Multiple sequence alignment - TraesCS5A01G043300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G043300 chr5A 100.000 3147 0 0 3231 6377 39735480 39738626 0.000000e+00 5812.0
1 TraesCS5A01G043300 chr5A 100.000 3048 0 0 1 3048 39732250 39735297 0.000000e+00 5629.0
2 TraesCS5A01G043300 chr5A 91.584 202 13 3 3434 3634 35659896 35660094 6.300000e-70 276.0
3 TraesCS5A01G043300 chr5A 91.304 46 3 1 5979 6024 414828930 414828886 1.920000e-05 62.1
4 TraesCS5A01G043300 chr5D 91.255 2916 167 42 1 2856 50318305 50321192 0.000000e+00 3892.0
5 TraesCS5A01G043300 chr5D 91.410 2433 121 48 3624 5992 50321585 50323993 0.000000e+00 3254.0
6 TraesCS5A01G043300 chr5D 97.129 209 6 0 3231 3439 50321385 50321593 2.830000e-93 353.0
7 TraesCS5A01G043300 chr5D 93.953 215 7 4 6167 6377 50324123 50324335 2.870000e-83 320.0
8 TraesCS5A01G043300 chr5D 93.684 190 7 3 3437 3624 521487803 521487989 4.870000e-71 279.0
9 TraesCS5A01G043300 chr5D 95.862 145 6 0 2902 3046 50321209 50321353 1.070000e-57 235.0
10 TraesCS5A01G043300 chr5B 92.970 1522 63 17 1548 3048 53020587 53022085 0.000000e+00 2178.0
11 TraesCS5A01G043300 chr5B 91.098 1539 81 21 5 1521 53019109 53020613 0.000000e+00 2032.0
12 TraesCS5A01G043300 chr5B 92.502 1307 51 16 3624 4905 53022314 53023598 0.000000e+00 1827.0
13 TraesCS5A01G043300 chr5B 92.100 1076 59 18 4928 5986 53023725 53024791 0.000000e+00 1493.0
14 TraesCS5A01G043300 chr5B 93.333 240 10 4 6142 6377 53024816 53025053 3.660000e-92 350.0
15 TraesCS5A01G043300 chr5B 94.608 204 10 1 3235 3438 53022119 53022321 1.330000e-81 315.0
16 TraesCS5A01G043300 chr4D 86.353 894 86 21 1057 1946 11858481 11859342 0.000000e+00 942.0
17 TraesCS5A01G043300 chr4D 82.292 288 27 15 1057 1335 385739444 385739716 1.790000e-55 228.0
18 TraesCS5A01G043300 chr4D 97.297 37 1 0 5988 6024 207559468 207559504 5.340000e-06 63.9
19 TraesCS5A01G043300 chr4A 86.215 885 87 20 1065 1946 590664661 590663809 0.000000e+00 926.0
20 TraesCS5A01G043300 chr4A 96.257 187 3 2 3440 3625 678341441 678341624 2.890000e-78 303.0
21 TraesCS5A01G043300 chr4A 95.187 187 4 2 3440 3624 619148448 619148265 2.250000e-74 291.0
22 TraesCS5A01G043300 chr4A 81.716 268 27 14 1076 1335 67175040 67175293 3.010000e-48 204.0
23 TraesCS5A01G043300 chr4A 85.500 200 20 6 2856 3048 488250299 488250496 3.900000e-47 200.0
24 TraesCS5A01G043300 chr4B 88.127 598 54 8 1060 1649 21941082 21940494 0.000000e+00 695.0
25 TraesCS5A01G043300 chr4B 80.623 289 33 13 1057 1335 472392671 472392946 1.080000e-47 202.0
26 TraesCS5A01G043300 chr6B 84.181 531 51 19 1077 1599 382771875 382771370 9.610000e-133 484.0
27 TraesCS5A01G043300 chr6B 97.368 38 0 1 5988 6024 91852853 91852816 5.340000e-06 63.9
28 TraesCS5A01G043300 chr6D 82.987 529 53 16 1079 1596 223941596 223942098 1.630000e-120 444.0
29 TraesCS5A01G043300 chr6D 93.750 192 8 3 3438 3628 406395566 406395378 1.050000e-72 285.0
30 TraesCS5A01G043300 chr6D 91.765 85 6 1 1583 1666 223942117 223942201 4.040000e-22 117.0
31 TraesCS5A01G043300 chr2D 94.241 191 6 2 3437 3627 101884249 101884064 2.910000e-73 287.0
32 TraesCS5A01G043300 chr2D 97.297 37 1 0 5988 6024 260602495 260602531 5.340000e-06 63.9
33 TraesCS5A01G043300 chr2B 95.135 185 3 2 3441 3624 359319637 359319816 2.910000e-73 287.0
34 TraesCS5A01G043300 chr7D 93.717 191 6 2 3439 3627 629623712 629623526 1.350000e-71 281.0
35 TraesCS5A01G043300 chr7D 89.041 146 15 1 2856 3000 541964182 541964037 5.080000e-41 180.0
36 TraesCS5A01G043300 chr7D 83.562 146 20 4 2857 3000 58158975 58158832 4.010000e-27 134.0
37 TraesCS5A01G043300 chr7D 97.500 40 1 0 5985 6024 583455877 583455838 1.150000e-07 69.4
38 TraesCS5A01G043300 chr7D 97.297 37 1 0 5988 6024 575530594 575530558 5.340000e-06 63.9
39 TraesCS5A01G043300 chr7B 94.118 187 7 2 3438 3624 606591083 606591265 1.350000e-71 281.0
40 TraesCS5A01G043300 chr3D 88.095 126 14 1 2857 2982 1874879 1875003 1.430000e-31 148.0
41 TraesCS5A01G043300 chr3B 87.719 114 13 1 2857 2970 5063370 5063482 1.440000e-26 132.0
42 TraesCS5A01G043300 chr3B 97.368 38 1 0 5987 6024 407469015 407469052 1.480000e-06 65.8
43 TraesCS5A01G043300 chr6A 91.765 85 6 1 1583 1666 277279103 277279187 4.040000e-22 117.0
44 TraesCS5A01G043300 chr6A 100.000 35 0 0 5992 6026 575365268 575365302 1.480000e-06 65.8
45 TraesCS5A01G043300 chr1D 83.206 131 18 3 2859 2988 399036681 399036808 4.040000e-22 117.0
46 TraesCS5A01G043300 chr1D 100.000 35 0 0 1320 1354 222339407 222339373 1.480000e-06 65.8
47 TraesCS5A01G043300 chr3A 80.357 168 20 8 2890 3047 46168418 46168254 1.450000e-21 115.0
48 TraesCS5A01G043300 chr1B 97.436 39 1 0 5986 6024 134955370 134955408 4.130000e-07 67.6
49 TraesCS5A01G043300 chr1A 100.000 35 0 0 1320 1354 288513061 288513027 1.480000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G043300 chr5A 39732250 39738626 6376 False 5720.500000 5812 100.0000 1 6377 2 chr5A.!!$F2 6376
1 TraesCS5A01G043300 chr5D 50318305 50324335 6030 False 1610.800000 3892 93.9218 1 6377 5 chr5D.!!$F2 6376
2 TraesCS5A01G043300 chr5B 53019109 53025053 5944 False 1365.833333 2178 92.7685 5 6377 6 chr5B.!!$F1 6372
3 TraesCS5A01G043300 chr4D 11858481 11859342 861 False 942.000000 942 86.3530 1057 1946 1 chr4D.!!$F1 889
4 TraesCS5A01G043300 chr4A 590663809 590664661 852 True 926.000000 926 86.2150 1065 1946 1 chr4A.!!$R1 881
5 TraesCS5A01G043300 chr4B 21940494 21941082 588 True 695.000000 695 88.1270 1060 1649 1 chr4B.!!$R1 589
6 TraesCS5A01G043300 chr6B 382771370 382771875 505 True 484.000000 484 84.1810 1077 1599 1 chr6B.!!$R2 522
7 TraesCS5A01G043300 chr6D 223941596 223942201 605 False 280.500000 444 87.3760 1079 1666 2 chr6D.!!$F1 587

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
97 104 0.185175 AAGCACCCGGAAGTTTCCTT 59.815 50.000 0.73 0.0 45.33 3.36 F
1413 1514 0.179045 CCCTCACCCATGGACGATTC 60.179 60.000 15.22 0.0 0.00 2.52 F
1793 1940 0.824109 GGCTGTTATTTGGCTTCCCC 59.176 55.000 0.00 0.0 0.00 4.81 F
1940 2092 1.396996 CGAATTAGACGGCAGTTTGGG 59.603 52.381 0.00 0.0 0.00 4.12 F
2957 3119 1.597937 GGCAAGTTCAGTTGACAAGCG 60.598 52.381 0.00 0.0 35.30 4.68 F
4588 4772 0.692476 AGTGCACAACAGATAGGGCA 59.308 50.000 21.04 0.0 0.00 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2014 2166 0.613260 CACACTGCCCTGCCTAGTAA 59.387 55.000 0.00 0.0 0.00 2.24 R
2447 2604 0.674895 CTTCCTGGTTCCCTTGAGCG 60.675 60.000 0.00 0.0 0.00 5.03 R
3626 3788 0.608856 TGCGAACTGTGGCATTGGAT 60.609 50.000 3.02 0.0 32.99 3.41 R
3627 3789 0.608856 ATGCGAACTGTGGCATTGGA 60.609 50.000 12.24 0.0 45.88 3.53 R
4798 4984 1.888512 GGAAGCACAAATCTGCCTTCA 59.111 47.619 0.00 0.0 37.96 3.02 R
5448 5744 0.104855 TGCCAGCGCGATTCTATCTT 59.895 50.000 12.10 0.0 38.08 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
91 98 2.193536 GCAACAAGCACCCGGAAGT 61.194 57.895 0.73 0.00 44.79 3.01
92 99 1.734388 GCAACAAGCACCCGGAAGTT 61.734 55.000 0.73 0.00 44.79 2.66
93 100 0.744281 CAACAAGCACCCGGAAGTTT 59.256 50.000 0.73 0.00 0.00 2.66
94 101 1.029681 AACAAGCACCCGGAAGTTTC 58.970 50.000 0.73 0.00 0.00 2.78
95 102 0.822121 ACAAGCACCCGGAAGTTTCC 60.822 55.000 0.73 0.63 44.05 3.13
96 103 0.537371 CAAGCACCCGGAAGTTTCCT 60.537 55.000 0.73 0.00 45.33 3.36
97 104 0.185175 AAGCACCCGGAAGTTTCCTT 59.815 50.000 0.73 0.00 45.33 3.36
98 105 0.185175 AGCACCCGGAAGTTTCCTTT 59.815 50.000 0.73 0.00 45.33 3.11
99 106 0.313987 GCACCCGGAAGTTTCCTTTG 59.686 55.000 0.73 4.62 45.33 2.77
100 107 0.958822 CACCCGGAAGTTTCCTTTGG 59.041 55.000 0.73 8.79 45.33 3.28
101 108 0.554305 ACCCGGAAGTTTCCTTTGGT 59.446 50.000 0.73 9.33 45.33 3.67
