Multiple sequence alignment - TraesCS5A01G033400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G033400 chr5A 100.000 4158 0 0 1 4158 30406025 30410182 0.000000e+00 7679
1 TraesCS5A01G033400 chr5A 89.195 3378 235 66 1 3321 555772217 555775521 0.000000e+00 4096
2 TraesCS5A01G033400 chr5A 89.873 158 11 3 3938 4095 630018695 630018543 9.120000e-47 198
3 TraesCS5A01G033400 chr5A 95.200 125 4 1 3623 3747 402348484 402348362 3.280000e-46 196
4 TraesCS5A01G033400 chr5A 88.235 85 6 2 3763 3847 11516885 11516805 9.510000e-17 99
5 TraesCS5A01G033400 chr5D 94.800 3673 149 22 1 3639 42018332 42021996 0.000000e+00 5686
6 TraesCS5A01G033400 chr5D 89.147 3400 217 75 1 3321 440161876 440165202 0.000000e+00 4095
7 TraesCS5A01G033400 chr5D 93.610 313 10 6 3763 4071 42032166 42032472 3.790000e-125 459
8 TraesCS5A01G033400 chr5D 90.123 81 6 2 3349 3427 440165194 440165274 2.040000e-18 104
9 TraesCS5A01G033400 chr5D 88.235 85 6 2 3763 3847 14967245 14967165 9.510000e-17 99
10 TraesCS5A01G033400 chr5B 92.971 3258 137 45 1 3210 36721978 36725191 0.000000e+00 4663
11 TraesCS5A01G033400 chr5B 89.294 3400 218 72 1 3321 535112788 535116120 0.000000e+00 4128
12 TraesCS5A01G033400 chr5B 94.670 788 42 0 2423 3210 36745965 36745178 0.000000e+00 1223
13 TraesCS5A01G033400 chr5B 95.520 692 30 1 1 692 36766179 36765489 0.000000e+00 1105
14 TraesCS5A01G033400 chr5B 94.643 224 9 2 3399 3619 36744977 36744754 1.110000e-90 344
15 TraesCS5A01G033400 chr5B 95.973 149 4 2 1275 1423 36765233 36765087 1.490000e-59 241
16 TraesCS5A01G033400 chr5B 98.473 131 2 0 1449 1579 36765090 36764960 8.990000e-57 231
17 TraesCS5A01G033400 chr5B 94.366 142 5 3 3242 3381 36745178 36745038 9.050000e-52 215
18 TraesCS5A01G033400 chr5B 92.063 126 8 2 3242 3365 36725191 36725316 4.270000e-40 176
19 TraesCS5A01G033400 chr5B 89.773 88 7 2 3349 3434 535116112 535116199 1.220000e-20 111
20 TraesCS5A01G033400 chr5B 89.535 86 3 4 3763 3847 13700978 13700898 2.040000e-18 104
21 TraesCS5A01G033400 chr7B 93.985 133 6 1 3623 3755 728671953 728671823 2.540000e-47 200
22 TraesCS5A01G033400 chr1A 93.382 136 7 1 3612 3747 213289525 213289392 2.540000e-47 200
23 TraesCS5A01G033400 chr6B 93.893 131 6 1 3617 3747 445884230 445884358 3.280000e-46 196
24 TraesCS5A01G033400 chr3B 95.200 125 4 1 3623 3747 200484005 200483883 3.280000e-46 196
25 TraesCS5A01G033400 chr4A 93.798 129 6 1 3623 3751 627359959 627359833 4.240000e-45 193
26 TraesCS5A01G033400 chr4A 90.714 140 11 1 3608 3747 726659580 726659443 7.100000e-43 185
27 TraesCS5A01G033400 chr7A 92.481 133 8 1 3616 3748 77440538 77440668 5.490000e-44 189
28 TraesCS5A01G033400 chr2A 90.780 141 9 3 3613 3752 757947757 757947894 7.100000e-43 185
29 TraesCS5A01G033400 chr3D 89.062 128 11 3 3848 3974 46633780 46633655 5.570000e-34 156


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G033400 chr5A 30406025 30410182 4157 False 7679.000000 7679 100.000000 1 4158 1 chr5A.!!$F1 4157
