Multiple sequence alignment - TraesCS5A01G037900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G037900 chr5A 100.000 7581 0 0 1 7581 34987566 34979986 0.000000e+00 13963.0
1 TraesCS5A01G037900 chr5A 84.785 1584 238 2 4813 6396 3086900 3088480 0.000000e+00 1587.0
2 TraesCS5A01G037900 chr5A 81.068 1236 220 10 4799 6028 3132605 3133832 0.000000e+00 974.0
3 TraesCS5A01G037900 chr5A 84.021 194 23 4 4357 4546 696474750 696474939 6.040000e-41 180.0
4 TraesCS5A01G037900 chr5A 76.777 211 29 14 1032 1232 3085694 3085894 4.840000e-17 100.0
5 TraesCS5A01G037900 chr5B 94.244 1963 111 2 4595 6557 44140087 44142047 0.000000e+00 2998.0
6 TraesCS5A01G037900 chr5B 83.770 1602 255 3 4799 6399 862700 861103 0.000000e+00 1513.0
7 TraesCS5A01G037900 chr5B 88.353 1245 73 24 874 2079 44137514 44138725 0.000000e+00 1430.0
8 TraesCS5A01G037900 chr5B 90.512 938 61 18 1782 2700 43959232 43958304 0.000000e+00 1214.0
9 TraesCS5A01G037900 chr5B 87.866 923 53 17 874 1765 43968145 43967251 0.000000e+00 1029.0
10 TraesCS5A01G037900 chr5B 89.771 743 49 9 58 778 43969063 43968326 0.000000e+00 926.0
11 TraesCS5A01G037900 chr5B 89.771 743 49 9 58 778 44136596 44137333 0.000000e+00 926.0
12 TraesCS5A01G037900 chr5B 90.783 575 48 4 1 570 44135598 44136172 0.000000e+00 763.0
13 TraesCS5A01G037900 chr5B 89.901 505 27 12 2068 2560 44139142 44139634 4.990000e-176 628.0
14 TraesCS5A01G037900 chr5B 88.281 384 36 6 6217 6594 43957979 43957599 1.160000e-122 451.0
15 TraesCS5A01G037900 chr5B 85.075 268 14 11 2694 2938 44139678 44139942 4.540000e-62 250.0
16 TraesCS5A01G037900 chr5B 95.161 124 5 1 2919 3042 44139965 44140087 2.160000e-45 195.0
17 TraesCS5A01G037900 chr5B 80.364 275 29 17 2679 2938 43958366 43958102 1.300000e-42 185.0
18 TraesCS5A01G037900 chr5B 91.304 115 7 1 778 892 43968288 43968177 3.660000e-33 154.0
19 TraesCS5A01G037900 chr5B 91.304 115 7 1 778 892 44137371 44137482 3.660000e-33 154.0
20 TraesCS5A01G037900 chr5B 93.548 93 4 2 2922 3014 43958078 43957988 3.690000e-28 137.0
21 TraesCS5A01G037900 chr5B 96.078 51 2 0 1182 1232 865383 865333 4.870000e-12 84.2
22 TraesCS5A01G037900 chr5D 95.489 1840 78 3 4727 6562 44571563 44569725 0.000000e+00 2933.0
23 TraesCS5A01G037900 chr5D 90.018 1693 105 29 1005 2659 44573538 44571872 0.000000e+00 2132.0
24 TraesCS5A01G037900 chr5D 83.903 1609 249 7 4795 6399 6822556 6820954 0.000000e+00 1528.0
25 TraesCS5A01G037900 chr5D 90.815 577 45 6 1 570 44574474 44573899 0.000000e+00 765.0
26 TraesCS5A01G037900 chr5D 84.738 439 41 9 3929 4353 445035320 445034894 4.230000e-112 416.0
27 TraesCS5A01G037900 chr5D 88.477 243 13 7 2705 2938 44571894 44571658 5.790000e-71 279.0
28 TraesCS5A01G037900 chr5D 88.770 187 18 3 3066 3251 445036192 445036008 7.650000e-55 226.0
29 TraesCS5A01G037900 chr5D 80.992 242 27 10 4357 4583 527893343 527893106 2.810000e-39 174.0
30 TraesCS5A01G037900 chr5D 78.571 210 27 15 778 973 44573748 44573543 1.030000e-23 122.0
31 TraesCS5A01G037900 chr5D 96.774 62 1 1 2922 2983 44571632 44571572 1.350000e-17 102.0
32 TraesCS5A01G037900 chr5D 76.216 185 35 9 1054 1232 6823777 6823596 1.050000e-13 89.8
33 TraesCS5A01G037900 chr5D 86.420 81 3 5 4506 4580 66893759 66893837 1.750000e-11 82.4
34 TraesCS5A01G037900 chr5D 92.453 53 4 0 4579 4631 332824217 332824165 8.160000e-10 76.8
35 TraesCS5A01G037900 chrUn 97.376 991 26 0 6591 7581 1640350 1639360 0.000000e+00 1687.0
36 TraesCS5A01G037900 chrUn 97.376 991 26 0 6591 7581 1693775 1692785 0.000000e+00 1687.0
37 TraesCS5A01G037900 chrUn 97.376 991 26 0 6591 7581 358574784 358575774 0.000000e+00 1687.0
38 TraesCS5A01G037900 chrUn 97.275 991 27 0 6591 7581 230596350 230595360 0.000000e+00 1681.0
39 TraesCS5A01G037900 chrUn 97.175 991 28 0 6591 7581 367134551 367135541 0.000000e+00 1676.0
40 TraesCS5A01G037900 chrUn 96.569 991 34 0 6591 7581 334780520 334781510 0.000000e+00 1642.0
41 TraesCS5A01G037900 chrUn 87.866 923 53 17 874 1765 369137536 369136642 0.000000e+00 1029.0
42 TraesCS5A01G037900 chrUn 89.771 743 49 9 58 778 369138454 369137717 0.000000e+00 926.0
43 TraesCS5A01G037900 chrUn 91.304 115 7 1 778 892 369137679 369137568 3.660000e-33 154.0
44 TraesCS5A01G037900 chr1A 97.275 991 27 0 6591 7581 570077652 570076662 0.000000e+00 1681.0
45 TraesCS5A01G037900 chr1A 97.275 991 27 0 6591 7581 570084771 570083781 0.000000e+00 1681.0
46 TraesCS5A01G037900 chr1A 85.246 244 20 5 3925 4154 369366089 369365848 3.540000e-58 237.0
47 TraesCS5A01G037900 chr3A 96.566 990 34 0 6592 7581 713563944 713562955 0.000000e+00 1640.0
48 TraesCS5A01G037900 chr3A 86.747 166 16 3 4352 4515 555347150 555346989 6.040000e-41 180.0
49 TraesCS5A01G037900 chr3A 86.486 148 18 2 166 312 51452859 51453005 2.190000e-35 161.0
50 TraesCS5A01G037900 chr2D 80.989 1678 300 13 4809 6484 15991428 15989768 0.000000e+00 1314.0
51 TraesCS5A01G037900 chr2D 84.633 436 41 9 3935 4356 459521965 459522388 1.970000e-110 411.0
52 TraesCS5A01G037900 chr2D 91.824 159 13 0 3064 3222 459521296 459521454 9.900000e-54 222.0
53 TraesCS5A01G037900 chr2D 88.608 158 17 1 3064 3221 474179453 474179297 2.790000e-44 191.0
54 TraesCS5A01G037900 chr2D 80.658 243 47 0 6143 6385 607839043 607838801 1.000000e-43 189.0
55 TraesCS5A01G037900 chr2D 86.747 166 17 3 4352 4517 268200264 268200424 6.040000e-41 180.0
56 TraesCS5A01G037900 chr2D 85.897 156 14 8 3059 3210 589888231 589888382 7.870000e-35 159.0
57 TraesCS5A01G037900 chr2D 87.273 55 5 1 4579 4631 25921143 25921089 2.280000e-05 62.1
58 TraesCS5A01G037900 chr2A 81.086 1639 296 11 4814 6451 17870929 17869304 0.000000e+00 1297.0
59 TraesCS5A01G037900 chr2A 79.757 247 23 16 4357 4582 448693856 448693616 3.660000e-33 154.0
60 TraesCS5A01G037900 chr2B 80.134 1646 313 11 4814 6458 28175333 28173701 0.000000e+00 1216.0
61 TraesCS5A01G037900 chr2B 89.357 451 23 4 3812 4257 494373141 494373571 1.860000e-150 544.0
62 TraesCS5A01G037900 chr2B 93.671 158 6 2 3500 3654 494372987 494373143 4.570000e-57 233.0
63 TraesCS5A01G037900 chr2B 82.857 245 18 15 4354 4580 772490697 772490459 1.670000e-46 198.0
64 TraesCS5A01G037900 chr2B 85.567 97 13 1 3638 3733 676743705 676743801 4.840000e-17 100.0
65 TraesCS5A01G037900 chr7A 83.874 1141 174 7 5248 6385 47511682 47512815 0.000000e+00 1079.0
66 TraesCS5A01G037900 chr7A 90.741 432 39 1 3922 4353 127263633 127264063 6.600000e-160 575.0
67 TraesCS5A01G037900 chr7A 97.183 142 4 0 3733 3874 107869826 107869967 2.730000e-59 241.0
68 TraesCS5A01G037900 chr7A 93.103 116 6 2 3626 3740 107869428 107869542 1.310000e-37 169.0
69 TraesCS5A01G037900 chr7A 90.588 85 7 1 225 308 651655095 651655011 2.240000e-20 111.0
70 TraesCS5A01G037900 chr7A 91.139 79 6 1 229 306 651651477 651651399 1.040000e-18 106.0
71 TraesCS5A01G037900 chr7A 96.491 57 2 0 1181 1237 47511528 47511584 2.250000e-15 95.3
72 TraesCS5A01G037900 chr7A 85.714 84 10 2 223 304 717239012 717238929 3.770000e-13 87.9
73 TraesCS5A01G037900 chr1D 93.789 483 29 1 3871 4353 394468773 394469254 0.000000e+00 725.0
74 TraesCS5A01G037900 chr1D 93.994 333 10 6 3454 3785 394468412 394468735 5.280000e-136 496.0
75 TraesCS5A01G037900 chr1D 88.235 170 20 0 4184 4353 375211688 375211857 3.590000e-48 204.0
76 TraesCS5A01G037900 chr1D 94.231 52 3 0 1181 1232 71339676 71339727 6.310000e-11 80.5
77 TraesCS5A01G037900 chr6A 94.092 457 26 1 3897 4353 591931128 591931583 0.000000e+00 693.0
78 TraesCS5A01G037900 chr6A 88.953 172 19 0 4184 4355 445060824 445060995 5.960000e-51 213.0
79 TraesCS5A01G037900 chr6A 87.903 124 15 0 3733 3856 579405526 579405649 6.130000e-31 147.0
80 TraesCS5A01G037900 chr6A 86.957 115 13 2 3625 3739 579405129 579405241 2.220000e-25 128.0
81 TraesCS5A01G037900 chr7D 86.325 351 43 2 4009 4355 159902659 159903008 2.000000e-100 377.0
82 TraesCS5A01G037900 chr7D 82.353 340 60 0 6061 6400 45279720 45280059 5.750000e-76 296.0
83 TraesCS5A01G037900 chr7D 98.601 143 2 0 3733 3875 102980427 102980569 3.510000e-63 254.0
84 TraesCS5A01G037900 chr7D 89.017 173 19 0 4184 4356 565431512 565431340 1.660000e-51 215.0
85 TraesCS5A01G037900 chr7D 81.513 238 40 4 88 322 498243075 498243311 7.760000e-45 193.0
86 TraesCS5A01G037900 chr7D 92.241 116 7 2 3626 3740 102980029 102980143 6.090000e-36 163.0
