Multiple sequence alignment - TraesCS5A01G044700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G044700 chr5A 100.000 2312 0 0 1 2312 40910125 40912436 0.000000e+00 4270
1 TraesCS5A01G044700 chr5A 90.110 364 31 2 995 1355 40684716 40685077 3.480000e-128 468
2 TraesCS5A01G044700 chr5B 89.892 1019 56 27 510 1520 54830667 54831646 0.000000e+00 1267
3 TraesCS5A01G044700 chr5B 81.984 766 94 27 582 1338 54508307 54509037 5.460000e-171 610
4 TraesCS5A01G044700 chr5B 92.661 327 24 0 989 1315 54860263 54860589 2.690000e-129 472
5 TraesCS5A01G044700 chr5B 83.905 379 43 10 43 413 54829488 54829856 1.700000e-91 346
6 TraesCS5A01G044700 chr5D 91.050 838 47 17 634 1454 51846880 51847706 0.000000e+00 1107
7 TraesCS5A01G044700 chr5D 89.259 661 43 13 1 649 51846220 51846864 0.000000e+00 802
8 TraesCS5A01G044700 chr5D 81.369 789 85 38 541 1316 51851891 51852630 9.200000e-164 586
9 TraesCS5A01G044700 chr5D 80.964 788 84 38 541 1315 51674883 51675617 4.310000e-157 564
10 TraesCS5A01G044700 chr5D 92.000 325 26 0 989 1313 51861007 51861331 7.530000e-125 457
11 TraesCS5A01G044700 chr5D 90.407 344 29 2 995 1338 51637517 51637856 1.260000e-122 449
12 TraesCS5A01G044700 chr5D 86.740 181 18 5 1559 1734 51847724 51847903 1.810000e-46 196
13 TraesCS5A01G044700 chr5D 91.262 103 5 3 2188 2289 530907813 530907714 1.110000e-28 137
14 TraesCS5A01G044700 chr4D 86.713 286 28 5 33 314 14398769 14398490 2.230000e-80 309
15 TraesCS5A01G044700 chr4D 87.259 259 22 7 88 345 15148855 15148607 3.760000e-73 285
16 TraesCS5A01G044700 chr4D 82.440 336 30 13 12 334 14929166 14929485 1.360000e-67 267
17 TraesCS5A01G044700 chr2A 84.790 309 34 6 33 334 196314898 196314596 4.830000e-77 298
18 TraesCS5A01G044700 chr4A 84.466 309 35 7 33 334 456398669 456398367 2.250000e-75 292
19 TraesCS5A01G044700 chr4A 83.636 330 35 7 12 334 586672393 586672076 2.250000e-75 292
20 TraesCS5A01G044700 chr7A 96.800 125 2 1 2188 2312 36329772 36329650 8.370000e-50 207
21 TraesCS5A01G044700 chr7A 93.651 126 5 2 2188 2312 679856394 679856271 3.920000e-43 185
22 TraesCS5A01G044700 chr2D 93.548 124 5 2 2188 2310 91356021 91356142 5.070000e-42 182
23 TraesCS5A01G044700 chr2D 92.233 103 5 2 2188 2289 295572644 295572544 2.390000e-30 143
24 TraesCS5A01G044700 chr2D 90.291 103 7 2 2188 2289 229819917 229819817 5.180000e-27 132
25 TraesCS5A01G044700 chr2B 90.476 126 10 1 2187 2312 269381350 269381227 5.110000e-37 165
26 TraesCS5A01G044700 chr6D 91.262 103 6 2 2188 2289 455627782 455627882 1.110000e-28 137
27 TraesCS5A01G044700 chr3D 90.291 103 7 2 2188 2289 364956720 364956820 5.180000e-27 132


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G044700 chr5A 40910125 40912436 2311 False 4270.00 4270 100.0000 1 2312 1 chr5A.!!$F2 2311
1 TraesCS5A01G044700 chr5B 54829488 54831646 2158 False 806.50 1267 86.8985 43 1520 2 chr5B.!!$F3 1477
2 TraesCS5A01G044700 chr5B 54508307 54509037 730 False 610.00 610 81.9840 582 1338 1 chr5B.!!$F1 756
3 TraesCS5A01G044700 chr5D 51846220 51852630 6410 False 672.75 1107 87.1045 1 1734 4 chr5D.!!$F4 1733
4 TraesCS5A01G044700 chr5D 51674883 51675617 734 False 564.00 564 80.9640 541 1315 1 chr5D.!!$F2 774

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
625 1358 1.076438 TCAGAGGTCCTGAGTCCTGA 58.924 55.0 0.0 0.0 46.38 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1643 2436 0.039617 CGATGCAGACCGAGATCCTC 60.04 60.0 0.0 0.0 0.0 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 4.448537 TTCTGAACATTTAAATGCCCCG 57.551 40.909 24.82 14.20 40.04 5.73
60 61 4.142182 CCGCATAAACACATGGGAAGAAAT 60.142 41.667 0.00 0.00 40.34 2.17
61 62 5.410067 CGCATAAACACATGGGAAGAAATT 58.590 37.500 0.00 0.00 40.34 1.82
117 123 4.458989 TGTTGATGGTTCATTAAGGACTGC 59.541 41.667 0.00 0.00 0.00 4.40
150 160 8.623030 GCTCGATAGGGTTAGGTATTCTATTAG 58.377 40.741 0.00 0.00 40.37 1.73
172 183 5.178797 AGTATGTCTTTTCCCTCGATGTTG 58.821 41.667 0.00 0.00 0.00 3.33
173 184 3.485463 TGTCTTTTCCCTCGATGTTGT 57.515 42.857 0.00 0.00 0.00 3.32
174 185 4.610605 TGTCTTTTCCCTCGATGTTGTA 57.389 40.909 0.00 0.00 0.00 2.41
176 187 4.994852 TGTCTTTTCCCTCGATGTTGTAAG 59.005 41.667 0.00 0.00 0.00 2.34
177 188 4.995487 GTCTTTTCCCTCGATGTTGTAAGT 59.005 41.667 0.00 0.00 0.00 2.24
180 191 5.682943 TTTCCCTCGATGTTGTAAGTTTG 57.317 39.130 0.00 0.00 0.00 2.93
181 192 4.345859 TCCCTCGATGTTGTAAGTTTGT 57.654 40.909 0.00 0.00 0.00 2.83
182 193 5.471556 TCCCTCGATGTTGTAAGTTTGTA 57.528 39.130 0.00 0.00 0.00 2.41
183 194 5.232463 TCCCTCGATGTTGTAAGTTTGTAC 58.768 41.667 0.00 0.00 0.00 2.90
188 199 7.148853 CCTCGATGTTGTAAGTTTGTACTGTAC 60.149 40.741 10.98 10.98 34.01 2.90
196 207 4.522722 AGTTTGTACTGTACTCTCCAGC 57.477 45.455 17.98 3.26 33.09 4.85
241 253 3.505680 CCAAGCTTGGTGTATGTTTGCTA 59.494 43.478 33.46 0.00 43.43 3.49
243 255 2.749621 AGCTTGGTGTATGTTTGCTAGC 59.250 45.455 8.10 8.10 0.00 3.42
258 276 4.871600 TTGCTAGCTTGGCAATGAGCAAA 61.872 43.478 27.39 17.38 44.49 3.68
292 310 9.983024 TTATTTATTTTCTCCAACTGGTCCATA 57.017 29.630 0.00 0.00 36.34 2.74
334 352 4.265073 AGTGACATCTAAATCCTTGTGGC 58.735 43.478 0.00 0.00 0.00 5.01
391 409 6.183360 TGCCATCTTTAATCTGCATCGAAATT 60.183 34.615 0.00 0.00 0.00 1.82
393 411 7.096312 GCCATCTTTAATCTGCATCGAAATTTC 60.096 37.037 8.20 8.20 0.00 2.17
403 421 9.696917 ATCTGCATCGAAATTTCTAAACTTTTT 57.303 25.926 15.92 0.00 0.00 1.94
437 460 6.688637 ACGGAAGCAAAACTAAGTAACTTT 57.311 33.333 0.00 0.00 0.00 2.66
440 463 8.340443 ACGGAAGCAAAACTAAGTAACTTTAAG 58.660 33.333 0.00 0.00 0.00 1.85
466 492 8.762481 ATTGGTCTAAACTTTTAAGGAGTGTT 57.238 30.769 0.00 0.00 0.00 3.32
467 493 9.856162 ATTGGTCTAAACTTTTAAGGAGTGTTA 57.144 29.630 0.00 0.00 0.00 2.41
469 495 7.716560 TGGTCTAAACTTTTAAGGAGTGTTACC 59.283 37.037 0.00 0.00 0.00 2.85
470 496 7.095481 GGTCTAAACTTTTAAGGAGTGTTACCG 60.095 40.741 0.00 0.00 0.00 4.02
472 498 8.203485 TCTAAACTTTTAAGGAGTGTTACCGAA 58.797 33.333 0.00 0.00 0.00 4.30
473 499 6.856135 AACTTTTAAGGAGTGTTACCGAAG 57.144 37.500 0.00 0.00 0.00 3.79
474 500 5.922053 ACTTTTAAGGAGTGTTACCGAAGT 58.078 37.500 0.00 0.00 0.00 3.01
507 1223 2.311243 ACGGAGGGAGTAGAACCTTACT 59.689 50.000 0.00 0.00 37.18 2.24
527 1258 9.868277 CCTTACTTAGATTCCATATGATCTCAC 57.132 37.037 3.65 0.00 0.00 3.51
558 1289 3.286353 TCTGCATCTCTCTCGATGTCTT 58.714 45.455 0.00 0.00 42.14 3.01
612 1345 9.936759 AGAAGAGAACTATTAAAAAGTCAGAGG 57.063 33.333 0.00 0.00 0.00 3.69
616 1349 8.208575 AGAACTATTAAAAAGTCAGAGGTCCT 57.791 34.615 0.00 0.00 0.00 3.85
624 1357 3.679935 TCAGAGGTCCTGAGTCCTG 57.320 57.895 0.00 0.00 46.38 3.86
625 1358 1.076438 TCAGAGGTCCTGAGTCCTGA 58.924 55.000 0.00 0.00 46.38 3.86
664 1428 3.232662 CAATCCATTGTATCATGGCCCA 58.767 45.455 0.00 0.00 37.84 5.36
672 1438 6.392354 CATTGTATCATGGCCCAATTGATAC 58.608 40.000 22.42 22.42 46.39 2.24
781 1556 5.661458 CTCGGCATATATTTATCCGAACCT 58.339 41.667 13.03 0.00 46.85 3.50
782 1557 6.045072 TCGGCATATATTTATCCGAACCTT 57.955 37.500 10.81 0.00 45.03 3.50
921 1699 3.182572 GCACAAGTCAAAGACTCGTACAG 59.817 47.826 0.00 0.00 42.59 2.74
945 1724 3.931578 AGCACTGAAGACTTGTACATCC 58.068 45.455 0.00 0.00 0.00 3.51
967 1746 6.329496 TCCACAACATTGTTCTTTTGAGTTC 58.671 36.000 0.00 0.00 39.91 3.01
975 1754 4.004314 TGTTCTTTTGAGTTCGTGGTGAA 58.996 39.130 0.00 0.00 0.00 3.18
976 1755 4.094294 TGTTCTTTTGAGTTCGTGGTGAAG 59.906 41.667 0.00 0.00 37.23 3.02
977 1756 4.131649 TCTTTTGAGTTCGTGGTGAAGA 57.868 40.909 0.00 0.00 37.23 2.87
993 1772 2.233922 TGAAGAAGATCAAGGTCGGGTC 59.766 50.000 0.00 0.00 0.00 4.46
1140 1919 2.134933 GGATCTGGACGAGGACCCC 61.135 68.421 0.00 0.00 0.00 4.95
1313 2092 1.555075 AGGTGCTGTATGGGTGTAGTG 59.445 52.381 0.00 0.00 0.00 2.74
1314 2093 1.369625 GTGCTGTATGGGTGTAGTGC 58.630 55.000 0.00 0.00 0.00 4.40
1315 2094 0.108377 TGCTGTATGGGTGTAGTGCG 60.108 55.000 0.00 0.00 0.00 5.34
1316 2095 1.429148 GCTGTATGGGTGTAGTGCGC 61.429 60.000 0.00 0.00 0.00 6.09
1339 2118 2.038033 CGGGAGAGGGTTTTGTTGTAGA 59.962 50.000 0.00 0.00 0.00 2.59
1341 2120 4.010349 GGGAGAGGGTTTTGTTGTAGATG 58.990 47.826 0.00 0.00 0.00 2.90
1343 2131 3.074412 AGAGGGTTTTGTTGTAGATGCG 58.926 45.455 0.00 0.00 0.00 4.73
1344 2132 2.812011 GAGGGTTTTGTTGTAGATGCGT 59.188 45.455 0.00 0.00 0.00 5.24
1361 2149 3.917329 GCGTATGCAGTGGATAGTAGA 57.083 47.619 4.35 0.00 42.15 2.59
1362 2150 4.238761 GCGTATGCAGTGGATAGTAGAA 57.761 45.455 4.35 0.00 42.15 2.10
1364 2152 5.047847 GCGTATGCAGTGGATAGTAGAAAA 58.952 41.667 4.35 0.00 42.15 2.29
1365 2153 5.050972 GCGTATGCAGTGGATAGTAGAAAAC 60.051 44.000 4.35 0.00 42.15 2.43
1366 2154 5.462398 CGTATGCAGTGGATAGTAGAAAACC 59.538 44.000 4.35 0.00 0.00 3.27
1369 2157 4.020928 TGCAGTGGATAGTAGAAAACCGAA 60.021 41.667 0.00 0.00 0.00 4.30
