Multiple sequence alignment - TraesCS5A01G044500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G044500 chr5A 100.000 5002 0 0 1 5002 40840237 40835236 0.000000e+00 9238.0
1 TraesCS5A01G044500 chr5A 88.636 308 31 4 4505 4810 150587667 150587972 6.120000e-99 372.0
2 TraesCS5A01G044500 chr5D 93.778 1350 60 9 3172 4506 51810692 51809352 0.000000e+00 2006.0
3 TraesCS5A01G044500 chr5D 96.654 807 17 5 1734 2535 51812345 51811544 0.000000e+00 1332.0
4 TraesCS5A01G044500 chr5D 96.264 803 21 2 948 1750 51813154 51812361 0.000000e+00 1308.0
5 TraesCS5A01G044500 chr5D 95.525 648 26 2 2530 3174 51811466 51810819 0.000000e+00 1033.0
6 TraesCS5A01G044500 chr5D 90.694 634 43 10 262 892 51837461 51836841 0.000000e+00 830.0
7 TraesCS5A01G044500 chr5D 100.000 58 0 0 4945 5002 51809361 51809304 1.900000e-19 108.0
8 TraesCS5A01G044500 chr5D 76.652 227 26 15 2028 2248 289080791 289080586 3.190000e-17 100.0
9 TraesCS5A01G044500 chr5B 86.877 1265 116 19 1743 2991 54715969 54714739 0.000000e+00 1371.0
10 TraesCS5A01G044500 chr5B 96.707 334 11 0 1020 1353 54716919 54716586 1.570000e-154 556.0
11 TraesCS5A01G044500 chr5B 87.500 304 36 2 4505 4808 695034481 695034180 2.870000e-92 350.0
12 TraesCS5A01G044500 chr5B 87.171 304 37 2 4505 4808 694775690 694775389 1.330000e-90 344.0
13 TraesCS5A01G044500 chr5B 86.842 304 38 2 4505 4808 694948853 694948552 6.200000e-89 339.0
14 TraesCS5A01G044500 chr5B 86.842 304 38 2 4505 4808 695324839 695324538 6.200000e-89 339.0
15 TraesCS5A01G044500 chr5B 86.513 304 39 2 4505 4808 695016576 695016275 2.890000e-87 333.0
16 TraesCS5A01G044500 chr5B 86.184 304 40 2 4505 4808 695239486 695239185 1.340000e-85 327.0
17 TraesCS5A01G044500 chr5B 86.184 304 40 2 4505 4808 695253769 695253468 1.340000e-85 327.0
18 TraesCS5A01G044500 chr5B 87.313 268 17 8 3587 3839 54712976 54712711 1.760000e-74 291.0
19 TraesCS5A01G044500 chr5B 89.677 155 15 1 3979 4133 54712456 54712303 3.950000e-46 196.0
20 TraesCS5A01G044500 chr5B 83.226 155 14 5 2087 2232 328373952 328373801 1.130000e-26 132.0
21 TraesCS5A01G044500 chr4A 80.673 1159 133 37 2250 3346 586440632 586441761 0.000000e+00 815.0
22 TraesCS5A01G044500 chr4A 87.923 414 35 11 940 1353 586439454 586439852 1.630000e-129 473.0
23 TraesCS5A01G044500 chr4A 78.545 536 75 19 3535 4041 586441853 586442377 2.910000e-82 316.0
24 TraesCS5A01G044500 chr4A 83.333 132 14 7 4200 4324 586444457 586444587 1.140000e-21 115.0
25 TraesCS5A01G044500 chr4D 79.443 1148 135 51 2250 3346 14985883 14984786 0.000000e+00 719.0
26 TraesCS5A01G044500 chr4D 86.386 404 32 16 947 1346 14987026 14986642 2.150000e-113 420.0
27 TraesCS5A01G044500 chr4D 82.065 368 51 10 3648 4004 14984657 14984294 2.930000e-77 300.0
28 TraesCS5A01G044500 chr4D 88.060 134 14 2 4812 4944 314432377 314432245 1.860000e-34 158.0
29 TraesCS5A01G044500 chr4D 86.861 137 16 2 4810 4945 335746178 335746043 8.670000e-33 152.0
30 TraesCS5A01G044500 chr4D 81.522 92 13 2 2 91 34079489 34079578 6.950000e-09 73.1
31 TraesCS5A01G044500 chr4B 83.333 726 91 13 2642 3346 24856870 24857586 1.170000e-180 643.0
32 TraesCS5A01G044500 chr4B 83.248 585 85 9 2766 3346 25265238 25264663 4.440000e-145 525.0
33 TraesCS5A01G044500 chr4B 89.831 354 23 9 998 1348 24855476 24855819 4.600000e-120 442.0
34 TraesCS5A01G044500 chr4B 89.174 351 25 8 998 1348 25266911 25266574 4.630000e-115 425.0
35 TraesCS5A01G044500 chr4B 78.508 563 77 25 3535 4064 24857678 24858229 3.730000e-86 329.0
36 TraesCS5A01G044500 chr4B 79.452 511 53 24 2250 2728 25265844 25265354 1.050000e-81 315.0
37 TraesCS5A01G044500 chr4B 79.286 420 66 13 3647 4050 25264287 25263873 1.770000e-69 274.0
38 TraesCS5A01G044500 chr4B 83.456 272 33 7 2250 2511 24856515 24856784 5.000000e-60 243.0
39 TraesCS5A01G044500 chr4B 86.667 135 18 0 4810 4944 578067457 578067591 3.120000e-32 150.0
40 TraesCS5A01G044500 chr4B 88.776 98 8 2 2924 3019 24853085 24853181 3.160000e-22 117.0
41 TraesCS5A01G044500 chr4B 88.095 84 6 4 4200 4280 25263486 25263404 4.120000e-16 97.1
42 TraesCS5A01G044500 chr3D 86.957 299 37 2 4510 4808 563410923 563410627 8.020000e-88 335.0
43 TraesCS5A01G044500 chr3D 82.222 90 16 0 2 91 79303406 79303317 1.490000e-10 78.7
44 TraesCS5A01G044500 chrUn 79.873 472 65 17 4501 4945 32282803 32283271 8.080000e-83 318.0
45 TraesCS5A01G044500 chr2D 88.235 136 14 2 4810 4944 32343850 32343984 1.440000e-35 161.0
46 TraesCS5A01G044500 chr2D 86.957 138 17 1 4809 4945 447222370 447222507 2.410000e-33 154.0
47 TraesCS5A01G044500 chr2D 83.969 131 13 5 2110 2240 39495637 39495759 8.800000e-23 119.0
48 TraesCS5A01G044500 chr2A 88.060 134 15 1 4810 4943 42334729 42334597 1.860000e-34 158.0
49 TraesCS5A01G044500 chr2A 90.385 52 1 3 50 97 487366402 487366453 1.160000e-06 65.8
50 TraesCS5A01G044500 chr1D 87.407 135 17 0 4810 4944 162984168 162984034 6.700000e-34 156.0
51 TraesCS5A01G044500 chr1D 79.470 151 18 8 2033 2181 317438177 317438316 1.480000e-15 95.3
52 TraesCS5A01G044500 chr1B 86.957 138 18 0 4810 4947 281089287 281089150 6.700000e-34 156.0
53 TraesCS5A01G044500 chr7D 77.477 222 31 13 2028 2247 561513473 561513269 1.140000e-21 115.0
54 TraesCS5A01G044500 chr7D 76.074 163 31 7 314 470 550837933 550837773 1.490000e-10 78.7
55 TraesCS5A01G044500 chr2B 82.143 140 16 6 2110 2249 88178101 88177971 1.470000e-20 111.0
56 TraesCS5A01G044500 chr2B 85.714 91 11 2 2 91 424114954 424115043 1.480000e-15 95.3
57 TraesCS5A01G044500 chr2B 83.333 90 15 0 2 91 254881101 254881012 3.210000e-12 84.2
58 TraesCS5A01G044500 chr6B 88.764 89 10 0 4 92 648847004 648846916 5.290000e-20 110.0
59 TraesCS5A01G044500 chr6B 88.764 89 10 0 4 92 648883245 648883157 5.290000e-20 110.0
60 TraesCS5A01G044500 chr7B 78.395 162 25 9 2088 2247 158367057 158366904 4.120000e-16 97.1
61 TraesCS5A01G044500 chr3B 87.654 81 8 2 2091 2170 454716243 454716164 5.330000e-15 93.5
62 TraesCS5A01G044500 chr3B 82.979 94 15 1 2 95 806179448 806179356 3.210000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G044500 chr5A 40835236 40840237 5001 True 9238.000000 9238 100.000000 1 5002 1 chr5A.!!$R1 5001
1 TraesCS5A01G044500 chr5D 51809304 51813154 3850 True 1157.400000 2006 96.444200 948 5002 5 chr5D.!!$R3 4054
2 TraesCS5A01G044500 chr5D 51836841 51837461 620 True 830.000000 830 90.694000 262 892 1 chr5D.!!$R1 630
3 TraesCS5A01G044500 chr5B 54712303 54716919 4616 True 603.500000 1371 90.143500 1020 4133 4 chr5B.!!$R9 3113
4 TraesCS5A01G044500 chr4A 586439454 586444587 5133 False 429.750000 815 82.618500 940 4324 4 chr4A.!!$F1 3384
5 TraesCS5A01G044500 chr4D 14984294 14987026 2732 True 479.666667 719 82.631333 947 4004 3 chr4D.!!$R3 3057
6 TraesCS5A01G044500 chr4B 24853085 24858229 5144 False 354.800000 643 84.780800 998 4064 5 chr4B.!!$F2 3066
7 TraesCS5A01G044500 chr4B 25263404 25266911 3507 True 327.220000 525 83.851000 998 4280 5 chr4B.!!$R1 3282

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
973 977 0.027848 GAGACGTCCCGAATCTCGAC 59.972 60.000 13.01 0.00 43.74 4.20 F
977 981 1.153901 GTCCCGAATCTCGACGCAA 60.154 57.895 0.00 0.00 43.74 4.85 F
2658 4591 1.136000 TGATGCGACAACATTGCTTCG 60.136 47.619 0.00 1.44 42.41 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2658 4591 1.896220 TGACCCAACTGCTTGATCAC 58.104 50.0 0.0 0.0 0.0 3.06 R
2772 4792 5.350365 CCATTTGCAATTCTCCACTGATTTG 59.650 40.0 0.0 0.0 33.2 2.32 R
4181 9663 0.040067 GCCAGCTTTGCCGCATATAC 60.040 55.0 0.0 0.0 0.0 1.47 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 8.871686 AAATTTAAGTTCTAACTTTGGCACAG 57.128 30.769 12.96 0.00 46.52 3.66
53 54 7.817418 ATTTAAGTTCTAACTTTGGCACAGA 57.183 32.000 12.96 0.00 46.52 3.41
54 55 7.633193 TTTAAGTTCTAACTTTGGCACAGAA 57.367 32.000 12.96 0.00 46.52 3.02
55 56 7.817418 TTAAGTTCTAACTTTGGCACAGAAT 57.183 32.000 12.96 0.00 46.52 2.40
56 57 8.911918 TTAAGTTCTAACTTTGGCACAGAATA 57.088 30.769 12.96 0.00 46.52 1.75
57 58 9.515226 TTAAGTTCTAACTTTGGCACAGAATAT 57.485 29.630 12.96 0.00 46.52 1.28
59 60 9.515226 AAGTTCTAACTTTGGCACAGAATATAA 57.485 29.630 7.81 0.00 46.52 0.98
63 64 8.956426 TCTAACTTTGGCACAGAATATAAAAGG 58.044 33.333 7.81 0.00 42.39 3.11
65 66 6.252995 ACTTTGGCACAGAATATAAAAGGGA 58.747 36.000 7.81 0.00 42.39 4.20
66 67 6.152831 ACTTTGGCACAGAATATAAAAGGGAC 59.847 38.462 7.81 0.00 42.39 4.46