87 TraesCS5A01G037900 chr3B 87.843 255 27 4 3061 3313 598991471 598991723 5.750000e-76 296.0
88 TraesCS5A01G037900 chr3B 93.289 149 9 1 3068 3216 425455653 425455800 1.280000e-52 219.0
89 TraesCS5A01G037900 chr3B 84.716 229 21 9 4360 4582 204168125 204167905 4.610000e-52 217.0
90 TraesCS5A01G037900 chr3B 91.447 152 12 1 3064 3214 739022876 739023027 2.770000e-49 207.0
91 TraesCS5A01G037900 chr3B 81.938 227 27 7 4360 4580 534141066 534140848 6.040000e-41 180.0
92 TraesCS5A01G037900 chr3B 85.185 108 12 3 3139 3242 21146471 21146364 2.890000e-19 108.0
93 TraesCS5A01G037900 chr7B 98.601 143 2 0 3733 3875 61603646 61603788 3.510000e-63 254.0
94 TraesCS5A01G037900 chr7B 92.857 154 10 1 3063 3216 38624673 38624825 9.900000e-54 222.0
95 TraesCS5A01G037900 chr7B 84.127 189 14 5 3456 3628 61603011 61603199 1.310000e-37 169.0
96 TraesCS5A01G037900 chr7B 93.103 116 6 2 3626 3740 61603248 61603362 1.310000e-37 169.0
97 TraesCS5A01G037900 chr7B 90.476 126 11 1 3063 3188 508981552 508981676 1.690000e-36 165.0
98 TraesCS5A01G037900 chr6D 90.811 185 12 4 3066 3246 27095231 27095048 7.600000e-60 243.0
99 TraesCS5A01G037900 chr6D 88.710 124 14 0 3733 3856 433408907 433409030 1.320000e-32 152.0
100 TraesCS5A01G037900 chr6D 88.991 109 12 0 3631 3739 433408514 433408622 1.330000e-27 135.0
101 TraesCS5A01G037900 chr4B 81.818 297 45 9 4061 4353 472005606 472005897 2.730000e-59 241.0
102 TraesCS5A01G037900 chr4B 87.805 164 16 1 4354 4517 149564373 149564532 1.000000e-43 189.0
103 TraesCS5A01G037900 chr3D 83.774 265 32 5 4060 4314 543930892 543930629 2.730000e-59 241.0
104 TraesCS5A01G037900 chr3D 85.882 85 2 6 4505 4585 39903156 39903078 1.750000e-11 82.4
105 TraesCS5A01G037900 chr6B 80.496 282 46 9 4079 4355 40202273 40201996 2.770000e-49 207.0
106 TraesCS5A01G037900 chr6B 87.903 124 15 0 3733 3856 654609436 654609559 6.130000e-31 147.0
107 TraesCS5A01G037900 chr6B 87.826 115 12 2 3625 3739 654609039 654609151 4.770000e-27 134.0
108 TraesCS5A01G037900 chr4A 84.925 199 22 4 4352 4546 735605458 735605264 2.160000e-45 195.0
109 TraesCS5A01G037900 chr4A 76.301 173 34 7 4184 4353 583444124 583444292 1.360000e-12 86.1
110 TraesCS5A01G037900 chr4D 87.349 166 17 1 4352 4517 11163583 11163422 3.610000e-43 187.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G037900 chr5A 34979986 34987566 7580 True 13963.00 13963 100.00000 1 7581 1 chr5A.!!$R1 7580
1 TraesCS5A01G037900 chr5A 3132605 3133832 1227 False 974.00 974 81.06800 4799 6028 1 chr5A.!!$F1 1229
2 TraesCS5A01G037900 chr5A 3085694 3088480 2786 False 843.50 1587 80.78100 1032 6396 2 chr5A.!!$F3 5364
3 TraesCS5A01G037900 chr5B 44135598 44142047 6449 False 918.00 2998 90.57400 1 6557 8 chr5B.!!$F1 6556
4 TraesCS5A01G037900 chr5B 861103 865383 4280 True 798.60 1513 89.92400 1182 6399 2 chr5B.!!$R1 5217
5 TraesCS5A01G037900 chr5B 43967251 43969063 1812 True 703.00 1029 89.64700 58 1765 3 chr5B.!!$R3 1707
6 TraesCS5A01G037900 chr5B 43957599 43959232 1633 True 496.75 1214 88.17625 1782 6594 4 chr5B.!!$R2 4812
7 TraesCS5A01G037900 chr5D 44569725 44574474 4749 True 1055.50 2933 90.02400 1 6562 6 chr5D.!!$R4 6561
8 TraesCS5A01G037900 chr5D 6820954 6823777 2823 True 808.90 1528 80.05950 1054 6399 2 chr5D.!!$R3 5345
9 TraesCS5A01G037900 chr5D 445034894 445036192 1298 True 321.00 416 86.75400 3066 4353 2 chr5D.!!$R5 1287
10 TraesCS5A01G037900 chrUn 1639360 1640350 990 True 1687.00 1687 97.37600 6591 7581 1 chrUn.!!$R1 990
11 TraesCS5A01G037900 chrUn 1692785 1693775 990 True 1687.00 1687 97.37600 6591 7581 1 chrUn.!!$R2 990
12 TraesCS5A01G037900 chrUn 358574784 358575774 990 False 1687.00 1687 97.37600 6591 7581 1 chrUn.!!$F2 990
13 TraesCS5A01G037900 chrUn 230595360 230596350 990 True 1681.00 1681 97.27500 6591 7581 1 chrUn.!!$R3 990
14 TraesCS5A01G037900 chrUn 367134551 367135541 990 False 1676.00 1676 97.17500 6591 7581 1 chrUn.!!$F3 990
15 TraesCS5A01G037900 chrUn 334780520 334781510 990 False 1642.00 1642 96.56900 6591 7581 1 chrUn.!!$F1 990
16 TraesCS5A01G037900 chrUn 369136642 369138454 1812 True 703.00 1029 89.64700 58 1765 3 chrUn.!!$R4 1707
17 TraesCS5A01G037900 chr1A 570076662 570077652 990 True 1681.00 1681 97.27500 6591 7581 1 chr1A.!!$R2 990
18 TraesCS5A01G037900 chr1A 570083781 570084771 990 True 1681.00 1681 97.27500 6591 7581 1 chr1A.!!$R3 990
19 TraesCS5A01G037900 chr3A 713562955 713563944 989 True 1640.00 1640 96.56600 6592 7581 1 chr3A.!!$R2 989
20 TraesCS5A01G037900 chr2D 15989768 15991428 1660 True 1314.00 1314 80.98900 4809 6484 1 chr2D.!!$R1 1675
21 TraesCS5A01G037900 chr2D 459521296 459522388 1092 False 316.50 411 88.22850 3064 4356 2 chr2D.!!$F3 1292
22 TraesCS5A01G037900 chr2A 17869304 17870929 1625 True 1297.00 1297 81.08600 4814 6451 1 chr2A.!!$R1 1637
23 TraesCS5A01G037900 chr2B 28173701 28175333 1632 True 1216.00 1216 80.13400 4814 6458 1 chr2B.!!$R1 1644
24 TraesCS5A01G037900 chr2B 494372987 494373571 584 False 388.50 544 91.51400 3500 4257 2 chr2B.!!$F2 757
25 TraesCS5A01G037900 chr7A 47511528 47512815 1287 False 587.15 1079 90.18250 1181 6385 2 chr7A.!!$F2 5204
26 TraesCS5A01G037900 chr7A 107869428 107869967 539 False 205.00 241 95.14300 3626 3874 2 chr7A.!!$F3 248
27 TraesCS5A01G037900 chr1D 394468412 394469254 842 False 610.50 725 93.89150 3454 4353 2 chr1D.!!$F3 899
28 TraesCS5A01G037900 chr7D 102980029 102980569 540 False 208.50 254 95.42100 3626 3875 2 chr7D.!!$F4 249

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
945 2009 0.105658 TATACGGCCAGCCTCTCCTT 60.106 55.0 2.24 0.00 0.00 3.36 F
2601 5587 0.678395 CATCCTCACAGCGCCTCTAT 59.322 55.0 2.29 0.00 0.00 1.98 F
3290 6538 0.032615 TCCTGCTCTTCCTCTCTCCC 60.033 60.0 0.00 0.00 0.00 4.30 F
3805 7372 0.321387 GGTTCCCCTTCGGTGAGAAC 60.321 60.0 0.00 0.00 36.85 3.01 F
5132 9619 0.108585 GTCAAGGCCCAACTGACTCA 59.891 55.0 14.50 0.00 0.00 3.41 F
5882 10371 0.031716 TCCAGATGCTAGCCCTCACT 60.032 55.0 13.29 1.47 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2724 5791 0.167908 GGTGTGTGTGTGTGTGTGTG 59.832 55.000 0.00 0.00 0.00 3.82 R
4227 8709 0.178533 TTTCGTGTCCGTTTCACCCT 59.821 50.000 0.00 0.00 35.01 4.34 R
4357 8839 0.319040 CTCCCGAGTGCATGATACCG 60.319 60.000 0.00 1.17 0.00 4.02 R
5561 10050 0.034337 TGTACGCCAACTTGGAGACC 59.966 55.000 17.59 8.06 39.92 3.85 R
6396 10885 2.034879 CGTGGGTGTCATCACTGGC 61.035 63.158 7.41 0.00 43.41 4.85 R
7151 11649 0.178958 AGGTGTCGAAGAGGTGGACT 60.179 55.000 0.00 0.00 36.95 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 50 3.340034 TGGCGTCTAAAATGGGTAGTTG 58.660 45.455 0.00 0.00 0.00 3.16
64 1008 9.269453 GGGTAGTTGTGTATCATTATTCCTTAC 57.731 37.037 0.00 0.00 0.00 2.34
119 1074 1.265905 CACCCCTGAAAGTTTACACGC 59.734 52.381 0.00 0.00 0.00 5.34
160 1115 8.902540 TTAAAAGTACTCTCACACATTCATGT 57.097 30.769 0.00 0.00 42.84 3.21
222 1177 7.778470 ACAAGAGATCGAAACAATCTAATCC 57.222 36.000 0.00 0.00 33.64 3.01
455 1412 1.349026 ACAGTGGGTGGATGACTCAAG 59.651 52.381 0.00 0.00 36.55 3.02
462 1419 0.321919 TGGATGACTCAAGTGCAGGC 60.322 55.000 0.00 0.00 0.00 4.85
465 1422 0.959372 ATGACTCAAGTGCAGGCAGC 60.959 55.000 0.00 0.00 45.96 5.25
527 1486 1.076265 GGCCCGGGCTCCTTTATTT 60.076 57.895 42.70 0.00 41.60 1.40
580 1539 4.430137 TCATCTGCACTTTGATTTCTGC 57.570 40.909 0.00 0.00 0.00 4.26
582 1541 1.888512 TCTGCACTTTGATTTCTGCCC 59.111 47.619 0.00 0.00 0.00 5.36
584 1543 0.109132 GCACTTTGATTTCTGCCCGG 60.109 55.000 0.00 0.00 0.00 5.73
589 1548 3.243737 ACTTTGATTTCTGCCCGGTTTTC 60.244 43.478 0.00 0.00 0.00 2.29
590 1549 1.253100 TGATTTCTGCCCGGTTTTCC 58.747 50.000 0.00 0.00 0.00 3.13
607 1566 7.847166 GGTTTTCCGTTAATTAACTGAACAG 57.153 36.000 25.66 11.45 38.52 3.16
700 1668 6.333416 TGCTTCTCACTCACATGTAGAATAC 58.667 40.000 8.15 5.43 43.42 1.89
749 1722 4.629634 GCACAAAAATAATTTAGCGCCCTT 59.370 37.500 2.29 0.00 0.00 3.95
806 1817 1.086696 GCTCATGCCGTTGCTTTCTA 58.913 50.000 0.00 0.00 38.71 2.10
808 1819 2.076100 CTCATGCCGTTGCTTTCTACA 58.924 47.619 0.00 0.00 38.71 2.74
809 1820 2.076100 TCATGCCGTTGCTTTCTACAG 58.924 47.619 0.00 0.00 38.71 2.74
810 1821 1.806542 CATGCCGTTGCTTTCTACAGT 59.193 47.619 0.00 0.00 38.71 3.55
846 1860 0.554792 TACGGTTAGAGAGGGGGAGG 59.445 60.000 0.00 0.00 0.00 4.30