1372 2160 6.620089 GCAGTGGATAGTAGAAAACCGAAAAC 60.620 42.308 0.00 0.00 0.00 2.43
1373 2161 5.636543 AGTGGATAGTAGAAAACCGAAAACG 59.363 40.000 0.00 0.00 0.00 3.60
1379 2167 6.457851 AGTAGAAAACCGAAAACGATGTAC 57.542 37.500 0.00 0.00 0.00 2.90
1380 2168 5.984926 AGTAGAAAACCGAAAACGATGTACA 59.015 36.000 0.00 0.00 0.00 2.90
1381 2169 5.086888 AGAAAACCGAAAACGATGTACAC 57.913 39.130 0.00 0.00 0.00 2.90
1382 2170 4.812626 AGAAAACCGAAAACGATGTACACT 59.187 37.500 0.00 0.00 0.00 3.55
1392 2180 1.773525 CGATGTACACTCACGTATGCG 59.226 52.381 0.00 0.19 44.93 4.73
1393 2181 1.517276 GATGTACACTCACGTATGCGC 59.483 52.381 0.00 0.00 42.83 6.09
1395 2183 1.336056 TGTACACTCACGTATGCGCAA 60.336 47.619 17.11 0.11 42.83 4.85
1399 2187 1.059369 CTCACGTATGCGCAAGTGC 59.941 57.895 27.86 12.76 42.83 4.40
1412 2200 2.349249 CGCAAGTGCTCTGTTTTCTCTG 60.349 50.000 1.21 0.00 39.32 3.35
1422 2210 4.887748 TCTGTTTTCTCTGTCAGGTGATC 58.112 43.478 0.00 0.00 0.00 2.92
1425 2213 6.211384 TCTGTTTTCTCTGTCAGGTGATCATA 59.789 38.462 0.00 0.00 0.00 2.15
1426 2214 6.950842 TGTTTTCTCTGTCAGGTGATCATAT 58.049 36.000 0.00 0.00 0.00 1.78
1428 2216 8.708378 TGTTTTCTCTGTCAGGTGATCATATAT 58.292 33.333 0.00 0.00 0.00 0.86
1433 2222 9.987726 TCTCTGTCAGGTGATCATATATAAGAT 57.012 33.333 0.00 0.10 0.00 2.40
1439 2228 9.774071 TCAGGTGATCATATATAAGATGAAGGA 57.226 33.333 5.22 0.00 36.90 3.36
1466 2255 6.189677 CCATGCAGGTCGTTTTATTTTAGA 57.810 37.500 0.00 0.00 0.00 2.10
1502 2291 4.453751 AGTACGATTCTACTCCCTCAGTC 58.546 47.826 0.00 0.00 36.43 3.51
1504 2293 2.242708 ACGATTCTACTCCCTCAGTCCT 59.757 50.000 0.00 0.00 36.43 3.85
1507 2296 4.479158 GATTCTACTCCCTCAGTCCTGAT 58.521 47.826 0.00 0.00 39.13 2.90
1513 2302 4.027437 ACTCCCTCAGTCCTGATTTACTC 58.973 47.826 0.00 0.00 39.13 2.59
1520 2309 2.159366 AGTCCTGATTTACTCGTCGCAG 60.159 50.000 0.00 0.00 0.00 5.18
1521 2310 2.089201 TCCTGATTTACTCGTCGCAGA 58.911 47.619 0.00 0.00 0.00 4.26
1522 2311 2.490509 TCCTGATTTACTCGTCGCAGAA 59.509 45.455 0.00 0.00 39.69 3.02
1523 2312 3.130516 TCCTGATTTACTCGTCGCAGAAT 59.869 43.478 0.00 0.00 39.69 2.40
1524 2313 3.243877 CCTGATTTACTCGTCGCAGAATG 59.756 47.826 0.00 0.00 39.69 2.67
1525 2314 4.104696 TGATTTACTCGTCGCAGAATGA 57.895 40.909 0.00 0.00 39.69 2.57
1526 2315 4.490743 TGATTTACTCGTCGCAGAATGAA 58.509 39.130 0.00 0.00 39.69 2.57
1527 2316 5.109210 TGATTTACTCGTCGCAGAATGAAT 58.891 37.500 0.00 0.00 39.69 2.57
1528 2317 6.270064 TGATTTACTCGTCGCAGAATGAATA 58.730 36.000 0.00 0.00 39.69 1.75
1529 2318 6.417930 TGATTTACTCGTCGCAGAATGAATAG 59.582 38.462 0.00 0.00 39.69 1.73
1530 2319 5.494632 TTACTCGTCGCAGAATGAATAGA 57.505 39.130 0.00 0.00 39.69 1.98
1531 2320 4.371855 ACTCGTCGCAGAATGAATAGAA 57.628 40.909 0.00 0.00 39.69 2.10
1532 2321 4.106197 ACTCGTCGCAGAATGAATAGAAC 58.894 43.478 0.00 0.00 39.69 3.01
1533 2322 3.105937 TCGTCGCAGAATGAATAGAACG 58.894 45.455 0.00 0.00 39.69 3.95
1534 2323 3.105937 CGTCGCAGAATGAATAGAACGA 58.894 45.455 0.00 0.00 39.69 3.85
1535 2324 3.061797 CGTCGCAGAATGAATAGAACGAC 60.062 47.826 0.00 0.00 43.69 4.34
1536 2325 3.061797 GTCGCAGAATGAATAGAACGACG 60.062 47.826 0.00 0.00 39.69 5.12
1537 2326 3.105937 CGCAGAATGAATAGAACGACGA 58.894 45.455 0.00 0.00 39.69 4.20
1538 2327 3.178618 CGCAGAATGAATAGAACGACGAG 59.821 47.826 0.00 0.00 39.69 4.18
1539 2328 4.106197 GCAGAATGAATAGAACGACGAGT 58.894 43.478 0.00 0.00 39.69 4.18
1540 2329 5.271625 GCAGAATGAATAGAACGACGAGTA 58.728 41.667 0.00 0.00 39.69 2.59
1541 2330 5.742453 GCAGAATGAATAGAACGACGAGTAA 59.258 40.000 0.00 0.00 39.69 2.24
1542 2331 6.418226 GCAGAATGAATAGAACGACGAGTAAT 59.582 38.462 0.00 0.00 39.69 1.89
1543 2332 7.043325 GCAGAATGAATAGAACGACGAGTAATT 60.043 37.037 0.00 0.00 39.69 1.40
1544 2333 8.473016 CAGAATGAATAGAACGACGAGTAATTC 58.527 37.037 0.00 6.36 39.69 2.17
1545 2334 7.648510 AGAATGAATAGAACGACGAGTAATTCC 59.351 37.037 0.00 0.00 31.22 3.01
1546 2335 5.268544 TGAATAGAACGACGAGTAATTCCG 58.731 41.667 0.00 0.00 31.22 4.30
1547 2336 2.556534 AGAACGACGAGTAATTCCGG 57.443 50.000 0.00 0.00 0.00 5.14
1548 2337 2.086869 AGAACGACGAGTAATTCCGGA 58.913 47.619 0.00 0.00 0.00 5.14
1549 2338 2.686915 AGAACGACGAGTAATTCCGGAT 59.313 45.455 4.15 0.00 0.00 4.18
1550 2339 2.486951 ACGACGAGTAATTCCGGATG 57.513 50.000 4.15 0.00 0.00 3.51
1551 2340 2.019249 ACGACGAGTAATTCCGGATGA 58.981 47.619 4.15 0.00 0.00 2.92
1552 2341 2.424601 ACGACGAGTAATTCCGGATGAA 59.575 45.455 4.15 0.00 37.38 2.57
1553 2342 3.043586 CGACGAGTAATTCCGGATGAAG 58.956 50.000 4.15 0.00 36.14 3.02
1554 2343 3.381949 GACGAGTAATTCCGGATGAAGG 58.618 50.000 4.15 0.00 36.14 3.46
1555 2344 2.102588 ACGAGTAATTCCGGATGAAGGG 59.897 50.000 4.15 0.00 36.14 3.95
1556 2345 2.364324 CGAGTAATTCCGGATGAAGGGA 59.636 50.000 4.15 0.00 36.14 4.20
1557 2346 3.553096 CGAGTAATTCCGGATGAAGGGAG 60.553 52.174 4.15 0.00 36.14 4.30
1562 2351 2.767644 TCCGGATGAAGGGAGTATGA 57.232 50.000 0.00 0.00 0.00 2.15
1576 2365 5.046520 AGGGAGTATGACTTAAGTTGTGACC 60.047 44.000 10.02 9.31 0.00 4.02
1578 2367 5.336213 GGAGTATGACTTAAGTTGTGACCGA 60.336 44.000 10.02 0.00 0.00 4.69
1584 2377 4.448210 ACTTAAGTTGTGACCGACATGTT 58.552 39.130 1.12 0.00 33.40 2.71
1596 2389 1.195448 CGACATGTTGACCAGCTTGAC 59.805 52.381 7.36 0.00 0.00 3.18
1598 2391 1.229428 CATGTTGACCAGCTTGACGT 58.771 50.000 0.00 0.00 0.00 4.34
1599 2392 1.069703 CATGTTGACCAGCTTGACGTG 60.070 52.381 0.00 0.00 0.00 4.49
1602 2395 3.050275 GACCAGCTTGACGTGGGC 61.050 66.667 0.00 0.00 38.25 5.36
1616 2409 2.403348 TGGGCCCCACATGTCATTA 58.597 52.632 22.27 0.00 0.00 1.90
1626 2419 6.129179 CCCCACATGTCATTAATCCTAAAGT 58.871 40.000 0.00 0.00 0.00 2.66
1628 2421 6.263168 CCCACATGTCATTAATCCTAAAGTCC 59.737 42.308 0.00 0.00 0.00 3.85
1643 2436 8.792830 TCCTAAAGTCCAGTGATTTAAATCAG 57.207 34.615 27.26 17.74 45.38 2.90
1661 2454 3.883997 GAGGATCTCGGTCTGCATC 57.116 57.895 0.00 0.00 0.00 3.91
1663 2456 0.466372 AGGATCTCGGTCTGCATCGA 60.466 55.000 6.74 6.74 0.00 3.59
1681 2474 4.177165 TCGAAGATGCCTTTGTAACGTA 57.823 40.909 0.00 0.00 35.67 3.57
1768 2561 5.309323 CCTTCGTCAAGGCATTTTATTCA 57.691 39.130 0.00 0.00 43.14 2.57
1769 2562 5.894807 CCTTCGTCAAGGCATTTTATTCAT 58.105 37.500 0.00 0.00 43.14 2.57
1770 2563 5.973565 CCTTCGTCAAGGCATTTTATTCATC 59.026 40.000 0.00 0.00 43.14 2.92
1772 2565 6.363577 TCGTCAAGGCATTTTATTCATCTC 57.636 37.500 0.00 0.00 0.00 2.75
1773 2566 5.006649 TCGTCAAGGCATTTTATTCATCTCG 59.993 40.000 0.00 0.00 0.00 4.04
1774 2567 5.514279 GTCAAGGCATTTTATTCATCTCGG 58.486 41.667 0.00 0.00 0.00 4.63
1775 2568 4.580167 TCAAGGCATTTTATTCATCTCGGG 59.420 41.667 0.00 0.00 0.00 5.14
1776 2569 3.490348 AGGCATTTTATTCATCTCGGGG 58.510 45.455 0.00 0.00 0.00 5.73
1777 2570 2.558359 GGCATTTTATTCATCTCGGGGG 59.442 50.000 0.00 0.00 0.00 5.40
1794 2587 2.987232 GGGGGACAAGTCTGATTGTAC 58.013 52.381 0.00 6.63 43.32 2.90
1797 2590 2.000447 GGACAAGTCTGATTGTACCGC 59.000 52.381 0.00 0.00 43.32 5.68
1798 2591 1.654105 GACAAGTCTGATTGTACCGCG 59.346 52.381 0.00 0.00 43.32 6.46
1800 2593 1.654105 CAAGTCTGATTGTACCGCGTC 59.346 52.381 4.92 0.00 0.00 5.19
1801 2594 0.885879 AGTCTGATTGTACCGCGTCA 59.114 50.000 4.92 0.00 0.00 4.35
1802 2595 1.271379 AGTCTGATTGTACCGCGTCAA 59.729 47.619 4.92 8.20 0.00 3.18
1803 2596 2.094182 AGTCTGATTGTACCGCGTCAAT 60.094 45.455 16.89 16.89 37.04 2.57
1806 2599 2.998668 GATTGTACCGCGTCAATCAG 57.001 50.000 27.52 8.78 45.08 2.90
1808 2601 2.442212 TTGTACCGCGTCAATCAGAA 57.558 45.000 4.92 0.00 0.00 3.02
1809 2602 2.442212 TGTACCGCGTCAATCAGAAA 57.558 45.000 4.92 0.00 0.00 2.52
1810 2603 2.063266 TGTACCGCGTCAATCAGAAAC 58.937 47.619 4.92 0.00 0.00 2.78
1811 2604 2.288579 TGTACCGCGTCAATCAGAAACT 60.289 45.455 4.92 0.00 0.00 2.66
1812 2605 1.429463 ACCGCGTCAATCAGAAACTC 58.571 50.000 4.92 0.00 0.00 3.01
1813 2606 0.366871 CCGCGTCAATCAGAAACTCG 59.633 55.000 4.92 0.00 0.00 4.18
1814 2607 0.366871 CGCGTCAATCAGAAACTCGG 59.633 55.000 0.00 0.00 0.00 4.63
1815 2608 0.721718 GCGTCAATCAGAAACTCGGG 59.278 55.000 0.00 0.00 0.00 5.14
1816 2609 1.671850 GCGTCAATCAGAAACTCGGGA 60.672 52.381 0.00 0.00 0.00 5.14
1817 2610 2.683968 CGTCAATCAGAAACTCGGGAA 58.316 47.619 0.00 0.00 0.00 3.97
1819 2612 3.684788 CGTCAATCAGAAACTCGGGAATT 59.315 43.478 0.00 0.00 0.00 2.17
1820 2613 4.868171 CGTCAATCAGAAACTCGGGAATTA 59.132 41.667 0.00 0.00 0.00 1.40
1821 2614 5.220416 CGTCAATCAGAAACTCGGGAATTAC 60.220 44.000 0.00 0.00 0.00 1.89
1823 2616 6.148811 GTCAATCAGAAACTCGGGAATTACAA 59.851 38.462 0.00 0.00 0.00 2.41
1824 2617 6.712998 TCAATCAGAAACTCGGGAATTACAAA 59.287 34.615 0.00 0.00 0.00 2.83
1825 2618 6.743575 ATCAGAAACTCGGGAATTACAAAG 57.256 37.500 0.00 0.00 0.00 2.77
1827 2620 6.292923 TCAGAAACTCGGGAATTACAAAGAA 58.707 36.000 0.00 0.00 0.00 2.52
1828 2621 6.768861 TCAGAAACTCGGGAATTACAAAGAAA 59.231 34.615 0.00 0.00 0.00 2.52