67 68 5.826643 TTGGCACAGAATATAAAAGGGACT 58.173 37.500 0.00 0.00 42.39 3.85
68 69 6.569127 TGGCACAGAATATAAAAGGGACTA 57.431 37.500 0.00 0.00 38.49 2.59
69 70 6.964464 TGGCACAGAATATAAAAGGGACTAA 58.036 36.000 0.00 0.00 38.49 2.24
70 71 7.582719 TGGCACAGAATATAAAAGGGACTAAT 58.417 34.615 0.00 0.00 38.49 1.73
71 72 8.719596 TGGCACAGAATATAAAAGGGACTAATA 58.280 33.333 0.00 0.00 38.49 0.98
82 83 5.437191 AAGGGACTAATAAACCAGGACAG 57.563 43.478 0.00 0.00 38.49 3.51
83 84 4.695606 AGGGACTAATAAACCAGGACAGA 58.304 43.478 0.00 0.00 36.02 3.41
85 86 5.131142 AGGGACTAATAAACCAGGACAGATG 59.869 44.000 0.00 0.00 36.02 2.90
87 88 6.099269 GGGACTAATAAACCAGGACAGATGTA 59.901 42.308 0.00 0.00 0.00 2.29
88 89 7.210873 GGACTAATAAACCAGGACAGATGTAG 58.789 42.308 0.00 0.00 0.00 2.74
89 90 7.147707 GGACTAATAAACCAGGACAGATGTAGT 60.148 40.741 0.00 0.00 0.00 2.73
91 92 9.263446 ACTAATAAACCAGGACAGATGTAGTAA 57.737 33.333 0.00 0.00 0.00 2.24
180 181 7.944729 AATAGCAGGATGACAGTTTTATTGT 57.055 32.000 0.00 0.00 39.69 2.71
181 182 7.944729 ATAGCAGGATGACAGTTTTATTGTT 57.055 32.000 0.00 0.00 39.69 2.83
182 183 9.461312 AATAGCAGGATGACAGTTTTATTGTTA 57.539 29.630 0.00 0.00 39.69 2.41
183 184 7.759489 AGCAGGATGACAGTTTTATTGTTAA 57.241 32.000 0.00 0.00 39.69 2.01
186 187 7.965107 GCAGGATGACAGTTTTATTGTTAAGAG 59.035 37.037 0.00 0.00 39.69 2.85
187 188 9.003658 CAGGATGACAGTTTTATTGTTAAGAGT 57.996 33.333 0.00 0.00 39.69 3.24
192 193 8.726988 TGACAGTTTTATTGTTAAGAGTATGGC 58.273 33.333 0.00 0.00 0.00 4.40
194 195 9.243105 ACAGTTTTATTGTTAAGAGTATGGCAT 57.757 29.630 4.88 4.88 0.00 4.40
196 197 9.686683 AGTTTTATTGTTAAGAGTATGGCATCT 57.313 29.630 1.65 0.63 0.00 2.90
234 235 8.837099 ACAGGTCATTTTTATCAATAATGGGA 57.163 30.769 0.00 0.00 31.74 4.37
236 237 9.701098 CAGGTCATTTTTATCAATAATGGGATG 57.299 33.333 0.00 0.00 31.74 3.51
237 238 8.873144 AGGTCATTTTTATCAATAATGGGATGG 58.127 33.333 0.00 0.00 31.74 3.51
238 239 7.603784 GGTCATTTTTATCAATAATGGGATGGC 59.396 37.037 0.00 0.00 31.74 4.40
239 240 8.149647 GTCATTTTTATCAATAATGGGATGGCA 58.850 33.333 0.00 0.00 31.74 4.92
240 241 8.369424 TCATTTTTATCAATAATGGGATGGCAG 58.631 33.333 0.00 0.00 31.74 4.85
242 243 7.673641 TTTTATCAATAATGGGATGGCAGTT 57.326 32.000 0.00 0.00 0.00 3.16
243 244 7.673641 TTTATCAATAATGGGATGGCAGTTT 57.326 32.000 0.00 0.00 0.00 2.66
244 245 7.673641 TTATCAATAATGGGATGGCAGTTTT 57.326 32.000 0.00 0.00 0.00 2.43
245 246 8.774546 TTATCAATAATGGGATGGCAGTTTTA 57.225 30.769 0.00 0.00 0.00 1.52
247 248 7.487822 TCAATAATGGGATGGCAGTTTTAAA 57.512 32.000 0.00 0.00 0.00 1.52
250 251 5.760484 AATGGGATGGCAGTTTTAAACAT 57.240 34.783 10.60 0.00 0.00 2.71
251 252 4.533919 TGGGATGGCAGTTTTAAACATG 57.466 40.909 10.60 6.74 0.00 3.21
252 253 3.260380 TGGGATGGCAGTTTTAAACATGG 59.740 43.478 10.60 0.75 0.00 3.66
253 254 3.513515 GGGATGGCAGTTTTAAACATGGA 59.486 43.478 10.60 0.00 0.00 3.41
254 255 4.020662 GGGATGGCAGTTTTAAACATGGAA 60.021 41.667 10.60 0.00 0.00 3.53
255 256 5.338300 GGGATGGCAGTTTTAAACATGGAAT 60.338 40.000 10.60 0.00 0.00 3.01
256 257 6.172630 GGATGGCAGTTTTAAACATGGAATT 58.827 36.000 10.60 0.00 0.00 2.17
260 261 8.964476 TGGCAGTTTTAAACATGGAATTTTAA 57.036 26.923 10.60 0.00 0.00 1.52
343 344 9.788960 GTCATTTTTATTTACAAGAGGATGTCC 57.211 33.333 0.00 0.00 34.75 4.02
510 512 6.007485 TGGTTATGCCATGGTAGTTTATCA 57.993 37.500 14.67 0.00 43.61 2.15
524 526 4.911390 AGTTTATCATAGGTAGCATGGCC 58.089 43.478 0.00 0.00 0.00 5.36
569 571 7.442969 CCATTCATATTTTTGCCATGCTATGTT 59.557 33.333 0.00 0.00 0.00 2.71
594 596 9.646427 TTAATTTGTTTTTCACATACTATGGCC 57.354 29.630 0.00 0.00 34.43 5.36
627 629 9.762381 TTTATTAACATAACAAGGTGGATTCCT 57.238 29.630 3.95 0.00 39.84 3.36
663 665 8.994429 TTCACACTTATTGTTGTGTCATTTTT 57.006 26.923 1.92 0.00 44.43 1.94
675 677 5.799213 TGTGTCATTTTTCCCAAAAGTTGT 58.201 33.333 0.00 0.00 35.30 3.32
730 732 2.852714 TCATGATCCCAAATGGCCTT 57.147 45.000 3.32 0.00 0.00 4.35
760 762 8.945481 TTTTTATATGTCATGCCATTTTCCTG 57.055 30.769 0.00 0.00 0.00 3.86
787 789 9.124807 GTGTGTTTTTATACCATTAAAGTGAGC 57.875 33.333 0.00 0.00 0.00 4.26
860 863 6.993786 TTTTTGTCCAATTTGAAACCCTTC 57.006 33.333 0.00 0.00 0.00 3.46
862 865 5.529581 TTGTCCAATTTGAAACCCTTCTC 57.470 39.130 0.00 0.00 32.33 2.87
882 886 7.065803 CCTTCTCTCTTTTTGTGTTTGTAGACA 59.934 37.037 0.00 0.00 0.00 3.41
883 887 8.506168 TTCTCTCTTTTTGTGTTTGTAGACAT 57.494 30.769 0.00 0.00 0.00 3.06
892 896 5.931294 TGTGTTTGTAGACATGTAAAGGGA 58.069 37.500 0.00 0.00 0.00 4.20
893 897 5.761234 TGTGTTTGTAGACATGTAAAGGGAC 59.239 40.000 0.00 0.00 0.00 4.46
894 898 5.180680 GTGTTTGTAGACATGTAAAGGGACC 59.819 44.000 0.00 0.00 0.00 4.46
896 900 2.841881 TGTAGACATGTAAAGGGACCCC 59.158 50.000 7.00 1.17 0.00 4.95
925 929 6.850752 AAAAATGTAGACATGTAAAGGGGG 57.149 37.500 0.00 0.00 36.56 5.40
926 930 5.789574 AAATGTAGACATGTAAAGGGGGA 57.210 39.130 0.00 0.00 36.56 4.81
927 931 5.373812 AATGTAGACATGTAAAGGGGGAG 57.626 43.478 0.00 0.00 36.56 4.30
928 932 3.112263 TGTAGACATGTAAAGGGGGAGG 58.888 50.000 0.00 0.00 0.00 4.30
929 933 1.596496 AGACATGTAAAGGGGGAGGG 58.404 55.000 0.00 0.00 0.00 4.30
931 935 0.178813 ACATGTAAAGGGGGAGGGGT 60.179 55.000 0.00 0.00 0.00 4.95
932 936 1.007607 CATGTAAAGGGGGAGGGGTT 58.992 55.000 0.00 0.00 0.00 4.11
933 937 1.361197 CATGTAAAGGGGGAGGGGTTT 59.639 52.381 0.00 0.00 0.00 3.27
935 939 0.613853 GTAAAGGGGGAGGGGTTTGC 60.614 60.000 0.00 0.00 0.00 3.68
937 941 2.386391 AAAGGGGGAGGGGTTTGCTG 62.386 60.000 0.00 0.00 0.00 4.41
942 946 4.344865 GAGGGGTTTGCTGGCCGA 62.345 66.667 0.00 0.00 0.00 5.54
943 947 4.351054 AGGGGTTTGCTGGCCGAG 62.351 66.667 0.00 0.00 0.00 4.63
944 948 4.344865 GGGGTTTGCTGGCCGAGA 62.345 66.667 0.00 0.00 0.00 4.04
945 949 2.044946 GGGTTTGCTGGCCGAGAT 60.045 61.111 0.00 0.00 0.00 2.75
947 951 2.115291 GGTTTGCTGGCCGAGATCC 61.115 63.158 0.00 0.00 0.00 3.36
949 953 2.655073 TTTGCTGGCCGAGATCCGA 61.655 57.895 0.00 0.00 41.76 4.55
950 954 2.578163 TTTGCTGGCCGAGATCCGAG 62.578 60.000 0.00 0.00 41.76 4.63
952 956 3.038280 CTGGCCGAGATCCGAGAG 58.962 66.667 0.00 0.00 41.76 3.20
954 958 4.335584 GGCCGAGATCCGAGAGCG 62.336 72.222 5.32 0.00 41.76 5.03
955 959 3.280634 GCCGAGATCCGAGAGCGA 61.281 66.667 5.32 0.00 41.76 4.93
956 960 2.942879 CCGAGATCCGAGAGCGAG 59.057 66.667 5.32 0.00 41.76 5.03
957 961 1.595655 CCGAGATCCGAGAGCGAGA 60.596 63.158 5.32 0.00 41.76 4.04
959 963 1.567537 GAGATCCGAGAGCGAGACG 59.432 63.158 0.00 0.00 40.82 4.18
961 965 1.155424 AGATCCGAGAGCGAGACGTC 61.155 60.000 7.70 7.70 40.82 4.34
962 966 2.108344 GATCCGAGAGCGAGACGTCC 62.108 65.000 13.01 2.76 40.82 4.79
963 967 3.878519 CCGAGAGCGAGACGTCCC 61.879 72.222 13.01 0.00 40.82 4.46
966 970 2.359602 AGAGCGAGACGTCCCGAA 60.360 61.111 24.32 0.00 0.00 4.30
967 971 1.716826 GAGAGCGAGACGTCCCGAAT 61.717 60.000 24.32 10.55 0.00 3.34
970 974 1.298488 GCGAGACGTCCCGAATCTC 60.298 63.158 24.32 6.15 36.35 2.75
972 976 2.391469 GAGACGTCCCGAATCTCGA 58.609 57.895 13.01 0.00 43.74 4.04
973 977 0.027848 GAGACGTCCCGAATCTCGAC 59.972 60.000 13.01 0.00 43.74 4.20
974 978 1.297451 GACGTCCCGAATCTCGACG 60.297 63.158 3.51 14.53 43.74 5.12
975 979 2.651232 CGTCCCGAATCTCGACGC 60.651 66.667 6.14 0.00 43.74 5.19
976 980 2.488355 GTCCCGAATCTCGACGCA 59.512 61.111 0.00 0.00 43.74 5.24
977 981 1.153901 GTCCCGAATCTCGACGCAA 60.154 57.895 0.00 0.00 43.74 4.85
978 982 1.153901 TCCCGAATCTCGACGCAAC 60.154 57.895 0.00 0.00 43.74 4.17
979 983 2.505498 CCCGAATCTCGACGCAACG 61.505 63.158 0.00 0.00 43.74 4.10
980 984 2.505498 CCGAATCTCGACGCAACGG 61.505 63.158 0.00 0.00 43.74 4.44
982 986 2.048597 AATCTCGACGCAACGGCA 60.049 55.556 0.00 0.00 41.24 5.69
983 987 2.279937 GAATCTCGACGCAACGGCAC 62.280 60.000 0.00 0.00 41.24 5.01
1001 1005 4.431131 CCCCGGCAGGCACTCATT 62.431 66.667 0.00 0.00 34.60 2.57
1042 2473 1.607801 ATGCAGGCACTAGCACGAGA 61.608 55.000 0.00 0.00 42.92 4.04
1459 2969 4.193240 ACAAGGATGTGGGTTAGGTTTT 57.807 40.909 0.00 0.00 38.69 2.43
1486 2996 4.995124 AGCAGATGTTTGATGAAATGCTC 58.005 39.130 0.00 0.00 38.30 4.26
1597 3169 9.844790 TGAACATGAAGCAGATTTTACTAATTG 57.155 29.630 0.00 0.00 0.00 2.32
1644 3216 4.261405 GGATTAGAGATCCACAGACAGTCG 60.261 50.000 0.00 0.00 38.09 4.18
1663 3241 1.473965 CGCACTGGCAATCCTATCACT 60.474 52.381 0.00 0.00 41.24 3.41
1717 3295 7.201947 GGAAGGAATAGATAAAATTGCAAGCCT 60.202 37.037 4.94 0.00 0.00 4.58
