037 0.00 0.00 0.00 0.86
3379 4443 7.228590 GGTATCAACAGGGGCAAGTATTTATA 58.771 38.462 0.00 0.00 0.00 0.98
3380 4444 6.068670 GGTATCAACAGGGGCAAGTATTTAT 58.931 40.000 0.00 0.00 0.00 1.40
3381 4445 5.442391 GGTATCAACAGGGGCAAGTATTTA 58.558 41.667 0.00 0.00 0.00 1.40
3382 4446 4.278310 GGTATCAACAGGGGCAAGTATTT 58.722 43.478 0.00 0.00 0.00 1.40
3383 4447 3.372675 GGGTATCAACAGGGGCAAGTATT 60.373 47.826 0.00 0.00 0.00 1.89
3384 4448 2.174854 GGGTATCAACAGGGGCAAGTAT 59.825 50.000 0.00 0.00 0.00 2.12
3385 4449 1.562475 GGGTATCAACAGGGGCAAGTA 59.438 52.381 0.00 0.00 0.00 2.24
3386 4450 0.331616 GGGTATCAACAGGGGCAAGT 59.668 55.000 0.00 0.00 0.00 3.16
3387 4451 0.395724 GGGGTATCAACAGGGGCAAG 60.396 60.000 0.00 0.00 0.00 4.01
3388 4452 1.694856 GGGGTATCAACAGGGGCAA 59.305 57.895 0.00 0.00 0.00 4.52
3389 4453 2.675242 CGGGGTATCAACAGGGGCA 61.675 63.158 0.00 0.00 0.00 5.36
3390 4454 2.192175 CGGGGTATCAACAGGGGC 59.808 66.667 0.00 0.00 0.00 5.80
3391 4455 1.223487 CACGGGGTATCAACAGGGG 59.777 63.158 0.00 0.00 0.00 4.79
3392 4456 0.616371 TTCACGGGGTATCAACAGGG 59.384 55.000 0.00 0.00 0.00 4.45
3393 4457 2.012051 GCTTCACGGGGTATCAACAGG 61.012 57.143 0.00 0.00 0.00 4.00
3394 4458 1.369625 GCTTCACGGGGTATCAACAG 58.630 55.000 0.00 0.00 0.00 3.16
3395 4459 0.035820 GGCTTCACGGGGTATCAACA 60.036 55.000 0.00 0.00 0.00 3.33
3396 4460 0.252197 AGGCTTCACGGGGTATCAAC 59.748 55.000 0.00 0.00 0.00 3.18
3397 4461 0.539986 GAGGCTTCACGGGGTATCAA 59.460 55.000 0.00 0.00 0.00 2.57
3398 4462 1.335132 GGAGGCTTCACGGGGTATCA 61.335 60.000 0.00 0.00 0.00 2.15
3399 4463 1.049289 AGGAGGCTTCACGGGGTATC 61.049 60.000 0.00 0.00 0.00 2.24
3400 4464 1.003051 AGGAGGCTTCACGGGGTAT 59.997 57.895 0.00 0.00 0.00 2.73
3401 4465 1.684734 GAGGAGGCTTCACGGGGTA 60.685 63.158 0.00 0.00 0.00 3.69
3402 4466 3.003763 GAGGAGGCTTCACGGGGT 61.004 66.667 0.00 0.00 0.00 4.95
3403 4467 2.592993 TTGAGGAGGCTTCACGGGG 61.593 63.158 0.00 0.00 0.00 5.73
3404 4468 1.376037 GTTGAGGAGGCTTCACGGG 60.376 63.158 0.00 0.00 0.00 5.28
3405 4469 1.738099 CGTTGAGGAGGCTTCACGG 60.738 63.158 0.00 0.00 0.00 4.94
3406 4470 0.108615 ATCGTTGAGGAGGCTTCACG 60.109 55.000 0.00 0.00 0.00 4.35
3407 4471 1.646189 GATCGTTGAGGAGGCTTCAC 58.354 55.000 0.00 0.00 0.00 3.18
3408 4472 0.173481 CGATCGTTGAGGAGGCTTCA 59.827 55.000 7.03 0.00 0.00 3.02
3409 4473 1.148759 GCGATCGTTGAGGAGGCTTC 61.149 60.000 17.81 0.00 0.00 3.86