1829 2622 7.041372 TCAGAAACTCGGGAATTACAAAGAAAG 60.041 37.037 0.00 0.00 0.00 2.62
1830 2623 6.996282 AGAAACTCGGGAATTACAAAGAAAGA 59.004 34.615 0.00 0.00 0.00 2.52
1831 2624 6.803154 AACTCGGGAATTACAAAGAAAGAG 57.197 37.500 0.00 0.00 0.00 2.85
1832 2625 6.110411 ACTCGGGAATTACAAAGAAAGAGA 57.890 37.500 0.00 0.00 0.00 3.10
1833 2626 6.712276 ACTCGGGAATTACAAAGAAAGAGAT 58.288 36.000 0.00 0.00 0.00 2.75
1834 2627 7.848128 ACTCGGGAATTACAAAGAAAGAGATA 58.152 34.615 0.00 0.00 0.00 1.98
1835 2628 8.487028 ACTCGGGAATTACAAAGAAAGAGATAT 58.513 33.333 0.00 0.00 0.00 1.63
1836 2629 9.982651 CTCGGGAATTACAAAGAAAGAGATATA 57.017 33.333 0.00 0.00 0.00 0.86
1866 3300 8.532819 AGTCTATACTTATATACTGCCAAAGCC 58.467 37.037 0.00 0.00 31.99 4.35
1867 3301 8.532819 GTCTATACTTATATACTGCCAAAGCCT 58.467 37.037 0.00 0.00 38.69 4.58
1868 3302 8.750298 TCTATACTTATATACTGCCAAAGCCTC 58.250 37.037 0.00 0.00 38.69 4.70
1869 3303 5.896073 ACTTATATACTGCCAAAGCCTCT 57.104 39.130 0.00 0.00 38.69 3.69
1871 3305 6.663734 ACTTATATACTGCCAAAGCCTCTTT 58.336 36.000 0.00 0.00 38.69 2.52
1886 3320 3.624777 CCTCTTTGGCACATCTATTGGT 58.375 45.455 0.00 0.00 39.30 3.67
1887 3321 4.019174 CCTCTTTGGCACATCTATTGGTT 58.981 43.478 0.00 0.00 39.30 3.67
1888 3322 5.192927 CCTCTTTGGCACATCTATTGGTTA 58.807 41.667 0.00 0.00 39.30 2.85
1889 3323 5.066505 CCTCTTTGGCACATCTATTGGTTAC 59.933 44.000 0.00 0.00 39.30 2.50
1890 3324 5.565509 TCTTTGGCACATCTATTGGTTACA 58.434 37.500 0.00 0.00 39.30 2.41
1892 3326 3.616219 TGGCACATCTATTGGTTACACC 58.384 45.455 0.00 0.00 39.22 4.16
1895 3329 7.256261 TTGGCACATCTATTGGTTACACCATT 61.256 38.462 0.00 0.00 44.17 3.16
1896 3330 8.018695 TTGGCACATCTATTGGTTACACCATTA 61.019 37.037 0.00 0.00 44.17 1.90
1904 3338 3.681593 TGGTTACACCATTAGCTTCACC 58.318 45.455 0.00 0.00 44.79 4.02
1905 3339 3.073209 TGGTTACACCATTAGCTTCACCA 59.927 43.478 0.00 0.00 44.79 4.17
1906 3340 3.439129 GGTTACACCATTAGCTTCACCAC 59.561 47.826 0.00 0.00 38.42 4.16
1907 3341 2.200373 ACACCATTAGCTTCACCACC 57.800 50.000 0.00 0.00 0.00 4.61
1909 3343 2.086869 CACCATTAGCTTCACCACCAG 58.913 52.381 0.00 0.00 0.00 4.00
1912 3346 3.270877 CCATTAGCTTCACCACCAGTAC 58.729 50.000 0.00 0.00 0.00 2.73
1913 3347 3.307410 CCATTAGCTTCACCACCAGTACA 60.307 47.826 0.00 0.00 0.00 2.90
1914 3348 4.323417 CATTAGCTTCACCACCAGTACAA 58.677 43.478 0.00 0.00 0.00 2.41
1916 3350 3.290948 AGCTTCACCACCAGTACAAAA 57.709 42.857 0.00 0.00 0.00 2.44
1917 3351 2.949644 AGCTTCACCACCAGTACAAAAC 59.050 45.455 0.00 0.00 0.00 2.43
1919 3353 3.003378 GCTTCACCACCAGTACAAAACTC 59.997 47.826 0.00 0.00 35.76 3.01
1920 3354 3.916359 TCACCACCAGTACAAAACTCA 57.084 42.857 0.00 0.00 35.76 3.41
1922 3356 4.590918 TCACCACCAGTACAAAACTCAAA 58.409 39.130 0.00 0.00 35.76 2.69
1923 3357 5.197451 TCACCACCAGTACAAAACTCAAAT 58.803 37.500 0.00 0.00 35.76 2.32
1924 3358 5.298276 TCACCACCAGTACAAAACTCAAATC 59.702 40.000 0.00 0.00 35.76 2.17
1925 3359 4.583073 ACCACCAGTACAAAACTCAAATCC 59.417 41.667 0.00 0.00 35.76 3.01
1926 3360 4.022329 CCACCAGTACAAAACTCAAATCCC 60.022 45.833 0.00 0.00 35.76 3.85
1927 3361 4.827284 CACCAGTACAAAACTCAAATCCCT 59.173 41.667 0.00 0.00 35.76 4.20
1928 3362 4.827284 ACCAGTACAAAACTCAAATCCCTG 59.173 41.667 0.00 0.00 35.76 4.45
1929 3363 5.070001 CCAGTACAAAACTCAAATCCCTGA 58.930 41.667 0.00 0.00 35.76 3.86
1931 3365 6.040391 CCAGTACAAAACTCAAATCCCTGAAA 59.960 38.462 0.00 0.00 35.76 2.69
1933 3367 7.978975 CAGTACAAAACTCAAATCCCTGAAAAA 59.021 33.333 0.00 0.00 35.76 1.94
1965 4478 4.702831 TGTGCGCATCTCCATAAAAGATA 58.297 39.130 15.91 0.00 32.24 1.98
1966 4479 5.308014 TGTGCGCATCTCCATAAAAGATAT 58.692 37.500 15.91 0.00 32.24 1.63
1967 4480 5.764686 TGTGCGCATCTCCATAAAAGATATT 59.235 36.000 15.91 0.00 32.24 1.28
1970 4483 5.634896 CGCATCTCCATAAAAGATATTGCC 58.365 41.667 0.00 0.00 32.24 4.52
1973 4486 6.127786 GCATCTCCATAAAAGATATTGCCTCC 60.128 42.308 0.00 0.00 32.24 4.30
1976 4489 5.385198 TCCATAAAAGATATTGCCTCCCAC 58.615 41.667 0.00 0.00 0.00 4.61
1977 4490 5.134339 TCCATAAAAGATATTGCCTCCCACT 59.866 40.000 0.00 0.00 0.00 4.00
1978 4491 5.242393 CCATAAAAGATATTGCCTCCCACTG 59.758 44.000 0.00 0.00 0.00 3.66
1979 4492 4.591321 AAAAGATATTGCCTCCCACTGA 57.409 40.909 0.00 0.00 0.00 3.41
1981 4494 4.363991 AAGATATTGCCTCCCACTGATC 57.636 45.455 0.00 0.00 0.00 2.92
1982 4495 2.301296 AGATATTGCCTCCCACTGATCG 59.699 50.000 0.00 0.00 0.00 3.69
1984 4497 1.135094 ATTGCCTCCCACTGATCGAT 58.865 50.000 0.00 0.00 0.00 3.59
1985 4498 0.911769 TTGCCTCCCACTGATCGATT 59.088 50.000 0.00 0.00 0.00 3.34
1986 4499 1.788229 TGCCTCCCACTGATCGATTA 58.212 50.000 0.00 0.00 0.00 1.75
1990 7195 3.055530 GCCTCCCACTGATCGATTATCAT 60.056 47.826 0.00 0.00 43.70 2.45
1994 7199 4.156739 TCCCACTGATCGATTATCATCTCG 59.843 45.833 0.00 0.00 43.70 4.04
1996 7201 4.082517 CCACTGATCGATTATCATCTCGGT 60.083 45.833 0.00 0.00 43.70 4.69
1997 7202 5.465051 CACTGATCGATTATCATCTCGGTT 58.535 41.667 0.00 0.00 43.70 4.44
1998 7203 5.570973 CACTGATCGATTATCATCTCGGTTC 59.429 44.000 0.00 0.00 43.70 3.62
2007 7212 1.623311 TCATCTCGGTTCCAAGCTTGA 59.377 47.619 28.05 11.04 0.00 3.02
2008 7213 1.734465 CATCTCGGTTCCAAGCTTGAC 59.266 52.381 28.05 17.91 0.00 3.18
2009 7214 0.756294 TCTCGGTTCCAAGCTTGACA 59.244 50.000 28.05 10.94 0.00 3.58
2010 7215 1.347707 TCTCGGTTCCAAGCTTGACAT 59.652 47.619 28.05 0.00 0.00 3.06
2016 7221 2.113860 TCCAAGCTTGACATACTGCC 57.886 50.000 28.05 0.00 0.00 4.85
2017 7222 1.350684 TCCAAGCTTGACATACTGCCA 59.649 47.619 28.05 0.00 0.00 4.92
2018 7223 2.161855 CCAAGCTTGACATACTGCCAA 58.838 47.619 28.05 0.00 0.00 4.52
2024 7229 4.878397 AGCTTGACATACTGCCAAGTAATC 59.122 41.667 5.32 0.00 39.57 1.75
2025 7230 4.635765 GCTTGACATACTGCCAAGTAATCA 59.364 41.667 5.32 0.00 39.57 2.57
2026 7231 5.447818 GCTTGACATACTGCCAAGTAATCAC 60.448 44.000 5.32 0.00 39.57 3.06
2027 7232 5.420725 TGACATACTGCCAAGTAATCACT 57.579 39.130 0.00 0.00 42.17 3.41
2028 7233 5.804639 TGACATACTGCCAAGTAATCACTT 58.195 37.500 0.00 0.00 46.15 3.16
2030 7235 6.371548 TGACATACTGCCAAGTAATCACTTTC 59.628 38.462 0.00 0.00 42.51 2.62
2032 7237 4.098914 ACTGCCAAGTAATCACTTTCCA 57.901 40.909 0.00 0.00 42.51 3.53
2034 7239 2.819608 TGCCAAGTAATCACTTTCCAGC 59.180 45.455 0.00 0.00 42.51 4.85
2035 7240 2.819608 GCCAAGTAATCACTTTCCAGCA 59.180 45.455 0.00 0.00 42.51 4.41
2036 7241 3.366374 GCCAAGTAATCACTTTCCAGCAC 60.366 47.826 0.00 0.00 42.51 4.40
2037 7242 3.191371 CCAAGTAATCACTTTCCAGCACC 59.809 47.826 0.00 0.00 42.51 5.01
2038 7243 3.788227 AGTAATCACTTTCCAGCACCA 57.212 42.857 0.00 0.00 0.00 4.17
2039 7244 3.412386 AGTAATCACTTTCCAGCACCAC 58.588 45.455 0.00 0.00 0.00 4.16
2040 7245 2.363306 AATCACTTTCCAGCACCACA 57.637 45.000 0.00 0.00 0.00 4.17
2041 7246 1.609208 ATCACTTTCCAGCACCACAC 58.391 50.000 0.00 0.00 0.00 3.82
2042 7247 0.813610 TCACTTTCCAGCACCACACG 60.814 55.000 0.00 0.00 0.00 4.49
2043 7248 1.525995 ACTTTCCAGCACCACACGG 60.526 57.895 0.00 0.00 38.77 4.94
2045 7250 3.783362 TTTCCAGCACCACACGGGG 62.783 63.158 0.00 0.00 42.91 5.73
2047 7252 3.632080 CCAGCACCACACGGGGTA 61.632 66.667 0.00 0.00 39.79 3.69
2048 7253 2.428187 CAGCACCACACGGGGTAA 59.572 61.111 0.00 0.00 39.79 2.85
2049 7254 1.228003 CAGCACCACACGGGGTAAA 60.228 57.895 0.00 0.00 39.79 2.01
2050 7255 0.820074 CAGCACCACACGGGGTAAAA 60.820 55.000 0.00 0.00 39.79 1.52
2051 7256 0.820482 AGCACCACACGGGGTAAAAC 60.820 55.000 0.00 0.00 39.79 2.43
2052 7257 1.798234 GCACCACACGGGGTAAAACC 61.798 60.000 0.00 0.00 39.79 3.27
2064 7269 1.538512 GGTAAAACCCTTGTTCCTCGC 59.461 52.381 0.00 0.00 32.15 5.03
2065 7270 2.223745 GTAAAACCCTTGTTCCTCGCA 58.776 47.619 0.00 0.00 32.15 5.10
2066 7271 1.770294 AAAACCCTTGTTCCTCGCAA 58.230 45.000 0.00 0.00 32.15 4.85
2067 7272 1.318576 AAACCCTTGTTCCTCGCAAG 58.681 50.000 0.00 0.00 42.00 4.01
2068 7273 1.172812 AACCCTTGTTCCTCGCAAGC 61.173 55.000 0.00 0.00 41.27 4.01
2069 7274 1.600636 CCCTTGTTCCTCGCAAGCA 60.601 57.895 0.00 0.00 41.27 3.91
2070 7275 1.580845 CCCTTGTTCCTCGCAAGCAG 61.581 60.000 0.00 0.00 41.27 4.24
2071 7276 0.886490 CCTTGTTCCTCGCAAGCAGT 60.886 55.000 0.00 0.00 41.27 4.40
2072 7277 0.236711 CTTGTTCCTCGCAAGCAGTG 59.763 55.000 0.00 0.00 37.18 3.66
2084 7289 3.193157 CAAGCAGTGCAGTACAACATC 57.807 47.619 19.20 0.00 0.00 3.06
2085 7290 1.813513 AGCAGTGCAGTACAACATCC 58.186 50.000 19.20 0.00 0.00 3.51
2086 7291 0.804989 GCAGTGCAGTACAACATCCC 59.195 55.000 11.09 0.00 0.00 3.85
2087 7292 1.611673 GCAGTGCAGTACAACATCCCT 60.612 52.381 11.09 0.00 0.00 4.20
2088 7293 2.354704 GCAGTGCAGTACAACATCCCTA 60.355 50.000 11.09 0.00 0.00 3.53
2089 7294 3.262420 CAGTGCAGTACAACATCCCTAC 58.738 50.000 0.00 0.00 0.00 3.18
2090 7295 2.903784 AGTGCAGTACAACATCCCTACA 59.096 45.455 0.00 0.00 0.00 2.74
2091 7296 3.326588 AGTGCAGTACAACATCCCTACAA 59.673 43.478 0.00 0.00 0.00 2.41