2104 3886 6.985059 AGTTTGACAAGTTTGACTAGGTCTAC 59.015 38.462 0.00 9.95 35.18 2.59
2234 4021 6.212388 AGACATGGTCAAATGTAGAGAAGACT 59.788 38.462 0.00 0.00 40.87 3.24
2243 4030 6.783708 AATGTAGAGAAGACTGACTTAGGG 57.216 41.667 0.00 0.00 39.13 3.53
2637 4519 3.679389 CAGCCTGATCACTACCTTTGTT 58.321 45.455 0.00 0.00 0.00 2.83
2658 4591 1.136000 TGATGCGACAACATTGCTTCG 60.136 47.619 0.00 1.44 42.41 3.79
2845 4870 8.244802 GGTCATACTGATAGTAATACAGCGAAT 58.755 37.037 0.00 0.00 33.89 3.34
3019 5046 8.615211 GCACTGATACATGTTTGAGATAATCAA 58.385 33.333 2.30 0.00 46.31 2.57
3158 5186 2.125512 CACCGTGCTGTAGCTCCC 60.126 66.667 5.38 0.00 42.66 4.30
3165 5193 2.885266 CGTGCTGTAGCTCCCTATCTAA 59.115 50.000 5.38 0.00 42.66 2.10
3217 5374 1.691976 CTGCATTGGATTGGGCATGAT 59.308 47.619 0.00 0.00 35.45 2.45
3373 5586 8.919777 TCGATTTATCTGTCTGTATAGAAGGA 57.080 34.615 0.00 0.00 34.01 3.36
3451 5664 6.019961 ACTGTTTTTGTGATATTGTTTGCACG 60.020 34.615 0.00 0.00 34.12 5.34
3454 5667 4.820284 TTGTGATATTGTTTGCACGTCA 57.180 36.364 0.00 0.00 34.12 4.35
3485 5708 2.223157 TGCTTGAAGGTGAAAACGTTCG 60.223 45.455 0.00 0.00 37.33 3.95
3490 5713 0.591170 AGGTGAAAACGTTCGCATGG 59.409 50.000 0.00 0.00 44.59 3.66
3513 5736 6.432783 TGGTGGAAGTCAATTATGTAGGTTTG 59.567 38.462 0.00 0.00 0.00 2.93
3568 5791 4.729868 AGTCATGGGGCCTAATTCAATAC 58.270 43.478 0.84 0.00 0.00 1.89
3619 7280 1.677576 ACATTGTGGCATTATGCTCCG 59.322 47.619 17.13 3.11 44.28 4.63
3636 7297 1.164041 CCGTGAAAACCTTCAGGCGT 61.164 55.000 0.00 0.00 42.27 5.68
3784 7464 6.693315 GCAGGGTTACAATGCTATTTCTTA 57.307 37.500 4.17 0.00 37.00 2.10
3792 7473 6.469782 ACAATGCTATTTCTTAATGGGTGG 57.530 37.500 0.00 0.00 0.00 4.61
3801 7482 7.738437 ATTTCTTAATGGGTGGATCATGTTT 57.262 32.000 0.00 0.00 0.00 2.83
3834 7517 6.455360 TCAATCTTCATGGTGGAATTTAGC 57.545 37.500 0.00 0.00 0.00 3.09
3843 7526 5.146010 TGGTGGAATTTAGCAATTGAACC 57.854 39.130 10.34 2.77 36.14 3.62
3885 7569 4.197750 CAATGGATCTGTTTAGAGCTGCT 58.802 43.478 0.00 0.00 39.29 4.24
3897 7584 7.985476 TGTTTAGAGCTGCTTTGATAAATACC 58.015 34.615 2.53 0.00 0.00 2.73
3909 7596 4.854173 TGATAAATACCCACATGTGTGCT 58.146 39.130 23.79 8.51 44.34 4.40
3942 7630 6.462552 TTCATTTCTTGGATCACACACAAA 57.537 33.333 0.00 0.00 0.00 2.83
3944 7632 6.680810 TCATTTCTTGGATCACACACAAATC 58.319 36.000 0.00 0.00 0.00 2.17
4048 7917 6.342111 TGTGCATAATAATTCAGACCGTGTA 58.658 36.000 0.00 0.00 0.00 2.90
4054 7923 8.604035 CATAATAATTCAGACCGTGTATATGGC 58.396 37.037 0.00 0.00 36.36 4.40
4089 9570 5.065090 ACATACACGTACGTAGCAGATTACA 59.935 40.000 22.34 0.00 0.00 2.41
4234 10006 9.257651 GACAAAAGTAGTGAACAATAGTACACT 57.742 33.333 0.00 0.00 44.17 3.55
4330 10108 9.880064 CAATTTTGATTGCATTTGACATGTTTA 57.120 25.926 0.00 0.00 0.00 2.01
4347 10125 8.393671 ACATGTTTAGGGTATAAAAACGTTGA 57.606 30.769 0.00 0.00 36.19 3.18
4374 10152 5.237815 TGTCACAGATGGCTAGTTGTAAAG 58.762 41.667 0.00 0.00 0.00 1.85
4386 10164 9.431887 TGGCTAGTTGTAAAGTAAGAATACAAG 57.568 33.333 0.00 0.00 39.46 3.16
4399 10177 5.426689 AGAATACAAGATCTCAAGTGGCA 57.573 39.130 0.00 0.00 0.00 4.92
4410 10188 3.575256 TCTCAAGTGGCAAATGAGCAATT 59.425 39.130 20.31 0.00 40.26 2.32
4411 10189 3.916761 TCAAGTGGCAAATGAGCAATTC 58.083 40.909 0.00 0.00 35.83 2.17
4412 10190 3.575256 TCAAGTGGCAAATGAGCAATTCT 59.425 39.130 0.00 0.00 35.83 2.40
4414 10192 2.232941 AGTGGCAAATGAGCAATTCTGG 59.767 45.455 0.00 0.00 35.83 3.86
4415 10193 2.231964 GTGGCAAATGAGCAATTCTGGA 59.768 45.455 0.00 0.00 35.83 3.86
4504 10282 9.856488 TCGAAATATATACCATCTCTTGTAAGC 57.144 33.333 0.00 0.00 0.00 3.09
4505 10283 9.639601 CGAAATATATACCATCTCTTGTAAGCA 57.360 33.333 0.00 0.00 0.00 3.91
4508 10286 9.935241 AATATATACCATCTCTTGTAAGCACTG 57.065 33.333 0.00 0.00 0.00 3.66
4509 10287 5.683876 ATACCATCTCTTGTAAGCACTGT 57.316 39.130 0.00 0.00 0.00 3.55
4510 10288 4.357918 ACCATCTCTTGTAAGCACTGTT 57.642 40.909 0.00 0.00 0.00 3.16
4511 10289 4.319177 ACCATCTCTTGTAAGCACTGTTC 58.681 43.478 0.00 0.00 0.00 3.18
4512 10290 4.202357 ACCATCTCTTGTAAGCACTGTTCA 60.202 41.667 0.00 0.00 0.00 3.18
4513 10291 4.756642 CCATCTCTTGTAAGCACTGTTCAA 59.243 41.667 0.00 0.00 0.00 2.69
4514 10292 5.239306 CCATCTCTTGTAAGCACTGTTCAAA 59.761 40.000 0.00 0.00 0.00 2.69
4515 10293 6.238731 CCATCTCTTGTAAGCACTGTTCAAAA 60.239 38.462 0.00 0.00 0.00 2.44
4516 10294 6.751514 TCTCTTGTAAGCACTGTTCAAAAA 57.248 33.333 0.00 0.00 0.00 1.94
4564 10342 9.021807 TCATTAGATTTATCGTTACTCCTAGGG 57.978 37.037 9.46 2.03 0.00 3.53
4565 10343 8.804204 CATTAGATTTATCGTTACTCCTAGGGT 58.196 37.037 9.46 8.50 0.00 4.34
4566 10344 6.651975 AGATTTATCGTTACTCCTAGGGTG 57.348 41.667 9.46 5.02 0.00 4.61
4567 10345 6.371278 AGATTTATCGTTACTCCTAGGGTGA 58.629 40.000 9.46 0.00 0.00 4.02
4568 10346 5.841957 TTTATCGTTACTCCTAGGGTGAC 57.158 43.478 9.46 11.41 0.00 3.67
4588 10366 8.045176 GGTGACCAATAAGATTATGCCTTATC 57.955 38.462 0.00 0.00 36.21 1.75
4589 10367 7.885399 GGTGACCAATAAGATTATGCCTTATCT 59.115 37.037 0.00 0.00 36.21 1.98
4590 10368 9.289782 GTGACCAATAAGATTATGCCTTATCTT 57.710 33.333 8.07 8.07 42.24 2.40
4591 10369 9.288576 TGACCAATAAGATTATGCCTTATCTTG 57.711 33.333 11.90 0.75 40.38 3.02
4592 10370 9.507329 GACCAATAAGATTATGCCTTATCTTGA 57.493 33.333 11.90 0.33 40.38 3.02
4593 10371 9.289782 ACCAATAAGATTATGCCTTATCTTGAC 57.710 33.333 11.90 0.00 40.38 3.18
4594 10372 9.512588 CCAATAAGATTATGCCTTATCTTGACT 57.487 33.333 11.90 0.00 40.38 3.41
4598 10376 8.814038 AAGATTATGCCTTATCTTGACTGTTT 57.186 30.769 2.93 0.00 39.11 2.83
4599 10377 9.905713 AAGATTATGCCTTATCTTGACTGTTTA 57.094 29.630 2.93 0.00 39.11 2.01
4602 10380 6.851222 ATGCCTTATCTTGACTGTTTATCG 57.149 37.500 0.00 0.00 0.00 2.92
4603 10381 5.730550 TGCCTTATCTTGACTGTTTATCGT 58.269 37.500 0.00 0.00 0.00 3.73
4604 10382 6.170506 TGCCTTATCTTGACTGTTTATCGTT 58.829 36.000 0.00 0.00 0.00 3.85
4605 10383 6.653320 TGCCTTATCTTGACTGTTTATCGTTT 59.347 34.615 0.00 0.00 0.00 3.60
4606 10384 6.961554 GCCTTATCTTGACTGTTTATCGTTTG 59.038 38.462 0.00 0.00 0.00 2.93
4607 10385 7.464358 CCTTATCTTGACTGTTTATCGTTTGG 58.536 38.462 0.00 0.00 0.00 3.28
4608 10386 7.119262 CCTTATCTTGACTGTTTATCGTTTGGT 59.881 37.037 0.00 0.00 0.00 3.67
4609 10387 5.917541 TCTTGACTGTTTATCGTTTGGTC 57.082 39.130 0.00 0.00 0.00 4.02
4610 10388 5.361427 TCTTGACTGTTTATCGTTTGGTCA 58.639 37.500 0.00 0.00 0.00 4.02
4611 10389 5.465390 TCTTGACTGTTTATCGTTTGGTCAG 59.535 40.000 0.00 0.00 34.48 3.51
4612 10390 4.951254 TGACTGTTTATCGTTTGGTCAGA 58.049 39.130 0.00 0.00 0.00 3.27
4613 10391 5.547465 TGACTGTTTATCGTTTGGTCAGAT 58.453 37.500 0.00 0.00 0.00 2.90
4614 10392 5.995282 TGACTGTTTATCGTTTGGTCAGATT 59.005 36.000 0.00 0.00 0.00 2.40
4615 10393 6.485313 TGACTGTTTATCGTTTGGTCAGATTT 59.515 34.615 0.00 0.00 0.00 2.17
4616 10394 7.658167 TGACTGTTTATCGTTTGGTCAGATTTA 59.342 33.333 0.00 0.00 0.00 1.40
4617 10395 8.561738 ACTGTTTATCGTTTGGTCAGATTTAT 57.438 30.769 0.00 0.00 0.00 1.40
4618 10396 9.010029 ACTGTTTATCGTTTGGTCAGATTTATT 57.990 29.630 0.00 0.00 0.00 1.40
4619 10397 9.277565 CTGTTTATCGTTTGGTCAGATTTATTG 57.722 33.333 0.00 0.00 0.00 1.90
4620 10398 7.753132 TGTTTATCGTTTGGTCAGATTTATTGC 59.247 33.333 0.00 0.00 0.00 3.56
4621 10399 7.624360 TTATCGTTTGGTCAGATTTATTGCT 57.376 32.000 0.00 0.00 0.00 3.91
4622 10400 5.545658 TCGTTTGGTCAGATTTATTGCTC 57.454 39.130 0.00 0.00 0.00 4.26
4623 10401 5.245531 TCGTTTGGTCAGATTTATTGCTCT 58.754 37.500 0.00 0.00 0.00 4.09
4624 10402 5.351465 TCGTTTGGTCAGATTTATTGCTCTC 59.649 40.000 0.00 0.00 0.00 3.20
4625 10403 5.122239 CGTTTGGTCAGATTTATTGCTCTCA 59.878 40.000 0.00 0.00 0.00 3.27
4626 10404 6.317857 GTTTGGTCAGATTTATTGCTCTCAC 58.682 40.000 0.00 0.00 0.00 3.51
4627 10405 5.164620 TGGTCAGATTTATTGCTCTCACA 57.835 39.130 0.00 0.00 0.00 3.58
4628 10406 5.559770 TGGTCAGATTTATTGCTCTCACAA 58.440 37.500 0.00 0.00 0.00 3.33
4629 10407 5.645067 TGGTCAGATTTATTGCTCTCACAAG 59.355 40.000 0.00 0.00 31.96 3.16
4630 10408 5.448360 GGTCAGATTTATTGCTCTCACAAGC 60.448 44.000 0.00 0.00 42.82 4.01
4631 10409 4.637534 TCAGATTTATTGCTCTCACAAGCC 59.362 41.667 0.00 0.00 41.77 4.35
4632 10410 4.397103 CAGATTTATTGCTCTCACAAGCCA 59.603 41.667 0.00 0.00 41.77 4.75
4633 10411 5.067413 CAGATTTATTGCTCTCACAAGCCAT 59.933 40.000 0.00 0.00 41.77 4.40
4634 10412 5.655532 AGATTTATTGCTCTCACAAGCCATT 59.344 36.000 0.00 0.00 41.77 3.16
