Multiple sequence alignment - TraesCS5A01G055300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G055300 chr5A 100.000 2475 0 0 1 2475 51793458 51790984 0.000000e+00 4571.0
1 TraesCS5A01G055300 chr5A 85.470 468 60 4 916 1380 51748474 51748012 4.790000e-132 481.0
2 TraesCS5A01G055300 chr5A 77.013 770 127 28 1577 2322 594715695 594716438 1.780000e-106 396.0
3 TraesCS5A01G055300 chr5A 84.390 205 31 1 693 897 51883491 51883288 1.500000e-47 200.0
4 TraesCS5A01G055300 chr5A 82.941 170 18 6 259 428 592618773 592618931 2.570000e-30 143.0
5 TraesCS5A01G055300 chr5A 92.857 70 4 1 848 916 51748576 51748507 1.570000e-17 100.0
6 TraesCS5A01G055300 chrUn 90.539 1892 143 14 602 2475 65980231 65978358 0.000000e+00 2470.0
7 TraesCS5A01G055300 chrUn 80.845 663 67 32 820 1443 65969203 65968562 1.340000e-127 466.0
8 TraesCS5A01G055300 chrUn 81.835 534 68 19 920 1432 337950276 337950801 2.940000e-114 422.0
9 TraesCS5A01G055300 chrUn 81.750 537 69 19 920 1435 337959461 337958933 2.940000e-114 422.0
10 TraesCS5A01G055300 chrUn 84.390 205 31 1 53 256 31790562 31790358 1.500000e-47 200.0
11 TraesCS5A01G055300 chrUn 78.846 208 38 6 54 257 361606333 361606538 4.290000e-28 135.0
12 TraesCS5A01G055300 chrUn 97.727 44 1 0 523 566 65980275 65980232 2.640000e-10 76.8
13 TraesCS5A01G055300 chr5D 88.261 690 43 15 825 1509 61814187 61813531 0.000000e+00 791.0
14 TraesCS5A01G055300 chr5D 84.831 534 56 19 918 1443 61792686 61792170 4.720000e-142 514.0
15 TraesCS5A01G055300 chr5D 83.148 540 67 15 916 1443 61838378 61837851 2.880000e-129 472.0
16 TraesCS5A01G055300 chr5D 84.926 471 59 9 916 1380 62131802 62131338 1.340000e-127 466.0
17 TraesCS5A01G055300 chr5D 93.798 258 16 0 522 779 61831755 61831498 2.980000e-104 388.0
18 TraesCS5A01G055300 chr5D 85.635 181 17 6 256 428 462454800 462454621 5.440000e-42 182.0
19 TraesCS5A01G055300 chr5D 83.544 158 17 7 249 398 321613682 321613838 3.320000e-29 139.0
20 TraesCS5A01G055300 chr2A 83.921 709 103 8 1572 2273 679983272 679983976 0.000000e+00 667.0
21 TraesCS5A01G055300 chr2A 91.935 62 5 0 1596 1657 672943600 672943539 1.220000e-13 87.9
22 TraesCS5A01G055300 chr2A 76.437 174 23 10 256 428 775248249 775248093 7.340000e-11 78.7
23 TraesCS5A01G055300 chr4D 82.274 519 83 9 1758 2269 433107371 433107887 8.120000e-120 440.0
24 TraesCS5A01G055300 chr4B 76.978 695 110 29 1513 2197 576446552 576447206 3.920000e-93 351.0
25 TraesCS5A01G055300 chr3B 78.719 531 104 8 1586 2109 810255973 810256501 1.820000e-91 346.0
26 TraesCS5A01G055300 chr3B 87.192 203 25 1 53 255 531792195 531792396 1.910000e-56 230.0
27 TraesCS5A01G055300 chr3B 86.829 205 25 2 53 257 400321608 400321810 6.890000e-56 228.0
28 TraesCS5A01G055300 chr3B 83.140 172 22 5 264 428 107966278 107966107 1.530000e-32 150.0
29 TraesCS5A01G055300 chr7A 78.793 547 85 21 1631 2171 507814811 507815332 3.050000e-89 339.0
30 TraesCS5A01G055300 chr7A 100.000 32 0 0 428 459 98785133 98785164 2.660000e-05 60.2
31 TraesCS5A01G055300 chr3D 84.507 213 28 4 47 258 30238699 30238907 3.230000e-49 206.0
32 TraesCS5A01G055300 chr3A 92.063 126 10 0 54 179 528524573 528524698 7.030000e-41 178.0
33 TraesCS5A01G055300 chr3A 79.710 207 38 4 54 257 449109803 449109598 1.980000e-31 147.0
34 TraesCS5A01G055300 chr2D 84.916 179 19 5 256 428 57167584 57167760 9.100000e-40 174.0
35 TraesCS5A01G055300 chr2D 81.714 175 25 5 257 428 117184915 117184745 3.320000e-29 139.0
36 TraesCS5A01G055300 chr6A 83.333 180 24 4 256 429 614017691 614017512 7.080000e-36 161.0
37 TraesCS5A01G055300 chr6A 81.667 180 24 4 256 426 14205658 14205479 9.230000e-30 141.0
38 TraesCS5A01G055300 chr1D 80.976 205 35 4 54 255 408823599 408823396 2.550000e-35 159.0
39 TraesCS5A01G055300 chr7B 81.622 185 31 3 76 257 743546723 743546907 1.530000e-32 150.0
40 TraesCS5A01G055300 chr1A 82.184 174 26 4 256 424 565188472 565188645 7.130000e-31 145.0
41 TraesCS5A01G055300 chr1A 90.196 51 5 0 2312 2362 278463744 278463694 1.590000e-07 67.6
42 TraesCS5A01G055300 chr1A 100.000 32 0 0 427 458 449841644 449841675 2.660000e-05 60.2
43 TraesCS5A01G055300 chr6B 82.796 93 13 2 253 345 706901250 706901339 2.040000e-11 80.5
44 TraesCS5A01G055300 chr7D 100.000 35 0 0 427 461 576181430 576181464 5.710000e-07 65.8
45 TraesCS5A01G055300 chr1B 90.196 51 3 1 409 459 392530644 392530596 5.710000e-07 65.8
46 TraesCS5A01G055300 chr6D 88.679 53 4 1 409 461 84091540 84091490 2.050000e-06 63.9
47 TraesCS5A01G055300 chr6D 97.059 34 1 0 427 460 428649075 428649108 9.560000e-05 58.4
48 TraesCS5A01G055300 chr5B 96.875 32 1 0 427 458 445449899 445449868 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G055300 chr5A 51790984 51793458 2474 True 4571.0 4571 100.0000 1 2475 1 chr5A.!!$R1 2474
1 TraesCS5A01G055300 chr5A 594715695 594716438 743 False 396.0 396 77.0130 1577 2322 1 chr5A.!!$F2 745
2 TraesCS5A01G055300 chr5A 51748012 51748576 564 True 290.5 481 89.1635 848 1380 2 chr5A.!!$R3 532
3 TraesCS5A01G055300 chrUn 65978358 65980275 1917 True 1273.4 2470 94.1330 523 2475 2 chrUn.!!$R4 1952
4 TraesCS5A01G055300 chrUn 65968562 65969203 641 True 466.0 466 80.8450 820 1443 1 chrUn.!!$R2 623
5 TraesCS5A01G055300 chrUn 337950276 337950801 525 False 422.0 422 81.8350 920 1432 1 chrUn.!!$F1 512
6 TraesCS5A01G055300 chrUn 337958933 337959461 528 True 422.0 422 81.7500 920 1435 1 chrUn.!!$R3 515
7 TraesCS5A01G055300 chr5D 61813531 61814187 656 True 791.0 791 88.2610 825 1509 1 chr5D.!!$R2 684
8 TraesCS5A01G055300 chr5D 61792170 61792686 516 True 514.0 514 84.8310 918 1443 1 chr5D.!!$R1 525
9 TraesCS5A01G055300 chr5D 61837851 61838378 527 True 472.0 472 83.1480 916 1443 1 chr5D.!!$R4 527
10 TraesCS5A01G055300 chr2A 679983272 679983976 704 False 667.0 667 83.9210 1572 2273 1 chr2A.!!$F1 701
11 TraesCS5A01G055300 chr4D 433107371 433107887 516 False 440.0 440 82.2740 1758 2269 1 chr4D.!!$F1 511
12 TraesCS5A01G055300 chr4B 576446552 576447206 654 False 351.0 351 76.9780 1513 2197 1 chr4B.!!$F1 684
13 TraesCS5A01G055300 chr3B 810255973 810256501 528 False 346.0 346 78.7190 1586 2109 1 chr3B.!!$F3 523
14 TraesCS5A01G055300 chr7A 507814811 507815332 521 False 339.0 339 78.7930 1631 2171 1 chr7A.!!$F2 540

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
99 100 0.037160 GGTTGGGACCTTCGGCTTTA 59.963 55.0 0.00 0.0 42.99 1.85 F
162 163 0.106335 ATCTGCAGCCCTTCATCGAG 59.894 55.0 9.47 0.0 0.00 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1148 1201 1.107114 TCGCTGATCCTCTTCCTCAC 58.893 55.000 0.0 0.0 0.0 3.51 R
1534 1594 1.270041 TGTTTGAAGGCCCGAATTTGC 60.270 47.619 0.0 0.0 0.0 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 3.468140 GTGGCGGGGGTCTACCTC 61.468 72.222 0.00 0.00 40.03 3.85
32 33 3.680196 TGGCGGGGGTCTACCTCT 61.680 66.667 0.00 0.00 37.70 3.69
33 34 2.838693 GGCGGGGGTCTACCTCTC 60.839 72.222 0.00 0.00 37.70 3.20
34 35 2.279408 GCGGGGGTCTACCTCTCT 59.721 66.667 0.00 0.00 37.70 3.10
35 36 1.829096 GCGGGGGTCTACCTCTCTC 60.829 68.421 0.00 0.00 37.70 3.20
36 37 1.924352 CGGGGGTCTACCTCTCTCT 59.076 63.158 0.00 0.00 37.70 3.10
37 38 0.179012 CGGGGGTCTACCTCTCTCTC 60.179 65.000 0.00 0.00 37.70 3.20
38 39 0.179012 GGGGGTCTACCTCTCTCTCG 60.179 65.000 0.00 0.00 36.49 4.04
39 40 0.820482 GGGGTCTACCTCTCTCTCGC 60.820 65.000 0.00 0.00 40.03 5.03
40 41 1.161563 GGGTCTACCTCTCTCTCGCG 61.162 65.000 0.00 0.00 35.85 5.87
41 42 0.462403 GGTCTACCTCTCTCTCGCGT 60.462 60.000 5.77 0.00 0.00 6.01
42 43 0.932399 GTCTACCTCTCTCTCGCGTC 59.068 60.000 5.77 0.00 0.00 5.19
43 44 0.535797 TCTACCTCTCTCTCGCGTCA 59.464 55.000 5.77 0.00 0.00 4.35
44 45 1.139256 TCTACCTCTCTCTCGCGTCAT 59.861 52.381 5.77 0.00 0.00 3.06
45 46 1.262950 CTACCTCTCTCTCGCGTCATG 59.737 57.143 5.77 0.00 0.00 3.07
46 47 1.358402 CCTCTCTCTCGCGTCATGG 59.642 63.158 5.77 0.00 0.00 3.66
47 48 1.358402 CTCTCTCTCGCGTCATGGG 59.642 63.158 5.77 0.00 0.00 4.00
48 49 1.077716 TCTCTCTCGCGTCATGGGA 60.078 57.895 5.77 0.00 37.99 4.37
53 54 2.994995 TCGCGTCATGGGAGTGGT 60.995 61.111 5.77 0.00 34.10 4.16
54 55 2.815211 CGCGTCATGGGAGTGGTG 60.815 66.667 0.00 0.00 0.00 4.17
55 56 2.347490 GCGTCATGGGAGTGGTGT 59.653 61.111 0.00 0.00 0.00 4.16
56 57 2.034879 GCGTCATGGGAGTGGTGTG 61.035 63.158 0.00 0.00 0.00 3.82
57 58 1.671166 CGTCATGGGAGTGGTGTGA 59.329 57.895 0.00 0.00 0.00 3.58
58 59 0.670546 CGTCATGGGAGTGGTGTGAC 60.671 60.000 0.00 0.00 36.67 3.67
59 60 0.321653 GTCATGGGAGTGGTGTGACC 60.322 60.000 0.00 0.00 39.22 4.02
60 61 1.002134 CATGGGAGTGGTGTGACCC 60.002 63.158 0.00 0.00 37.50 4.46
62 63 2.146724 TGGGAGTGGTGTGACCCAG 61.147 63.158 0.00 0.00 46.04 4.45
63 64 1.841556 GGGAGTGGTGTGACCCAGA 60.842 63.158 0.00 0.00 41.72 3.86
64 65 1.371558 GGAGTGGTGTGACCCAGAC 59.628 63.158 0.00 0.00 37.50 3.51
65 66 1.371558 GAGTGGTGTGACCCAGACC 59.628 63.158 6.35 6.35 46.31 3.85
66 67 2.113243 GAGTGGTGTGACCCAGACCC 62.113 65.000 10.23 3.12 45.67 4.46
67 68 3.238497 TGGTGTGACCCAGACCCG 61.238 66.667 10.23 0.00 45.67 5.28
68 69 4.016706 GGTGTGACCCAGACCCGG 62.017 72.222 0.00 0.00 41.24 5.73
69 70 4.699522 GTGTGACCCAGACCCGGC 62.700 72.222 0.00 0.00 0.00 6.13