2092 7297 3.684788 GTGCAGTACAACATCCCTACAAG 59.315 47.826 0.00 0.00 0.00 3.16
2093 7298 2.678336 GCAGTACAACATCCCTACAAGC 59.322 50.000 0.00 0.00 0.00 4.01
2094 7299 3.270877 CAGTACAACATCCCTACAAGCC 58.729 50.000 0.00 0.00 0.00 4.35
2095 7300 2.910319 AGTACAACATCCCTACAAGCCA 59.090 45.455 0.00 0.00 0.00 4.75
2096 7301 3.523564 AGTACAACATCCCTACAAGCCAT 59.476 43.478 0.00 0.00 0.00 4.40
2097 7302 3.004752 ACAACATCCCTACAAGCCATC 57.995 47.619 0.00 0.00 0.00 3.51
2098 7303 2.308570 ACAACATCCCTACAAGCCATCA 59.691 45.455 0.00 0.00 0.00 3.07
2099 7304 2.947652 CAACATCCCTACAAGCCATCAG 59.052 50.000 0.00 0.00 0.00 2.90
2100 7305 2.200081 ACATCCCTACAAGCCATCAGT 58.800 47.619 0.00 0.00 0.00 3.41
2101 7306 2.578021 ACATCCCTACAAGCCATCAGTT 59.422 45.455 0.00 0.00 0.00 3.16
2102 7307 3.209410 CATCCCTACAAGCCATCAGTTC 58.791 50.000 0.00 0.00 0.00 3.01
2103 7308 1.207089 TCCCTACAAGCCATCAGTTCG 59.793 52.381 0.00 0.00 0.00 3.95
2104 7309 1.207089 CCCTACAAGCCATCAGTTCGA 59.793 52.381 0.00 0.00 0.00 3.71
2105 7310 2.158900 CCCTACAAGCCATCAGTTCGAT 60.159 50.000 0.00 0.00 33.27 3.59
2114 7319 3.526931 CATCAGTTCGATGGTGTAGGT 57.473 47.619 0.00 0.00 46.73 3.08
2115 7320 3.448686 CATCAGTTCGATGGTGTAGGTC 58.551 50.000 0.00 0.00 46.73 3.85
2116 7321 2.803956 TCAGTTCGATGGTGTAGGTCT 58.196 47.619 0.00 0.00 0.00 3.85
2117 7322 2.753452 TCAGTTCGATGGTGTAGGTCTC 59.247 50.000 0.00 0.00 0.00 3.36
2118 7323 2.492088 CAGTTCGATGGTGTAGGTCTCA 59.508 50.000 0.00 0.00 0.00 3.27
2119 7324 3.056821 CAGTTCGATGGTGTAGGTCTCAA 60.057 47.826 0.00 0.00 0.00 3.02
2120 7325 3.576982 AGTTCGATGGTGTAGGTCTCAAA 59.423 43.478 0.00 0.00 0.00 2.69
2121 7326 3.868757 TCGATGGTGTAGGTCTCAAAG 57.131 47.619 0.00 0.00 0.00 2.77
2122 7327 2.094182 TCGATGGTGTAGGTCTCAAAGC 60.094 50.000 0.00 0.00 0.00 3.51
2123 7328 2.353704 CGATGGTGTAGGTCTCAAAGCA 60.354 50.000 0.00 0.00 0.00 3.91
2124 7329 3.679917 CGATGGTGTAGGTCTCAAAGCAT 60.680 47.826 0.00 0.00 0.00 3.79
2125 7330 3.057969 TGGTGTAGGTCTCAAAGCATG 57.942 47.619 0.00 0.00 0.00 4.06
2126 7331 1.740025 GGTGTAGGTCTCAAAGCATGC 59.260 52.381 10.51 10.51 0.00 4.06
2127 7332 2.616510 GGTGTAGGTCTCAAAGCATGCT 60.617 50.000 16.30 16.30 0.00 3.79
2128 7333 2.417933 GTGTAGGTCTCAAAGCATGCTG 59.582 50.000 23.48 11.14 0.00 4.41
2129 7334 2.038952 TGTAGGTCTCAAAGCATGCTGT 59.961 45.455 23.48 14.23 0.00 4.40
2130 7335 3.260632 TGTAGGTCTCAAAGCATGCTGTA 59.739 43.478 23.48 8.86 0.00 2.74
2131 7336 3.641434 AGGTCTCAAAGCATGCTGTAT 57.359 42.857 23.48 8.11 0.00 2.29
2132 7337 4.760530 AGGTCTCAAAGCATGCTGTATA 57.239 40.909 23.48 6.44 0.00 1.47
2133 7338 5.301835 AGGTCTCAAAGCATGCTGTATAT 57.698 39.130 23.48 0.95 0.00 0.86
2134 7339 5.688807 AGGTCTCAAAGCATGCTGTATATT 58.311 37.500 23.48 8.53 0.00 1.28
2135 7340 6.125029 AGGTCTCAAAGCATGCTGTATATTT 58.875 36.000 23.48 7.70 0.00 1.40
2136 7341 7.282585 AGGTCTCAAAGCATGCTGTATATTTA 58.717 34.615 23.48 1.70 0.00 1.40
2137 7342 7.941238 AGGTCTCAAAGCATGCTGTATATTTAT 59.059 33.333 23.48 0.00 0.00 1.40
2138 7343 8.571336 GGTCTCAAAGCATGCTGTATATTTATT 58.429 33.333 23.48 5.21 0.00 1.40
2143 7348 9.398170 CAAAGCATGCTGTATATTTATTACACC 57.602 33.333 23.48 0.00 0.00 4.16
2144 7349 7.364522 AGCATGCTGTATATTTATTACACCG 57.635 36.000 21.98 0.00 0.00 4.94
2145 7350 7.158697 AGCATGCTGTATATTTATTACACCGA 58.841 34.615 21.98 0.00 0.00 4.69
2146 7351 7.331934 AGCATGCTGTATATTTATTACACCGAG 59.668 37.037 21.98 0.00 0.00 4.63
2147 7352 7.456253 CATGCTGTATATTTATTACACCGAGC 58.544 38.462 0.00 0.00 0.00 5.03
2148 7353 6.755206 TGCTGTATATTTATTACACCGAGCT 58.245 36.000 0.00 0.00 0.00 4.09
2149 7354 6.645003 TGCTGTATATTTATTACACCGAGCTG 59.355 38.462 0.00 0.00 0.00 4.24
2150 7355 6.645415 GCTGTATATTTATTACACCGAGCTGT 59.355 38.462 0.00 0.00 0.00 4.40
2151 7356 7.148787 GCTGTATATTTATTACACCGAGCTGTC 60.149 40.741 0.00 0.00 0.00 3.51
2152 7357 7.718525 TGTATATTTATTACACCGAGCTGTCA 58.281 34.615 0.00 0.00 0.00 3.58
2153 7358 7.865889 TGTATATTTATTACACCGAGCTGTCAG 59.134 37.037 0.00 0.00 0.00 3.51
2154 7359 3.520290 TTATTACACCGAGCTGTCAGG 57.480 47.619 1.14 0.00 0.00 3.86
2155 7360 1.557099 ATTACACCGAGCTGTCAGGA 58.443 50.000 1.14 0.00 0.00 3.86
2156 7361 1.334160 TTACACCGAGCTGTCAGGAA 58.666 50.000 1.14 0.00 0.00 3.36
2157 7362 1.557099 TACACCGAGCTGTCAGGAAT 58.443 50.000 1.14 0.00 0.00 3.01
2158 7363 0.687354 ACACCGAGCTGTCAGGAATT 59.313 50.000 1.14 0.00 0.00 2.17
2159 7364 1.081892 CACCGAGCTGTCAGGAATTG 58.918 55.000 1.14 0.00 0.00 2.32
2160 7365 0.976641 ACCGAGCTGTCAGGAATTGA 59.023 50.000 1.14 0.00 0.00 2.57
2170 7375 3.301794 TCAGGAATTGACCATCATGGG 57.698 47.619 9.04 0.00 43.37 4.00
2171 7376 2.582172 TCAGGAATTGACCATCATGGGT 59.418 45.455 9.04 0.00 43.37 4.51
2172 7377 3.011595 TCAGGAATTGACCATCATGGGTT 59.988 43.478 9.04 0.00 43.37 4.11
2173 7378 3.382546 CAGGAATTGACCATCATGGGTTC 59.617 47.826 9.04 6.72 43.37 3.62
2174 7379 3.270433 AGGAATTGACCATCATGGGTTCT 59.730 43.478 9.04 0.00 43.37 3.01
2175 7380 3.633986 GGAATTGACCATCATGGGTTCTC 59.366 47.826 9.04 0.00 43.37 2.87
2176 7381 4.272489 GAATTGACCATCATGGGTTCTCA 58.728 43.478 9.04 0.00 43.37 3.27
2177 7382 2.787473 TGACCATCATGGGTTCTCAC 57.213 50.000 9.04 0.00 43.37 3.51
2178 7383 1.281867 TGACCATCATGGGTTCTCACC 59.718 52.381 9.04 0.00 43.37 4.02
2179 7384 1.281867 GACCATCATGGGTTCTCACCA 59.718 52.381 9.04 0.00 46.43 4.17
2180 7385 1.004745 ACCATCATGGGTTCTCACCAC 59.995 52.381 9.04 0.00 46.43 4.16
2181 7386 1.283029 CCATCATGGGTTCTCACCACT 59.717 52.381 0.00 0.00 46.43 4.00
2182 7387 2.636830 CATCATGGGTTCTCACCACTC 58.363 52.381 0.00 0.00 46.43 3.51
2183 7388 2.030027 TCATGGGTTCTCACCACTCT 57.970 50.000 0.00 0.00 46.43 3.24
2184 7389 1.902508 TCATGGGTTCTCACCACTCTC 59.097 52.381 0.00 0.00 46.43 3.20
2185 7390 1.905215 CATGGGTTCTCACCACTCTCT 59.095 52.381 0.00 0.00 46.43 3.10
2186 7391 1.633774 TGGGTTCTCACCACTCTCTC 58.366 55.000 0.00 0.00 46.43 3.20
2187 7392 0.899019 GGGTTCTCACCACTCTCTCC 59.101 60.000 0.00 0.00 46.43 3.71
2188 7393 1.633774 GGTTCTCACCACTCTCTCCA 58.366 55.000 0.00 0.00 43.61 3.86
2189 7394 1.548269 GGTTCTCACCACTCTCTCCAG 59.452 57.143 0.00 0.00 43.61 3.86
2190 7395 1.548269 GTTCTCACCACTCTCTCCAGG 59.452 57.143 0.00 0.00 0.00 4.45
2191 7396 0.040351 TCTCACCACTCTCTCCAGGG 59.960 60.000 0.00 0.00 0.00 4.45
2192 7397 1.610673 TCACCACTCTCTCCAGGGC 60.611 63.158 0.00 0.00 0.00 5.19
2193 7398 2.284995 ACCACTCTCTCCAGGGCC 60.285 66.667 0.00 0.00 0.00 5.80
2194 7399 3.465403 CCACTCTCTCCAGGGCCG 61.465 72.222 0.00 0.00 0.00 6.13
2195 7400 2.681778 CACTCTCTCCAGGGCCGT 60.682 66.667 0.00 0.00 0.00 5.68
2196 7401 2.363147 ACTCTCTCCAGGGCCGTC 60.363 66.667 0.00 0.00 0.00 4.79
2197 7402 2.043450 CTCTCTCCAGGGCCGTCT 60.043 66.667 0.00 0.00 0.00 4.18
2198 7403 2.043852 TCTCTCCAGGGCCGTCTC 60.044 66.667 0.00 0.00 0.00 3.36
2199 7404 3.151022 CTCTCCAGGGCCGTCTCC 61.151 72.222 0.00 0.00 0.00 3.71
2200 7405 3.965026 CTCTCCAGGGCCGTCTCCA 62.965 68.421 0.00 0.00 0.00 3.86
2201 7406 3.465403 CTCCAGGGCCGTCTCCAG 61.465 72.222 0.00 0.00 0.00 3.86
2204 7409 3.003173 CAGGGCCGTCTCCAGGAA 61.003 66.667 0.00 0.00 0.00 3.36
2205 7410 2.041265 AGGGCCGTCTCCAGGAAT 59.959 61.111 0.00 0.00 0.00 3.01
2206 7411 1.616628 AGGGCCGTCTCCAGGAATT 60.617 57.895 0.00 0.00 0.00 2.17
2207 7412 1.208165 AGGGCCGTCTCCAGGAATTT 61.208 55.000 0.00 0.00 0.00 1.82
2208 7413 1.032114 GGGCCGTCTCCAGGAATTTG 61.032 60.000 0.00 0.00 0.00 2.32
2209 7414 1.032114 GGCCGTCTCCAGGAATTTGG 61.032 60.000 0.00 0.00 39.70 3.28
2210 7415 1.032114 GCCGTCTCCAGGAATTTGGG 61.032 60.000 0.00 0.00 38.81 4.12
2211 7416 0.394352 CCGTCTCCAGGAATTTGGGG 60.394 60.000 0.00 0.00 40.27 4.96
2212 7417 0.394352 CGTCTCCAGGAATTTGGGGG 60.394 60.000 0.00 0.00 39.32 5.40
2213 7418 0.684479 GTCTCCAGGAATTTGGGGGC 60.684 60.000 0.00 0.00 39.32 5.80
2214 7419 1.381735 CTCCAGGAATTTGGGGGCC 60.382 63.158 0.00 0.00 38.81 5.80
2215 7420 2.365502 CCAGGAATTTGGGGGCCC 60.366 66.667 15.76 15.76 34.46 5.80
2216 7421 2.759560 CAGGAATTTGGGGGCCCG 60.760 66.667 17.79 0.00 39.42 6.13
2217 7422 4.074408 AGGAATTTGGGGGCCCGG 62.074 66.667 17.79 0.00 39.42 5.73
2219 7424 4.068887 GAATTTGGGGGCCCGGGA 62.069 66.667 29.31 0.00 39.42 5.14
2220 7425 4.392166 AATTTGGGGGCCCGGGAC 62.392 66.667 29.31 25.86 39.42 4.46
2237 7442 4.168922 GGGACGAAATACAAAAAGTGGG 57.831 45.455 0.00 0.00 0.00 4.61
2238 7443 3.057104 GGGACGAAATACAAAAAGTGGGG 60.057 47.826 0.00 0.00 0.00 4.96
2239 7444 3.570975 GGACGAAATACAAAAAGTGGGGT 59.429 43.478 0.00 0.00 0.00 4.95
2240 7445 4.038282 GGACGAAATACAAAAAGTGGGGTT 59.962 41.667 0.00 0.00 0.00 4.11
2241 7446 5.190992 ACGAAATACAAAAAGTGGGGTTC 57.809 39.130 0.00 0.00 0.00 3.62
2242 7447 4.891168 ACGAAATACAAAAAGTGGGGTTCT 59.109 37.500 0.00 0.00 0.00 3.01