129 139 1.541889 CGTCCACATCCATCCATCCAG 60.542 57.143 0.00 0.00 0.00 3.86
430 465 1.520666 CTCCGGCCGTCCAAGTATT 59.479 57.895 26.12 0.00 0.00 1.89
435 470 0.390735 GGCCGTCCAAGTATTGTCGT 60.391 55.000 0.00 0.00 46.99 4.34
518 556 2.265367 GGGAACAATTGGGGGTTCAAT 58.735 47.619 10.83 0.00 43.96 2.57
582 631 3.575256 TGGATTGATTGTGCTCTTTGCTT 59.425 39.130 0.00 0.00 43.37 3.91
641 691 1.667724 GACGCGAGCCTTGTAGTAGTA 59.332 52.381 15.93 0.00 0.00 1.82
642 692 1.669779 ACGCGAGCCTTGTAGTAGTAG 59.330 52.381 15.93 0.00 0.00 2.57
643 693 1.669779 CGCGAGCCTTGTAGTAGTAGT 59.330 52.381 0.00 0.00 0.00 2.73
644 694 2.868583 CGCGAGCCTTGTAGTAGTAGTA 59.131 50.000 0.00 0.00 0.00 1.82
645 695 3.059733 CGCGAGCCTTGTAGTAGTAGTAG 60.060 52.174 0.00 0.00 0.00 2.57
646 696 3.876320 GCGAGCCTTGTAGTAGTAGTAGT 59.124 47.826 0.00 0.00 0.00 2.73
767 846 4.761739 TCAGTGGCCATAAACAGAAAGAAG 59.238 41.667 9.72 0.00 0.00 2.85
909 991 3.004419 CGGAGAAGATATCGGTGTGCTTA 59.996 47.826 0.00 0.00 0.00 3.09
910 992 4.321304 CGGAGAAGATATCGGTGTGCTTAT 60.321 45.833 0.00 0.00 0.00 1.73
953 1035 2.354821 GTCTTGAGTGCCGTGTCTTTTT 59.645 45.455 0.00 0.00 0.00 1.94
954 1036 2.354510 TCTTGAGTGCCGTGTCTTTTTG 59.645 45.455 0.00 0.00 0.00 2.44
969 1051 2.248280 TTTTGCCGAGCTTGACACTA 57.752 45.000 1.22 0.00 0.00 2.74
1033 1115 1.355971 CGACGGTGTTTCAGGTATGG 58.644 55.000 0.00 0.00 0.00 2.74
1051 1134 6.948309 AGGTATGGTTCTGTCTTAAAAAGCAT 59.052 34.615 0.00 0.00 41.29 3.79
1054 1137 3.914364 GGTTCTGTCTTAAAAAGCATGCG 59.086 43.478 13.01 0.00 0.00 4.73
1119 1203 2.901249 CGGGATACGTCATTTTCCAGT 58.099 47.619 0.00 0.00 37.93 4.00
1142 1226 1.046472 AGCCATTCGGGGATACGTCA 61.046 55.000 0.00 0.00 37.04 4.35
1187 1271 5.489792 ACATGCCCTGTAATATAGAGTGG 57.510 43.478 0.00 0.00 35.91 4.00
1239 1334 3.571401 CAGAATACTGCCCCATTTCCATC 59.429 47.826 0.00 0.00 37.33 3.51
1267 1364 1.946768 TCCTTTTCAAGTGCTCAACGG 59.053 47.619 0.00 0.00 0.00 4.44
1361 1462 8.994500 TCTATTAGAGAGTAGAGACTGGAGAAA 58.006 37.037 0.00 0.00 35.45 2.52
1413 1514 0.179045 CCCTCACCCATGGACGATTC 60.179 60.000 15.22 0.00 0.00 2.52
1536 1637 1.987855 AAGCAGCAATGGCATGGCT 60.988 52.632 23.70 23.70 43.10 4.75
1596 1729 5.495926 AATCAAGCAAAGAGAGGAAGAGA 57.504 39.130 0.00 0.00 0.00 3.10
1685 1832 4.113815 CGAATCCAGGGGGCAGCA 62.114 66.667 0.00 0.00 0.00 4.41
1784 1931 4.652421 TGTATAGGTCCGAGGCTGTTATTT 59.348 41.667 0.00 0.00 0.00 1.40
1793 1940 0.824109 GGCTGTTATTTGGCTTCCCC 59.176 55.000 0.00 0.00 0.00 4.81
1832 1979 4.320567 CCATACGTATCCTAGCTGTGTCTG 60.321 50.000 4.74 0.00 0.00 3.51
1910 2061 2.796651 GTGTCCGGTCGTATCGCT 59.203 61.111 0.00 0.00 0.00 4.93
1940 2092 1.396996 CGAATTAGACGGCAGTTTGGG 59.603 52.381 0.00 0.00 0.00 4.12
2014 2166 5.458041 TTTTGAACCGTAGCAGTAGTAGT 57.542 39.130 0.00 0.00 0.00 2.73
2022 2174 4.213059 CCGTAGCAGTAGTAGTTACTAGGC 59.787 50.000 11.89 11.89 40.68 3.93
2102 2254 4.272489 CTCATGGAATTGGAGCTTTGGTA 58.728 43.478 0.00 0.00 0.00 3.25
2219 2371 6.268617 AGCTGATAAGATTACTGGACATGCTA 59.731 38.462 0.00 0.00 0.00 3.49
2318 2472 9.547753 GTTGACATGTTGATAATATCTACACCT 57.452 33.333 17.12 7.48 45.11 4.00
2675 2832 4.906618 AGCCCTCGTTTAAAGAAAGATCA 58.093 39.130 0.00 0.00 0.00 2.92
2699 2856 8.964476 CAAGGATTGGTCATAGTATTAGTTGT 57.036 34.615 0.00 0.00 43.94 3.32
2761 2918 1.695242 TGGGTTGGTCGTTCAGTATGT 59.305 47.619 0.00 0.00 37.40 2.29
2809 2966 5.819379 CCGCATTATATTGATAGGCATCAGT 59.181 40.000 0.00 0.00 42.11 3.41
2957 3119 1.597937 GGCAAGTTCAGTTGACAAGCG 60.598 52.381 0.00 0.00 35.30 4.68
3041 3203 6.202762 TCTCTTGCGTATATAAATTGCCACAG 59.797 38.462 0.00 0.00 0.00 3.66
3373 3535 8.818141 TCGTTGAGGTGATATATGAGATTTTC 57.182 34.615 0.00 0.00 0.00 2.29
3399 3561 6.267496 TCCTTTTAAGGCAGACTATTTTGC 57.733 37.500 3.56 0.00 46.06 3.68
3439 3601 6.494842 ACGTGCAATGTTGATTATATCCAAC 58.505 36.000 9.54 9.54 42.04 3.77
3448 3610 8.862325 TGTTGATTATATCCAACAGTTTGTCT 57.138 30.769 13.30 0.00 45.13 3.41
3449 3611 9.952030 TGTTGATTATATCCAACAGTTTGTCTA 57.048 29.630 13.30 0.00 45.13 2.59
3456 3618 8.862325 ATATCCAACAGTTTGTCTAATTCACA 57.138 30.769 0.00 0.00 0.00 3.58
3457 3619 7.765695 ATCCAACAGTTTGTCTAATTCACAT 57.234 32.000 0.00 0.00 0.00 3.21
3458 3620 7.202016 TCCAACAGTTTGTCTAATTCACATC 57.798 36.000 0.00 0.00 0.00 3.06
3459 3621 6.998074 TCCAACAGTTTGTCTAATTCACATCT 59.002 34.615 0.00 0.00 0.00 2.90
3460 3622 8.154203 TCCAACAGTTTGTCTAATTCACATCTA 58.846 33.333 0.00 0.00 0.00 1.98
3461 3623 8.446273 CCAACAGTTTGTCTAATTCACATCTAG 58.554 37.037 0.00 0.00 0.00 2.43
3462 3624 9.208022 CAACAGTTTGTCTAATTCACATCTAGA 57.792 33.333 0.00 0.00 0.00 2.43
3463 3625 9.950496 AACAGTTTGTCTAATTCACATCTAGAT 57.050 29.630 0.00 0.00 0.00 1.98
3464 3626 9.376075 ACAGTTTGTCTAATTCACATCTAGATG 57.624 33.333 27.63 27.63 44.15 2.90
3492 3654 7.849804 TTTAAGAATGTCACATCTAAGCTCC 57.150 36.000 0.00 0.00 0.00 4.70
3493 3655 4.414337 AGAATGTCACATCTAAGCTCCC 57.586 45.455 0.00 0.00 0.00 4.30
3494 3656 3.776969 AGAATGTCACATCTAAGCTCCCA 59.223 43.478 0.00 0.00 0.00 4.37
3495 3657 3.550437 ATGTCACATCTAAGCTCCCAC 57.450 47.619 0.00 0.00 0.00 4.61
3496 3658 2.256306 TGTCACATCTAAGCTCCCACA 58.744 47.619 0.00 0.00 0.00 4.17
3497 3659 2.637382 TGTCACATCTAAGCTCCCACAA 59.363 45.455 0.00 0.00 0.00 3.33
3498 3660 3.072330 TGTCACATCTAAGCTCCCACAAA 59.928 43.478 0.00 0.00 0.00 2.83
3499 3661 4.263462 TGTCACATCTAAGCTCCCACAAAT 60.263 41.667 0.00 0.00 0.00 2.32
3500 3662 5.045942 TGTCACATCTAAGCTCCCACAAATA 60.046 40.000 0.00 0.00 0.00 1.40
3501 3663 6.058183 GTCACATCTAAGCTCCCACAAATAT 58.942 40.000 0.00 0.00 0.00 1.28
3502 3664 7.147567 TGTCACATCTAAGCTCCCACAAATATA 60.148 37.037 0.00 0.00 0.00 0.86
3503 3665 7.880195 GTCACATCTAAGCTCCCACAAATATAT 59.120 37.037 0.00 0.00 0.00 0.86
3504 3666 9.100197 TCACATCTAAGCTCCCACAAATATATA 57.900 33.333 0.00 0.00 0.00 0.86
3505 3667 9.725019 CACATCTAAGCTCCCACAAATATATAA 57.275 33.333 0.00 0.00 0.00 0.98
3508 3670 8.792830 TCTAAGCTCCCACAAATATATAATGC 57.207 34.615 0.00 0.00 0.00 3.56
3509 3671 8.382405 TCTAAGCTCCCACAAATATATAATGCA 58.618 33.333 0.00 0.00 0.00 3.96
3510 3672 7.458409 AAGCTCCCACAAATATATAATGCAG 57.542 36.000 0.00 0.00 0.00 4.41
3511 3673 5.416952 AGCTCCCACAAATATATAATGCAGC 59.583 40.000 0.00 0.00 0.00 5.25
3512 3674 5.183713 GCTCCCACAAATATATAATGCAGCA 59.816 40.000 0.00 0.00 0.00 4.41
3513 3675 6.294675 GCTCCCACAAATATATAATGCAGCAA 60.295 38.462 0.00 0.00 0.00 3.91
3514 3676 6.980593 TCCCACAAATATATAATGCAGCAAC 58.019 36.000 0.00 0.00 0.00 4.17
3515 3677 6.548993 TCCCACAAATATATAATGCAGCAACA 59.451 34.615 0.00 0.00 0.00 3.33
3516 3678 7.069208 TCCCACAAATATATAATGCAGCAACAA 59.931 33.333 0.00 0.00 0.00 2.83
3517 3679 7.383029 CCCACAAATATATAATGCAGCAACAAG 59.617 37.037 0.00 0.00 0.00 3.16
3518 3680 8.136800 CCACAAATATATAATGCAGCAACAAGA 58.863 33.333 0.00 0.00 0.00 3.02
3519 3681 9.518906 CACAAATATATAATGCAGCAACAAGAA 57.481 29.630 0.00 0.00 0.00 2.52
3522 3684 9.533253 AAATATATAATGCAGCAACAAGAAACC 57.467 29.630 0.00 0.00 0.00 3.27
3523 3685 4.870123 ATAATGCAGCAACAAGAAACCA 57.130 36.364 0.00 0.00 0.00 3.67
3524 3686 3.540314 AATGCAGCAACAAGAAACCAA 57.460 38.095 0.00 0.00 0.00 3.67
3525 3687 3.540314 ATGCAGCAACAAGAAACCAAA 57.460 38.095 0.00 0.00 0.00 3.28
3526 3688 3.325293 TGCAGCAACAAGAAACCAAAA 57.675 38.095 0.00 0.00 0.00 2.44
3527 3689 3.668447 TGCAGCAACAAGAAACCAAAAA 58.332 36.364 0.00 0.00 0.00 1.94
3573 3735 3.893720 CACAAACAGAGTGGAAATCAGC 58.106 45.455 0.00 0.00 30.01 4.26
3574 3736 3.567164 CACAAACAGAGTGGAAATCAGCT 59.433 43.478 0.00 0.00 30.01 4.24
3575 3737 4.037208 CACAAACAGAGTGGAAATCAGCTT 59.963 41.667 0.00 0.00 30.01 3.74
