Multiple sequence alignment - TraesCS5A01G050900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G050900 chr5A 100.000 2249 0 0 1 2249 46274689 46276937 0.000000e+00 4154.0
1 TraesCS5A01G050900 chr5B 90.858 1411 69 22 1 1362 62977263 62978662 0.000000e+00 1836.0
2 TraesCS5A01G050900 chr5D 88.889 954 42 15 463 1373 58038561 58039493 0.000000e+00 1116.0
3 TraesCS5A01G050900 chr5D 88.141 312 30 6 1 308 58037651 58037959 4.560000e-97 364.0
4 TraesCS5A01G050900 chr5D 84.541 207 20 4 1404 1608 58057219 58057415 6.340000e-46 195.0
5 TraesCS5A01G050900 chr5D 82.212 208 22 7 1404 1608 58054721 58054916 4.970000e-37 165.0
6 TraesCS5A01G050900 chr5D 95.745 47 2 0 1643 1689 58039775 58039821 2.400000e-10 76.8
7 TraesCS5A01G050900 chr7A 94.465 271 14 1 1692 1962 715247954 715247685 1.240000e-112 416.0
8 TraesCS5A01G050900 chr7A 93.796 274 15 1 1690 1963 64169176 64168905 5.780000e-111 411.0
9 TraesCS5A01G050900 chr2B 94.403 268 15 0 1690 1957 135770455 135770188 1.610000e-111 412.0
10 TraesCS5A01G050900 chr2B 94.677 263 14 0 1692 1954 509155010 509155272 2.080000e-110 409.0
11 TraesCS5A01G050900 chr2B 93.773 273 16 1 1690 1961 666724538 666724810 2.080000e-110 409.0
12 TraesCS5A01G050900 chr7D 94.403 268 14 1 1692 1958 294050200 294049933 5.780000e-111 411.0
13 TraesCS5A01G050900 chr7D 84.956 226 30 3 2008 2229 398815820 398816045 2.250000e-55 226.0
14 TraesCS5A01G050900 chr1B 94.697 264 14 0 1692 1955 555256826 555256563 5.780000e-111 411.0
15 TraesCS5A01G050900 chr1D 93.680 269 17 0 1687 1955 194200501 194200769 9.670000e-109 403.0
16 TraesCS5A01G050900 chr3D 93.407 273 15 2 1690 1961 53837472 53837202 3.480000e-108 401.0
17 TraesCS5A01G050900 chr6D 88.496 226 24 2 2006 2229 463532609 463532834 2.850000e-69 272.0
18 TraesCS5A01G050900 chr3B 81.657 169 27 4 2062 2229 16256251 16256086 1.080000e-28 137.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G050900 chr5A 46274689 46276937 2248 False 4154.000000 4154 100.000 1 2249 1 chr5A.!!$F1 2248
1 TraesCS5A01G050900 chr5B 62977263 62978662 1399 False 1836.000000 1836 90.858 1 1362 1 chr5B.!!$F1 1361
2 TraesCS5A01G050900 chr5D 58037651 58039821 2170 False 518.933333 1116 90.925 1 1689 3 chr5D.!!$F1 1688

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
955 1446 1.659098 CACTCGCCGTTTGAATACTCC 59.341 52.381 0.0 0.0 0.0 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1974 2567 0.108992 GGGATGGCGCATGCAATATG 60.109 55.0 19.57 1.33 45.35 1.78 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
288 292 6.318144 TCAAACGGTGTTGGTTGATTTTACTA 59.682 34.615 0.00 0.00 0.00 1.82
363 623 7.947890 ACCAAATAAACAATGGAGGTAGAGAAA 59.052 33.333 0.00 0.00 37.66 2.52
388 648 6.536582 AGATTAATGGAGTGACAAATGACGAG 59.463 38.462 0.00 0.00 0.00 4.18
402 662 3.488778 TGACGAGATACTACTCCCTCC 57.511 52.381 0.00 0.00 33.83 4.30
408 668 2.987437 AGATACTACTCCCTCCGATCCA 59.013 50.000 0.00 0.00 0.00 3.41
409 669 3.398292 AGATACTACTCCCTCCGATCCAA 59.602 47.826 0.00 0.00 0.00 3.53
452 715 5.126396 AGCTCAAATTTGAACTAAGCCAC 57.874 39.130 19.96 3.85 36.64 5.01
460 723 2.479837 TGAACTAAGCCACGACACTTG 58.520 47.619 0.00 0.00 0.00 3.16
485 939 9.449719 TGTTTTTATCAGAGGGAGTAATTTCTC 57.550 33.333 3.60 3.60 0.00 2.87
490 944 2.696187 AGAGGGAGTAATTTCTCGAGGC 59.304 50.000 13.56 0.00 35.52 4.70
494 948 2.541556 GAGTAATTTCTCGAGGCGCTT 58.458 47.619 13.56 0.00 0.00 4.68
503 957 2.029290 TCTCGAGGCGCTTAAGACTTTT 60.029 45.455 13.56 0.00 0.00 2.27
504 958 2.737252 CTCGAGGCGCTTAAGACTTTTT 59.263 45.455 7.64 0.00 0.00 1.94
505 959 3.916761 TCGAGGCGCTTAAGACTTTTTA 58.083 40.909 7.64 0.00 0.00 1.52
506 960 4.501071 TCGAGGCGCTTAAGACTTTTTAT 58.499 39.130 7.64 0.00 0.00 1.40
507 961 5.653507 TCGAGGCGCTTAAGACTTTTTATA 58.346 37.500 7.64 0.00 0.00 0.98
508 962 6.278363 TCGAGGCGCTTAAGACTTTTTATAT 58.722 36.000 7.64 0.00 0.00 0.86
621 1075 1.858458 CAAGATACACCCGCGTACATG 59.142 52.381 4.92 0.00 0.00 3.21
729 1193 1.667236 TGAACAGTGGTTGCTCTGTG 58.333 50.000 0.00 0.00 42.95 3.66
915 1406 3.994392 CTCTATAAATAACGCCGCACCAT 59.006 43.478 0.00 0.00 0.00 3.55
955 1446 1.659098 CACTCGCCGTTTGAATACTCC 59.341 52.381 0.00 0.00 0.00 3.85
961 1452 1.927174 CCGTTTGAATACTCCGCTCTG 59.073 52.381 0.00 0.00 0.00 3.35
979 1470 2.015587 CTGCTCTCCTCCAGCAAAATC 58.984 52.381 0.00 0.00 46.22 2.17
1250 1767 1.678970 GCGCCCCCTCACTTTGATT 60.679 57.895 0.00 0.00 0.00 2.57
1251 1768 0.393808 GCGCCCCCTCACTTTGATTA 60.394 55.000 0.00 0.00 0.00 1.75
1252 1769 1.379527 CGCCCCCTCACTTTGATTAC 58.620 55.000 0.00 0.00 0.00 1.89
1253 1770 1.763968 GCCCCCTCACTTTGATTACC 58.236 55.000 0.00 0.00 0.00 2.85
1264 1783 4.827284 CACTTTGATTACCATCCATACCCC 59.173 45.833 0.00 0.00 0.00 4.95
1265 1784 4.480537 ACTTTGATTACCATCCATACCCCA 59.519 41.667 0.00 0.00 0.00 4.96
1311 1830 6.198591 ACGATCGCTAGCTTAAGTAATTGTTC 59.801 38.462 16.60 0.00 0.00 3.18
1331 1850 4.453177 TCTCTCAATTCTCTCTGTGCTG 57.547 45.455 0.00 0.00 0.00 4.41
1364 1883 8.818622 TTACTGTGTACTGTATCCAGATAACT 57.181 34.615 17.97 4.08 41.50 2.24
1365 1884 7.101652 ACTGTGTACTGTATCCAGATAACTG 57.898 40.000 17.97 0.00 41.50 3.16
1368 1887 6.661805 TGTGTACTGTATCCAGATAACTGTGA 59.338 38.462 0.00 0.00 41.50 3.58
1369 1888 7.342026 TGTGTACTGTATCCAGATAACTGTGAT 59.658 37.037 0.00 4.66 41.50 3.06
1389 1958 9.249457 CTGTGATGTGAATTATATGTACTCGTT 57.751 33.333 0.00 0.00 0.00 3.85
1390 1959 9.594478 TGTGATGTGAATTATATGTACTCGTTT 57.406 29.630 0.00 0.00 0.00 3.60
1391 1960 9.849607 GTGATGTGAATTATATGTACTCGTTTG 57.150 33.333 0.00 0.00 0.00 2.93
1392 1961 9.810545 TGATGTGAATTATATGTACTCGTTTGA 57.189 29.630 0.00 0.00 0.00 2.69
1397 1966 8.964150 TGAATTATATGTACTCGTTTGATCACG 58.036 33.333 0.00 0.00 41.78 4.35
1398 1967 7.869016 ATTATATGTACTCGTTTGATCACGG 57.131 36.000 0.00 0.00 40.74 4.94
1400 1969 3.211803 TGTACTCGTTTGATCACGGAG 57.788 47.619 12.82 12.82 40.74 4.63
1401 1970 2.815503 TGTACTCGTTTGATCACGGAGA 59.184 45.455 18.65 6.54 40.74 3.71
1402 1971 3.442625 TGTACTCGTTTGATCACGGAGAT 59.557 43.478 18.65 9.13 40.74 2.75
1403 1972 4.637091 TGTACTCGTTTGATCACGGAGATA 59.363 41.667 18.65 8.43 40.74 1.98
1404 1973 4.920640 ACTCGTTTGATCACGGAGATAT 57.079 40.909 18.65 0.31 40.74 1.63
1405 1974 6.484308 TGTACTCGTTTGATCACGGAGATATA 59.516 38.462 18.65 7.37 40.74 0.86
1406 1975 6.387041 ACTCGTTTGATCACGGAGATATAA 57.613 37.500 18.65 0.00 40.74 0.98
1407 1976 6.982852 ACTCGTTTGATCACGGAGATATAAT 58.017 36.000 18.65 0.00 40.74 1.28
1409 1978 8.237949 ACTCGTTTGATCACGGAGATATAATAG 58.762 37.037 18.65 4.00 40.74 1.73
1423 2016 6.613233 AGATATAATAGAGCCGTTGTTCTCG 58.387 40.000 0.00 0.00 33.67 4.04
1440 2033 2.561373 GCCGTGTGCTTAACAGCC 59.439 61.111 0.00 0.00 46.74 4.85
1448 2041 3.057806 GTGTGCTTAACAGCCGGTAAATT 60.058 43.478 1.90 0.00 46.74 1.82
1449 2042 3.570550 TGTGCTTAACAGCCGGTAAATTT 59.429 39.130 1.90 0.00 46.74 1.82
1450 2043 4.760715 TGTGCTTAACAGCCGGTAAATTTA 59.239 37.500 1.90 0.00 46.74 1.40
1451 2044 5.416326 TGTGCTTAACAGCCGGTAAATTTAT 59.584 36.000 1.90 0.00 46.74 1.40
1452 2045 6.598457 TGTGCTTAACAGCCGGTAAATTTATA 59.402 34.615 1.90 0.00 46.74 0.98
1453 2046 7.283580 TGTGCTTAACAGCCGGTAAATTTATAT 59.716 33.333 1.90 0.00 46.74 0.86
1454 2047 8.776470 GTGCTTAACAGCCGGTAAATTTATATA 58.224 33.333 1.90 0.00 46.74 0.86
1455 2048 9.509956 TGCTTAACAGCCGGTAAATTTATATAT 57.490 29.630 1.90 0.00 46.74 0.86
1463 2056 8.999431 AGCCGGTAAATTTATATATGTGTTGAG 58.001 33.333 1.90 0.00 0.00 3.02
1480 2073 5.928839 GTGTTGAGTATGTTCAGTGATCACT 59.071 40.000 22.89 22.89 43.61 3.41
1510 2103 6.757897 TGCTGGTAAGTAATGGAGAATTTG 57.242 37.500 0.00 0.00 0.00 2.32
1521 2114 4.174704 TGGAGAATTTGGGGATGATCAG 57.825 45.455 0.09 0.00 0.00 2.90
1522 2115 2.889678 GGAGAATTTGGGGATGATCAGC 59.110 50.000 1.26 1.26 0.00 4.26
1523 2116 3.436180 GGAGAATTTGGGGATGATCAGCT 60.436 47.826 11.34 0.00 0.00 4.24
1524 2117 4.213513 GAGAATTTGGGGATGATCAGCTT 58.786 43.478 11.34 0.00 0.00 3.74
1525 2118 5.380043 GAGAATTTGGGGATGATCAGCTTA 58.620 41.667 11.34 0.00 0.00 3.09
1526 2119 5.961897 AGAATTTGGGGATGATCAGCTTAT 58.038 37.500 11.34 0.00 0.00 1.73