3410 4474 1.153549 GCGATCGTTGAGGAGGCTT 60.154 57.895 17.81 0.00 0.00 4.35
3411 4475 0.752009 TAGCGATCGTTGAGGAGGCT 60.752 55.000 17.81 4.10 34.98 4.58
3412 4476 0.315568 ATAGCGATCGTTGAGGAGGC 59.684 55.000 17.81 0.00 0.00 4.70
3413 4477 2.608261 GGAATAGCGATCGTTGAGGAGG 60.608 54.545 17.81 0.00 0.00 4.30
3414 4478 2.294791 AGGAATAGCGATCGTTGAGGAG 59.705 50.000 17.81 0.00 0.00 3.69
3415 4479 2.034685 CAGGAATAGCGATCGTTGAGGA 59.965 50.000 17.81 0.00 0.00 3.71
3416 4480 2.398498 CAGGAATAGCGATCGTTGAGG 58.602 52.381 17.81 0.00 0.00 3.86
3417 4481 2.398498 CCAGGAATAGCGATCGTTGAG 58.602 52.381 17.81 0.00 0.00 3.02
3418 4482 1.538204 GCCAGGAATAGCGATCGTTGA 60.538 52.381 17.81 2.44 0.00 3.18
3419 4483 0.861837 GCCAGGAATAGCGATCGTTG 59.138 55.000 17.81 0.00 0.00 4.10
3420 4484 0.597637 CGCCAGGAATAGCGATCGTT 60.598 55.000 17.81 13.94 0.00 3.85
3421 4485 1.007271 CGCCAGGAATAGCGATCGT 60.007 57.895 17.81 6.21 0.00 3.73
3422 4486 2.375766 GCGCCAGGAATAGCGATCG 61.376 63.158 11.69 11.69 0.00 3.69
3423 4487 1.005630 AGCGCCAGGAATAGCGATC 60.006 57.895 2.29 0.00 34.34 3.69
3424 4488 1.301244 CAGCGCCAGGAATAGCGAT 60.301 57.895 2.29 0.00 34.34 4.58
3425 4489 2.106938 CAGCGCCAGGAATAGCGA 59.893 61.111 2.29 0.00 34.34 4.93
3426 4490 3.643978 GCAGCGCCAGGAATAGCG 61.644 66.667 2.29 0.00 34.34 4.26
3442 4506 4.700365 GAAAACTGTGCGGGCGGC 62.700 66.667 10.44 10.44 43.96 6.53
3443 4507 2.966309 GAGAAAACTGTGCGGGCGG 61.966 63.158 0.00 0.00 0.00 6.13
3444 4508 2.556287 GAGAAAACTGTGCGGGCG 59.444 61.111 0.00 0.00 0.00 6.13
3445 4509 2.556287 CGAGAAAACTGTGCGGGC 59.444 61.111 0.00 0.00 0.00 6.13
3446 4510 1.961277 AGCGAGAAAACTGTGCGGG 60.961 57.895 0.00 0.00 0.00 6.13
3447 4511 1.205064 CAGCGAGAAAACTGTGCGG 59.795 57.895 0.00 0.00 0.00 5.69
3448 4512 1.439365 GCAGCGAGAAAACTGTGCG 60.439 57.895 0.00 0.00 36.26 5.34
3449 4513 0.239347 ATGCAGCGAGAAAACTGTGC 59.761 50.000 0.00 0.00 36.26 4.57
3450 4514 1.400629 CCATGCAGCGAGAAAACTGTG 60.401 52.381 0.00 0.00 36.26 3.66
3451 4515 0.877071 CCATGCAGCGAGAAAACTGT 59.123 50.000 0.00 0.00 36.26 3.55
3452 4516 0.169672 CCCATGCAGCGAGAAAACTG 59.830 55.000 0.00 0.00 36.96 3.16
3453 4517 0.250901 ACCCATGCAGCGAGAAAACT 60.251 50.000 0.00 0.00 0.00 2.66
3454 4518 0.598065 AACCCATGCAGCGAGAAAAC 59.402 50.000 0.00 0.00 0.00 2.43
3455 4519 0.881118 GAACCCATGCAGCGAGAAAA 59.119 50.000 0.00 0.00 0.00 2.29