3576 3738 5.239306 CACAAACAGAGTGGAAATCAGCTTA 59.761 40.000 0.00 0.00 30.01 3.09
3577 3739 5.471456 ACAAACAGAGTGGAAATCAGCTTAG 59.529 40.000 0.00 0.00 30.01 2.18
3578 3740 5.489792 AACAGAGTGGAAATCAGCTTAGA 57.510 39.130 0.00 0.00 30.01 2.10
3579 3741 5.690464 ACAGAGTGGAAATCAGCTTAGAT 57.310 39.130 0.00 0.00 30.01 1.98
3580 3742 5.426504 ACAGAGTGGAAATCAGCTTAGATG 58.573 41.667 0.00 0.00 30.01 2.90
3581 3743 5.046014 ACAGAGTGGAAATCAGCTTAGATGT 60.046 40.000 0.00 0.00 30.01 3.06
3582 3744 5.293814 CAGAGTGGAAATCAGCTTAGATGTG 59.706 44.000 0.00 0.00 30.01 3.21
3583 3745 5.188555 AGAGTGGAAATCAGCTTAGATGTGA 59.811 40.000 0.00 0.00 30.01 3.58
3584 3746 5.181748 AGTGGAAATCAGCTTAGATGTGAC 58.818 41.667 0.00 0.00 0.00 3.67
3585 3747 4.937620 GTGGAAATCAGCTTAGATGTGACA 59.062 41.667 0.00 0.00 0.00 3.58
3586 3748 5.587844 GTGGAAATCAGCTTAGATGTGACAT 59.412 40.000 0.00 0.00 0.00 3.06
3587 3749 6.763135 GTGGAAATCAGCTTAGATGTGACATA 59.237 38.462 0.00 0.00 0.00 2.29
3588 3750 6.988580 TGGAAATCAGCTTAGATGTGACATAG 59.011 38.462 0.00 0.00 0.00 2.23
3589 3751 6.989169 GGAAATCAGCTTAGATGTGACATAGT 59.011 38.462 0.00 0.00 0.00 2.12
3590 3752 7.497249 GGAAATCAGCTTAGATGTGACATAGTT 59.503 37.037 0.00 0.00 0.00 2.24
3591 3753 9.534565 GAAATCAGCTTAGATGTGACATAGTTA 57.465 33.333 0.00 0.00 0.00 2.24
3593 3755 9.486497 AATCAGCTTAGATGTGACATAGTTATG 57.514 33.333 0.00 0.00 39.55 1.90
3620 3782 6.312399 CATCTAGATGTGTCCTAGACAGAC 57.688 45.833 22.42 0.00 43.57 3.51
3621 3783 4.783055 TCTAGATGTGTCCTAGACAGACC 58.217 47.826 0.00 0.00 43.57 3.85
3622 3784 2.741145 AGATGTGTCCTAGACAGACCC 58.259 52.381 0.00 0.00 43.57 4.46
3623 3785 2.313342 AGATGTGTCCTAGACAGACCCT 59.687 50.000 0.00 0.00 43.57 4.34
3624 3786 3.528078 AGATGTGTCCTAGACAGACCCTA 59.472 47.826 0.00 0.00 43.57 3.53
3625 3787 4.169068 AGATGTGTCCTAGACAGACCCTAT 59.831 45.833 0.00 0.00 43.57 2.57
3626 3788 5.372959 AGATGTGTCCTAGACAGACCCTATA 59.627 44.000 0.00 0.00 43.57 1.31
3627 3789 5.664815 TGTGTCCTAGACAGACCCTATAT 57.335 43.478 0.00 0.00 43.57 0.86
3628 3790 5.632118 TGTGTCCTAGACAGACCCTATATC 58.368 45.833 0.00 0.00 43.57 1.63
3629 3791 5.011586 GTGTCCTAGACAGACCCTATATCC 58.988 50.000 0.00 0.00 43.57 2.59
3630 3792 4.668335 TGTCCTAGACAGACCCTATATCCA 59.332 45.833 0.00 0.00 37.67 3.41
3631 3793 5.135533 TGTCCTAGACAGACCCTATATCCAA 59.864 44.000 0.00 0.00 37.67 3.53
4008 4191 4.799564 TGTTGGCTAATCCCACATTTTC 57.200 40.909 0.00 0.00 35.75 2.29
4097 4280 2.640184 GTGGACAACCTATGGTAAGCC 58.360 52.381 0.00 0.00 33.12 4.35
4212 4395 3.740115 GTCCTGGTTCTTAGCAAGTGAA 58.260 45.455 0.00 0.00 0.00 3.18
4305 4488 2.221169 TGGTGTGTTCTTCAGATGCAC 58.779 47.619 0.00 5.54 33.73 4.57
4380 4563 3.664107 TGAAGAGCCTGTGTATGTGAAC 58.336 45.455 0.00 0.00 0.00 3.18
4480 4663 4.147219 CGCAAGGTAAATGCCTATAAGC 57.853 45.455 0.00 0.00 40.72 3.09
4586 4770 2.485426 CACAAGTGCACAACAGATAGGG 59.515 50.000 21.04 0.00 0.00 3.53
4587 4771 1.470098 CAAGTGCACAACAGATAGGGC 59.530 52.381 21.04 0.00 0.00 5.19
4588 4772 0.692476 AGTGCACAACAGATAGGGCA 59.308 50.000 21.04 0.00 0.00 5.36
4633 4817 4.450305 TCTACATACCCTACCTCCACTC 57.550 50.000 0.00 0.00 0.00 3.51
4659 4843 1.588674 TCGATCTGCACCACGTTTTT 58.411 45.000 0.00 0.00 0.00 1.94
4660 4844 2.756829 TCGATCTGCACCACGTTTTTA 58.243 42.857 0.00 0.00 0.00 1.52
4661 4845 2.477375 TCGATCTGCACCACGTTTTTAC 59.523 45.455 0.00 0.00 0.00 2.01
4662 4846 2.478894 CGATCTGCACCACGTTTTTACT 59.521 45.455 0.00 0.00 0.00 2.24
4663 4847 3.676172 CGATCTGCACCACGTTTTTACTA 59.324 43.478 0.00 0.00 0.00 1.82
4664 4848 4.328983 CGATCTGCACCACGTTTTTACTAT 59.671 41.667 0.00 0.00 0.00 2.12
4665 4849 5.500290 CGATCTGCACCACGTTTTTACTATC 60.500 44.000 0.00 0.00 0.00 2.08
4666 4850 3.676172 TCTGCACCACGTTTTTACTATCG 59.324 43.478 0.00 0.00 0.00 2.92
4677 4863 5.003778 CGTTTTTACTATCGTAGGGTGAACG 59.996 44.000 0.00 0.00 41.64 3.95
4729 4915 6.494893 TTCAATACACCAAGTTATCAGTGC 57.505 37.500 0.00 0.00 33.46 4.40
4744 4930 8.190784 AGTTATCAGTGCCAACATAAAAATAGC 58.809 33.333 8.72 0.00 0.00 2.97
4764 4950 5.198602 AGCAAGGATTTGGGAATAGAAGT 57.801 39.130 0.00 0.00 34.79 3.01
4765 4951 5.196695 AGCAAGGATTTGGGAATAGAAGTC 58.803 41.667 0.00 0.00 34.79 3.01
4768 4954 4.786425 AGGATTTGGGAATAGAAGTCAGC 58.214 43.478 0.00 0.00 0.00 4.26
4777 4963 4.142049 GGAATAGAAGTCAGCTGCTACACT 60.142 45.833 9.47 4.16 35.76 3.55
4790 4976 5.997746 AGCTGCTACACTTTGACAATTTCTA 59.002 36.000 0.00 0.00 0.00 2.10
4804 4990 8.169977 TGACAATTTCTAATATGGATGAAGGC 57.830 34.615 0.00 0.00 0.00 4.35
4805 4991 7.779326 TGACAATTTCTAATATGGATGAAGGCA 59.221 33.333 0.00 0.00 0.00 4.75
4812 4998 7.520798 TCTAATATGGATGAAGGCAGATTTGT 58.479 34.615 0.00 0.00 0.00 2.83
4818 5004 1.888512 TGAAGGCAGATTTGTGCTTCC 59.111 47.619 0.00 0.00 43.45 3.46
4833 5019 2.158475 TGCTTCCTTTGTTCATCTGGGT 60.158 45.455 0.00 0.00 0.00 4.51
4838 5024 6.442541 TTCCTTTGTTCATCTGGGTAGTTA 57.557 37.500 0.00 0.00 0.00 2.24
4850 5036 2.764572 TGGGTAGTTACTAAGCTGGAGC 59.235 50.000 0.00 0.00 42.49 4.70
4868 5054 6.363577 TGGAGCGAATTGAATTCATTAGTC 57.636 37.500 17.14 3.26 39.22 2.59
4889 5075 3.815962 TCGCAATGTAGTAAAAGGCAACA 59.184 39.130 0.00 0.00 41.41 3.33
4905 5091 9.949174 AAAAGGCAACACATAAATTTCAATTTC 57.051 25.926 0.00 0.00 38.26 2.17
4906 5092 7.350110 AGGCAACACATAAATTTCAATTTCG 57.650 32.000 0.00 0.00 38.26 3.46
4907 5093 6.928492 AGGCAACACATAAATTTCAATTTCGT 59.072 30.769 0.00 0.00 38.26 3.85
4908 5094 7.008859 GGCAACACATAAATTTCAATTTCGTG 58.991 34.615 17.70 17.70 42.11 4.35
4909 5095 7.008859 GCAACACATAAATTTCAATTTCGTGG 58.991 34.615 20.67 11.72 41.45 4.94
4911 5097 9.186323 CAACACATAAATTTCAATTTCGTGGTA 57.814 29.630 20.67 1.15 41.45 3.25
4912 5098 8.736751 ACACATAAATTTCAATTTCGTGGTAC 57.263 30.769 20.67 0.00 41.45 3.34
4913 5099 8.573035 ACACATAAATTTCAATTTCGTGGTACT 58.427 29.630 20.67 7.11 41.45 2.73
4914 5100 9.405587 CACATAAATTTCAATTTCGTGGTACTT 57.594 29.630 14.28 0.00 39.24 2.24
4915 5101 9.405587 ACATAAATTTCAATTTCGTGGTACTTG 57.594 29.630 0.00 0.00 39.24 3.16
4916 5102 9.619316 CATAAATTTCAATTTCGTGGTACTTGA 57.381 29.630 0.00 0.00 39.24 3.02
4920 5106 6.627395 TTCAATTTCGTGGTACTTGAATGT 57.373 33.333 0.00 0.00 32.52 2.71
4921 5107 6.236017 TCAATTTCGTGGTACTTGAATGTC 57.764 37.500 0.00 0.00 0.00 3.06
4922 5108 5.995282 TCAATTTCGTGGTACTTGAATGTCT 59.005 36.000 0.00 0.00 0.00 3.41
4923 5109 5.862924 ATTTCGTGGTACTTGAATGTCTG 57.137 39.130 0.00 0.00 0.00 3.51
4924 5110 4.594123 TTCGTGGTACTTGAATGTCTGA 57.406 40.909 0.00 0.00 0.00 3.27
4925 5111 4.174411 TCGTGGTACTTGAATGTCTGAG 57.826 45.455 0.00 0.00 0.00 3.35
4937 5227 7.337942 ACTTGAATGTCTGAGTTCTCAGTTTTT 59.662 33.333 23.46 16.48 38.75 1.94
4948 5238 5.753921 AGTTCTCAGTTTTTAACCTCGACAG 59.246 40.000 0.00 0.00 0.00 3.51
4991 5281 4.397420 TCTGCAAAAGCTCATTTAGGACA 58.603 39.130 0.00 0.00 0.00 4.02
5014 5307 7.204604 ACATGCATGAACCATATACAATGTTG 58.795 34.615 32.75 1.05 0.00 3.33
5032 5325 1.336131 TGCCAGTGCCAATTTGCTTA 58.664 45.000 2.90 0.00 36.33 3.09
5035 5328 2.927871 GCCAGTGCCAATTTGCTTACAG 60.928 50.000 2.90 0.00 0.00 2.74
5062 5355 1.595311 TCTTGGGTAGCATGTGGGAT 58.405 50.000 0.00 0.00 0.00 3.85
5078 5371 7.663827 CATGTGGGATGATTATGCTAATGTTT 58.336 34.615 0.00 0.00 0.00 2.83
5105 5399 6.042143 TCTTTGATTGTCAAGGTTTTGCTTC 58.958 36.000 2.43 0.00 37.70 3.86
5106 5400 3.963665 TGATTGTCAAGGTTTTGCTTCG 58.036 40.909 0.00 0.00 34.21 3.79
5108 5402 3.859411 TTGTCAAGGTTTTGCTTCGTT 57.141 38.095 0.00 0.00 34.21 3.85
5111 5405 2.851824 GTCAAGGTTTTGCTTCGTTGTG 59.148 45.455 0.00 0.00 34.21 3.33
5115 5409 1.404035 GGTTTTGCTTCGTTGTGTCCT 59.596 47.619 0.00 0.00 0.00 3.85
5126 5420 4.556233 TCGTTGTGTCCTCTTTCTGTATG 58.444 43.478 0.00 0.00 0.00 2.39