856 1870 2.515853 GAGAGGGGGAGGGAAATTTCAT 59.484 50.000 19.49 7.63 0.00 2.57
863 1877 2.952310 GGAGGGAAATTTCATTCCTCCG 59.048 50.000 29.84 0.00 46.66 4.63
883 1897 3.508762 CGTGTATACGCCTCTTTGTCTT 58.491 45.455 10.76 0.00 44.11 3.01
911 1975 4.471025 TCTCAAAGCAAGATCCCATACTCA 59.529 41.667 0.00 0.00 0.00 3.41
945 2009 0.105658 TATACGGCCAGCCTCTCCTT 60.106 55.000 2.24 0.00 0.00 3.36
994 2071 2.052779 CACACAGCCTGACTCCTCA 58.947 57.895 0.00 0.00 0.00 3.86
996 2073 1.131638 ACACAGCCTGACTCCTCAAA 58.868 50.000 0.00 0.00 0.00 2.69
1000 2077 3.571401 CACAGCCTGACTCCTCAAATTTT 59.429 43.478 0.00 0.00 0.00 1.82
1003 2080 6.599244 CACAGCCTGACTCCTCAAATTTTATA 59.401 38.462 0.00 0.00 0.00 0.98
1016 2093 7.201812 CCTCAAATTTTATATGTGTGCCAGCTA 60.202 37.037 0.00 0.00 0.00 3.32
1061 2144 2.127118 CGCAAACAAGCCTCAGCG 60.127 61.111 0.00 0.00 46.67 5.18
1134 2220 2.273912 GGTCTTGTCGGAGGACGGT 61.274 63.158 0.00 0.00 46.49 4.83
1252 2360 3.916035 TGTCACTACATCCCAGCTATCT 58.084 45.455 0.00 0.00 0.00 1.98
1253 2361 4.290093 TGTCACTACATCCCAGCTATCTT 58.710 43.478 0.00 0.00 0.00 2.40
1254 2362 5.454966 TGTCACTACATCCCAGCTATCTTA 58.545 41.667 0.00 0.00 0.00 2.10
1255 2363 5.536538 TGTCACTACATCCCAGCTATCTTAG 59.463 44.000 0.00 0.00 0.00 2.18
1256 2364 9.300422 TTGTCACTACATCCCAGCTATCTTAGC 62.300 44.444 0.00 0.00 43.00 3.09
1273 2392 5.084519 TCTTAGCTCTGTCTGTTTTCCCTA 58.915 41.667 0.00 0.00 0.00 3.53
1308 2471 3.057174 ACATCTTCTATTCGATCTCCCGC 60.057 47.826 0.00 0.00 0.00 6.13
1309 2472 2.865079 TCTTCTATTCGATCTCCCGCT 58.135 47.619 0.00 0.00 0.00 5.52
1322 2485 2.237143 TCTCCCGCTCTGAATTCATTGT 59.763 45.455 8.96 0.00 0.00 2.71
1362 2525 4.008074 TGTCCTGGATCTCAACAAACTC 57.992 45.455 0.00 0.00 0.00 3.01
1387 2562 3.884895 TCATGCCATCGTAAATGAACCT 58.115 40.909 0.00 0.00 0.00 3.50
1394 2581 6.431543 TGCCATCGTAAATGAACCTAAAAAGA 59.568 34.615 0.00 0.00 0.00 2.52
1424 2611 1.762957 CAAGTAGGGACGGATGGTGAT 59.237 52.381 0.00 0.00 0.00 3.06
1427 2614 2.963782 AGTAGGGACGGATGGTGATAAC 59.036 50.000 0.00 0.00 0.00 1.89
1450 2637 3.500448 TTCAGTTAGTTGCCCACATGA 57.500 42.857 0.00 0.00 0.00 3.07
1458 2647 4.596180 GCCCACATGAATCGCGCG 62.596 66.667 26.76 26.76 0.00 6.86
1459 2648 4.596180 CCCACATGAATCGCGCGC 62.596 66.667 27.95 23.91 0.00 6.86
1461 2650 3.863543 CACATGAATCGCGCGCCA 61.864 61.111 27.95 22.15 0.00 5.69
1462 2651 2.896854 ACATGAATCGCGCGCCAT 60.897 55.556 27.95 23.36 0.00 4.40
1491 2705 3.803082 CCGTGCCGTGCCATTCAG 61.803 66.667 0.00 0.00 0.00 3.02
1492 2706 3.049674 CGTGCCGTGCCATTCAGT 61.050 61.111 0.00 0.00 0.00 3.41
1493 2707 2.616330 CGTGCCGTGCCATTCAGTT 61.616 57.895 0.00 0.00 0.00 3.16
1494 2708 1.295357 CGTGCCGTGCCATTCAGTTA 61.295 55.000 0.00 0.00 0.00 2.24
1648 2922 2.949177 TGTCCATGCCATGTATACCC 57.051 50.000 3.63 0.00 0.00 3.69
1656 2930 1.267121 CCATGTATACCCCCTCCTCG 58.733 60.000 0.00 0.00 0.00 4.63
1665 2939 1.192146 CCCCCTCCTCGTTCTTGACA 61.192 60.000 0.00 0.00 0.00 3.58
1678 2952 4.375698 CGTTCTTGACAACGTAATGCAAAG 59.624 41.667 0.00 0.00 43.41 2.77
2014 4562 2.543641 GCATATTTGAAAGGCACTGGC 58.456 47.619 0.00 0.00 40.86 4.85
2070 5044 7.754851 TTTGTTTCCAAAATACTACTCTCCC 57.245 36.000 0.00 0.00 37.62 4.30
2095 5069 5.046878 ACGACAAGTCACTATCCCAACAATA 60.047 40.000 0.72 0.00 0.00 1.90
2102 5076 9.975218 AAGTCACTATCCCAACAATATTACTTT 57.025 29.630 0.00 0.00 0.00 2.66
2201 5178 6.542821 TCTGAAGAACTTTATGTGGTGGAAT 58.457 36.000 0.00 0.00 0.00 3.01
2221 5198 7.067129 GTGGAATATTACACTTTTCCCCTTCTC 59.933 40.741 21.53 0.00 38.98 2.87
2490 5476 7.064016 CAGATGTCTACAAAGCCTTTTAGTCTC 59.936 40.741 0.00 0.00 0.00 3.36
2507 5493 3.189287 AGTCTCCAAACAATTAGCAAGCG 59.811 43.478 0.00 0.00 0.00 4.68
2511 5497 3.319405 TCCAAACAATTAGCAAGCGGAAA 59.681 39.130 0.00 0.00 0.00 3.13
2537 5523 7.713942 ACCTTTATAGTCAAAGTCGACAAAACT 59.286 33.333 19.50 16.41 38.43 2.66
2601 5587 0.678395 CATCCTCACAGCGCCTCTAT 59.322 55.000 2.29 0.00 0.00 1.98
2691 5758 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2718 5785 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2719 5786 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2720 5787 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2721 5788 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2722 5789 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2723 5790 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2724 5791 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2725 5792 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2726 5793 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2727 5794 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2728 5795 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2729 5796 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2730 5797 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2731 5798 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2732 5799 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2739 5806 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2773 5840 2.035704 TCACAAACGGCTTTGCAATGAT 59.964 40.909 15.97 0.00 40.57 2.45
2837 5940 4.746611 GCCACTTTTTCATTGACTCAAAGG 59.253 41.667 13.10 4.43 0.00 3.11
2880 5987 3.195002 GCCTCACGCATGCGCTAA 61.195 61.111 38.15 22.61 44.19 3.09
2960 6107 5.012871 AGCTAACATCTCATATGCATCCACT 59.987 40.000 0.19 0.00 0.00 4.00
3005 6152 3.351794 TCTGGACTCACTCACGTAGAT 57.648 47.619 0.00 0.00 0.00 1.98
3023 6170 6.818644 ACGTAGATAACTAACTCAACGACCTA 59.181 38.462 0.00 0.00 0.00 3.08
3041 6188 4.809193 ACCTAGCCATCTCAGATCACTAA 58.191 43.478 0.00 0.00 0.00 2.24
3042 6189 4.832266 ACCTAGCCATCTCAGATCACTAAG 59.168 45.833 0.00 0.00 0.00 2.18
3043 6190 4.220382 CCTAGCCATCTCAGATCACTAAGG 59.780 50.000 0.00 0.00 0.00 2.69
3044 6191 2.368221 AGCCATCTCAGATCACTAAGGC 59.632 50.000 3.66 3.66 39.82 4.35
3045 6192 2.368221 GCCATCTCAGATCACTAAGGCT 59.632 50.000 4.51 0.00 36.72 4.58
3046 6193 3.803021 GCCATCTCAGATCACTAAGGCTG 60.803 52.174 4.51 0.00 36.72 4.85
3047 6194 3.244146 CCATCTCAGATCACTAAGGCTGG 60.244 52.174 0.00 0.00 0.00 4.85
3048 6195 1.759445 TCTCAGATCACTAAGGCTGGC 59.241 52.381 0.00 0.00 0.00 4.85
3049 6196 0.833287 TCAGATCACTAAGGCTGGCC 59.167 55.000 3.00 3.00 0.00 5.36
3050 6197 0.543277 CAGATCACTAAGGCTGGCCA 59.457 55.000 14.39 4.71 38.92 5.36
3051 6198 1.142465 CAGATCACTAAGGCTGGCCAT 59.858 52.381 5.51 4.39 38.92 4.40
3052 6199 2.369860 CAGATCACTAAGGCTGGCCATA 59.630 50.000 5.51 5.41 38.92 2.74
3053 6200 2.636893 AGATCACTAAGGCTGGCCATAG 59.363 50.000 18.56 18.56 41.60 2.23
3056 6203 0.839946 ACTAAGGCTGGCCATAGTGG 59.160 55.000 23.13 0.20 45.43 4.00
3057 6204 0.109342 CTAAGGCTGGCCATAGTGGG 59.891 60.000 5.51 0.00 38.19 4.61
3058 6205 1.352622 TAAGGCTGGCCATAGTGGGG 61.353 60.000 5.51 0.00 38.19 4.96
3059 6206 3.420482 GGCTGGCCATAGTGGGGT 61.420 66.667 5.51 0.00 38.19 4.95
3060 6207 2.076184 GGCTGGCCATAGTGGGGTA 61.076 63.158 5.51 0.00 38.19 3.69
3061 6208 1.427072 GGCTGGCCATAGTGGGGTAT 61.427 60.000 5.51 0.00 38.19 2.73
3062 6209 0.036875 GCTGGCCATAGTGGGGTATC 59.963 60.000 5.51 0.00 38.19 2.24
3074 6221 2.241430 GTGGGGTATCTTAGGCCAACTT 59.759 50.000 5.01 0.00 0.00 2.66
3146 6293 0.970427 GGTGGCAATGGGGACGAAAT 60.970 55.000 0.00 0.00 0.00 2.17
3168 6315 3.803082 CATGCGTGTCCGGCTTGG 61.803 66.667 0.00 0.00 40.09 3.61
3210 6357 2.968697 GCGACCCAAAACGTCCGT 60.969 61.111 0.00 0.00 0.00 4.69
3215 6362 2.670592 CCAAAACGTCCGTCCCCC 60.671 66.667 0.00 0.00 0.00 5.40
3218 6365 2.887290 AAAACGTCCGTCCCCCTCC 61.887 63.158 0.00 0.00 0.00 4.30
3283 6531 3.764466 CGCCGTCCTGCTCTTCCT 61.764 66.667 0.00 0.00 0.00 3.36
3284 6532 2.185608 GCCGTCCTGCTCTTCCTC 59.814 66.667 0.00 0.00 0.00 3.71
3285 6533 2.355193 GCCGTCCTGCTCTTCCTCT 61.355 63.158 0.00 0.00 0.00 3.69
3286 6534 1.813192 CCGTCCTGCTCTTCCTCTC 59.187 63.158 0.00 0.00 0.00 3.20
3287 6535 0.682855 CCGTCCTGCTCTTCCTCTCT 60.683 60.000 0.00 0.00 0.00 3.10
3288 6536 0.738389 CGTCCTGCTCTTCCTCTCTC 59.262 60.000 0.00 0.00 0.00 3.20
3289 6537 1.111277 GTCCTGCTCTTCCTCTCTCC 58.889 60.000 0.00 0.00 0.00 3.71
3290 6538 0.032615 TCCTGCTCTTCCTCTCTCCC 60.033 60.000 0.00 0.00 0.00 4.30
3291 6539 1.048160 CCTGCTCTTCCTCTCTCCCC 61.048 65.000 0.00 0.00 0.00 4.81