1 TraesCS5A01G033400 chr5A 555772217 555775521 3304 False 4096.000000 4096 89.195000 1 3321 1 chr5A.!!$F2 3320
2 TraesCS5A01G033400 chr5D 42018332 42021996 3664 False 5686.000000 5686 94.800000 1 3639 1 chr5D.!!$F1 3638
3 TraesCS5A01G033400 chr5D 440161876 440165274 3398 False 2099.500000 4095 89.635000 1 3427 2 chr5D.!!$F3 3426
4 TraesCS5A01G033400 chr5B 36721978 36725316 3338 False 2419.500000 4663 92.517000 1 3365 2 chr5B.!!$F1 3364
5 TraesCS5A01G033400 chr5B 535112788 535116199 3411 False 2119.500000 4128 89.533500 1 3434 2 chr5B.!!$F2 3433
6 TraesCS5A01G033400 chr5B 36744754 36745965 1211 True 594.000000 1223 94.559667 2423 3619 3 chr5B.!!$R2 1196
7 TraesCS5A01G033400 chr5B 36764960 36766179 1219 True 525.666667 1105 96.655333 1 1579 3 chr5B.!!$R3 1578

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
834 928 1.591248 CGTTTCATACGTTGTGCTGC 58.409 50.0 0.0 0.0 45.14 5.25 F
1206 1321 0.537371 TCACTCTCAGCCTCGTCACA 60.537 55.0 0.0 0.0 0.00 3.58 F
2121 2240 0.745845 GGCCACACGATGATTCAGCT 60.746 55.0 0.0 0.0 0.00 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1737 1852 0.519077 GGCCAAAGCTGAGAACGAAG 59.481 55.0 0.0 0.0 39.73 3.79 R
2982 3152 0.313672 GCGTGAATGTGAAAAGGGCA 59.686 50.0 0.0 0.0 0.00 5.36 R
3996 4241 0.027586 GCTCACGTTGTGCTTTCGTT 59.972 50.0 0.0 0.0 34.37 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
107 108 5.745312 TGTTGGATGACTTGTATCTCAGT 57.255 39.130 0.00 0.00 0.00 3.41
170 171 2.227194 GCTTTGGGAAAGAAAGGTCGA 58.773 47.619 0.16 0.00 41.02 4.20
230 231 6.487299 AATAGAGGAATTGTCCCTACACTC 57.513 41.667 0.00 0.00 46.30 3.51
615 616 7.771183 TGCTGGGAAGCTTATAATTAAGTTTG 58.229 34.615 0.00 0.00 38.50 2.93
672 680 2.785540 TGCTGTCTGGCATGTTGATA 57.214 45.000 0.00 0.00 37.29 2.15
736 827 8.741603 ATTTGATCTGACATGTTGATGTATCA 57.258 30.769 16.58 10.14 43.22 2.15
737 828 8.741603 TTTGATCTGACATGTTGATGTATCAT 57.258 30.769 16.58 0.00 43.22 2.45
738 829 7.724305 TGATCTGACATGTTGATGTATCATG 57.276 36.000 16.58 0.00 43.22 3.07
823 917 4.756135 GGGTTCAGTTGGTAACGTTTCATA 59.244 41.667 5.91 0.00 42.51 2.15
834 928 1.591248 CGTTTCATACGTTGTGCTGC 58.409 50.000 0.00 0.00 45.14 5.25
836 930 2.349438 CGTTTCATACGTTGTGCTGCTT 60.349 45.455 0.00 0.00 45.14 3.91
837 931 3.120820 CGTTTCATACGTTGTGCTGCTTA 60.121 43.478 0.00 0.00 45.14 3.09
838 932 4.394795 GTTTCATACGTTGTGCTGCTTAG 58.605 43.478 0.00 0.00 0.00 2.18
839 933 3.313012 TCATACGTTGTGCTGCTTAGT 57.687 42.857 0.00 0.00 0.00 2.24
840 934 3.659786 TCATACGTTGTGCTGCTTAGTT 58.340 40.909 0.00 0.00 0.00 2.24
841 935 4.811908 TCATACGTTGTGCTGCTTAGTTA 58.188 39.130 0.00 0.00 0.00 2.24
860 975 3.967886 GCTGCCAGCGAATAGACTA 57.032 52.632 0.00 0.00 0.00 2.59
981 1096 7.038302 TCCATAATGAACTAGACCAAGTGAAGT 60.038 37.037 0.00 0.00 0.00 3.01
1014 1129 2.122768 GAGACAATGGAGGGAGATGGT 58.877 52.381 0.00 0.00 0.00 3.55