5131 5425 5.680619 TGTGTCCTCTTTCTGTATGTTGTT 58.319 37.500 0.00 0.00 0.00 2.83
5133 5427 7.276658 TGTGTCCTCTTTCTGTATGTTGTTAA 58.723 34.615 0.00 0.00 0.00 2.01
5134 5428 7.225931 TGTGTCCTCTTTCTGTATGTTGTTAAC 59.774 37.037 0.00 0.00 0.00 2.01
5137 5433 8.617809 GTCCTCTTTCTGTATGTTGTTAACAAA 58.382 33.333 22.14 12.91 45.86 2.83
5153 5449 6.478344 TGTTAACAAAAATTGACATGTGCCTC 59.522 34.615 1.15 0.00 0.00 4.70
5175 5471 2.042686 TTGTGCAGCCATATCTCCAC 57.957 50.000 0.00 0.00 0.00 4.02
5217 5513 2.866015 AAAAGGGCCAGGGGAGCT 60.866 61.111 6.18 0.00 0.00 4.09
5340 5636 1.002857 CCTCCCAATCTCCCAAAGGT 58.997 55.000 0.00 0.00 0.00 3.50
5349 5645 1.214175 TCTCCCAAAGGTGCAACTTCA 59.786 47.619 19.26 1.28 36.74 3.02
5382 5678 3.722728 GGAAACCATGAATGAGATGGC 57.277 47.619 0.00 0.00 43.82 4.40
5383 5679 3.294214 GGAAACCATGAATGAGATGGCT 58.706 45.455 0.00 0.00 43.82 4.75
5384 5680 4.464008 GGAAACCATGAATGAGATGGCTA 58.536 43.478 0.00 0.00 43.82 3.93
5385 5681 4.518211 GGAAACCATGAATGAGATGGCTAG 59.482 45.833 0.00 0.00 43.82 3.42
5387 5683 5.378230 AACCATGAATGAGATGGCTAGAA 57.622 39.130 0.00 0.00 43.82 2.10
5463 5759 1.067669 TGAGCAAGATAGAATCGCGCT 59.932 47.619 5.56 0.00 41.98 5.92
5467 5763 0.104855 AAGATAGAATCGCGCTGGCA 59.895 50.000 5.56 0.00 39.92 4.92
5512 5808 6.035650 GCTCTGCTCTATAGTAGTGATAGACG 59.964 46.154 0.00 0.00 36.84 4.18
5520 5816 8.187480 TCTATAGTAGTGATAGACGTATCGACC 58.813 40.741 0.00 0.00 38.37 4.79
5522 5818 2.831333 AGTGATAGACGTATCGACCGT 58.169 47.619 11.32 11.32 38.37 4.83
5588 5884 9.856488 GTTTCTACATTCTGTACAATGAGTAGA 57.144 33.333 13.29 15.55 37.24 2.59
5613 5914 2.656560 TTGTGGTTTTTGTGTTCCGG 57.343 45.000 0.00 0.00 0.00 5.14
5616 5917 0.324460 TGGTTTTTGTGTTCCGGGGT 60.324 50.000 0.00 0.00 0.00 4.95
5620 5921 3.069872 GGTTTTTGTGTTCCGGGGTTTAT 59.930 43.478 0.00 0.00 0.00 1.40
5623 5924 1.364269 TGTGTTCCGGGGTTTATCCT 58.636 50.000 0.00 0.00 36.25 3.24
5650 5951 1.002087 CGGTCAGGAGGCTTTTGTAGT 59.998 52.381 0.00 0.00 0.00 2.73
5651 5952 2.427506 GGTCAGGAGGCTTTTGTAGTG 58.572 52.381 0.00 0.00 0.00 2.74
5652 5953 2.427506 GTCAGGAGGCTTTTGTAGTGG 58.572 52.381 0.00 0.00 0.00 4.00
5658 5959 3.378427 GGAGGCTTTTGTAGTGGCTTATG 59.622 47.826 0.00 0.00 36.73 1.90
5712 6015 3.248024 TGGTGTGGATTGGTCTCTTAGT 58.752 45.455 0.00 0.00 0.00 2.24
5778 6084 3.131709 ACATAATAGCTTCGCCTGCAT 57.868 42.857 0.00 0.00 0.00 3.96
5865 6171 1.227380 GCATGATTCGGAGCCTCGT 60.227 57.895 0.00 0.00 0.00 4.18
5897 6205 9.096160 GATGTTTGCATCTCTCTGGTATATATG 57.904 37.037 0.00 0.00 45.97 1.78
5944 6252 2.101415 TGATTATCAGAGTGGACTGCCG 59.899 50.000 0.00 0.00 37.75 5.69
5992 6301 2.701107 GGTCAGTCAGGCCTTAAGAAC 58.299 52.381 0.00 0.00 39.61 3.01
5995 6304 4.496360 GTCAGTCAGGCCTTAAGAACTAC 58.504 47.826 0.00 0.00 0.00 2.73
5997 6306 4.463186 TCAGTCAGGCCTTAAGAACTACTC 59.537 45.833 0.00 0.00 0.00 2.59
5998 6307 3.770388 AGTCAGGCCTTAAGAACTACTCC 59.230 47.826 0.00 0.00 0.00 3.85
6000 6309 3.108376 CAGGCCTTAAGAACTACTCCCT 58.892 50.000 0.00 0.00 0.00 4.20
6001 6310 3.133183 CAGGCCTTAAGAACTACTCCCTC 59.867 52.174 0.00 0.00 0.00 4.30
6004 6313 3.712218 GCCTTAAGAACTACTCCCTCCAT 59.288 47.826 3.36 0.00 0.00 3.41
6006 6315 5.685337 GCCTTAAGAACTACTCCCTCCATTC 60.685 48.000 3.36 0.00 0.00 2.67
6007 6316 5.163290 CCTTAAGAACTACTCCCTCCATTCC 60.163 48.000 3.36 0.00 0.00 3.01
6008 6317 3.491766 AGAACTACTCCCTCCATTCCA 57.508 47.619 0.00 0.00 0.00 3.53
6009 6318 3.803340 AGAACTACTCCCTCCATTCCAA 58.197 45.455 0.00 0.00 0.00 3.53
6013 6322 6.447084 AGAACTACTCCCTCCATTCCAAAATA 59.553 38.462 0.00 0.00 0.00 1.40
6014 6323 6.253946 ACTACTCCCTCCATTCCAAAATAG 57.746 41.667 0.00 0.00 0.00 1.73
6015 6324 5.970640 ACTACTCCCTCCATTCCAAAATAGA 59.029 40.000 0.00 0.00 0.00 1.98
6016 6325 6.621514 ACTACTCCCTCCATTCCAAAATAGAT 59.378 38.462 0.00 0.00 0.00 1.98
6017 6326 5.699143 ACTCCCTCCATTCCAAAATAGATG 58.301 41.667 0.00 0.00 0.00 2.90
6018 6327 5.433051 ACTCCCTCCATTCCAAAATAGATGA 59.567 40.000 0.00 0.00 0.00 2.92
6019 6328 5.694995 TCCCTCCATTCCAAAATAGATGAC 58.305 41.667 0.00 0.00 0.00 3.06
6020 6329 5.433051 TCCCTCCATTCCAAAATAGATGACT 59.567 40.000 0.00 0.00 0.00 3.41
6022 6331 6.359804 CCTCCATTCCAAAATAGATGACTCA 58.640 40.000 0.00 0.00 0.00 3.41
6023 6332 6.830324 CCTCCATTCCAAAATAGATGACTCAA 59.170 38.462 0.00 0.00 0.00 3.02
6024 6333 7.340232 CCTCCATTCCAAAATAGATGACTCAAA 59.660 37.037 0.00 0.00 0.00 2.69
6026 6335 9.919416 TCCATTCCAAAATAGATGACTCAAATA 57.081 29.630 0.00 0.00 0.00 1.40
6030 6339 9.973661 TTCCAAAATAGATGACTCAAATAAGGA 57.026 29.630 0.00 0.00 0.00 3.36
6031 6340 9.618890 TCCAAAATAGATGACTCAAATAAGGAG 57.381 33.333 0.00 0.00 38.36 3.69
6033 6342 8.896744 CAAAATAGATGACTCAAATAAGGAGCA 58.103 33.333 0.00 0.00 35.79 4.26
6034 6343 9.638176 AAAATAGATGACTCAAATAAGGAGCAT 57.362 29.630 0.00 0.00 35.79 3.79
6036 6345 9.941325 AATAGATGACTCAAATAAGGAGCATAG 57.059 33.333 0.00 0.00 35.79 2.23
6037 6346 7.372260 AGATGACTCAAATAAGGAGCATAGT 57.628 36.000 0.00 0.00 35.79 2.12
6039 6348 5.674525 TGACTCAAATAAGGAGCATAGTGG 58.325 41.667 0.00 0.00 35.79 4.00
6040 6349 5.425217 TGACTCAAATAAGGAGCATAGTGGA 59.575 40.000 0.00 0.00 35.79 4.02
6041 6350 6.100279 TGACTCAAATAAGGAGCATAGTGGAT 59.900 38.462 0.00 0.00 35.79 3.41
6042 6351 6.904626 ACTCAAATAAGGAGCATAGTGGATT 58.095 36.000 0.00 0.00 35.79 3.01
6043 6352 6.769822 ACTCAAATAAGGAGCATAGTGGATTG 59.230 38.462 0.00 0.00 35.79 2.67
6045 6354 2.355010 AAGGAGCATAGTGGATTGCC 57.645 50.000 0.00 0.00 39.72 4.52
6046 6355 1.516110 AGGAGCATAGTGGATTGCCT 58.484 50.000 0.00 0.00 39.72 4.75
6047 6356 1.419387 AGGAGCATAGTGGATTGCCTC 59.581 52.381 0.00 0.00 39.72 4.70
6048 6357 1.419387 GGAGCATAGTGGATTGCCTCT 59.581 52.381 0.00 0.00 39.72 3.69
6049 6358 2.492012 GAGCATAGTGGATTGCCTCTG 58.508 52.381 0.00 0.00 39.72 3.35
6050 6359 0.950116 GCATAGTGGATTGCCTCTGC 59.050 55.000 0.00 0.00 38.42 4.26
6051 6360 1.476471 GCATAGTGGATTGCCTCTGCT 60.476 52.381 0.00 0.00 38.42 4.24
6052 6361 2.492012 CATAGTGGATTGCCTCTGCTC 58.508 52.381 0.00 0.00 38.42 4.26
6053 6362 0.461548 TAGTGGATTGCCTCTGCTCG 59.538 55.000 0.00 0.00 38.42 5.03
6054 6363 1.817099 GTGGATTGCCTCTGCTCGG 60.817 63.158 0.00 0.00 38.71 4.63
6055 6364 1.989508 TGGATTGCCTCTGCTCGGA 60.990 57.895 0.00 0.00 38.71 4.55
6056 6365 1.227497 GGATTGCCTCTGCTCGGAG 60.227 63.158 0.00 0.00 38.71 4.63
6057 6366 1.519719 GATTGCCTCTGCTCGGAGT 59.480 57.895 6.90 0.00 38.71 3.85
6058 6367 0.529555 GATTGCCTCTGCTCGGAGTC 60.530 60.000 6.90 0.00 38.71 3.36
6059 6368 1.965754 ATTGCCTCTGCTCGGAGTCC 61.966 60.000 6.90 0.00 38.71 3.85
6060 6369 3.844090 GCCTCTGCTCGGAGTCCC 61.844 72.222 2.80 0.00 33.53 4.46
6061 6370 2.043450 CCTCTGCTCGGAGTCCCT 60.043 66.667 2.80 0.00 0.00 4.20
6062 6371 2.422231 CCTCTGCTCGGAGTCCCTG 61.422 68.421 2.80 0.00 0.00 4.45
6063 6372 1.680651 CTCTGCTCGGAGTCCCTGT 60.681 63.158 2.80 0.00 0.00 4.00
6064 6373 1.228894 TCTGCTCGGAGTCCCTGTT 60.229 57.895 2.80 0.00 0.00 3.16
6065 6374 1.216710 CTGCTCGGAGTCCCTGTTC 59.783 63.158 2.80 0.00 0.00 3.18
6066 6375 2.182030 GCTCGGAGTCCCTGTTCG 59.818 66.667 2.80 0.00 0.00 3.95
6067 6376 2.885861 CTCGGAGTCCCTGTTCGG 59.114 66.667 2.80 0.00 0.00 4.30
6068 6377 3.358076 CTCGGAGTCCCTGTTCGGC 62.358 68.421 2.80 0.00 0.00 5.54
6069 6378 4.452733 CGGAGTCCCTGTTCGGCC 62.453 72.222 2.80 0.00 0.00 6.13
6073 6382 3.003763 GTCCCTGTTCGGCCCTCT 61.004 66.667 0.00 0.00 0.00 3.69
6079 6388 4.821589 GTTCGGCCCTCTGCTCCG 62.822 72.222 0.00 0.00 44.16 4.63
6095 6404 1.987855 CCGGGAGCAGGTGGAGTTA 60.988 63.158 0.00 0.00 0.00 2.24
6097 6406 1.258445 CGGGAGCAGGTGGAGTTACT 61.258 60.000 0.00 0.00 0.00 2.24