3456 4520 0.960364 GGAACCCATGCAGCGAGAAA 60.960 55.000 0.00 0.00 0.00 2.52
3457 4521 1.377202 GGAACCCATGCAGCGAGAA 60.377 57.895 0.00 0.00 0.00 2.87
3458 4522 2.268920 GGAACCCATGCAGCGAGA 59.731 61.111 0.00 0.00 0.00 4.04
3471 4535 0.386352 GTTGGCTTAAACGCGGGAAC 60.386 55.000 12.47 0.00 0.00 3.62
3472 4536 0.818445 TGTTGGCTTAAACGCGGGAA 60.818 50.000 12.47 0.00 32.47 3.97
3473 4537 0.818445 TTGTTGGCTTAAACGCGGGA 60.818 50.000 12.47 0.00 32.47 5.14
3474 4538 0.662077 GTTGTTGGCTTAAACGCGGG 60.662 55.000 12.47 0.00 32.47 6.13
3475 4539 0.309612 AGTTGTTGGCTTAAACGCGG 59.690 50.000 12.47 0.00 32.47 6.46
3476 4540 1.394697 CAGTTGTTGGCTTAAACGCG 58.605 50.000 3.53 3.53 32.47 6.01
3477 4541 1.601914 CCCAGTTGTTGGCTTAAACGC 60.602 52.381 0.00 0.00 46.32 4.84
3478 4542 1.601914 GCCCAGTTGTTGGCTTAAACG 60.602 52.381 0.00 0.00 46.32 3.60
3479 4543 2.148916 GCCCAGTTGTTGGCTTAAAC 57.851 50.000 0.00 0.00 46.32 2.01
3485 4549 1.872952 GAAAATTGCCCAGTTGTTGGC 59.127 47.619 0.00 0.00 46.32 4.52
3487 4551 3.529533 TGTGAAAATTGCCCAGTTGTTG 58.470 40.909 0.00 0.00 0.00 3.33
3488 4552 3.902881 TGTGAAAATTGCCCAGTTGTT 57.097 38.095 0.00 0.00 0.00 2.83
3489 4553 3.902881 TTGTGAAAATTGCCCAGTTGT 57.097 38.095 0.00 0.00 0.00 3.32
3490 4554 4.023878 CCATTTGTGAAAATTGCCCAGTTG 60.024 41.667 0.00 0.00 0.00 3.16
3491 4555 4.136051 CCATTTGTGAAAATTGCCCAGTT 58.864 39.130 0.00 0.00 0.00 3.16
3492 4556 3.496515 CCCATTTGTGAAAATTGCCCAGT 60.497 43.478 0.00 0.00 0.00 4.00
3493 4557 3.075884 CCCATTTGTGAAAATTGCCCAG 58.924 45.455 0.00 0.00 0.00 4.45
3494 4558 2.813354 GCCCATTTGTGAAAATTGCCCA 60.813 45.455 0.00 0.00 0.00 5.36
3495 4559 1.811965 GCCCATTTGTGAAAATTGCCC 59.188 47.619 0.00 0.00 0.00 5.36
3496 4560 2.485038 CAGCCCATTTGTGAAAATTGCC 59.515 45.455 0.00 0.00 0.00 4.52
3497 4561 2.095617 GCAGCCCATTTGTGAAAATTGC 60.096 45.455 0.00 0.00 0.00 3.56
3498 4562 2.485038 GGCAGCCCATTTGTGAAAATTG 59.515 45.455 0.00 0.00 0.00 2.32
3499 4563 2.372837 AGGCAGCCCATTTGTGAAAATT 59.627 40.909 8.22 0.00 0.00 1.82
3500 4564 1.980036 AGGCAGCCCATTTGTGAAAAT 59.020 42.857 8.22 0.00 0.00 1.82
3501 4565 1.070445 CAGGCAGCCCATTTGTGAAAA 59.930 47.619 8.22 0.00 0.00 2.29
3502 4566 0.680618 CAGGCAGCCCATTTGTGAAA 59.319 50.000 8.22 0.00 0.00 2.69
3503 4567 0.178967 TCAGGCAGCCCATTTGTGAA 60.179 50.000 8.22 0.00 0.00 3.18
3504 4568 0.040058 ATCAGGCAGCCCATTTGTGA 59.960 50.000 8.22 4.30 0.00 3.58