3292 6540 1.002274 TGCTCTTCCTCTCTCCCCC 59.998 63.158 0.00 0.00 0.00 5.40
3293 6541 2.131067 GCTCTTCCTCTCTCCCCCG 61.131 68.421 0.00 0.00 0.00 5.73
3294 6542 1.615814 CTCTTCCTCTCTCCCCCGA 59.384 63.158 0.00 0.00 0.00 5.14
3295 6543 0.753848 CTCTTCCTCTCTCCCCCGAC 60.754 65.000 0.00 0.00 0.00 4.79
3296 6544 1.758906 CTTCCTCTCTCCCCCGACC 60.759 68.421 0.00 0.00 0.00 4.79
3297 6545 2.516048 CTTCCTCTCTCCCCCGACCA 62.516 65.000 0.00 0.00 0.00 4.02
3298 6546 2.760385 CCTCTCTCCCCCGACCAC 60.760 72.222 0.00 0.00 0.00 4.16
3299 6547 2.760385 CTCTCTCCCCCGACCACC 60.760 72.222 0.00 0.00 0.00 4.61
3300 6548 4.753662 TCTCTCCCCCGACCACCG 62.754 72.222 0.00 0.00 38.18 4.94
3439 6687 4.348495 TCCCGCTCCCCCTTCCTT 62.348 66.667 0.00 0.00 0.00 3.36
3440 6688 3.798511 CCCGCTCCCCCTTCCTTC 61.799 72.222 0.00 0.00 0.00 3.46
3441 6689 3.798511 CCGCTCCCCCTTCCTTCC 61.799 72.222 0.00 0.00 0.00 3.46
3442 6690 3.798511 CGCTCCCCCTTCCTTCCC 61.799 72.222 0.00 0.00 0.00 3.97
3781 7348 2.034053 CAGCATCCTCGAGTTCTACCTC 59.966 54.545 12.31 0.00 0.00 3.85
3795 7362 3.330720 CCTCGGCAGGTTCCCCTT 61.331 66.667 0.00 0.00 39.89 3.95
3796 7363 2.269241 CTCGGCAGGTTCCCCTTC 59.731 66.667 0.00 0.00 39.89 3.46
3797 7364 3.665675 CTCGGCAGGTTCCCCTTCG 62.666 68.421 0.00 0.00 39.89 3.79
3798 7365 4.778143 CGGCAGGTTCCCCTTCGG 62.778 72.222 0.00 0.00 39.89 4.30
3799 7366 3.647771 GGCAGGTTCCCCTTCGGT 61.648 66.667 0.00 0.00 39.89 4.69
3800 7367 2.359975 GCAGGTTCCCCTTCGGTG 60.360 66.667 0.00 0.00 39.89 4.94
3801 7368 2.890766 GCAGGTTCCCCTTCGGTGA 61.891 63.158 0.00 0.00 39.89 4.02
3802 7369 1.296715 CAGGTTCCCCTTCGGTGAG 59.703 63.158 0.00 0.00 39.89 3.51
3803 7370 1.157751 AGGTTCCCCTTCGGTGAGA 59.842 57.895 0.00 0.00 38.13 3.27
3804 7371 0.473117 AGGTTCCCCTTCGGTGAGAA 60.473 55.000 0.00 0.00 38.13 2.87
3805 7372 0.321387 GGTTCCCCTTCGGTGAGAAC 60.321 60.000 0.00 0.00 36.85 3.01
3806 7373 0.321387 GTTCCCCTTCGGTGAGAACC 60.321 60.000 0.00 0.00 34.66 3.62
3807 7374 0.473117 TTCCCCTTCGGTGAGAACCT 60.473 55.000 0.00 0.00 34.66 3.50
4125 8605 1.620822 GTTTCAATGACAGGTGGGCT 58.379 50.000 0.00 0.00 0.00 5.19
4130 8610 0.912486 AATGACAGGTGGGCTAGACC 59.088 55.000 8.06 8.06 37.93 3.85
4150 8630 2.280119 TGTGCAGACGGACACAGC 60.280 61.111 0.00 0.00 41.67 4.40
4157 8637 2.910479 ACGGACACAGCGGACAGA 60.910 61.111 0.00 0.00 0.00 3.41
4173 8655 1.141053 ACAGAAGGGACGCAGAAAACT 59.859 47.619 0.00 0.00 0.00 2.66
4258 8740 2.556806 GACACGAAACGGACGAAAATG 58.443 47.619 0.00 0.00 34.70 2.32
4310 8792 4.337836 GGTTTGTCCGTTTTACCCTAAACA 59.662 41.667 0.00 0.00 37.77 2.83
4314 8796 4.141756 TGTCCGTTTTACCCTAAACAGACA 60.142 41.667 11.96 11.96 45.76 3.41
4324 8806 0.599558 TAAACAGACAGGGACGGACG 59.400 55.000 0.00 0.00 0.00 4.79
4356 8838 1.745489 CCGTGGAGTTGGCCTTAGC 60.745 63.158 3.32 0.00 38.76 3.09
4367 8849 2.544726 GCCTTAGCCGGTATCATGC 58.455 57.895 1.90 0.00 0.00 4.06
4368 8850 0.250295 GCCTTAGCCGGTATCATGCA 60.250 55.000 1.90 0.00 0.00 3.96
4369 8851 1.512926 CCTTAGCCGGTATCATGCAC 58.487 55.000 1.90 0.00 0.00 4.57
4370 8852 1.070758 CCTTAGCCGGTATCATGCACT 59.929 52.381 1.90 0.00 0.00 4.40
4371 8853 2.408050 CTTAGCCGGTATCATGCACTC 58.592 52.381 1.90 0.00 0.00 3.51
4372 8854 0.313987 TAGCCGGTATCATGCACTCG 59.686 55.000 1.90 0.00 0.00 4.18
4373 8855 1.956170 GCCGGTATCATGCACTCGG 60.956 63.158 1.90 15.94 40.33 4.63
4374 8856 1.300931 CCGGTATCATGCACTCGGG 60.301 63.158 14.01 0.00 34.54 5.14
4375 8857 1.739667 CGGTATCATGCACTCGGGA 59.260 57.895 0.00 0.00 0.00 5.14
4376 8858 0.319040 CGGTATCATGCACTCGGGAG 60.319 60.000 0.00 0.00 0.00 4.30
4377 8859 0.753262 GGTATCATGCACTCGGGAGT 59.247 55.000 0.00 0.00 43.61 3.85
4378 8860 1.961394 GGTATCATGCACTCGGGAGTA 59.039 52.381 0.21 0.00 40.20 2.59
4379 8861 2.029828 GGTATCATGCACTCGGGAGTAG 60.030 54.545 0.21 0.00 40.20 2.57
4380 8862 1.781786 ATCATGCACTCGGGAGTAGT 58.218 50.000 0.21 0.00 40.20 2.73
4381 8863 2.430248 TCATGCACTCGGGAGTAGTA 57.570 50.000 0.21 0.00 40.20 1.82
4382 8864 2.730382 TCATGCACTCGGGAGTAGTAA 58.270 47.619 0.21 0.00 40.20 2.24
4383 8865 3.093814 TCATGCACTCGGGAGTAGTAAA 58.906 45.455 0.21 0.00 40.20 2.01
4384 8866 3.119245 TCATGCACTCGGGAGTAGTAAAC 60.119 47.826 0.21 0.00 40.20 2.01
4385 8867 2.241160 TGCACTCGGGAGTAGTAAACA 58.759 47.619 0.21 0.00 40.20 2.83
4386 8868 2.829720 TGCACTCGGGAGTAGTAAACAT 59.170 45.455 0.21 0.00 40.20 2.71
4387 8869 3.187700 GCACTCGGGAGTAGTAAACATG 58.812 50.000 0.21 0.00 40.20 3.21
4388 8870 3.187700 CACTCGGGAGTAGTAAACATGC 58.812 50.000 0.21 0.00 40.20 4.06
4389 8871 3.097614 ACTCGGGAGTAGTAAACATGCT 58.902 45.455 0.00 0.00 40.43 3.79
4390 8872 3.119101 ACTCGGGAGTAGTAAACATGCTG 60.119 47.826 0.00 0.00 40.43 4.41
4391 8873 3.093814 TCGGGAGTAGTAAACATGCTGA 58.906 45.455 0.00 0.00 0.00 4.26
4392 8874 3.704566 TCGGGAGTAGTAAACATGCTGAT 59.295 43.478 0.00 0.00 0.00 2.90
4393 8875 3.804325 CGGGAGTAGTAAACATGCTGATG 59.196 47.826 0.00 0.00 35.49 3.07
4394 8876 4.680708 CGGGAGTAGTAAACATGCTGATGT 60.681 45.833 0.00 0.00 45.24 3.06
4395 8877 4.572389 GGGAGTAGTAAACATGCTGATGTG 59.428 45.833 0.00 0.00 42.30 3.21
4396 8878 4.572389 GGAGTAGTAAACATGCTGATGTGG 59.428 45.833 0.00 0.00 42.30 4.17
4397 8879 3.941483 AGTAGTAAACATGCTGATGTGGC 59.059 43.478 0.00 0.00 42.30 5.01
4398 8880 2.794103 AGTAAACATGCTGATGTGGCA 58.206 42.857 0.00 0.00 42.30 4.92
4399 8881 2.751259 AGTAAACATGCTGATGTGGCAG 59.249 45.455 0.00 0.00 42.30 4.85
4400 8882 1.913778 AAACATGCTGATGTGGCAGA 58.086 45.000 0.00 0.00 42.30 4.26
4401 8883 1.913778 AACATGCTGATGTGGCAGAA 58.086 45.000 0.00 0.00 42.30 3.02
4402 8884 1.913778 ACATGCTGATGTGGCAGAAA 58.086 45.000 0.00 0.00 41.52 2.52
4403 8885 2.241160 ACATGCTGATGTGGCAGAAAA 58.759 42.857 0.00 0.00 41.52 2.29
4404 8886 2.829720 ACATGCTGATGTGGCAGAAAAT 59.170 40.909 0.00 0.00 41.52 1.82
4405 8887 3.259876 ACATGCTGATGTGGCAGAAAATT 59.740 39.130 0.00 0.00 41.52 1.82
4406 8888 4.463539 ACATGCTGATGTGGCAGAAAATTA 59.536 37.500 0.00 0.00 41.52 1.40
4407 8889 5.047164 ACATGCTGATGTGGCAGAAAATTAA 60.047 36.000 0.00 0.00 41.52 1.40
4408 8890 5.465532 TGCTGATGTGGCAGAAAATTAAA 57.534 34.783 0.00 0.00 38.14 1.52
4409 8891 5.472148 TGCTGATGTGGCAGAAAATTAAAG 58.528 37.500 0.00 0.00 38.14 1.85
4410 8892 5.243507 TGCTGATGTGGCAGAAAATTAAAGA 59.756 36.000 0.00 0.00 38.14 2.52
4411 8893 6.158598 GCTGATGTGGCAGAAAATTAAAGAA 58.841 36.000 0.00 0.00 38.14 2.52
4412 8894 6.309737 GCTGATGTGGCAGAAAATTAAAGAAG 59.690 38.462 0.00 0.00 38.14 2.85
4413 8895 7.523293 TGATGTGGCAGAAAATTAAAGAAGA 57.477 32.000 0.00 0.00 0.00 2.87
4414 8896 7.596494 TGATGTGGCAGAAAATTAAAGAAGAG 58.404 34.615 0.00 0.00 0.00 2.85
4415 8897 7.448161 TGATGTGGCAGAAAATTAAAGAAGAGA 59.552 33.333 0.00 0.00 0.00 3.10
4416 8898 7.206981 TGTGGCAGAAAATTAAAGAAGAGAG 57.793 36.000 0.00 0.00 0.00 3.20
4417 8899 6.998074 TGTGGCAGAAAATTAAAGAAGAGAGA 59.002 34.615 0.00 0.00 0.00 3.10
4418 8900 7.173907 TGTGGCAGAAAATTAAAGAAGAGAGAG 59.826 37.037 0.00 0.00 0.00 3.20
4419 8901 7.389053 GTGGCAGAAAATTAAAGAAGAGAGAGA 59.611 37.037 0.00 0.00 0.00 3.10
4420 8902 7.605691 TGGCAGAAAATTAAAGAAGAGAGAGAG 59.394 37.037 0.00 0.00 0.00 3.20
4421 8903 7.065683 GGCAGAAAATTAAAGAAGAGAGAGAGG 59.934 40.741 0.00 0.00 0.00 3.69
4422 8904 7.065683 GCAGAAAATTAAAGAAGAGAGAGAGGG 59.934 40.741 0.00 0.00 0.00 4.30
4423 8905 8.100164 CAGAAAATTAAAGAAGAGAGAGAGGGT 58.900 37.037 0.00 0.00 0.00 4.34
4424 8906 8.664992 AGAAAATTAAAGAAGAGAGAGAGGGTT 58.335 33.333 0.00 0.00 0.00 4.11
4425 8907 9.945904 GAAAATTAAAGAAGAGAGAGAGGGTTA 57.054 33.333 0.00 0.00 0.00 2.85
4426 8908 9.952030 AAAATTAAAGAAGAGAGAGAGGGTTAG 57.048 33.333 0.00 0.00 0.00 2.34
4427 8909 8.903059 AATTAAAGAAGAGAGAGAGGGTTAGA 57.097 34.615 0.00 0.00 0.00 2.10
4428 8910 7.948034 TTAAAGAAGAGAGAGAGGGTTAGAG 57.052 40.000 0.00 0.00 0.00 2.43
4429 8911 5.530176 AAGAAGAGAGAGAGGGTTAGAGT 57.470 43.478 0.00 0.00 0.00 3.24
4430 8912 6.645884 AAGAAGAGAGAGAGGGTTAGAGTA 57.354 41.667 0.00 0.00 0.00 2.59
4431 8913 6.645884 AGAAGAGAGAGAGGGTTAGAGTAA 57.354 41.667 0.00 0.00 0.00 2.24
4432 8914 6.420638 AGAAGAGAGAGAGGGTTAGAGTAAC 58.579 44.000 0.00 0.00 37.94 2.50
4433 8915 5.782677 AGAGAGAGAGGGTTAGAGTAACA 57.217 43.478 0.00 0.00 40.39 2.41
4434 8916 6.335781 AGAGAGAGAGGGTTAGAGTAACAT 57.664 41.667 0.00 0.00 40.39 2.71