6098 6407 0.537653 GGGAGCAGGTGGAGTTACTC 59.462 60.000 3.36 3.36 0.00 2.59
6100 6409 1.205893 GGAGCAGGTGGAGTTACTCTG 59.794 57.143 12.41 3.80 0.00 3.35
6102 6411 2.763448 GAGCAGGTGGAGTTACTCTGAT 59.237 50.000 12.41 0.99 0.00 2.90
6103 6412 2.763448 AGCAGGTGGAGTTACTCTGATC 59.237 50.000 12.41 0.06 0.00 2.92
6105 6414 3.370104 CAGGTGGAGTTACTCTGATCCT 58.630 50.000 12.41 11.15 32.79 3.24
6106 6415 3.772025 CAGGTGGAGTTACTCTGATCCTT 59.228 47.826 12.41 0.00 32.79 3.36
6107 6416 4.956700 CAGGTGGAGTTACTCTGATCCTTA 59.043 45.833 12.41 0.00 32.79 2.69
6108 6417 5.422331 CAGGTGGAGTTACTCTGATCCTTAA 59.578 44.000 12.41 0.00 32.79 1.85
6109 6418 6.023603 AGGTGGAGTTACTCTGATCCTTAAA 58.976 40.000 12.41 0.00 32.79 1.52
6110 6419 6.674419 AGGTGGAGTTACTCTGATCCTTAAAT 59.326 38.462 12.41 0.00 32.79 1.40
6111 6420 7.182930 AGGTGGAGTTACTCTGATCCTTAAATT 59.817 37.037 12.41 0.00 32.79 1.82
6112 6421 7.496263 GGTGGAGTTACTCTGATCCTTAAATTC 59.504 40.741 12.41 0.00 32.79 2.17
6116 6425 7.493367 AGTTACTCTGATCCTTAAATTCGAGG 58.507 38.462 1.52 1.52 0.00 4.63
6120 6429 4.061596 CTGATCCTTAAATTCGAGGGAGC 58.938 47.826 7.10 4.12 33.73 4.70
6121 6430 3.711704 TGATCCTTAAATTCGAGGGAGCT 59.288 43.478 7.83 0.00 34.11 4.09
6122 6431 4.899457 TGATCCTTAAATTCGAGGGAGCTA 59.101 41.667 7.83 0.00 34.11 3.32
6123 6432 4.667519 TCCTTAAATTCGAGGGAGCTAC 57.332 45.455 7.10 0.00 33.73 3.58
6124 6433 4.287552 TCCTTAAATTCGAGGGAGCTACT 58.712 43.478 0.00 0.00 33.73 2.57
6126 6435 2.990066 AAATTCGAGGGAGCTACTGG 57.010 50.000 0.00 0.00 0.00 4.00
6128 6437 2.390225 ATTCGAGGGAGCTACTGGAT 57.610 50.000 0.00 0.00 0.00 3.41
6130 6439 1.403814 TCGAGGGAGCTACTGGATTG 58.596 55.000 0.00 0.00 0.00 2.67
6132 6441 0.107643 GAGGGAGCTACTGGATTGCC 59.892 60.000 0.00 0.00 0.00 4.52
6133 6442 1.227674 GGGAGCTACTGGATTGCCG 60.228 63.158 0.00 0.00 36.79 5.69
6135 6444 0.178068 GGAGCTACTGGATTGCCGAA 59.822 55.000 0.00 0.00 36.79 4.30
6136 6445 1.291132 GAGCTACTGGATTGCCGAAC 58.709 55.000 0.00 0.00 36.79 3.95
6137 6446 0.460284 AGCTACTGGATTGCCGAACG 60.460 55.000 0.00 0.00 36.79 3.95
6138 6447 2.006772 CTACTGGATTGCCGAACGC 58.993 57.895 0.00 0.00 36.79 4.84
6139 6448 0.460284 CTACTGGATTGCCGAACGCT 60.460 55.000 0.00 0.00 38.78 5.07
6140 6449 0.459585 TACTGGATTGCCGAACGCTC 60.460 55.000 0.00 0.00 38.78 5.03
6141 6450 2.435938 TGGATTGCCGAACGCTCC 60.436 61.111 0.00 0.00 38.78 4.70
6142 6451 2.125106 GGATTGCCGAACGCTCCT 60.125 61.111 0.00 0.00 38.78 3.69
6158 6467 3.559384 CGCTCCTTACTTTCTTTTCCCCT 60.559 47.826 0.00 0.00 0.00 4.79
6160 6469 4.263550 GCTCCTTACTTTCTTTTCCCCTCT 60.264 45.833 0.00 0.00 0.00 3.69
6161 6470 5.492895 CTCCTTACTTTCTTTTCCCCTCTC 58.507 45.833 0.00 0.00 0.00 3.20
6320 6631 3.154827 ACTGTTGGGGTACATCCTTTG 57.845 47.619 0.00 0.00 36.25 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 36 1.143305 CAAACTGACACCTGCTCTCG 58.857 55.000 0.00 0.00 0.00 4.04
91 98 2.888414 GACGGATGGAAACCAAAGGAAA 59.112 45.455 0.00 0.00 36.95 3.13
92 99 2.510613 GACGGATGGAAACCAAAGGAA 58.489 47.619 0.00 0.00 36.95 3.36
93 100 1.271707 GGACGGATGGAAACCAAAGGA 60.272 52.381 0.00 0.00 36.95 3.36
94 101 1.173913 GGACGGATGGAAACCAAAGG 58.826 55.000 0.00 0.00 36.95 3.11
95 102 1.539827 GTGGACGGATGGAAACCAAAG 59.460 52.381 0.00 0.00 36.95 2.77
96 103 1.133761 TGTGGACGGATGGAAACCAAA 60.134 47.619 0.00 0.00 36.95 3.28
97 104 0.474614 TGTGGACGGATGGAAACCAA 59.525 50.000 0.00 0.00 36.95 3.67
98 105 0.695924 ATGTGGACGGATGGAAACCA 59.304 50.000 0.00 0.00 38.19 3.67
99 106 1.379527 GATGTGGACGGATGGAAACC 58.620 55.000 0.00 0.00 0.00 3.27
100 107 1.339631 TGGATGTGGACGGATGGAAAC 60.340 52.381 0.00 0.00 0.00 2.78
101 108 0.988063 TGGATGTGGACGGATGGAAA 59.012 50.000 0.00 0.00 0.00 3.13
129 139 4.676471 TGTTTTCGTATATGTATCGGCGAC 59.324 41.667 13.76 0.58 0.00 5.19
255 265 4.143333 GGCGCGCTTAGGTGGAGA 62.143 66.667 32.29 0.00 0.00 3.71
426 461 3.804325 CACAGATGATGGGACGACAATAC 59.196 47.826 0.00 0.00 32.10 1.89
430 465 1.204704 GACACAGATGATGGGACGACA 59.795 52.381 0.00 0.00 35.10 4.35
431 466 1.927895 GACACAGATGATGGGACGAC 58.072 55.000 0.00 0.00 35.10 4.34
435 470 1.141665 CGCGACACAGATGATGGGA 59.858 57.895 0.00 0.00 35.10 4.37
518 556 1.152830 GGGGCAAGGGTTCAGTCAA 59.847 57.895 0.00 0.00 0.00 3.18
582 631 1.089112 CATGACTGAATTCCGCAGCA 58.911 50.000 2.27 0.00 36.86 4.41
641 691 3.015327 CCACTACTGCGAAGGTACTACT 58.985 50.000 0.00 0.00 38.49 2.57
642 692 2.751806 ACCACTACTGCGAAGGTACTAC 59.248 50.000 0.00 0.00 38.49 2.73
643 693 3.077484 ACCACTACTGCGAAGGTACTA 57.923 47.619 0.00 0.00 38.49 1.82
645 695 2.738013 AACCACTACTGCGAAGGTAC 57.262 50.000 0.00 0.00 31.10 3.34
646 696 3.069872 TGAAAACCACTACTGCGAAGGTA 59.930 43.478 0.00 0.00 31.10 3.08
767 846 9.674068 TTTATTTATCCCCCACAAAATAAAAGC 57.326 29.630 8.57 0.00 39.22 3.51
909 991 1.417517 TCATTCCATGCCGCAGTAGAT 59.582 47.619 0.00 0.00 0.00 1.98
910 992 0.829990 TCATTCCATGCCGCAGTAGA 59.170 50.000 0.00 0.00 0.00 2.59
930 1012 1.115930 AGACACGGCACTCAAGACCT 61.116 55.000 0.00 0.00 0.00 3.85
939 1021 1.657181 CGGCAAAAAGACACGGCAC 60.657 57.895 0.00 0.00 0.00 5.01
941 1023 1.082104 CTCGGCAAAAAGACACGGC 60.082 57.895 0.00 0.00 0.00 5.68
953 1035 0.679505 AACTAGTGTCAAGCTCGGCA 59.320 50.000 0.00 0.00 0.00 5.69
954 1036 1.071605 CAACTAGTGTCAAGCTCGGC 58.928 55.000 0.00 0.00 0.00 5.54
1033 1115 4.537015 ACGCATGCTTTTTAAGACAGAAC 58.463 39.130 17.13 0.00 0.00 3.01
1051 1134 1.335810 GTGTCTCCATATCCGTACGCA 59.664 52.381 10.49 0.00 0.00 5.24
1054 1137 2.031333 GTCCGTGTCTCCATATCCGTAC 60.031 54.545 0.00 0.00 0.00 3.67
1118 1202 0.685097 TATCCCCGAATGGCTGCTAC 59.315 55.000 0.00 0.00 0.00 3.58
1119 1203 0.685097 GTATCCCCGAATGGCTGCTA 59.315 55.000 0.00 0.00 0.00 3.49
1159 1243 9.338622 ACTCTATATTACAGGGCATGTTTTAAC 57.661 33.333 11.12 0.00 39.96 2.01
1195 1290 3.481559 TCTCATCTCTGTTTCTCCCCT 57.518 47.619 0.00 0.00 0.00 4.79
1196 1291 3.708631 TGATCTCATCTCTGTTTCTCCCC 59.291 47.826 0.00 0.00 0.00 4.81
1197 1292 4.648762 TCTGATCTCATCTCTGTTTCTCCC 59.351 45.833 0.00 0.00 0.00 4.30
1198 1293 5.850557 TCTGATCTCATCTCTGTTTCTCC 57.149 43.478 0.00 0.00 0.00 3.71
1267 1364 6.652900 GGGTCTAGAGGATCAATTAATTCAGC 59.347 42.308 0.00 0.00 37.82 4.26
1361 1462 1.816835 CTGCATCCTCTGTTGCATGTT 59.183 47.619 0.00 0.00 44.04 2.71
1536 1637 1.980232 CTGCTTGCTTCCCCATGCA 60.980 57.895 0.00 0.00 41.67 3.96
1596 1729 1.633915 CCCAGCAGCCTCTCCTCAAT 61.634 60.000 0.00 0.00 0.00 2.57
1667 1810 3.797353 GCTGCCCCCTGGATTCGA 61.797 66.667 0.00 0.00 0.00 3.71
1701 1848 3.425938 GAACGCTGCTCGCAATCGG 62.426 63.158 14.55 0.00 43.23 4.18
1769 1916 0.618458 AGCCAAATAACAGCCTCGGA 59.382 50.000 0.00 0.00 0.00 4.55
1784 1931 4.608514 TGGGGACAGGGGAAGCCA 62.609 66.667 0.00 0.00 35.01 4.75
1793 1940 2.710096 ATGGAATACGTTGGGGACAG 57.290 50.000 0.00 0.00 44.54 3.51
2014 2166 0.613260 CACACTGCCCTGCCTAGTAA 59.387 55.000 0.00 0.00 0.00 2.24
2035 2187 8.774890 TCACAATTATGGTCAAAATTCCAATG 57.225 30.769 0.00 0.00 37.27 2.82
2102 2254 5.319043 ACAATATCCCAATTCCCACGTAT 57.681 39.130 0.00 0.00 0.00 3.06
2199 2351 7.805083 ATCCTAGCATGTCCAGTAATCTTAT 57.195 36.000 0.00 0.00 0.00 1.73
2318 2472 6.658188 AAAATGGAACGACTGGGAATTTAA 57.342 33.333 0.00 0.00 0.00 1.52
2447 2604 0.674895 CTTCCTGGTTCCCTTGAGCG 60.675 60.000 0.00 0.00 0.00 5.03
2581 2738 9.374838 CCAATCAATAAAGAAGAAAAATGGGAG 57.625 33.333 0.00 0.00 0.00 4.30
2691 2848 7.394816 ACACTGCTCCAACTAATACAACTAAT 58.605 34.615 0.00 0.00 0.00 1.73
2692 2849 6.765403 ACACTGCTCCAACTAATACAACTAA 58.235 36.000 0.00 0.00 0.00 2.24
2693 2850 6.354794 ACACTGCTCCAACTAATACAACTA 57.645 37.500 0.00 0.00 0.00 2.24