2243 7448 6.063404 ACGAAATACAAAAAGTGGGGTTCTA 58.937 36.000 0.00 0.00 0.00 2.10
2244 7449 6.546772 ACGAAATACAAAAAGTGGGGTTCTAA 59.453 34.615 0.00 0.00 0.00 2.10
2245 7450 7.068470 ACGAAATACAAAAAGTGGGGTTCTAAA 59.932 33.333 0.00 0.00 0.00 1.85
2246 7451 7.921745 CGAAATACAAAAAGTGGGGTTCTAAAA 59.078 33.333 0.00 0.00 0.00 1.52
2247 7452 9.772973 GAAATACAAAAAGTGGGGTTCTAAAAT 57.227 29.630 0.00 0.00 0.00 1.82
2252 7457 9.961264 ACAAAAAGTGGGGTTCTAAAATTTTAA 57.039 25.926 11.62 0.00 0.00 1.52
2258 7463 9.483916 AGTGGGGTTCTAAAATTTTAAAATTCG 57.516 29.630 22.96 15.38 37.62 3.34
2259 7464 9.263538 GTGGGGTTCTAAAATTTTAAAATTCGT 57.736 29.630 22.96 16.93 37.62 3.85
2282 7487 9.412460 TCGTATAACTAAAGAAGTATCCAAGGA 57.588 33.333 0.00 0.00 37.50 3.36
2300 7505 8.853077 TCCAAGGAATATCTTATATTGCAGTG 57.147 34.615 11.97 9.44 0.00 3.66
2301 7506 7.884877 TCCAAGGAATATCTTATATTGCAGTGG 59.115 37.037 18.04 18.04 35.76 4.00
2302 7507 7.362401 CCAAGGAATATCTTATATTGCAGTGGC 60.362 40.741 14.85 0.00 41.68 5.01
2303 7508 6.183347 AGGAATATCTTATATTGCAGTGGCC 58.817 40.000 11.97 0.00 40.13 5.36
2304 7509 5.945784 GGAATATCTTATATTGCAGTGGCCA 59.054 40.000 0.00 0.00 40.13 5.36
2305 7510 6.434028 GGAATATCTTATATTGCAGTGGCCAA 59.566 38.462 7.24 0.00 40.13 4.52
2306 7511 7.039784 GGAATATCTTATATTGCAGTGGCCAAA 60.040 37.037 7.24 0.00 40.13 3.28
2307 7512 8.426569 AATATCTTATATTGCAGTGGCCAAAT 57.573 30.769 7.24 6.27 40.13 2.32
2308 7513 9.532494 AATATCTTATATTGCAGTGGCCAAATA 57.468 29.630 7.24 8.71 40.13 1.40
2309 7514 7.838079 ATCTTATATTGCAGTGGCCAAATAA 57.162 32.000 7.24 0.47 40.13 1.40
2310 7515 7.838079 TCTTATATTGCAGTGGCCAAATAAT 57.162 32.000 7.24 8.96 40.13 1.28
2311 7516 8.932434 TCTTATATTGCAGTGGCCAAATAATA 57.068 30.769 7.24 10.97 40.13 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 1.673920 GTTCAGAAAACTTGGCACGGA 59.326 47.619 0.00 0.00 0.00 4.69
7 8 2.842208 TGTTCAGAAAACTTGGCACG 57.158 45.000 0.00 0.00 0.00 5.34
39 40 8.947055 AATAATTTCTTCCCATGTGTTTATGC 57.053 30.769 0.00 0.00 0.00 3.14
60 61 5.236911 AGTTAAAGGCGTGTCACGAAAATAA 59.763 36.000 28.83 17.02 46.05 1.40
61 62 4.751098 AGTTAAAGGCGTGTCACGAAAATA 59.249 37.500 28.83 12.44 46.05 1.40
114 120 2.141517 CCCTATCGAGCAAATCAGCAG 58.858 52.381 0.00 0.00 36.85 4.24
117 123 4.202264 ACCTAACCCTATCGAGCAAATCAG 60.202 45.833 0.00 0.00 0.00 2.90
150 160 4.935808 ACAACATCGAGGGAAAAGACATAC 59.064 41.667 0.69 0.00 0.00 2.39
152 162 4.021102 ACAACATCGAGGGAAAAGACAT 57.979 40.909 0.69 0.00 0.00 3.06
172 183 5.862860 GCTGGAGAGTACAGTACAAACTTAC 59.137 44.000 13.37 7.16 38.22 2.34
173 184 5.773680 AGCTGGAGAGTACAGTACAAACTTA 59.226 40.000 13.37 3.15 38.22 2.24
174 185 4.589374 AGCTGGAGAGTACAGTACAAACTT 59.411 41.667 13.37 0.00 38.22 2.66
176 187 4.522722 AGCTGGAGAGTACAGTACAAAC 57.477 45.455 13.37 4.32 38.22 2.93
177 188 4.833380 AGAAGCTGGAGAGTACAGTACAAA 59.167 41.667 13.37 0.00 38.22 2.83
180 191 4.703093 AGAAGAAGCTGGAGAGTACAGTAC 59.297 45.833 2.05 2.05 38.22 2.73
181 192 4.924625 AGAAGAAGCTGGAGAGTACAGTA 58.075 43.478 0.00 0.00 38.22 2.74
182 193 3.773560 AGAAGAAGCTGGAGAGTACAGT 58.226 45.455 0.00 0.00 38.22 3.55
183 194 4.947388 AGTAGAAGAAGCTGGAGAGTACAG 59.053 45.833 0.00 0.00 38.95 2.74
188 199 5.398603 TTGAAGTAGAAGAAGCTGGAGAG 57.601 43.478 0.00 0.00 0.00 3.20
196 207 4.425520 CGTAGCCCTTGAAGTAGAAGAAG 58.574 47.826 0.00 0.00 0.00 2.85
229 241 2.789213 TGCCAAGCTAGCAAACATACA 58.211 42.857 18.83 2.62 37.28 2.29
241 253 0.319405 GGTTTGCTCATTGCCAAGCT 59.681 50.000 0.00 0.00 40.33 3.74
243 255 1.938016 GCAGGTTTGCTCATTGCCAAG 60.938 52.381 0.00 0.00 46.95 3.61
258 276 7.451566 AGTTGGAGAAAATAAATAACAGCAGGT 59.548 33.333 0.00 0.00 0.00 4.00
276 294 2.171237 CTGCATATGGACCAGTTGGAGA 59.829 50.000 17.95 0.00 38.94 3.71
292 310 7.015001 TGTCACTATCATCTGAAGTATCTGCAT 59.985 37.037 0.00 0.00 0.00 3.96
334 352 1.676006 ACCTCAAACTTTGCTTCACGG 59.324 47.619 0.00 0.00 0.00 4.94
403 421 1.927487 TGCTTCCGTACACCTCCTAA 58.073 50.000 0.00 0.00 0.00 2.69
408 431 2.632987 AGTTTTGCTTCCGTACACCT 57.367 45.000 0.00 0.00 0.00 4.00
440 463 8.392372 ACACTCCTTAAAAGTTTAGACCAATC 57.608 34.615 0.00 0.00 0.00 2.67
444 467 7.095481 CGGTAACACTCCTTAAAAGTTTAGACC 60.095 40.741 0.00 0.00 0.00 3.85
447 470 7.951530 TCGGTAACACTCCTTAAAAGTTTAG 57.048 36.000 0.00 0.00 0.00 1.85
461 487 3.188048 CACGAGTCTACTTCGGTAACACT 59.812 47.826 0.00 0.00 0.00 3.55
466 492 1.278985 TCCCACGAGTCTACTTCGGTA 59.721 52.381 0.00 0.00 0.00 4.02
467 493 0.037303 TCCCACGAGTCTACTTCGGT 59.963 55.000 0.00 0.00 0.00 4.69
469 495 0.096628 CGTCCCACGAGTCTACTTCG 59.903 60.000 0.00 0.00 46.05 3.79
470 496 0.450983 CCGTCCCACGAGTCTACTTC 59.549 60.000 0.00 0.00 46.05 3.01
472 498 0.392729 CTCCGTCCCACGAGTCTACT 60.393 60.000 0.00 0.00 46.05 2.57
473 499 1.375098 CCTCCGTCCCACGAGTCTAC 61.375 65.000 0.00 0.00 46.05 2.59
474 500 1.077930 CCTCCGTCCCACGAGTCTA 60.078 63.158 0.00 0.00 46.05 2.59
507 1223 8.891985 AGCTAGTGAGATCATATGGAATCTAA 57.108 34.615 2.13 0.00 0.00 2.10
527 1258 5.163824 CGAGAGAGATGCAGATTCTAGCTAG 60.164 48.000 15.01 15.01 0.00 3.42
558 1289 3.667497 ATTCGACAAGTCAGCTGAGAA 57.333 42.857 18.89 15.95 0.00 2.87
599 1332 4.283722 GGACTCAGGACCTCTGACTTTTTA 59.716 45.833 0.00 0.00 46.71 1.52
612 1345 3.366396 TGATAAGGTCAGGACTCAGGAC 58.634 50.000 0.00 0.00 31.80 3.85
616 1349 5.762179 ATTGTTGATAAGGTCAGGACTCA 57.238 39.130 0.00 0.00 38.29 3.41
618 1351 5.487488 TGGTATTGTTGATAAGGTCAGGACT 59.513 40.000 0.00 0.00 38.29 3.85
619 1352 5.585047 GTGGTATTGTTGATAAGGTCAGGAC 59.415 44.000 0.00 0.00 38.29 3.85
620 1353 5.249622 TGTGGTATTGTTGATAAGGTCAGGA 59.750 40.000 0.00 0.00 38.29 3.86
621 1354 5.496556 TGTGGTATTGTTGATAAGGTCAGG 58.503 41.667 0.00 0.00 38.29 3.86
622 1355 7.201732 GGATTGTGGTATTGTTGATAAGGTCAG 60.202 40.741 0.00 0.00 38.29 3.51
623 1356 6.601613 GGATTGTGGTATTGTTGATAAGGTCA 59.398 38.462 0.00 0.00 34.25 4.02
624 1357 6.601613 TGGATTGTGGTATTGTTGATAAGGTC 59.398 38.462 0.00 0.00 0.00 3.85
625 1358 6.489603 TGGATTGTGGTATTGTTGATAAGGT 58.510 36.000 0.00 0.00 0.00 3.50
781 1556 3.119245 CGAGAAAAGGTGATACGGGAGAA 60.119 47.826 0.00 0.00 0.00 2.87
782 1557 2.426024 CGAGAAAAGGTGATACGGGAGA 59.574 50.000 0.00 0.00 0.00 3.71
921 1699 4.252971 TGTACAAGTCTTCAGTGCTACC 57.747 45.455 0.00 0.00 0.00 3.18
945 1724 5.799936 ACGAACTCAAAAGAACAATGTTGTG 59.200 36.000 2.20 0.00 41.31 3.33
967 1746 2.996621 GACCTTGATCTTCTTCACCACG 59.003 50.000 0.00 0.00 0.00 4.94
975 1754 1.827969 CTGACCCGACCTTGATCTTCT 59.172 52.381 0.00 0.00 0.00 2.85
976 1755 1.740718 GCTGACCCGACCTTGATCTTC 60.741 57.143 0.00 0.00 0.00 2.87
977 1756 0.250513 GCTGACCCGACCTTGATCTT 59.749 55.000 0.00 0.00 0.00 2.40
993 1772 0.035725 TCACCTGCTCCATCAAGCTG 60.036 55.000 0.00 0.00 42.94 4.24
1140 1919 1.885049 TCTCCATCTCCTTTCCCCTG 58.115 55.000 0.00 0.00 0.00 4.45
1315 2094 3.431725 CAAAACCCTCTCCCGCGC 61.432 66.667 0.00 0.00 0.00 6.86
1316 2095 1.599797 AACAAAACCCTCTCCCGCG 60.600 57.895 0.00 0.00 0.00 6.46
1320 2099 3.440522 GCATCTACAACAAAACCCTCTCC 59.559 47.826 0.00 0.00 0.00 3.71
1322 2101 3.074412 CGCATCTACAACAAAACCCTCT 58.926 45.455 0.00 0.00 0.00 3.69
1341 2120 3.917329 TCTACTATCCACTGCATACGC 57.083 47.619 0.00 0.00 39.24 4.42
1343 2131 5.462398 CGGTTTTCTACTATCCACTGCATAC 59.538 44.000 0.00 0.00 0.00 2.39
1344 2132 5.361571 TCGGTTTTCTACTATCCACTGCATA 59.638 40.000 0.00 0.00 0.00 3.14
1355 2143 7.114811 GTGTACATCGTTTTCGGTTTTCTACTA 59.885 37.037 0.00 0.00 44.25 1.82
1357 2145 6.067039 GTGTACATCGTTTTCGGTTTTCTAC 58.933 40.000 0.00 0.00 44.25 2.59
1361 2149 4.571580 TGAGTGTACATCGTTTTCGGTTTT 59.428 37.500 0.00 0.00 44.25 2.43
1362 2150 4.025480 GTGAGTGTACATCGTTTTCGGTTT 60.025 41.667 0.00 0.00 44.25 3.27
1364 2152 3.054878 GTGAGTGTACATCGTTTTCGGT 58.945 45.455 0.00 0.00 44.25 4.69
1365 2153 2.090041 CGTGAGTGTACATCGTTTTCGG 59.910 50.000 0.00 0.00 44.25 4.30
1366 2154 2.722629 ACGTGAGTGTACATCGTTTTCG 59.277 45.455 0.00 1.42 46.97 3.46
1381 2169 1.059369 GCACTTGCGCATACGTGAG 59.941 57.895 28.09 18.02 42.83 3.51
1382 2170 3.164576 GCACTTGCGCATACGTGA 58.835 55.556 28.09 7.93 42.83 4.35
1392 2180 2.615912 ACAGAGAAAACAGAGCACTTGC 59.384 45.455 0.00 0.00 42.49 4.01
1393 2181 3.873361 TGACAGAGAAAACAGAGCACTTG 59.127 43.478 0.00 0.00 0.00 3.16
1395 2183 3.494048 CCTGACAGAGAAAACAGAGCACT 60.494 47.826 3.32 0.00 32.90 4.40
1399 2187 4.327982 TCACCTGACAGAGAAAACAGAG 57.672 45.455 3.32 0.00 32.90 3.35
1412 2200 9.814899 CCTTCATCTTATATATGATCACCTGAC 57.185 37.037 0.00 0.00 33.52 3.51
1425 2213 7.232127 CCTGCATGGTTTTCCTTCATCTTATAT 59.768 37.037 0.00 0.00 41.38 0.86
1426 2214 6.547141 CCTGCATGGTTTTCCTTCATCTTATA 59.453 38.462 0.00 0.00 41.38 0.98
1428 2216 4.706476 CCTGCATGGTTTTCCTTCATCTTA 59.294 41.667 0.00 0.00 41.38 2.10
1429 2217 3.512724 CCTGCATGGTTTTCCTTCATCTT 59.487 43.478 0.00 0.00 41.38 2.40