1527 2120 6.379579 AGAATTTGGGGATGATCAGCTTATT 58.620 36.000 11.34 4.01 0.00 1.40
1528 2121 6.492772 AGAATTTGGGGATGATCAGCTTATTC 59.507 38.462 11.34 11.77 0.00 1.75
1529 2122 3.407424 TGGGGATGATCAGCTTATTCG 57.593 47.619 11.34 0.00 0.00 3.34
1530 2123 2.079925 GGGGATGATCAGCTTATTCGC 58.920 52.381 11.34 5.64 0.00 4.70
1531 2124 2.289945 GGGGATGATCAGCTTATTCGCT 60.290 50.000 11.34 0.00 41.90 4.93
1532 2125 3.406764 GGGATGATCAGCTTATTCGCTT 58.593 45.455 11.34 0.00 38.41 4.68
1533 2126 3.817647 GGGATGATCAGCTTATTCGCTTT 59.182 43.478 11.34 0.00 38.41 3.51
1534 2127 4.276926 GGGATGATCAGCTTATTCGCTTTT 59.723 41.667 11.34 0.00 38.41 2.27
1535 2128 5.221126 GGGATGATCAGCTTATTCGCTTTTT 60.221 40.000 11.34 0.00 38.41 1.94
1536 2129 5.684626 GGATGATCAGCTTATTCGCTTTTTG 59.315 40.000 11.34 0.00 38.41 2.44
1537 2130 4.414852 TGATCAGCTTATTCGCTTTTTGC 58.585 39.130 0.00 0.00 38.41 3.68
1538 2131 3.913548 TCAGCTTATTCGCTTTTTGCA 57.086 38.095 0.00 0.00 43.06 4.08
1539 2132 4.439305 TCAGCTTATTCGCTTTTTGCAT 57.561 36.364 0.00 0.00 43.06 3.96
1540 2133 5.559427 TCAGCTTATTCGCTTTTTGCATA 57.441 34.783 0.00 0.00 43.06 3.14
1541 2134 5.948588 TCAGCTTATTCGCTTTTTGCATAA 58.051 33.333 0.00 0.00 43.06 1.90
1542 2135 6.385843 TCAGCTTATTCGCTTTTTGCATAAA 58.614 32.000 2.28 2.28 43.06 1.40
1543 2136 6.865726 TCAGCTTATTCGCTTTTTGCATAAAA 59.134 30.769 3.89 5.46 43.06 1.52
1544 2137 7.062138 TCAGCTTATTCGCTTTTTGCATAAAAG 59.938 33.333 20.48 20.48 43.06 2.27
1545 2138 6.311200 AGCTTATTCGCTTTTTGCATAAAAGG 59.689 34.615 23.42 17.26 43.06 3.11
1549 2142 2.083774 GCTTTTTGCATAAAAGGCCCC 58.916 47.619 23.42 11.52 46.89 5.80
1608 2201 8.685427 TGCGTATACAACTAGTACCAAATCTAA 58.315 33.333 3.32 0.00 35.05 2.10
1609 2202 8.962111 GCGTATACAACTAGTACCAAATCTAAC 58.038 37.037 3.32 0.00 35.05 2.34
1615 2208 7.606456 ACAACTAGTACCAAATCTAACATGTGG 59.394 37.037 0.00 0.00 35.39 4.17
1616 2209 6.113411 ACTAGTACCAAATCTAACATGTGGC 58.887 40.000 0.00 0.00 32.27 5.01
1617 2210 4.917385 AGTACCAAATCTAACATGTGGCA 58.083 39.130 0.00 0.00 32.27 4.92
1618 2211 4.943705 AGTACCAAATCTAACATGTGGCAG 59.056 41.667 0.00 0.00 32.27 4.85
1619 2212 2.493278 ACCAAATCTAACATGTGGCAGC 59.507 45.455 0.00 0.00 32.27 5.25
1620 2213 2.492881 CCAAATCTAACATGTGGCAGCA 59.507 45.455 0.00 0.00 0.00 4.41
1621 2214 3.056678 CCAAATCTAACATGTGGCAGCAA 60.057 43.478 0.00 0.00 0.00 3.91
1622 2215 4.171005 CAAATCTAACATGTGGCAGCAAG 58.829 43.478 0.00 0.00 0.00 4.01
1623 2216 1.167851 TCTAACATGTGGCAGCAAGC 58.832 50.000 0.00 0.00 44.65 4.01
1632 2225 2.341176 GCAGCAAGCCAACCAAGG 59.659 61.111 0.00 0.00 37.23 3.61
1633 2226 3.053828 CAGCAAGCCAACCAAGGG 58.946 61.111 0.00 0.00 0.00 3.95
1634 2227 1.531365 CAGCAAGCCAACCAAGGGA 60.531 57.895 0.00 0.00 0.00 4.20
1635 2228 1.531602 AGCAAGCCAACCAAGGGAC 60.532 57.895 0.00 0.00 0.00 4.46
1636 2229 1.832167 GCAAGCCAACCAAGGGACA 60.832 57.895 0.00 0.00 0.00 4.02
1637 2230 1.187567 GCAAGCCAACCAAGGGACAT 61.188 55.000 0.00 0.00 0.00 3.06
1638 2231 0.604578 CAAGCCAACCAAGGGACATG 59.395 55.000 0.00 0.00 0.00 3.21
1639 2232 1.187567 AAGCCAACCAAGGGACATGC 61.188 55.000 0.00 0.00 0.00 4.06
1640 2233 2.649129 GCCAACCAAGGGACATGCC 61.649 63.158 0.00 0.00 0.00 4.40
1641 2234 1.228831 CCAACCAAGGGACATGCCA 60.229 57.895 8.20 0.00 38.95 4.92
1642 2235 1.535204 CCAACCAAGGGACATGCCAC 61.535 60.000 8.20 0.00 38.95 5.01
1643 2236 1.228862 AACCAAGGGACATGCCACC 60.229 57.895 8.20 1.19 38.95 4.61
1644 2237 2.017668 AACCAAGGGACATGCCACCA 62.018 55.000 8.20 0.00 38.95 4.17
1645 2238 1.978617 CCAAGGGACATGCCACCAC 60.979 63.158 8.20 0.00 38.95 4.16
1646 2239 1.228521 CAAGGGACATGCCACCACA 60.229 57.895 8.20 0.00 38.95 4.17
1647 2240 0.612732 CAAGGGACATGCCACCACAT 60.613 55.000 8.20 0.00 38.95 3.21
1689 2282 0.099791 CAACGGTTTTCACAAGGCGT 59.900 50.000 0.00 0.00 0.00 5.68
1690 2283 1.331138 CAACGGTTTTCACAAGGCGTA 59.669 47.619 0.00 0.00 0.00 4.42
1691 2284 1.666054 ACGGTTTTCACAAGGCGTAA 58.334 45.000 0.00 0.00 0.00 3.18
1692 2285 1.600485 ACGGTTTTCACAAGGCGTAAG 59.400 47.619 0.00 0.00 43.44 2.34
1693 2286 1.069500 CGGTTTTCACAAGGCGTAAGG 60.069 52.381 0.00 0.00 38.28 2.69
1705 2298 1.571919 GCGTAAGGCTGGTCATAGTG 58.428 55.000 0.00 0.00 39.11 2.74
1706 2299 1.806623 GCGTAAGGCTGGTCATAGTGG 60.807 57.143 0.00 0.00 39.11 4.00
1707 2300 1.202533 CGTAAGGCTGGTCATAGTGGG 60.203 57.143 0.00 0.00 0.00 4.61
1708 2301 1.141053 GTAAGGCTGGTCATAGTGGGG 59.859 57.143 0.00 0.00 0.00 4.96
1709 2302 0.253160 AAGGCTGGTCATAGTGGGGA 60.253 55.000 0.00 0.00 0.00 4.81
1710 2303 0.692419 AGGCTGGTCATAGTGGGGAG 60.692 60.000 0.00 0.00 0.00 4.30
1711 2304 0.983378 GGCTGGTCATAGTGGGGAGT 60.983 60.000 0.00 0.00 0.00 3.85
1712 2305 1.691482 GGCTGGTCATAGTGGGGAGTA 60.691 57.143 0.00 0.00 0.00 2.59
1713 2306 2.116238 GCTGGTCATAGTGGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
1714 2307 2.158943 GCTGGTCATAGTGGGGAGTAAC 60.159 54.545 0.00 0.00 0.00 2.50
1715 2308 3.375699 CTGGTCATAGTGGGGAGTAACT 58.624 50.000 0.00 0.00 0.00 2.24
1716 2309 3.775316 CTGGTCATAGTGGGGAGTAACTT 59.225 47.826 0.00 0.00 0.00 2.66
1717 2310 4.950361 TGGTCATAGTGGGGAGTAACTTA 58.050 43.478 0.00 0.00 0.00 2.24
1718 2311 4.960469 TGGTCATAGTGGGGAGTAACTTAG 59.040 45.833 0.00 0.00 0.00 2.18
1719 2312 5.206587 GGTCATAGTGGGGAGTAACTTAGA 58.793 45.833 0.00 0.00 0.00 2.10
1720 2313 5.068855 GGTCATAGTGGGGAGTAACTTAGAC 59.931 48.000 0.00 0.00 32.58 2.59
1721 2314 5.892686 GTCATAGTGGGGAGTAACTTAGACT 59.107 44.000 0.00 0.00 31.58 3.24
1722 2315 7.059156 GTCATAGTGGGGAGTAACTTAGACTA 58.941 42.308 0.00 0.00 31.58 2.59
1723 2316 7.229106 GTCATAGTGGGGAGTAACTTAGACTAG 59.771 44.444 0.00 0.00 31.58 2.57
1724 2317 5.533333 AGTGGGGAGTAACTTAGACTAGT 57.467 43.478 0.00 0.00 0.00 2.57
1725 2318 5.262804 AGTGGGGAGTAACTTAGACTAGTG 58.737 45.833 0.00 0.00 0.00 2.74
1726 2319 5.015515 GTGGGGAGTAACTTAGACTAGTGT 58.984 45.833 0.00 0.00 0.00 3.55
1727 2320 5.125257 GTGGGGAGTAACTTAGACTAGTGTC 59.875 48.000 0.00 0.00 43.22 3.67
1728 2321 5.222192 TGGGGAGTAACTTAGACTAGTGTCA 60.222 44.000 0.00 0.00 45.20 3.58
1729 2322 5.892686 GGGGAGTAACTTAGACTAGTGTCAT 59.107 44.000 0.00 0.00 45.20 3.06
1730 2323 7.059156 GGGGAGTAACTTAGACTAGTGTCATA 58.941 42.308 0.00 0.00 45.20 2.15
1731 2324 7.724951 GGGGAGTAACTTAGACTAGTGTCATAT 59.275 40.741 0.00 0.00 45.20 1.78
1732 2325 8.569641 GGGAGTAACTTAGACTAGTGTCATATG 58.430 40.741 0.00 0.00 45.20 1.78
1733 2326 8.077386 GGAGTAACTTAGACTAGTGTCATATGC 58.923 40.741 0.00 0.00 45.20 3.14
1734 2327 8.521170 AGTAACTTAGACTAGTGTCATATGCA 57.479 34.615 0.00 0.00 45.20 3.96
1735 2328 9.137459 AGTAACTTAGACTAGTGTCATATGCAT 57.863 33.333 3.79 3.79 45.20 3.96
1738 2331 9.751542 AACTTAGACTAGTGTCATATGCATAAC 57.248 33.333 11.13 6.04 45.20 1.89
1739 2332 8.914011 ACTTAGACTAGTGTCATATGCATAACA 58.086 33.333 11.13 8.81 45.20 2.41
1740 2333 9.186323 CTTAGACTAGTGTCATATGCATAACAC 57.814 37.037 24.73 24.73 45.20 3.32
1749 2342 9.186323 GTGTCATATGCATAACACTAGTCTAAG 57.814 37.037 24.79 0.00 39.09 2.18
1750 2343 8.914011 TGTCATATGCATAACACTAGTCTAAGT 58.086 33.333 11.13 0.00 0.00 2.24
1751 2344 9.751542 GTCATATGCATAACACTAGTCTAAGTT 57.248 33.333 11.13 0.00 0.00 2.66
1791 2384 9.938280 TGCAAAGTAACATAATAGTAGTGTCTT 57.062 29.630 0.00 0.00 0.00 3.01
1799 2392 8.713708 ACATAATAGTAGTGTCTTAGATGGCT 57.286 34.615 0.00 0.00 0.00 4.75
1800 2393 9.148879 ACATAATAGTAGTGTCTTAGATGGCTT 57.851 33.333 0.00 0.00 0.00 4.35
1801 2394 9.632807 CATAATAGTAGTGTCTTAGATGGCTTC 57.367 37.037 0.00 0.00 0.00 3.86
1802 2395 7.661536 AATAGTAGTGTCTTAGATGGCTTCA 57.338 36.000 3.03 0.00 0.00 3.02
1803 2396 7.847711 ATAGTAGTGTCTTAGATGGCTTCAT 57.152 36.000 3.03 0.00 0.00 2.57
1804 2397 6.552445 AGTAGTGTCTTAGATGGCTTCATT 57.448 37.500 3.03 0.00 0.00 2.57
1805 2398 6.951971 AGTAGTGTCTTAGATGGCTTCATTT 58.048 36.000 3.03 0.00 0.00 2.32
1806 2399 8.079211 AGTAGTGTCTTAGATGGCTTCATTTA 57.921 34.615 3.03 0.00 0.00 1.40
1807 2400 8.709308 AGTAGTGTCTTAGATGGCTTCATTTAT 58.291 33.333 3.03 0.00 0.00 1.40
1808 2401 9.331282 GTAGTGTCTTAGATGGCTTCATTTATT 57.669 33.333 3.03 0.00 0.00 1.40
1810 2403 9.553064 AGTGTCTTAGATGGCTTCATTTATTAG 57.447 33.333 3.03 0.00 0.00 1.73