71 72 3.948719 GTGACCCAGACCCGGCAA 61.949 66.667 0.00 0.00 0.00 4.52
72 73 2.933287 TGACCCAGACCCGGCAAT 60.933 61.111 0.00 0.00 0.00 3.56
73 74 2.355115 GACCCAGACCCGGCAATT 59.645 61.111 0.00 0.00 0.00 2.32
74 75 1.749258 GACCCAGACCCGGCAATTC 60.749 63.158 0.00 0.00 0.00 2.17
75 76 2.824041 CCCAGACCCGGCAATTCG 60.824 66.667 0.00 0.00 0.00 3.34
82 83 3.061848 CCGGCAATTCGGCTTGGT 61.062 61.111 0.00 0.00 43.71 3.67
83 84 2.635443 CCGGCAATTCGGCTTGGTT 61.635 57.895 0.00 0.00 43.71 3.67
84 85 1.444212 CGGCAATTCGGCTTGGTTG 60.444 57.895 0.00 0.00 38.27 3.77
85 86 1.079888 GGCAATTCGGCTTGGTTGG 60.080 57.895 0.00 0.00 37.17 3.77
86 87 1.079888 GCAATTCGGCTTGGTTGGG 60.080 57.895 1.07 0.00 0.00 4.12
87 88 1.531739 GCAATTCGGCTTGGTTGGGA 61.532 55.000 1.07 0.00 0.00 4.37
88 89 0.243636 CAATTCGGCTTGGTTGGGAC 59.756 55.000 0.00 0.00 0.00 4.46
89 90 0.898326 AATTCGGCTTGGTTGGGACC 60.898 55.000 0.00 0.00 46.71 4.46
90 91 1.789576 ATTCGGCTTGGTTGGGACCT 61.790 55.000 0.00 0.00 46.66 3.85
91 92 2.002018 TTCGGCTTGGTTGGGACCTT 62.002 55.000 0.00 0.00 46.66 3.50
92 93 1.971695 CGGCTTGGTTGGGACCTTC 60.972 63.158 0.00 0.00 46.66 3.46
93 94 1.971695 GGCTTGGTTGGGACCTTCG 60.972 63.158 0.00 0.00 46.66 3.79
94 95 1.971695 GCTTGGTTGGGACCTTCGG 60.972 63.158 0.00 0.00 46.66 4.30
95 96 1.971695 CTTGGTTGGGACCTTCGGC 60.972 63.158 0.00 0.00 46.66 5.54
96 97 2.411765 CTTGGTTGGGACCTTCGGCT 62.412 60.000 0.00 0.00 46.66 5.52
97 98 2.002018 TTGGTTGGGACCTTCGGCTT 62.002 55.000 0.00 0.00 46.66 4.35
98 99 1.228459 GGTTGGGACCTTCGGCTTT 60.228 57.895 0.00 0.00 42.99 3.51
99 100 0.037160 GGTTGGGACCTTCGGCTTTA 59.963 55.000 0.00 0.00 42.99 1.85
100 101 1.450025 GTTGGGACCTTCGGCTTTAG 58.550 55.000 0.00 0.00 0.00 1.85
101 102 1.002773 GTTGGGACCTTCGGCTTTAGA 59.997 52.381 0.00 0.00 0.00 2.10
102 103 1.580059 TGGGACCTTCGGCTTTAGAT 58.420 50.000 0.00 0.00 0.00 1.98
103 104 1.209504 TGGGACCTTCGGCTTTAGATG 59.790 52.381 0.00 0.00 0.00 2.90
104 105 1.209747 GGGACCTTCGGCTTTAGATGT 59.790 52.381 0.00 0.00 0.00 3.06
105 106 2.355818 GGGACCTTCGGCTTTAGATGTT 60.356 50.000 0.00 0.00 0.00 2.71
106 107 2.678336 GGACCTTCGGCTTTAGATGTTG 59.322 50.000 0.00 0.00 0.00 3.33
107 108 2.678336 GACCTTCGGCTTTAGATGTTGG 59.322 50.000 0.00 0.00 0.00 3.77
108 109 2.017049 CCTTCGGCTTTAGATGTTGGG 58.983 52.381 0.00 0.00 0.00 4.12
109 110 1.401905 CTTCGGCTTTAGATGTTGGGC 59.598 52.381 0.00 0.00 0.00 5.36
110 111 0.618458 TCGGCTTTAGATGTTGGGCT 59.382 50.000 0.00 0.00 0.00 5.19
111 112 1.004277 TCGGCTTTAGATGTTGGGCTT 59.996 47.619 0.00 0.00 0.00 4.35
112 113 1.818674 CGGCTTTAGATGTTGGGCTTT 59.181 47.619 0.00 0.00 0.00 3.51
113 114 2.415893 CGGCTTTAGATGTTGGGCTTTG 60.416 50.000 0.00 0.00 0.00 2.77
114 115 2.094026 GGCTTTAGATGTTGGGCTTTGG 60.094 50.000 0.00 0.00 0.00 3.28
115 116 2.562738 GCTTTAGATGTTGGGCTTTGGT 59.437 45.455 0.00 0.00 0.00 3.67
116 117 3.614870 GCTTTAGATGTTGGGCTTTGGTG 60.615 47.826 0.00 0.00 0.00 4.17
117 118 2.969821 TAGATGTTGGGCTTTGGTGT 57.030 45.000 0.00 0.00 0.00 4.16
118 119 1.331214 AGATGTTGGGCTTTGGTGTG 58.669 50.000 0.00 0.00 0.00 3.82
119 120 1.133513 AGATGTTGGGCTTTGGTGTGA 60.134 47.619 0.00 0.00 0.00 3.58
120 121 1.270550 GATGTTGGGCTTTGGTGTGAG 59.729 52.381 0.00 0.00 0.00 3.51
121 122 0.257328 TGTTGGGCTTTGGTGTGAGA 59.743 50.000 0.00 0.00 0.00 3.27
122 123 1.133513 TGTTGGGCTTTGGTGTGAGAT 60.134 47.619 0.00 0.00 0.00 2.75
123 124 1.963515 GTTGGGCTTTGGTGTGAGATT 59.036 47.619 0.00 0.00 0.00 2.40
124 125 2.365293 GTTGGGCTTTGGTGTGAGATTT 59.635 45.455 0.00 0.00 0.00 2.17
125 126 1.962807 TGGGCTTTGGTGTGAGATTTG 59.037 47.619 0.00 0.00 0.00 2.32
126 127 1.273327 GGGCTTTGGTGTGAGATTTGG 59.727 52.381 0.00 0.00 0.00 3.28
127 128 1.273327 GGCTTTGGTGTGAGATTTGGG 59.727 52.381 0.00 0.00 0.00 4.12
128 129 1.963515 GCTTTGGTGTGAGATTTGGGT 59.036 47.619 0.00 0.00 0.00 4.51
129 130 3.153919 GCTTTGGTGTGAGATTTGGGTA 58.846 45.455 0.00 0.00 0.00 3.69
130 131 3.763897 GCTTTGGTGTGAGATTTGGGTAT 59.236 43.478 0.00 0.00 0.00 2.73
131 132 4.380867 GCTTTGGTGTGAGATTTGGGTATG 60.381 45.833 0.00 0.00 0.00 2.39
132 133 2.722094 TGGTGTGAGATTTGGGTATGC 58.278 47.619 0.00 0.00 0.00 3.14
133 134 1.670811 GGTGTGAGATTTGGGTATGCG 59.329 52.381 0.00 0.00 0.00 4.73
134 135 1.670811 GTGTGAGATTTGGGTATGCGG 59.329 52.381 0.00 0.00 0.00 5.69
135 136 0.663153 GTGAGATTTGGGTATGCGGC 59.337 55.000 0.00 0.00 0.00 6.53
136 137 0.465460 TGAGATTTGGGTATGCGGCC 60.465 55.000 0.00 0.00 0.00 6.13
137 138 1.152756 AGATTTGGGTATGCGGCCC 60.153 57.895 0.00 3.37 46.26 5.80
138 139 2.123468 ATTTGGGTATGCGGCCCC 60.123 61.111 5.90 5.90 45.49 5.80
139 140 4.805768 TTTGGGTATGCGGCCCCG 62.806 66.667 1.59 1.59 45.49 5.73
143 144 4.476752 GGTATGCGGCCCCGACAA 62.477 66.667 11.48 0.00 42.83 3.18
144 145 2.203153 GTATGCGGCCCCGACAAT 60.203 61.111 11.48 3.33 42.83 2.71
145 146 2.110213 TATGCGGCCCCGACAATC 59.890 61.111 11.48 0.00 42.83 2.67
146 147 2.439960 TATGCGGCCCCGACAATCT 61.440 57.895 11.48 0.00 42.83 2.40
147 148 2.658679 TATGCGGCCCCGACAATCTG 62.659 60.000 11.48 0.00 42.83 2.90
149 150 4.776322 CGGCCCCGACAATCTGCA 62.776 66.667 0.00 0.00 42.83 4.41
150 151 2.825836 GGCCCCGACAATCTGCAG 60.826 66.667 7.63 7.63 0.00 4.41
151 152 3.512516 GCCCCGACAATCTGCAGC 61.513 66.667 9.47 0.00 0.00 5.25
152 153 2.825836 CCCCGACAATCTGCAGCC 60.826 66.667 9.47 0.00 0.00 4.85
153 154 2.825836 CCCGACAATCTGCAGCCC 60.826 66.667 9.47 0.00 0.00 5.19
154 155 2.270205 CCGACAATCTGCAGCCCT 59.730 61.111 9.47 0.00 0.00 5.19
155 156 1.377725 CCGACAATCTGCAGCCCTT 60.378 57.895 9.47 0.00 0.00 3.95
156 157 1.372087 CCGACAATCTGCAGCCCTTC 61.372 60.000 9.47 2.01 0.00 3.46
157 158 0.674581 CGACAATCTGCAGCCCTTCA 60.675 55.000 9.47 0.00 0.00 3.02
158 159 1.760192 GACAATCTGCAGCCCTTCAT 58.240 50.000 9.47 0.00 0.00 2.57
159 160 1.674962 GACAATCTGCAGCCCTTCATC 59.325 52.381 9.47 0.00 0.00 2.92
160 161 0.661552 CAATCTGCAGCCCTTCATCG 59.338 55.000 9.47 0.00 0.00 3.84
161 162 0.543277 AATCTGCAGCCCTTCATCGA 59.457 50.000 9.47 0.00 0.00 3.59
162 163 0.106335 ATCTGCAGCCCTTCATCGAG 59.894 55.000 9.47 0.00 0.00 4.04
163 164 1.220206 CTGCAGCCCTTCATCGAGT 59.780 57.895 0.00 0.00 0.00 4.18
164 165 0.392193 CTGCAGCCCTTCATCGAGTT 60.392 55.000 0.00 0.00 0.00 3.01
165 166 0.674581 TGCAGCCCTTCATCGAGTTG 60.675 55.000 0.00 0.00 0.00 3.16
166 167 0.391661 GCAGCCCTTCATCGAGTTGA 60.392 55.000 0.00 0.00 0.00 3.18
167 168 1.745141 GCAGCCCTTCATCGAGTTGAT 60.745 52.381 0.00 0.00 38.01 2.57
168 169 2.483714 GCAGCCCTTCATCGAGTTGATA 60.484 50.000 0.00 0.00 34.83 2.15
169 170 3.388308 CAGCCCTTCATCGAGTTGATAG 58.612 50.000 0.00 0.00 34.83 2.08
170 171 2.366916 AGCCCTTCATCGAGTTGATAGG 59.633 50.000 2.99 2.99 34.83 2.57
171 172 2.365617 GCCCTTCATCGAGTTGATAGGA 59.634 50.000 9.93 0.00 34.83 2.94
172 173 3.553922 GCCCTTCATCGAGTTGATAGGAG 60.554 52.174 9.93 2.23 34.83 3.69
173 174 3.639094 CCCTTCATCGAGTTGATAGGAGT 59.361 47.826 9.93 0.00 34.83 3.85
174 175 4.827835 CCCTTCATCGAGTTGATAGGAGTA 59.172 45.833 9.93 0.00 34.83 2.59
175 176 5.048364 CCCTTCATCGAGTTGATAGGAGTAG 60.048 48.000 9.93 0.00 34.83 2.57
176 177 5.440234 TTCATCGAGTTGATAGGAGTAGC 57.560 43.478 0.00 0.00 34.83 3.58
177 178 3.498777 TCATCGAGTTGATAGGAGTAGCG 59.501 47.826 0.00 0.00 34.83 4.26
178 179 3.189618 TCGAGTTGATAGGAGTAGCGA 57.810 47.619 0.00 0.00 0.00 4.93
179 180 3.741249 TCGAGTTGATAGGAGTAGCGAT 58.259 45.455 0.00 0.00 0.00 4.58
180 181 4.891260 TCGAGTTGATAGGAGTAGCGATA 58.109 43.478 0.00 0.00 0.00 2.92
181 182 4.930405 TCGAGTTGATAGGAGTAGCGATAG 59.070 45.833 0.00 0.00 0.00 2.08
182 183 4.691685 CGAGTTGATAGGAGTAGCGATAGT 59.308 45.833 0.00 0.00 39.35 2.12
183 184 5.179742 CGAGTTGATAGGAGTAGCGATAGTT 59.820 44.000 0.00 0.00 39.35 2.24
184 185 6.320494 AGTTGATAGGAGTAGCGATAGTTG 57.680 41.667 0.00 0.00 39.35 3.16
185 186 5.828859 AGTTGATAGGAGTAGCGATAGTTGT 59.171 40.000 0.00 0.00 39.35 3.32
186 187 6.321690 AGTTGATAGGAGTAGCGATAGTTGTT 59.678 38.462 0.00 0.00 39.35 2.83
187 188 6.073327 TGATAGGAGTAGCGATAGTTGTTG 57.927 41.667 0.00 0.00 39.35 3.33
188 189 3.166489 AGGAGTAGCGATAGTTGTTGC 57.834 47.619 0.00 0.00 39.35 4.17
189 190 2.761208 AGGAGTAGCGATAGTTGTTGCT 59.239 45.455 0.00 0.00 41.62 3.91
190 191 3.952323 AGGAGTAGCGATAGTTGTTGCTA 59.048 43.478 0.00 0.00 39.52 3.49
191 192 4.401519 AGGAGTAGCGATAGTTGTTGCTAA 59.598 41.667 0.08 0.00 41.49 3.09
192 193 4.740695 GGAGTAGCGATAGTTGTTGCTAAG 59.259 45.833 0.08 0.00 41.49 2.18
193 194 5.450137 GGAGTAGCGATAGTTGTTGCTAAGA 60.450 44.000 0.08 0.00 41.49 2.10
194 195 6.150396 AGTAGCGATAGTTGTTGCTAAGAT 57.850 37.500 0.08 0.00 41.49 2.40
195 196 7.273320 AGTAGCGATAGTTGTTGCTAAGATA 57.727 36.000 0.08 0.00 41.49 1.98
196 197 7.713750 AGTAGCGATAGTTGTTGCTAAGATAA 58.286 34.615 0.08 0.00 41.49 1.75
197 198 8.361139 AGTAGCGATAGTTGTTGCTAAGATAAT 58.639 33.333 0.08 0.00 41.49 1.28
198 199 9.622004 GTAGCGATAGTTGTTGCTAAGATAATA 57.378 33.333 0.08 0.00 41.49 0.98
199 200 8.749841 AGCGATAGTTGTTGCTAAGATAATAG 57.250 34.615 0.00 0.00 37.07 1.73
200 201 7.329717 AGCGATAGTTGTTGCTAAGATAATAGC 59.670 37.037 0.00 0.00 43.14 2.97
201 202 7.329717 GCGATAGTTGTTGCTAAGATAATAGCT 59.670 37.037 7.71 0.00 43.20 3.32