1431 2219 3.515330 CCTGCATGGTTTTCCTTCATC 57.485 47.619 0.00 0.00 41.38 2.92
1466 2255 1.258445 CGTACTCCCCCTCTGCAGTT 61.258 60.000 14.67 0.00 0.00 3.16
1499 2288 1.816835 TGCGACGAGTAAATCAGGACT 59.183 47.619 0.00 0.00 0.00 3.85
1502 2291 2.561733 TCTGCGACGAGTAAATCAGG 57.438 50.000 0.00 0.00 0.00 3.86
1504 2293 4.104696 TCATTCTGCGACGAGTAAATCA 57.895 40.909 0.00 0.00 0.00 2.57
1507 2296 5.886992 TCTATTCATTCTGCGACGAGTAAA 58.113 37.500 0.00 0.00 0.00 2.01
1513 2302 3.061797 GTCGTTCTATTCATTCTGCGACG 60.062 47.826 0.00 0.00 38.12 5.12
1520 2309 7.357368 CGGAATTACTCGTCGTTCTATTCATTC 60.357 40.741 0.00 0.00 0.00 2.67
1521 2310 6.417044 CGGAATTACTCGTCGTTCTATTCATT 59.583 38.462 0.00 0.00 0.00 2.57
1522 2311 5.913514 CGGAATTACTCGTCGTTCTATTCAT 59.086 40.000 0.00 0.00 0.00 2.57
1523 2312 5.268544 CGGAATTACTCGTCGTTCTATTCA 58.731 41.667 0.00 0.00 0.00 2.57
1524 2313 4.674211 CCGGAATTACTCGTCGTTCTATTC 59.326 45.833 0.00 0.00 0.00 1.75
1525 2314 4.336433 TCCGGAATTACTCGTCGTTCTATT 59.664 41.667 0.00 0.00 0.00 1.73
1526 2315 3.879295 TCCGGAATTACTCGTCGTTCTAT 59.121 43.478 0.00 0.00 0.00 1.98
1527 2316 3.270027 TCCGGAATTACTCGTCGTTCTA 58.730 45.455 0.00 0.00 0.00 2.10
1528 2317 2.086869 TCCGGAATTACTCGTCGTTCT 58.913 47.619 0.00 0.00 0.00 3.01
1529 2318 2.549633 TCCGGAATTACTCGTCGTTC 57.450 50.000 0.00 0.00 0.00 3.95
1530 2319 2.424601 TCATCCGGAATTACTCGTCGTT 59.575 45.455 9.01 0.00 0.00 3.85
1531 2320 2.019249 TCATCCGGAATTACTCGTCGT 58.981 47.619 9.01 0.00 0.00 4.34
1532 2321 2.768833 TCATCCGGAATTACTCGTCG 57.231 50.000 9.01 0.00 0.00 5.12
1533 2322 3.381949 CCTTCATCCGGAATTACTCGTC 58.618 50.000 9.01 0.00 34.32 4.20
1534 2323 2.102588 CCCTTCATCCGGAATTACTCGT 59.897 50.000 9.01 0.00 34.32 4.18
1535 2324 2.364324 TCCCTTCATCCGGAATTACTCG 59.636 50.000 9.01 0.00 34.32 4.18
1536 2325 3.388350 ACTCCCTTCATCCGGAATTACTC 59.612 47.826 9.01 0.00 34.32 2.59
1537 2326 3.385115 ACTCCCTTCATCCGGAATTACT 58.615 45.455 9.01 0.00 34.32 2.24
1538 2327 3.840124 ACTCCCTTCATCCGGAATTAC 57.160 47.619 9.01 0.00 34.32 1.89
1539 2328 5.011738 GTCATACTCCCTTCATCCGGAATTA 59.988 44.000 9.01 0.00 34.32 1.40
1540 2329 3.973973 TCATACTCCCTTCATCCGGAATT 59.026 43.478 9.01 0.00 34.32 2.17
1541 2330 3.325135 GTCATACTCCCTTCATCCGGAAT 59.675 47.826 9.01 0.00 34.32 3.01
1542 2331 2.698797 GTCATACTCCCTTCATCCGGAA 59.301 50.000 9.01 0.00 0.00 4.30
1543 2332 2.091278 AGTCATACTCCCTTCATCCGGA 60.091 50.000 6.61 6.61 0.00 5.14
1544 2333 2.320781 AGTCATACTCCCTTCATCCGG 58.679 52.381 0.00 0.00 0.00 5.14
1545 2334 5.069251 ACTTAAGTCATACTCCCTTCATCCG 59.931 44.000 1.12 0.00 0.00 4.18
1546 2335 6.487299 ACTTAAGTCATACTCCCTTCATCC 57.513 41.667 1.12 0.00 0.00 3.51
1547 2336 7.278868 CACAACTTAAGTCATACTCCCTTCATC 59.721 40.741 8.95 0.00 0.00 2.92
1548 2337 7.038302 TCACAACTTAAGTCATACTCCCTTCAT 60.038 37.037 8.95 0.00 0.00 2.57
1549 2338 6.269077 TCACAACTTAAGTCATACTCCCTTCA 59.731 38.462 8.95 0.00 0.00 3.02
1550 2339 6.590677 GTCACAACTTAAGTCATACTCCCTTC 59.409 42.308 8.95 0.00 0.00 3.46
1551 2340 6.465084 GTCACAACTTAAGTCATACTCCCTT 58.535 40.000 8.95 0.00 0.00 3.95
1552 2341 5.046520 GGTCACAACTTAAGTCATACTCCCT 60.047 44.000 8.95 0.00 0.00 4.20
1553 2342 5.176592 GGTCACAACTTAAGTCATACTCCC 58.823 45.833 8.95 0.24 0.00 4.30
1554 2343 4.863131 CGGTCACAACTTAAGTCATACTCC 59.137 45.833 8.95 7.03 0.00 3.85
1555 2344 5.572126 GTCGGTCACAACTTAAGTCATACTC 59.428 44.000 8.95 0.00 0.00 2.59
1556 2345 5.010314 TGTCGGTCACAACTTAAGTCATACT 59.990 40.000 8.95 0.00 29.30 2.12
1557 2346 5.224888 TGTCGGTCACAACTTAAGTCATAC 58.775 41.667 8.95 5.34 29.30 2.39
1562 2351 4.067972 ACATGTCGGTCACAACTTAAGT 57.932 40.909 1.12 1.12 38.97 2.24
1576 2365 1.195448 GTCAAGCTGGTCAACATGTCG 59.805 52.381 0.00 0.00 0.00 4.35
1578 2367 1.229428 CGTCAAGCTGGTCAACATGT 58.771 50.000 0.00 0.00 0.00 3.21
1584 2377 2.425592 CCCACGTCAAGCTGGTCA 59.574 61.111 0.00 0.00 0.00 4.02
1598 2391 0.707024 TTAATGACATGTGGGGCCCA 59.293 50.000 24.76 24.76 0.00 5.36
1599 2392 1.963515 GATTAATGACATGTGGGGCCC 59.036 52.381 18.17 18.17 0.00 5.80
1602 2395 6.129179 ACTTTAGGATTAATGACATGTGGGG 58.871 40.000 1.15 0.00 0.00 4.96
1616 2409 9.753674 TGATTTAAATCACTGGACTTTAGGATT 57.246 29.630 23.86 0.00 40.32 3.01
1626 2419 7.443302 AGATCCTCTGATTTAAATCACTGGA 57.557 36.000 29.95 29.95 41.60 3.86
1628 2421 6.423302 CCGAGATCCTCTGATTTAAATCACTG 59.577 42.308 23.86 18.32 40.32 3.66
1639 2432 1.327303 GCAGACCGAGATCCTCTGAT 58.673 55.000 10.14 0.00 34.46 2.90
1643 2436 0.039617 CGATGCAGACCGAGATCCTC 60.040 60.000 0.00 0.00 0.00 3.71
1652 2445 0.179062 AGGCATCTTCGATGCAGACC 60.179 55.000 24.87 11.41 46.21 3.85
1654 2447 2.011947 CAAAGGCATCTTCGATGCAGA 58.988 47.619 24.87 0.00 46.21 4.26
1659 2452 3.596214 ACGTTACAAAGGCATCTTCGAT 58.404 40.909 0.00 0.00 31.82 3.59
1661 2454 3.676172 TGTACGTTACAAAGGCATCTTCG 59.324 43.478 0.00 0.00 35.38 3.79
1663 2456 4.000988 CCTGTACGTTACAAAGGCATCTT 58.999 43.478 0.00 0.00 38.38 2.40
1747 2540 6.789262 AGATGAATAAAATGCCTTGACGAAG 58.211 36.000 0.00 0.00 0.00 3.79
1749 2542 5.006649 CGAGATGAATAAAATGCCTTGACGA 59.993 40.000 0.00 0.00 0.00 4.20
1750 2543 5.200454 CGAGATGAATAAAATGCCTTGACG 58.800 41.667 0.00 0.00 0.00 4.35
1752 2545 4.580167 CCCGAGATGAATAAAATGCCTTGA 59.420 41.667 0.00 0.00 0.00 3.02
1754 2547 3.891366 CCCCGAGATGAATAAAATGCCTT 59.109 43.478 0.00 0.00 0.00 4.35
1755 2548 3.490348 CCCCGAGATGAATAAAATGCCT 58.510 45.455 0.00 0.00 0.00 4.75
1756 2549 2.558359 CCCCCGAGATGAATAAAATGCC 59.442 50.000 0.00 0.00 0.00 4.40
1757 2550 3.923017 CCCCCGAGATGAATAAAATGC 57.077 47.619 0.00 0.00 0.00 3.56
1774 2567 2.355818 GGTACAATCAGACTTGTCCCCC 60.356 54.545 0.00 0.38 39.88 5.40
1775 2568 2.677037 CGGTACAATCAGACTTGTCCCC 60.677 54.545 0.00 4.17 39.88 4.81
1776 2569 2.618053 CGGTACAATCAGACTTGTCCC 58.382 52.381 0.00 1.28 39.88 4.46
1777 2570 2.000447 GCGGTACAATCAGACTTGTCC 59.000 52.381 0.00 4.19 39.88 4.02
1778 2571 1.654105 CGCGGTACAATCAGACTTGTC 59.346 52.381 0.00 0.00 39.88 3.18
1779 2572 1.000506 ACGCGGTACAATCAGACTTGT 59.999 47.619 12.47 0.00 41.95 3.16
1780 2573 1.654105 GACGCGGTACAATCAGACTTG 59.346 52.381 12.47 0.00 0.00 3.16
1782 2575 0.885879 TGACGCGGTACAATCAGACT 59.114 50.000 12.47 0.00 0.00 3.24
1783 2576 1.705256 TTGACGCGGTACAATCAGAC 58.295 50.000 12.47 0.00 0.00 3.51
1785 2578 2.998668 GATTGACGCGGTACAATCAG 57.001 50.000 30.89 0.00 46.38 2.90
1787 2580 2.536365 TCTGATTGACGCGGTACAATC 58.464 47.619 30.05 30.05 46.92 2.67
1789 2582 2.442212 TTCTGATTGACGCGGTACAA 57.558 45.000 12.47 14.26 0.00 2.41
1790 2583 2.063266 GTTTCTGATTGACGCGGTACA 58.937 47.619 12.47 4.78 0.00 2.90
1791 2584 2.334838 AGTTTCTGATTGACGCGGTAC 58.665 47.619 12.47 1.68 0.00 3.34
1792 2585 2.602878 GAGTTTCTGATTGACGCGGTA 58.397 47.619 12.47 0.00 0.00 4.02
1793 2586 1.429463 GAGTTTCTGATTGACGCGGT 58.571 50.000 12.47 0.00 0.00 5.68
1794 2587 0.366871 CGAGTTTCTGATTGACGCGG 59.633 55.000 12.47 0.00 33.87 6.46
1795 2588 0.366871 CCGAGTTTCTGATTGACGCG 59.633 55.000 3.53 3.53 36.56 6.01
1797 2590 2.363788 TCCCGAGTTTCTGATTGACG 57.636 50.000 0.00 0.00 0.00 4.35
1798 2591 5.642063 TGTAATTCCCGAGTTTCTGATTGAC 59.358 40.000 0.00 0.00 0.00 3.18
1800 2593 6.494893 TTGTAATTCCCGAGTTTCTGATTG 57.505 37.500 0.00 0.00 0.00 2.67
1801 2594 6.940298 TCTTTGTAATTCCCGAGTTTCTGATT 59.060 34.615 0.00 0.00 0.00 2.57
1802 2595 6.472887 TCTTTGTAATTCCCGAGTTTCTGAT 58.527 36.000 0.00 0.00 0.00 2.90
1803 2596 5.860611 TCTTTGTAATTCCCGAGTTTCTGA 58.139 37.500 0.00 0.00 0.00 3.27
1805 2598 6.996282 TCTTTCTTTGTAATTCCCGAGTTTCT 59.004 34.615 0.00 0.00 0.00 2.52
1806 2599 7.172703 TCTCTTTCTTTGTAATTCCCGAGTTTC 59.827 37.037 0.00 0.00 0.00 2.78
1808 2601 6.531021 TCTCTTTCTTTGTAATTCCCGAGTT 58.469 36.000 0.00 0.00 0.00 3.01
1809 2602 6.110411 TCTCTTTCTTTGTAATTCCCGAGT 57.890 37.500 0.00 0.00 0.00 4.18
1810 2603 8.894768 ATATCTCTTTCTTTGTAATTCCCGAG 57.105 34.615 0.00 0.00 0.00 4.63
1841 2634 8.532819 AGGCTTTGGCAGTATATAAGTATAGAC 58.467 37.037 0.00 0.00 40.87 2.59
1842 2635 8.666129 AGGCTTTGGCAGTATATAAGTATAGA 57.334 34.615 0.00 0.00 40.87 1.98
1843 2636 8.754080 AGAGGCTTTGGCAGTATATAAGTATAG 58.246 37.037 0.00 0.00 40.87 1.31
1845 2638 7.560796 AGAGGCTTTGGCAGTATATAAGTAT 57.439 36.000 0.00 0.00 40.87 2.12
1846 2639 6.996180 AGAGGCTTTGGCAGTATATAAGTA 57.004 37.500 0.00 0.00 40.87 2.24
1847 2640 5.896073 AGAGGCTTTGGCAGTATATAAGT 57.104 39.130 0.00 0.00 40.87 2.24
1848 2641 6.016777 CCAAAGAGGCTTTGGCAGTATATAAG 60.017 42.308 21.78 0.00 41.95 1.73
1865 3299 3.624777 ACCAATAGATGTGCCAAAGAGG 58.375 45.455 0.00 0.00 41.84 3.69
1866 3300 5.647658 TGTAACCAATAGATGTGCCAAAGAG 59.352 40.000 0.00 0.00 0.00 2.85
1867 3301 5.414454 GTGTAACCAATAGATGTGCCAAAGA 59.586 40.000 0.00 0.00 0.00 2.52