2694 2851 5.228945 ACACTGCTCCAACTAATACAACT 57.771 39.130 0.00 0.00 0.00 3.16
2695 2852 7.414098 CCATTACACTGCTCCAACTAATACAAC 60.414 40.741 0.00 0.00 0.00 3.32
2696 2853 6.597672 CCATTACACTGCTCCAACTAATACAA 59.402 38.462 0.00 0.00 0.00 2.41
2697 2854 6.070481 TCCATTACACTGCTCCAACTAATACA 60.070 38.462 0.00 0.00 0.00 2.29
2698 2855 6.346096 TCCATTACACTGCTCCAACTAATAC 58.654 40.000 0.00 0.00 0.00 1.89
2699 2856 6.553953 TCCATTACACTGCTCCAACTAATA 57.446 37.500 0.00 0.00 0.00 0.98
2761 2918 4.353777 ACAGGTAGTCAGGCAGAAGAATA 58.646 43.478 0.00 0.00 0.00 1.75
2870 3032 2.249692 GGCAAATCCCGAACGTTCA 58.750 52.632 26.71 9.14 0.00 3.18
2929 3091 0.687354 ACTGAACTTGCCATCCTCGT 59.313 50.000 0.00 0.00 0.00 4.18
2957 3119 2.162319 TTTTTCCAGGAAATTGCCGC 57.838 45.000 15.75 0.00 31.34 6.53
3318 3480 7.363793 GGAAATGATGCAGTTTAACCTAACCAT 60.364 37.037 0.00 0.00 0.00 3.55
3399 3561 9.988350 ACATTGCACGTCTAATTAAGAATTTAG 57.012 29.630 0.00 0.00 35.47 1.85
3466 3628 8.730680 GGAGCTTAGATGTGACATTCTTAAAAA 58.269 33.333 0.00 0.00 0.00 1.94
3467 3629 7.336931 GGGAGCTTAGATGTGACATTCTTAAAA 59.663 37.037 0.00 0.00 0.00 1.52
3468 3630 6.823689 GGGAGCTTAGATGTGACATTCTTAAA 59.176 38.462 0.00 0.00 0.00 1.52
3469 3631 6.070251 TGGGAGCTTAGATGTGACATTCTTAA 60.070 38.462 0.00 0.00 0.00 1.85
3470 3632 5.425217 TGGGAGCTTAGATGTGACATTCTTA 59.575 40.000 0.00 0.00 0.00 2.10
3471 3633 4.225942 TGGGAGCTTAGATGTGACATTCTT 59.774 41.667 0.00 0.00 0.00 2.52
3472 3634 3.776969 TGGGAGCTTAGATGTGACATTCT 59.223 43.478 0.00 1.32 0.00 2.40
3473 3635 3.873952 GTGGGAGCTTAGATGTGACATTC 59.126 47.826 0.00 0.00 0.00 2.67
3474 3636 3.264193 TGTGGGAGCTTAGATGTGACATT 59.736 43.478 0.00 0.00 0.00 2.71
3475 3637 2.840038 TGTGGGAGCTTAGATGTGACAT 59.160 45.455 0.00 0.00 0.00 3.06
3476 3638 2.256306 TGTGGGAGCTTAGATGTGACA 58.744 47.619 0.00 0.00 0.00 3.58
3477 3639 3.334583 TTGTGGGAGCTTAGATGTGAC 57.665 47.619 0.00 0.00 0.00 3.67
3478 3640 4.574674 ATTTGTGGGAGCTTAGATGTGA 57.425 40.909 0.00 0.00 0.00 3.58
3479 3641 9.725019 TTATATATTTGTGGGAGCTTAGATGTG 57.275 33.333 0.00 0.00 0.00 3.21
3482 3644 9.401058 GCATTATATATTTGTGGGAGCTTAGAT 57.599 33.333 0.00 0.00 0.00 1.98
3483 3645 8.382405 TGCATTATATATTTGTGGGAGCTTAGA 58.618 33.333 0.00 0.00 0.00 2.10
3484 3646 8.565896 TGCATTATATATTTGTGGGAGCTTAG 57.434 34.615 0.00 0.00 0.00 2.18
3485 3647 7.121168 GCTGCATTATATATTTGTGGGAGCTTA 59.879 37.037 0.00 0.00 0.00 3.09
3486 3648 6.071728 GCTGCATTATATATTTGTGGGAGCTT 60.072 38.462 0.00 0.00 0.00 3.74
3487 3649 5.416952 GCTGCATTATATATTTGTGGGAGCT 59.583 40.000 0.00 0.00 0.00 4.09
3488 3650 5.183713 TGCTGCATTATATATTTGTGGGAGC 59.816 40.000 0.00 0.00 0.00 4.70
3489 3651 6.822667 TGCTGCATTATATATTTGTGGGAG 57.177 37.500 0.00 0.00 0.00 4.30
3490 3652 6.548993 TGTTGCTGCATTATATATTTGTGGGA 59.451 34.615 1.84 0.00 0.00 4.37
3491 3653 6.747125 TGTTGCTGCATTATATATTTGTGGG 58.253 36.000 1.84 0.00 0.00 4.61
3492 3654 8.136800 TCTTGTTGCTGCATTATATATTTGTGG 58.863 33.333 1.84 0.00 0.00 4.17
3493 3655 9.518906 TTCTTGTTGCTGCATTATATATTTGTG 57.481 29.630 1.84 0.00 0.00 3.33
3496 3658 9.533253 GGTTTCTTGTTGCTGCATTATATATTT 57.467 29.630 1.84 0.00 0.00 1.40
3497 3659 8.694540 TGGTTTCTTGTTGCTGCATTATATATT 58.305 29.630 1.84 0.00 0.00 1.28
3498 3660 8.236585 TGGTTTCTTGTTGCTGCATTATATAT 57.763 30.769 1.84 0.00 0.00 0.86
3499 3661 7.637631 TGGTTTCTTGTTGCTGCATTATATA 57.362 32.000 1.84 0.00 0.00 0.86
3500 3662 6.528537 TGGTTTCTTGTTGCTGCATTATAT 57.471 33.333 1.84 0.00 0.00 0.86
3501 3663 5.973899 TGGTTTCTTGTTGCTGCATTATA 57.026 34.783 1.84 0.00 0.00 0.98
3502 3664 4.870123 TGGTTTCTTGTTGCTGCATTAT 57.130 36.364 1.84 0.00 0.00 1.28
3503 3665 4.662468 TTGGTTTCTTGTTGCTGCATTA 57.338 36.364 1.84 0.00 0.00 1.90
3504 3666 3.540314 TTGGTTTCTTGTTGCTGCATT 57.460 38.095 1.84 0.00 0.00 3.56
3505 3667 3.540314 TTTGGTTTCTTGTTGCTGCAT 57.460 38.095 1.84 0.00 0.00 3.96
3506 3668 3.325293 TTTTGGTTTCTTGTTGCTGCA 57.675 38.095 0.00 0.00 0.00 4.41
3552 3714 3.567164 AGCTGATTTCCACTCTGTTTGTG 59.433 43.478 0.00 0.00 35.39 3.33
3553 3715 3.825328 AGCTGATTTCCACTCTGTTTGT 58.175 40.909 0.00 0.00 0.00 2.83
3554 3716 4.843220 AAGCTGATTTCCACTCTGTTTG 57.157 40.909 0.00 0.00 0.00 2.93
3555 3717 5.869579 TCTAAGCTGATTTCCACTCTGTTT 58.130 37.500 0.00 0.00 0.00 2.83
3556 3718 5.489792 TCTAAGCTGATTTCCACTCTGTT 57.510 39.130 0.00 0.00 0.00 3.16
3557 3719 5.046014 ACATCTAAGCTGATTTCCACTCTGT 60.046 40.000 0.00 0.00 0.00 3.41
3558 3720 5.293814 CACATCTAAGCTGATTTCCACTCTG 59.706 44.000 0.00 0.00 0.00 3.35
3559 3721 5.188555 TCACATCTAAGCTGATTTCCACTCT 59.811 40.000 0.00 0.00 0.00 3.24
3560 3722 5.293079 GTCACATCTAAGCTGATTTCCACTC 59.707 44.000 0.00 0.00 0.00 3.51
3561 3723 5.181748 GTCACATCTAAGCTGATTTCCACT 58.818 41.667 0.00 0.00 0.00 4.00
3562 3724 4.937620 TGTCACATCTAAGCTGATTTCCAC 59.062 41.667 0.00 0.00 0.00 4.02
3563 3725 5.164620 TGTCACATCTAAGCTGATTTCCA 57.835 39.130 0.00 0.00 0.00 3.53
3564 3726 6.989169 ACTATGTCACATCTAAGCTGATTTCC 59.011 38.462 0.00 0.00 0.00 3.13
3565 3727 8.430801 AACTATGTCACATCTAAGCTGATTTC 57.569 34.615 0.00 0.00 0.00 2.17
3567 3729 9.486497 CATAACTATGTCACATCTAAGCTGATT 57.514 33.333 0.00 0.00 0.00 2.57
3568 3730 8.646004 ACATAACTATGTCACATCTAAGCTGAT 58.354 33.333 0.00 0.00 42.96 2.90
3569 3731 8.011844 ACATAACTATGTCACATCTAAGCTGA 57.988 34.615 0.00 0.00 42.96 4.26
3597 3759 5.240623 GGTCTGTCTAGGACACATCTAGATG 59.759 48.000 27.63 27.63 43.25 2.90
3598 3760 5.381757 GGTCTGTCTAGGACACATCTAGAT 58.618 45.833 0.00 0.00 43.25 1.98
3599 3761 4.385421 GGGTCTGTCTAGGACACATCTAGA 60.385 50.000 0.00 0.00 37.67 2.43
3600 3762 3.886505 GGGTCTGTCTAGGACACATCTAG 59.113 52.174 0.00 0.00 37.67 2.43
3601 3763 3.528078 AGGGTCTGTCTAGGACACATCTA 59.472 47.826 3.18 0.00 39.36 1.98
3602 3764 2.313342 AGGGTCTGTCTAGGACACATCT 59.687 50.000 3.18 0.00 39.36 2.90
3603 3765 2.741145 AGGGTCTGTCTAGGACACATC 58.259 52.381 3.18 0.00 39.36 3.06
3604 3766 2.930109 AGGGTCTGTCTAGGACACAT 57.070 50.000 3.18 0.00 39.36 3.21
3605 3767 5.457778 GGATATAGGGTCTGTCTAGGACACA 60.458 48.000 3.18 0.00 39.36 3.72
3606 3768 5.011586 GGATATAGGGTCTGTCTAGGACAC 58.988 50.000 0.00 0.00 37.67 3.67
3607 3769 4.668335 TGGATATAGGGTCTGTCTAGGACA 59.332 45.833 0.43 0.43 40.50 4.02
3608 3770 5.258216 TGGATATAGGGTCTGTCTAGGAC 57.742 47.826 0.00 0.00 0.00 3.85
3609 3771 5.942977 TTGGATATAGGGTCTGTCTAGGA 57.057 43.478 0.00 0.00 0.00 2.94
3610 3772 5.105146 GCATTGGATATAGGGTCTGTCTAGG 60.105 48.000 0.00 0.00 0.00 3.02
3611 3773 5.105146 GGCATTGGATATAGGGTCTGTCTAG 60.105 48.000 0.00 0.00 0.00 2.43
3612 3774 4.777896 GGCATTGGATATAGGGTCTGTCTA 59.222 45.833 0.00 0.00 0.00 2.59
3613 3775 3.584848 GGCATTGGATATAGGGTCTGTCT 59.415 47.826 0.00 0.00 0.00 3.41
3614 3776 3.327757 TGGCATTGGATATAGGGTCTGTC 59.672 47.826 0.00 0.00 0.00 3.51
3615 3777 3.073062 GTGGCATTGGATATAGGGTCTGT 59.927 47.826 0.00 0.00 0.00 3.41
3616 3778 3.072915 TGTGGCATTGGATATAGGGTCTG 59.927 47.826 0.00 0.00 0.00 3.51
3617 3779 3.326521 TGTGGCATTGGATATAGGGTCT 58.673 45.455 0.00 0.00 0.00 3.85
3618 3780 3.073062 ACTGTGGCATTGGATATAGGGTC 59.927 47.826 0.00 0.00 0.00 4.46
3619 3781 3.056080 ACTGTGGCATTGGATATAGGGT 58.944 45.455 0.00 0.00 0.00 4.34
3620 3782 3.795688 ACTGTGGCATTGGATATAGGG 57.204 47.619 0.00 0.00 0.00 3.53
3621 3783 3.748048 CGAACTGTGGCATTGGATATAGG 59.252 47.826 0.00 0.00 0.00 2.57
3622 3784 3.187227 GCGAACTGTGGCATTGGATATAG 59.813 47.826 0.00 0.00 0.00 1.31
3623 3785 3.138304 GCGAACTGTGGCATTGGATATA 58.862 45.455 0.00 0.00 0.00 0.86
3624 3786 1.949525 GCGAACTGTGGCATTGGATAT 59.050 47.619 0.00 0.00 0.00 1.63
3625 3787 1.339535 TGCGAACTGTGGCATTGGATA 60.340 47.619 3.02 0.00 32.99 2.59