1811 2404 8.286097 GTGTCTTAGATGGCTTCATTTATTAGC 58.714 37.037 3.03 0.00 0.00 3.09
1812 2405 8.213679 TGTCTTAGATGGCTTCATTTATTAGCT 58.786 33.333 3.03 0.00 35.30 3.32
1813 2406 9.061435 GTCTTAGATGGCTTCATTTATTAGCTT 57.939 33.333 0.00 0.00 35.30 3.74
1814 2407 9.060347 TCTTAGATGGCTTCATTTATTAGCTTG 57.940 33.333 0.00 0.00 35.30 4.01
1815 2408 8.752005 TTAGATGGCTTCATTTATTAGCTTGT 57.248 30.769 0.00 0.00 35.30 3.16
1816 2409 9.845740 TTAGATGGCTTCATTTATTAGCTTGTA 57.154 29.630 0.00 0.00 35.30 2.41
1817 2410 8.388484 AGATGGCTTCATTTATTAGCTTGTAG 57.612 34.615 0.00 0.00 35.30 2.74
1818 2411 8.213679 AGATGGCTTCATTTATTAGCTTGTAGA 58.786 33.333 0.00 0.00 35.30 2.59
1819 2412 7.553881 TGGCTTCATTTATTAGCTTGTAGAC 57.446 36.000 0.00 0.00 35.30 2.59
1820 2413 7.338710 TGGCTTCATTTATTAGCTTGTAGACT 58.661 34.615 0.00 0.00 35.30 3.24
1821 2414 7.829211 TGGCTTCATTTATTAGCTTGTAGACTT 59.171 33.333 0.00 0.00 35.30 3.01
1822 2415 9.326413 GGCTTCATTTATTAGCTTGTAGACTTA 57.674 33.333 0.00 0.00 35.30 2.24
1833 2426 7.440523 AGCTTGTAGACTTATTTTGTCTTGG 57.559 36.000 1.67 0.00 41.45 3.61
1834 2427 6.431234 AGCTTGTAGACTTATTTTGTCTTGGG 59.569 38.462 1.67 0.00 41.45 4.12
1835 2428 6.430000 GCTTGTAGACTTATTTTGTCTTGGGA 59.570 38.462 1.67 0.00 41.45 4.37
1836 2429 7.040686 GCTTGTAGACTTATTTTGTCTTGGGAA 60.041 37.037 1.67 0.00 41.45 3.97
1837 2430 7.979444 TGTAGACTTATTTTGTCTTGGGAAG 57.021 36.000 1.67 0.00 41.45 3.46
1838 2431 5.966742 AGACTTATTTTGTCTTGGGAAGC 57.033 39.130 0.00 0.00 41.45 3.86
1839 2432 4.455877 AGACTTATTTTGTCTTGGGAAGCG 59.544 41.667 0.00 0.00 41.45 4.68
1840 2433 3.057526 ACTTATTTTGTCTTGGGAAGCGC 60.058 43.478 0.00 0.00 0.00 5.92
1841 2434 1.620822 ATTTTGTCTTGGGAAGCGCT 58.379 45.000 2.64 2.64 0.00 5.92
1842 2435 2.264005 TTTTGTCTTGGGAAGCGCTA 57.736 45.000 12.05 0.00 0.00 4.26
1843 2436 2.489938 TTTGTCTTGGGAAGCGCTAT 57.510 45.000 12.05 0.00 0.00 2.97
1844 2437 1.737838 TTGTCTTGGGAAGCGCTATG 58.262 50.000 12.05 0.00 0.00 2.23
1845 2438 0.613260 TGTCTTGGGAAGCGCTATGT 59.387 50.000 12.05 0.00 0.00 2.29
1846 2439 1.003118 TGTCTTGGGAAGCGCTATGTT 59.997 47.619 12.05 0.00 0.00 2.71
1847 2440 2.235155 TGTCTTGGGAAGCGCTATGTTA 59.765 45.455 12.05 0.00 0.00 2.41
1848 2441 2.608090 GTCTTGGGAAGCGCTATGTTAC 59.392 50.000 12.05 0.00 0.00 2.50
1849 2442 2.235155 TCTTGGGAAGCGCTATGTTACA 59.765 45.455 12.05 1.24 0.00 2.41
1850 2443 2.309528 TGGGAAGCGCTATGTTACAG 57.690 50.000 12.05 0.00 0.00 2.74
1851 2444 1.553248 TGGGAAGCGCTATGTTACAGT 59.447 47.619 12.05 0.00 0.00 3.55
1852 2445 2.761767 TGGGAAGCGCTATGTTACAGTA 59.238 45.455 12.05 0.00 0.00 2.74
1853 2446 3.196039 TGGGAAGCGCTATGTTACAGTAA 59.804 43.478 12.05 0.00 0.00 2.24
1854 2447 3.554731 GGGAAGCGCTATGTTACAGTAAC 59.445 47.826 12.05 15.58 39.11 2.50
1890 2483 8.438676 ACTATCTCACATTAAATACTTGCCAC 57.561 34.615 0.00 0.00 0.00 5.01
1891 2484 8.046708 ACTATCTCACATTAAATACTTGCCACA 58.953 33.333 0.00 0.00 0.00 4.17
1892 2485 7.886629 ATCTCACATTAAATACTTGCCACAT 57.113 32.000 0.00 0.00 0.00 3.21
1893 2486 8.978874 ATCTCACATTAAATACTTGCCACATA 57.021 30.769 0.00 0.00 0.00 2.29
1894 2487 8.800370 TCTCACATTAAATACTTGCCACATAA 57.200 30.769 0.00 0.00 0.00 1.90
1895 2488 8.892723 TCTCACATTAAATACTTGCCACATAAG 58.107 33.333 0.00 0.00 0.00 1.73
1896 2489 7.479980 TCACATTAAATACTTGCCACATAAGC 58.520 34.615 0.00 0.00 0.00 3.09
1897 2490 7.121907 TCACATTAAATACTTGCCACATAAGCA 59.878 33.333 0.00 0.00 38.81 3.91
1922 2515 6.799926 AAAAATTTTGGAATGCGCTATGTT 57.200 29.167 9.73 0.00 0.00 2.71
1923 2516 7.897575 AAAAATTTTGGAATGCGCTATGTTA 57.102 28.000 9.73 0.00 0.00 2.41
1924 2517 6.885735 AAATTTTGGAATGCGCTATGTTAC 57.114 33.333 9.73 0.00 0.00 2.50
1925 2518 5.835113 ATTTTGGAATGCGCTATGTTACT 57.165 34.783 9.73 0.00 0.00 2.24
1926 2519 6.935741 ATTTTGGAATGCGCTATGTTACTA 57.064 33.333 9.73 0.00 0.00 1.82
1927 2520 5.984233 TTTGGAATGCGCTATGTTACTAG 57.016 39.130 9.73 0.00 0.00 2.57
1928 2521 4.665833 TGGAATGCGCTATGTTACTAGT 57.334 40.909 9.73 0.00 0.00 2.57
1929 2522 5.018539 TGGAATGCGCTATGTTACTAGTT 57.981 39.130 9.73 0.00 0.00 2.24
1930 2523 6.151663 TGGAATGCGCTATGTTACTAGTTA 57.848 37.500 9.73 0.00 0.00 2.24
1931 2524 6.575267 TGGAATGCGCTATGTTACTAGTTAA 58.425 36.000 9.73 0.00 0.00 2.01
1932 2525 6.700081 TGGAATGCGCTATGTTACTAGTTAAG 59.300 38.462 9.73 0.00 0.00 1.85
1933 2526 6.700520 GGAATGCGCTATGTTACTAGTTAAGT 59.299 38.462 9.73 0.00 42.62 2.24
1934 2527 7.224167 GGAATGCGCTATGTTACTAGTTAAGTT 59.776 37.037 9.73 0.00 39.80 2.66
1935 2528 9.241317 GAATGCGCTATGTTACTAGTTAAGTTA 57.759 33.333 9.73 0.00 39.80 2.24
1936 2529 7.975866 TGCGCTATGTTACTAGTTAAGTTAC 57.024 36.000 9.73 0.00 39.80 2.50
1937 2530 7.765307 TGCGCTATGTTACTAGTTAAGTTACT 58.235 34.615 9.73 0.00 38.33 2.24
1938 2531 7.912250 TGCGCTATGTTACTAGTTAAGTTACTC 59.088 37.037 9.73 0.00 38.33 2.59
1939 2532 7.378194 GCGCTATGTTACTAGTTAAGTTACTCC 59.622 40.741 0.00 0.00 38.33 3.85
1940 2533 7.859875 CGCTATGTTACTAGTTAAGTTACTCCC 59.140 40.741 0.00 0.00 38.33 4.30
1941 2534 8.689972 GCTATGTTACTAGTTAAGTTACTCCCA 58.310 37.037 0.00 0.00 38.33 4.37
1943 2536 8.661752 ATGTTACTAGTTAAGTTACTCCCACT 57.338 34.615 0.00 0.00 38.33 4.00
1944 2537 9.759473 ATGTTACTAGTTAAGTTACTCCCACTA 57.241 33.333 0.00 0.00 38.33 2.74
1945 2538 9.759473 TGTTACTAGTTAAGTTACTCCCACTAT 57.241 33.333 0.00 0.00 38.33 2.12
1947 2540 9.979897 TTACTAGTTAAGTTACTCCCACTATGA 57.020 33.333 0.00 0.00 39.80 2.15
1948 2541 8.291191 ACTAGTTAAGTTACTCCCACTATGAC 57.709 38.462 0.00 0.00 33.35 3.06
1949 2542 8.114743 ACTAGTTAAGTTACTCCCACTATGACT 58.885 37.037 0.00 0.00 33.35 3.41
1950 2543 9.624373 CTAGTTAAGTTACTCCCACTATGACTA 57.376 37.037 0.00 0.00 0.00 2.59
1951 2544 8.522542 AGTTAAGTTACTCCCACTATGACTAG 57.477 38.462 0.00 0.00 0.00 2.57
1952 2545 5.855740 AAGTTACTCCCACTATGACTAGC 57.144 43.478 0.00 0.00 0.00 3.42
1953 2546 4.216708 AGTTACTCCCACTATGACTAGCC 58.783 47.826 0.00 0.00 0.00 3.93
1954 2547 4.079096 AGTTACTCCCACTATGACTAGCCT 60.079 45.833 0.00 0.00 0.00 4.58
1955 2548 5.133999 AGTTACTCCCACTATGACTAGCCTA 59.866 44.000 0.00 0.00 0.00 3.93
1956 2549 4.537945 ACTCCCACTATGACTAGCCTAA 57.462 45.455 0.00 0.00 0.00 2.69
1957 2550 4.216708 ACTCCCACTATGACTAGCCTAAC 58.783 47.826 0.00 0.00 0.00 2.34
1958 2551 4.215908 CTCCCACTATGACTAGCCTAACA 58.784 47.826 0.00 0.00 0.00 2.41
1959 2552 4.215908 TCCCACTATGACTAGCCTAACAG 58.784 47.826 0.00 0.00 0.00 3.16
1960 2553 4.079385 TCCCACTATGACTAGCCTAACAGA 60.079 45.833 0.00 0.00 0.00 3.41
1961 2554 4.649674 CCCACTATGACTAGCCTAACAGAA 59.350 45.833 0.00 0.00 0.00 3.02
1962 2555 5.452077 CCCACTATGACTAGCCTAACAGAAC 60.452 48.000 0.00 0.00 0.00 3.01
1963 2556 5.274718 CACTATGACTAGCCTAACAGAACG 58.725 45.833 0.00 0.00 0.00 3.95
1964 2557 3.802948 ATGACTAGCCTAACAGAACGG 57.197 47.619 0.00 0.00 0.00 4.44
1965 2558 2.799017 TGACTAGCCTAACAGAACGGA 58.201 47.619 0.00 0.00 0.00 4.69
1966 2559 3.362706 TGACTAGCCTAACAGAACGGAT 58.637 45.455 0.00 0.00 0.00 4.18
1967 2560 3.130516 TGACTAGCCTAACAGAACGGATG 59.869 47.826 0.00 0.00 0.00 3.51
1968 2561 2.431057 ACTAGCCTAACAGAACGGATGG 59.569 50.000 0.00 0.00 0.00 3.51
1969 2562 1.276622 AGCCTAACAGAACGGATGGT 58.723 50.000 0.00 0.00 0.00 3.55
1970 2563 1.207329 AGCCTAACAGAACGGATGGTC 59.793 52.381 0.00 0.00 0.00 4.02
1971 2564 1.066430 GCCTAACAGAACGGATGGTCA 60.066 52.381 0.00 0.00 0.00 4.02
1972 2565 2.614481 GCCTAACAGAACGGATGGTCAA 60.614 50.000 0.00 0.00 0.00 3.18
1973 2566 3.262420 CCTAACAGAACGGATGGTCAAG 58.738 50.000 0.00 0.00 0.00 3.02
1974 2567 1.523758 AACAGAACGGATGGTCAAGC 58.476 50.000 0.00 0.00 0.00 4.01
1975 2568 0.396435 ACAGAACGGATGGTCAAGCA 59.604 50.000 0.00 0.00 0.00 3.91
1976 2569 1.003580 ACAGAACGGATGGTCAAGCAT 59.996 47.619 0.00 0.00 0.00 3.79
1977 2570 2.236146 ACAGAACGGATGGTCAAGCATA 59.764 45.455 0.00 0.00 0.00 3.14
1978 2571 3.118261 ACAGAACGGATGGTCAAGCATAT 60.118 43.478 0.00 0.00 0.00 1.78
1979 2572 3.879295 CAGAACGGATGGTCAAGCATATT 59.121 43.478 0.00 0.00 0.00 1.28
1980 2573 3.879295 AGAACGGATGGTCAAGCATATTG 59.121 43.478 0.00 0.00 0.00 1.90
1981 2574 1.949525 ACGGATGGTCAAGCATATTGC 59.050 47.619 0.00 0.00 45.46 3.56
1990 2583 4.979204 GCATATTGCATGCGCCAT 57.021 50.000 14.09 7.61 44.26 4.40