4435 8917 7.454553 AGAGAGAGAGGGTTAGAGTAACATA 57.545 40.000 0.00 0.00 40.39 2.29
4436 8918 8.052621 AGAGAGAGAGGGTTAGAGTAACATAT 57.947 38.462 0.00 0.00 40.39 1.78
4437 8919 9.173231 AGAGAGAGAGGGTTAGAGTAACATATA 57.827 37.037 0.00 0.00 40.39 0.86
4438 8920 9.969001 GAGAGAGAGGGTTAGAGTAACATATAT 57.031 37.037 0.00 0.00 40.39 0.86
4442 8924 9.978336 GAGAGGGTTAGAGTAACATATATAGGT 57.022 37.037 0.00 0.00 40.39 3.08
4486 8968 9.884636 AAATACTATACTACTTTGTGTCATGCA 57.115 29.630 0.00 0.00 0.00 3.96
4487 8969 9.534565 AATACTATACTACTTTGTGTCATGCAG 57.465 33.333 0.00 0.00 0.00 4.41
4488 8970 6.341316 ACTATACTACTTTGTGTCATGCAGG 58.659 40.000 0.00 0.00 0.00 4.85
4489 8971 3.492102 ACTACTTTGTGTCATGCAGGT 57.508 42.857 0.00 0.00 0.00 4.00
4490 8972 3.403038 ACTACTTTGTGTCATGCAGGTC 58.597 45.455 0.00 0.00 0.00 3.85
4491 8973 1.609208 ACTTTGTGTCATGCAGGTCC 58.391 50.000 0.00 0.00 0.00 4.46
4492 8974 1.133823 ACTTTGTGTCATGCAGGTCCA 60.134 47.619 0.00 0.00 0.00 4.02
4493 8975 2.165167 CTTTGTGTCATGCAGGTCCAT 58.835 47.619 0.00 0.00 0.00 3.41
4494 8976 1.825090 TTGTGTCATGCAGGTCCATC 58.175 50.000 0.00 0.00 0.00 3.51
4495 8977 0.691904 TGTGTCATGCAGGTCCATCA 59.308 50.000 0.00 0.00 0.00 3.07
4496 8978 1.073603 TGTGTCATGCAGGTCCATCAA 59.926 47.619 0.00 0.00 0.00 2.57
4497 8979 2.291089 TGTGTCATGCAGGTCCATCAAT 60.291 45.455 0.00 0.00 0.00 2.57
4498 8980 3.054508 TGTGTCATGCAGGTCCATCAATA 60.055 43.478 0.00 0.00 0.00 1.90
4499 8981 3.947196 GTGTCATGCAGGTCCATCAATAA 59.053 43.478 0.00 0.00 0.00 1.40
4500 8982 4.036027 GTGTCATGCAGGTCCATCAATAAG 59.964 45.833 0.00 0.00 0.00 1.73
4501 8983 4.080413 TGTCATGCAGGTCCATCAATAAGA 60.080 41.667 0.00 0.00 0.00 2.10
4502 8984 5.068636 GTCATGCAGGTCCATCAATAAGAT 58.931 41.667 0.00 0.00 37.48 2.40
4503 8985 5.180868 GTCATGCAGGTCCATCAATAAGATC 59.819 44.000 0.00 0.00 33.72 2.75
4504 8986 4.776435 TGCAGGTCCATCAATAAGATCA 57.224 40.909 0.00 0.00 33.72 2.92
4505 8987 5.314718 TGCAGGTCCATCAATAAGATCAT 57.685 39.130 0.00 0.00 33.72 2.45
4506 8988 5.311265 TGCAGGTCCATCAATAAGATCATC 58.689 41.667 0.00 0.00 33.72 2.92
4507 8989 5.072736 TGCAGGTCCATCAATAAGATCATCT 59.927 40.000 0.00 0.00 33.72 2.90
4508 8990 6.270695 TGCAGGTCCATCAATAAGATCATCTA 59.729 38.462 0.00 0.00 33.72 1.98
4509 8991 7.037802 TGCAGGTCCATCAATAAGATCATCTAT 60.038 37.037 0.00 0.00 33.72 1.98
4510 8992 7.280428 GCAGGTCCATCAATAAGATCATCTATG 59.720 40.741 0.00 0.00 33.72 2.23
4511 8993 8.537858 CAGGTCCATCAATAAGATCATCTATGA 58.462 37.037 0.00 0.00 41.70 2.15
4539 9021 9.535170 ACTATGCATTAGGTAGTATCATACACT 57.465 33.333 3.54 0.00 31.68 3.55
4542 9024 8.935614 TGCATTAGGTAGTATCATACACTAGT 57.064 34.615 0.00 0.00 0.00 2.57
4577 9059 4.408276 TGATACTCCCCACTATGAGTAGC 58.592 47.826 7.72 7.72 45.86 3.58
4578 9060 2.089600 ACTCCCCACTATGAGTAGCC 57.910 55.000 0.00 0.00 39.96 3.93
4579 9061 1.576272 ACTCCCCACTATGAGTAGCCT 59.424 52.381 0.00 0.00 39.96 4.58
4580 9062 2.789992 ACTCCCCACTATGAGTAGCCTA 59.210 50.000 0.00 0.00 39.96 3.93
4581 9063 3.206866 ACTCCCCACTATGAGTAGCCTAA 59.793 47.826 0.00 0.00 39.96 2.69
4582 9064 3.573695 TCCCCACTATGAGTAGCCTAAC 58.426 50.000 0.00 0.00 0.00 2.34
4583 9065 3.052414 TCCCCACTATGAGTAGCCTAACA 60.052 47.826 0.00 0.00 0.00 2.41
4584 9066 3.904339 CCCCACTATGAGTAGCCTAACAT 59.096 47.826 0.00 0.00 0.00 2.71
4585 9067 4.262635 CCCCACTATGAGTAGCCTAACATG 60.263 50.000 0.00 0.00 0.00 3.21
4586 9068 4.310769 CCACTATGAGTAGCCTAACATGC 58.689 47.826 0.00 0.00 0.00 4.06
4587 9069 4.202253 CCACTATGAGTAGCCTAACATGCA 60.202 45.833 0.00 0.00 0.00 3.96
4588 9070 5.359756 CACTATGAGTAGCCTAACATGCAA 58.640 41.667 0.00 0.00 0.00 4.08
4589 9071 5.235186 CACTATGAGTAGCCTAACATGCAAC 59.765 44.000 0.00 0.00 0.00 4.17
4590 9072 2.616960 TGAGTAGCCTAACATGCAACG 58.383 47.619 0.00 0.00 0.00 4.10
4591 9073 1.327764 GAGTAGCCTAACATGCAACGC 59.672 52.381 0.00 0.00 0.00 4.84
4592 9074 1.083489 GTAGCCTAACATGCAACGCA 58.917 50.000 0.00 0.00 44.86 5.24
4593 9075 1.083489 TAGCCTAACATGCAACGCAC 58.917 50.000 0.00 0.00 43.04 5.34
4658 9140 3.944015 GACATGCTTCTCTAAATGGCAGT 59.056 43.478 0.00 0.00 36.35 4.40
4713 9195 9.751542 TTTTCAAATTTAATTTTGGAGTAGCGA 57.248 25.926 18.10 0.00 37.23 4.93
4714 9196 8.964420 TTCAAATTTAATTTTGGAGTAGCGAG 57.036 30.769 18.10 0.00 37.23 5.03
4715 9197 8.106247 TCAAATTTAATTTTGGAGTAGCGAGT 57.894 30.769 18.10 0.00 37.23 4.18
4716 9198 9.221933 TCAAATTTAATTTTGGAGTAGCGAGTA 57.778 29.630 18.10 0.00 37.23 2.59
4762 9245 7.071950 TGAATTACCTACCAAGCCAGTGTATAT 59.928 37.037 0.00 0.00 0.00 0.86
4943 9430 1.194781 ATGTCTTCTCCGGCACCAGT 61.195 55.000 0.00 0.00 0.00 4.00
5084 9571 2.122729 CACTCCCTCCACCCTCCA 59.877 66.667 0.00 0.00 0.00 3.86
5090 9577 2.516888 CCTCCACCCTCCAACGTGT 61.517 63.158 0.00 0.00 0.00 4.49
5132 9619 0.108585 GTCAAGGCCCAACTGACTCA 59.891 55.000 14.50 0.00 0.00 3.41
5135 9622 0.550914 AAGGCCCAACTGACTCACAA 59.449 50.000 0.00 0.00 0.00 3.33
5444 9931 2.662527 GTTCGTGTTCGGCCCGAA 60.663 61.111 15.93 15.93 43.75 4.30
5491 9980 3.753434 CCTCGTCGCTGCCACTCT 61.753 66.667 0.00 0.00 0.00 3.24
5546 10035 2.342648 GAGTTGTTCGACCCGCCT 59.657 61.111 0.00 0.00 0.00 5.52
5561 10050 2.039405 GCCTCACAGGAGCAAGCTG 61.039 63.158 0.00 0.00 37.67 4.24
5882 10371 0.031716 TCCAGATGCTAGCCCTCACT 60.032 55.000 13.29 1.47 0.00 3.41
6069 10558 2.971330 TCATTGATGCCTTGGTTTTGGT 59.029 40.909 0.00 0.00 0.00 3.67
6396 10885 4.154195 CGAGGTGGTACAAATTCAAGAAGG 59.846 45.833 0.00 0.00 44.16 3.46
6408 10897 1.699083 TCAAGAAGGCCAGTGATGACA 59.301 47.619 5.01 0.00 0.00 3.58
6425 10914 4.015406 ACCCACGCCAGCGATGAA 62.015 61.111 20.32 0.00 42.83 2.57
6454 10943 1.614317 CGATGAAAGCCCCAAGAAGGT 60.614 52.381 0.00 0.00 34.66 3.50
6458 10947 1.121407 AAAGCCCCAAGAAGGTTGCC 61.121 55.000 0.00 0.00 34.65 4.52
6460 10949 2.278330 GCCCCAAGAAGGTTGCCAG 61.278 63.158 0.00 0.00 34.66 4.85
6472 10961 2.093181 AGGTTGCCAGTAATATGACGCA 60.093 45.455 0.00 0.00 0.00 5.24
6489 10978 3.000727 ACGCAGGTTTAGATTAGTGCAC 58.999 45.455 9.40 9.40 0.00 4.57
6534 11025 9.452065 GTATACTCGTATGCATGTATAGATTGG 57.548 37.037 10.16 0.00 31.22 3.16
6568 11066 7.375834 TGGAAAGGTATATGTGTATGATCGAC 58.624 38.462 0.00 0.00 0.00 4.20
6569 11067 7.232737 TGGAAAGGTATATGTGTATGATCGACT 59.767 37.037 0.00 0.00 0.00 4.18
6570 11068 7.542477 GGAAAGGTATATGTGTATGATCGACTG 59.458 40.741 0.00 0.00 0.00 3.51
6571 11069 7.761038 AAGGTATATGTGTATGATCGACTGA 57.239 36.000 0.00 0.00 0.00 3.41
6587 11085 5.836347 TCGACTGATCATTGATCTTAGTGG 58.164 41.667 23.49 19.56 39.56 4.00
6676 11174 8.147244 ACAACCTGTACTTATCCTCTGTAAAT 57.853 34.615 0.00 0.00 0.00 1.40
6716 11214 5.361285 AGAGGCGTCCTATATAATGATCACC 59.639 44.000 0.00 0.00 31.76 4.02
6908 11406 0.178873 TTCCCCAACCCTCTGCTAGT 60.179 55.000 0.00 0.00 0.00 2.57
7176 11674 1.533469 CCTCTTCGACACCTCCCGTT 61.533 60.000 0.00 0.00 0.00 4.44
7206 11704 1.103803 GCACCTCGAGGAGATGTACA 58.896 55.000 37.69 0.00 38.94 2.90
7476 11974 0.467384 CCATGCCATCTCCTTCGAGT 59.533 55.000 0.00 0.00 37.40 4.18
7520 12018 2.972021 TCATCTTCAACTCCACACAGGA 59.028 45.455 0.00 0.00 46.75 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 29 3.749609 ACACAACTACCCATTTTAGACGC 59.250 43.478 0.00 0.00 0.00 5.19
106 1061 6.296365 ACTTTAAGAGGCGTGTAAACTTTC 57.704 37.500 0.00 0.00 0.00 2.62
178 1133 9.784680 CTCTTGTTTGATCCATTGAGAAAATAG 57.215 33.333 0.00 0.00 0.00 1.73
349 1304 5.219633 GGGCGTAGGTGCAATTAATTAATG 58.780 41.667 11.42 7.23 36.28 1.90
465 1422 3.414700 GGTGAAGCGCCTGTCGTG 61.415 66.667 2.29 0.00 41.07 4.35
470 1427 1.269723 TCTATATCGGTGAAGCGCCTG 59.730 52.381 2.29 0.00 0.00 4.85
473 1432 2.417339 TGTCTATATCGGTGAAGCGC 57.583 50.000 0.00 0.00 0.00 5.92
527 1486 4.559862 AATTGAAACCAAACCAACCACA 57.440 36.364 0.00 0.00 0.00 4.17
573 1532 0.538746 ACGGAAAACCGGGCAGAAAT 60.539 50.000 6.32 0.00 37.53 2.17
578 1537 1.618487 AATTAACGGAAAACCGGGCA 58.382 45.000 6.32 0.00 37.53 5.36
580 1539 4.455190 TCAGTTAATTAACGGAAAACCGGG 59.545 41.667 23.39 0.00 40.96 5.73
582 1541 6.428799 TGTTCAGTTAATTAACGGAAAACCG 58.571 36.000 31.88 13.18 46.40 4.44
584 1543 8.845942 AACTGTTCAGTTAATTAACGGAAAAC 57.154 30.769 31.88 25.02 46.40 2.43
589 1548 9.166126 GAAAAGAACTGTTCAGTTAATTAACGG 57.834 33.333 21.50 19.40 40.96 4.44
590 1549 9.931210 AGAAAAGAACTGTTCAGTTAATTAACG 57.069 29.630 21.50 15.31 40.96 3.18