4635 10413 5.726980 TTTATTGCTCTCACAAGCCATTT 57.273 34.783 0.00 0.00 41.77 2.32
4636 10414 6.832520 TTTATTGCTCTCACAAGCCATTTA 57.167 33.333 0.00 0.00 41.77 1.40
4637 10415 7.408756 TTTATTGCTCTCACAAGCCATTTAT 57.591 32.000 0.00 0.00 41.77 1.40
4638 10416 4.970662 TTGCTCTCACAAGCCATTTATC 57.029 40.909 0.00 0.00 41.77 1.75
4639 10417 2.938451 TGCTCTCACAAGCCATTTATCG 59.062 45.455 0.00 0.00 41.77 2.92
4640 10418 3.198068 GCTCTCACAAGCCATTTATCGA 58.802 45.455 0.00 0.00 36.22 3.59
4641 10419 3.247173 GCTCTCACAAGCCATTTATCGAG 59.753 47.826 0.00 0.00 36.22 4.04
4642 10420 4.686972 CTCTCACAAGCCATTTATCGAGA 58.313 43.478 0.00 0.00 0.00 4.04
4643 10421 5.084818 TCTCACAAGCCATTTATCGAGAA 57.915 39.130 0.00 0.00 0.00 2.87
4644 10422 5.674525 TCTCACAAGCCATTTATCGAGAAT 58.325 37.500 0.00 0.00 0.00 2.40
4645 10423 5.755375 TCTCACAAGCCATTTATCGAGAATC 59.245 40.000 0.00 0.00 0.00 2.52
4646 10424 5.674525 TCACAAGCCATTTATCGAGAATCT 58.325 37.500 0.00 0.00 0.00 2.40
4647 10425 6.816136 TCACAAGCCATTTATCGAGAATCTA 58.184 36.000 0.00 0.00 0.00 1.98
4648 10426 6.701841 TCACAAGCCATTTATCGAGAATCTAC 59.298 38.462 0.00 0.00 0.00 2.59
4649 10427 6.703607 CACAAGCCATTTATCGAGAATCTACT 59.296 38.462 0.00 0.00 0.00 2.57
4650 10428 6.703607 ACAAGCCATTTATCGAGAATCTACTG 59.296 38.462 0.00 0.00 0.00 2.74
4651 10429 6.656632 AGCCATTTATCGAGAATCTACTGA 57.343 37.500 0.00 0.00 0.00 3.41
4652 10430 7.238486 AGCCATTTATCGAGAATCTACTGAT 57.762 36.000 0.00 0.00 33.70 2.90
4653 10431 8.354711 AGCCATTTATCGAGAATCTACTGATA 57.645 34.615 0.00 0.00 31.70 2.15
4654 10432 8.807118 AGCCATTTATCGAGAATCTACTGATAA 58.193 33.333 0.00 7.54 31.70 1.75
4655 10433 9.424319 GCCATTTATCGAGAATCTACTGATAAA 57.576 33.333 18.54 18.54 42.40 1.40
4661 10439 6.604012 TCGAGAATCTACTGATAAATCGAGC 58.396 40.000 0.00 0.00 36.76 5.03
4662 10440 5.797934 CGAGAATCTACTGATAAATCGAGCC 59.202 44.000 0.00 0.00 35.71 4.70
4663 10441 6.348950 CGAGAATCTACTGATAAATCGAGCCT 60.349 42.308 0.00 0.00 35.71 4.58
4664 10442 7.148390 CGAGAATCTACTGATAAATCGAGCCTA 60.148 40.741 0.00 0.00 35.71 3.93
4665 10443 8.588290 AGAATCTACTGATAAATCGAGCCTAT 57.412 34.615 0.00 0.00 31.70 2.57
4666 10444 9.030452 AGAATCTACTGATAAATCGAGCCTATT 57.970 33.333 0.00 0.00 31.70 1.73
4667 10445 9.646427 GAATCTACTGATAAATCGAGCCTATTT 57.354 33.333 0.00 0.00 31.70 1.40
4668 10446 9.646427 AATCTACTGATAAATCGAGCCTATTTC 57.354 33.333 0.00 0.00 31.70 2.17
4669 10447 8.410673 TCTACTGATAAATCGAGCCTATTTCT 57.589 34.615 0.00 0.00 0.00 2.52
4670 10448 9.516546 TCTACTGATAAATCGAGCCTATTTCTA 57.483 33.333 0.00 0.00 0.00 2.10
4671 10449 9.781834 CTACTGATAAATCGAGCCTATTTCTAG 57.218 37.037 0.00 0.00 0.00 2.43
4672 10450 7.093992 ACTGATAAATCGAGCCTATTTCTAGC 58.906 38.462 0.00 0.00 0.00 3.42
4673 10451 6.993079 TGATAAATCGAGCCTATTTCTAGCA 58.007 36.000 0.00 0.00 0.00 3.49
4674 10452 6.868864 TGATAAATCGAGCCTATTTCTAGCAC 59.131 38.462 0.00 0.00 0.00 4.40
4675 10453 4.946478 AATCGAGCCTATTTCTAGCACT 57.054 40.909 0.00 0.00 0.00 4.40
4676 10454 6.406692 AAATCGAGCCTATTTCTAGCACTA 57.593 37.500 0.00 0.00 0.00 2.74
4677 10455 6.597832 AATCGAGCCTATTTCTAGCACTAT 57.402 37.500 0.00 0.00 0.00 2.12
4678 10456 6.597832 ATCGAGCCTATTTCTAGCACTATT 57.402 37.500 0.00 0.00 0.00 1.73
4679 10457 6.406692 TCGAGCCTATTTCTAGCACTATTT 57.593 37.500 0.00 0.00 0.00 1.40
4680 10458 6.817184 TCGAGCCTATTTCTAGCACTATTTT 58.183 36.000 0.00 0.00 0.00 1.82
4681 10459 7.272978 TCGAGCCTATTTCTAGCACTATTTTT 58.727 34.615 0.00 0.00 0.00 1.94
4713 10491 8.669946 AAACTATGTTTATTTGTGTTTTGGGG 57.330 30.769 0.00 0.00 0.00 4.96
4714 10492 7.604657 ACTATGTTTATTTGTGTTTTGGGGA 57.395 32.000 0.00 0.00 0.00 4.81
4715 10493 7.438564 ACTATGTTTATTTGTGTTTTGGGGAC 58.561 34.615 0.00 0.00 0.00 4.46
4736 10514 8.685838 GGGACCTTATTAAGCAATATGTACAA 57.314 34.615 0.00 0.00 0.00 2.41
4737 10515 9.297037 GGGACCTTATTAAGCAATATGTACAAT 57.703 33.333 0.00 0.00 0.00 2.71
4750 10528 9.801873 GCAATATGTACAATTGTCCTATTTTGT 57.198 29.630 15.85 0.00 36.82 2.83
4755 10533 9.691362 ATGTACAATTGTCCTATTTTGTTTGTC 57.309 29.630 15.85 0.00 34.39 3.18
4756 10534 8.687242 TGTACAATTGTCCTATTTTGTTTGTCA 58.313 29.630 15.85 0.00 34.39 3.58
4757 10535 9.691362 GTACAATTGTCCTATTTTGTTTGTCAT 57.309 29.630 15.85 0.00 34.39 3.06
4773 10551 9.904198 TTGTTTGTCATTATATCAGGATTCAGA 57.096 29.630 0.00 0.00 0.00 3.27
4774 10552 9.551734 TGTTTGTCATTATATCAGGATTCAGAG 57.448 33.333 0.00 0.00 0.00 3.35
4775 10553 8.997323 GTTTGTCATTATATCAGGATTCAGAGG 58.003 37.037 0.00 0.00 0.00 3.69
4776 10554 6.705302 TGTCATTATATCAGGATTCAGAGGC 58.295 40.000 0.00 0.00 0.00 4.70
4777 10555 6.499699 TGTCATTATATCAGGATTCAGAGGCT 59.500 38.462 0.00 0.00 0.00 4.58
4778 10556 7.675619 TGTCATTATATCAGGATTCAGAGGCTA 59.324 37.037 0.00 0.00 0.00 3.93
4779 10557 7.978975 GTCATTATATCAGGATTCAGAGGCTAC 59.021 40.741 0.00 0.00 0.00 3.58
4780 10558 7.675619 TCATTATATCAGGATTCAGAGGCTACA 59.324 37.037 0.00 0.00 0.00 2.74
4781 10559 7.855784 TTATATCAGGATTCAGAGGCTACAA 57.144 36.000 0.00 0.00 0.00 2.41
4782 10560 6.753913 ATATCAGGATTCAGAGGCTACAAA 57.246 37.500 0.00 0.00 0.00 2.83
4783 10561 5.643421 ATCAGGATTCAGAGGCTACAAAT 57.357 39.130 0.00 0.00 0.00 2.32
4784 10562 4.774124 TCAGGATTCAGAGGCTACAAATG 58.226 43.478 0.00 0.00 0.00 2.32
4785 10563 4.471025 TCAGGATTCAGAGGCTACAAATGA 59.529 41.667 0.00 0.00 0.00 2.57
4786 10564 5.045651 TCAGGATTCAGAGGCTACAAATGAA 60.046 40.000 0.00 0.00 34.64 2.57
4787 10565 5.296283 CAGGATTCAGAGGCTACAAATGAAG 59.704 44.000 0.00 0.00 33.73 3.02
4788 10566 4.578105 GGATTCAGAGGCTACAAATGAAGG 59.422 45.833 0.00 0.00 33.73 3.46
4789 10567 4.640771 TTCAGAGGCTACAAATGAAGGT 57.359 40.909 0.00 0.00 0.00 3.50
4790 10568 5.755409 TTCAGAGGCTACAAATGAAGGTA 57.245 39.130 0.00 0.00 0.00 3.08
4791 10569 5.755409 TCAGAGGCTACAAATGAAGGTAA 57.245 39.130 0.00 0.00 0.00 2.85
4792 10570 6.313519 TCAGAGGCTACAAATGAAGGTAAT 57.686 37.500 0.00 0.00 0.00 1.89
4793 10571 7.432148 TCAGAGGCTACAAATGAAGGTAATA 57.568 36.000 0.00 0.00 0.00 0.98
4794 10572 7.272978 TCAGAGGCTACAAATGAAGGTAATAC 58.727 38.462 0.00 0.00 0.00 1.89
4795 10573 7.125811 TCAGAGGCTACAAATGAAGGTAATACT 59.874 37.037 0.00 0.00 0.00 2.12
4796 10574 7.770897 CAGAGGCTACAAATGAAGGTAATACTT 59.229 37.037 0.00 0.00 0.00 2.24
4797 10575 7.988028 AGAGGCTACAAATGAAGGTAATACTTC 59.012 37.037 0.00 0.00 45.49 3.01
4798 10576 7.862675 AGGCTACAAATGAAGGTAATACTTCT 58.137 34.615 7.38 0.00 45.49 2.85
4799 10577 7.770897 AGGCTACAAATGAAGGTAATACTTCTG 59.229 37.037 7.38 1.08 45.49 3.02
4800 10578 7.553044 GGCTACAAATGAAGGTAATACTTCTGT 59.447 37.037 7.38 6.17 45.49 3.41
4801 10579 8.604890 GCTACAAATGAAGGTAATACTTCTGTC 58.395 37.037 7.38 0.00 45.49 3.51
4802 10580 7.923414 ACAAATGAAGGTAATACTTCTGTCC 57.077 36.000 7.38 0.00 45.49 4.02
4803 10581 7.458397 ACAAATGAAGGTAATACTTCTGTCCA 58.542 34.615 7.38 0.00 45.49 4.02
4804 10582 7.942341 ACAAATGAAGGTAATACTTCTGTCCAA 59.058 33.333 7.38 0.00 45.49 3.53
4805 10583 8.960591 CAAATGAAGGTAATACTTCTGTCCAAT 58.039 33.333 7.38 0.00 45.49 3.16
4815 10593 8.924511 AATACTTCTGTCCAATATATGTTGGG 57.075 34.615 25.78 13.51 46.89 4.12
4816 10594 6.575244 ACTTCTGTCCAATATATGTTGGGA 57.425 37.500 25.78 15.28 46.89 4.37
4817 10595 6.969043 ACTTCTGTCCAATATATGTTGGGAA 58.031 36.000 25.78 20.07 46.89 3.97
4818 10596 6.828785 ACTTCTGTCCAATATATGTTGGGAAC 59.171 38.462 25.78 19.14 46.89 3.62
4834 10612 3.483808 GGAACCTGGGATTTGCAAAAA 57.516 42.857 17.19 0.00 0.00 1.94
4864 10642 7.476378 CGATTAGTAGTCGGTCGATAAAATC 57.524 40.000 7.15 2.68 35.55 2.17
4865 10643 7.073883 CGATTAGTAGTCGGTCGATAAAATCA 58.926 38.462 7.15 0.00 35.55 2.57
4866 10644 7.588854 CGATTAGTAGTCGGTCGATAAAATCAA 59.411 37.037 7.15 0.00 35.55 2.57
4867 10645 9.408069 GATTAGTAGTCGGTCGATAAAATCAAT 57.592 33.333 0.00 0.00 0.00 2.57
4868 10646 9.760077 ATTAGTAGTCGGTCGATAAAATCAATT 57.240 29.630 0.00 0.00 0.00 2.32
4871 10649 9.760077 AGTAGTCGGTCGATAAAATCAATTAAT 57.240 29.630 0.00 0.00 0.00 1.40
4873 10651 7.784176 AGTCGGTCGATAAAATCAATTAATCG 58.216 34.615 11.35 11.35 37.24 3.34
4874 10652 7.650504 AGTCGGTCGATAAAATCAATTAATCGA 59.349 33.333 14.29 14.29 39.93 3.59
4897 10675 9.967346 TCGACAGATTTTCGATTAATCTCTAAT 57.033 29.630 16.25 9.06 40.51 1.73
4909 10687 9.796120 CGATTAATCTCTAATTCTAGGATGACC 57.204 37.037 13.45 0.00 0.00 4.02
4910 10688 9.796120 GATTAATCTCTAATTCTAGGATGACCG 57.204 37.037 8.27 0.00 41.83 4.79