3505 4569 0.458669 GATCAGGCAGCCCATTTGTG 59.541 55.000 8.22 0.00 0.00 3.33
3506 4570 0.685458 GGATCAGGCAGCCCATTTGT 60.685 55.000 8.22 0.00 0.00 2.83
3507 4571 0.685131 TGGATCAGGCAGCCCATTTG 60.685 55.000 8.22 0.00 0.00 2.32
3508 4572 0.041535 TTGGATCAGGCAGCCCATTT 59.958 50.000 8.22 0.00 0.00 2.32
3509 4573 0.396695 CTTGGATCAGGCAGCCCATT 60.397 55.000 8.22 0.00 0.00 3.16
3510 4574 1.229359 CTTGGATCAGGCAGCCCAT 59.771 57.895 8.22 0.00 0.00 4.00
3511 4575 1.792757 AACTTGGATCAGGCAGCCCA 61.793 55.000 8.22 0.00 0.00 5.36
3512 4576 0.255890 TAACTTGGATCAGGCAGCCC 59.744 55.000 8.22 0.00 0.00 5.19
3513 4577 1.065126 ACTAACTTGGATCAGGCAGCC 60.065 52.381 1.84 1.84 0.00 4.85
3514 4578 2.409948 ACTAACTTGGATCAGGCAGC 57.590 50.000 0.00 0.00 0.00 5.25
3515 4579 3.133721 AGCTACTAACTTGGATCAGGCAG 59.866 47.826 0.00 0.00 0.00 4.85
3516 4580 3.107601 AGCTACTAACTTGGATCAGGCA 58.892 45.455 0.00 0.00 0.00 4.75
3517 4581 3.828875 AGCTACTAACTTGGATCAGGC 57.171 47.619 0.00 0.00 0.00 4.85
3518 4582 3.873952 GCAAGCTACTAACTTGGATCAGG 59.126 47.826 5.72 0.00 43.81 3.86
3519 4583 4.764172 AGCAAGCTACTAACTTGGATCAG 58.236 43.478 5.72 0.00 43.81 2.90
3520 4584 4.826274 AGCAAGCTACTAACTTGGATCA 57.174 40.909 5.72 0.00 43.81 2.92
3521 4585 5.412904 ACAAAGCAAGCTACTAACTTGGATC 59.587 40.000 5.72 0.00 43.81 3.36
3522 4586 5.316987 ACAAAGCAAGCTACTAACTTGGAT 58.683 37.500 5.72 0.00 43.81 3.41
3523 4587 4.714632 ACAAAGCAAGCTACTAACTTGGA 58.285 39.130 5.72 0.00 43.81 3.53
3524 4588 4.377431 CGACAAAGCAAGCTACTAACTTGG 60.377 45.833 5.72 0.00 43.81 3.61
3525 4589 4.211374 ACGACAAAGCAAGCTACTAACTTG 59.789 41.667 0.00 0.00 45.88 3.16
3526 4590 4.377897 ACGACAAAGCAAGCTACTAACTT 58.622 39.130 0.00 0.00 0.00 2.66
3527 4591 3.991367 ACGACAAAGCAAGCTACTAACT 58.009 40.909 0.00 0.00 0.00 2.24
3528 4592 4.727235 AACGACAAAGCAAGCTACTAAC 57.273 40.909 0.00 0.00 0.00 2.34
3529 4593 5.404366 CACTAACGACAAAGCAAGCTACTAA 59.596 40.000 0.00 0.00 0.00 2.24
3530 4594 4.921515 CACTAACGACAAAGCAAGCTACTA 59.078 41.667 0.00 0.00 0.00 1.82
3531 4595 3.741344 CACTAACGACAAAGCAAGCTACT 59.259 43.478 0.00 0.00 0.00 2.57
3532 4596 3.664537 GCACTAACGACAAAGCAAGCTAC 60.665 47.826 0.00 0.00 0.00 3.58
3533 4597 2.478894 GCACTAACGACAAAGCAAGCTA 59.521 45.455 0.00 0.00 0.00 3.32
3534 4598 1.264288 GCACTAACGACAAAGCAAGCT 59.736 47.619 0.00 0.00 0.00 3.74
3535 4599 1.663161 GGCACTAACGACAAAGCAAGC 60.663 52.381 0.00 0.00 0.00 4.01