202 203 9.197694 CGATAGTTGTTGCTAAGATAATAGCTT 57.802 33.333 0.00 0.00 46.74 3.74
205 206 8.430801 AGTTGTTGCTAAGATAATAGCTTCAG 57.569 34.615 0.00 0.00 46.74 3.02
206 207 8.260818 AGTTGTTGCTAAGATAATAGCTTCAGA 58.739 33.333 0.00 0.00 46.74 3.27
207 208 8.331742 GTTGTTGCTAAGATAATAGCTTCAGAC 58.668 37.037 0.00 0.00 46.74 3.51
208 209 7.786030 TGTTGCTAAGATAATAGCTTCAGACT 58.214 34.615 0.00 0.00 46.74 3.24
209 210 8.260818 TGTTGCTAAGATAATAGCTTCAGACTT 58.739 33.333 0.00 0.00 46.74 3.01
210 211 9.751542 GTTGCTAAGATAATAGCTTCAGACTTA 57.248 33.333 0.00 0.00 46.74 2.24
239 240 7.921786 TGTATTCCTTTGTAAGATCTTGGTG 57.078 36.000 18.47 3.92 0.00 4.17
240 241 7.685481 TGTATTCCTTTGTAAGATCTTGGTGA 58.315 34.615 18.47 4.55 0.00 4.02
241 242 8.160765 TGTATTCCTTTGTAAGATCTTGGTGAA 58.839 33.333 18.47 11.41 0.00 3.18
242 243 6.877611 TTCCTTTGTAAGATCTTGGTGAAC 57.122 37.500 18.47 8.21 0.00 3.18
243 244 5.935945 TCCTTTGTAAGATCTTGGTGAACA 58.064 37.500 18.47 10.79 0.00 3.18
244 245 6.361433 TCCTTTGTAAGATCTTGGTGAACAA 58.639 36.000 18.47 15.92 37.55 2.83
245 246 7.004086 TCCTTTGTAAGATCTTGGTGAACAAT 58.996 34.615 18.47 0.00 38.65 2.71
246 247 7.505585 TCCTTTGTAAGATCTTGGTGAACAATT 59.494 33.333 18.47 0.00 38.65 2.32
247 248 7.596248 CCTTTGTAAGATCTTGGTGAACAATTG 59.404 37.037 18.47 13.63 38.65 2.32
248 249 7.815840 TTGTAAGATCTTGGTGAACAATTGA 57.184 32.000 18.47 0.00 38.65 2.57
249 250 8.408043 TTGTAAGATCTTGGTGAACAATTGAT 57.592 30.769 18.47 0.00 38.65 2.57
250 251 9.513906 TTGTAAGATCTTGGTGAACAATTGATA 57.486 29.630 18.47 0.00 38.65 2.15
251 252 9.513906 TGTAAGATCTTGGTGAACAATTGATAA 57.486 29.630 18.47 0.00 38.65 1.75
255 256 9.865321 AGATCTTGGTGAACAATTGATAAAATG 57.135 29.630 13.59 0.00 38.65 2.32
256 257 9.090692 GATCTTGGTGAACAATTGATAAAATGG 57.909 33.333 13.59 0.00 38.65 3.16
257 258 7.961351 TCTTGGTGAACAATTGATAAAATGGT 58.039 30.769 13.59 0.00 38.65 3.55
258 259 7.871973 TCTTGGTGAACAATTGATAAAATGGTG 59.128 33.333 13.59 0.00 38.65 4.17
259 260 7.060383 TGGTGAACAATTGATAAAATGGTGT 57.940 32.000 13.59 0.00 0.00 4.16
260 261 6.927936 TGGTGAACAATTGATAAAATGGTGTG 59.072 34.615 13.59 0.00 0.00 3.82
261 262 7.151308 GGTGAACAATTGATAAAATGGTGTGA 58.849 34.615 13.59 0.00 0.00 3.58
262 263 7.116233 GGTGAACAATTGATAAAATGGTGTGAC 59.884 37.037 13.59 0.00 0.00 3.67
263 264 7.867403 GTGAACAATTGATAAAATGGTGTGACT 59.133 33.333 13.59 0.00 0.00 3.41
264 265 9.072375 TGAACAATTGATAAAATGGTGTGACTA 57.928 29.630 13.59 0.00 0.00 2.59
265 266 9.559958 GAACAATTGATAAAATGGTGTGACTAG 57.440 33.333 13.59 0.00 0.00 2.57
266 267 8.055279 ACAATTGATAAAATGGTGTGACTAGG 57.945 34.615 13.59 0.00 0.00 3.02
267 268 7.669722 ACAATTGATAAAATGGTGTGACTAGGT 59.330 33.333 13.59 0.00 0.00 3.08
268 269 7.865706 ATTGATAAAATGGTGTGACTAGGTC 57.134 36.000 0.00 0.00 0.00 3.85
269 270 6.620877 TGATAAAATGGTGTGACTAGGTCT 57.379 37.500 0.00 0.00 33.15 3.85
270 271 6.640518 TGATAAAATGGTGTGACTAGGTCTC 58.359 40.000 0.00 0.00 33.15 3.36
271 272 4.974645 AAAATGGTGTGACTAGGTCTCA 57.025 40.909 0.00 0.00 34.38 3.27
272 273 4.543590 AAATGGTGTGACTAGGTCTCAG 57.456 45.455 0.00 0.00 36.86 3.35
273 274 2.677542 TGGTGTGACTAGGTCTCAGT 57.322 50.000 0.00 0.00 36.86 3.41
274 275 2.515854 TGGTGTGACTAGGTCTCAGTC 58.484 52.381 0.00 0.00 42.31 3.51
275 276 1.469308 GGTGTGACTAGGTCTCAGTCG 59.531 57.143 0.00 0.00 44.44 4.18
276 277 2.424557 GTGTGACTAGGTCTCAGTCGA 58.575 52.381 0.00 0.00 44.44 4.20
277 278 2.160022 GTGTGACTAGGTCTCAGTCGAC 59.840 54.545 7.70 7.70 44.44 4.20
278 279 2.038689 TGTGACTAGGTCTCAGTCGACT 59.961 50.000 13.58 13.58 44.44 4.18
279 280 2.417239 GTGACTAGGTCTCAGTCGACTG 59.583 54.545 34.76 34.76 44.44 3.51
280 281 2.011222 GACTAGGTCTCAGTCGACTGG 58.989 57.143 37.82 28.95 43.91 4.00
281 282 1.340211 ACTAGGTCTCAGTCGACTGGG 60.340 57.143 37.82 36.48 45.72 4.45
291 292 5.414789 TCAGTCGACTGGGATTTAATCAA 57.585 39.130 37.82 16.73 43.91 2.57
292 293 5.800296 TCAGTCGACTGGGATTTAATCAAA 58.200 37.500 37.82 16.54 43.91 2.69
293 294 6.414732 TCAGTCGACTGGGATTTAATCAAAT 58.585 36.000 37.82 0.84 43.91 2.32
294 295 6.538742 TCAGTCGACTGGGATTTAATCAAATC 59.461 38.462 37.82 0.00 43.68 2.17
295 296 6.540189 CAGTCGACTGGGATTTAATCAAATCT 59.460 38.462 33.36 0.00 41.72 2.40
304 305 8.585189 GGGATTTAATCAAATCTCAATCAAGC 57.415 34.615 7.29 0.00 46.73 4.01
305 306 7.380602 GGGATTTAATCAAATCTCAATCAAGCG 59.619 37.037 7.29 0.00 46.73 4.68
306 307 8.131100 GGATTTAATCAAATCTCAATCAAGCGA 58.869 33.333 7.29 0.00 46.26 4.93
307 308 9.507280 GATTTAATCAAATCTCAATCAAGCGAA 57.493 29.630 0.00 0.00 44.47 4.70
308 309 9.859427 ATTTAATCAAATCTCAATCAAGCGAAA 57.141 25.926 0.00 0.00 27.60 3.46
309 310 9.859427 TTTAATCAAATCTCAATCAAGCGAAAT 57.141 25.926 0.00 0.00 0.00 2.17
312 313 8.847444 ATCAAATCTCAATCAAGCGAAATAAC 57.153 30.769 0.00 0.00 0.00 1.89
313 314 7.815641 TCAAATCTCAATCAAGCGAAATAACA 58.184 30.769 0.00 0.00 0.00 2.41
314 315 8.461222 TCAAATCTCAATCAAGCGAAATAACAT 58.539 29.630 0.00 0.00 0.00 2.71
315 316 8.529102 CAAATCTCAATCAAGCGAAATAACATG 58.471 33.333 0.00 0.00 0.00 3.21
316 317 5.572211 TCTCAATCAAGCGAAATAACATGC 58.428 37.500 0.00 0.00 0.00 4.06
317 318 5.123661 TCTCAATCAAGCGAAATAACATGCA 59.876 36.000 0.00 0.00 0.00 3.96
318 319 5.707931 TCAATCAAGCGAAATAACATGCAA 58.292 33.333 0.00 0.00 0.00 4.08
319 320 5.801444 TCAATCAAGCGAAATAACATGCAAG 59.199 36.000 0.00 0.00 0.00 4.01
320 321 5.565592 ATCAAGCGAAATAACATGCAAGA 57.434 34.783 0.00 0.00 0.00 3.02
321 322 5.369685 TCAAGCGAAATAACATGCAAGAA 57.630 34.783 0.00 0.00 0.00 2.52
322 323 5.767269 TCAAGCGAAATAACATGCAAGAAA 58.233 33.333 0.00 0.00 0.00 2.52
323 324 5.858049 TCAAGCGAAATAACATGCAAGAAAG 59.142 36.000 0.00 0.00 0.00 2.62
324 325 5.627499 AGCGAAATAACATGCAAGAAAGA 57.373 34.783 0.00 0.00 0.00 2.52
325 326 5.634896 AGCGAAATAACATGCAAGAAAGAG 58.365 37.500 0.00 0.00 0.00 2.85
326 327 5.412594 AGCGAAATAACATGCAAGAAAGAGA 59.587 36.000 0.00 0.00 0.00 3.10
327 328 6.072508 AGCGAAATAACATGCAAGAAAGAGAA 60.073 34.615 0.00 0.00 0.00 2.87
328 329 6.582295 GCGAAATAACATGCAAGAAAGAGAAA 59.418 34.615 0.00 0.00 0.00 2.52
329 330 7.114811 GCGAAATAACATGCAAGAAAGAGAAAA 59.885 33.333 0.00 0.00 0.00 2.29
330 331 8.633408 CGAAATAACATGCAAGAAAGAGAAAAG 58.367 33.333 0.00 0.00 0.00 2.27
331 332 9.683069 GAAATAACATGCAAGAAAGAGAAAAGA 57.317 29.630 0.00 0.00 0.00 2.52
335 336 7.761651 ACATGCAAGAAAGAGAAAAGAAAAC 57.238 32.000 0.00 0.00 0.00 2.43
336 337 7.550712 ACATGCAAGAAAGAGAAAAGAAAACT 58.449 30.769 0.00 0.00 0.00 2.66
337 338 8.686334 ACATGCAAGAAAGAGAAAAGAAAACTA 58.314 29.630 0.00 0.00 0.00 2.24
338 339 9.520204 CATGCAAGAAAGAGAAAAGAAAACTAA 57.480 29.630 0.00 0.00 0.00 2.24
340 341 9.921637 TGCAAGAAAGAGAAAAGAAAACTAAAA 57.078 25.926 0.00 0.00 0.00 1.52
372 373 8.450964 ACACCAATTTTAATGTAAGATCTCACG 58.549 33.333 0.00 0.00 0.00 4.35
373 374 7.910162 CACCAATTTTAATGTAAGATCTCACGG 59.090 37.037 0.00 0.00 0.00 4.94
374 375 7.827236 ACCAATTTTAATGTAAGATCTCACGGA 59.173 33.333 0.00 0.00 0.00 4.69
375 376 8.840321 CCAATTTTAATGTAAGATCTCACGGAT 58.160 33.333 0.00 0.00 37.37 4.18
384 385 8.421673 TGTAAGATCTCACGGATATAGTATCG 57.578 38.462 0.00 0.00 34.33 2.92
385 386 8.255905 TGTAAGATCTCACGGATATAGTATCGA 58.744 37.037 0.00 0.00 34.33 3.59
386 387 7.542534 AAGATCTCACGGATATAGTATCGAC 57.457 40.000 0.00 0.00 34.33 4.20
387 388 6.880484 AGATCTCACGGATATAGTATCGACT 58.120 40.000 0.00 0.00 35.77 4.18
388 389 6.759356 AGATCTCACGGATATAGTATCGACTG 59.241 42.308 0.00 0.00 34.33 3.51
389 390 6.034161 TCTCACGGATATAGTATCGACTGA 57.966 41.667 0.00 0.00 36.28 3.41
390 391 6.100668 TCTCACGGATATAGTATCGACTGAG 58.899 44.000 0.00 0.00 36.28 3.35
391 392 6.034161 TCACGGATATAGTATCGACTGAGA 57.966 41.667 0.00 0.00 36.28 3.27
392 393 5.868258 TCACGGATATAGTATCGACTGAGAC 59.132 44.000 0.00 0.00 36.28 3.36
394 395 6.369340 CACGGATATAGTATCGACTGAGACTT 59.631 42.308 0.00 0.00 43.97 3.01
395 396 7.544915 CACGGATATAGTATCGACTGAGACTTA 59.455 40.741 0.00 0.00 43.97 2.24
396 397 8.093307 ACGGATATAGTATCGACTGAGACTTAA 58.907 37.037 0.00 0.00 43.97 1.85
397 398 8.382130 CGGATATAGTATCGACTGAGACTTAAC 58.618 40.741 0.00 0.00 43.97 2.01
398 399 8.382130 GGATATAGTATCGACTGAGACTTAACG 58.618 40.741 0.00 0.00 43.97 3.18
399 400 9.138062 GATATAGTATCGACTGAGACTTAACGA 57.862 37.037 0.00 0.00 43.97 3.85
400 401 7.783090 ATAGTATCGACTGAGACTTAACGAA 57.217 36.000 0.00 0.00 43.97 3.85
401 402 6.109320 AGTATCGACTGAGACTTAACGAAG 57.891 41.667 0.00 0.00 43.97 3.79
402 403 5.642919 AGTATCGACTGAGACTTAACGAAGT 59.357 40.000 0.00 0.00 43.97 3.01
403 404 6.183360 AGTATCGACTGAGACTTAACGAAGTC 60.183 42.308 9.35 9.35 43.97 3.01
412 413 4.144534 ACTTAACGAAGTCTCAGTCGAC 57.855 45.455 7.70 7.70 45.00 4.20
413 414 3.814283 ACTTAACGAAGTCTCAGTCGACT 59.186 43.478 13.58 13.58 45.00 4.18
414 415 4.993584 ACTTAACGAAGTCTCAGTCGACTA 59.006 41.667 19.57 0.00 45.00 2.59
415 416 5.468072 ACTTAACGAAGTCTCAGTCGACTAA 59.532 40.000 19.57 1.94 45.00 2.24
416 417 4.407496 AACGAAGTCTCAGTCGACTAAG 57.593 45.455 19.57 14.47 45.00 2.18
417 418 3.661944 ACGAAGTCTCAGTCGACTAAGA 58.338 45.455 19.57 17.01 43.14 2.10
418 419 3.680937 ACGAAGTCTCAGTCGACTAAGAG 59.319 47.826 19.02 20.32 43.14 2.85
419 420 3.680937 CGAAGTCTCAGTCGACTAAGAGT 59.319 47.826 19.02 18.89 43.14 3.24