1991 2584 2.733127 GCATATTGCATGCGCCATC 58.267 52.632 14.09 0.00 44.26 3.51
1992 2585 0.734942 GCATATTGCATGCGCCATCC 60.735 55.000 14.09 0.00 44.26 3.51
1993 2586 0.108992 CATATTGCATGCGCCATCCC 60.109 55.000 14.09 0.00 37.32 3.85
1994 2587 1.252904 ATATTGCATGCGCCATCCCC 61.253 55.000 14.09 0.00 37.32 4.81
1995 2588 2.356173 TATTGCATGCGCCATCCCCT 62.356 55.000 14.09 0.00 37.32 4.79
1996 2589 2.356173 ATTGCATGCGCCATCCCCTA 62.356 55.000 14.09 0.00 37.32 3.53
1997 2590 2.034687 GCATGCGCCATCCCCTAT 59.965 61.111 4.18 0.00 0.00 2.57
1998 2591 2.042831 GCATGCGCCATCCCCTATC 61.043 63.158 4.18 0.00 0.00 2.08
1999 2592 1.377725 CATGCGCCATCCCCTATCC 60.378 63.158 4.18 0.00 0.00 2.59
2000 2593 1.539869 ATGCGCCATCCCCTATCCT 60.540 57.895 4.18 0.00 0.00 3.24
2001 2594 1.136329 ATGCGCCATCCCCTATCCTT 61.136 55.000 4.18 0.00 0.00 3.36
2002 2595 1.302832 GCGCCATCCCCTATCCTTG 60.303 63.158 0.00 0.00 0.00 3.61
2003 2596 2.056906 GCGCCATCCCCTATCCTTGT 62.057 60.000 0.00 0.00 0.00 3.16
2004 2597 0.250467 CGCCATCCCCTATCCTTGTG 60.250 60.000 0.00 0.00 0.00 3.33
2005 2598 0.111253 GCCATCCCCTATCCTTGTGG 59.889 60.000 0.00 0.00 0.00 4.17
2006 2599 0.773644 CCATCCCCTATCCTTGTGGG 59.226 60.000 0.00 0.00 40.59 4.61
2011 2604 2.664402 CCCTATCCTTGTGGGGAATG 57.336 55.000 0.00 0.00 41.25 2.67
2012 2605 1.852965 CCCTATCCTTGTGGGGAATGT 59.147 52.381 0.00 0.00 41.25 2.71
2013 2606 3.053077 CCCTATCCTTGTGGGGAATGTA 58.947 50.000 0.00 0.00 41.25 2.29
2014 2607 3.657727 CCCTATCCTTGTGGGGAATGTAT 59.342 47.826 0.00 0.00 41.25 2.29
2015 2608 4.263506 CCCTATCCTTGTGGGGAATGTATC 60.264 50.000 0.00 0.00 41.25 2.24
2016 2609 3.492102 ATCCTTGTGGGGAATGTATCG 57.508 47.619 0.00 0.00 39.02 2.92
2017 2610 1.488812 TCCTTGTGGGGAATGTATCGG 59.511 52.381 0.00 0.00 35.33 4.18
2018 2611 1.476833 CCTTGTGGGGAATGTATCGGG 60.477 57.143 0.00 0.00 0.00 5.14
2019 2612 1.211949 CTTGTGGGGAATGTATCGGGT 59.788 52.381 0.00 0.00 0.00 5.28
2020 2613 0.544223 TGTGGGGAATGTATCGGGTG 59.456 55.000 0.00 0.00 0.00 4.61
2021 2614 0.818040 GTGGGGAATGTATCGGGTGC 60.818 60.000 0.00 0.00 0.00 5.01
2022 2615 0.986019 TGGGGAATGTATCGGGTGCT 60.986 55.000 0.00 0.00 0.00 4.40
2023 2616 0.250338 GGGGAATGTATCGGGTGCTC 60.250 60.000 0.00 0.00 0.00 4.26
2024 2617 0.759346 GGGAATGTATCGGGTGCTCT 59.241 55.000 0.00 0.00 0.00 4.09
2025 2618 1.270358 GGGAATGTATCGGGTGCTCTC 60.270 57.143 0.00 0.00 0.00 3.20
2026 2619 1.412710 GGAATGTATCGGGTGCTCTCA 59.587 52.381 0.00 0.00 0.00 3.27
2027 2620 2.474816 GAATGTATCGGGTGCTCTCAC 58.525 52.381 0.00 0.00 42.40 3.51
2037 2630 1.517242 GTGCTCTCACCTTTGGAGTG 58.483 55.000 0.00 0.00 37.24 3.51
2038 2631 1.131638 TGCTCTCACCTTTGGAGTGT 58.868 50.000 0.00 0.00 36.58 3.55
2039 2632 1.490490 TGCTCTCACCTTTGGAGTGTT 59.510 47.619 0.00 0.00 36.58 3.32
2040 2633 2.092429 TGCTCTCACCTTTGGAGTGTTT 60.092 45.455 0.00 0.00 36.58 2.83
2041 2634 2.952310 GCTCTCACCTTTGGAGTGTTTT 59.048 45.455 0.00 0.00 36.58 2.43
2042 2635 3.003793 GCTCTCACCTTTGGAGTGTTTTC 59.996 47.826 0.00 0.00 36.58 2.29
2043 2636 3.202906 TCTCACCTTTGGAGTGTTTTCG 58.797 45.455 0.00 0.00 36.58 3.46
2044 2637 2.290641 CTCACCTTTGGAGTGTTTTCGG 59.709 50.000 0.00 0.00 36.58 4.30
2045 2638 2.021457 CACCTTTGGAGTGTTTTCGGT 58.979 47.619 0.00 0.00 0.00 4.69
2046 2639 2.021457 ACCTTTGGAGTGTTTTCGGTG 58.979 47.619 0.00 0.00 0.00 4.94
2047 2640 1.269051 CCTTTGGAGTGTTTTCGGTGC 60.269 52.381 0.00 0.00 0.00 5.01
2048 2641 1.676006 CTTTGGAGTGTTTTCGGTGCT 59.324 47.619 0.00 0.00 0.00 4.40
2049 2642 1.305201 TTGGAGTGTTTTCGGTGCTC 58.695 50.000 0.00 0.00 0.00 4.26
2050 2643 0.534203 TGGAGTGTTTTCGGTGCTCC 60.534 55.000 0.00 0.00 44.31 4.70
2051 2644 0.534203 GGAGTGTTTTCGGTGCTCCA 60.534 55.000 5.52 0.00 43.70 3.86
2052 2645 0.586802 GAGTGTTTTCGGTGCTCCAC 59.413 55.000 5.52 0.00 0.00 4.02
2053 2646 1.157870 AGTGTTTTCGGTGCTCCACG 61.158 55.000 5.52 0.00 34.83 4.94
2054 2647 2.251371 GTTTTCGGTGCTCCACGC 59.749 61.111 5.52 0.00 34.83 5.34
2066 2659 4.250116 TGCTCCACGCATTTTAAAATGT 57.750 36.364 31.43 17.08 45.47 2.71
2067 2660 4.626042 TGCTCCACGCATTTTAAAATGTT 58.374 34.783 31.43 20.82 45.47 2.71
2068 2661 4.683781 TGCTCCACGCATTTTAAAATGTTC 59.316 37.500 31.43 19.86 45.47 3.18
2069 2662 4.201485 GCTCCACGCATTTTAAAATGTTCG 60.201 41.667 31.43 28.49 45.77 3.95
2070 2663 4.861210 TCCACGCATTTTAAAATGTTCGT 58.139 34.783 31.43 28.98 45.77 3.85
2071 2664 5.998553 TCCACGCATTTTAAAATGTTCGTA 58.001 33.333 29.45 20.03 45.77 3.43
2072 2665 6.436261 TCCACGCATTTTAAAATGTTCGTAA 58.564 32.000 29.45 22.38 45.77 3.18
2073 2666 6.916387 TCCACGCATTTTAAAATGTTCGTAAA 59.084 30.769 29.45 22.16 45.77 2.01
2074 2667 7.434307 TCCACGCATTTTAAAATGTTCGTAAAA 59.566 29.630 29.45 20.61 45.77 1.52
2075 2668 8.217778 CCACGCATTTTAAAATGTTCGTAAAAT 58.782 29.630 29.45 15.26 45.77 1.82
2076 2669 9.574401 CACGCATTTTAAAATGTTCGTAAAATT 57.426 25.926 29.45 14.78 45.77 1.82
2093 2686 9.737427 TCGTAAAATTTTGAAACAAATCTAGCA 57.263 25.926 13.76 0.00 0.00 3.49
2094 2687 9.777843 CGTAAAATTTTGAAACAAATCTAGCAC 57.222 29.630 13.76 0.00 0.00 4.40
2099 2692 9.545105 AATTTTGAAACAAATCTAGCACATTCA 57.455 25.926 0.00 0.00 0.00 2.57
2100 2693 9.715121 ATTTTGAAACAAATCTAGCACATTCAT 57.285 25.926 0.00 0.00 0.00 2.57
2106 2699 9.979578 AAACAAATCTAGCACATTCATAAAACA 57.020 25.926 0.00 0.00 0.00 2.83
2108 2701 9.793252 ACAAATCTAGCACATTCATAAAACATC 57.207 29.630 0.00 0.00 0.00 3.06
2109 2702 9.791820 CAAATCTAGCACATTCATAAAACATCA 57.208 29.630 0.00 0.00 0.00 3.07
2112 2705 9.961265 ATCTAGCACATTCATAAAACATCAATG 57.039 29.630 0.00 0.00 0.00 2.82
2113 2706 8.959548 TCTAGCACATTCATAAAACATCAATGT 58.040 29.630 0.00 0.00 44.20 2.71
2116 2709 9.524106 AGCACATTCATAAAACATCAATGTATG 57.476 29.630 0.00 0.00 40.80 2.39
2117 2710 9.304731 GCACATTCATAAAACATCAATGTATGT 57.695 29.630 0.00 0.00 40.23 2.29
2123 2716 9.838975 TCATAAAACATCAATGTATGTTGTCAC 57.161 29.630 10.27 0.00 46.72 3.67
2124 2717 9.623350 CATAAAACATCAATGTATGTTGTCACA 57.377 29.630 10.27 0.00 46.72 3.58
2126 2719 8.939201 AAAACATCAATGTATGTTGTCACAAA 57.061 26.923 10.27 0.00 46.72 2.83
2127 2720 8.939201 AAACATCAATGTATGTTGTCACAAAA 57.061 26.923 10.27 0.00 46.72 2.44
2128 2721 9.545105 AAACATCAATGTATGTTGTCACAAAAT 57.455 25.926 0.00 0.00 46.72 1.82
2129 2722 9.545105 AACATCAATGTATGTTGTCACAAAATT 57.455 25.926 0.00 0.00 45.90 1.82
2130 2723 9.545105 ACATCAATGTATGTTGTCACAAAATTT 57.455 25.926 0.00 0.00 37.39 1.82
2132 2725 9.761504 ATCAATGTATGTTGTCACAAAATTTCA 57.238 25.926 0.00 0.02 36.16 2.69
2133 2726 9.591792 TCAATGTATGTTGTCACAAAATTTCAA 57.408 25.926 0.00 0.00 36.16 2.69
2137 2730 9.591792 TGTATGTTGTCACAAAATTTCAAATCA 57.408 25.926 0.00 0.00 36.16 2.57
2155 2748 9.719279 TTCAAATCAAAATTCAAAACATTGCTC 57.281 25.926 0.00 0.00 0.00 4.26
2156 2749 8.063038 TCAAATCAAAATTCAAAACATTGCTCG 58.937 29.630 0.00 0.00 0.00 5.03
2157 2750 7.712264 AATCAAAATTCAAAACATTGCTCGA 57.288 28.000 0.00 0.00 0.00 4.04
2158 2751 6.752335 TCAAAATTCAAAACATTGCTCGAG 57.248 33.333 8.45 8.45 0.00 4.04
2159 2752 6.502652 TCAAAATTCAAAACATTGCTCGAGA 58.497 32.000 18.75 0.00 0.00 4.04
2160 2753 7.147312 TCAAAATTCAAAACATTGCTCGAGAT 58.853 30.769 18.75 0.00 0.00 2.75
2161 2754 8.296000 TCAAAATTCAAAACATTGCTCGAGATA 58.704 29.630 18.75 2.54 0.00 1.98
2162 2755 8.368126 CAAAATTCAAAACATTGCTCGAGATAC 58.632 33.333 18.75 0.00 0.00 2.24
2163 2756 6.741992 ATTCAAAACATTGCTCGAGATACA 57.258 33.333 18.75 1.12 0.00 2.29
2164 2757 6.552859 TTCAAAACATTGCTCGAGATACAA 57.447 33.333 18.75 11.56 0.00 2.41
2165 2758 6.552859 TCAAAACATTGCTCGAGATACAAA 57.447 33.333 18.75 2.00 0.00 2.83
2166 2759 6.964908 TCAAAACATTGCTCGAGATACAAAA 58.035 32.000 18.75 0.13 0.00 2.44
2167 2760 7.421599 TCAAAACATTGCTCGAGATACAAAAA 58.578 30.769 18.75 0.00 0.00 1.94
2190 2783 8.973835 AAAAGACAAAACTGACGTTAATTTGA 57.026 26.923 18.88 0.00 31.86 2.69
2191 2784 9.581099 AAAAGACAAAACTGACGTTAATTTGAT 57.419 25.926 18.88 8.82 31.86 2.57
2198 2791 8.895932 AAACTGACGTTAATTTGATAATGAGC 57.104 30.769 0.00 0.00 31.86 4.26
2199 2792 7.016361 ACTGACGTTAATTTGATAATGAGCC 57.984 36.000 0.00 0.00 0.00 4.70
2200 2793 6.597672 ACTGACGTTAATTTGATAATGAGCCA 59.402 34.615 0.00 0.00 0.00 4.75