3536 4600 1.601903 TGGCACTAACGACAAAGCAAG 59.398 47.619 0.00 0.00 0.00 4.01
3537 4601 1.601903 CTGGCACTAACGACAAAGCAA 59.398 47.619 0.00 0.00 0.00 3.91
3538 4602 1.225855 CTGGCACTAACGACAAAGCA 58.774 50.000 0.00 0.00 0.00 3.91
3539 4603 0.110192 GCTGGCACTAACGACAAAGC 60.110 55.000 0.00 0.00 0.00 3.51
3540 4604 0.517316 GGCTGGCACTAACGACAAAG 59.483 55.000 0.00 0.00 0.00 2.77
3541 4605 0.887387 GGGCTGGCACTAACGACAAA 60.887 55.000 2.88 0.00 0.00 2.83
3542 4606 1.302192 GGGCTGGCACTAACGACAA 60.302 57.895 2.88 0.00 0.00 3.18
3543 4607 1.836999 ATGGGCTGGCACTAACGACA 61.837 55.000 2.88 0.00 0.00 4.35
3544 4608 1.078426 ATGGGCTGGCACTAACGAC 60.078 57.895 2.88 0.00 0.00 4.34
3545 4609 1.078497 CATGGGCTGGCACTAACGA 60.078 57.895 2.88 0.00 0.00 3.85
3546 4610 0.107897 TACATGGGCTGGCACTAACG 60.108 55.000 2.88 0.00 0.00 3.18
3547 4611 2.122783 TTACATGGGCTGGCACTAAC 57.877 50.000 2.88 0.00 0.00 2.34
3548 4612 2.240921 TGATTACATGGGCTGGCACTAA 59.759 45.455 2.88 0.00 0.00 2.24
3549 4613 1.843206 TGATTACATGGGCTGGCACTA 59.157 47.619 2.88 0.00 0.00 2.74
3550 4614 0.625316 TGATTACATGGGCTGGCACT 59.375 50.000 2.88 0.00 0.00 4.40
3551 4615 0.740737 GTGATTACATGGGCTGGCAC 59.259 55.000 2.88 0.00 0.00 5.01
3552 4616 0.747644 CGTGATTACATGGGCTGGCA 60.748 55.000 2.88 0.00 0.00 4.92
3553 4617 2.024918 CGTGATTACATGGGCTGGC 58.975 57.895 0.00 0.00 0.00 4.85
3554 4618 0.747644 TGCGTGATTACATGGGCTGG 60.748 55.000 0.00 0.00 34.00 4.85
3555 4619 0.659427 CTGCGTGATTACATGGGCTG 59.341 55.000 0.00 0.00 34.00 4.85
3556 4620 0.464373 CCTGCGTGATTACATGGGCT 60.464 55.000 0.00 0.00 34.00 5.19
3557 4621 2.024918 CCTGCGTGATTACATGGGC 58.975 57.895 0.00 0.00 34.00 5.36
3558 4622 1.447317 GGCCTGCGTGATTACATGGG 61.447 60.000 0.00 0.00 34.00 4.00
3559 4623 0.464373 AGGCCTGCGTGATTACATGG 60.464 55.000 3.11 0.00 34.00 3.66
3560 4624 1.382522 AAGGCCTGCGTGATTACATG 58.617 50.000 5.69 0.00 36.24 3.21
3561 4625 2.838736 CTAAGGCCTGCGTGATTACAT 58.161 47.619 5.69 0.00 0.00 2.29
3562 4626 1.742411 GCTAAGGCCTGCGTGATTACA 60.742 52.381 5.69 0.00 0.00 2.41
3563 4627 0.938008 GCTAAGGCCTGCGTGATTAC 59.062 55.000 5.69 0.00 0.00 1.89
3564 4628 0.830648 AGCTAAGGCCTGCGTGATTA 59.169 50.000 5.69 0.00 39.73 1.75
3565 4629 0.830648 TAGCTAAGGCCTGCGTGATT 59.169 50.000 5.69 0.00 39.73 2.57
3566 4630 0.390860 CTAGCTAAGGCCTGCGTGAT 59.609 55.000 5.69 0.00 39.73 3.06