1868 3302 5.640732 GTGTAACCAATAGATGTGCCAAAG 58.359 41.667 0.00 0.00 0.00 2.77
1869 3303 5.637006 GTGTAACCAATAGATGTGCCAAA 57.363 39.130 0.00 0.00 0.00 3.28
1886 3320 3.073209 TGGTGGTGAAGCTAATGGTGTAA 59.927 43.478 0.00 0.00 0.00 2.41
1887 3321 2.640332 TGGTGGTGAAGCTAATGGTGTA 59.360 45.455 0.00 0.00 0.00 2.90
1888 3322 1.423541 TGGTGGTGAAGCTAATGGTGT 59.576 47.619 0.00 0.00 0.00 4.16
1889 3323 2.086869 CTGGTGGTGAAGCTAATGGTG 58.913 52.381 0.00 0.00 0.00 4.17
1890 3324 1.705186 ACTGGTGGTGAAGCTAATGGT 59.295 47.619 0.00 0.00 0.00 3.55
1892 3326 3.937814 TGTACTGGTGGTGAAGCTAATG 58.062 45.455 0.00 0.00 0.00 1.90
1895 3329 4.131596 GTTTTGTACTGGTGGTGAAGCTA 58.868 43.478 0.00 0.00 0.00 3.32
1896 3330 2.949644 GTTTTGTACTGGTGGTGAAGCT 59.050 45.455 0.00 0.00 0.00 3.74
1897 3331 2.949644 AGTTTTGTACTGGTGGTGAAGC 59.050 45.455 0.00 0.00 35.19 3.86
1898 3332 4.196193 TGAGTTTTGTACTGGTGGTGAAG 58.804 43.478 0.00 0.00 37.17 3.02
1899 3333 4.223556 TGAGTTTTGTACTGGTGGTGAA 57.776 40.909 0.00 0.00 37.17 3.18
1900 3334 3.916359 TGAGTTTTGTACTGGTGGTGA 57.084 42.857 0.00 0.00 37.17 4.02
1901 3335 4.974368 TTTGAGTTTTGTACTGGTGGTG 57.026 40.909 0.00 0.00 37.17 4.17
1902 3336 4.583073 GGATTTGAGTTTTGTACTGGTGGT 59.417 41.667 0.00 0.00 37.17 4.16
1904 3338 4.827284 AGGGATTTGAGTTTTGTACTGGTG 59.173 41.667 0.00 0.00 37.17 4.17
1905 3339 4.827284 CAGGGATTTGAGTTTTGTACTGGT 59.173 41.667 0.00 0.00 37.17 4.00
1906 3340 5.070001 TCAGGGATTTGAGTTTTGTACTGG 58.930 41.667 0.00 0.00 37.17 4.00
1907 3341 6.633500 TTCAGGGATTTGAGTTTTGTACTG 57.367 37.500 0.00 0.00 37.17 2.74
1931 3365 0.322456 TGCGCACATAGCTCCCTTTT 60.322 50.000 5.66 0.00 42.61 2.27
1933 3367 0.533755 GATGCGCACATAGCTCCCTT 60.534 55.000 14.90 0.00 42.61 3.95
1934 3368 1.070445 GATGCGCACATAGCTCCCT 59.930 57.895 14.90 0.00 42.61 4.20
1935 3369 0.948141 GAGATGCGCACATAGCTCCC 60.948 60.000 14.90 0.00 42.61 4.30
1937 3371 0.249615 TGGAGATGCGCACATAGCTC 60.250 55.000 14.90 14.33 42.61 4.09
1939 3373 2.084610 TATGGAGATGCGCACATAGC 57.915 50.000 14.90 0.00 36.35 2.97
1940 3374 4.751600 TCTTTTATGGAGATGCGCACATAG 59.248 41.667 14.90 6.45 36.35 2.23
1942 3376 3.544684 TCTTTTATGGAGATGCGCACAT 58.455 40.909 14.90 14.73 39.98 3.21
1943 3377 2.984562 TCTTTTATGGAGATGCGCACA 58.015 42.857 14.90 6.55 0.00 4.57
1945 3379 5.335113 GCAATATCTTTTATGGAGATGCGCA 60.335 40.000 14.96 14.96 35.56 6.09
1947 3381 5.413833 AGGCAATATCTTTTATGGAGATGCG 59.586 40.000 0.00 0.00 35.56 4.73
1950 3384 6.045931 TGGGAGGCAATATCTTTTATGGAGAT 59.954 38.462 0.00 0.00 37.59 2.75
1952 3386 5.474876 GTGGGAGGCAATATCTTTTATGGAG 59.525 44.000 0.00 0.00 0.00 3.86
1965 4478 1.135094 ATCGATCAGTGGGAGGCAAT 58.865 50.000 0.00 0.00 0.00 3.56
1966 4479 0.911769 AATCGATCAGTGGGAGGCAA 59.088 50.000 0.00 0.00 0.00 4.52
1967 4480 1.788229 TAATCGATCAGTGGGAGGCA 58.212 50.000 0.00 0.00 0.00 4.75
1978 4491 5.060662 TGGAACCGAGATGATAATCGATC 57.939 43.478 0.00 0.00 41.40 3.69
1979 4492 5.468540 TTGGAACCGAGATGATAATCGAT 57.531 39.130 0.00 0.00 41.40 3.59
1981 4494 3.430218 GCTTGGAACCGAGATGATAATCG 59.570 47.826 11.87 0.00 38.65 3.34
1982 4495 4.636249 AGCTTGGAACCGAGATGATAATC 58.364 43.478 11.87 0.00 0.00 1.75
1984 4497 4.081142 TCAAGCTTGGAACCGAGATGATAA 60.081 41.667 25.73 0.00 0.00 1.75
1985 4498 3.450817 TCAAGCTTGGAACCGAGATGATA 59.549 43.478 25.73 0.00 0.00 2.15
1986 4499 2.237143 TCAAGCTTGGAACCGAGATGAT 59.763 45.455 25.73 0.00 0.00 2.45
1990 7195 0.756294 TGTCAAGCTTGGAACCGAGA 59.244 50.000 25.73 1.32 0.00 4.04
1994 7199 2.162408 GCAGTATGTCAAGCTTGGAACC 59.838 50.000 25.73 12.02 39.31 3.62
1996 7201 2.436417 GGCAGTATGTCAAGCTTGGAA 58.564 47.619 25.73 14.73 43.01 3.53
1997 7202 2.113860 GGCAGTATGTCAAGCTTGGA 57.886 50.000 25.73 13.50 43.01 3.53
2007 7212 5.648092 GGAAAGTGATTACTTGGCAGTATGT 59.352 40.000 3.30 0.00 46.14 2.29
2008 7213 5.647658 TGGAAAGTGATTACTTGGCAGTATG 59.352 40.000 3.30 0.00 46.14 2.39
2009 7214 5.815581 TGGAAAGTGATTACTTGGCAGTAT 58.184 37.500 3.30 0.00 46.14 2.12
2010 7215 5.235850 TGGAAAGTGATTACTTGGCAGTA 57.764 39.130 3.30 0.00 46.14 2.74
2016 7221 3.820467 TGGTGCTGGAAAGTGATTACTTG 59.180 43.478 3.30 0.00 46.14 3.16
2018 7223 3.181445 TGTGGTGCTGGAAAGTGATTACT 60.181 43.478 0.00 0.00 39.32 2.24
2024 7229 1.648720 CGTGTGGTGCTGGAAAGTG 59.351 57.895 0.00 0.00 0.00 3.16
2025 7230 1.525995 CCGTGTGGTGCTGGAAAGT 60.526 57.895 0.00 0.00 0.00 2.66
2026 7231 2.260869 CCCGTGTGGTGCTGGAAAG 61.261 63.158 0.00 0.00 0.00 2.62
2027 7232 2.203280 CCCGTGTGGTGCTGGAAA 60.203 61.111 0.00 0.00 0.00 3.13
2028 7233 4.263572 CCCCGTGTGGTGCTGGAA 62.264 66.667 0.00 0.00 0.00 3.53
2030 7235 2.684192 TTTACCCCGTGTGGTGCTGG 62.684 60.000 0.00 0.00 39.53 4.85
2032 7237 0.820482 GTTTTACCCCGTGTGGTGCT 60.820 55.000 0.00 0.00 39.53 4.40
2034 7239 2.333291 GGTTTTACCCCGTGTGGTG 58.667 57.895 0.00 0.00 39.53 4.17
2035 7240 4.905240 GGTTTTACCCCGTGTGGT 57.095 55.556 0.00 0.00 42.62 4.16
2045 7250 2.223745 TGCGAGGAACAAGGGTTTTAC 58.776 47.619 0.00 0.00 37.36 2.01
2046 7251 2.642154 TGCGAGGAACAAGGGTTTTA 57.358 45.000 0.00 0.00 37.36 1.52
2047 7252 1.681264 CTTGCGAGGAACAAGGGTTTT 59.319 47.619 0.00 0.00 40.68 2.43
2048 7253 1.318576 CTTGCGAGGAACAAGGGTTT 58.681 50.000 0.00 0.00 40.68 3.27
2049 7254 1.172812 GCTTGCGAGGAACAAGGGTT 61.173 55.000 2.37 0.00 43.81 4.11
2050 7255 1.600916 GCTTGCGAGGAACAAGGGT 60.601 57.895 2.37 0.00 43.81 4.34
2051 7256 1.580845 CTGCTTGCGAGGAACAAGGG 61.581 60.000 2.37 0.00 43.81 3.95
2052 7257 0.886490 ACTGCTTGCGAGGAACAAGG 60.886 55.000 2.37 0.00 43.81 3.61
2053 7258 0.236711 CACTGCTTGCGAGGAACAAG 59.763 55.000 2.37 0.00 45.88 3.16
2054 7259 1.785041 GCACTGCTTGCGAGGAACAA 61.785 55.000 2.37 0.00 42.79 2.83
2055 7260 2.253758 GCACTGCTTGCGAGGAACA 61.254 57.895 2.37 0.00 42.79 3.18
2056 7261 2.558313 GCACTGCTTGCGAGGAAC 59.442 61.111 2.37 0.00 42.79 3.62
2064 7269 2.095567 GGATGTTGTACTGCACTGCTTG 60.096 50.000 1.98 0.00 0.00 4.01
2065 7270 2.154462 GGATGTTGTACTGCACTGCTT 58.846 47.619 1.98 0.00 0.00 3.91
2066 7271 1.611673 GGGATGTTGTACTGCACTGCT 60.612 52.381 1.98 0.00 0.00 4.24
2067 7272 0.804989 GGGATGTTGTACTGCACTGC 59.195 55.000 0.00 0.00 0.00 4.40
2068 7273 2.479566 AGGGATGTTGTACTGCACTG 57.520 50.000 0.00 0.00 0.00 3.66
2069 7274 2.903784 TGTAGGGATGTTGTACTGCACT 59.096 45.455 0.00 0.00 0.00 4.40
2070 7275 3.328382 TGTAGGGATGTTGTACTGCAC 57.672 47.619 0.00 0.00 0.00 4.57
2071 7276 3.868369 GCTTGTAGGGATGTTGTACTGCA 60.868 47.826 0.00 0.00 0.00 4.41
2072 7277 2.678336 GCTTGTAGGGATGTTGTACTGC 59.322 50.000 0.00 0.00 0.00 4.40
2073 7278 3.270877 GGCTTGTAGGGATGTTGTACTG 58.729 50.000 0.00 0.00 0.00 2.74
2074 7279 2.910319 TGGCTTGTAGGGATGTTGTACT 59.090 45.455 0.00 0.00 0.00 2.73
2075 7280 3.343941 TGGCTTGTAGGGATGTTGTAC 57.656 47.619 0.00 0.00 0.00 2.90
2076 7281 3.521531 TGATGGCTTGTAGGGATGTTGTA 59.478 43.478 0.00 0.00 0.00 2.41
2077 7282 2.308570 TGATGGCTTGTAGGGATGTTGT 59.691 45.455 0.00 0.00 0.00 3.32
2078 7283 2.947652 CTGATGGCTTGTAGGGATGTTG 59.052 50.000 0.00 0.00 0.00 3.33
2079 7284 2.578021 ACTGATGGCTTGTAGGGATGTT 59.422 45.455 0.00 0.00 0.00 2.71
2080 7285 2.200081 ACTGATGGCTTGTAGGGATGT 58.800 47.619 0.00 0.00 0.00 3.06
2081 7286 3.209410 GAACTGATGGCTTGTAGGGATG 58.791 50.000 0.00 0.00 0.00 3.51
2082 7287 2.158900 CGAACTGATGGCTTGTAGGGAT 60.159 50.000 0.00 0.00 0.00 3.85
2083 7288 1.207089 CGAACTGATGGCTTGTAGGGA 59.793 52.381 0.00 0.00 0.00 4.20
2084 7289 1.207089 TCGAACTGATGGCTTGTAGGG 59.793 52.381 0.00 0.00 0.00 3.53
2085 7290 2.672961 TCGAACTGATGGCTTGTAGG 57.327 50.000 0.00 0.00 0.00 3.18
2095 7300 3.366396 AGACCTACACCATCGAACTGAT 58.634 45.455 0.00 0.00 38.01 2.90
2096 7301 2.753452 GAGACCTACACCATCGAACTGA 59.247 50.000 0.00 0.00 0.00 3.41
2097 7302 2.492088 TGAGACCTACACCATCGAACTG 59.508 50.000 0.00 0.00 0.00 3.16
2098 7303 2.803956 TGAGACCTACACCATCGAACT 58.196 47.619 0.00 0.00 0.00 3.01
2099 7304 3.587797 TTGAGACCTACACCATCGAAC 57.412 47.619 0.00 0.00 0.00 3.95
2100 7305 3.616560 GCTTTGAGACCTACACCATCGAA 60.617 47.826 0.00 0.00 0.00 3.71
2101 7306 2.094182 GCTTTGAGACCTACACCATCGA 60.094 50.000 0.00 0.00 0.00 3.59
2102 7307 2.271800 GCTTTGAGACCTACACCATCG 58.728 52.381 0.00 0.00 0.00 3.84
2103 7308 3.334583 TGCTTTGAGACCTACACCATC 57.665 47.619 0.00 0.00 0.00 3.51
2104 7309 3.614092 CATGCTTTGAGACCTACACCAT 58.386 45.455 0.00 0.00 0.00 3.55
2105 7310 2.875672 GCATGCTTTGAGACCTACACCA 60.876 50.000 11.37 0.00 0.00 4.17
2106 7311 1.740025 GCATGCTTTGAGACCTACACC 59.260 52.381 11.37 0.00 0.00 4.16
2107 7312 2.417933 CAGCATGCTTTGAGACCTACAC 59.582 50.000 19.98 0.00 0.00 2.90
2108 7313 2.038952 ACAGCATGCTTTGAGACCTACA 59.961 45.455 19.98 0.00 42.53 2.74
2109 7314 2.704572 ACAGCATGCTTTGAGACCTAC 58.295 47.619 19.98 0.00 42.53 3.18
2110 7315 4.760530 ATACAGCATGCTTTGAGACCTA 57.239 40.909 19.98 0.00 42.53 3.08