2201 2794 7.120579 ACTGACGTTAATTTGATAATGAGCCAA 59.879 33.333 0.00 0.00 0.00 4.52
2202 2795 7.821652 TGACGTTAATTTGATAATGAGCCAAA 58.178 30.769 0.00 0.00 34.76 3.28
2203 2796 8.465999 TGACGTTAATTTGATAATGAGCCAAAT 58.534 29.630 0.00 0.00 40.86 2.32
2204 2797 8.856490 ACGTTAATTTGATAATGAGCCAAATC 57.144 30.769 0.00 0.00 38.94 2.17
2205 2798 8.686334 ACGTTAATTTGATAATGAGCCAAATCT 58.314 29.630 0.00 0.00 38.94 2.40
2210 2803 9.538508 AATTTGATAATGAGCCAAATCTAAAGC 57.461 29.630 0.00 0.00 38.94 3.51
2211 2804 6.639632 TGATAATGAGCCAAATCTAAAGCC 57.360 37.500 0.00 0.00 0.00 4.35
2212 2805 6.128486 TGATAATGAGCCAAATCTAAAGCCA 58.872 36.000 0.00 0.00 0.00 4.75
2213 2806 6.606796 TGATAATGAGCCAAATCTAAAGCCAA 59.393 34.615 0.00 0.00 0.00 4.52
2214 2807 4.725790 ATGAGCCAAATCTAAAGCCAAC 57.274 40.909 0.00 0.00 0.00 3.77
2215 2808 3.766545 TGAGCCAAATCTAAAGCCAACT 58.233 40.909 0.00 0.00 0.00 3.16
2216 2809 4.151883 TGAGCCAAATCTAAAGCCAACTT 58.848 39.130 0.00 0.00 37.90 2.66
2217 2810 5.321102 TGAGCCAAATCTAAAGCCAACTTA 58.679 37.500 0.00 0.00 34.05 2.24
2218 2811 5.951747 TGAGCCAAATCTAAAGCCAACTTAT 59.048 36.000 0.00 0.00 34.05 1.73
2219 2812 6.127647 TGAGCCAAATCTAAAGCCAACTTATG 60.128 38.462 0.00 0.00 34.05 1.90
2220 2813 5.716703 AGCCAAATCTAAAGCCAACTTATGT 59.283 36.000 0.00 0.00 34.05 2.29
2221 2814 6.211384 AGCCAAATCTAAAGCCAACTTATGTT 59.789 34.615 0.00 0.00 34.05 2.71
2222 2815 7.396055 AGCCAAATCTAAAGCCAACTTATGTTA 59.604 33.333 0.00 0.00 34.05 2.41
2223 2816 8.197439 GCCAAATCTAAAGCCAACTTATGTTAT 58.803 33.333 0.00 0.00 34.05 1.89
2224 2817 9.520204 CCAAATCTAAAGCCAACTTATGTTATG 57.480 33.333 0.00 0.00 34.05 1.90
2229 2822 9.595823 TCTAAAGCCAACTTATGTTATGTACTC 57.404 33.333 0.00 0.00 34.05 2.59
2230 2823 7.625828 AAAGCCAACTTATGTTATGTACTCC 57.374 36.000 0.00 0.00 34.05 3.85
2231 2824 5.681639 AGCCAACTTATGTTATGTACTCCC 58.318 41.667 0.00 0.00 34.60 4.30
2232 2825 4.820173 GCCAACTTATGTTATGTACTCCCC 59.180 45.833 0.00 0.00 34.60 4.81
2233 2826 5.397559 GCCAACTTATGTTATGTACTCCCCT 60.398 44.000 0.00 0.00 34.60 4.79
2234 2827 6.659824 CCAACTTATGTTATGTACTCCCCTT 58.340 40.000 0.00 0.00 34.60 3.95
2235 2828 7.636413 GCCAACTTATGTTATGTACTCCCCTTA 60.636 40.741 0.00 0.00 34.60 2.69
2236 2829 8.437575 CCAACTTATGTTATGTACTCCCCTTAT 58.562 37.037 0.00 0.00 34.60 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 0.318107 CTGTTTGAAGCCTTGCGGTG 60.318 55.000 0.00 0.00 0.00 4.94
73 74 0.465460 TCTGTTTGAAGCCTTGCGGT 60.465 50.000 0.00 0.00 0.00 5.68
74 75 0.667993 TTCTGTTTGAAGCCTTGCGG 59.332 50.000 0.00 0.00 0.00 5.69
145 148 0.161024 CGAACTCGTCAAACCTTCGC 59.839 55.000 0.00 0.00 34.11 4.70
319 323 3.236047 TGGTTTCTTTTTCTTAGGGGGC 58.764 45.455 0.00 0.00 0.00 5.80
349 609 7.570607 ACTCCATTAATCTTTCTCTACCTCCAT 59.429 37.037 0.00 0.00 0.00 3.41
363 623 6.406370 TCGTCATTTGTCACTCCATTAATCT 58.594 36.000 0.00 0.00 0.00 2.40
388 648 3.436577 TGGATCGGAGGGAGTAGTATC 57.563 52.381 0.00 0.00 0.00 2.24
452 715 4.994852 TCCCTCTGATAAAAACAAGTGTCG 59.005 41.667 0.00 0.00 0.00 4.35
460 723 8.604890 CGAGAAATTACTCCCTCTGATAAAAAC 58.395 37.037 0.00 0.00 33.83 2.43
485 939 4.859629 ATAAAAAGTCTTAAGCGCCTCG 57.140 40.909 2.29 0.00 0.00 4.63
539 993 6.169800 AGCTTAGAGATTCTTTGTGAAGGTC 58.830 40.000 0.00 0.00 38.18 3.85
604 1058 2.780065 TACATGTACGCGGGTGTATC 57.220 50.000 16.34 3.93 0.00 2.24
729 1193 3.747976 GCATGAACGTGGTGGGGC 61.748 66.667 0.00 0.00 0.00 5.80
891 1382 2.735134 GTGCGGCGTTATTTATAGAGGG 59.265 50.000 9.37 0.00 0.00 4.30
915 1406 1.381928 GGCGAGGAGACATGGACGTA 61.382 60.000 0.00 0.00 0.00 3.57
955 1446 2.806929 CTGGAGGAGAGCAGAGCG 59.193 66.667 0.00 0.00 0.00 5.03
961 1452 1.340405 TGGATTTTGCTGGAGGAGAGC 60.340 52.381 0.00 0.00 36.95 4.09
979 1470 2.234661 TCCTGTATGTTCTGCTCTGTGG 59.765 50.000 0.00 0.00 0.00 4.17
1264 1783 1.338020 TCCACGATCGAGATCACCATG 59.662 52.381 24.34 5.83 37.69 3.66
1265 1784 1.692411 TCCACGATCGAGATCACCAT 58.308 50.000 24.34 0.00 37.69 3.55
1311 1830 2.931325 GCAGCACAGAGAGAATTGAGAG 59.069 50.000 0.00 0.00 0.00 3.20
1320 1839 5.976534 CAGTAATTACTAGCAGCACAGAGAG 59.023 44.000 17.62 0.00 34.13 3.20
1323 1842 5.047306 ACACAGTAATTACTAGCAGCACAGA 60.047 40.000 17.62 0.00 34.13 3.41
1331 1850 8.627403 TGGATACAGTACACAGTAATTACTAGC 58.373 37.037 17.62 2.25 46.17 3.42
1362 1881 8.414003 ACGAGTACATATAATTCACATCACAGT 58.586 33.333 0.00 0.00 0.00 3.55
1363 1882 8.803201 ACGAGTACATATAATTCACATCACAG 57.197 34.615 0.00 0.00 0.00 3.66
1364 1883 9.594478 AAACGAGTACATATAATTCACATCACA 57.406 29.630 0.00 0.00 0.00 3.58
1365 1884 9.849607 CAAACGAGTACATATAATTCACATCAC 57.150 33.333 0.00 0.00 0.00 3.06
1369 1888 9.810545 TGATCAAACGAGTACATATAATTCACA 57.189 29.630 0.00 0.00 0.00 3.58
1389 1958 6.183360 CGGCTCTATTATATCTCCGTGATCAA 60.183 42.308 0.00 0.00 36.65 2.57
1390 1959 5.297029 CGGCTCTATTATATCTCCGTGATCA 59.703 44.000 0.00 0.00 36.65 2.92
1391 1960 5.297278 ACGGCTCTATTATATCTCCGTGATC 59.703 44.000 2.44 0.00 45.60 2.92
1392 1961 5.194432 ACGGCTCTATTATATCTCCGTGAT 58.806 41.667 2.44 0.00 45.60 3.06
1394 1963 4.966965 ACGGCTCTATTATATCTCCGTG 57.033 45.455 2.44 0.00 45.60 4.94
1396 1965 5.312120 ACAACGGCTCTATTATATCTCCG 57.688 43.478 0.00 0.00 40.98 4.63
1397 1966 6.926313 AGAACAACGGCTCTATTATATCTCC 58.074 40.000 0.00 0.00 0.00 3.71
1398 1967 6.743627 CGAGAACAACGGCTCTATTATATCTC 59.256 42.308 0.00 0.00 0.00 2.75
1400 1969 5.286558 GCGAGAACAACGGCTCTATTATATC 59.713 44.000 0.00 0.00 0.00 1.63
1401 1970 5.162075 GCGAGAACAACGGCTCTATTATAT 58.838 41.667 0.00 0.00 0.00 0.86
1402 1971 4.543692 GCGAGAACAACGGCTCTATTATA 58.456 43.478 0.00 0.00 0.00 0.98
1403 1972 3.381949 GCGAGAACAACGGCTCTATTAT 58.618 45.455 0.00 0.00 0.00 1.28
1404 1973 2.805845 GCGAGAACAACGGCTCTATTA 58.194 47.619 0.00 0.00 0.00 0.98
1405 1974 1.641577 GCGAGAACAACGGCTCTATT 58.358 50.000 0.00 0.00 0.00 1.73
1406 1975 3.347411 GCGAGAACAACGGCTCTAT 57.653 52.632 0.00 0.00 0.00 1.98
1407 1976 4.883026 GCGAGAACAACGGCTCTA 57.117 55.556 0.00 0.00 0.00 2.43
1451 2044 9.750125 GATCACTGAACATACTCAACACATATA 57.250 33.333 0.00 0.00 0.00 0.86
1452 2045 8.260114 TGATCACTGAACATACTCAACACATAT 58.740 33.333 0.00 0.00 0.00 1.78
1453 2046 7.545615 GTGATCACTGAACATACTCAACACATA 59.454 37.037 18.83 0.00 0.00 2.29
1454 2047 6.369890 GTGATCACTGAACATACTCAACACAT 59.630 38.462 18.83 0.00 0.00 3.21
1455 2048 5.696270 GTGATCACTGAACATACTCAACACA 59.304 40.000 18.83 0.00 0.00 3.72
1471 2064 3.008375 ACCAGCATAACACAGTGATCACT 59.992 43.478 22.89 22.89 43.61 3.41
1480 2073 6.056090 TCCATTACTTACCAGCATAACACA 57.944 37.500 0.00 0.00 0.00 3.72
1483 2076 8.451908 AATTCTCCATTACTTACCAGCATAAC 57.548 34.615 0.00 0.00 0.00 1.89
1487 2080 5.652014 CCAAATTCTCCATTACTTACCAGCA 59.348 40.000 0.00 0.00 0.00 4.41
1490 2083 5.254267 TCCCCAAATTCTCCATTACTTACCA 59.746 40.000 0.00 0.00 0.00 3.25
1510 2103 2.079925 GCGAATAAGCTGATCATCCCC 58.920 52.381 0.00 0.00 0.00 4.81
1529 2122 2.083774 GGGGCCTTTTATGCAAAAAGC 58.916 47.619 19.87 10.68 39.40 3.51
1530 2123 2.289382 ACGGGGCCTTTTATGCAAAAAG 60.289 45.455 19.00 19.00 37.08 2.27
1531 2124 1.694696 ACGGGGCCTTTTATGCAAAAA 59.305 42.857 0.84 0.00 33.33 1.94
1532 2125 1.001406 CACGGGGCCTTTTATGCAAAA 59.999 47.619 0.84 0.00 32.73 2.44
1533 2126 0.605589 CACGGGGCCTTTTATGCAAA 59.394 50.000 0.84 0.00 0.00 3.68
1534 2127 1.882989 GCACGGGGCCTTTTATGCAA 61.883 55.000 0.84 0.00 36.11 4.08
1535 2128 2.347322 GCACGGGGCCTTTTATGCA 61.347 57.895 0.84 0.00 36.11 3.96
1536 2129 2.347322 TGCACGGGGCCTTTTATGC 61.347 57.895 0.84 6.88 43.89 3.14
1537 2130 1.247419 TGTGCACGGGGCCTTTTATG 61.247 55.000 13.13 0.00 43.89 1.90
1538 2131 0.540830 TTGTGCACGGGGCCTTTTAT 60.541 50.000 13.13 0.00 43.89 1.40
1539 2132 0.755698 TTTGTGCACGGGGCCTTTTA 60.756 50.000 13.13 0.00 43.89 1.52
1540 2133 1.617947 TTTTGTGCACGGGGCCTTTT 61.618 50.000 13.13 0.00 43.89 2.27
1541 2134 1.617947 TTTTTGTGCACGGGGCCTTT 61.618 50.000 13.13 0.00 43.89 3.11
1542 2135 2.060980 TTTTTGTGCACGGGGCCTT 61.061 52.632 13.13 0.00 43.89 4.35
1543 2136 2.443016 TTTTTGTGCACGGGGCCT 60.443 55.556 13.13 0.00 43.89 5.19
1574 2167 6.814506 ACTAGTTGTATACGCATAGGGTAG 57.185 41.667 0.00 0.00 34.62 3.18