420 421 4.152759 CGAAGTCTCAGTCGACTAAGAGTT 59.847 45.833 30.64 30.64 43.14 3.01
421 422 5.348179 CGAAGTCTCAGTCGACTAAGAGTTA 59.652 44.000 30.37 12.69 43.14 2.24
422 423 6.454583 CGAAGTCTCAGTCGACTAAGAGTTAG 60.455 46.154 30.37 26.90 43.14 2.34
423 424 4.632688 AGTCTCAGTCGACTAAGAGTTAGC 59.367 45.833 19.02 6.91 42.19 3.09
424 425 4.392445 GTCTCAGTCGACTAAGAGTTAGCA 59.608 45.833 19.02 3.28 36.71 3.49
425 426 5.001874 TCTCAGTCGACTAAGAGTTAGCAA 58.998 41.667 24.37 8.52 36.71 3.91
426 427 5.122554 TCTCAGTCGACTAAGAGTTAGCAAG 59.877 44.000 24.37 8.18 36.71 4.01
427 428 5.001874 TCAGTCGACTAAGAGTTAGCAAGA 58.998 41.667 19.57 3.42 36.71 3.02
428 429 5.472478 TCAGTCGACTAAGAGTTAGCAAGAA 59.528 40.000 19.57 0.00 36.71 2.52
429 430 5.797934 CAGTCGACTAAGAGTTAGCAAGAAG 59.202 44.000 19.57 0.00 36.71 2.85
430 431 5.474189 AGTCGACTAAGAGTTAGCAAGAAGT 59.526 40.000 18.46 0.00 36.71 3.01
431 432 5.796437 GTCGACTAAGAGTTAGCAAGAAGTC 59.204 44.000 8.70 0.00 36.71 3.01
432 433 5.706369 TCGACTAAGAGTTAGCAAGAAGTCT 59.294 40.000 0.00 0.00 40.18 3.24
433 434 6.025280 CGACTAAGAGTTAGCAAGAAGTCTC 58.975 44.000 4.43 0.00 38.00 3.36
434 435 5.945155 ACTAAGAGTTAGCAAGAAGTCTCG 58.055 41.667 4.43 2.93 38.00 4.04
435 436 3.859411 AGAGTTAGCAAGAAGTCTCGG 57.141 47.619 0.00 0.00 34.63 4.63
436 437 3.158676 AGAGTTAGCAAGAAGTCTCGGT 58.841 45.455 0.00 0.00 34.63 4.69
437 438 3.191791 AGAGTTAGCAAGAAGTCTCGGTC 59.808 47.826 0.00 0.00 34.63 4.79
438 439 2.095161 AGTTAGCAAGAAGTCTCGGTCG 60.095 50.000 0.00 0.00 0.00 4.79
439 440 1.817357 TAGCAAGAAGTCTCGGTCGA 58.183 50.000 0.00 0.00 0.00 4.20
440 441 0.241481 AGCAAGAAGTCTCGGTCGAC 59.759 55.000 7.13 7.13 0.00 4.20
441 442 0.241481 GCAAGAAGTCTCGGTCGACT 59.759 55.000 16.46 0.00 45.73 4.18
442 443 1.970447 CAAGAAGTCTCGGTCGACTG 58.030 55.000 18.66 18.66 43.14 3.51
443 444 1.535896 CAAGAAGTCTCGGTCGACTGA 59.464 52.381 25.02 25.02 43.14 3.41
451 452 1.085091 TCGGTCGACTGAGACTTAGC 58.915 55.000 23.11 0.00 40.76 3.09
452 453 0.803117 CGGTCGACTGAGACTTAGCA 59.197 55.000 20.01 0.00 40.76 3.49
453 454 1.199327 CGGTCGACTGAGACTTAGCAA 59.801 52.381 20.01 0.00 40.76 3.91
454 455 2.729467 CGGTCGACTGAGACTTAGCAAG 60.729 54.545 20.01 0.00 40.76 4.01
455 456 2.488545 GGTCGACTGAGACTTAGCAAGA 59.511 50.000 16.46 0.00 40.76 3.02
456 457 3.494232 GTCGACTGAGACTTAGCAAGAC 58.506 50.000 8.70 0.00 38.09 3.01
457 458 3.189702 GTCGACTGAGACTTAGCAAGACT 59.810 47.826 8.70 2.60 38.09 3.24
458 459 3.189495 TCGACTGAGACTTAGCAAGACTG 59.811 47.826 5.85 0.00 33.75 3.51
459 460 3.057876 CGACTGAGACTTAGCAAGACTGT 60.058 47.826 5.85 0.00 33.75 3.55
460 461 4.557695 CGACTGAGACTTAGCAAGACTGTT 60.558 45.833 5.85 0.00 33.75 3.16
461 462 4.626042 ACTGAGACTTAGCAAGACTGTTG 58.374 43.478 5.85 0.00 33.75 3.33
462 463 4.342378 ACTGAGACTTAGCAAGACTGTTGA 59.658 41.667 5.85 0.00 33.75 3.18
463 464 5.011533 ACTGAGACTTAGCAAGACTGTTGAT 59.988 40.000 5.85 0.00 33.75 2.57
464 465 6.209589 ACTGAGACTTAGCAAGACTGTTGATA 59.790 38.462 5.85 0.00 33.75 2.15
465 466 6.993079 TGAGACTTAGCAAGACTGTTGATAA 58.007 36.000 5.85 0.00 33.75 1.75
466 467 7.441836 TGAGACTTAGCAAGACTGTTGATAAA 58.558 34.615 5.85 0.00 33.75 1.40
467 468 7.931407 TGAGACTTAGCAAGACTGTTGATAAAA 59.069 33.333 5.85 0.00 33.75 1.52
468 469 8.854614 AGACTTAGCAAGACTGTTGATAAAAT 57.145 30.769 0.00 0.00 32.40 1.82
469 470 9.944376 AGACTTAGCAAGACTGTTGATAAAATA 57.056 29.630 0.00 0.00 32.40 1.40
474 475 8.693542 AGCAAGACTGTTGATAAAATAAATGC 57.306 30.769 0.00 0.00 0.00 3.56
475 476 8.306038 AGCAAGACTGTTGATAAAATAAATGCA 58.694 29.630 0.00 0.00 0.00 3.96
476 477 9.090692 GCAAGACTGTTGATAAAATAAATGCAT 57.909 29.630 0.00 0.00 0.00 3.96
478 479 8.638685 AGACTGTTGATAAAATAAATGCATGC 57.361 30.769 11.82 11.82 0.00 4.06
479 480 8.252417 AGACTGTTGATAAAATAAATGCATGCA 58.748 29.630 25.04 25.04 0.00 3.96
480 481 8.951787 ACTGTTGATAAAATAAATGCATGCAT 57.048 26.923 27.46 27.46 38.46 3.96
481 482 9.037737 ACTGTTGATAAAATAAATGCATGCATC 57.962 29.630 32.25 18.04 35.31 3.91
482 483 8.063339 TGTTGATAAAATAAATGCATGCATCG 57.937 30.769 32.25 0.00 35.31 3.84
483 484 6.693761 TGATAAAATAAATGCATGCATCGC 57.306 33.333 32.25 14.02 35.31 4.58
484 485 5.634439 TGATAAAATAAATGCATGCATCGCC 59.366 36.000 32.25 14.21 35.31 5.54
485 486 2.443887 AATAAATGCATGCATCGCCC 57.556 45.000 32.25 0.00 35.31 6.13
486 487 1.624336 ATAAATGCATGCATCGCCCT 58.376 45.000 32.25 14.70 35.31 5.19
487 488 0.953727 TAAATGCATGCATCGCCCTC 59.046 50.000 32.25 0.00 35.31 4.30
488 489 1.038681 AAATGCATGCATCGCCCTCA 61.039 50.000 32.25 1.85 35.31 3.86
489 490 0.826256 AATGCATGCATCGCCCTCAT 60.826 50.000 32.25 12.40 35.31 2.90
490 491 1.524008 ATGCATGCATCGCCCTCATG 61.524 55.000 27.46 0.00 40.23 3.07
491 492 2.191513 GCATGCATCGCCCTCATGT 61.192 57.895 14.21 0.00 39.64 3.21
492 493 0.886043 GCATGCATCGCCCTCATGTA 60.886 55.000 14.21 0.00 39.64 2.29
493 494 1.154197 CATGCATCGCCCTCATGTAG 58.846 55.000 0.00 0.00 34.48 2.74
494 495 1.051008 ATGCATCGCCCTCATGTAGA 58.949 50.000 0.00 0.00 0.00 2.59
495 496 0.829990 TGCATCGCCCTCATGTAGAA 59.170 50.000 0.00 0.00 0.00 2.10
496 497 1.202568 TGCATCGCCCTCATGTAGAAG 60.203 52.381 0.00 0.00 0.00 2.85
497 498 1.202580 GCATCGCCCTCATGTAGAAGT 60.203 52.381 0.00 0.00 0.00 3.01
498 499 2.748605 CATCGCCCTCATGTAGAAGTC 58.251 52.381 0.00 0.00 0.00 3.01
499 500 0.738975 TCGCCCTCATGTAGAAGTCG 59.261 55.000 0.00 0.00 0.00 4.18
500 501 0.456221 CGCCCTCATGTAGAAGTCGT 59.544 55.000 0.00 0.00 0.00 4.34
501 502 1.534175 CGCCCTCATGTAGAAGTCGTC 60.534 57.143 0.00 0.00 0.00 4.20
502 503 1.476891 GCCCTCATGTAGAAGTCGTCA 59.523 52.381 0.00 0.00 0.00 4.35
503 504 2.101582 GCCCTCATGTAGAAGTCGTCAT 59.898 50.000 0.00 0.00 0.00 3.06
504 505 3.797184 GCCCTCATGTAGAAGTCGTCATC 60.797 52.174 0.00 0.00 0.00 2.92
505 506 3.243569 CCCTCATGTAGAAGTCGTCATCC 60.244 52.174 0.00 0.00 0.00 3.51
506 507 3.634448 CCTCATGTAGAAGTCGTCATCCT 59.366 47.826 0.00 0.00 0.00 3.24
507 508 4.261405 CCTCATGTAGAAGTCGTCATCCTC 60.261 50.000 0.00 0.00 0.00 3.71
508 509 3.632604 TCATGTAGAAGTCGTCATCCTCC 59.367 47.826 0.00 0.00 0.00 4.30
509 510 3.367646 TGTAGAAGTCGTCATCCTCCT 57.632 47.619 0.00 0.00 0.00 3.69
510 511 3.698289 TGTAGAAGTCGTCATCCTCCTT 58.302 45.455 0.00 0.00 0.00 3.36
511 512 4.087182 TGTAGAAGTCGTCATCCTCCTTT 58.913 43.478 0.00 0.00 0.00 3.11
512 513 4.527038 TGTAGAAGTCGTCATCCTCCTTTT 59.473 41.667 0.00 0.00 0.00 2.27
513 514 4.195225 AGAAGTCGTCATCCTCCTTTTC 57.805 45.455 0.00 0.00 0.00 2.29
514 515 2.656560 AGTCGTCATCCTCCTTTTCG 57.343 50.000 0.00 0.00 0.00 3.46
515 516 2.168496 AGTCGTCATCCTCCTTTTCGA 58.832 47.619 0.00 0.00 0.00 3.71
516 517 2.094649 AGTCGTCATCCTCCTTTTCGAC 60.095 50.000 0.00 0.00 43.82 4.20
517 518 1.890489 TCGTCATCCTCCTTTTCGACA 59.110 47.619 0.00 0.00 0.00 4.35
518 519 2.297880 TCGTCATCCTCCTTTTCGACAA 59.702 45.455 0.00 0.00 0.00 3.18
519 520 3.064207 CGTCATCCTCCTTTTCGACAAA 58.936 45.455 0.00 0.00 0.00 2.83
520 521 3.496884 CGTCATCCTCCTTTTCGACAAAA 59.503 43.478 0.00 0.00 0.00 2.44
521 522 4.024387 CGTCATCCTCCTTTTCGACAAAAA 60.024 41.667 0.00 0.00 35.56 1.94
566 567 6.916360 AACATATCTTGCCTCAAAAGGAAA 57.084 33.333 0.00 0.00 46.67 3.13
574 575 6.976934 TTGCCTCAAAAGGAAAGACTTAAT 57.023 33.333 0.00 0.00 46.67 1.40
575 576 6.976934 TGCCTCAAAAGGAAAGACTTAATT 57.023 33.333 0.00 0.00 46.67 1.40
576 577 7.360113 TGCCTCAAAAGGAAAGACTTAATTT 57.640 32.000 0.00 0.00 46.67 1.82
577 578 8.472007 TGCCTCAAAAGGAAAGACTTAATTTA 57.528 30.769 0.00 0.00 46.67 1.40
578 579 8.919145 TGCCTCAAAAGGAAAGACTTAATTTAA 58.081 29.630 0.00 0.00 46.67 1.52
579 580 9.411801 GCCTCAAAAGGAAAGACTTAATTTAAG 57.588 33.333 13.44 13.44 46.67 1.85
580 581 9.914131 CCTCAAAAGGAAAGACTTAATTTAAGG 57.086 33.333 18.05 3.46 46.67 2.69
623 624 2.738521 CGGCGGTGTGGTTGAGAG 60.739 66.667 0.00 0.00 0.00 3.20
629 630 2.919971 GTGTGGTTGAGAGCTCACC 58.080 57.895 17.77 15.35 40.19 4.02
651 652 0.518355 CGGCGTACATTCAAAGTGCG 60.518 55.000 0.00 0.00 45.74 5.34
658 659 0.592637 CATTCAAAGTGCGACAGCCA 59.407 50.000 0.00 0.00 44.33 4.75
716 717 3.981071 ATTGTGGACGAGATTTCTCCA 57.019 42.857 2.08 1.80 39.79 3.86
725 726 3.131400 ACGAGATTTCTCCAGCCTACTTC 59.869 47.826 2.08 0.00 39.79 3.01
734 735 0.798776 CAGCCTACTTCCAAAGTGCG 59.201 55.000 2.65 0.00 42.84 5.34
736 737 0.796927 GCCTACTTCCAAAGTGCGAC 59.203 55.000 2.65 0.00 42.84 5.19
758 759 6.449830 ACTACCTACCAAAACCTGAAGATT 57.550 37.500 0.00 0.00 0.00 2.40
794 795 6.179040 GGATCCAATATCATCTCAGGGAAAG 58.821 44.000 6.95 0.00 0.00 2.62
795 796 6.013032 GGATCCAATATCATCTCAGGGAAAGA 60.013 42.308 6.95 0.00 0.00 2.52
812 813 9.228949 CAGGGAAAGAATAGAGATATCCATTTG 57.771 37.037 0.00 0.00 0.00 2.32
815 816 8.945057 GGAAAGAATAGAGATATCCATTTGCTC 58.055 37.037 0.00 0.00 0.00 4.26
817 818 9.504708 AAAGAATAGAGATATCCATTTGCTCAG 57.495 33.333 0.00 0.00 0.00 3.35
848 849 1.884579 ACAGGCAATGCAGAAGTGAAG 59.115 47.619 7.79 0.00 0.00 3.02
861 862 0.607489 AGTGAAGCATGCAGTGGACC 60.607 55.000 21.98 0.49 0.00 4.46
885 886 3.130869 CACTGCCAGGCAAGCAAATTATA 59.869 43.478 17.03 0.00 40.35 0.98
927 961 1.378762 GGCAAGTCCACCTAAGCCA 59.621 57.895 0.00 0.00 41.68 4.75
942 976 2.049888 AGCCAGCAAAGGAGATAAGC 57.950 50.000 0.00 0.00 0.00 3.09