4911 10689 8.935614 TTAATCTCTAATTCTAGGATGACCGA 57.064 34.615 0.00 0.00 41.83 4.69
4912 10690 7.461182 AATCTCTAATTCTAGGATGACCGAG 57.539 40.000 0.00 0.00 41.83 4.63
4913 10691 6.189036 TCTCTAATTCTAGGATGACCGAGA 57.811 41.667 0.00 0.00 44.06 4.04
4914 10692 5.998981 TCTCTAATTCTAGGATGACCGAGAC 59.001 44.000 0.00 0.00 45.08 3.36
4915 10693 3.992260 AATTCTAGGATGACCGAGACG 57.008 47.619 0.00 0.00 45.08 4.18
4916 10694 1.022735 TTCTAGGATGACCGAGACGC 58.977 55.000 0.00 0.00 45.08 5.19
4917 10695 0.180642 TCTAGGATGACCGAGACGCT 59.819 55.000 0.00 0.00 41.66 5.07
4918 10696 1.415289 TCTAGGATGACCGAGACGCTA 59.585 52.381 0.00 0.00 41.66 4.26
4919 10697 2.158856 TCTAGGATGACCGAGACGCTAA 60.159 50.000 0.00 0.00 41.66 3.09
4920 10698 0.739561 AGGATGACCGAGACGCTAAC 59.260 55.000 0.00 0.00 41.83 2.34
4921 10699 0.454600 GGATGACCGAGACGCTAACA 59.545 55.000 0.00 0.00 0.00 2.41
4922 10700 1.135199 GGATGACCGAGACGCTAACAA 60.135 52.381 0.00 0.00 0.00 2.83
4923 10701 2.481449 GGATGACCGAGACGCTAACAAT 60.481 50.000 0.00 0.00 0.00 2.71
4924 10702 3.243301 GGATGACCGAGACGCTAACAATA 60.243 47.826 0.00 0.00 0.00 1.90
4925 10703 3.853831 TGACCGAGACGCTAACAATAA 57.146 42.857 0.00 0.00 0.00 1.40
4926 10704 3.766151 TGACCGAGACGCTAACAATAAG 58.234 45.455 0.00 0.00 0.00 1.73
4927 10705 2.534757 GACCGAGACGCTAACAATAAGC 59.465 50.000 0.00 0.00 36.60 3.09
4940 10718 7.851508 GCTAACAATAAGCGATATTCTCAACA 58.148 34.615 0.00 0.00 31.69 3.33
4941 10719 8.499162 GCTAACAATAAGCGATATTCTCAACAT 58.501 33.333 0.00 0.00 31.69 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 9.515226 TTTATATTCTGTGCCAAAGTTAGAACT 57.485 29.630 0.00 0.00 42.04 3.01
37 38 8.956426 CCTTTTATATTCTGTGCCAAAGTTAGA 58.044 33.333 0.00 0.00 0.00 2.10
38 39 8.190784 CCCTTTTATATTCTGTGCCAAAGTTAG 58.809 37.037 0.00 0.00 0.00 2.34
39 40 7.891183 TCCCTTTTATATTCTGTGCCAAAGTTA 59.109 33.333 0.00 0.00 0.00 2.24
41 42 6.152831 GTCCCTTTTATATTCTGTGCCAAAGT 59.847 38.462 0.00 0.00 0.00 2.66
43 44 6.252995 AGTCCCTTTTATATTCTGTGCCAAA 58.747 36.000 0.00 0.00 0.00 3.28
45 46 5.450818 AGTCCCTTTTATATTCTGTGCCA 57.549 39.130 0.00 0.00 0.00 4.92
55 56 9.060137 TGTCCTGGTTTATTAGTCCCTTTTATA 57.940 33.333 0.00 0.00 0.00 0.98
56 57 7.935405 TGTCCTGGTTTATTAGTCCCTTTTAT 58.065 34.615 0.00 0.00 0.00 1.40
57 58 7.238096 TCTGTCCTGGTTTATTAGTCCCTTTTA 59.762 37.037 0.00 0.00 0.00 1.52
59 60 5.550403 TCTGTCCTGGTTTATTAGTCCCTTT 59.450 40.000 0.00 0.00 0.00 3.11
61 62 4.695606 TCTGTCCTGGTTTATTAGTCCCT 58.304 43.478 0.00 0.00 0.00 4.20
62 63 5.104485 ACATCTGTCCTGGTTTATTAGTCCC 60.104 44.000 0.00 0.00 0.00 4.46
63 64 5.990668 ACATCTGTCCTGGTTTATTAGTCC 58.009 41.667 0.00 0.00 0.00 3.85
65 66 7.735326 ACTACATCTGTCCTGGTTTATTAGT 57.265 36.000 0.00 0.00 0.00 2.24
154 155 9.461312 ACAATAAAACTGTCATCCTGCTATTTA 57.539 29.630 0.00 0.00 0.00 1.40
155 156 8.353423 ACAATAAAACTGTCATCCTGCTATTT 57.647 30.769 0.00 0.00 0.00 1.40
156 157 7.944729 ACAATAAAACTGTCATCCTGCTATT 57.055 32.000 0.00 0.00 0.00 1.73
157 158 7.944729 AACAATAAAACTGTCATCCTGCTAT 57.055 32.000 0.00 0.00 0.00 2.97
158 159 8.856153 TTAACAATAAAACTGTCATCCTGCTA 57.144 30.769 0.00 0.00 0.00 3.49
159 160 7.665559 TCTTAACAATAAAACTGTCATCCTGCT 59.334 33.333 0.00 0.00 0.00 4.24
160 161 7.816640 TCTTAACAATAAAACTGTCATCCTGC 58.183 34.615 0.00 0.00 0.00 4.85
161 162 9.003658 ACTCTTAACAATAAAACTGTCATCCTG 57.996 33.333 0.00 0.00 0.00 3.86
166 167 8.726988 GCCATACTCTTAACAATAAAACTGTCA 58.273 33.333 0.00 0.00 0.00 3.58
167 168 8.726988 TGCCATACTCTTAACAATAAAACTGTC 58.273 33.333 0.00 0.00 0.00 3.51
168 169 8.630054 TGCCATACTCTTAACAATAAAACTGT 57.370 30.769 0.00 0.00 0.00 3.55
169 170 9.722056 GATGCCATACTCTTAACAATAAAACTG 57.278 33.333 0.00 0.00 0.00 3.16
170 171 9.686683 AGATGCCATACTCTTAACAATAAAACT 57.313 29.630 0.00 0.00 0.00 2.66
208 209 9.265862 TCCCATTATTGATAAAAATGACCTGTT 57.734 29.630 0.00 0.00 33.38 3.16
209 210 8.837099 TCCCATTATTGATAAAAATGACCTGT 57.163 30.769 0.00 0.00 33.38 4.00
210 211 9.701098 CATCCCATTATTGATAAAAATGACCTG 57.299 33.333 0.00 0.00 33.38 4.00
211 212 8.873144 CCATCCCATTATTGATAAAAATGACCT 58.127 33.333 0.00 0.00 33.38 3.85
212 213 7.603784 GCCATCCCATTATTGATAAAAATGACC 59.396 37.037 0.00 0.00 33.38 4.02
213 214 8.149647 TGCCATCCCATTATTGATAAAAATGAC 58.850 33.333 0.00 0.00 33.38 3.06
214 215 8.260099 TGCCATCCCATTATTGATAAAAATGA 57.740 30.769 0.00 0.00 33.38 2.57
215 216 8.152246 ACTGCCATCCCATTATTGATAAAAATG 58.848 33.333 0.00 0.00 0.00 2.32
216 217 8.266363 ACTGCCATCCCATTATTGATAAAAAT 57.734 30.769 0.00 0.00 0.00 1.82
217 218 7.673641 ACTGCCATCCCATTATTGATAAAAA 57.326 32.000 0.00 0.00 0.00 1.94
218 219 7.673641 AACTGCCATCCCATTATTGATAAAA 57.326 32.000 0.00 0.00 0.00 1.52
219 220 7.673641 AAACTGCCATCCCATTATTGATAAA 57.326 32.000 0.00 0.00 0.00 1.40
220 221 7.673641 AAAACTGCCATCCCATTATTGATAA 57.326 32.000 0.00 0.00 0.00 1.75
221 222 8.774546 TTAAAACTGCCATCCCATTATTGATA 57.225 30.769 0.00 0.00 0.00 2.15
223 224 7.038729 TGTTTAAAACTGCCATCCCATTATTGA 60.039 33.333 0.00 0.00 0.00 2.57
224 225 7.102346 TGTTTAAAACTGCCATCCCATTATTG 58.898 34.615 0.00 0.00 0.00 1.90
227 228 6.351711 CCATGTTTAAAACTGCCATCCCATTA 60.352 38.462 0.00 0.00 0.00 1.90
229 230 4.080975 CCATGTTTAAAACTGCCATCCCAT 60.081 41.667 0.00 0.00 0.00 4.00
230 231 3.260380 CCATGTTTAAAACTGCCATCCCA 59.740 43.478 0.00 0.00 0.00 4.37
231 232 3.513515 TCCATGTTTAAAACTGCCATCCC 59.486 43.478 0.00 0.00 0.00 3.85
232 233 4.799564 TCCATGTTTAAAACTGCCATCC 57.200 40.909 0.00 0.00 0.00 3.51
233 234 7.671495 AAATTCCATGTTTAAAACTGCCATC 57.329 32.000 0.00 0.00 0.00 3.51
234 235 9.566432 TTAAAATTCCATGTTTAAAACTGCCAT 57.434 25.926 0.00 0.00 0.00 4.40
318 319 8.673711 CGGACATCCTCTTGTAAATAAAAATGA 58.326 33.333 0.00 0.00 0.00 2.57
465 466 9.838339 AACCAATACAAATGTCATGGTTTTAAA 57.162 25.926 21.15 0.00 46.18 1.52
510 512 3.508845 AAATTCGGCCATGCTACCTAT 57.491 42.857 2.24 0.00 0.00 2.57
524 526 6.964370 TGAATGGTGCGTAGAAAATAAATTCG 59.036 34.615 0.00 0.00 34.46 3.34
569 571 8.807118 TGGCCATAGTATGTGAAAAACAAATTA 58.193 29.630 0.00 0.00 43.61 1.40
571 573 7.238486 TGGCCATAGTATGTGAAAAACAAAT 57.762 32.000 0.00 0.00 43.61 2.32
663 665 5.449862 CGAGAAAACATGACAACTTTTGGGA 60.450 40.000 0.00 0.00 34.12 4.37
737 739 6.610830 ACCAGGAAAATGGCATGACATATAAA 59.389 34.615 16.16 0.00 44.80 1.40
750 752 6.871492 GGTATAAAAACACACCAGGAAAATGG 59.129 38.462 0.00 0.00 46.47 3.16
760 762 9.620660 CTCACTTTAATGGTATAAAAACACACC 57.379 33.333 0.00 0.00 0.00 4.16
787 789 3.380320 CCTTAAGCCCCGTTATTTTGGAG 59.620 47.826 0.00 0.00 0.00 3.86
839 842 5.660864 AGAGAAGGGTTTCAAATTGGACAAA 59.339 36.000 0.00 0.00 35.70 2.83
841 844 4.803452 AGAGAAGGGTTTCAAATTGGACA 58.197 39.130 0.00 0.00 35.70 4.02
855 858 5.582689 ACAAACACAAAAAGAGAGAAGGG 57.417 39.130 0.00 0.00 0.00 3.95
857 860 7.974675 TGTCTACAAACACAAAAAGAGAGAAG 58.025 34.615 0.00 0.00 0.00 2.85
860 863 7.697691 ACATGTCTACAAACACAAAAAGAGAG 58.302 34.615 0.00 0.00 30.55 3.20
862 865 9.781834 TTTACATGTCTACAAACACAAAAAGAG 57.218 29.630 0.00 0.00 30.55 2.85
903 907 6.147437 TCCCCCTTTACATGTCTACATTTT 57.853 37.500 0.00 0.00 33.61 1.82
906 910 3.716872 CCTCCCCCTTTACATGTCTACAT 59.283 47.826 0.00 0.00 36.96 2.29
907 911 3.112263 CCTCCCCCTTTACATGTCTACA 58.888 50.000 0.00 0.00 0.00 2.74
908 912 2.438392 CCCTCCCCCTTTACATGTCTAC 59.562 54.545 0.00 0.00 0.00 2.59
909 913 2.631268 CCCCTCCCCCTTTACATGTCTA 60.631 54.545 0.00 0.00 0.00 2.59
910 914 1.596496 CCCTCCCCCTTTACATGTCT 58.404 55.000 0.00 0.00 0.00 3.41
911 915 0.551396 CCCCTCCCCCTTTACATGTC 59.449 60.000 0.00 0.00 0.00 3.06
913 917 1.007607 AACCCCTCCCCCTTTACATG 58.992 55.000 0.00 0.00 0.00 3.21
914 918 1.361197 CAAACCCCTCCCCCTTTACAT 59.639 52.381 0.00 0.00 0.00 2.29
915 919 0.781278 CAAACCCCTCCCCCTTTACA 59.219 55.000 0.00 0.00 0.00 2.41
916 920 0.613853 GCAAACCCCTCCCCCTTTAC 60.614 60.000 0.00 0.00 0.00 2.01
917 921 0.778479 AGCAAACCCCTCCCCCTTTA 60.778 55.000 0.00 0.00 0.00 1.85
920 924 3.268032 CAGCAAACCCCTCCCCCT 61.268 66.667 0.00 0.00 0.00 4.79
921 925 4.382541 CCAGCAAACCCCTCCCCC 62.383 72.222 0.00 0.00 0.00 5.40
925 929 4.344865 TCGGCCAGCAAACCCCTC 62.345 66.667 2.24 0.00 0.00 4.30
926 930 4.351054 CTCGGCCAGCAAACCCCT 62.351 66.667 2.24 0.00 0.00 4.79
927 931 3.645268 ATCTCGGCCAGCAAACCCC 62.645 63.158 2.24 0.00 0.00 4.95
928 932 2.044946 ATCTCGGCCAGCAAACCC 60.045 61.111 2.24 0.00 0.00 4.11