727 1700 7.820044 TTAAGGGCGCTAAATTATTTTTGTG 57.180 32.000 7.64 0.00 33.19 3.33
749 1722 3.630168 TGCAGCTGGAGGCAAATAATTA 58.370 40.909 17.12 0.00 44.79 1.40
846 1860 6.292703 CGTATACACGGAGGAATGAAATTTCC 60.293 42.308 15.48 0.50 44.59 3.13
863 1877 5.169295 AGAAAGACAAAGAGGCGTATACAC 58.831 41.667 3.32 0.00 0.00 2.90
877 1891 5.674525 TCTTGCTTTGAGAGAGAAAGACAA 58.325 37.500 0.00 0.00 33.01 3.18
879 1893 5.351189 GGATCTTGCTTTGAGAGAGAAAGAC 59.649 44.000 0.00 0.00 33.01 3.01
883 1897 3.584406 TGGGATCTTGCTTTGAGAGAGAA 59.416 43.478 0.00 0.00 0.00 2.87
935 1999 1.194218 GAAGCAGAGAAGGAGAGGCT 58.806 55.000 0.00 0.00 0.00 4.58
981 2045 7.284034 CACATATAAAATTTGAGGAGTCAGGCT 59.716 37.037 0.00 0.00 32.98 4.58
994 2071 7.645058 AGTAGCTGGCACACATATAAAATTT 57.355 32.000 0.00 0.00 0.00 1.82
996 2073 6.039717 CCAAGTAGCTGGCACACATATAAAAT 59.960 38.462 0.00 0.00 0.00 1.82
1000 2077 3.454447 ACCAAGTAGCTGGCACACATATA 59.546 43.478 0.00 0.00 40.45 0.86
1003 2080 0.401738 ACCAAGTAGCTGGCACACAT 59.598 50.000 0.00 0.00 40.45 3.21
1016 2093 0.764890 TCACTAGGCAAGCACCAAGT 59.235 50.000 0.00 0.00 0.00 3.16
1064 2147 2.181445 CTTCTGCTCCTCCTGCTGCA 62.181 60.000 0.88 0.88 0.00 4.41
1069 2152 1.633915 ATGGGCTTCTGCTCCTCCTG 61.634 60.000 0.00 0.00 39.40 3.86
1252 2360 4.591498 TGTAGGGAAAACAGACAGAGCTAA 59.409 41.667 0.00 0.00 0.00 3.09
1253 2361 4.157246 TGTAGGGAAAACAGACAGAGCTA 58.843 43.478 0.00 0.00 0.00 3.32
1254 2362 2.972713 TGTAGGGAAAACAGACAGAGCT 59.027 45.455 0.00 0.00 0.00 4.09
1255 2363 3.402628 TGTAGGGAAAACAGACAGAGC 57.597 47.619 0.00 0.00 0.00 4.09
1256 2364 3.686726 GCATGTAGGGAAAACAGACAGAG 59.313 47.826 0.00 0.00 0.00 3.35
1257 2365 3.072330 TGCATGTAGGGAAAACAGACAGA 59.928 43.478 0.00 0.00 0.00 3.41
1258 2366 3.189287 GTGCATGTAGGGAAAACAGACAG 59.811 47.826 0.00 0.00 0.00 3.51
1259 2367 3.146066 GTGCATGTAGGGAAAACAGACA 58.854 45.455 0.00 0.00 0.00 3.41
1260 2368 3.146066 TGTGCATGTAGGGAAAACAGAC 58.854 45.455 0.00 0.00 0.00 3.51
1261 2369 3.500448 TGTGCATGTAGGGAAAACAGA 57.500 42.857 0.00 0.00 0.00 3.41
1262 2370 4.100707 CATGTGCATGTAGGGAAAACAG 57.899 45.455 4.13 0.00 34.23 3.16
1308 2471 6.939132 ATAGGAGCAACAATGAATTCAGAG 57.061 37.500 14.54 10.88 0.00 3.35
1309 2472 6.660521 ACAATAGGAGCAACAATGAATTCAGA 59.339 34.615 14.54 0.00 0.00 3.27
1322 2485 5.833131 AGGACAAGAAAAACAATAGGAGCAA 59.167 36.000 0.00 0.00 0.00 3.91
1362 2525 4.880886 TCATTTACGATGGCATGAACAG 57.119 40.909 3.81 0.00 0.00 3.16
1387 2562 3.537580 ACTTGTCCTGCACGTCTTTTTA 58.462 40.909 0.00 0.00 0.00 1.52
1394 2581 0.830444 TCCCTACTTGTCCTGCACGT 60.830 55.000 0.00 0.00 33.89 4.49
1424 2611 5.133941 TGTGGGCAACTAACTGAATTGTTA 58.866 37.500 0.00 0.00 0.00 2.41
1427 2614 4.218200 TCATGTGGGCAACTAACTGAATTG 59.782 41.667 0.00 0.00 0.00 2.32
1488 2702 7.441458 GCAAAGAGAAAGAGGTAAACTAACTGA 59.559 37.037 0.00 0.00 0.00 3.41
1489 2703 7.569591 CGCAAAGAGAAAGAGGTAAACTAACTG 60.570 40.741 0.00 0.00 0.00 3.16
1490 2704 6.424207 CGCAAAGAGAAAGAGGTAAACTAACT 59.576 38.462 0.00 0.00 0.00 2.24
1491 2705 6.202379 ACGCAAAGAGAAAGAGGTAAACTAAC 59.798 38.462 0.00 0.00 0.00 2.34
1492 2706 6.285990 ACGCAAAGAGAAAGAGGTAAACTAA 58.714 36.000 0.00 0.00 0.00 2.24
1493 2707 5.850614 ACGCAAAGAGAAAGAGGTAAACTA 58.149 37.500 0.00 0.00 0.00 2.24
1494 2708 4.704965 ACGCAAAGAGAAAGAGGTAAACT 58.295 39.130 0.00 0.00 0.00 2.66
1647 2921 0.685097 TTGTCAAGAACGAGGAGGGG 59.315 55.000 0.00 0.00 0.00 4.79
1648 2922 1.797025 GTTGTCAAGAACGAGGAGGG 58.203 55.000 0.00 0.00 0.00 4.30
1656 2930 5.270853 ACTTTGCATTACGTTGTCAAGAAC 58.729 37.500 0.00 0.00 0.00 3.01
1665 2939 4.390909 GGCTACAGTACTTTGCATTACGTT 59.609 41.667 0.00 0.00 0.00 3.99
1669 2943 3.521937 AGGGGCTACAGTACTTTGCATTA 59.478 43.478 11.89 0.00 0.00 1.90
1678 2952 5.417754 AGAAAAACTAGGGGCTACAGTAC 57.582 43.478 0.00 0.00 0.00 2.73
1868 4357 5.048713 AGCTACAGTAAAAGGCAAATGTGTC 60.049 40.000 0.00 0.00 0.00 3.67
1919 4463 3.068560 TGGGTTCTACATGTGCGTAAAC 58.931 45.455 9.11 5.49 0.00 2.01
2014 4562 7.682787 ATTTCAGTATATAGGGGCATAGAGG 57.317 40.000 0.00 0.00 0.00 3.69
2018 4566 8.126385 TCACCTATTTCAGTATATAGGGGCATA 58.874 37.037 11.63 0.00 44.28 3.14
2070 5044 2.993899 GTTGGGATAGTGACTTGTCGTG 59.006 50.000 0.00 0.00 0.00 4.35
2102 5076 6.647334 TTGCACAAGATAAACAAGGAATGA 57.353 33.333 0.00 0.00 0.00 2.57
2135 5110 3.372822 CACATGAAAGATGCAATTTGCCC 59.627 43.478 18.27 10.29 44.23 5.36
2147 5122 3.576982 AGGTTCGACTACCACATGAAAGA 59.423 43.478 8.93 0.00 40.82 2.52
2148 5123 3.926616 AGGTTCGACTACCACATGAAAG 58.073 45.455 8.93 0.00 40.82 2.62
2201 5178 5.105064 CCGAGAGAAGGGGAAAAGTGTAATA 60.105 44.000 0.00 0.00 0.00 0.98
2221 5198 0.965363 CCCAAAATCACCACCCCGAG 60.965 60.000 0.00 0.00 0.00 4.63
2273 5250 9.965902 ATAGATAAACTGATACAATCCCATTCC 57.034 33.333 0.00 0.00 0.00 3.01
2277 5254 9.607333 AGAGATAGATAAACTGATACAATCCCA 57.393 33.333 0.00 0.00 0.00 4.37
2418 5404 9.818796 GACTCTGACTAAAAATCTTTGATTGAC 57.181 33.333 0.00 0.00 0.00 3.18
2481 5467 7.145323 GCTTGCTAATTGTTTGGAGACTAAAA 58.855 34.615 0.00 0.00 0.00 1.52
2490 5476 3.296322 TTCCGCTTGCTAATTGTTTGG 57.704 42.857 0.00 0.00 0.00 3.28
2507 5493 6.647895 TGTCGACTTTGACTATAAAGGTTTCC 59.352 38.462 17.92 0.00 40.98 3.13
2511 5497 7.713942 AGTTTTGTCGACTTTGACTATAAAGGT 59.286 33.333 17.92 0.00 40.98 3.50
2540 5526 7.038048 TGCATCAAGTTACAAACAAATGTCAA 58.962 30.769 0.00 0.00 34.75 3.18
2601 5587 7.453126 ACAAGAGATAGTTGAGAGAGGAAGAAA 59.547 37.037 0.00 0.00 0.00 2.52
2691 5758 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2718 5785 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2719 5786 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2720 5787 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2721 5788 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2722 5789 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2723 5790 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2724 5791 0.167908 GGTGTGTGTGTGTGTGTGTG 59.832 55.000 0.00 0.00 0.00 3.82
2725 5792 0.250510 TGGTGTGTGTGTGTGTGTGT 60.251 50.000 0.00 0.00 0.00 3.72
2726 5793 0.877743 TTGGTGTGTGTGTGTGTGTG 59.122 50.000 0.00 0.00 0.00 3.82
2727 5794 1.164411 CTTGGTGTGTGTGTGTGTGT 58.836 50.000 0.00 0.00 0.00 3.72
2728 5795 0.451383 CCTTGGTGTGTGTGTGTGTG 59.549 55.000 0.00 0.00 0.00 3.82
2729 5796 0.326595 TCCTTGGTGTGTGTGTGTGT 59.673 50.000 0.00 0.00 0.00 3.72
2730 5797 1.401552 CTTCCTTGGTGTGTGTGTGTG 59.598 52.381 0.00 0.00 0.00 3.82
2731 5798 1.280710 TCTTCCTTGGTGTGTGTGTGT 59.719 47.619 0.00 0.00 0.00 3.72
2732 5799 2.036958 TCTTCCTTGGTGTGTGTGTG 57.963 50.000 0.00 0.00 0.00 3.82
2739 5806 2.878406 CGTTTGTGATCTTCCTTGGTGT 59.122 45.455 0.00 0.00 0.00 4.16
2773 5840 1.792757 ATGGAGCCAAGGAAGGTGCA 61.793 55.000 0.00 0.00 37.47 4.57
2880 5987 3.031417 GCCGAGTATGGTGGCTGGT 62.031 63.158 0.00 0.00 45.40 4.00
3005 6152 4.081406 TGGCTAGGTCGTTGAGTTAGTTA 58.919 43.478 0.00 0.00 0.00 2.24
3023 6170 2.368221 GCCTTAGTGATCTGAGATGGCT 59.632 50.000 10.86 6.35 30.13 4.75
3041 6188 2.561378 TACCCCACTATGGCCAGCCT 62.561 60.000 13.05 0.00 35.79 4.58
3042 6189 1.427072 ATACCCCACTATGGCCAGCC 61.427 60.000 13.05 0.38 35.79 4.85
3043 6190 0.036875 GATACCCCACTATGGCCAGC 59.963 60.000 13.05 0.00 35.79 4.85
3044 6191 1.734655 AGATACCCCACTATGGCCAG 58.265 55.000 13.05 0.00 35.79 4.85
3045 6192 2.206322 AAGATACCCCACTATGGCCA 57.794 50.000 8.56 8.56 35.79 5.36
3046 6193 2.572104 CCTAAGATACCCCACTATGGCC 59.428 54.545 0.00 0.00 35.79 5.36
3047 6194 2.027100 GCCTAAGATACCCCACTATGGC 60.027 54.545 0.00 0.00 35.79 4.40
3048 6195 2.572104 GGCCTAAGATACCCCACTATGG 59.428 54.545 0.00 0.00 37.25 2.74
3049 6196 3.248024 TGGCCTAAGATACCCCACTATG 58.752 50.000 3.32 0.00 0.00 2.23
3050 6197 3.648683 TGGCCTAAGATACCCCACTAT 57.351 47.619 3.32 0.00 0.00 2.12
3051 6198 3.043418 GTTGGCCTAAGATACCCCACTA 58.957 50.000 3.32 0.00 0.00 2.74
3052 6199 1.844497 GTTGGCCTAAGATACCCCACT 59.156 52.381 3.32 0.00 0.00 4.00
3053 6200 1.844497 AGTTGGCCTAAGATACCCCAC 59.156 52.381 3.32 0.00 0.00 4.61
3054 6201 2.280308 AGTTGGCCTAAGATACCCCA 57.720 50.000 3.32 0.00 0.00 4.96
3055 6202 2.508300 TGAAGTTGGCCTAAGATACCCC 59.492 50.000 3.32 0.00 0.00 4.95
3056 6203 3.542648 GTGAAGTTGGCCTAAGATACCC 58.457 50.000 3.32 0.00 0.00 3.69