960 997 7.182060 AGATAAGCCCCACAGAAATTAAGAAA 58.818 34.615 0.00 0.00 0.00 2.52
961 998 7.673926 AGATAAGCCCCACAGAAATTAAGAAAA 59.326 33.333 0.00 0.00 0.00 2.29
970 1007 5.971202 ACAGAAATTAAGAAAACAGCACACG 59.029 36.000 0.00 0.00 0.00 4.49
982 1027 2.045340 CACACGATTCCCACCCCC 60.045 66.667 0.00 0.00 0.00 5.40
1047 1092 0.673437 AAACGCCCAACCAATCACAG 59.327 50.000 0.00 0.00 0.00 3.66
1081 1132 3.178046 TCATCCTTGTAGCCAACCTGTA 58.822 45.455 0.00 0.00 0.00 2.74
1082 1133 3.197766 TCATCCTTGTAGCCAACCTGTAG 59.802 47.826 0.00 0.00 0.00 2.74
1084 1135 3.781808 TCCTTGTAGCCAACCTGTAGTA 58.218 45.455 0.00 0.00 0.00 1.82
1085 1136 3.767673 TCCTTGTAGCCAACCTGTAGTAG 59.232 47.826 0.00 0.00 0.00 2.57
1148 1201 2.430546 ACACGTGAAGCAAGAGAGAG 57.569 50.000 25.01 0.00 0.00 3.20
1220 1273 1.630148 CAAGTCGATGACCGGAGAAC 58.370 55.000 9.46 0.00 39.14 3.01
1254 1307 2.307098 AGGAGAGTTTCATGGGTGAAGG 59.693 50.000 0.00 0.00 44.62 3.46
1315 1368 0.920763 TGCATCCATGGGGGTCTTCT 60.921 55.000 13.02 0.00 38.11 2.85
1534 1594 0.179181 CTACAGCCGCATGTTGCAAG 60.179 55.000 0.00 0.00 45.36 4.01
1535 1595 2.198906 TACAGCCGCATGTTGCAAGC 62.199 55.000 0.00 0.00 45.36 4.01
1536 1596 3.296836 AGCCGCATGTTGCAAGCA 61.297 55.556 0.00 1.30 45.36 3.91
1537 1597 2.356075 GCCGCATGTTGCAAGCAA 60.356 55.556 0.00 2.89 45.36 3.91
1554 1616 1.270041 GCAAATTCGGGCCTTCAAACA 60.270 47.619 0.84 0.00 0.00 2.83
1612 1674 0.822121 GGGCGGGCCTCGAATTTTAT 60.822 55.000 14.22 0.00 42.43 1.40
1625 1687 6.757947 CCTCGAATTTTATCATTTGCAACCAT 59.242 34.615 0.00 0.00 0.00 3.55
1679 1741 1.000163 GGCCATACACGACGATCATCT 60.000 52.381 0.00 0.00 0.00 2.90
1715 1777 1.724582 GCTGGGCTGTCAAAACACGT 61.725 55.000 0.00 0.00 0.00 4.49
1807 1870 2.835764 ACCGGCTTAAATAGTCTGGTCA 59.164 45.455 0.00 0.00 35.85 4.02
1848 1911 6.441093 TCTGACATTATTGCATCCTTTGTC 57.559 37.500 9.21 9.21 34.16 3.18
1857 1920 5.381174 TTGCATCCTTTGTCAAGAAGATG 57.619 39.130 13.31 13.31 34.32 2.90
1920 1989 8.593945 AGATTCATAATCAGGTCTATCTCCTC 57.406 38.462 2.74 0.00 40.42 3.71
1939 2008 7.685481 TCTCCTCCACAAGTAAAACATTCATA 58.315 34.615 0.00 0.00 0.00 2.15
1980 2050 6.151985 TGAATTACAATGTCCCGCTACAATTT 59.848 34.615 0.00 0.00 32.02 1.82
2047 2137 9.249457 TCAATGTATATGAATGAGACGAACTTC 57.751 33.333 0.00 0.00 0.00 3.01
2065 2156 5.348418 ACTTCACACTTGATGAACAATCG 57.652 39.130 0.00 0.00 38.22 3.34
2095 2186 5.185442 TGATGAAATGCAATCTAGTGCCAAA 59.815 36.000 3.12 0.00 44.26 3.28
2223 2319 4.558496 CGGTGATGTGGCACTAAAATTTGT 60.558 41.667 19.83 0.00 38.78 2.83
2256 2352 1.781786 ATAGGAAGGAGCTTCTGCGA 58.218 50.000 0.00 0.00 45.42 5.10
2287 2388 0.330604 ACCGCTAGGACCTGTAGTGA 59.669 55.000 3.53 0.00 41.02 3.41
2298 2399 1.379443 TGTAGTGAGGTCGGCGGAT 60.379 57.895 7.21 0.00 0.00 4.18
2327 2439 3.565307 GGCACCCTCATATTTGGATTGA 58.435 45.455 0.00 0.00 0.00 2.57
2340 2452 6.600882 ATTTGGATTGAATATGAGGGATGC 57.399 37.500 0.00 0.00 0.00 3.91
2342 2454 3.398629 TGGATTGAATATGAGGGATGCCA 59.601 43.478 5.86 0.00 0.00 4.92
2345 2457 4.524802 TTGAATATGAGGGATGCCAGTT 57.475 40.909 5.86 0.00 0.00 3.16
2347 2459 5.645056 TGAATATGAGGGATGCCAGTTAA 57.355 39.130 5.86 0.00 0.00 2.01
2348 2460 5.376625 TGAATATGAGGGATGCCAGTTAAC 58.623 41.667 5.86 0.00 0.00 2.01
2351 2463 0.463833 GAGGGATGCCAGTTAACCCG 60.464 60.000 5.86 0.00 44.57 5.28
2362 2474 0.815095 GTTAACCCGGGCATTTGAGG 59.185 55.000 24.08 0.00 0.00 3.86
2376 2488 4.581824 GCATTTGAGGCTCTCCATATTCAA 59.418 41.667 16.72 0.00 33.74 2.69
2378 2490 4.842531 TTGAGGCTCTCCATATTCAACA 57.157 40.909 16.72 0.00 33.74 3.33
2380 2492 3.118261 TGAGGCTCTCCATATTCAACACC 60.118 47.826 16.72 0.00 33.74 4.16
2398 2510 0.588252 CCCGCAAGCATGTACATAGC 59.412 55.000 8.32 14.06 0.00 2.97
2399 2511 1.298602 CCGCAAGCATGTACATAGCA 58.701 50.000 23.27 0.00 0.00 3.49
2411 2523 3.136443 TGTACATAGCAAGCCAGCCTATT 59.864 43.478 0.00 0.00 34.23 1.73
2415 2527 2.058593 AGCAAGCCAGCCTATTAACC 57.941 50.000 0.00 0.00 34.23 2.85
2416 2528 1.032794 GCAAGCCAGCCTATTAACCC 58.967 55.000 0.00 0.00 0.00 4.11
2449 2561 7.619965 AGAGAAAGAGAAGAAAAAGGATCGAT 58.380 34.615 0.00 0.00 0.00 3.59
2453 2565 5.105752 AGAGAAGAAAAAGGATCGATCACG 58.894 41.667 25.93 0.00 41.26 4.35
2465 2577 1.660355 GATCACGCGAGCAGGGATA 59.340 57.895 15.93 0.00 36.53 2.59
2466 2578 0.244994 GATCACGCGAGCAGGGATAT 59.755 55.000 15.93 0.00 36.53 1.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 3.468140 GAGGTAGACCCCCGCCAC 61.468 72.222 0.00 0.00 36.42 5.01
15 16 3.674050 GAGAGGTAGACCCCCGCCA 62.674 68.421 0.00 0.00 36.42 5.69
16 17 2.838693 GAGAGGTAGACCCCCGCC 60.839 72.222 0.00 0.00 36.42 6.13
17 18 1.829096 GAGAGAGGTAGACCCCCGC 60.829 68.421 0.00 0.00 36.42 6.13
18 19 0.179012 GAGAGAGAGGTAGACCCCCG 60.179 65.000 0.00 0.00 36.42 5.73
19 20 0.179012 CGAGAGAGAGGTAGACCCCC 60.179 65.000 0.00 0.00 36.42 5.40
20 21 0.820482 GCGAGAGAGAGGTAGACCCC 60.820 65.000 0.00 0.00 36.42 4.95
21 22 1.161563 CGCGAGAGAGAGGTAGACCC 61.162 65.000 0.00 0.00 36.42 4.46
22 23 0.462403 ACGCGAGAGAGAGGTAGACC 60.462 60.000 15.93 0.00 33.96 3.85
23 24 0.932399 GACGCGAGAGAGAGGTAGAC 59.068 60.000 15.93 0.00 33.96 2.59
24 25 0.535797 TGACGCGAGAGAGAGGTAGA 59.464 55.000 15.93 0.00 33.96 2.59
25 26 1.262950 CATGACGCGAGAGAGAGGTAG 59.737 57.143 15.93 0.00 33.96 3.18
26 27 1.300481 CATGACGCGAGAGAGAGGTA 58.700 55.000 15.93 0.00 33.96 3.08
27 28 1.380403 CCATGACGCGAGAGAGAGGT 61.380 60.000 15.93 0.00 33.96 3.85
28 29 1.358402 CCATGACGCGAGAGAGAGG 59.642 63.158 15.93 0.73 33.96 3.69
29 30 1.098129 TCCCATGACGCGAGAGAGAG 61.098 60.000 15.93 0.00 33.96 3.20
30 31 1.077716 TCCCATGACGCGAGAGAGA 60.078 57.895 15.93 0.00 33.96 3.10
31 32 1.358402 CTCCCATGACGCGAGAGAG 59.642 63.158 15.93 6.03 0.00 3.20
32 33 1.378646 ACTCCCATGACGCGAGAGA 60.379 57.895 15.93 0.00 0.00 3.10
33 34 1.226802 CACTCCCATGACGCGAGAG 60.227 63.158 15.93 10.96 0.00 3.20
34 35 2.710902 CCACTCCCATGACGCGAGA 61.711 63.158 15.93 0.00 0.00 4.04
35 36 2.202797 CCACTCCCATGACGCGAG 60.203 66.667 15.93 0.00 0.00 5.03
36 37 2.994995 ACCACTCCCATGACGCGA 60.995 61.111 15.93 0.00 0.00 5.87
37 38 2.815211 CACCACTCCCATGACGCG 60.815 66.667 3.53 3.53 0.00 6.01
38 39 2.034879 CACACCACTCCCATGACGC 61.035 63.158 0.00 0.00 0.00 5.19
39 40 0.670546 GTCACACCACTCCCATGACG 60.671 60.000 0.00 0.00 31.19 4.35
40 41 0.321653 GGTCACACCACTCCCATGAC 60.322 60.000 0.00 0.00 38.42 3.06
41 42 1.488705 GGGTCACACCACTCCCATGA 61.489 60.000 0.00 0.00 41.02 3.07
42 43 1.002134 GGGTCACACCACTCCCATG 60.002 63.158 0.00 0.00 41.02 3.66
43 44 1.463214 TGGGTCACACCACTCCCAT 60.463 57.895 0.00 0.00 44.07 4.00
44 45 2.040359 TGGGTCACACCACTCCCA 60.040 61.111 0.00 0.00 46.34 4.37
45 46 1.841556 TCTGGGTCACACCACTCCC 60.842 63.158 0.00 0.00 41.02 4.30
46 47 1.371558 GTCTGGGTCACACCACTCC 59.628 63.158 0.00 0.00 41.02 3.85
47 48 1.371558 GGTCTGGGTCACACCACTC 59.628 63.158 0.00 0.00 41.02 3.51
48 49 2.147387 GGGTCTGGGTCACACCACT 61.147 63.158 0.00 0.00 41.02 4.00
49 50 2.430367 GGGTCTGGGTCACACCAC 59.570 66.667 0.00 0.00 41.02 4.16
50 51 3.238497 CGGGTCTGGGTCACACCA 61.238 66.667 0.00 0.00 41.02 4.17
51 52 4.016706 CCGGGTCTGGGTCACACC 62.017 72.222 0.00 0.00 37.60 4.16
52 53 4.699522 GCCGGGTCTGGGTCACAC 62.700 72.222 2.18 0.00 0.00 3.82
54 55 2.764637 AATTGCCGGGTCTGGGTCAC 62.765 60.000 2.18 0.00 0.00 3.67
55 56 2.478335 GAATTGCCGGGTCTGGGTCA 62.478 60.000 2.18 0.00 0.00 4.02
56 57 1.749258 GAATTGCCGGGTCTGGGTC 60.749 63.158 2.18 0.00 0.00 4.46
57 58 2.355115 GAATTGCCGGGTCTGGGT 59.645 61.111 2.18 0.00 0.00 4.51
58 59 2.824041 CGAATTGCCGGGTCTGGG 60.824 66.667 2.18 0.00 0.00 4.45
59 60 2.824041 CCGAATTGCCGGGTCTGG 60.824 66.667 2.18 0.00 45.43 3.86
66 67 1.444212 CAACCAAGCCGAATTGCCG 60.444 57.895 0.00 0.00 0.00 5.69
67 68 1.079888 CCAACCAAGCCGAATTGCC 60.080 57.895 0.00 0.00 0.00 4.52
68 69 1.079888 CCCAACCAAGCCGAATTGC 60.080 57.895 0.00 0.00 0.00 3.56
69 70 0.243636 GTCCCAACCAAGCCGAATTG 59.756 55.000 0.00 0.00 0.00 2.32
70 71 0.898326 GGTCCCAACCAAGCCGAATT 60.898 55.000 0.00 0.00 45.68 2.17
71 72 1.304134 GGTCCCAACCAAGCCGAAT 60.304 57.895 0.00 0.00 45.68 3.34
72 73 2.114411 GGTCCCAACCAAGCCGAA 59.886 61.111 0.00 0.00 45.68 4.30
89 90 1.401905 GCCCAACATCTAAAGCCGAAG 59.598 52.381 0.00 0.00 0.00 3.79
90 91 1.004277 AGCCCAACATCTAAAGCCGAA 59.996 47.619 0.00 0.00 0.00 4.30
91 92 0.618458 AGCCCAACATCTAAAGCCGA 59.382 50.000 0.00 0.00 0.00 5.54
92 93 1.463674 AAGCCCAACATCTAAAGCCG 58.536 50.000 0.00 0.00 0.00 5.52
93 94 2.094026 CCAAAGCCCAACATCTAAAGCC 60.094 50.000 0.00 0.00 0.00 4.35
94 95 2.562738 ACCAAAGCCCAACATCTAAAGC 59.437 45.455 0.00 0.00 0.00 3.51
95 96 3.573967 ACACCAAAGCCCAACATCTAAAG 59.426 43.478 0.00 0.00 0.00 1.85
96 97 3.320541 CACACCAAAGCCCAACATCTAAA 59.679 43.478 0.00 0.00 0.00 1.85
97 98 2.890311 CACACCAAAGCCCAACATCTAA 59.110 45.455 0.00 0.00 0.00 2.10
98 99 2.107378 TCACACCAAAGCCCAACATCTA 59.893 45.455 0.00 0.00 0.00 1.98
99 100 1.133513 TCACACCAAAGCCCAACATCT 60.134 47.619 0.00 0.00 0.00 2.90
100 101 1.270550 CTCACACCAAAGCCCAACATC 59.729 52.381 0.00 0.00 0.00 3.06
101 102 1.133513 TCTCACACCAAAGCCCAACAT 60.134 47.619 0.00 0.00 0.00 2.71