3626 3788 0.608856 TGCGAACTGTGGCATTGGAT 60.609 50.000 3.02 0.00 32.99 3.41
3627 3789 0.608856 ATGCGAACTGTGGCATTGGA 60.609 50.000 12.24 0.00 45.88 3.53
3628 3790 1.093972 TATGCGAACTGTGGCATTGG 58.906 50.000 20.14 0.00 45.88 3.16
3629 3791 2.355444 TGATATGCGAACTGTGGCATTG 59.645 45.455 20.14 0.00 45.88 2.82
3630 3792 2.355756 GTGATATGCGAACTGTGGCATT 59.644 45.455 20.14 11.09 45.88 3.56
4075 4258 5.211631 GGCTTACCATAGGTTGTCCACCA 62.212 52.174 0.00 0.00 41.69 4.17
4123 4306 6.720288 ACAGGTATACTTGTGGCCTATACTAG 59.280 42.308 18.86 9.45 34.73 2.57
4212 4395 6.092259 GGTCTACGATCATGCAAAGTTACTTT 59.908 38.462 4.30 4.30 33.58 2.66
4380 4563 8.686397 TTAATATGGCATTATATTGCTTTGCG 57.314 30.769 16.80 0.00 42.38 4.85
4512 4696 8.345724 AGCATCAGAAACAGAAACATCTAATT 57.654 30.769 0.00 0.00 0.00 1.40
4534 4718 7.241042 ACCAACTCTTAACTATACTGAAGCA 57.759 36.000 0.00 0.00 0.00 3.91
4580 4764 9.468532 GAATTCACTTGATTATTTTGCCCTATC 57.531 33.333 0.00 0.00 0.00 2.08
4581 4765 9.205513 AGAATTCACTTGATTATTTTGCCCTAT 57.794 29.630 8.44 0.00 0.00 2.57
4582 4766 8.593945 AGAATTCACTTGATTATTTTGCCCTA 57.406 30.769 8.44 0.00 0.00 3.53
4583 4767 7.364144 GGAGAATTCACTTGATTATTTTGCCCT 60.364 37.037 8.44 0.00 0.00 5.19
4586 4770 8.937634 ATGGAGAATTCACTTGATTATTTTGC 57.062 30.769 8.44 0.00 0.00 3.68
4633 4817 2.200067 GTGGTGCAGATCGATCTTCAG 58.800 52.381 25.11 15.82 34.22 3.02
4659 4843 8.756736 TGAAATGACGTTCACCCTACGATAGTA 61.757 40.741 2.12 0.00 40.62 1.82
4660 4844 8.017611 TGAAATGACGTTCACCCTACGATAGT 62.018 42.308 2.12 0.00 42.09 2.12
4661 4845 3.984508 ATGACGTTCACCCTACGATAG 57.015 47.619 2.12 0.00 41.33 2.08
4662 4846 4.158209 TGAAATGACGTTCACCCTACGATA 59.842 41.667 2.12 0.00 41.33 2.92
4663 4847 3.056393 TGAAATGACGTTCACCCTACGAT 60.056 43.478 2.12 0.00 41.33 3.73
4664 4848 2.296752 TGAAATGACGTTCACCCTACGA 59.703 45.455 2.12 0.00 41.33 3.43
4665 4849 2.679450 TGAAATGACGTTCACCCTACG 58.321 47.619 0.00 0.00 44.20 3.51
4666 4850 4.935808 AGAATGAAATGACGTTCACCCTAC 59.064 41.667 0.00 0.00 40.22 3.18
4677 4863 9.270640 ACAGATATAGCAGAAGAATGAAATGAC 57.729 33.333 0.00 0.00 0.00 3.06
4726 4912 5.719173 TCCTTGCTATTTTTATGTTGGCAC 58.281 37.500 0.00 0.00 0.00 5.01
4729 4915 7.280652 CCCAAATCCTTGCTATTTTTATGTTGG 59.719 37.037 0.00 0.00 0.00 3.77
4744 4930 5.067023 GCTGACTTCTATTCCCAAATCCTTG 59.933 44.000 0.00 0.00 0.00 3.61
4764 4950 2.908688 TGTCAAAGTGTAGCAGCTGA 57.091 45.000 20.43 0.00 0.00 4.26
4765 4951 4.494350 AATTGTCAAAGTGTAGCAGCTG 57.506 40.909 10.11 10.11 0.00 4.24
4790 4976 5.221382 GCACAAATCTGCCTTCATCCATATT 60.221 40.000 0.00 0.00 0.00 1.28
4798 4984 1.888512 GGAAGCACAAATCTGCCTTCA 59.111 47.619 0.00 0.00 37.96 3.02
4804 4990 4.935702 TGAACAAAGGAAGCACAAATCTG 58.064 39.130 0.00 0.00 0.00 2.90
4805 4991 5.537674 AGATGAACAAAGGAAGCACAAATCT 59.462 36.000 0.00 0.00 0.00 2.40
4812 4998 2.158475 ACCCAGATGAACAAAGGAAGCA 60.158 45.455 0.00 0.00 0.00 3.91
4818 5004 7.064728 GCTTAGTAACTACCCAGATGAACAAAG 59.935 40.741 0.00 0.00 0.00 2.77
4833 5019 5.126545 TCAATTCGCTCCAGCTTAGTAACTA 59.873 40.000 0.00 0.00 39.32 2.24
4838 5024 3.334583 TTCAATTCGCTCCAGCTTAGT 57.665 42.857 0.00 0.00 39.32 2.24
4850 5036 6.688385 ACATTGCGACTAATGAATTCAATTCG 59.312 34.615 13.09 17.05 42.15 3.34
4861 5047 6.183360 TGCCTTTTACTACATTGCGACTAATG 60.183 38.462 0.00 0.00 42.38 1.90
4862 5048 5.878116 TGCCTTTTACTACATTGCGACTAAT 59.122 36.000 0.00 0.00 0.00 1.73
4868 5054 3.911964 GTGTTGCCTTTTACTACATTGCG 59.088 43.478 0.00 0.00 0.00 4.85
4870 5056 9.638239 ATTTATGTGTTGCCTTTTACTACATTG 57.362 29.630 0.00 0.00 0.00 2.82
4889 5075 9.405587 CAAGTACCACGAAATTGAAATTTATGT 57.594 29.630 1.10 1.56 38.64 2.29
4901 5087 5.547465 TCAGACATTCAAGTACCACGAAAT 58.453 37.500 0.00 0.00 0.00 2.17
4905 5091 3.914312 ACTCAGACATTCAAGTACCACG 58.086 45.455 0.00 0.00 0.00 4.94
4906 5092 5.542779 AGAACTCAGACATTCAAGTACCAC 58.457 41.667 0.00 0.00 0.00 4.16
4907 5093 5.304357 TGAGAACTCAGACATTCAAGTACCA 59.696 40.000 0.00 0.00 34.14 3.25
4908 5094 5.784177 TGAGAACTCAGACATTCAAGTACC 58.216 41.667 0.00 0.00 34.14 3.34
4922 5108 5.751990 GTCGAGGTTAAAAACTGAGAACTCA 59.248 40.000 4.45 4.45 38.06 3.41
4923 5109 5.751990 TGTCGAGGTTAAAAACTGAGAACTC 59.248 40.000 0.00 0.00 0.00 3.01
4924 5110 5.667466 TGTCGAGGTTAAAAACTGAGAACT 58.333 37.500 0.00 0.00 0.00 3.01
4925 5111 5.751990 TCTGTCGAGGTTAAAAACTGAGAAC 59.248 40.000 0.00 0.00 0.00 3.01
4937 5227 2.040012 ACCAGTCTCTCTGTCGAGGTTA 59.960 50.000 0.00 0.00 42.19 2.85
4948 5238 2.191128 AATGCCAACACCAGTCTCTC 57.809 50.000 0.00 0.00 0.00 3.20
4984 5274 6.836242 TGTATATGGTTCATGCATGTCCTAA 58.164 36.000 28.85 21.60 0.00 2.69
4991 5281 6.218019 GCAACATTGTATATGGTTCATGCAT 58.782 36.000 0.00 0.00 0.00 3.96
5014 5307 1.000731 TGTAAGCAAATTGGCACTGGC 59.999 47.619 7.75 0.00 40.13 4.85
5032 5325 5.499004 TGCTACCCAAGAATAAGAACTGT 57.501 39.130 0.00 0.00 0.00 3.55
5035 5328 5.066505 CCACATGCTACCCAAGAATAAGAAC 59.933 44.000 0.00 0.00 0.00 3.01
5078 5371 7.725251 AGCAAAACCTTGACAATCAAAGAATA 58.275 30.769 0.00 0.00 35.73 1.75
5085 5378 3.380004 ACGAAGCAAAACCTTGACAATCA 59.620 39.130 0.00 0.00 34.14 2.57
5086 5379 3.964909 ACGAAGCAAAACCTTGACAATC 58.035 40.909 0.00 0.00 34.14 2.67
5087 5380 4.111916 CAACGAAGCAAAACCTTGACAAT 58.888 39.130 0.00 0.00 34.14 2.71
5088 5381 3.057174 ACAACGAAGCAAAACCTTGACAA 60.057 39.130 0.00 0.00 34.14 3.18
5096 5390 2.354821 AGAGGACACAACGAAGCAAAAC 59.645 45.455 0.00 0.00 0.00 2.43
5099 5393 2.325583 AAGAGGACACAACGAAGCAA 57.674 45.000 0.00 0.00 0.00 3.91
5105 5399 4.307432 ACATACAGAAAGAGGACACAACG 58.693 43.478 0.00 0.00 0.00 4.10
5106 5400 5.527582 ACAACATACAGAAAGAGGACACAAC 59.472 40.000 0.00 0.00 0.00 3.32
5108 5402 5.290493 ACAACATACAGAAAGAGGACACA 57.710 39.130 0.00 0.00 0.00 3.72
5111 5405 7.724305 TGTTAACAACATACAGAAAGAGGAC 57.276 36.000 5.64 0.00 36.25 3.85
5126 5420 6.904543 GGCACATGTCAATTTTTGTTAACAAC 59.095 34.615 20.43 8.78 35.28 3.32
5131 5425 5.069648 TGGAGGCACATGTCAATTTTTGTTA 59.930 36.000 0.00 0.00 0.00 2.41
5133 5427 3.387374 TGGAGGCACATGTCAATTTTTGT 59.613 39.130 0.00 0.00 0.00 2.83
5134 5428 3.992643 TGGAGGCACATGTCAATTTTTG 58.007 40.909 0.00 0.00 0.00 2.44
5137 5433 3.579586 ACAATGGAGGCACATGTCAATTT 59.420 39.130 0.00 0.00 0.00 1.82
5153 5449 1.884579 GGAGATATGGCTGCACAATGG 59.115 52.381 0.50 0.00 0.00 3.16
5175 5471 2.167219 ATGTTGATGCCGCGACTCG 61.167 57.895 8.23 0.00 38.08 4.18
5217 5513 1.606224 GCGTTAAGAAACCGACCTCCA 60.606 52.381 0.00 0.00 31.46 3.86
5223 5519 3.196463 TGACTTTGCGTTAAGAAACCGA 58.804 40.909 5.80 0.00 31.46 4.69
5340 5636 2.346803 GACTTATCGGCTGAAGTTGCA 58.653 47.619 0.00 0.00 36.04 4.08
5403 5699 2.964464 ACAAAACTGTTGGCATGGATCA 59.036 40.909 0.00 0.00 0.00 2.92
5448 5744 0.104855 TGCCAGCGCGATTCTATCTT 59.895 50.000 12.10 0.00 38.08 2.40
5452 5748 2.106938 CCTGCCAGCGCGATTCTA 59.893 61.111 12.10 0.00 38.08 2.10
5467 5763 2.376109 CGGATATATCCTACGGCACCT 58.624 52.381 25.83 0.00 44.93 4.00
5474 5770 4.204012 AGAGCAGAGCGGATATATCCTAC 58.796 47.826 25.83 18.52 44.93 3.18
5531 5827 2.672651 CACGGACCAATGCTGCCA 60.673 61.111 0.00 0.00 0.00 4.92
5532 5828 1.805428 AAACACGGACCAATGCTGCC 61.805 55.000 0.00 0.00 0.00 4.85
5613 5914 0.179065 CCGAACCCGAGGATAAACCC 60.179 60.000 0.00 0.00 40.05 4.11
5616 5917 1.479323 CTGACCGAACCCGAGGATAAA 59.521 52.381 0.00 0.00 38.22 1.40
5620 5921 2.678934 CCTGACCGAACCCGAGGA 60.679 66.667 0.00 0.00 38.22 3.71
5623 5924 2.678934 CCTCCTGACCGAACCCGA 60.679 66.667 0.00 0.00 38.22 5.14
5650 5951 9.273016 GCACTATTATACTTCTTTCATAAGCCA 57.727 33.333 0.00 0.00 0.00 4.75
5651 5952 9.495572 AGCACTATTATACTTCTTTCATAAGCC 57.504 33.333 0.00 0.00 0.00 4.35