1582 2175 7.104043 AGATTTGGTACTAGTTGTATACGCA 57.896 36.000 0.00 0.00 33.23 5.24
1583 2176 8.962111 GTTAGATTTGGTACTAGTTGTATACGC 58.038 37.037 0.00 0.00 33.23 4.42
1615 2208 2.341176 CCTTGGTTGGCTTGCTGC 59.659 61.111 0.00 0.00 41.94 5.25
1616 2209 1.531365 TCCCTTGGTTGGCTTGCTG 60.531 57.895 0.00 0.00 0.00 4.41
1617 2210 1.531602 GTCCCTTGGTTGGCTTGCT 60.532 57.895 0.00 0.00 0.00 3.91
1618 2211 1.187567 ATGTCCCTTGGTTGGCTTGC 61.188 55.000 0.00 0.00 0.00 4.01
1619 2212 0.604578 CATGTCCCTTGGTTGGCTTG 59.395 55.000 0.00 0.00 0.00 4.01
1620 2213 1.187567 GCATGTCCCTTGGTTGGCTT 61.188 55.000 0.00 0.00 0.00 4.35
1621 2214 1.607467 GCATGTCCCTTGGTTGGCT 60.607 57.895 0.00 0.00 0.00 4.75
1622 2215 2.649129 GGCATGTCCCTTGGTTGGC 61.649 63.158 0.00 0.00 0.00 4.52
1623 2216 1.228831 TGGCATGTCCCTTGGTTGG 60.229 57.895 0.00 0.00 0.00 3.77
1624 2217 1.535204 GGTGGCATGTCCCTTGGTTG 61.535 60.000 0.00 0.00 0.00 3.77
1625 2218 1.228862 GGTGGCATGTCCCTTGGTT 60.229 57.895 0.00 0.00 0.00 3.67
1626 2219 2.440599 GGTGGCATGTCCCTTGGT 59.559 61.111 0.00 0.00 0.00 3.67
1627 2220 1.978617 GTGGTGGCATGTCCCTTGG 60.979 63.158 0.00 0.00 0.00 3.61
1628 2221 0.612732 ATGTGGTGGCATGTCCCTTG 60.613 55.000 0.00 0.00 0.00 3.61
1629 2222 0.323725 GATGTGGTGGCATGTCCCTT 60.324 55.000 0.00 0.00 0.00 3.95
1630 2223 1.304282 GATGTGGTGGCATGTCCCT 59.696 57.895 0.00 0.00 0.00 4.20
1631 2224 1.001020 TGATGTGGTGGCATGTCCC 60.001 57.895 0.00 0.00 0.00 4.46
1632 2225 0.608856 TGTGATGTGGTGGCATGTCC 60.609 55.000 0.00 0.00 0.00 4.02
1633 2226 1.133598 CATGTGATGTGGTGGCATGTC 59.866 52.381 0.00 0.00 34.10 3.06
1634 2227 1.179152 CATGTGATGTGGTGGCATGT 58.821 50.000 0.00 0.00 34.10 3.21
1635 2228 0.458260 CCATGTGATGTGGTGGCATG 59.542 55.000 0.00 0.00 37.32 4.06
1636 2229 2.890612 CCATGTGATGTGGTGGCAT 58.109 52.632 0.00 0.00 31.96 4.40
1637 2230 4.419502 CCATGTGATGTGGTGGCA 57.580 55.556 0.00 0.00 31.96 4.92
1639 2232 3.189921 CGCCATGTGATGTGGTGG 58.810 61.111 0.00 0.00 42.22 4.61
1640 2233 1.243342 AACCGCCATGTGATGTGGTG 61.243 55.000 5.79 0.00 44.81 4.17
1641 2234 1.074775 AACCGCCATGTGATGTGGT 59.925 52.632 0.00 0.00 38.34 4.16
1642 2235 1.507630 CAACCGCCATGTGATGTGG 59.492 57.895 0.00 0.00 39.80 4.17
1643 2236 1.507630 CCAACCGCCATGTGATGTG 59.492 57.895 0.00 0.00 0.00 3.21
1644 2237 2.342650 GCCAACCGCCATGTGATGT 61.343 57.895 0.00 0.00 0.00 3.06
1645 2238 1.875420 TTGCCAACCGCCATGTGATG 61.875 55.000 0.00 0.00 36.24 3.07
1646 2239 0.971959 ATTGCCAACCGCCATGTGAT 60.972 50.000 0.00 0.00 36.24 3.06
1647 2240 1.606025 ATTGCCAACCGCCATGTGA 60.606 52.632 0.00 0.00 36.24 3.58
1689 2282 1.009060 TCCCCACTATGACCAGCCTTA 59.991 52.381 0.00 0.00 0.00 2.69
1690 2283 0.253160 TCCCCACTATGACCAGCCTT 60.253 55.000 0.00 0.00 0.00 4.35
1691 2284 0.692419 CTCCCCACTATGACCAGCCT 60.692 60.000 0.00 0.00 0.00 4.58
1692 2285 0.983378 ACTCCCCACTATGACCAGCC 60.983 60.000 0.00 0.00 0.00 4.85
1693 2286 1.789523 TACTCCCCACTATGACCAGC 58.210 55.000 0.00 0.00 0.00 4.85
1694 2287 3.375699 AGTTACTCCCCACTATGACCAG 58.624 50.000 0.00 0.00 0.00 4.00
1695 2288 3.484953 AGTTACTCCCCACTATGACCA 57.515 47.619 0.00 0.00 0.00 4.02
1696 2289 5.068855 GTCTAAGTTACTCCCCACTATGACC 59.931 48.000 0.00 0.00 0.00 4.02
1697 2290 5.892686 AGTCTAAGTTACTCCCCACTATGAC 59.107 44.000 0.00 0.00 0.00 3.06
1698 2291 6.088541 AGTCTAAGTTACTCCCCACTATGA 57.911 41.667 0.00 0.00 0.00 2.15
1699 2292 7.013464 CACTAGTCTAAGTTACTCCCCACTATG 59.987 44.444 0.00 0.00 0.00 2.23
1700 2293 7.061688 CACTAGTCTAAGTTACTCCCCACTAT 58.938 42.308 0.00 0.00 0.00 2.12
1701 2294 6.012157 ACACTAGTCTAAGTTACTCCCCACTA 60.012 42.308 0.00 0.00 0.00 2.74
1702 2295 5.222296 ACACTAGTCTAAGTTACTCCCCACT 60.222 44.000 0.00 0.00 0.00 4.00
1703 2296 5.015515 ACACTAGTCTAAGTTACTCCCCAC 58.984 45.833 0.00 0.00 0.00 4.61
1704 2297 5.222192 TGACACTAGTCTAAGTTACTCCCCA 60.222 44.000 0.00 0.00 45.20 4.96
1705 2298 5.259632 TGACACTAGTCTAAGTTACTCCCC 58.740 45.833 0.00 0.00 45.20 4.81
1706 2299 8.569641 CATATGACACTAGTCTAAGTTACTCCC 58.430 40.741 0.00 0.00 45.20 4.30
1707 2300 8.077386 GCATATGACACTAGTCTAAGTTACTCC 58.923 40.741 6.97 0.00 45.20 3.85
1708 2301 8.622157 TGCATATGACACTAGTCTAAGTTACTC 58.378 37.037 6.97 0.00 45.20 2.59
1709 2302 8.521170 TGCATATGACACTAGTCTAAGTTACT 57.479 34.615 6.97 0.00 45.20 2.24
1712 2305 9.751542 GTTATGCATATGACACTAGTCTAAGTT 57.248 33.333 7.36 0.00 45.20 2.66
1713 2306 8.914011 TGTTATGCATATGACACTAGTCTAAGT 58.086 33.333 7.36 0.00 45.20 2.24
1714 2307 9.186323 GTGTTATGCATATGACACTAGTCTAAG 57.814 37.037 24.79 0.00 45.35 2.18
1724 2317 8.914011 ACTTAGACTAGTGTTATGCATATGACA 58.086 33.333 7.36 7.19 31.18 3.58
1725 2318 9.751542 AACTTAGACTAGTGTTATGCATATGAC 57.248 33.333 7.36 7.33 0.00 3.06
1765 2358 9.938280 AAGACACTACTATTATGTTACTTTGCA 57.062 29.630 0.00 0.00 0.00 4.08
1773 2366 9.148879 AGCCATCTAAGACACTACTATTATGTT 57.851 33.333 0.00 0.00 0.00 2.71
1774 2367 8.713708 AGCCATCTAAGACACTACTATTATGT 57.286 34.615 0.00 0.00 0.00 2.29
1775 2368 9.632807 GAAGCCATCTAAGACACTACTATTATG 57.367 37.037 0.00 0.00 0.00 1.90
1776 2369 9.368416 TGAAGCCATCTAAGACACTACTATTAT 57.632 33.333 0.00 0.00 0.00 1.28
1777 2370 8.762481 TGAAGCCATCTAAGACACTACTATTA 57.238 34.615 0.00 0.00 0.00 0.98
1778 2371 7.661536 TGAAGCCATCTAAGACACTACTATT 57.338 36.000 0.00 0.00 0.00 1.73
1779 2372 7.847711 ATGAAGCCATCTAAGACACTACTAT 57.152 36.000 0.00 0.00 0.00 2.12
1780 2373 7.661536 AATGAAGCCATCTAAGACACTACTA 57.338 36.000 0.00 0.00 31.40 1.82
1781 2374 6.552445 AATGAAGCCATCTAAGACACTACT 57.448 37.500 0.00 0.00 31.40 2.57
1782 2375 8.894768 ATAAATGAAGCCATCTAAGACACTAC 57.105 34.615 0.00 0.00 31.40 2.73
1784 2377 9.553064 CTAATAAATGAAGCCATCTAAGACACT 57.447 33.333 0.00 0.00 31.40 3.55
1785 2378 8.286097 GCTAATAAATGAAGCCATCTAAGACAC 58.714 37.037 0.00 0.00 31.40 3.67
1786 2379 8.213679 AGCTAATAAATGAAGCCATCTAAGACA 58.786 33.333 0.00 0.00 36.92 3.41
1787 2380 8.614469 AGCTAATAAATGAAGCCATCTAAGAC 57.386 34.615 0.00 0.00 36.92 3.01
1788 2381 9.060347 CAAGCTAATAAATGAAGCCATCTAAGA 57.940 33.333 0.00 0.00 36.92 2.10
1789 2382 8.844244 ACAAGCTAATAAATGAAGCCATCTAAG 58.156 33.333 0.00 0.00 36.92 2.18
1790 2383 8.752005 ACAAGCTAATAAATGAAGCCATCTAA 57.248 30.769 0.00 0.00 36.92 2.10
1791 2384 9.494271 CTACAAGCTAATAAATGAAGCCATCTA 57.506 33.333 0.00 0.00 36.92 1.98
1792 2385 8.213679 TCTACAAGCTAATAAATGAAGCCATCT 58.786 33.333 0.00 0.00 36.92 2.90
1793 2386 8.286097 GTCTACAAGCTAATAAATGAAGCCATC 58.714 37.037 0.00 0.00 36.92 3.51
1794 2387 7.995488 AGTCTACAAGCTAATAAATGAAGCCAT 59.005 33.333 0.00 0.00 36.92 4.40
1795 2388 7.338710 AGTCTACAAGCTAATAAATGAAGCCA 58.661 34.615 0.00 0.00 36.92 4.75
1796 2389 7.793927 AGTCTACAAGCTAATAAATGAAGCC 57.206 36.000 0.00 0.00 36.92 4.35
1807 2400 8.999431 CCAAGACAAAATAAGTCTACAAGCTAA 58.001 33.333 0.00 0.00 45.11 3.09
1808 2401 7.606456 CCCAAGACAAAATAAGTCTACAAGCTA 59.394 37.037 0.00 0.00 45.11 3.32
1809 2402 6.431234 CCCAAGACAAAATAAGTCTACAAGCT 59.569 38.462 0.00 0.00 45.11 3.74
1810 2403 6.430000 TCCCAAGACAAAATAAGTCTACAAGC 59.570 38.462 0.00 0.00 45.11 4.01
1811 2404 7.979444 TCCCAAGACAAAATAAGTCTACAAG 57.021 36.000 0.00 0.00 45.11 3.16
1812 2405 7.040686 GCTTCCCAAGACAAAATAAGTCTACAA 60.041 37.037 0.00 0.00 45.11 2.41
1813 2406 6.430000 GCTTCCCAAGACAAAATAAGTCTACA 59.570 38.462 0.00 0.00 45.11 2.74
1814 2407 6.402226 CGCTTCCCAAGACAAAATAAGTCTAC 60.402 42.308 0.00 0.00 45.11 2.59
1815 2408 5.642063 CGCTTCCCAAGACAAAATAAGTCTA 59.358 40.000 0.00 0.00 45.11 2.59
1817 2410 4.723248 CGCTTCCCAAGACAAAATAAGTC 58.277 43.478 0.00 0.00 36.26 3.01
1818 2411 3.057526 GCGCTTCCCAAGACAAAATAAGT 60.058 43.478 0.00 0.00 0.00 2.24
1819 2412 3.191371 AGCGCTTCCCAAGACAAAATAAG 59.809 43.478 2.64 0.00 0.00 1.73
1820 2413 3.153919 AGCGCTTCCCAAGACAAAATAA 58.846 40.909 2.64 0.00 0.00 1.40
1821 2414 2.790433 AGCGCTTCCCAAGACAAAATA 58.210 42.857 2.64 0.00 0.00 1.40
1822 2415 1.620822 AGCGCTTCCCAAGACAAAAT 58.379 45.000 2.64 0.00 0.00 1.82
1823 2416 2.264005 TAGCGCTTCCCAAGACAAAA 57.736 45.000 18.68 0.00 0.00 2.44
1824 2417 2.083774 CATAGCGCTTCCCAAGACAAA 58.916 47.619 18.68 0.00 0.00 2.83