102 103 0.257328 TCTCACACCAAAGCCCAACA 59.743 50.000 0.00 0.00 0.00 3.33
103 104 1.620822 ATCTCACACCAAAGCCCAAC 58.379 50.000 0.00 0.00 0.00 3.77
104 105 2.364970 CAAATCTCACACCAAAGCCCAA 59.635 45.455 0.00 0.00 0.00 4.12
105 106 1.962807 CAAATCTCACACCAAAGCCCA 59.037 47.619 0.00 0.00 0.00 5.36
106 107 1.273327 CCAAATCTCACACCAAAGCCC 59.727 52.381 0.00 0.00 0.00 5.19
107 108 1.273327 CCCAAATCTCACACCAAAGCC 59.727 52.381 0.00 0.00 0.00 4.35
108 109 1.963515 ACCCAAATCTCACACCAAAGC 59.036 47.619 0.00 0.00 0.00 3.51
109 110 4.380867 GCATACCCAAATCTCACACCAAAG 60.381 45.833 0.00 0.00 0.00 2.77
110 111 3.509575 GCATACCCAAATCTCACACCAAA 59.490 43.478 0.00 0.00 0.00 3.28
111 112 3.088532 GCATACCCAAATCTCACACCAA 58.911 45.455 0.00 0.00 0.00 3.67
112 113 2.722094 GCATACCCAAATCTCACACCA 58.278 47.619 0.00 0.00 0.00 4.17
113 114 1.670811 CGCATACCCAAATCTCACACC 59.329 52.381 0.00 0.00 0.00 4.16
114 115 1.670811 CCGCATACCCAAATCTCACAC 59.329 52.381 0.00 0.00 0.00 3.82
115 116 2.016604 GCCGCATACCCAAATCTCACA 61.017 52.381 0.00 0.00 0.00 3.58
116 117 0.663153 GCCGCATACCCAAATCTCAC 59.337 55.000 0.00 0.00 0.00 3.51
117 118 0.465460 GGCCGCATACCCAAATCTCA 60.465 55.000 0.00 0.00 0.00 3.27
118 119 2.331265 GGCCGCATACCCAAATCTC 58.669 57.895 0.00 0.00 0.00 2.75
119 120 4.579127 GGCCGCATACCCAAATCT 57.421 55.556 0.00 0.00 0.00 2.40
126 127 3.767630 ATTGTCGGGGCCGCATACC 62.768 63.158 21.08 2.33 39.59 2.73
127 128 2.203153 ATTGTCGGGGCCGCATAC 60.203 61.111 21.08 16.89 39.59 2.39
128 129 2.110213 GATTGTCGGGGCCGCATA 59.890 61.111 21.08 3.97 39.59 3.14
129 130 3.797353 AGATTGTCGGGGCCGCAT 61.797 61.111 21.08 5.24 39.59 4.73
130 131 4.776322 CAGATTGTCGGGGCCGCA 62.776 66.667 21.08 4.16 39.59 5.69
132 133 4.776322 TGCAGATTGTCGGGGCCG 62.776 66.667 0.00 0.00 41.35 6.13
133 134 2.825836 CTGCAGATTGTCGGGGCC 60.826 66.667 8.42 0.00 0.00 5.80
134 135 3.512516 GCTGCAGATTGTCGGGGC 61.513 66.667 20.43 0.00 0.00 5.80
135 136 2.825836 GGCTGCAGATTGTCGGGG 60.826 66.667 20.43 0.00 0.00 5.73
136 137 2.825836 GGGCTGCAGATTGTCGGG 60.826 66.667 20.43 0.00 0.00 5.14
137 138 1.372087 GAAGGGCTGCAGATTGTCGG 61.372 60.000 20.43 0.00 0.00 4.79
138 139 0.674581 TGAAGGGCTGCAGATTGTCG 60.675 55.000 20.43 0.00 0.00 4.35
139 140 1.674962 GATGAAGGGCTGCAGATTGTC 59.325 52.381 20.43 9.34 0.00 3.18
140 141 1.760192 GATGAAGGGCTGCAGATTGT 58.240 50.000 20.43 0.00 0.00 2.71
141 142 0.661552 CGATGAAGGGCTGCAGATTG 59.338 55.000 20.43 0.32 0.00 2.67
142 143 0.543277 TCGATGAAGGGCTGCAGATT 59.457 50.000 20.43 8.53 0.00 2.40
143 144 0.106335 CTCGATGAAGGGCTGCAGAT 59.894 55.000 20.43 0.00 0.00 2.90
144 145 1.260538 ACTCGATGAAGGGCTGCAGA 61.261 55.000 20.43 0.00 0.00 4.26
145 146 0.392193 AACTCGATGAAGGGCTGCAG 60.392 55.000 10.11 10.11 0.00 4.41
146 147 0.674581 CAACTCGATGAAGGGCTGCA 60.675 55.000 0.50 0.00 0.00 4.41
147 148 0.391661 TCAACTCGATGAAGGGCTGC 60.392 55.000 0.00 0.00 0.00 5.25
148 149 2.322355 ATCAACTCGATGAAGGGCTG 57.678 50.000 0.00 0.00 31.20 4.85
149 150 2.366916 CCTATCAACTCGATGAAGGGCT 59.633 50.000 0.00 0.00 35.39 5.19
150 151 2.365617 TCCTATCAACTCGATGAAGGGC 59.634 50.000 12.97 0.00 35.39 5.19
151 152 3.639094 ACTCCTATCAACTCGATGAAGGG 59.361 47.826 12.97 9.31 35.39 3.95
152 153 4.927978 ACTCCTATCAACTCGATGAAGG 57.072 45.455 9.29 9.29 35.39 3.46
153 154 5.457140 GCTACTCCTATCAACTCGATGAAG 58.543 45.833 0.00 0.00 35.39 3.02
154 155 4.023963 CGCTACTCCTATCAACTCGATGAA 60.024 45.833 0.00 0.00 35.39 2.57
155 156 3.498777 CGCTACTCCTATCAACTCGATGA 59.501 47.826 0.00 0.00 35.39 2.92
156 157 3.498777 TCGCTACTCCTATCAACTCGATG 59.501 47.826 0.00 0.00 35.39 3.84
157 158 3.741249 TCGCTACTCCTATCAACTCGAT 58.259 45.455 0.00 0.00 38.21 3.59
158 159 3.189618 TCGCTACTCCTATCAACTCGA 57.810 47.619 0.00 0.00 0.00 4.04
159 160 4.691685 ACTATCGCTACTCCTATCAACTCG 59.308 45.833 0.00 0.00 0.00 4.18
160 161 6.016943 ACAACTATCGCTACTCCTATCAACTC 60.017 42.308 0.00 0.00 0.00 3.01
161 162 5.828859 ACAACTATCGCTACTCCTATCAACT 59.171 40.000 0.00 0.00 0.00 3.16
162 163 6.074544 ACAACTATCGCTACTCCTATCAAC 57.925 41.667 0.00 0.00 0.00 3.18
163 164 6.504398 CAACAACTATCGCTACTCCTATCAA 58.496 40.000 0.00 0.00 0.00 2.57
164 165 5.507482 GCAACAACTATCGCTACTCCTATCA 60.507 44.000 0.00 0.00 0.00 2.15
165 166 4.918583 GCAACAACTATCGCTACTCCTATC 59.081 45.833 0.00 0.00 0.00 2.08
166 167 4.585162 AGCAACAACTATCGCTACTCCTAT 59.415 41.667 0.00 0.00 31.60 2.57
167 168 3.952323 AGCAACAACTATCGCTACTCCTA 59.048 43.478 0.00 0.00 31.60 2.94
168 169 2.761208 AGCAACAACTATCGCTACTCCT 59.239 45.455 0.00 0.00 31.60 3.69
169 170 3.166489 AGCAACAACTATCGCTACTCC 57.834 47.619 0.00 0.00 31.60 3.85
170 171 5.579718 TCTTAGCAACAACTATCGCTACTC 58.420 41.667 0.00 0.00 36.73 2.59
171 172 5.578005 TCTTAGCAACAACTATCGCTACT 57.422 39.130 0.00 0.00 36.73 2.57
172 173 7.925703 TTATCTTAGCAACAACTATCGCTAC 57.074 36.000 0.00 0.00 36.73 3.58
173 174 9.841880 CTATTATCTTAGCAACAACTATCGCTA 57.158 33.333 0.00 0.00 35.93 4.26
174 175 7.329717 GCTATTATCTTAGCAACAACTATCGCT 59.670 37.037 0.00 0.00 43.33 4.93
175 176 7.329717 AGCTATTATCTTAGCAACAACTATCGC 59.670 37.037 6.28 0.00 45.72 4.58
176 177 8.749841 AGCTATTATCTTAGCAACAACTATCG 57.250 34.615 6.28 0.00 45.72 2.92
179 180 9.534565 CTGAAGCTATTATCTTAGCAACAACTA 57.465 33.333 6.28 0.00 45.72 2.24
180 181 8.260818 TCTGAAGCTATTATCTTAGCAACAACT 58.739 33.333 6.28 0.00 45.72 3.16
181 182 8.331742 GTCTGAAGCTATTATCTTAGCAACAAC 58.668 37.037 6.28 4.17 45.72 3.32
182 183 8.260818 AGTCTGAAGCTATTATCTTAGCAACAA 58.739 33.333 6.28 0.00 45.72 2.83
183 184 7.786030 AGTCTGAAGCTATTATCTTAGCAACA 58.214 34.615 6.28 4.88 45.72 3.33
184 185 8.655651 AAGTCTGAAGCTATTATCTTAGCAAC 57.344 34.615 6.28 1.01 45.72 4.17
213 214 8.960591 CACCAAGATCTTACAAAGGAATACATT 58.039 33.333 7.86 0.00 0.00 2.71
214 215 8.328758 TCACCAAGATCTTACAAAGGAATACAT 58.671 33.333 7.86 0.00 0.00 2.29
215 216 7.685481 TCACCAAGATCTTACAAAGGAATACA 58.315 34.615 7.86 0.00 0.00 2.29
216 217 8.451748 GTTCACCAAGATCTTACAAAGGAATAC 58.548 37.037 7.86 2.79 0.00 1.89
217 218 8.160765 TGTTCACCAAGATCTTACAAAGGAATA 58.839 33.333 7.86 2.93 0.00 1.75
218 219 7.004086 TGTTCACCAAGATCTTACAAAGGAAT 58.996 34.615 7.86 0.00 0.00 3.01
219 220 6.361433 TGTTCACCAAGATCTTACAAAGGAA 58.639 36.000 7.86 4.21 0.00 3.36
220 221 5.935945 TGTTCACCAAGATCTTACAAAGGA 58.064 37.500 7.86 0.00 0.00 3.36
221 222 6.633500 TTGTTCACCAAGATCTTACAAAGG 57.367 37.500 15.22 11.43 0.00 3.11
222 223 8.352201 TCAATTGTTCACCAAGATCTTACAAAG 58.648 33.333 19.45 15.79 36.25 2.77
223 224 8.231692 TCAATTGTTCACCAAGATCTTACAAA 57.768 30.769 19.45 6.04 36.25 2.83
224 225 7.815840 TCAATTGTTCACCAAGATCTTACAA 57.184 32.000 18.38 18.38 36.25 2.41
225 226 9.513906 TTATCAATTGTTCACCAAGATCTTACA 57.486 29.630 7.86 5.77 36.25 2.41
229 230 9.865321 CATTTTATCAATTGTTCACCAAGATCT 57.135 29.630 5.13 0.00 36.25 2.75
230 231 9.090692 CCATTTTATCAATTGTTCACCAAGATC 57.909 33.333 5.13 0.00 36.25 2.75
231 232 8.596293 ACCATTTTATCAATTGTTCACCAAGAT 58.404 29.630 5.13 0.00 36.25 2.40
232 233 7.871973 CACCATTTTATCAATTGTTCACCAAGA 59.128 33.333 5.13 0.00 36.25 3.02
233 234 7.656948 ACACCATTTTATCAATTGTTCACCAAG 59.343 33.333 5.13 0.00 36.25 3.61
234 235 7.440556 CACACCATTTTATCAATTGTTCACCAA 59.559 33.333 5.13 0.00 37.49 3.67
235 236 6.927936 CACACCATTTTATCAATTGTTCACCA 59.072 34.615 5.13 0.00 0.00 4.17
236 237 7.116233 GTCACACCATTTTATCAATTGTTCACC 59.884 37.037 5.13 0.00 0.00 4.02
237 238 7.867403 AGTCACACCATTTTATCAATTGTTCAC 59.133 33.333 5.13 0.00 0.00 3.18
238 239 7.950512 AGTCACACCATTTTATCAATTGTTCA 58.049 30.769 5.13 0.00 0.00 3.18
239 240 9.559958 CTAGTCACACCATTTTATCAATTGTTC 57.440 33.333 5.13 0.00 0.00 3.18
240 241 8.522830 CCTAGTCACACCATTTTATCAATTGTT 58.477 33.333 5.13 0.00 0.00 2.83
241 242 7.669722 ACCTAGTCACACCATTTTATCAATTGT 59.330 33.333 5.13 0.00 0.00 2.71
242 243 8.055279 ACCTAGTCACACCATTTTATCAATTG 57.945 34.615 0.00 0.00 0.00 2.32
243 244 8.109634 AGACCTAGTCACACCATTTTATCAATT 58.890 33.333 0.00 0.00 34.60 2.32
244 245 7.633789 AGACCTAGTCACACCATTTTATCAAT 58.366 34.615 0.00 0.00 34.60 2.57
245 246 7.016153 AGACCTAGTCACACCATTTTATCAA 57.984 36.000 0.00 0.00 34.60 2.57
246 247 6.212589 TGAGACCTAGTCACACCATTTTATCA 59.787 38.462 0.00 0.00 34.60 2.15
247 248 6.640518 TGAGACCTAGTCACACCATTTTATC 58.359 40.000 0.00 0.00 34.60 1.75
248 249 6.213600 ACTGAGACCTAGTCACACCATTTTAT 59.786 38.462 0.00 0.00 34.60 1.40
249 250 5.542635 ACTGAGACCTAGTCACACCATTTTA 59.457 40.000 0.00 0.00 34.60 1.52
250 251 4.348168 ACTGAGACCTAGTCACACCATTTT 59.652 41.667 0.00 0.00 34.60 1.82
251 252 3.904339 ACTGAGACCTAGTCACACCATTT 59.096 43.478 0.00 0.00 34.60 2.32
252 253 3.511477 ACTGAGACCTAGTCACACCATT 58.489 45.455 0.00 0.00 34.60 3.16
253 254 3.093057 GACTGAGACCTAGTCACACCAT 58.907 50.000 0.00 0.00 43.12 3.55
254 255 2.515854 GACTGAGACCTAGTCACACCA 58.484 52.381 0.00 0.00 43.12 4.17
255 256 1.469308 CGACTGAGACCTAGTCACACC 59.531 57.143 0.00 0.00 43.65 4.16
256 257 2.160022 GTCGACTGAGACCTAGTCACAC 59.840 54.545 8.70 0.00 43.65 3.82
257 258 2.038689 AGTCGACTGAGACCTAGTCACA 59.961 50.000 19.30 0.00 43.65 3.58
258 259 2.417239 CAGTCGACTGAGACCTAGTCAC 59.583 54.545 36.73 0.00 46.59 3.67