929 933 2.115291 GGATCTCGGCCAGCAAACC 61.115 63.158 2.24 0.00 0.00 3.27
931 935 2.125147 CGGATCTCGGCCAGCAAA 60.125 61.111 2.24 0.00 34.75 3.68
932 936 3.074369 TCGGATCTCGGCCAGCAA 61.074 61.111 2.24 0.00 39.77 3.91
933 937 3.531207 CTCGGATCTCGGCCAGCA 61.531 66.667 2.24 0.00 39.77 4.41
935 939 3.038280 CTCTCGGATCTCGGCCAG 58.962 66.667 2.24 0.00 39.77 4.85
937 941 4.335584 CGCTCTCGGATCTCGGCC 62.336 72.222 0.00 0.00 39.77 6.13
939 943 1.595655 TCTCGCTCTCGGATCTCGG 60.596 63.158 0.00 0.00 39.77 4.63
940 944 1.567537 GTCTCGCTCTCGGATCTCG 59.432 63.158 0.00 0.00 40.90 4.04
941 945 1.155424 ACGTCTCGCTCTCGGATCTC 61.155 60.000 0.00 0.00 36.13 2.75
942 946 1.153329 ACGTCTCGCTCTCGGATCT 60.153 57.895 0.00 0.00 36.13 2.75
943 947 1.277440 GACGTCTCGCTCTCGGATC 59.723 63.158 8.70 0.00 36.13 3.36
944 948 2.181521 GGACGTCTCGCTCTCGGAT 61.182 63.158 16.46 0.00 36.13 4.18
945 949 2.818714 GGACGTCTCGCTCTCGGA 60.819 66.667 16.46 0.00 36.13 4.55
959 963 1.153901 TTGCGTCGAGATTCGGGAC 60.154 57.895 0.00 1.47 40.88 4.46
961 965 2.505498 CGTTGCGTCGAGATTCGGG 61.505 63.158 0.00 0.00 40.88 5.14
962 966 2.505498 CCGTTGCGTCGAGATTCGG 61.505 63.158 0.00 0.00 40.88 4.30
963 967 2.987593 CCGTTGCGTCGAGATTCG 59.012 61.111 0.00 0.00 42.10 3.34
966 970 2.809601 GTGCCGTTGCGTCGAGAT 60.810 61.111 0.00 0.00 41.78 2.75
985 989 2.825836 GAATGAGTGCCTGCCGGG 60.826 66.667 2.18 0.00 38.36 5.73
986 990 2.046023 TGAATGAGTGCCTGCCGG 60.046 61.111 0.00 0.00 0.00 6.13
987 991 2.110967 CCTGAATGAGTGCCTGCCG 61.111 63.158 0.00 0.00 0.00 5.69
988 992 0.747283 CTCCTGAATGAGTGCCTGCC 60.747 60.000 0.00 0.00 0.00 4.85
989 993 1.375098 GCTCCTGAATGAGTGCCTGC 61.375 60.000 0.00 0.00 34.74 4.85
991 995 1.220206 CGCTCCTGAATGAGTGCCT 59.780 57.895 0.00 0.00 36.21 4.75
992 996 0.809241 CTCGCTCCTGAATGAGTGCC 60.809 60.000 0.00 0.00 41.56 5.01
993 997 1.427592 GCTCGCTCCTGAATGAGTGC 61.428 60.000 0.00 0.00 41.56 4.40
994 998 1.144565 CGCTCGCTCCTGAATGAGTG 61.145 60.000 0.00 0.00 42.83 3.51
997 1001 1.435105 CTCGCTCGCTCCTGAATGA 59.565 57.895 0.00 0.00 0.00 2.57
998 1002 2.236382 GCTCGCTCGCTCCTGAATG 61.236 63.158 0.00 0.00 0.00 2.67
999 1003 2.105930 GCTCGCTCGCTCCTGAAT 59.894 61.111 0.00 0.00 0.00 2.57
1018 2449 1.817099 GCTAGTGCCTGCATCGCTT 60.817 57.895 7.37 0.00 0.00 4.68
1175 2612 2.892425 CCGCTGGACCGCATCTTC 60.892 66.667 8.64 0.00 0.00 2.87
1353 2790 0.107945 CTTGGAGAGCAGTGGTAGCC 60.108 60.000 0.00 0.00 0.00 3.93
1354 2791 0.610687 ACTTGGAGAGCAGTGGTAGC 59.389 55.000 0.00 0.00 0.00 3.58
1355 2792 1.674221 GCACTTGGAGAGCAGTGGTAG 60.674 57.143 0.00 0.00 40.77 3.18
1356 2793 0.321671 GCACTTGGAGAGCAGTGGTA 59.678 55.000 0.00 0.00 40.77 3.25
1357 2794 1.072159 GCACTTGGAGAGCAGTGGT 59.928 57.895 0.00 0.00 40.77 4.16
1459 2969 2.971307 TCATCAAACATCTGCTACGCA 58.029 42.857 0.00 0.00 36.92 5.24
1486 2996 6.796426 TGATCCTGTAACTAATCTCAACTCG 58.204 40.000 0.00 0.00 0.00 4.18
1499 3009 3.492383 CGATGCTGTCATGATCCTGTAAC 59.508 47.826 0.00 0.00 31.96 2.50
1597 3169 2.651455 GCCAACCTAATTCACCCTACC 58.349 52.381 0.00 0.00 0.00 3.18
1644 3216 1.945394 CAGTGATAGGATTGCCAGTGC 59.055 52.381 0.00 0.00 36.29 4.40
1663 3241 6.252967 ACGCATCACATTTAAAGAACATCA 57.747 33.333 0.00 0.00 0.00 3.07
2234 4021 4.892934 ACACTTGATTTTTGCCCTAAGTCA 59.107 37.500 0.00 0.00 0.00 3.41
2243 4030 5.691305 TGCATACTTGACACTTGATTTTTGC 59.309 36.000 0.00 0.00 0.00 3.68
2474 4268 5.269189 TCCTCAGTGACAATATAGGACACA 58.731 41.667 10.73 0.00 34.47 3.72
2562 4444 5.620206 TCAGCTGGTCTTTTCAATTAGTGA 58.380 37.500 15.13 0.00 0.00 3.41
2637 4519 2.665245 CGAAGCAATGTTGTCGCATCAA 60.665 45.455 0.00 0.00 0.00 2.57
2658 4591 1.896220 TGACCCAACTGCTTGATCAC 58.104 50.000 0.00 0.00 0.00 3.06
2772 4792 5.350365 CCATTTGCAATTCTCCACTGATTTG 59.650 40.000 0.00 0.00 33.20 2.32
3111 5138 9.698309 CAATATGGACTAGTATGAACCTAACTG 57.302 37.037 0.00 0.00 0.00 3.16
3165 5193 8.978472 TGTATCTGGAAGCAATACTAAGTTACT 58.022 33.333 0.00 0.00 0.00 2.24
3217 5374 2.584835 AGCAGTTTGCCCATTACTCA 57.415 45.000 0.00 0.00 46.52 3.41
3349 5562 9.967346 TTTCCTTCTATACAGACAGATAAATCG 57.033 33.333 0.00 0.00 0.00 3.34
3485 5708 4.989279 ACATAATTGACTTCCACCATGC 57.011 40.909 0.00 0.00 0.00 4.06
3490 5713 7.448748 ACAAACCTACATAATTGACTTCCAC 57.551 36.000 0.00 0.00 0.00 4.02
3529 5752 7.147724 CCCCATGACTATGTACTTTAGAGAACA 60.148 40.741 0.00 0.00 32.21 3.18
3619 7280 1.404035 ACAACGCCTGAAGGTTTTCAC 59.596 47.619 0.00 0.00 38.37 3.18
3672 7349 3.153735 GCGAACGCTCTTCAATAAACAC 58.846 45.455 11.97 0.00 38.26 3.32
3801 7482 8.052141 TCCACCATGAAGATTGATTACATGTTA 58.948 33.333 2.30 0.00 37.29 2.41
3864 7548 4.500499 AGCAGCTCTAAACAGATCCATT 57.500 40.909 0.00 0.00 0.00 3.16
3885 7569 5.714333 AGCACACATGTGGGTATTTATCAAA 59.286 36.000 28.11 0.00 45.72 2.69
3897 7584 3.272574 AGATTCCTAGCACACATGTGG 57.727 47.619 28.64 18.29 45.72 4.17
3909 7596 8.960591 GTGATCCAAGAAATGAAAAGATTCCTA 58.039 33.333 0.00 0.00 34.49 2.94
3977 7669 5.084519 AGACACCAGACACATTACTAAGGA 58.915 41.667 0.00 0.00 0.00 3.36
4048 7917 3.889859 ATGTGTTCCATCAGGCCATAT 57.110 42.857 5.01 0.00 33.74 1.78
4054 7923 2.972625 ACGTGTATGTGTTCCATCAGG 58.027 47.619 0.00 0.00 34.86 3.86
4089 9570 8.816894 TGAGAGTTATAGATGAAAAGGAAGTGT 58.183 33.333 0.00 0.00 0.00 3.55
4181 9663 0.040067 GCCAGCTTTGCCGCATATAC 60.040 55.000 0.00 0.00 0.00 1.47
4278 10050 5.893255 TGATCAGGTGCAATAAGCCTTTTAT 59.107 36.000 0.00 0.00 44.83 1.40
4330 10108 5.379187 ACAGGTTCAACGTTTTTATACCCT 58.621 37.500 0.00 0.00 0.00 4.34
4347 10125 2.260822 ACTAGCCATCTGTGACAGGTT 58.739 47.619 13.33 0.00 31.51 3.50
4374 10152 6.818644 TGCCACTTGAGATCTTGTATTCTTAC 59.181 38.462 0.00 0.00 0.00 2.34
4386 10164 2.751259 TGCTCATTTGCCACTTGAGATC 59.249 45.455 7.15 0.00 39.36 2.75
4399 10177 8.579850 TGTATAAACTCCAGAATTGCTCATTT 57.420 30.769 0.00 0.00 0.00 2.32
4410 10188 8.375493 AGACCAACTTATGTATAAACTCCAGA 57.625 34.615 0.00 0.00 0.00 3.86
4411 10189 9.449719 AAAGACCAACTTATGTATAAACTCCAG 57.550 33.333 0.00 0.00 37.93 3.86
4412 10190 9.226606 CAAAGACCAACTTATGTATAAACTCCA 57.773 33.333 0.00 0.00 37.93 3.86
4538 10316 9.021807 CCCTAGGAGTAACGATAAATCTAATGA 57.978 37.037 11.48 0.00 0.00 2.57
4539 10317 8.804204 ACCCTAGGAGTAACGATAAATCTAATG 58.196 37.037 11.48 0.00 0.00 1.90
4540 10318 8.804204 CACCCTAGGAGTAACGATAAATCTAAT 58.196 37.037 11.48 0.00 0.00 1.73
4541 10319 8.000709 TCACCCTAGGAGTAACGATAAATCTAA 58.999 37.037 11.48 0.00 0.00 2.10
4542 10320 7.446625 GTCACCCTAGGAGTAACGATAAATCTA 59.553 40.741 11.48 0.00 0.00 1.98
4543 10321 6.264970 GTCACCCTAGGAGTAACGATAAATCT 59.735 42.308 11.48 0.00 0.00 2.40
4544 10322 6.445475 GTCACCCTAGGAGTAACGATAAATC 58.555 44.000 11.48 0.00 0.00 2.17
4545 10323 5.303845 GGTCACCCTAGGAGTAACGATAAAT 59.696 44.000 11.48 0.00 0.00 1.40
4546 10324 4.646492 GGTCACCCTAGGAGTAACGATAAA 59.354 45.833 11.48 0.00 0.00 1.40
4547 10325 4.210331 GGTCACCCTAGGAGTAACGATAA 58.790 47.826 11.48 0.00 0.00 1.75
4548 10326 3.202818 TGGTCACCCTAGGAGTAACGATA 59.797 47.826 11.48 0.00 0.00 2.92
4549 10327 2.024655 TGGTCACCCTAGGAGTAACGAT 60.025 50.000 11.48 0.00 0.00 3.73
4550 10328 1.355381 TGGTCACCCTAGGAGTAACGA 59.645 52.381 11.48 0.00 0.00 3.85
4551 10329 1.843368 TGGTCACCCTAGGAGTAACG 58.157 55.000 11.48 0.00 0.00 3.18
4552 10330 5.659971 TCTTATTGGTCACCCTAGGAGTAAC 59.340 44.000 11.48 2.60 0.00 2.50
4553 10331 5.845734 TCTTATTGGTCACCCTAGGAGTAA 58.154 41.667 11.48 0.00 0.00 2.24
4554 10332 5.476950 TCTTATTGGTCACCCTAGGAGTA 57.523 43.478 11.48 0.00 0.00 2.59
4555 10333 4.348020 TCTTATTGGTCACCCTAGGAGT 57.652 45.455 11.48 3.42 0.00 3.85
4556 10334 5.896073 AATCTTATTGGTCACCCTAGGAG 57.104 43.478 11.48 2.69 0.00 3.69
4557 10335 6.239887 GCATAATCTTATTGGTCACCCTAGGA 60.240 42.308 11.48 0.00 0.00 2.94
4558 10336 5.940470 GCATAATCTTATTGGTCACCCTAGG 59.060 44.000 0.06 0.06 0.00 3.02
4559 10337 5.940470 GGCATAATCTTATTGGTCACCCTAG 59.060 44.000 0.00 0.00 0.00 3.02
4560 10338 5.610982 AGGCATAATCTTATTGGTCACCCTA 59.389 40.000 0.00 0.00 0.00 3.53
4561 10339 4.416848 AGGCATAATCTTATTGGTCACCCT 59.583 41.667 0.00 0.00 0.00 4.34
4562 10340 4.729868 AGGCATAATCTTATTGGTCACCC 58.270 43.478 0.00 0.00 0.00 4.61
4563 10341 7.885399 AGATAAGGCATAATCTTATTGGTCACC 59.115 37.037 0.00 0.00 37.50 4.02
4564 10342 8.854614 AGATAAGGCATAATCTTATTGGTCAC 57.145 34.615 0.00 0.00 37.50 3.67