1825 2418 1.003118 ACATAGCGCTTCCCAAGACAA 59.997 47.619 18.68 0.00 0.00 3.18
1826 2419 0.613260 ACATAGCGCTTCCCAAGACA 59.387 50.000 18.68 0.00 0.00 3.41
1827 2420 1.739067 AACATAGCGCTTCCCAAGAC 58.261 50.000 18.68 0.00 0.00 3.01
1828 2421 2.235155 TGTAACATAGCGCTTCCCAAGA 59.765 45.455 18.68 0.00 0.00 3.02
1829 2422 2.609459 CTGTAACATAGCGCTTCCCAAG 59.391 50.000 18.68 0.00 0.00 3.61
1830 2423 2.027561 ACTGTAACATAGCGCTTCCCAA 60.028 45.455 18.68 0.00 0.00 4.12
1831 2424 1.553248 ACTGTAACATAGCGCTTCCCA 59.447 47.619 18.68 0.00 0.00 4.37
1832 2425 2.311124 ACTGTAACATAGCGCTTCCC 57.689 50.000 18.68 0.00 0.00 3.97
1833 2426 4.178540 TGTTACTGTAACATAGCGCTTCC 58.821 43.478 25.14 0.00 43.23 3.46
1864 2457 9.542462 GTGGCAAGTATTTAATGTGAGATAGTA 57.458 33.333 0.00 0.00 0.00 1.82
1865 2458 8.046708 TGTGGCAAGTATTTAATGTGAGATAGT 58.953 33.333 0.00 0.00 0.00 2.12
1866 2459 8.437360 TGTGGCAAGTATTTAATGTGAGATAG 57.563 34.615 0.00 0.00 0.00 2.08
1867 2460 8.978874 ATGTGGCAAGTATTTAATGTGAGATA 57.021 30.769 0.00 0.00 0.00 1.98
1868 2461 7.886629 ATGTGGCAAGTATTTAATGTGAGAT 57.113 32.000 0.00 0.00 0.00 2.75
1869 2462 8.800370 TTATGTGGCAAGTATTTAATGTGAGA 57.200 30.769 0.00 0.00 0.00 3.27
1870 2463 7.645340 GCTTATGTGGCAAGTATTTAATGTGAG 59.355 37.037 0.00 0.00 0.00 3.51
1871 2464 7.121907 TGCTTATGTGGCAAGTATTTAATGTGA 59.878 33.333 0.00 0.00 36.71 3.58
1872 2465 7.257003 TGCTTATGTGGCAAGTATTTAATGTG 58.743 34.615 0.00 0.00 36.71 3.21
1873 2466 7.403312 TGCTTATGTGGCAAGTATTTAATGT 57.597 32.000 0.00 0.00 36.71 2.71
1899 2492 6.799926 AACATAGCGCATTCCAAAATTTTT 57.200 29.167 11.47 0.00 0.00 1.94
1900 2493 7.096551 AGTAACATAGCGCATTCCAAAATTTT 58.903 30.769 11.47 0.00 0.00 1.82
1901 2494 6.630071 AGTAACATAGCGCATTCCAAAATTT 58.370 32.000 11.47 0.00 0.00 1.82
1902 2495 6.207691 AGTAACATAGCGCATTCCAAAATT 57.792 33.333 11.47 0.00 0.00 1.82
1903 2496 5.835113 AGTAACATAGCGCATTCCAAAAT 57.165 34.783 11.47 0.00 0.00 1.82
1904 2497 5.878116 ACTAGTAACATAGCGCATTCCAAAA 59.122 36.000 11.47 0.00 0.00 2.44
1905 2498 5.424757 ACTAGTAACATAGCGCATTCCAAA 58.575 37.500 11.47 0.00 0.00 3.28
1906 2499 5.018539 ACTAGTAACATAGCGCATTCCAA 57.981 39.130 11.47 0.00 0.00 3.53
1907 2500 4.665833 ACTAGTAACATAGCGCATTCCA 57.334 40.909 11.47 0.00 0.00 3.53
1908 2501 6.700520 ACTTAACTAGTAACATAGCGCATTCC 59.299 38.462 11.47 0.00 34.56 3.01
1909 2502 7.695869 ACTTAACTAGTAACATAGCGCATTC 57.304 36.000 11.47 0.00 34.56 2.67
1910 2503 9.028185 GTAACTTAACTAGTAACATAGCGCATT 57.972 33.333 11.47 0.20 35.54 3.56
1911 2504 8.411683 AGTAACTTAACTAGTAACATAGCGCAT 58.588 33.333 11.47 0.00 35.54 4.73
1912 2505 7.765307 AGTAACTTAACTAGTAACATAGCGCA 58.235 34.615 11.47 0.00 35.54 6.09
1913 2506 7.378194 GGAGTAACTTAACTAGTAACATAGCGC 59.622 40.741 0.00 0.00 35.54 5.92
1914 2507 7.859875 GGGAGTAACTTAACTAGTAACATAGCG 59.140 40.741 0.00 0.00 35.54 4.26
1915 2508 8.689972 TGGGAGTAACTTAACTAGTAACATAGC 58.310 37.037 0.00 0.00 35.54 2.97
1917 2510 9.759473 AGTGGGAGTAACTTAACTAGTAACATA 57.241 33.333 0.00 0.00 35.54 2.29
1918 2511 8.661752 AGTGGGAGTAACTTAACTAGTAACAT 57.338 34.615 0.00 0.00 35.54 2.71
1919 2512 9.759473 ATAGTGGGAGTAACTTAACTAGTAACA 57.241 33.333 0.00 0.00 35.54 2.41
1921 2514 9.979897 TCATAGTGGGAGTAACTTAACTAGTAA 57.020 33.333 0.00 0.00 35.54 2.24
1922 2515 9.401058 GTCATAGTGGGAGTAACTTAACTAGTA 57.599 37.037 0.00 0.00 35.54 1.82
1923 2516 8.114743 AGTCATAGTGGGAGTAACTTAACTAGT 58.885 37.037 0.00 0.00 39.32 2.57
1924 2517 8.522542 AGTCATAGTGGGAGTAACTTAACTAG 57.477 38.462 0.00 0.00 0.00 2.57
1925 2518 9.624373 CTAGTCATAGTGGGAGTAACTTAACTA 57.376 37.037 0.00 0.00 0.00 2.24
1926 2519 7.068470 GCTAGTCATAGTGGGAGTAACTTAACT 59.932 40.741 0.00 0.00 0.00 2.24
1927 2520 7.201835 GCTAGTCATAGTGGGAGTAACTTAAC 58.798 42.308 0.00 0.00 0.00 2.01
1928 2521 6.323225 GGCTAGTCATAGTGGGAGTAACTTAA 59.677 42.308 0.00 0.00 0.00 1.85
1929 2522 5.832060 GGCTAGTCATAGTGGGAGTAACTTA 59.168 44.000 0.00 0.00 0.00 2.24
1930 2523 4.650131 GGCTAGTCATAGTGGGAGTAACTT 59.350 45.833 0.00 0.00 0.00 2.66
1931 2524 4.079096 AGGCTAGTCATAGTGGGAGTAACT 60.079 45.833 0.00 0.00 0.00 2.24
1932 2525 4.216708 AGGCTAGTCATAGTGGGAGTAAC 58.783 47.826 0.00 0.00 0.00 2.50
1933 2526 4.537945 AGGCTAGTCATAGTGGGAGTAA 57.462 45.455 0.00 0.00 0.00 2.24
1934 2527 5.103813 TGTTAGGCTAGTCATAGTGGGAGTA 60.104 44.000 0.00 0.00 0.00 2.59
1935 2528 4.216708 GTTAGGCTAGTCATAGTGGGAGT 58.783 47.826 0.00 0.00 0.00 3.85
1936 2529 4.215908 TGTTAGGCTAGTCATAGTGGGAG 58.784 47.826 0.00 0.00 0.00 4.30
1937 2530 4.079385 TCTGTTAGGCTAGTCATAGTGGGA 60.079 45.833 0.00 0.00 0.00 4.37
1938 2531 4.215908 TCTGTTAGGCTAGTCATAGTGGG 58.784 47.826 0.00 0.00 0.00 4.61
1939 2532 5.593010 GTTCTGTTAGGCTAGTCATAGTGG 58.407 45.833 0.00 0.00 0.00 4.00
1940 2533 5.274718 CGTTCTGTTAGGCTAGTCATAGTG 58.725 45.833 0.00 0.00 0.00 2.74
1941 2534 4.338682 CCGTTCTGTTAGGCTAGTCATAGT 59.661 45.833 0.00 0.00 0.00 2.12
1942 2535 4.579340 TCCGTTCTGTTAGGCTAGTCATAG 59.421 45.833 0.00 0.00 0.00 2.23
1943 2536 4.529897 TCCGTTCTGTTAGGCTAGTCATA 58.470 43.478 0.00 0.00 0.00 2.15
1944 2537 3.362706 TCCGTTCTGTTAGGCTAGTCAT 58.637 45.455 0.00 0.00 0.00 3.06
1945 2538 2.799017 TCCGTTCTGTTAGGCTAGTCA 58.201 47.619 0.00 0.00 0.00 3.41
1946 2539 3.491104 CCATCCGTTCTGTTAGGCTAGTC 60.491 52.174 0.00 0.00 0.00 2.59
1947 2540 2.431057 CCATCCGTTCTGTTAGGCTAGT 59.569 50.000 0.00 0.00 0.00 2.57
1948 2541 2.431057 ACCATCCGTTCTGTTAGGCTAG 59.569 50.000 0.00 0.00 0.00 3.42
1949 2542 2.429610 GACCATCCGTTCTGTTAGGCTA 59.570 50.000 0.00 0.00 0.00 3.93
1950 2543 1.207329 GACCATCCGTTCTGTTAGGCT 59.793 52.381 0.00 0.00 0.00 4.58
1951 2544 1.066430 TGACCATCCGTTCTGTTAGGC 60.066 52.381 0.00 0.00 0.00 3.93
1952 2545 3.262420 CTTGACCATCCGTTCTGTTAGG 58.738 50.000 0.00 0.00 0.00 2.69
1953 2546 2.673368 GCTTGACCATCCGTTCTGTTAG 59.327 50.000 0.00 0.00 0.00 2.34
1954 2547 2.037902 TGCTTGACCATCCGTTCTGTTA 59.962 45.455 0.00 0.00 0.00 2.41
1955 2548 1.202758 TGCTTGACCATCCGTTCTGTT 60.203 47.619 0.00 0.00 0.00 3.16
1956 2549 0.396435 TGCTTGACCATCCGTTCTGT 59.604 50.000 0.00 0.00 0.00 3.41
1957 2550 1.742761 ATGCTTGACCATCCGTTCTG 58.257 50.000 0.00 0.00 0.00 3.02
1958 2551 3.845781 ATATGCTTGACCATCCGTTCT 57.154 42.857 0.00 0.00 0.00 3.01
1959 2552 3.548818 GCAATATGCTTGACCATCCGTTC 60.549 47.826 0.00 0.00 40.96 3.95
1960 2553 2.358898 GCAATATGCTTGACCATCCGTT 59.641 45.455 0.00 0.00 40.96 4.44
1961 2554 1.949525 GCAATATGCTTGACCATCCGT 59.050 47.619 0.00 0.00 40.96 4.69
1962 2555 1.948834 TGCAATATGCTTGACCATCCG 59.051 47.619 3.78 0.00 45.31 4.18
1971 2564 0.677288 ATGGCGCATGCAATATGCTT 59.323 45.000 19.57 1.96 45.31 3.91
1972 2565 0.242825 GATGGCGCATGCAATATGCT 59.757 50.000 19.57 0.00 45.31 3.79
1973 2566 0.734942 GGATGGCGCATGCAATATGC 60.735 55.000 19.57 12.25 45.35 3.14
1974 2567 0.108992 GGGATGGCGCATGCAATATG 60.109 55.000 19.57 1.33 45.35 1.78
1975 2568 1.252904 GGGGATGGCGCATGCAATAT 61.253 55.000 19.57 7.89 45.35 1.28
1976 2569 1.902918 GGGGATGGCGCATGCAATA 60.903 57.895 19.57 2.59 45.35 1.90
1977 2570 2.356173 TAGGGGATGGCGCATGCAAT 62.356 55.000 19.57 7.90 45.35 3.56
1978 2571 2.356173 ATAGGGGATGGCGCATGCAA 62.356 55.000 19.57 2.47 45.35 4.08
1979 2572 2.753009 GATAGGGGATGGCGCATGCA 62.753 60.000 19.57 0.00 45.35 3.96
1980 2573 2.034687 ATAGGGGATGGCGCATGC 59.965 61.111 10.83 7.91 41.71 4.06
1981 2574 1.377725 GGATAGGGGATGGCGCATG 60.378 63.158 10.83 0.00 0.00 4.06
1982 2575 1.136329 AAGGATAGGGGATGGCGCAT 61.136 55.000 10.83 0.00 0.00 4.73
1983 2576 1.770110 AAGGATAGGGGATGGCGCA 60.770 57.895 10.83 0.00 0.00 6.09
1984 2577 1.302832 CAAGGATAGGGGATGGCGC 60.303 63.158 0.00 0.00 0.00 6.53
1985 2578 0.250467 CACAAGGATAGGGGATGGCG 60.250 60.000 0.00 0.00 0.00 5.69
1986 2579 0.111253 CCACAAGGATAGGGGATGGC 59.889 60.000 0.00 0.00 36.89 4.40
1987 2580 0.773644 CCCACAAGGATAGGGGATGG 59.226 60.000 0.00 0.00 43.57 3.51
1992 2585 1.852965 ACATTCCCCACAAGGATAGGG 59.147 52.381 0.00 0.00 42.44 3.53
1993 2586 4.563580 CGATACATTCCCCACAAGGATAGG 60.564 50.000 0.00 0.00 38.24 2.57
1994 2587 4.563580 CCGATACATTCCCCACAAGGATAG 60.564 50.000 0.00 0.00 38.24 2.08
1995 2588 3.326588 CCGATACATTCCCCACAAGGATA 59.673 47.826 0.00 0.00 38.24 2.59