259 260 2.615747 CCAGTCGACTGAGACCTAGTCA 60.616 54.545 40.21 0.00 46.59 3.41
260 261 2.011222 CCAGTCGACTGAGACCTAGTC 58.989 57.143 40.21 0.00 46.59 2.59
261 262 1.340211 CCCAGTCGACTGAGACCTAGT 60.340 57.143 40.21 3.82 46.59 2.57
262 263 1.065345 TCCCAGTCGACTGAGACCTAG 60.065 57.143 40.21 23.78 46.59 3.02
263 264 0.989602 TCCCAGTCGACTGAGACCTA 59.010 55.000 40.21 18.86 46.59 3.08
264 265 0.333312 ATCCCAGTCGACTGAGACCT 59.667 55.000 40.21 20.42 46.59 3.85
265 266 1.187087 AATCCCAGTCGACTGAGACC 58.813 55.000 40.21 2.64 46.59 3.85
266 267 4.451629 TTAAATCCCAGTCGACTGAGAC 57.548 45.455 40.21 4.14 46.59 3.36
267 268 4.709886 TGATTAAATCCCAGTCGACTGAGA 59.290 41.667 40.21 34.61 46.59 3.27
268 269 5.011090 TGATTAAATCCCAGTCGACTGAG 57.989 43.478 40.21 30.85 46.59 3.35
269 270 5.414789 TTGATTAAATCCCAGTCGACTGA 57.585 39.130 40.21 25.41 46.59 3.41
270 271 6.683974 ATTTGATTAAATCCCAGTCGACTG 57.316 37.500 33.87 33.87 36.49 3.51
271 272 6.927294 GATTTGATTAAATCCCAGTCGACT 57.073 37.500 13.58 13.58 44.08 4.18
282 283 9.859427 TTTCGCTTGATTGAGATTTGATTAAAT 57.141 25.926 0.00 0.00 39.16 1.40
283 284 9.859427 ATTTCGCTTGATTGAGATTTGATTAAA 57.141 25.926 0.00 0.00 0.00 1.52
286 287 9.294030 GTTATTTCGCTTGATTGAGATTTGATT 57.706 29.630 0.00 0.00 0.00 2.57
287 288 8.461222 TGTTATTTCGCTTGATTGAGATTTGAT 58.539 29.630 0.00 0.00 0.00 2.57
288 289 7.815641 TGTTATTTCGCTTGATTGAGATTTGA 58.184 30.769 0.00 0.00 0.00 2.69
289 290 8.529102 CATGTTATTTCGCTTGATTGAGATTTG 58.471 33.333 0.00 0.00 0.00 2.32
290 291 7.221452 GCATGTTATTTCGCTTGATTGAGATTT 59.779 33.333 0.00 0.00 0.00 2.17
291 292 6.694411 GCATGTTATTTCGCTTGATTGAGATT 59.306 34.615 0.00 0.00 0.00 2.40
292 293 6.183360 TGCATGTTATTTCGCTTGATTGAGAT 60.183 34.615 0.00 0.00 0.00 2.75
293 294 5.123661 TGCATGTTATTTCGCTTGATTGAGA 59.876 36.000 0.00 0.00 0.00 3.27
294 295 5.334319 TGCATGTTATTTCGCTTGATTGAG 58.666 37.500 0.00 0.00 0.00 3.02
295 296 5.307926 TGCATGTTATTTCGCTTGATTGA 57.692 34.783 0.00 0.00 0.00 2.57
296 297 5.801444 TCTTGCATGTTATTTCGCTTGATTG 59.199 36.000 0.00 0.00 0.00 2.67
297 298 5.953183 TCTTGCATGTTATTTCGCTTGATT 58.047 33.333 0.00 0.00 0.00 2.57
298 299 5.565592 TCTTGCATGTTATTTCGCTTGAT 57.434 34.783 0.00 0.00 0.00 2.57
299 300 5.369685 TTCTTGCATGTTATTTCGCTTGA 57.630 34.783 0.00 0.00 0.00 3.02
300 301 5.858049 TCTTTCTTGCATGTTATTTCGCTTG 59.142 36.000 0.00 0.00 0.00 4.01
301 302 6.012658 TCTTTCTTGCATGTTATTTCGCTT 57.987 33.333 0.00 0.00 0.00 4.68
302 303 5.412594 TCTCTTTCTTGCATGTTATTTCGCT 59.587 36.000 0.00 0.00 0.00 4.93
303 304 5.631026 TCTCTTTCTTGCATGTTATTTCGC 58.369 37.500 0.00 0.00 0.00 4.70
304 305 8.506140 TTTTCTCTTTCTTGCATGTTATTTCG 57.494 30.769 0.00 0.00 0.00 3.46
305 306 9.683069 TCTTTTCTCTTTCTTGCATGTTATTTC 57.317 29.630 0.00 0.00 0.00 2.17
309 310 9.301153 GTTTTCTTTTCTCTTTCTTGCATGTTA 57.699 29.630 0.00 0.00 0.00 2.41
310 311 8.037166 AGTTTTCTTTTCTCTTTCTTGCATGTT 58.963 29.630 0.00 0.00 0.00 2.71
311 312 7.550712 AGTTTTCTTTTCTCTTTCTTGCATGT 58.449 30.769 0.00 0.00 0.00 3.21
312 313 7.998753 AGTTTTCTTTTCTCTTTCTTGCATG 57.001 32.000 0.00 0.00 0.00 4.06
314 315 9.921637 TTTTAGTTTTCTTTTCTCTTTCTTGCA 57.078 25.926 0.00 0.00 0.00 4.08
346 347 8.450964 CGTGAGATCTTACATTAAAATTGGTGT 58.549 33.333 16.95 0.00 0.00 4.16
347 348 7.910162 CCGTGAGATCTTACATTAAAATTGGTG 59.090 37.037 16.95 0.00 0.00 4.17
348 349 7.827236 TCCGTGAGATCTTACATTAAAATTGGT 59.173 33.333 16.95 0.00 0.00 3.67
349 350 8.208718 TCCGTGAGATCTTACATTAAAATTGG 57.791 34.615 16.95 7.15 0.00 3.16
358 359 9.047371 CGATACTATATCCGTGAGATCTTACAT 57.953 37.037 16.95 7.00 36.33 2.29
359 360 8.255905 TCGATACTATATCCGTGAGATCTTACA 58.744 37.037 16.95 0.00 36.33 2.41
360 361 8.542132 GTCGATACTATATCCGTGAGATCTTAC 58.458 40.741 7.56 7.56 36.33 2.34
361 362 8.476447 AGTCGATACTATATCCGTGAGATCTTA 58.524 37.037 0.00 0.00 33.25 2.10
362 363 7.279090 CAGTCGATACTATATCCGTGAGATCTT 59.721 40.741 0.00 0.00 33.53 2.40
363 364 6.759356 CAGTCGATACTATATCCGTGAGATCT 59.241 42.308 0.00 0.00 33.53 2.75
364 365 6.757478 TCAGTCGATACTATATCCGTGAGATC 59.243 42.308 0.00 0.00 33.53 2.75
365 366 6.641474 TCAGTCGATACTATATCCGTGAGAT 58.359 40.000 0.00 0.00 35.04 2.75
366 367 6.034161 TCAGTCGATACTATATCCGTGAGA 57.966 41.667 0.00 0.00 33.48 3.27
367 368 6.035220 GTCTCAGTCGATACTATATCCGTGAG 59.965 46.154 0.00 0.00 33.48 3.51
368 369 5.868258 GTCTCAGTCGATACTATATCCGTGA 59.132 44.000 0.00 0.00 33.48 4.35
369 370 5.870433 AGTCTCAGTCGATACTATATCCGTG 59.130 44.000 0.00 0.00 33.48 4.94
370 371 6.040209 AGTCTCAGTCGATACTATATCCGT 57.960 41.667 0.00 0.00 33.48 4.69
371 372 6.971527 AAGTCTCAGTCGATACTATATCCG 57.028 41.667 0.00 0.00 33.48 4.18
372 373 8.382130 CGTTAAGTCTCAGTCGATACTATATCC 58.618 40.741 0.00 0.00 33.48 2.59
373 374 9.138062 TCGTTAAGTCTCAGTCGATACTATATC 57.862 37.037 0.00 0.00 33.48 1.63
374 375 9.486497 TTCGTTAAGTCTCAGTCGATACTATAT 57.514 33.333 0.00 0.00 33.48 0.86
375 376 8.877808 TTCGTTAAGTCTCAGTCGATACTATA 57.122 34.615 0.00 0.00 33.48 1.31
376 377 7.495279 ACTTCGTTAAGTCTCAGTCGATACTAT 59.505 37.037 0.00 0.00 42.42 2.12
377 378 6.815641 ACTTCGTTAAGTCTCAGTCGATACTA 59.184 38.462 0.00 0.00 42.42 1.82
378 379 5.642919 ACTTCGTTAAGTCTCAGTCGATACT 59.357 40.000 0.00 0.00 42.42 2.12
379 380 5.867166 ACTTCGTTAAGTCTCAGTCGATAC 58.133 41.667 0.00 0.00 42.42 2.24
401 402 4.392445 TGCTAACTCTTAGTCGACTGAGAC 59.608 45.833 30.05 21.59 41.23 3.36
402 403 4.576879 TGCTAACTCTTAGTCGACTGAGA 58.423 43.478 31.03 31.03 36.42 3.27
403 404 4.948608 TGCTAACTCTTAGTCGACTGAG 57.051 45.455 26.80 26.80 35.66 3.35
404 405 5.001874 TCTTGCTAACTCTTAGTCGACTGA 58.998 41.667 28.12 19.13 35.66 3.41
405 406 5.298197 TCTTGCTAACTCTTAGTCGACTG 57.702 43.478 28.12 13.51 35.66 3.51
406 407 5.474189 ACTTCTTGCTAACTCTTAGTCGACT 59.526 40.000 23.66 23.66 35.66 4.18
407 408 5.701855 ACTTCTTGCTAACTCTTAGTCGAC 58.298 41.667 7.70 7.70 35.66 4.20
408 409 5.706369 AGACTTCTTGCTAACTCTTAGTCGA 59.294 40.000 0.00 0.00 36.71 4.20
409 410 5.945155 AGACTTCTTGCTAACTCTTAGTCG 58.055 41.667 0.00 0.00 36.71 4.18
410 411 6.025280 CGAGACTTCTTGCTAACTCTTAGTC 58.975 44.000 0.00 0.00 35.66 2.59
411 412 5.106078 CCGAGACTTCTTGCTAACTCTTAGT 60.106 44.000 0.00 0.00 35.66 2.24
412 413 5.106078 ACCGAGACTTCTTGCTAACTCTTAG 60.106 44.000 0.00 0.00 36.32 2.18
413 414 4.765856 ACCGAGACTTCTTGCTAACTCTTA 59.234 41.667 0.00 0.00 0.00 2.10
414 415 3.574826 ACCGAGACTTCTTGCTAACTCTT 59.425 43.478 0.00 0.00 0.00 2.85
415 416 3.158676 ACCGAGACTTCTTGCTAACTCT 58.841 45.455 0.00 0.00 0.00 3.24
416 417 3.503891 GACCGAGACTTCTTGCTAACTC 58.496 50.000 0.00 0.00 0.00 3.01
417 418 2.095161 CGACCGAGACTTCTTGCTAACT 60.095 50.000 0.00 0.00 0.00 2.24
418 419 2.095364 TCGACCGAGACTTCTTGCTAAC 60.095 50.000 0.00 0.00 0.00 2.34
419 420 2.095364 GTCGACCGAGACTTCTTGCTAA 60.095 50.000 3.51 0.00 38.09 3.09
420 421 1.467734 GTCGACCGAGACTTCTTGCTA 59.532 52.381 3.51 0.00 38.09 3.49
421 422 0.241481 GTCGACCGAGACTTCTTGCT 59.759 55.000 3.51 0.00 38.09 3.91
422 423 2.726887 GTCGACCGAGACTTCTTGC 58.273 57.895 3.51 0.00 38.09 4.01
430 431 2.619147 CTAAGTCTCAGTCGACCGAGA 58.381 52.381 24.28 24.28 35.93 4.04
431 432 1.062880 GCTAAGTCTCAGTCGACCGAG 59.937 57.143 20.59 20.59 34.46 4.63
432 433 1.085091 GCTAAGTCTCAGTCGACCGA 58.915 55.000 13.01 6.63 34.46 4.69
433 434 0.803117 TGCTAAGTCTCAGTCGACCG 59.197 55.000 13.01 1.05 34.46 4.79
434 435 2.488545 TCTTGCTAAGTCTCAGTCGACC 59.511 50.000 13.01 0.00 34.46 4.79
435 436 3.189702 AGTCTTGCTAAGTCTCAGTCGAC 59.810 47.826 7.70 7.70 0.00 4.20
436 437 3.189495 CAGTCTTGCTAAGTCTCAGTCGA 59.811 47.826 0.00 0.00 0.00 4.20
437 438 3.057876 ACAGTCTTGCTAAGTCTCAGTCG 60.058 47.826 0.00 0.00 0.00 4.18
438 439 4.513198 ACAGTCTTGCTAAGTCTCAGTC 57.487 45.455 0.00 0.00 0.00 3.51
439 440 4.342378 TCAACAGTCTTGCTAAGTCTCAGT 59.658 41.667 0.00 0.00 0.00 3.41
440 441 4.876125 TCAACAGTCTTGCTAAGTCTCAG 58.124 43.478 0.00 0.00 0.00 3.35
441 442 4.937201 TCAACAGTCTTGCTAAGTCTCA 57.063 40.909 0.00 0.00 0.00 3.27
442 443 7.891183 TTTATCAACAGTCTTGCTAAGTCTC 57.109 36.000 0.00 0.00 0.00 3.36
443 444 8.854614 ATTTTATCAACAGTCTTGCTAAGTCT 57.145 30.769 0.00 0.00 0.00 3.24
448 449 9.787532 GCATTTATTTTATCAACAGTCTTGCTA 57.212 29.630 0.00 0.00 0.00 3.49
449 450 8.306038 TGCATTTATTTTATCAACAGTCTTGCT 58.694 29.630 0.00 0.00 0.00 3.91
450 451 8.464770 TGCATTTATTTTATCAACAGTCTTGC 57.535 30.769 0.00 0.00 0.00 4.01
452 453 9.090692 GCATGCATTTATTTTATCAACAGTCTT 57.909 29.630 14.21 0.00 0.00 3.01
453 454 8.252417 TGCATGCATTTATTTTATCAACAGTCT 58.748 29.630 18.46 0.00 0.00 3.24
454 455 8.410030 TGCATGCATTTATTTTATCAACAGTC 57.590 30.769 18.46 0.00 0.00 3.51
455 456 8.951787 ATGCATGCATTTATTTTATCAACAGT 57.048 26.923 27.46 0.00 31.82 3.55
456 457 8.211838 CGATGCATGCATTTATTTTATCAACAG 58.788 33.333 32.60 8.98 36.70 3.16
457 458 7.306690 GCGATGCATGCATTTATTTTATCAACA 60.307 33.333 32.60 0.00 36.70 3.33
458 459 7.005380 GCGATGCATGCATTTATTTTATCAAC 58.995 34.615 32.60 14.65 36.70 3.18
459 460 6.145858 GGCGATGCATGCATTTATTTTATCAA 59.854 34.615 32.60 0.32 36.70 2.57
460 461 5.634439 GGCGATGCATGCATTTATTTTATCA 59.366 36.000 32.60 0.81 36.70 2.15
461 462 5.062558 GGGCGATGCATGCATTTATTTTATC 59.937 40.000 32.60 17.06 36.70 1.75