5712 6015 1.089112 CGAATGAGGATGCAGCACAA 58.911 50.000 3.51 0.00 0.00 3.33
5778 6084 2.964464 TGCAATCAAGGGCAAAGAAAGA 59.036 40.909 0.00 0.00 37.03 2.52
5897 6205 3.550842 GGCAACTGAACTCAATGGACAAC 60.551 47.826 0.00 0.00 0.00 3.32
5935 6243 0.179032 AATGTGTTCACGGCAGTCCA 60.179 50.000 0.00 0.00 0.00 4.02
5936 6244 0.951558 AAATGTGTTCACGGCAGTCC 59.048 50.000 0.00 0.00 0.00 3.85
5944 6252 1.613437 CCAGGGTCCAAATGTGTTCAC 59.387 52.381 0.00 0.00 0.00 3.18
5987 6296 3.803340 TGGAATGGAGGGAGTAGTTCTT 58.197 45.455 0.00 0.00 0.00 2.52
5992 6301 6.500589 TCTATTTTGGAATGGAGGGAGTAG 57.499 41.667 0.00 0.00 30.37 2.57
5995 6304 5.767168 GTCATCTATTTTGGAATGGAGGGAG 59.233 44.000 0.00 0.00 36.39 4.30
5997 6306 5.699143 AGTCATCTATTTTGGAATGGAGGG 58.301 41.667 0.00 0.00 36.39 4.30
5998 6307 6.359804 TGAGTCATCTATTTTGGAATGGAGG 58.640 40.000 0.00 0.00 36.39 4.30
6000 6309 8.827832 ATTTGAGTCATCTATTTTGGAATGGA 57.172 30.769 0.00 0.00 37.20 3.41
6004 6313 9.973661 TCCTTATTTGAGTCATCTATTTTGGAA 57.026 29.630 0.00 0.00 0.00 3.53
6006 6315 8.348507 GCTCCTTATTTGAGTCATCTATTTTGG 58.651 37.037 0.00 0.00 32.31 3.28
6007 6316 8.896744 TGCTCCTTATTTGAGTCATCTATTTTG 58.103 33.333 0.00 0.00 32.31 2.44
6008 6317 9.638176 ATGCTCCTTATTTGAGTCATCTATTTT 57.362 29.630 0.00 0.00 32.31 1.82
6013 6322 7.215789 CACTATGCTCCTTATTTGAGTCATCT 58.784 38.462 0.00 0.00 32.62 2.90
6014 6323 6.426328 CCACTATGCTCCTTATTTGAGTCATC 59.574 42.308 0.00 0.00 32.62 2.92
6015 6324 6.100279 TCCACTATGCTCCTTATTTGAGTCAT 59.900 38.462 0.00 0.00 33.89 3.06
6016 6325 5.425217 TCCACTATGCTCCTTATTTGAGTCA 59.575 40.000 0.00 0.00 32.31 3.41
6017 6326 5.918608 TCCACTATGCTCCTTATTTGAGTC 58.081 41.667 0.00 0.00 32.31 3.36
6018 6327 5.957771 TCCACTATGCTCCTTATTTGAGT 57.042 39.130 0.00 0.00 32.31 3.41
6019 6328 6.293845 GCAATCCACTATGCTCCTTATTTGAG 60.294 42.308 0.00 0.00 39.46 3.02
6020 6329 5.532406 GCAATCCACTATGCTCCTTATTTGA 59.468 40.000 0.00 0.00 39.46 2.69
6022 6331 4.829492 GGCAATCCACTATGCTCCTTATTT 59.171 41.667 0.00 0.00 42.20 1.40
6023 6332 4.105377 AGGCAATCCACTATGCTCCTTATT 59.895 41.667 0.00 0.00 42.20 1.40
6024 6333 3.654806 AGGCAATCCACTATGCTCCTTAT 59.345 43.478 0.00 0.00 42.20 1.73
6026 6335 1.849039 AGGCAATCCACTATGCTCCTT 59.151 47.619 0.00 0.00 42.20 3.36
6027 6336 1.419387 GAGGCAATCCACTATGCTCCT 59.581 52.381 0.00 0.00 42.20 3.69
6029 6338 2.492012 CAGAGGCAATCCACTATGCTC 58.508 52.381 0.00 0.00 42.20 4.26
6030 6339 1.476471 GCAGAGGCAATCCACTATGCT 60.476 52.381 4.26 0.00 45.61 3.79
6031 6340 0.950116 GCAGAGGCAATCCACTATGC 59.050 55.000 0.00 0.00 43.49 3.14
6033 6342 1.069823 CGAGCAGAGGCAATCCACTAT 59.930 52.381 0.00 0.00 44.61 2.12
6034 6343 0.461548 CGAGCAGAGGCAATCCACTA 59.538 55.000 0.00 0.00 44.61 2.74
6035 6344 1.220206 CGAGCAGAGGCAATCCACT 59.780 57.895 0.00 0.00 44.61 4.00
6036 6345 1.817099 CCGAGCAGAGGCAATCCAC 60.817 63.158 0.00 0.00 44.61 4.02
6037 6346 1.964608 CTCCGAGCAGAGGCAATCCA 61.965 60.000 0.00 0.00 44.61 3.41
6039 6348 0.529555 GACTCCGAGCAGAGGCAATC 60.530 60.000 0.00 0.00 41.95 2.67
6040 6349 1.519719 GACTCCGAGCAGAGGCAAT 59.480 57.895 0.00 0.00 41.95 3.56
6041 6350 2.650116 GGACTCCGAGCAGAGGCAA 61.650 63.158 6.60 0.00 44.39 4.52
6042 6351 3.071206 GGACTCCGAGCAGAGGCA 61.071 66.667 6.60 0.00 44.39 4.75
6043 6352 3.844090 GGGACTCCGAGCAGAGGC 61.844 72.222 0.00 0.09 41.60 4.70
6045 6354 1.254284 AACAGGGACTCCGAGCAGAG 61.254 60.000 0.00 0.00 34.60 3.35
6046 6355 1.228894 AACAGGGACTCCGAGCAGA 60.229 57.895 0.00 0.00 34.60 4.26
6047 6356 1.216710 GAACAGGGACTCCGAGCAG 59.783 63.158 0.00 0.00 34.60 4.24
6048 6357 2.636412 CGAACAGGGACTCCGAGCA 61.636 63.158 0.00 0.00 34.60 4.26
6049 6358 2.182030 CGAACAGGGACTCCGAGC 59.818 66.667 0.00 0.00 34.60 5.03
6050 6359 2.885861 CCGAACAGGGACTCCGAG 59.114 66.667 0.00 0.00 34.60 4.63
6051 6360 3.379445 GCCGAACAGGGACTCCGA 61.379 66.667 0.00 0.00 41.48 4.55
6052 6361 4.452733 GGCCGAACAGGGACTCCG 62.453 72.222 0.00 0.00 41.48 4.63
6053 6362 4.097361 GGGCCGAACAGGGACTCC 62.097 72.222 0.00 0.00 41.48 3.85
6054 6363 3.003763 AGGGCCGAACAGGGACTC 61.004 66.667 0.00 0.00 41.48 3.36
6055 6364 3.003763 GAGGGCCGAACAGGGACT 61.004 66.667 0.00 0.00 41.48 3.85
6056 6365 3.003763 AGAGGGCCGAACAGGGAC 61.004 66.667 0.00 0.00 41.48 4.46
6057 6366 3.003173 CAGAGGGCCGAACAGGGA 61.003 66.667 0.00 0.00 41.48 4.20
6058 6367 4.785453 GCAGAGGGCCGAACAGGG 62.785 72.222 0.00 0.00 41.48 4.45
6059 6368 3.672295 GAGCAGAGGGCCGAACAGG 62.672 68.421 0.00 0.00 46.50 4.00
6060 6369 2.125350 GAGCAGAGGGCCGAACAG 60.125 66.667 0.00 0.00 46.50 3.16
6061 6370 3.706373 GGAGCAGAGGGCCGAACA 61.706 66.667 0.00 0.00 46.50 3.18
6079 6388 0.537653 GAGTAACTCCACCTGCTCCC 59.462 60.000 0.00 0.00 0.00 4.30
6095 6404 4.962995 TCCCTCGAATTTAAGGATCAGAGT 59.037 41.667 8.29 0.00 34.35 3.24
6097 6406 4.202264 GCTCCCTCGAATTTAAGGATCAGA 60.202 45.833 8.29 0.00 34.35 3.27
6098 6407 4.061596 GCTCCCTCGAATTTAAGGATCAG 58.938 47.826 8.29 3.66 34.35 2.90
6100 6409 4.344359 AGCTCCCTCGAATTTAAGGATC 57.656 45.455 8.29 0.00 34.35 3.36
6102 6411 4.099573 CAGTAGCTCCCTCGAATTTAAGGA 59.900 45.833 8.29 0.00 34.35 3.36
6103 6412 4.372656 CAGTAGCTCCCTCGAATTTAAGG 58.627 47.826 0.00 1.04 0.00 2.69
6105 6414 4.028131 TCCAGTAGCTCCCTCGAATTTAA 58.972 43.478 0.00 0.00 0.00 1.52
6106 6415 3.638860 TCCAGTAGCTCCCTCGAATTTA 58.361 45.455 0.00 0.00 0.00 1.40
6107 6416 2.467880 TCCAGTAGCTCCCTCGAATTT 58.532 47.619 0.00 0.00 0.00 1.82
6108 6417 2.160721 TCCAGTAGCTCCCTCGAATT 57.839 50.000 0.00 0.00 0.00 2.17
6109 6418 2.366916 CAATCCAGTAGCTCCCTCGAAT 59.633 50.000 0.00 0.00 0.00 3.34
6110 6419 1.757118 CAATCCAGTAGCTCCCTCGAA 59.243 52.381 0.00 0.00 0.00 3.71
6111 6420 1.403814 CAATCCAGTAGCTCCCTCGA 58.596 55.000 0.00 0.00 0.00 4.04
6112 6421 0.249657 GCAATCCAGTAGCTCCCTCG 60.250 60.000 0.00 0.00 0.00 4.63
6116 6425 0.178068 TTCGGCAATCCAGTAGCTCC 59.822 55.000 0.00 0.00 0.00 4.70
6120 6429 2.006772 GCGTTCGGCAATCCAGTAG 58.993 57.895 0.00 0.00 42.87 2.57
6121 6430 4.195308 GCGTTCGGCAATCCAGTA 57.805 55.556 0.00 0.00 42.87 2.74
6130 6439 0.720027 GAAAGTAAGGAGCGTTCGGC 59.280 55.000 0.00 0.00 44.05 5.54
6132 6441 4.377124 GGAAAAGAAAGTAAGGAGCGTTCG 60.377 45.833 0.00 0.00 31.42 3.95
6133 6442 4.083431 GGGAAAAGAAAGTAAGGAGCGTTC 60.083 45.833 0.00 0.00 0.00 3.95
6135 6444 3.409570 GGGAAAAGAAAGTAAGGAGCGT 58.590 45.455 0.00 0.00 0.00 5.07
6136 6445 2.747989 GGGGAAAAGAAAGTAAGGAGCG 59.252 50.000 0.00 0.00 0.00 5.03
6137 6446 4.011023 GAGGGGAAAAGAAAGTAAGGAGC 58.989 47.826 0.00 0.00 0.00 4.70
6138 6447 5.492895 GAGAGGGGAAAAGAAAGTAAGGAG 58.507 45.833 0.00 0.00 0.00 3.69
6139 6448 4.288887 GGAGAGGGGAAAAGAAAGTAAGGA 59.711 45.833 0.00 0.00 0.00 3.36
6140 6449 4.289934 AGGAGAGGGGAAAAGAAAGTAAGG 59.710 45.833 0.00 0.00 0.00 2.69
6141 6450 5.249420 CAGGAGAGGGGAAAAGAAAGTAAG 58.751 45.833 0.00 0.00 0.00 2.34
6142 6451 4.042934 CCAGGAGAGGGGAAAAGAAAGTAA 59.957 45.833 0.00 0.00 0.00 2.24
6158 6467 4.971282 AGTATGATTCCAATGTCCAGGAGA 59.029 41.667 0.00 0.00 34.91 3.71
6160 6469 4.474651 ACAGTATGATTCCAATGTCCAGGA 59.525 41.667 0.00 0.00 39.69 3.86
6161 6470 4.785301 ACAGTATGATTCCAATGTCCAGG 58.215 43.478 0.00 0.00 39.69 4.45
6349 6660 4.114794 TCTTTTCTGCTTCTTTTGCAAGC 58.885 39.130 0.00 0.00 45.59 4.01
6350 6661 6.038356 TCTTCTTTTCTGCTTCTTTTGCAAG 58.962 36.000 0.00 0.00 40.13 4.01
6351 6662 5.964758 TCTTCTTTTCTGCTTCTTTTGCAA 58.035 33.333 0.00 0.00 40.13 4.08
6352 6663 5.357878 TCTCTTCTTTTCTGCTTCTTTTGCA 59.642 36.000 0.00 0.00 38.81 4.08
6353 6664 5.825507 TCTCTTCTTTTCTGCTTCTTTTGC 58.174 37.500 0.00 0.00 0.00 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.