4565 10343 9.288576 CAAGATAAGGCATAATCTTATTGGTCA 57.711 33.333 8.17 0.00 37.50 4.02
4566 10344 9.507329 TCAAGATAAGGCATAATCTTATTGGTC 57.493 33.333 8.17 0.00 37.50 4.02
4567 10345 9.289782 GTCAAGATAAGGCATAATCTTATTGGT 57.710 33.333 8.17 0.00 37.50 3.67
4568 10346 9.512588 AGTCAAGATAAGGCATAATCTTATTGG 57.487 33.333 8.17 0.00 37.50 3.16
4572 10350 9.905713 AAACAGTCAAGATAAGGCATAATCTTA 57.094 29.630 8.17 0.00 32.67 2.10
4573 10351 8.814038 AAACAGTCAAGATAAGGCATAATCTT 57.186 30.769 3.91 3.91 34.05 2.40
4576 10354 8.993121 CGATAAACAGTCAAGATAAGGCATAAT 58.007 33.333 0.00 0.00 0.00 1.28
4577 10355 7.985184 ACGATAAACAGTCAAGATAAGGCATAA 59.015 33.333 0.00 0.00 0.00 1.90
4578 10356 7.497595 ACGATAAACAGTCAAGATAAGGCATA 58.502 34.615 0.00 0.00 0.00 3.14
4579 10357 6.349300 ACGATAAACAGTCAAGATAAGGCAT 58.651 36.000 0.00 0.00 0.00 4.40
4580 10358 5.730550 ACGATAAACAGTCAAGATAAGGCA 58.269 37.500 0.00 0.00 0.00 4.75
4581 10359 6.663944 AACGATAAACAGTCAAGATAAGGC 57.336 37.500 0.00 0.00 0.00 4.35
4582 10360 7.119262 ACCAAACGATAAACAGTCAAGATAAGG 59.881 37.037 0.00 0.00 0.00 2.69
4583 10361 8.029642 ACCAAACGATAAACAGTCAAGATAAG 57.970 34.615 0.00 0.00 0.00 1.73
4584 10362 7.658167 TGACCAAACGATAAACAGTCAAGATAA 59.342 33.333 0.00 0.00 30.35 1.75
4585 10363 7.156000 TGACCAAACGATAAACAGTCAAGATA 58.844 34.615 0.00 0.00 30.35 1.98
4586 10364 5.995282 TGACCAAACGATAAACAGTCAAGAT 59.005 36.000 0.00 0.00 30.35 2.40
4587 10365 5.361427 TGACCAAACGATAAACAGTCAAGA 58.639 37.500 0.00 0.00 30.35 3.02
4588 10366 5.465390 TCTGACCAAACGATAAACAGTCAAG 59.535 40.000 0.00 0.00 32.82 3.02
4589 10367 5.361427 TCTGACCAAACGATAAACAGTCAA 58.639 37.500 0.00 0.00 32.82 3.18
4590 10368 4.951254 TCTGACCAAACGATAAACAGTCA 58.049 39.130 0.00 0.00 0.00 3.41
4591 10369 6.481954 AATCTGACCAAACGATAAACAGTC 57.518 37.500 0.00 0.00 0.00 3.51
4592 10370 6.877611 AAATCTGACCAAACGATAAACAGT 57.122 33.333 0.00 0.00 0.00 3.55
4593 10371 9.277565 CAATAAATCTGACCAAACGATAAACAG 57.722 33.333 0.00 0.00 0.00 3.16
4594 10372 7.753132 GCAATAAATCTGACCAAACGATAAACA 59.247 33.333 0.00 0.00 0.00 2.83
4595 10373 7.968405 AGCAATAAATCTGACCAAACGATAAAC 59.032 33.333 0.00 0.00 0.00 2.01
4596 10374 8.050778 AGCAATAAATCTGACCAAACGATAAA 57.949 30.769 0.00 0.00 0.00 1.40
4597 10375 7.552687 AGAGCAATAAATCTGACCAAACGATAA 59.447 33.333 0.00 0.00 0.00 1.75
4598 10376 7.047891 AGAGCAATAAATCTGACCAAACGATA 58.952 34.615 0.00 0.00 0.00 2.92
4599 10377 5.882557 AGAGCAATAAATCTGACCAAACGAT 59.117 36.000 0.00 0.00 0.00 3.73
4600 10378 5.245531 AGAGCAATAAATCTGACCAAACGA 58.754 37.500 0.00 0.00 0.00 3.85
4601 10379 5.122239 TGAGAGCAATAAATCTGACCAAACG 59.878 40.000 0.00 0.00 0.00 3.60
4602 10380 6.072508 TGTGAGAGCAATAAATCTGACCAAAC 60.073 38.462 0.00 0.00 29.70 2.93
4603 10381 6.003326 TGTGAGAGCAATAAATCTGACCAAA 58.997 36.000 0.00 0.00 29.70 3.28
4604 10382 5.559770 TGTGAGAGCAATAAATCTGACCAA 58.440 37.500 0.00 0.00 29.70 3.67
4605 10383 5.164620 TGTGAGAGCAATAAATCTGACCA 57.835 39.130 0.00 0.00 29.70 4.02
4606 10384 5.448360 GCTTGTGAGAGCAATAAATCTGACC 60.448 44.000 0.00 0.00 42.25 4.02
4607 10385 5.448360 GGCTTGTGAGAGCAATAAATCTGAC 60.448 44.000 0.00 0.00 44.49 3.51
4608 10386 4.637534 GGCTTGTGAGAGCAATAAATCTGA 59.362 41.667 0.00 0.00 44.49 3.27
4609 10387 4.397103 TGGCTTGTGAGAGCAATAAATCTG 59.603 41.667 0.00 0.00 44.49 2.90
4610 10388 4.592942 TGGCTTGTGAGAGCAATAAATCT 58.407 39.130 0.00 0.00 44.49 2.40
4611 10389 4.970662 TGGCTTGTGAGAGCAATAAATC 57.029 40.909 0.00 0.00 44.49 2.17
4612 10390 5.927281 AATGGCTTGTGAGAGCAATAAAT 57.073 34.783 0.00 0.00 44.49 1.40
4613 10391 5.726980 AAATGGCTTGTGAGAGCAATAAA 57.273 34.783 0.00 0.00 44.49 1.40
4614 10392 6.238456 CGATAAATGGCTTGTGAGAGCAATAA 60.238 38.462 0.00 0.00 44.49 1.40
4615 10393 5.237127 CGATAAATGGCTTGTGAGAGCAATA 59.763 40.000 0.00 0.00 44.49 1.90
4616 10394 4.036027 CGATAAATGGCTTGTGAGAGCAAT 59.964 41.667 0.00 0.00 44.49 3.56
4617 10395 3.374988 CGATAAATGGCTTGTGAGAGCAA 59.625 43.478 0.00 0.00 44.49 3.91
4618 10396 2.938451 CGATAAATGGCTTGTGAGAGCA 59.062 45.455 0.00 0.00 44.49 4.26
4619 10397 3.198068 TCGATAAATGGCTTGTGAGAGC 58.802 45.455 0.00 0.00 41.96 4.09
4620 10398 4.686972 TCTCGATAAATGGCTTGTGAGAG 58.313 43.478 0.00 0.00 0.00 3.20
4621 10399 4.736126 TCTCGATAAATGGCTTGTGAGA 57.264 40.909 0.00 0.00 0.00 3.27
4622 10400 5.757320 AGATTCTCGATAAATGGCTTGTGAG 59.243 40.000 0.00 0.00 0.00 3.51
4623 10401 5.674525 AGATTCTCGATAAATGGCTTGTGA 58.325 37.500 0.00 0.00 0.00 3.58
4624 10402 5.998454 AGATTCTCGATAAATGGCTTGTG 57.002 39.130 0.00 0.00 0.00 3.33
4625 10403 6.703607 CAGTAGATTCTCGATAAATGGCTTGT 59.296 38.462 0.00 0.00 0.00 3.16
4626 10404 6.925718 TCAGTAGATTCTCGATAAATGGCTTG 59.074 38.462 0.00 0.00 0.00 4.01
4627 10405 7.055667 TCAGTAGATTCTCGATAAATGGCTT 57.944 36.000 0.00 0.00 0.00 4.35
4628 10406 6.656632 TCAGTAGATTCTCGATAAATGGCT 57.343 37.500 0.00 0.00 0.00 4.75
4629 10407 8.988064 TTATCAGTAGATTCTCGATAAATGGC 57.012 34.615 9.17 0.00 35.67 4.40
4635 10413 8.391859 GCTCGATTTATCAGTAGATTCTCGATA 58.608 37.037 0.00 0.00 36.99 2.92
4636 10414 7.247728 GCTCGATTTATCAGTAGATTCTCGAT 58.752 38.462 0.00 0.00 36.99 3.59
4637 10415 6.348622 GGCTCGATTTATCAGTAGATTCTCGA 60.349 42.308 0.00 0.00 36.13 4.04
4638 10416 5.797934 GGCTCGATTTATCAGTAGATTCTCG 59.202 44.000 0.00 0.00 35.67 4.04
4639 10417 6.919721 AGGCTCGATTTATCAGTAGATTCTC 58.080 40.000 0.00 0.00 35.67 2.87
4640 10418 6.909550 AGGCTCGATTTATCAGTAGATTCT 57.090 37.500 0.00 0.00 35.67 2.40
4641 10419 9.646427 AAATAGGCTCGATTTATCAGTAGATTC 57.354 33.333 0.00 0.00 35.67 2.52
4642 10420 9.646427 GAAATAGGCTCGATTTATCAGTAGATT 57.354 33.333 0.00 0.00 35.67 2.40
4643 10421 9.030452 AGAAATAGGCTCGATTTATCAGTAGAT 57.970 33.333 0.00 0.00 38.29 1.98
4644 10422 8.410673 AGAAATAGGCTCGATTTATCAGTAGA 57.589 34.615 0.00 0.00 0.00 2.59
4645 10423 9.781834 CTAGAAATAGGCTCGATTTATCAGTAG 57.218 37.037 0.00 0.00 0.00 2.57
4646 10424 8.244802 GCTAGAAATAGGCTCGATTTATCAGTA 58.755 37.037 0.00 0.00 0.00 2.74
4647 10425 7.093992 GCTAGAAATAGGCTCGATTTATCAGT 58.906 38.462 0.00 0.00 0.00 3.41
4648 10426 7.062839 GTGCTAGAAATAGGCTCGATTTATCAG 59.937 40.741 0.00 0.00 0.00 2.90
4649 10427 6.868864 GTGCTAGAAATAGGCTCGATTTATCA 59.131 38.462 0.00 0.00 0.00 2.15
4650 10428 7.093992 AGTGCTAGAAATAGGCTCGATTTATC 58.906 38.462 0.00 0.00 0.00 1.75
4651 10429 6.998802 AGTGCTAGAAATAGGCTCGATTTAT 58.001 36.000 0.00 0.00 0.00 1.40
4652 10430 6.406692 AGTGCTAGAAATAGGCTCGATTTA 57.593 37.500 0.00 0.00 0.00 1.40
4653 10431 5.283457 AGTGCTAGAAATAGGCTCGATTT 57.717 39.130 0.00 0.00 0.00 2.17
4654 10432 4.946478 AGTGCTAGAAATAGGCTCGATT 57.054 40.909 0.00 0.00 0.00 3.34
4655 10433 6.597832 AATAGTGCTAGAAATAGGCTCGAT 57.402 37.500 0.00 0.00 0.00 3.59
4656 10434 6.406692 AAATAGTGCTAGAAATAGGCTCGA 57.593 37.500 0.00 0.00 0.00 4.04
4657 10435 7.484035 AAAAATAGTGCTAGAAATAGGCTCG 57.516 36.000 0.00 0.00 0.00 5.03
4687 10465 9.114952 CCCCAAAACACAAATAAACATAGTTTT 57.885 29.630 0.03 0.00 37.97 2.43
4688 10466 8.487028 TCCCCAAAACACAAATAAACATAGTTT 58.513 29.630 0.51 0.51 0.00 2.66
4689 10467 7.929245 GTCCCCAAAACACAAATAAACATAGTT 59.071 33.333 0.00 0.00 0.00 2.24
4690 10468 7.438564 GTCCCCAAAACACAAATAAACATAGT 58.561 34.615 0.00 0.00 0.00 2.12
4691 10469 6.871492 GGTCCCCAAAACACAAATAAACATAG 59.129 38.462 0.00 0.00 0.00 2.23
4692 10470 6.555360 AGGTCCCCAAAACACAAATAAACATA 59.445 34.615 0.00 0.00 0.00 2.29
4693 10471 5.368230 AGGTCCCCAAAACACAAATAAACAT 59.632 36.000 0.00 0.00 0.00 2.71
4694 10472 4.717280 AGGTCCCCAAAACACAAATAAACA 59.283 37.500 0.00 0.00 0.00 2.83
4695 10473 5.284861 AGGTCCCCAAAACACAAATAAAC 57.715 39.130 0.00 0.00 0.00 2.01
4696 10474 5.959583 AAGGTCCCCAAAACACAAATAAA 57.040 34.783 0.00 0.00 0.00 1.40
4697 10475 7.619512 AATAAGGTCCCCAAAACACAAATAA 57.380 32.000 0.00 0.00 0.00 1.40
4698 10476 8.722622 TTAATAAGGTCCCCAAAACACAAATA 57.277 30.769 0.00 0.00 0.00 1.40
4699 10477 7.619512 TTAATAAGGTCCCCAAAACACAAAT 57.380 32.000 0.00 0.00 0.00 2.32
4700 10478 6.463190 GCTTAATAAGGTCCCCAAAACACAAA 60.463 38.462 1.88 0.00 0.00 2.83
4701 10479 5.011227 GCTTAATAAGGTCCCCAAAACACAA 59.989 40.000 1.88 0.00 0.00 3.33
4702 10480 4.525100 GCTTAATAAGGTCCCCAAAACACA 59.475 41.667 1.88 0.00 0.00 3.72
4703 10481 4.525100 TGCTTAATAAGGTCCCCAAAACAC 59.475 41.667 1.88 0.00 0.00 3.32
4704 10482 4.742012 TGCTTAATAAGGTCCCCAAAACA 58.258 39.130 1.88 0.00 0.00 2.83