462 463 4.931002 GGGCGATGCATGCATTTATTTTAT 59.069 37.500 32.60 9.63 36.70 1.40
463 464 4.039004 AGGGCGATGCATGCATTTATTTTA 59.961 37.500 32.60 2.46 36.70 1.52
464 465 3.132925 GGGCGATGCATGCATTTATTTT 58.867 40.909 32.60 11.26 36.70 1.82
465 466 2.366266 AGGGCGATGCATGCATTTATTT 59.634 40.909 32.60 16.54 36.70 1.40
466 467 1.965643 AGGGCGATGCATGCATTTATT 59.034 42.857 32.60 12.89 36.70 1.40
467 468 1.542915 GAGGGCGATGCATGCATTTAT 59.457 47.619 32.60 17.54 36.70 1.40
468 469 0.953727 GAGGGCGATGCATGCATTTA 59.046 50.000 32.60 6.23 36.70 1.40
469 470 1.038681 TGAGGGCGATGCATGCATTT 61.039 50.000 32.60 14.56 36.70 2.32
470 471 0.826256 ATGAGGGCGATGCATGCATT 60.826 50.000 32.60 17.71 36.70 3.56
471 472 1.228459 ATGAGGGCGATGCATGCAT 60.228 52.632 32.66 32.66 39.69 3.96
472 473 2.190841 CATGAGGGCGATGCATGCA 61.191 57.895 25.04 25.04 33.81 3.96
473 474 0.886043 TACATGAGGGCGATGCATGC 60.886 55.000 11.82 11.82 42.28 4.06
474 475 1.154197 CTACATGAGGGCGATGCATG 58.846 55.000 2.46 0.00 43.70 4.06
475 476 1.051008 TCTACATGAGGGCGATGCAT 58.949 50.000 0.00 0.00 0.00 3.96
476 477 0.829990 TTCTACATGAGGGCGATGCA 59.170 50.000 0.00 0.00 0.00 3.96
477 478 1.202580 ACTTCTACATGAGGGCGATGC 60.203 52.381 0.00 0.00 0.00 3.91
478 479 2.748605 GACTTCTACATGAGGGCGATG 58.251 52.381 0.00 0.00 0.00 3.84
481 482 3.258225 CGACTTCTACATGAGGGCG 57.742 57.895 0.00 0.00 46.52 6.13
482 483 1.476891 TGACGACTTCTACATGAGGGC 59.523 52.381 0.00 0.00 0.00 5.19
483 484 3.243569 GGATGACGACTTCTACATGAGGG 60.244 52.174 0.00 0.00 0.00 4.30
484 485 3.634448 AGGATGACGACTTCTACATGAGG 59.366 47.826 0.00 0.00 0.00 3.86
485 486 4.261405 GGAGGATGACGACTTCTACATGAG 60.261 50.000 0.00 0.00 0.00 2.90
486 487 3.632604 GGAGGATGACGACTTCTACATGA 59.367 47.826 0.00 0.00 0.00 3.07
487 488 3.634448 AGGAGGATGACGACTTCTACATG 59.366 47.826 0.00 0.00 0.00 3.21
488 489 3.904717 AGGAGGATGACGACTTCTACAT 58.095 45.455 0.00 0.00 0.00 2.29
489 490 3.367646 AGGAGGATGACGACTTCTACA 57.632 47.619 0.00 0.00 0.00 2.74
490 491 4.722361 AAAGGAGGATGACGACTTCTAC 57.278 45.455 0.00 0.00 0.00 2.59
491 492 4.142447 CGAAAAGGAGGATGACGACTTCTA 60.142 45.833 0.00 0.00 0.00 2.10
492 493 3.367498 CGAAAAGGAGGATGACGACTTCT 60.367 47.826 0.00 0.00 0.00 2.85
493 494 2.924290 CGAAAAGGAGGATGACGACTTC 59.076 50.000 0.00 0.00 0.00 3.01
494 495 2.561419 TCGAAAAGGAGGATGACGACTT 59.439 45.455 0.00 0.00 0.00 3.01
495 496 2.094649 GTCGAAAAGGAGGATGACGACT 60.095 50.000 0.00 0.00 42.98 4.18
496 497 2.260481 GTCGAAAAGGAGGATGACGAC 58.740 52.381 0.00 0.00 40.77 4.34
497 498 1.890489 TGTCGAAAAGGAGGATGACGA 59.110 47.619 0.00 0.00 0.00 4.20
498 499 2.363788 TGTCGAAAAGGAGGATGACG 57.636 50.000 0.00 0.00 0.00 4.35
499 500 5.008712 AGTTTTTGTCGAAAAGGAGGATGAC 59.991 40.000 0.00 0.00 37.88 3.06
500 501 5.130350 AGTTTTTGTCGAAAAGGAGGATGA 58.870 37.500 0.00 0.00 37.88 2.92
501 502 5.438761 AGTTTTTGTCGAAAAGGAGGATG 57.561 39.130 0.00 0.00 37.88 3.51
502 503 7.761038 ATTAGTTTTTGTCGAAAAGGAGGAT 57.239 32.000 0.00 0.00 37.88 3.24
503 504 7.576861 AATTAGTTTTTGTCGAAAAGGAGGA 57.423 32.000 0.00 0.00 37.88 3.71
504 505 9.738832 TTTAATTAGTTTTTGTCGAAAAGGAGG 57.261 29.630 0.00 0.00 37.88 4.30
535 536 6.406692 TGAGGCAAGATATGTTACTCTACC 57.593 41.667 13.90 0.00 31.81 3.18
588 589 2.715046 CCGGAGTACACTACACCAGTA 58.285 52.381 0.00 0.00 39.08 2.74
589 590 1.542492 CCGGAGTACACTACACCAGT 58.458 55.000 0.00 0.00 39.08 4.00
590 591 0.172803 GCCGGAGTACACTACACCAG 59.827 60.000 5.05 0.00 39.08 4.00
591 592 1.588824 CGCCGGAGTACACTACACCA 61.589 60.000 5.05 0.00 39.08 4.17
592 593 1.138247 CGCCGGAGTACACTACACC 59.862 63.158 5.05 0.00 36.27 4.16
593 594 1.138247 CCGCCGGAGTACACTACAC 59.862 63.158 5.05 0.00 0.00 2.90
594 595 1.303561 ACCGCCGGAGTACACTACA 60.304 57.895 11.71 0.00 0.00 2.74
595 596 1.138247 CACCGCCGGAGTACACTAC 59.862 63.158 11.71 0.00 0.00 2.73
596 597 1.303561 ACACCGCCGGAGTACACTA 60.304 57.895 11.71 0.00 0.00 2.74
597 598 2.599578 ACACCGCCGGAGTACACT 60.600 61.111 11.71 0.00 0.00 3.55
598 599 2.431942 CACACCGCCGGAGTACAC 60.432 66.667 11.71 0.00 0.00 2.90
599 600 3.687102 CCACACCGCCGGAGTACA 61.687 66.667 11.71 0.00 0.00 2.90
600 601 3.230522 AACCACACCGCCGGAGTAC 62.231 63.158 11.71 0.00 0.00 2.73
629 630 1.060308 CTTTGAATGTACGCCGCCG 59.940 57.895 0.00 0.00 41.14 6.46
635 636 2.721797 GCTGTCGCACTTTGAATGTACG 60.722 50.000 0.00 0.00 35.78 3.67
651 652 5.382618 AACTTCAGATTTGATTGGCTGTC 57.617 39.130 0.00 0.00 32.27 3.51
716 717 0.685097 TCGCACTTTGGAAGTAGGCT 59.315 50.000 0.00 0.00 40.46 4.58
725 726 1.274167 TGGTAGGTAGTCGCACTTTGG 59.726 52.381 0.00 0.00 0.00 3.28
734 735 5.479124 TCTTCAGGTTTTGGTAGGTAGTC 57.521 43.478 0.00 0.00 0.00 2.59
736 737 7.761038 AAAATCTTCAGGTTTTGGTAGGTAG 57.239 36.000 0.00 0.00 0.00 3.18
794 795 9.153721 CTTCTGAGCAAATGGATATCTCTATTC 57.846 37.037 2.05 0.00 31.96 1.75
795 796 8.658619 ACTTCTGAGCAAATGGATATCTCTATT 58.341 33.333 2.05 0.00 34.35 1.73
804 805 6.151817 GTCCTTAAACTTCTGAGCAAATGGAT 59.848 38.462 0.00 0.00 0.00 3.41
812 813 2.744741 GCCTGTCCTTAAACTTCTGAGC 59.255 50.000 0.00 0.00 0.00 4.26
815 816 4.616835 GCATTGCCTGTCCTTAAACTTCTG 60.617 45.833 0.00 0.00 0.00 3.02
817 818 3.255642 TGCATTGCCTGTCCTTAAACTTC 59.744 43.478 6.12 0.00 0.00 3.01
885 886 6.769822 CCAATACTCCTAAAAGCATCATCAGT 59.230 38.462 0.00 0.00 0.00 3.41
927 961 1.064389 GTGGGGCTTATCTCCTTTGCT 60.064 52.381 0.00 0.00 0.00 3.91
942 976 5.221422 TGCTGTTTTCTTAATTTCTGTGGGG 60.221 40.000 0.00 0.00 0.00 4.96
960 997 0.889186 GGTGGGAATCGTGTGCTGTT 60.889 55.000 0.00 0.00 0.00 3.16
961 998 1.302511 GGTGGGAATCGTGTGCTGT 60.303 57.895 0.00 0.00 0.00 4.40
970 1007 2.290705 CGGTATTATGGGGGTGGGAATC 60.291 54.545 0.00 0.00 0.00 2.52
982 1027 0.033504 AGGCGCCAGACGGTATTATG 59.966 55.000 31.54 0.00 43.93 1.90
1047 1092 4.327680 ACAAGGATGAAGGCTTGAGTTAC 58.672 43.478 3.46 0.00 0.00 2.50
1081 1132 7.616150 ATGGAAGACATGTTGAGTAGTACTACT 59.384 37.037 31.10 31.10 42.75 2.57
1082 1133 7.154435 TGGAAGACATGTTGAGTAGTACTAC 57.846 40.000 23.03 23.03 36.35 2.73
1084 1135 6.859112 ATGGAAGACATGTTGAGTAGTACT 57.141 37.500 1.37 1.37 38.70 2.73
1148 1201 1.107114 TCGCTGATCCTCTTCCTCAC 58.893 55.000 0.00 0.00 0.00 3.51
1220 1273 3.959535 ACTCTCCTTCTGCTTCTCTTG 57.040 47.619 0.00 0.00 0.00 3.02
1254 1307 2.869101 ACAAGCTTCCTTCTTCTCCC 57.131 50.000 0.00 0.00 0.00 4.30
1473 1531 5.761003 TCATGACACACACAAGCTTTATTG 58.239 37.500 0.00 0.00 36.22 1.90
1534 1594 1.270041 TGTTTGAAGGCCCGAATTTGC 60.270 47.619 0.00 0.00 0.00 3.68
1535 1595 2.810439 TGTTTGAAGGCCCGAATTTG 57.190 45.000 0.00 0.00 0.00 2.32
1536 1596 2.233676 GGATGTTTGAAGGCCCGAATTT 59.766 45.455 0.00 0.00 0.00 1.82
1537 1597 1.824852 GGATGTTTGAAGGCCCGAATT 59.175 47.619 0.00 0.00 0.00 2.17
1679 1741 1.302993 GCCGGCCCAAGACTAACAA 60.303 57.895 18.11 0.00 0.00 2.83
1848 1911 8.954950 ATTTATACTCACAGTCCATCTTCTTG 57.045 34.615 0.00 0.00 0.00 3.02
1920 1989 9.988350 GTACTGATATGAATGTTTTACTTGTGG 57.012 33.333 0.00 0.00 0.00 4.17
2047 2137 4.730600 TGACGATTGTTCATCAAGTGTG 57.269 40.909 0.00 0.00 39.55 3.82
2065 2156 7.043590 GCACTAGATTGCATTTCATCAATTGAC 60.044 37.037 11.07 0.00 42.49 3.18
2095 2186 8.873830 CAATTCTTACTGTGTGAACGAGATAAT 58.126 33.333 0.00 0.00 0.00 1.28
2223 2319 3.006859 CCTTCCTATATCACCGATGCACA 59.993 47.826 0.00 0.00 0.00 4.57
2229 2325 3.527507 AGCTCCTTCCTATATCACCGA 57.472 47.619 0.00 0.00 0.00 4.69
2232 2328 4.565022 GCAGAAGCTCCTTCCTATATCAC 58.435 47.826 1.60 0.00 40.98 3.06
2323 2435 4.736611 ACTGGCATCCCTCATATTCAAT 57.263 40.909 0.00 0.00 0.00 2.57
2327 2439 4.447762 GGGTTAACTGGCATCCCTCATATT 60.448 45.833 5.42 0.00 35.63 1.28
2337 2449 2.044352 GCCCGGGTTAACTGGCAT 60.044 61.111 24.63 0.00 44.91 4.40
2340 2452 0.530288 CAAATGCCCGGGTTAACTGG 59.470 55.000 24.63 7.90 45.92 4.00
2342 2454 1.615919 CCTCAAATGCCCGGGTTAACT 60.616 52.381 24.63 0.00 0.00 2.24
2345 2457 1.379309 GCCTCAAATGCCCGGGTTA 60.379 57.895 24.63 12.65 0.00 2.85
2347 2459 3.645268 GAGCCTCAAATGCCCGGGT 62.645 63.158 24.63 0.00 0.00 5.28
2348 2460 2.830370 GAGCCTCAAATGCCCGGG 60.830 66.667 19.09 19.09 0.00 5.73
2351 2463 0.106318 ATGGAGAGCCTCAAATGCCC 60.106 55.000 0.00 0.00 34.31 5.36
2355 2467 5.591877 GTGTTGAATATGGAGAGCCTCAAAT 59.408 40.000 0.00 1.38 29.62 2.32
2362 2474 2.213499 CGGGTGTTGAATATGGAGAGC 58.787 52.381 0.00 0.00 0.00 4.09
2376 2488 0.322456 ATGTACATGCTTGCGGGTGT 60.322 50.000 7.78 4.21 0.00 4.16
2378 2490 1.953559 CTATGTACATGCTTGCGGGT 58.046 50.000 18.81 0.00 0.00 5.28
2380 2492 1.298602 TGCTATGTACATGCTTGCGG 58.701 50.000 18.81 1.56 0.00 5.69
2398 2510 2.092429 TGAGGGTTAATAGGCTGGCTTG 60.092 50.000 9.68 0.00 0.00 4.01
2399 2511 2.092375 GTGAGGGTTAATAGGCTGGCTT 60.092 50.000 9.68 0.00 0.00 4.35
2411 2523 5.394738 TCTCTTTCTCTCAAGTGAGGGTTA 58.605 41.667 8.04 0.00 43.12 2.85
2415 2527 5.720371 TCTTCTCTTTCTCTCAAGTGAGG 57.280 43.478 8.42 0.25 42.30 3.86
2416 2528 8.430801 TTTTTCTTCTCTTTCTCTCAAGTGAG 57.569 34.615 1.65 1.65 43.36 3.51
2449 2561 1.363807 CATATCCCTGCTCGCGTGA 59.636 57.895 13.13 0.00 0.00 4.35
2453 2565 2.919971 GGAACATATCCCTGCTCGC 58.080 57.895 0.00 0.00 43.00 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.