1996 2589 2.106511 CCGATACATTCCCCACAAGGAT 59.893 50.000 0.00 0.00 38.24 3.24
1997 2590 1.488812 CCGATACATTCCCCACAAGGA 59.511 52.381 0.00 0.00 38.24 3.36
1998 2591 1.476833 CCCGATACATTCCCCACAAGG 60.477 57.143 0.00 0.00 0.00 3.61
1999 2592 1.211949 ACCCGATACATTCCCCACAAG 59.788 52.381 0.00 0.00 0.00 3.16
2000 2593 1.065053 CACCCGATACATTCCCCACAA 60.065 52.381 0.00 0.00 0.00 3.33
2001 2594 0.544223 CACCCGATACATTCCCCACA 59.456 55.000 0.00 0.00 0.00 4.17
2002 2595 0.818040 GCACCCGATACATTCCCCAC 60.818 60.000 0.00 0.00 0.00 4.61
2003 2596 0.986019 AGCACCCGATACATTCCCCA 60.986 55.000 0.00 0.00 0.00 4.96
2004 2597 0.250338 GAGCACCCGATACATTCCCC 60.250 60.000 0.00 0.00 0.00 4.81
2005 2598 0.759346 AGAGCACCCGATACATTCCC 59.241 55.000 0.00 0.00 0.00 3.97
2006 2599 1.412710 TGAGAGCACCCGATACATTCC 59.587 52.381 0.00 0.00 0.00 3.01
2007 2600 2.474816 GTGAGAGCACCCGATACATTC 58.525 52.381 0.00 0.00 39.14 2.67
2008 2601 2.604046 GTGAGAGCACCCGATACATT 57.396 50.000 0.00 0.00 39.14 2.71
2018 2611 1.202698 ACACTCCAAAGGTGAGAGCAC 60.203 52.381 0.00 0.00 44.39 4.40
2019 2612 1.131638 ACACTCCAAAGGTGAGAGCA 58.868 50.000 0.00 0.00 38.01 4.26
2020 2613 2.262423 AACACTCCAAAGGTGAGAGC 57.738 50.000 0.00 0.00 38.01 4.09
2021 2614 3.248602 CGAAAACACTCCAAAGGTGAGAG 59.751 47.826 0.00 0.00 38.01 3.20
2022 2615 3.202906 CGAAAACACTCCAAAGGTGAGA 58.797 45.455 0.00 0.00 38.01 3.27
2023 2616 2.290641 CCGAAAACACTCCAAAGGTGAG 59.709 50.000 0.00 0.00 38.01 3.51
2024 2617 2.294074 CCGAAAACACTCCAAAGGTGA 58.706 47.619 0.00 0.00 38.01 4.02
2025 2618 2.021457 ACCGAAAACACTCCAAAGGTG 58.979 47.619 0.00 0.00 40.19 4.00
2026 2619 2.021457 CACCGAAAACACTCCAAAGGT 58.979 47.619 0.00 0.00 0.00 3.50
2027 2620 1.269051 GCACCGAAAACACTCCAAAGG 60.269 52.381 0.00 0.00 0.00 3.11
2028 2621 1.676006 AGCACCGAAAACACTCCAAAG 59.324 47.619 0.00 0.00 0.00 2.77
2029 2622 1.673920 GAGCACCGAAAACACTCCAAA 59.326 47.619 0.00 0.00 0.00 3.28
2030 2623 1.305201 GAGCACCGAAAACACTCCAA 58.695 50.000 0.00 0.00 0.00 3.53
2031 2624 0.534203 GGAGCACCGAAAACACTCCA 60.534 55.000 2.54 0.00 45.16 3.86
2032 2625 0.534203 TGGAGCACCGAAAACACTCC 60.534 55.000 0.00 0.00 45.87 3.85
2033 2626 0.586802 GTGGAGCACCGAAAACACTC 59.413 55.000 0.00 0.00 39.42 3.51
2034 2627 1.157870 CGTGGAGCACCGAAAACACT 61.158 55.000 0.00 0.00 39.42 3.55
2035 2628 1.278637 CGTGGAGCACCGAAAACAC 59.721 57.895 0.00 0.00 39.42 3.32
2036 2629 3.725819 CGTGGAGCACCGAAAACA 58.274 55.556 0.00 0.00 39.42 2.83
2067 2660 9.737427 TGCTAGATTTGTTTCAAAATTTTACGA 57.263 25.926 2.44 0.00 29.89 3.43
2068 2661 9.777843 GTGCTAGATTTGTTTCAAAATTTTACG 57.222 29.630 2.44 0.00 29.89 3.18
2073 2666 9.545105 TGAATGTGCTAGATTTGTTTCAAAATT 57.455 25.926 0.00 0.00 29.89 1.82
2074 2667 9.715121 ATGAATGTGCTAGATTTGTTTCAAAAT 57.285 25.926 0.00 0.00 32.43 1.82
2080 2673 9.979578 TGTTTTATGAATGTGCTAGATTTGTTT 57.020 25.926 0.00 0.00 0.00 2.83
2082 2675 9.793252 GATGTTTTATGAATGTGCTAGATTTGT 57.207 29.630 0.00 0.00 0.00 2.83
2083 2676 9.791820 TGATGTTTTATGAATGTGCTAGATTTG 57.208 29.630 0.00 0.00 0.00 2.32
2086 2679 9.961265 CATTGATGTTTTATGAATGTGCTAGAT 57.039 29.630 0.00 0.00 0.00 1.98
2087 2680 8.959548 ACATTGATGTTTTATGAATGTGCTAGA 58.040 29.630 4.37 0.00 37.90 2.43
2090 2683 9.524106 CATACATTGATGTTTTATGAATGTGCT 57.476 29.630 12.74 1.23 41.97 4.40
2091 2684 9.304731 ACATACATTGATGTTTTATGAATGTGC 57.695 29.630 12.74 0.00 41.97 4.57
2097 2690 9.838975 GTGACAACATACATTGATGTTTTATGA 57.161 29.630 10.68 0.00 45.65 2.15
2098 2691 9.623350 TGTGACAACATACATTGATGTTTTATG 57.377 29.630 1.46 3.34 45.65 1.90
2101 2694 8.939201 TTTGTGACAACATACATTGATGTTTT 57.061 26.923 0.00 6.22 45.65 2.43
2102 2695 8.939201 TTTTGTGACAACATACATTGATGTTT 57.061 26.923 0.00 0.00 45.65 2.83
2104 2697 9.545105 AAATTTTGTGACAACATACATTGATGT 57.455 25.926 0.00 1.84 43.33 3.06
2106 2699 9.761504 TGAAATTTTGTGACAACATACATTGAT 57.238 25.926 0.00 0.00 35.83 2.57
2107 2700 9.591792 TTGAAATTTTGTGACAACATACATTGA 57.408 25.926 0.00 0.00 35.83 2.57
2111 2704 9.591792 TGATTTGAAATTTTGTGACAACATACA 57.408 25.926 0.00 0.00 35.83 2.29
2129 2722 9.719279 GAGCAATGTTTTGAATTTTGATTTGAA 57.281 25.926 0.00 0.00 34.60 2.69
2130 2723 8.063038 CGAGCAATGTTTTGAATTTTGATTTGA 58.937 29.630 0.00 0.00 34.60 2.69
2131 2724 8.063038 TCGAGCAATGTTTTGAATTTTGATTTG 58.937 29.630 0.00 0.00 34.60 2.32
2132 2725 8.140677 TCGAGCAATGTTTTGAATTTTGATTT 57.859 26.923 0.00 0.00 34.60 2.17
2133 2726 7.652909 TCTCGAGCAATGTTTTGAATTTTGATT 59.347 29.630 7.81 0.00 34.60 2.57
2134 2727 7.147312 TCTCGAGCAATGTTTTGAATTTTGAT 58.853 30.769 7.81 0.00 34.60 2.57
2135 2728 6.502652 TCTCGAGCAATGTTTTGAATTTTGA 58.497 32.000 7.81 0.00 34.60 2.69
2136 2729 6.752335 TCTCGAGCAATGTTTTGAATTTTG 57.248 33.333 7.81 0.00 34.60 2.44
2137 2730 8.081633 TGTATCTCGAGCAATGTTTTGAATTTT 58.918 29.630 7.81 0.00 34.60 1.82
2138 2731 7.592938 TGTATCTCGAGCAATGTTTTGAATTT 58.407 30.769 7.81 0.00 34.60 1.82
2139 2732 7.144722 TGTATCTCGAGCAATGTTTTGAATT 57.855 32.000 7.81 0.00 34.60 2.17
2140 2733 6.741992 TGTATCTCGAGCAATGTTTTGAAT 57.258 33.333 7.81 0.00 34.60 2.57
2141 2734 6.552859 TTGTATCTCGAGCAATGTTTTGAA 57.447 33.333 7.81 0.00 34.60 2.69
2142 2735 6.552859 TTTGTATCTCGAGCAATGTTTTGA 57.447 33.333 7.81 0.00 34.60 2.69
2143 2736 7.621832 TTTTTGTATCTCGAGCAATGTTTTG 57.378 32.000 7.81 0.00 35.85 2.44
2164 2757 9.413048 TCAAATTAACGTCAGTTTTGTCTTTTT 57.587 25.926 0.00 0.00 41.49 1.94
2165 2758 8.973835 TCAAATTAACGTCAGTTTTGTCTTTT 57.026 26.923 0.00 0.00 41.49 2.27
2172 2765 9.341899 GCTCATTATCAAATTAACGTCAGTTTT 57.658 29.630 0.00 0.00 41.49 2.43
2173 2766 7.968405 GGCTCATTATCAAATTAACGTCAGTTT 59.032 33.333 0.00 0.00 41.49 2.66
2174 2767 7.120579 TGGCTCATTATCAAATTAACGTCAGTT 59.879 33.333 0.00 0.00 43.95 3.16
2175 2768 6.597672 TGGCTCATTATCAAATTAACGTCAGT 59.402 34.615 0.00 0.00 0.00 3.41
2176 2769 7.015226 TGGCTCATTATCAAATTAACGTCAG 57.985 36.000 0.00 0.00 0.00 3.51
2177 2770 6.993786 TGGCTCATTATCAAATTAACGTCA 57.006 33.333 0.00 0.00 0.00 4.35
2178 2771 8.856490 ATTTGGCTCATTATCAAATTAACGTC 57.144 30.769 0.00 0.00 37.71 4.34
2179 2772 8.686334 AGATTTGGCTCATTATCAAATTAACGT 58.314 29.630 0.00 0.00 40.05 3.99
2184 2777 9.538508 GCTTTAGATTTGGCTCATTATCAAATT 57.461 29.630 0.00 0.00 40.05 1.82
2185 2778 8.146412 GGCTTTAGATTTGGCTCATTATCAAAT 58.854 33.333 0.00 0.00 41.87 2.32
2186 2779 7.123997 TGGCTTTAGATTTGGCTCATTATCAAA 59.876 33.333 0.00 0.00 35.30 2.69
2187 2780 6.606796 TGGCTTTAGATTTGGCTCATTATCAA 59.393 34.615 0.00 0.00 0.00 2.57
2188 2781 6.128486 TGGCTTTAGATTTGGCTCATTATCA 58.872 36.000 0.00 0.00 0.00 2.15
2189 2782 6.639632 TGGCTTTAGATTTGGCTCATTATC 57.360 37.500 0.00 0.00 0.00 1.75
2190 2783 6.608808 AGTTGGCTTTAGATTTGGCTCATTAT 59.391 34.615 0.00 0.00 0.00 1.28
2191 2784 5.951747 AGTTGGCTTTAGATTTGGCTCATTA 59.048 36.000 0.00 0.00 0.00 1.90
2192 2785 4.774200 AGTTGGCTTTAGATTTGGCTCATT 59.226 37.500 0.00 0.00 0.00 2.57
2193 2786 4.347607 AGTTGGCTTTAGATTTGGCTCAT 58.652 39.130 0.00 0.00 0.00 2.90
2194 2787 3.766545 AGTTGGCTTTAGATTTGGCTCA 58.233 40.909 0.00 0.00 0.00 4.26
2195 2788 4.790765 AAGTTGGCTTTAGATTTGGCTC 57.209 40.909 0.00 0.00 0.00 4.70
2196 2789 5.716703 ACATAAGTTGGCTTTAGATTTGGCT 59.283 36.000 0.00 0.00 36.22 4.75
2197 2790 5.965922 ACATAAGTTGGCTTTAGATTTGGC 58.034 37.500 0.00 0.00 36.22 4.52
2198 2791 9.520204 CATAACATAAGTTGGCTTTAGATTTGG 57.480 33.333 0.00 0.00 38.69 3.28
2203 2796 9.595823 GAGTACATAACATAAGTTGGCTTTAGA 57.404 33.333 0.00 0.00 38.69 2.10
2204 2797 8.827677 GGAGTACATAACATAAGTTGGCTTTAG 58.172 37.037 0.00 0.00 38.69 1.85
2205 2798 7.771826 GGGAGTACATAACATAAGTTGGCTTTA 59.228 37.037 0.00 0.00 38.69 1.85
2206 2799 6.602009 GGGAGTACATAACATAAGTTGGCTTT 59.398 38.462 0.00 0.00 38.69 3.51
2207 2800 6.120220 GGGAGTACATAACATAAGTTGGCTT 58.880 40.000 0.00 0.00 38.69 4.35
2208 2801 5.397559 GGGGAGTACATAACATAAGTTGGCT 60.398 44.000 0.00 0.00 38.69 4.75
2209 2802 4.820173 GGGGAGTACATAACATAAGTTGGC 59.180 45.833 0.00 0.00 38.69 4.52
2210 2803 6.248569 AGGGGAGTACATAACATAAGTTGG 57.751 41.667 0.00 0.00 38.69 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.