4705 10483 5.731957 TTGCTTAATAAGGTCCCCAAAAC 57.268 39.130 1.88 0.00 0.00 2.43
4706 10484 7.621683 ACATATTGCTTAATAAGGTCCCCAAAA 59.378 33.333 1.88 0.00 0.00 2.44
4707 10485 7.129425 ACATATTGCTTAATAAGGTCCCCAAA 58.871 34.615 1.88 0.00 0.00 3.28
4708 10486 6.678547 ACATATTGCTTAATAAGGTCCCCAA 58.321 36.000 1.88 0.00 0.00 4.12
4709 10487 6.274322 ACATATTGCTTAATAAGGTCCCCA 57.726 37.500 1.88 0.00 0.00 4.96
4710 10488 7.228590 TGTACATATTGCTTAATAAGGTCCCC 58.771 38.462 1.88 0.00 0.00 4.81
4711 10489 8.685838 TTGTACATATTGCTTAATAAGGTCCC 57.314 34.615 0.00 0.00 0.00 4.46
4724 10502 9.801873 ACAAAATAGGACAATTGTACATATTGC 57.198 29.630 22.75 15.99 36.65 3.56
4729 10507 9.691362 GACAAACAAAATAGGACAATTGTACAT 57.309 29.630 22.75 11.07 35.09 2.29
4730 10508 8.687242 TGACAAACAAAATAGGACAATTGTACA 58.313 29.630 22.75 9.24 35.09 2.90
4731 10509 9.691362 ATGACAAACAAAATAGGACAATTGTAC 57.309 29.630 13.29 13.29 35.09 2.90
4747 10525 9.904198 TCTGAATCCTGATATAATGACAAACAA 57.096 29.630 0.00 0.00 0.00 2.83
4748 10526 9.551734 CTCTGAATCCTGATATAATGACAAACA 57.448 33.333 0.00 0.00 0.00 2.83
4749 10527 8.997323 CCTCTGAATCCTGATATAATGACAAAC 58.003 37.037 0.00 0.00 0.00 2.93
4750 10528 7.663081 GCCTCTGAATCCTGATATAATGACAAA 59.337 37.037 0.00 0.00 0.00 2.83
4751 10529 7.016957 AGCCTCTGAATCCTGATATAATGACAA 59.983 37.037 0.00 0.00 0.00 3.18
4752 10530 6.499699 AGCCTCTGAATCCTGATATAATGACA 59.500 38.462 0.00 0.00 0.00 3.58
4753 10531 6.945218 AGCCTCTGAATCCTGATATAATGAC 58.055 40.000 0.00 0.00 0.00 3.06
4754 10532 7.675619 TGTAGCCTCTGAATCCTGATATAATGA 59.324 37.037 0.00 0.00 0.00 2.57
4755 10533 7.845037 TGTAGCCTCTGAATCCTGATATAATG 58.155 38.462 0.00 0.00 0.00 1.90
4756 10534 8.441311 TTGTAGCCTCTGAATCCTGATATAAT 57.559 34.615 0.00 0.00 0.00 1.28
4757 10535 7.855784 TTGTAGCCTCTGAATCCTGATATAA 57.144 36.000 0.00 0.00 0.00 0.98
4758 10536 7.855784 TTTGTAGCCTCTGAATCCTGATATA 57.144 36.000 0.00 0.00 0.00 0.86
4759 10537 6.753913 TTTGTAGCCTCTGAATCCTGATAT 57.246 37.500 0.00 0.00 0.00 1.63
4760 10538 6.327365 TCATTTGTAGCCTCTGAATCCTGATA 59.673 38.462 0.00 0.00 0.00 2.15
4761 10539 5.131642 TCATTTGTAGCCTCTGAATCCTGAT 59.868 40.000 0.00 0.00 0.00 2.90
4762 10540 4.471025 TCATTTGTAGCCTCTGAATCCTGA 59.529 41.667 0.00 0.00 0.00 3.86
4763 10541 4.774124 TCATTTGTAGCCTCTGAATCCTG 58.226 43.478 0.00 0.00 0.00 3.86
4764 10542 5.435291 CTTCATTTGTAGCCTCTGAATCCT 58.565 41.667 0.00 0.00 0.00 3.24
4765 10543 4.578105 CCTTCATTTGTAGCCTCTGAATCC 59.422 45.833 0.00 0.00 0.00 3.01
4766 10544 5.189180 ACCTTCATTTGTAGCCTCTGAATC 58.811 41.667 0.00 0.00 0.00 2.52
4767 10545 5.184892 ACCTTCATTTGTAGCCTCTGAAT 57.815 39.130 0.00 0.00 0.00 2.57
4768 10546 4.640771 ACCTTCATTTGTAGCCTCTGAA 57.359 40.909 0.00 0.00 0.00 3.02
4769 10547 5.755409 TTACCTTCATTTGTAGCCTCTGA 57.245 39.130 0.00 0.00 0.00 3.27
4770 10548 7.275920 AGTATTACCTTCATTTGTAGCCTCTG 58.724 38.462 0.00 0.00 0.00 3.35
4771 10549 7.439108 AGTATTACCTTCATTTGTAGCCTCT 57.561 36.000 0.00 0.00 0.00 3.69
4772 10550 7.988028 AGAAGTATTACCTTCATTTGTAGCCTC 59.012 37.037 3.99 0.00 42.68 4.70
4773 10551 7.770897 CAGAAGTATTACCTTCATTTGTAGCCT 59.229 37.037 3.99 0.00 42.68 4.58
4774 10552 7.553044 ACAGAAGTATTACCTTCATTTGTAGCC 59.447 37.037 3.99 0.00 42.68 3.93
4775 10553 8.494016 ACAGAAGTATTACCTTCATTTGTAGC 57.506 34.615 3.99 0.00 42.68 3.58
4776 10554 9.099454 GGACAGAAGTATTACCTTCATTTGTAG 57.901 37.037 3.99 0.00 42.68 2.74
4777 10555 8.598916 TGGACAGAAGTATTACCTTCATTTGTA 58.401 33.333 3.99 0.00 42.68 2.41
4778 10556 7.458397 TGGACAGAAGTATTACCTTCATTTGT 58.542 34.615 3.99 0.09 42.68 2.83
4779 10557 7.921786 TGGACAGAAGTATTACCTTCATTTG 57.078 36.000 3.99 0.00 42.68 2.32
4802 10580 5.060427 TCCCAGGTTCCCAACATATATTG 57.940 43.478 0.00 0.00 0.00 1.90
4803 10581 5.948481 ATCCCAGGTTCCCAACATATATT 57.052 39.130 0.00 0.00 0.00 1.28
4804 10582 5.948481 AATCCCAGGTTCCCAACATATAT 57.052 39.130 0.00 0.00 0.00 0.86
4805 10583 5.454062 CAAATCCCAGGTTCCCAACATATA 58.546 41.667 0.00 0.00 0.00 0.86
4806 10584 4.289245 CAAATCCCAGGTTCCCAACATAT 58.711 43.478 0.00 0.00 0.00 1.78
4807 10585 3.707316 CAAATCCCAGGTTCCCAACATA 58.293 45.455 0.00 0.00 0.00 2.29
4808 10586 2.539302 CAAATCCCAGGTTCCCAACAT 58.461 47.619 0.00 0.00 0.00 2.71
4809 10587 2.008242 CAAATCCCAGGTTCCCAACA 57.992 50.000 0.00 0.00 0.00 3.33
4810 10588 0.608130 GCAAATCCCAGGTTCCCAAC 59.392 55.000 0.00 0.00 0.00 3.77
4811 10589 0.189574 TGCAAATCCCAGGTTCCCAA 59.810 50.000 0.00 0.00 0.00 4.12
4812 10590 0.189574 TTGCAAATCCCAGGTTCCCA 59.810 50.000 0.00 0.00 0.00 4.37
4813 10591 1.347062 TTTGCAAATCCCAGGTTCCC 58.653 50.000 8.05 0.00 0.00 3.97
4814 10592 3.483808 TTTTTGCAAATCCCAGGTTCC 57.516 42.857 13.65 0.00 0.00 3.62
4840 10618 7.073883 TGATTTTATCGACCGACTACTAATCG 58.926 38.462 0.00 0.00 39.33 3.34
4841 10619 8.792831 TTGATTTTATCGACCGACTACTAATC 57.207 34.615 0.00 2.02 0.00 1.75
4842 10620 9.760077 AATTGATTTTATCGACCGACTACTAAT 57.240 29.630 0.00 0.00 0.00 1.73
4845 10623 9.760077 ATTAATTGATTTTATCGACCGACTACT 57.240 29.630 0.00 0.00 0.00 2.57
4847 10625 8.908678 CGATTAATTGATTTTATCGACCGACTA 58.091 33.333 11.97 0.00 32.52 2.59
4848 10626 7.650504 TCGATTAATTGATTTTATCGACCGACT 59.349 33.333 14.29 0.00 34.71 4.18
4849 10627 7.780313 TCGATTAATTGATTTTATCGACCGAC 58.220 34.615 14.29 0.00 34.71 4.79
4850 10628 7.933728 TCGATTAATTGATTTTATCGACCGA 57.066 32.000 14.29 0.00 34.71 4.69
4883 10661 9.796120 GGTCATCCTAGAATTAGAGATTAATCG 57.204 37.037 9.78 0.00 0.00 3.34
4884 10662 9.796120 CGGTCATCCTAGAATTAGAGATTAATC 57.204 37.037 7.41 7.41 0.00 1.75
4885 10663 9.535170 TCGGTCATCCTAGAATTAGAGATTAAT 57.465 33.333 0.00 0.00 0.00 1.40
4886 10664 8.935614 TCGGTCATCCTAGAATTAGAGATTAA 57.064 34.615 0.00 0.00 0.00 1.40
4887 10665 8.383947 TCTCGGTCATCCTAGAATTAGAGATTA 58.616 37.037 0.00 0.00 33.46 1.75
4888 10666 7.175990 GTCTCGGTCATCCTAGAATTAGAGATT 59.824 40.741 0.00 0.00 37.30 2.40
4889 10667 6.657541 GTCTCGGTCATCCTAGAATTAGAGAT 59.342 42.308 0.00 0.00 37.30 2.75
4890 10668 5.998981 GTCTCGGTCATCCTAGAATTAGAGA 59.001 44.000 0.00 0.00 37.30 3.10
4891 10669 5.106869 CGTCTCGGTCATCCTAGAATTAGAG 60.107 48.000 0.00 0.00 37.30 2.43
4892 10670 4.755629 CGTCTCGGTCATCCTAGAATTAGA 59.244 45.833 0.00 0.00 37.30 2.10
4893 10671 4.614078 GCGTCTCGGTCATCCTAGAATTAG 60.614 50.000 0.00 0.00 37.30 1.73
4894 10672 3.252701 GCGTCTCGGTCATCCTAGAATTA 59.747 47.826 0.00 0.00 37.30 1.40
4895 10673 2.034812 GCGTCTCGGTCATCCTAGAATT 59.965 50.000 0.00 0.00 37.30 2.17
4896 10674 1.609555 GCGTCTCGGTCATCCTAGAAT 59.390 52.381 0.00 0.00 37.30 2.40
4897 10675 1.022735 GCGTCTCGGTCATCCTAGAA 58.977 55.000 0.00 0.00 37.30 2.10
4898 10676 0.180642 AGCGTCTCGGTCATCCTAGA 59.819 55.000 0.00 0.00 33.90 2.43
4899 10677 1.880271 TAGCGTCTCGGTCATCCTAG 58.120 55.000 0.00 0.00 38.83 3.02
4900 10678 1.945394 GTTAGCGTCTCGGTCATCCTA 59.055 52.381 0.00 0.00 38.83 2.94
4901 10679 0.739561 GTTAGCGTCTCGGTCATCCT 59.260 55.000 0.00 0.00 38.83 3.24
4902 10680 0.454600 TGTTAGCGTCTCGGTCATCC 59.545 55.000 0.00 0.00 38.83 3.51
4903 10681 2.273370 TTGTTAGCGTCTCGGTCATC 57.727 50.000 0.00 0.00 38.83 2.92
4904 10682 2.961526 ATTGTTAGCGTCTCGGTCAT 57.038 45.000 0.00 0.00 38.83 3.06
4905 10683 3.766151 CTTATTGTTAGCGTCTCGGTCA 58.234 45.455 0.00 0.00 38.83 4.02
4906 10684 2.534757 GCTTATTGTTAGCGTCTCGGTC 59.465 50.000 0.00 0.00 38.83 4.79
4907 10685 2.537401 GCTTATTGTTAGCGTCTCGGT 58.463 47.619 0.00 0.00 41.50 4.69
4915 10693 7.851508 TGTTGAGAATATCGCTTATTGTTAGC 58.148 34.615 0.00 0.00 30.44 3.09
4918 10696 7.645340 GCAATGTTGAGAATATCGCTTATTGTT 59.355 33.333 0.00 0.00 30.44 2.83
4919 10697 7.012704 AGCAATGTTGAGAATATCGCTTATTGT 59.987 33.333 0.00 0.00 30.44 2.71
4920 10698 7.358066 AGCAATGTTGAGAATATCGCTTATTG 58.642 34.615 0.00 0.00 30.44 1.90
4921 10699 7.502120 AGCAATGTTGAGAATATCGCTTATT 57.498 32.000 0.00 0.00 33.06 1.40
4922 10700 7.012704 ACAAGCAATGTTGAGAATATCGCTTAT 59.987 33.333 0.00 0.00 40.06 1.73
4923 10701 6.316140 ACAAGCAATGTTGAGAATATCGCTTA 59.684 34.615 0.00 0.00 40.06 3.09
4924 10702 5.124457 ACAAGCAATGTTGAGAATATCGCTT 59.876 36.000 0.00 0.00 40.06 4.68
4925 10703 4.637534 ACAAGCAATGTTGAGAATATCGCT 59.362 37.500 0.00 0.00 40.06 4.93
4926 10704 4.913376 ACAAGCAATGTTGAGAATATCGC 58.087 39.130 0.00 0.00 40.06 4.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.