3057 6204 3.542648 GGTGAAGTTGGCCTAAGATACC 58.457 50.000 3.32 2.46 0.00 2.73
3058 6205 3.195661 CGGTGAAGTTGGCCTAAGATAC 58.804 50.000 3.32 0.00 0.00 2.24
3059 6206 2.419574 GCGGTGAAGTTGGCCTAAGATA 60.420 50.000 3.32 0.00 0.00 1.98
3060 6207 1.679032 GCGGTGAAGTTGGCCTAAGAT 60.679 52.381 3.32 0.00 0.00 2.40
3061 6208 0.321298 GCGGTGAAGTTGGCCTAAGA 60.321 55.000 3.32 0.00 0.00 2.10
3062 6209 0.605319 TGCGGTGAAGTTGGCCTAAG 60.605 55.000 3.32 0.00 0.00 2.18
3074 6221 3.862991 TTTGGGGTCGTGCGGTGA 61.863 61.111 0.00 0.00 0.00 4.02
3189 6336 1.289800 GGACGTTTTGGGTCGCTCTC 61.290 60.000 0.00 0.00 35.24 3.20
3215 6362 3.486252 GACGAGATTCCGCGGGGAG 62.486 68.421 27.83 11.96 44.98 4.30
3266 6514 3.708220 GAGGAAGAGCAGGACGGCG 62.708 68.421 4.80 4.80 39.27 6.46
3267 6515 2.185608 GAGGAAGAGCAGGACGGC 59.814 66.667 0.00 0.00 0.00 5.68
3268 6516 0.682855 AGAGAGGAAGAGCAGGACGG 60.683 60.000 0.00 0.00 0.00 4.79
3269 6517 0.738389 GAGAGAGGAAGAGCAGGACG 59.262 60.000 0.00 0.00 0.00 4.79
3270 6518 1.111277 GGAGAGAGGAAGAGCAGGAC 58.889 60.000 0.00 0.00 0.00 3.85
3271 6519 0.032615 GGGAGAGAGGAAGAGCAGGA 60.033 60.000 0.00 0.00 0.00 3.86
3272 6520 1.048160 GGGGAGAGAGGAAGAGCAGG 61.048 65.000 0.00 0.00 0.00 4.85
3273 6521 1.048160 GGGGGAGAGAGGAAGAGCAG 61.048 65.000 0.00 0.00 0.00 4.24
3274 6522 1.002274 GGGGGAGAGAGGAAGAGCA 59.998 63.158 0.00 0.00 0.00 4.26
3275 6523 2.131067 CGGGGGAGAGAGGAAGAGC 61.131 68.421 0.00 0.00 0.00 4.09
3276 6524 0.753848 GTCGGGGGAGAGAGGAAGAG 60.754 65.000 0.00 0.00 0.00 2.85
3277 6525 1.306970 GTCGGGGGAGAGAGGAAGA 59.693 63.158 0.00 0.00 0.00 2.87
3278 6526 1.758906 GGTCGGGGGAGAGAGGAAG 60.759 68.421 0.00 0.00 0.00 3.46
3279 6527 2.363361 GGTCGGGGGAGAGAGGAA 59.637 66.667 0.00 0.00 0.00 3.36
3280 6528 2.944954 TGGTCGGGGGAGAGAGGA 60.945 66.667 0.00 0.00 0.00 3.71
3281 6529 2.760385 GTGGTCGGGGGAGAGAGG 60.760 72.222 0.00 0.00 0.00 3.69
3282 6530 2.760385 GGTGGTCGGGGGAGAGAG 60.760 72.222 0.00 0.00 0.00 3.20
3283 6531 4.753662 CGGTGGTCGGGGGAGAGA 62.754 72.222 0.00 0.00 34.75 3.10
3422 6670 4.348495 AAGGAAGGGGGAGCGGGA 62.348 66.667 0.00 0.00 0.00 5.14
3797 7364 4.452733 CCGGCCGAGGTTCTCACC 62.453 72.222 30.73 0.00 44.67 4.02
3800 7367 4.821589 CTGCCGGCCGAGGTTCTC 62.822 72.222 30.73 6.72 0.00 2.87
4125 8605 0.613572 TCCGTCTGCACATGGGTCTA 60.614 55.000 0.00 0.00 0.00 2.59
4130 8610 1.293963 CTGTGTCCGTCTGCACATGG 61.294 60.000 0.00 0.00 43.52 3.66
4150 8630 2.125912 CTGCGTCCCTTCTGTCCG 60.126 66.667 0.00 0.00 0.00 4.79
4157 8637 1.605753 GGAAGTTTTCTGCGTCCCTT 58.394 50.000 0.00 0.00 0.00 3.95
4222 8704 2.353406 CGTGTCCGTTTCACCCTATCTT 60.353 50.000 0.00 0.00 32.86 2.40
4227 8709 0.178533 TTTCGTGTCCGTTTCACCCT 59.821 50.000 0.00 0.00 35.01 4.34
4258 8740 3.451894 CGGCAGACCCCATTTGGC 61.452 66.667 0.00 0.00 0.00 4.52
4310 8792 1.929860 TATCCCGTCCGTCCCTGTCT 61.930 60.000 0.00 0.00 0.00 3.41
4314 8796 2.197875 CCTATCCCGTCCGTCCCT 59.802 66.667 0.00 0.00 0.00 4.20
4339 8821 3.890674 GCTAAGGCCAACTCCACG 58.109 61.111 5.01 0.00 0.00 4.94
4356 8838 1.300931 CCCGAGTGCATGATACCGG 60.301 63.158 0.00 0.00 34.10 5.28
4357 8839 0.319040 CTCCCGAGTGCATGATACCG 60.319 60.000 0.00 1.17 0.00 4.02
4358 8840 0.753262 ACTCCCGAGTGCATGATACC 59.247 55.000 0.00 0.00 40.75 2.73
4359 8841 2.623889 ACTACTCCCGAGTGCATGATAC 59.376 50.000 7.63 0.00 42.52 2.24
4360 8842 2.945456 ACTACTCCCGAGTGCATGATA 58.055 47.619 7.63 0.00 42.52 2.15
4361 8843 1.781786 ACTACTCCCGAGTGCATGAT 58.218 50.000 7.63 0.00 42.52 2.45
4362 8844 2.430248 TACTACTCCCGAGTGCATGA 57.570 50.000 7.63 0.00 42.52 3.07
4363 8845 3.187700 GTTTACTACTCCCGAGTGCATG 58.812 50.000 7.63 0.00 42.52 4.06
4364 8846 2.829720 TGTTTACTACTCCCGAGTGCAT 59.170 45.455 7.63 0.00 42.52 3.96
4365 8847 2.241160 TGTTTACTACTCCCGAGTGCA 58.759 47.619 7.63 0.00 42.52 4.57
4366 8848 3.187700 CATGTTTACTACTCCCGAGTGC 58.812 50.000 7.63 0.00 42.52 4.40
4367 8849 3.119101 AGCATGTTTACTACTCCCGAGTG 60.119 47.826 7.63 0.98 42.52 3.51
4368 8850 3.097614 AGCATGTTTACTACTCCCGAGT 58.902 45.455 2.41 2.41 45.02 4.18
4369 8851 3.130516 TCAGCATGTTTACTACTCCCGAG 59.869 47.826 0.00 0.00 37.40 4.63
4370 8852 3.093814 TCAGCATGTTTACTACTCCCGA 58.906 45.455 0.00 0.00 37.40 5.14
4371 8853 3.520290 TCAGCATGTTTACTACTCCCG 57.480 47.619 0.00 0.00 37.40 5.14
4372 8854 4.572389 CACATCAGCATGTTTACTACTCCC 59.428 45.833 0.00 0.00 40.66 4.30
4373 8855 4.572389 CCACATCAGCATGTTTACTACTCC 59.428 45.833 0.00 0.00 40.66 3.85
4374 8856 4.034510 GCCACATCAGCATGTTTACTACTC 59.965 45.833 0.00 0.00 40.66 2.59
4375 8857 3.941483 GCCACATCAGCATGTTTACTACT 59.059 43.478 0.00 0.00 40.66 2.57
4376 8858 3.689161 TGCCACATCAGCATGTTTACTAC 59.311 43.478 0.00 0.00 40.66 2.73
4377 8859 3.940852 CTGCCACATCAGCATGTTTACTA 59.059 43.478 0.00 0.00 40.66 1.82
4378 8860 2.751259 CTGCCACATCAGCATGTTTACT 59.249 45.455 0.00 0.00 40.66 2.24
4379 8861 2.749076 TCTGCCACATCAGCATGTTTAC 59.251 45.455 0.00 0.00 40.66 2.01
4380 8862 3.070476 TCTGCCACATCAGCATGTTTA 57.930 42.857 0.00 0.00 40.66 2.01
4381 8863 1.913778 TCTGCCACATCAGCATGTTT 58.086 45.000 0.00 0.00 40.66 2.83
4382 8864 1.913778 TTCTGCCACATCAGCATGTT 58.086 45.000 0.00 0.00 40.66 2.71
4383 8865 1.913778 TTTCTGCCACATCAGCATGT 58.086 45.000 0.00 0.00 44.72 3.21
4384 8866 3.520290 ATTTTCTGCCACATCAGCATG 57.480 42.857 0.00 0.00 40.04 4.06
4385 8867 5.664294 TTAATTTTCTGCCACATCAGCAT 57.336 34.783 0.00 0.00 40.04 3.79
4386 8868 5.243507 TCTTTAATTTTCTGCCACATCAGCA 59.756 36.000 0.00 0.00 38.82 4.41
4387 8869 5.713025 TCTTTAATTTTCTGCCACATCAGC 58.287 37.500 0.00 0.00 34.19 4.26
4388 8870 7.596494 TCTTCTTTAATTTTCTGCCACATCAG 58.404 34.615 0.00 0.00 35.46 2.90
4389 8871 7.448161 TCTCTTCTTTAATTTTCTGCCACATCA 59.552 33.333 0.00 0.00 0.00 3.07
4390 8872 7.820648 TCTCTTCTTTAATTTTCTGCCACATC 58.179 34.615 0.00 0.00 0.00 3.06
4391 8873 7.667219 TCTCTCTTCTTTAATTTTCTGCCACAT 59.333 33.333 0.00 0.00 0.00 3.21
4392 8874 6.998074 TCTCTCTTCTTTAATTTTCTGCCACA 59.002 34.615 0.00 0.00 0.00 4.17
4393 8875 7.389053 TCTCTCTCTTCTTTAATTTTCTGCCAC 59.611 37.037 0.00 0.00 0.00 5.01
4394 8876 7.453393 TCTCTCTCTTCTTTAATTTTCTGCCA 58.547 34.615 0.00 0.00 0.00 4.92
4395 8877 7.065683 CCTCTCTCTCTTCTTTAATTTTCTGCC 59.934 40.741 0.00 0.00 0.00 4.85
4396 8878 7.065683 CCCTCTCTCTCTTCTTTAATTTTCTGC 59.934 40.741 0.00 0.00 0.00 4.26
4397 8879 8.100164 ACCCTCTCTCTCTTCTTTAATTTTCTG 58.900 37.037 0.00 0.00 0.00 3.02
4398 8880 8.213489 ACCCTCTCTCTCTTCTTTAATTTTCT 57.787 34.615 0.00 0.00 0.00 2.52
4399 8881 8.856153 AACCCTCTCTCTCTTCTTTAATTTTC 57.144 34.615 0.00 0.00 0.00 2.29
4400 8882 9.952030 CTAACCCTCTCTCTCTTCTTTAATTTT 57.048 33.333 0.00 0.00 0.00 1.82
4401 8883 9.327731 TCTAACCCTCTCTCTCTTCTTTAATTT 57.672 33.333 0.00 0.00 0.00 1.82
4402 8884 8.903059 TCTAACCCTCTCTCTCTTCTTTAATT 57.097 34.615 0.00 0.00 0.00 1.40
4403 8885 8.119891 ACTCTAACCCTCTCTCTCTTCTTTAAT 58.880 37.037 0.00 0.00 0.00 1.40
4404 8886 7.471890 ACTCTAACCCTCTCTCTCTTCTTTAA 58.528 38.462 0.00 0.00 0.00 1.52
4405 8887 7.034967 ACTCTAACCCTCTCTCTCTTCTTTA 57.965 40.000 0.00 0.00 0.00 1.85
4406 8888 5.899278 ACTCTAACCCTCTCTCTCTTCTTT 58.101 41.667 0.00 0.00 0.00 2.52
4407 8889 5.530176 ACTCTAACCCTCTCTCTCTTCTT 57.470 43.478 0.00 0.00 0.00 2.52
4408 8890 6.012333 TGTTACTCTAACCCTCTCTCTCTTCT 60.012 42.308 0.00 0.00 37.88 2.85
4409 8891 6.181908 TGTTACTCTAACCCTCTCTCTCTTC 58.818 44.000 0.00 0.00 37.88 2.87
4410 8892 6.142259 TGTTACTCTAACCCTCTCTCTCTT 57.858 41.667 0.00 0.00 37.88 2.85
4411 8893 5.782677 TGTTACTCTAACCCTCTCTCTCT 57.217 43.478 0.00 0.00 37.88 3.10
4412 8894 9.969001 ATATATGTTACTCTAACCCTCTCTCTC 57.031 37.037 0.00 0.00 37.88 3.20
4416 8898 9.978336 ACCTATATATGTTACTCTAACCCTCTC 57.022 37.037 0.00 0.00 37.88 3.20
4460 8942 9.884636 TGCATGACACAAAGTAGTATAGTATTT 57.115 29.630 0.00 0.00 0.00 1.40
4461 8943 9.534565 CTGCATGACACAAAGTAGTATAGTATT 57.465 33.333 0.00 0.00 0.00 1.89
4462 8944 8.144478 CCTGCATGACACAAAGTAGTATAGTAT 58.856 37.037 0.00 0.00 0.00 2.12
4463 8945 7.123697 ACCTGCATGACACAAAGTAGTATAGTA 59.876 37.037 0.00 0.00 0.00 1.82
4464 8946 6.070767 ACCTGCATGACACAAAGTAGTATAGT 60.071 38.462 0.00 0.00 0.00 2.12
4465 8947 6.341316 ACCTGCATGACACAAAGTAGTATAG 58.659 40.000 0.00 0.00 0.00 1.31
4466 8948 6.294361 ACCTGCATGACACAAAGTAGTATA 57.706 37.500 0.00 0.00 0.00 1.47