2111 7316 3.641434 ATACAGCATGCTTTGAGACCT 57.359 42.857 19.98 0.00 42.53 3.85
2112 7317 6.382869 AAATATACAGCATGCTTTGAGACC 57.617 37.500 19.98 0.00 42.53 3.85
2117 7322 9.398170 GGTGTAATAAATATACAGCATGCTTTG 57.602 33.333 19.98 11.80 42.53 2.77
2118 7323 8.289618 CGGTGTAATAAATATACAGCATGCTTT 58.710 33.333 19.98 15.50 42.53 3.51
2119 7324 7.659799 TCGGTGTAATAAATATACAGCATGCTT 59.340 33.333 19.98 12.30 42.53 3.91
2120 7325 7.158697 TCGGTGTAATAAATATACAGCATGCT 58.841 34.615 16.30 16.30 42.53 3.79
2121 7326 7.359262 TCGGTGTAATAAATATACAGCATGC 57.641 36.000 10.51 10.51 42.53 4.06
2122 7327 7.331934 AGCTCGGTGTAATAAATATACAGCATG 59.668 37.037 14.02 8.07 40.88 4.06
2123 7328 7.331934 CAGCTCGGTGTAATAAATATACAGCAT 59.668 37.037 14.02 0.00 40.88 3.79
2124 7329 6.645003 CAGCTCGGTGTAATAAATATACAGCA 59.355 38.462 14.02 3.55 40.88 4.41
2125 7330 6.645415 ACAGCTCGGTGTAATAAATATACAGC 59.355 38.462 0.00 5.96 38.43 4.40
2126 7331 7.865889 TGACAGCTCGGTGTAATAAATATACAG 59.134 37.037 1.28 0.00 0.00 2.74
2127 7332 7.718525 TGACAGCTCGGTGTAATAAATATACA 58.281 34.615 1.28 0.00 0.00 2.29
2128 7333 7.328737 CCTGACAGCTCGGTGTAATAAATATAC 59.671 40.741 1.28 0.00 0.00 1.47
2129 7334 7.231925 TCCTGACAGCTCGGTGTAATAAATATA 59.768 37.037 1.28 0.00 0.00 0.86
2130 7335 6.041637 TCCTGACAGCTCGGTGTAATAAATAT 59.958 38.462 1.28 0.00 0.00 1.28
2131 7336 5.361571 TCCTGACAGCTCGGTGTAATAAATA 59.638 40.000 1.28 0.00 0.00 1.40
2132 7337 4.161565 TCCTGACAGCTCGGTGTAATAAAT 59.838 41.667 1.28 0.00 0.00 1.40
2133 7338 3.512329 TCCTGACAGCTCGGTGTAATAAA 59.488 43.478 1.28 0.00 0.00 1.40
2134 7339 3.093814 TCCTGACAGCTCGGTGTAATAA 58.906 45.455 1.28 0.00 0.00 1.40
2135 7340 2.730382 TCCTGACAGCTCGGTGTAATA 58.270 47.619 1.28 0.00 0.00 0.98
2136 7341 1.557099 TCCTGACAGCTCGGTGTAAT 58.443 50.000 1.28 0.00 0.00 1.89
2137 7342 1.334160 TTCCTGACAGCTCGGTGTAA 58.666 50.000 1.28 0.00 0.00 2.41
2138 7343 1.557099 ATTCCTGACAGCTCGGTGTA 58.443 50.000 1.28 0.00 0.00 2.90
2139 7344 0.687354 AATTCCTGACAGCTCGGTGT 59.313 50.000 0.81 0.81 0.00 4.16
2140 7345 1.081892 CAATTCCTGACAGCTCGGTG 58.918 55.000 0.00 0.00 0.00 4.94
2141 7346 0.976641 TCAATTCCTGACAGCTCGGT 59.023 50.000 0.00 0.00 0.00 4.69
2142 7347 3.840831 TCAATTCCTGACAGCTCGG 57.159 52.632 0.00 0.00 0.00 4.63
2150 7355 2.582172 ACCCATGATGGTCAATTCCTGA 59.418 45.455 11.09 0.00 35.17 3.86
2151 7356 3.022557 ACCCATGATGGTCAATTCCTG 57.977 47.619 11.09 0.00 35.17 3.86
2152 7357 3.270433 AGAACCCATGATGGTCAATTCCT 59.730 43.478 11.09 0.00 37.76 3.36
2153 7358 3.633986 GAGAACCCATGATGGTCAATTCC 59.366 47.826 11.09 0.77 37.76 3.01
2154 7359 4.096984 GTGAGAACCCATGATGGTCAATTC 59.903 45.833 11.09 8.50 37.76 2.17
2155 7360 4.019174 GTGAGAACCCATGATGGTCAATT 58.981 43.478 11.09 0.00 37.76 2.32
2156 7361 3.624777 GTGAGAACCCATGATGGTCAAT 58.375 45.455 11.09 0.00 37.76 2.57
2157 7362 2.290896 GGTGAGAACCCATGATGGTCAA 60.291 50.000 11.09 0.00 37.76 3.18
2158 7363 1.281867 GGTGAGAACCCATGATGGTCA 59.718 52.381 11.09 4.55 37.76 4.02
2159 7364 1.281867 TGGTGAGAACCCATGATGGTC 59.718 52.381 11.09 2.18 37.76 4.02
2160 7365 1.004745 GTGGTGAGAACCCATGATGGT 59.995 52.381 11.09 0.00 41.55 3.55
2161 7366 1.283029 AGTGGTGAGAACCCATGATGG 59.717 52.381 3.98 3.98 37.25 3.51
2162 7367 2.238144 AGAGTGGTGAGAACCCATGATG 59.762 50.000 0.00 0.00 33.76 3.07
2163 7368 2.503356 GAGAGTGGTGAGAACCCATGAT 59.497 50.000 0.00 0.00 33.76 2.45
2164 7369 1.902508 GAGAGTGGTGAGAACCCATGA 59.097 52.381 0.00 0.00 33.76 3.07
2165 7370 1.905215 AGAGAGTGGTGAGAACCCATG 59.095 52.381 0.00 0.00 33.76 3.66
2166 7371 2.183679 GAGAGAGTGGTGAGAACCCAT 58.816 52.381 0.00 0.00 33.76 4.00
2167 7372 1.633774 GAGAGAGTGGTGAGAACCCA 58.366 55.000 0.00 0.00 0.00 4.51
2168 7373 0.899019 GGAGAGAGTGGTGAGAACCC 59.101 60.000 0.00 0.00 0.00 4.11
2169 7374 1.548269 CTGGAGAGAGTGGTGAGAACC 59.452 57.143 0.00 0.00 0.00 3.62
2170 7375 1.548269 CCTGGAGAGAGTGGTGAGAAC 59.452 57.143 0.00 0.00 0.00 3.01
2171 7376 1.551099 CCCTGGAGAGAGTGGTGAGAA 60.551 57.143 0.00 0.00 0.00 2.87
2172 7377 0.040351 CCCTGGAGAGAGTGGTGAGA 59.960 60.000 0.00 0.00 0.00 3.27
2173 7378 1.612395 GCCCTGGAGAGAGTGGTGAG 61.612 65.000 0.00 0.00 0.00 3.51
2174 7379 1.610673 GCCCTGGAGAGAGTGGTGA 60.611 63.158 0.00 0.00 0.00 4.02
2175 7380 2.664081 GGCCCTGGAGAGAGTGGTG 61.664 68.421 0.00 0.00 0.00 4.17
2176 7381 2.284995 GGCCCTGGAGAGAGTGGT 60.285 66.667 0.00 0.00 0.00 4.16
2177 7382 3.465403 CGGCCCTGGAGAGAGTGG 61.465 72.222 0.00 0.00 0.00 4.00
2178 7383 2.681778 ACGGCCCTGGAGAGAGTG 60.682 66.667 0.00 0.00 0.00 3.51
2179 7384 2.363147 GACGGCCCTGGAGAGAGT 60.363 66.667 0.00 0.00 0.00 3.24
2180 7385 2.043450 AGACGGCCCTGGAGAGAG 60.043 66.667 0.00 0.00 0.00 3.20
2181 7386 2.043852 GAGACGGCCCTGGAGAGA 60.044 66.667 0.00 0.00 0.00 3.10
2182 7387 3.151022 GGAGACGGCCCTGGAGAG 61.151 72.222 0.00 0.00 0.00 3.20
2183 7388 3.965026 CTGGAGACGGCCCTGGAGA 62.965 68.421 0.00 0.00 0.00 3.71
2184 7389 3.465403 CTGGAGACGGCCCTGGAG 61.465 72.222 0.00 0.00 0.00 3.86
2187 7392 1.915078 AATTCCTGGAGACGGCCCTG 61.915 60.000 0.00 0.00 34.42 4.45
2188 7393 1.208165 AAATTCCTGGAGACGGCCCT 61.208 55.000 0.00 0.00 34.42 5.19
2189 7394 1.032114 CAAATTCCTGGAGACGGCCC 61.032 60.000 0.00 0.00 34.42 5.80
2190 7395 1.032114 CCAAATTCCTGGAGACGGCC 61.032 60.000 0.00 0.00 38.96 6.13
2191 7396 1.032114 CCCAAATTCCTGGAGACGGC 61.032 60.000 0.00 0.00 38.96 5.68
2192 7397 0.394352 CCCCAAATTCCTGGAGACGG 60.394 60.000 0.00 0.00 38.96 4.79
2193 7398 0.394352 CCCCCAAATTCCTGGAGACG 60.394 60.000 0.00 0.00 38.96 4.18
2194 7399 0.684479 GCCCCCAAATTCCTGGAGAC 60.684 60.000 0.00 0.00 38.96 3.36
2195 7400 1.697297 GCCCCCAAATTCCTGGAGA 59.303 57.895 0.00 0.00 38.96 3.71
2196 7401 1.381735 GGCCCCCAAATTCCTGGAG 60.382 63.158 0.00 0.00 38.96 3.86
2197 7402 2.777146 GGCCCCCAAATTCCTGGA 59.223 61.111 0.00 0.00 38.96 3.86
2198 7403 2.365502 GGGCCCCCAAATTCCTGG 60.366 66.667 12.23 0.00 36.10 4.45
2199 7404 2.759560 CGGGCCCCCAAATTCCTG 60.760 66.667 18.66 0.00 35.37 3.86
2200 7405 4.074408 CCGGGCCCCCAAATTCCT 62.074 66.667 18.66 0.00 35.37 3.36
2202 7407 4.068887 TCCCGGGCCCCCAAATTC 62.069 66.667 18.49 0.00 35.37 2.17
2203 7408 4.392166 GTCCCGGGCCCCCAAATT 62.392 66.667 18.49 0.00 35.37 1.82
2209 7414 3.481999 TATTTCGTCCCGGGCCCC 61.482 66.667 18.49 4.93 0.00 5.80
2210 7415 2.203112 GTATTTCGTCCCGGGCCC 60.203 66.667 18.49 13.57 0.00 5.80
2211 7416 0.677414 TTTGTATTTCGTCCCGGGCC 60.677 55.000 18.49 2.05 0.00 5.80
2212 7417 1.166989 TTTTGTATTTCGTCCCGGGC 58.833 50.000 18.49 10.58 0.00 6.13
2213 7418 2.815503 ACTTTTTGTATTTCGTCCCGGG 59.184 45.455 16.85 16.85 0.00 5.73
2214 7419 3.365565 CCACTTTTTGTATTTCGTCCCGG 60.366 47.826 0.00 0.00 0.00 5.73
2215 7420 3.365565 CCCACTTTTTGTATTTCGTCCCG 60.366 47.826 0.00 0.00 0.00 5.14
2216 7421 3.057104 CCCCACTTTTTGTATTTCGTCCC 60.057 47.826 0.00 0.00 0.00 4.46
2217 7422 3.570975 ACCCCACTTTTTGTATTTCGTCC 59.429 43.478 0.00 0.00 0.00 4.79
2218 7423 4.841443 ACCCCACTTTTTGTATTTCGTC 57.159 40.909 0.00 0.00 0.00 4.20
2219 7424 4.891168 AGAACCCCACTTTTTGTATTTCGT 59.109 37.500 0.00 0.00 0.00 3.85
2220 7425 5.447624 AGAACCCCACTTTTTGTATTTCG 57.552 39.130 0.00 0.00 0.00 3.46
2221 7426 9.772973 ATTTTAGAACCCCACTTTTTGTATTTC 57.227 29.630 0.00 0.00 0.00 2.17
2226 7431 9.961264 TTAAAATTTTAGAACCCCACTTTTTGT 57.039 25.926 10.40 0.00 0.00 2.83
2232 7437 9.483916 CGAATTTTAAAATTTTAGAACCCCACT 57.516 29.630 23.44 0.43 38.64 4.00
2233 7438 9.263538 ACGAATTTTAAAATTTTAGAACCCCAC 57.736 29.630 23.44 8.47 38.64 4.61
2256 7461 9.412460 TCCTTGGATACTTCTTTAGTTATACGA 57.588 33.333 0.00 0.00 38.33 3.43
2274 7479 9.458727 CACTGCAATATAAGATATTCCTTGGAT 57.541 33.333 0.00 0.00 0.00 3.41
2275 7480 7.884877 CCACTGCAATATAAGATATTCCTTGGA 59.115 37.037 0.00 0.00 0.00 3.53
2276 7481 7.362401 GCCACTGCAATATAAGATATTCCTTGG 60.362 40.741 0.00 0.00 37.47 3.61
2277 7482 7.362401 GGCCACTGCAATATAAGATATTCCTTG 60.362 40.741 0.00 0.00 40.13 3.61
2278 7483 6.660949 GGCCACTGCAATATAAGATATTCCTT 59.339 38.462 0.00 0.00 40.13 3.36
2279 7484 6.183347 GGCCACTGCAATATAAGATATTCCT 58.817 40.000 0.00 0.00 40.13 3.36
2280 7485 5.945784 TGGCCACTGCAATATAAGATATTCC 59.054 40.000 0.00 0.00 40.13 3.01
2281 7486 7.452880 TTGGCCACTGCAATATAAGATATTC 57.547 36.000 3.88 0.00 40.13 1.75
2282 7487 7.838079 TTTGGCCACTGCAATATAAGATATT 57.162 32.000 3.88 0.00 40.13 1.28
2283 7488 9.532494 TTATTTGGCCACTGCAATATAAGATAT 57.468 29.630 3.88 0.00 40.13 1.63
2284 7489 8.932434 TTATTTGGCCACTGCAATATAAGATA 57.068 30.769 3.88 0.00 40.13 1.98
2285 7490 7.838079 TTATTTGGCCACTGCAATATAAGAT 57.162 32.000 3.88 0.00 40.13 2.40
2286 7491 7.838079 ATTATTTGGCCACTGCAATATAAGA 57.162 32.000 3.88 0.00 40.13 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.