3567 4631 1.816537 CTAGCTAAGGCCTGCGTGA 59.183 57.895 5.69 0.00 39.73 4.35
3568 4632 1.884926 GCTAGCTAAGGCCTGCGTG 60.885 63.158 5.69 6.01 39.73 5.34
3569 4633 1.617947 AAGCTAGCTAAGGCCTGCGT 61.618 55.000 19.70 0.00 40.36 5.24
3570 4634 0.389391 TAAGCTAGCTAAGGCCTGCG 59.611 55.000 19.70 0.49 40.36 5.18
3571 4635 2.849294 ATAAGCTAGCTAAGGCCTGC 57.151 50.000 19.70 6.47 39.73 4.85
3572 4636 4.708177 TGAAATAAGCTAGCTAAGGCCTG 58.292 43.478 19.70 0.00 39.73 4.85
3573 4637 5.513962 GGATGAAATAAGCTAGCTAAGGCCT 60.514 44.000 19.70 0.00 39.73 5.19
3574 4638 4.697828 GGATGAAATAAGCTAGCTAAGGCC 59.302 45.833 19.70 8.42 39.73 5.19
3575 4639 5.308825 TGGATGAAATAAGCTAGCTAAGGC 58.691 41.667 19.70 7.57 39.06 4.35
3576 4640 5.936956 CCTGGATGAAATAAGCTAGCTAAGG 59.063 44.000 19.70 8.29 0.00 2.69
3577 4641 6.426328 CACCTGGATGAAATAAGCTAGCTAAG 59.574 42.308 19.70 3.30 0.00 2.18
3578 4642 6.126768 ACACCTGGATGAAATAAGCTAGCTAA 60.127 38.462 19.70 0.06 0.00 3.09
3579 4643 5.366768 ACACCTGGATGAAATAAGCTAGCTA 59.633 40.000 19.70 7.01 0.00 3.32
3580 4644 4.164988 ACACCTGGATGAAATAAGCTAGCT 59.835 41.667 12.68 12.68 0.00 3.32
3581 4645 4.455606 ACACCTGGATGAAATAAGCTAGC 58.544 43.478 6.62 6.62 0.00 3.42
3582 4646 6.203723 GCTAACACCTGGATGAAATAAGCTAG 59.796 42.308 0.00 0.00 0.00 3.42
3583 4647 6.055588 GCTAACACCTGGATGAAATAAGCTA 58.944 40.000 0.00 0.00 0.00 3.32
3584 4648 4.884164 GCTAACACCTGGATGAAATAAGCT 59.116 41.667 0.00 0.00 0.00 3.74
3585 4649 4.036852 GGCTAACACCTGGATGAAATAAGC 59.963 45.833 0.00 0.00 0.00 3.09
3586 4650 4.580580 GGGCTAACACCTGGATGAAATAAG 59.419 45.833 0.00 0.00 0.00 1.73
3587 4651 4.017958 TGGGCTAACACCTGGATGAAATAA 60.018 41.667 0.00 0.00 0.00 1.40
3588 4652 3.525609 TGGGCTAACACCTGGATGAAATA 59.474 43.478 0.00 0.00 0.00 1.40
3589 4653 2.311542 TGGGCTAACACCTGGATGAAAT 59.688 45.455 0.00 0.00 0.00 2.17
3590 4654 1.707989 TGGGCTAACACCTGGATGAAA 59.292 47.619 0.00 0.00 0.00 2.69
3591 4655 1.367346 TGGGCTAACACCTGGATGAA 58.633 50.000 0.00 0.00 0.00 2.57
3592 4656 1.212688 CATGGGCTAACACCTGGATGA 59.787 52.381 0.00 0.00 0.00 2.92
3593 4657 1.064463 ACATGGGCTAACACCTGGATG 60.064 52.381 0.00 0.00 0.00 3.51
3594 4658 1.298953 ACATGGGCTAACACCTGGAT 58.701 50.000 0.00 0.00 0.00 3.41
3595 4659 1.959710 TACATGGGCTAACACCTGGA 58.040 50.000 0.00 0.00 0.00 3.86
3596 4660 2.799126 TTACATGGGCTAACACCTGG 57.201 50.000 0.00 0.00 0.00 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.