4467 8949 5.165961 ACCTGCATGACACAAAGTAGTAT 57.834 39.130 0.00 0.00 0.00 2.12
4468 8950 4.562757 GGACCTGCATGACACAAAGTAGTA 60.563 45.833 0.00 0.00 0.00 1.82
4469 8951 3.403038 GACCTGCATGACACAAAGTAGT 58.597 45.455 0.00 0.00 0.00 2.73
4470 8952 2.744202 GGACCTGCATGACACAAAGTAG 59.256 50.000 0.00 0.00 0.00 2.57
4471 8953 2.105649 TGGACCTGCATGACACAAAGTA 59.894 45.455 0.00 0.00 0.00 2.24
4472 8954 1.133823 TGGACCTGCATGACACAAAGT 60.134 47.619 0.00 0.00 0.00 2.66
4473 8955 1.608055 TGGACCTGCATGACACAAAG 58.392 50.000 0.00 0.00 0.00 2.77
4474 8956 2.161855 GATGGACCTGCATGACACAAA 58.838 47.619 0.00 0.00 0.00 2.83
4475 8957 1.073603 TGATGGACCTGCATGACACAA 59.926 47.619 0.00 0.00 0.00 3.33
4476 8958 0.691904 TGATGGACCTGCATGACACA 59.308 50.000 0.00 0.00 0.00 3.72
4477 8959 1.825090 TTGATGGACCTGCATGACAC 58.175 50.000 0.00 0.00 0.00 3.67
4478 8960 2.812836 ATTGATGGACCTGCATGACA 57.187 45.000 0.00 0.00 0.00 3.58
4479 8961 4.454678 TCTTATTGATGGACCTGCATGAC 58.545 43.478 0.00 0.00 0.00 3.06
4480 8962 4.776435 TCTTATTGATGGACCTGCATGA 57.224 40.909 0.00 0.00 0.00 3.07
4481 8963 5.067954 TGATCTTATTGATGGACCTGCATG 58.932 41.667 0.00 0.00 35.14 4.06
4482 8964 5.314718 TGATCTTATTGATGGACCTGCAT 57.685 39.130 0.00 0.00 35.14 3.96
4483 8965 4.776435 TGATCTTATTGATGGACCTGCA 57.224 40.909 0.00 0.00 35.14 4.41
4484 8966 5.558818 AGATGATCTTATTGATGGACCTGC 58.441 41.667 0.00 0.00 35.14 4.85
4485 8967 8.537858 TCATAGATGATCTTATTGATGGACCTG 58.462 37.037 0.00 0.00 35.14 4.00
4486 8968 8.676397 TCATAGATGATCTTATTGATGGACCT 57.324 34.615 0.00 0.00 35.14 3.85
4513 8995 9.535170 AGTGTATGATACTACCTAATGCATAGT 57.465 33.333 0.00 1.40 33.73 2.12
4516 8998 9.535170 ACTAGTGTATGATACTACCTAATGCAT 57.465 33.333 4.03 0.00 0.00 3.96
4517 8999 8.935614 ACTAGTGTATGATACTACCTAATGCA 57.064 34.615 4.03 0.00 0.00 3.96
4551 9033 7.999545 GCTACTCATAGTGGGGAGTATCATATA 59.000 40.741 0.00 0.00 43.51 0.86
4552 9034 6.836527 GCTACTCATAGTGGGGAGTATCATAT 59.163 42.308 0.00 0.00 43.51 1.78
4553 9035 6.188407 GCTACTCATAGTGGGGAGTATCATA 58.812 44.000 0.00 0.00 43.51 2.15
4554 9036 5.020132 GCTACTCATAGTGGGGAGTATCAT 58.980 45.833 0.00 0.00 43.51 2.45
4555 9037 4.408276 GCTACTCATAGTGGGGAGTATCA 58.592 47.826 0.00 0.00 43.51 2.15
4556 9038 3.764972 GGCTACTCATAGTGGGGAGTATC 59.235 52.174 0.00 0.00 43.51 2.24
4557 9039 3.403051 AGGCTACTCATAGTGGGGAGTAT 59.597 47.826 0.00 0.00 43.51 2.12
4558 9040 2.789992 AGGCTACTCATAGTGGGGAGTA 59.210 50.000 0.00 0.00 42.30 2.59
4559 9041 1.576272 AGGCTACTCATAGTGGGGAGT 59.424 52.381 0.00 0.00 45.72 3.85
4560 9042 2.390225 AGGCTACTCATAGTGGGGAG 57.610 55.000 0.00 0.00 37.18 4.30
4561 9043 3.052414 TGTTAGGCTACTCATAGTGGGGA 60.052 47.826 0.00 0.00 0.00 4.81
4562 9044 3.305720 TGTTAGGCTACTCATAGTGGGG 58.694 50.000 0.00 0.00 0.00 4.96
4563 9045 4.800914 GCATGTTAGGCTACTCATAGTGGG 60.801 50.000 9.92 1.94 0.00 4.61
4564 9046 4.202253 TGCATGTTAGGCTACTCATAGTGG 60.202 45.833 9.92 0.00 0.00 4.00
4565 9047 4.948847 TGCATGTTAGGCTACTCATAGTG 58.051 43.478 9.92 3.58 0.00 2.74
4566 9048 5.360591 GTTGCATGTTAGGCTACTCATAGT 58.639 41.667 9.92 0.00 34.80 2.12
4567 9049 4.445718 CGTTGCATGTTAGGCTACTCATAG 59.554 45.833 9.92 7.19 35.35 2.23
4568 9050 4.368315 CGTTGCATGTTAGGCTACTCATA 58.632 43.478 9.92 0.00 35.35 2.15
4569 9051 3.198068 CGTTGCATGTTAGGCTACTCAT 58.802 45.455 0.00 0.00 35.35 2.90
4570 9052 2.616960 CGTTGCATGTTAGGCTACTCA 58.383 47.619 0.00 0.00 35.35 3.41
4571 9053 1.327764 GCGTTGCATGTTAGGCTACTC 59.672 52.381 0.00 0.00 35.35 2.59
4572 9054 1.338674 TGCGTTGCATGTTAGGCTACT 60.339 47.619 12.69 0.00 35.35 2.57
4573 9055 1.083489 TGCGTTGCATGTTAGGCTAC 58.917 50.000 12.69 0.00 31.71 3.58
4574 9056 1.083489 GTGCGTTGCATGTTAGGCTA 58.917 50.000 12.69 0.00 41.91 3.93
4575 9057 0.888736 TGTGCGTTGCATGTTAGGCT 60.889 50.000 12.69 0.00 41.91 4.58
4576 9058 0.729140 GTGTGCGTTGCATGTTAGGC 60.729 55.000 0.00 0.81 41.91 3.93
4577 9059 0.590682 TGTGTGCGTTGCATGTTAGG 59.409 50.000 0.00 0.00 41.91 2.69
4578 9060 2.244251 CATGTGTGCGTTGCATGTTAG 58.756 47.619 0.00 0.00 41.91 2.34
4579 9061 1.665448 GCATGTGTGCGTTGCATGTTA 60.665 47.619 0.00 0.00 41.91 2.41
4580 9062 0.940519 GCATGTGTGCGTTGCATGTT 60.941 50.000 0.00 0.00 41.91 2.71
4581 9063 1.372004 GCATGTGTGCGTTGCATGT 60.372 52.632 0.00 0.00 41.91 3.21
4582 9064 3.454574 GCATGTGTGCGTTGCATG 58.545 55.556 0.00 0.00 41.91 4.06
4601 9083 4.764679 TTAATCTTGACATGTGTGCACC 57.235 40.909 15.69 6.37 0.00 5.01
4642 9124 7.540055 GTCAAATTCAACTGCCATTTAGAGAAG 59.460 37.037 0.00 0.00 0.00 2.85
4705 9187 2.543012 TCACACGCTATACTCGCTACTC 59.457 50.000 0.00 0.00 0.00 2.59
4706 9188 2.558378 TCACACGCTATACTCGCTACT 58.442 47.619 0.00 0.00 0.00 2.57
4707 9189 3.227147 CATCACACGCTATACTCGCTAC 58.773 50.000 0.00 0.00 0.00 3.58
4708 9190 2.225727 CCATCACACGCTATACTCGCTA 59.774 50.000 0.00 0.00 0.00 4.26
4709 9191 1.001268 CCATCACACGCTATACTCGCT 60.001 52.381 0.00 0.00 0.00 4.93
4710 9192 1.409412 CCATCACACGCTATACTCGC 58.591 55.000 0.00 0.00 0.00 5.03
4711 9193 1.337071 ACCCATCACACGCTATACTCG 59.663 52.381 0.00 0.00 0.00 4.18
4712 9194 3.454371 AACCCATCACACGCTATACTC 57.546 47.619 0.00 0.00 0.00 2.59
4713 9195 3.055385 ACAAACCCATCACACGCTATACT 60.055 43.478 0.00 0.00 0.00 2.12
4714 9196 3.267483 ACAAACCCATCACACGCTATAC 58.733 45.455 0.00 0.00 0.00 1.47
4715 9197 3.620427 ACAAACCCATCACACGCTATA 57.380 42.857 0.00 0.00 0.00 1.31
4716 9198 2.487762 CAACAAACCCATCACACGCTAT 59.512 45.455 0.00 0.00 0.00 2.97
4793 9280 4.262121 CCTGCAACAGACAATCCATTTCAA 60.262 41.667 0.00 0.00 32.44 2.69
4943 9430 1.270625 CCAAAGACAGTGGCGAGGTTA 60.271 52.381 0.00 0.00 0.00 2.85
5084 9571 2.615493 CCCTTTGGATGAGCTACACGTT 60.615 50.000 0.00 0.00 0.00 3.99
5090 9577 4.380843 TTGTTTCCCTTTGGATGAGCTA 57.619 40.909 0.00 0.00 41.40 3.32
5132 9619 4.626081 AGGAGCGCGGCAAGTTGT 62.626 61.111 8.83 0.00 0.00 3.32
5444 9931 1.225704 GCTAGTGAATGGGCTGCCT 59.774 57.895 19.68 0.00 0.00 4.75
5522 10011 1.006571 GTCGAACAACTCGGCCTCA 60.007 57.895 0.00 0.00 46.75 3.86
5546 10035 1.123861 AGACCAGCTTGCTCCTGTGA 61.124 55.000 0.00 0.00 0.00 3.58
5561 10050 0.034337 TGTACGCCAACTTGGAGACC 59.966 55.000 17.59 8.06 39.92 3.85
5681 10170 0.109342 CCTCCTCCACTTGTTGCACT 59.891 55.000 0.00 0.00 0.00 4.40
5722 10211 4.704833 CTGCCGACCACACTGGGG 62.705 72.222 0.00 0.00 43.37 4.96
5816 10305 2.497675 CTGGAAGCTGCTGGAGTTACTA 59.502 50.000 1.35 0.00 0.00 1.82
6396 10885 2.034879 CGTGGGTGTCATCACTGGC 61.035 63.158 7.41 0.00 43.41 4.85
6408 10897 3.958147 CTTCATCGCTGGCGTGGGT 62.958 63.158 14.55 0.00 40.74 4.51
6454 10943 2.093181 ACCTGCGTCATATTACTGGCAA 60.093 45.455 0.00 0.00 0.00 4.52
6458 10947 7.715265 AATCTAAACCTGCGTCATATTACTG 57.285 36.000 0.00 0.00 0.00 2.74
6460 10949 8.700644 CACTAATCTAAACCTGCGTCATATTAC 58.299 37.037 0.00 0.00 0.00 1.89
6472 10961 5.339008 TCATCGTGCACTAATCTAAACCT 57.661 39.130 16.19 0.00 0.00 3.50
6511 11002 7.462571 ACCAATCTATACATGCATACGAGTA 57.537 36.000 0.00 0.00 0.00 2.59
6525 11016 9.232882 ACCTTTCCATTAACCTACCAATCTATA 57.767 33.333 0.00 0.00 0.00 1.31
6532 11023 8.215050 CACATATACCTTTCCATTAACCTACCA 58.785 37.037 0.00 0.00 0.00 3.25
6568 11066 7.498239 ACAATCACCACTAAGATCAATGATCAG 59.502 37.037 23.41 15.56 41.12 2.90
6569 11067 7.341030 ACAATCACCACTAAGATCAATGATCA 58.659 34.615 23.41 0.00 41.12 2.92
6570 11068 7.798596 ACAATCACCACTAAGATCAATGATC 57.201 36.000 15.01 15.01 39.17 2.92
6571 11069 9.685276 TTAACAATCACCACTAAGATCAATGAT 57.315 29.630 0.00 0.00 0.00 2.45
6629 11127 9.826574 GTTGTTATACAAGATAACTACATCCCA 57.173 33.333 13.51 0.00 39.00 4.37
6676 11174 2.521950 CTAGGGCTGCCGCTAGGA 60.522 66.667 24.80 6.98 45.73 2.94
6699 11197 6.440647 GGTGGTCTGGTGATCATTATATAGGA 59.559 42.308 0.00 0.00 35.55 2.94
6716 11214 3.377656 ACCTAGCACGGTGGTCTG 58.622 61.111 17.07 11.31 35.52 3.51
6908 11406 3.327757 AGGTGAGTTTGGCAGTAATGAGA 59.672 43.478 0.00 0.00 0.00 3.27
7151 11649 0.178958 AGGTGTCGAAGAGGTGGACT 60.179 55.000 0.00 0.00 36.95 3.85
7176 11674 3.785859 GAGGTGCGCCCAGATGGA 61.786 66.667 14.07 0.00 37.39 3.41
7553 12051 1.894756 GTTGGTGGTGTTGCCGCTA 60.895 57.895 0.00 0.00 46.69 4.26
7555 12053 4.279043 GGTTGGTGGTGTTGCCGC 62.279 66.667 0.00 0.00 46.78 6.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.