1062 1177 1.037579 TCATCGATGACCGGTCAGCT 61.038 55.000 40.49 27.70 43.26 4.24
1102 1217 4.424711 GGGAGCCGGTGCCATTCA 62.425 66.667 15.24 0.00 36.40 2.57
1206 1321 0.537371 TCACTCTCAGCCTCGTCACA 60.537 55.000 0.00 0.00 0.00 3.58
1236 1351 2.674380 GGCCACCTTGGTGAGCTG 60.674 66.667 20.27 5.52 40.46 4.24
1309 1424 2.564771 GCATCATGGTAACTAGCTGCA 58.435 47.619 1.02 0.00 34.74 4.41
1313 1428 2.831526 TCATGGTAACTAGCTGCACTCA 59.168 45.455 1.02 0.00 37.61 3.41
1704 1819 1.111116 ACATGGTGCTTGCTGTGCTT 61.111 50.000 0.00 0.00 0.00 3.91
1737 1852 1.875813 CATCTCGTGGCTCGCTGTC 60.876 63.158 3.73 0.00 39.67 3.51
1861 1976 2.430704 TAAGGAGACGTGGACCGGGT 62.431 60.000 6.32 0.00 42.24 5.28
1911 2026 1.312815 GATATGCCAAGCTCGCCTTT 58.687 50.000 3.48 0.00 0.00 3.11
1954 2069 5.682862 GCGTGAGTAAATTTATCAGCCATTG 59.317 40.000 0.31 0.00 0.00 2.82
1970 2089 3.119495 GCCATTGCTAACTGTTTGGTAGG 60.119 47.826 9.30 2.79 36.49 3.18
1995 2114 5.241285 TCTTGCTTGTTTATGTCTTGCATCA 59.759 36.000 0.00 0.00 38.94 3.07
2069 2188 2.269241 GGCTTCCTCCCCAACTCG 59.731 66.667 0.00 0.00 0.00 4.18
2102 2221 7.522073 GCTCTTGATTCACTCTCTATCTGGTAG 60.522 44.444 0.00 0.00 0.00 3.18
2110 2229 1.338337 CTCTATCTGGTAGGCCACACG 59.662 57.143 5.01 0.00 40.46 4.49
2121 2240 0.745845 GGCCACACGATGATTCAGCT 60.746 55.000 0.00 0.00 0.00 4.24
2140 2259 6.338146 TCAGCTCATGTTATAGTTACACACC 58.662 40.000 0.00 0.00 0.00 4.16
2141 2260 6.154534 TCAGCTCATGTTATAGTTACACACCT 59.845 38.462 0.00 0.00 0.00 4.00
2142 2261 6.818644 CAGCTCATGTTATAGTTACACACCTT 59.181 38.462 0.00 0.00 0.00 3.50
2162 2281 6.934645 CACCTTGTTGGAAGTTCTAATGTCTA 59.065 38.462 4.86 0.00 39.71 2.59
2166 2285 8.561738 TTGTTGGAAGTTCTAATGTCTAATCC 57.438 34.615 4.86 0.00 0.00 3.01
2167 2286 7.685481 TGTTGGAAGTTCTAATGTCTAATCCA 58.315 34.615 4.86 0.00 32.90 3.41
2168 2287 8.328758 TGTTGGAAGTTCTAATGTCTAATCCAT 58.671 33.333 4.86 0.00 34.65 3.41
2200 2335 2.960819 ACTTGCGTCGCTATCTCTTTT 58.039 42.857 19.50 0.00 0.00 2.27
2287 2422 0.949105 GGTCAGTGCAAACGACCGAT 60.949 55.000 13.05 0.00 39.86 4.18
2638 2796 3.096092 AGTTTGCACTCAACCAAAGGAA 58.904 40.909 0.00 0.00 32.18 3.36
2659 2817 8.391075 AGGAACTGAAAATTCGTTCTGAAATA 57.609 30.769 19.84 0.00 37.46 1.40
2671 2829 4.269603 CGTTCTGAAATATCTGCAGGAGTG 59.730 45.833 15.13 0.00 0.00 3.51
2713 2871 5.297776 GCAAGTCATAGTTGCCTATGTCAAT 59.702 40.000 8.02 0.00 46.09 2.57
2737 2895 1.692519 GGGGCTTACTACATCATCGGT 59.307 52.381 0.00 0.00 0.00 4.69
2818 2976 1.871039 GCTTCCCGCGCTAATTTCATA 59.129 47.619 5.56 0.00 0.00 2.15
2819 2977 2.096218 GCTTCCCGCGCTAATTTCATAG 60.096 50.000 5.56 0.00 0.00 2.23
2982 3152 2.355193 GGGAGAGCGAGGTGAGCTT 61.355 63.158 0.00 0.00 46.13 3.74
2992 3162 0.185901 AGGTGAGCTTGCCCTTTTCA 59.814 50.000 4.16 0.00 0.00 2.69
3076 3256 2.476619 GACACGGCTATGTCATGTATGC 59.523 50.000 13.81 0.00 46.89 3.14
3275 3465 4.023963 GCCGAACTTTATTATCAAGAGGCC 60.024 45.833 0.00 0.00 35.66 5.19
3429 3666 3.925379 TGATTTCTTGAGCTCTTACGCA 58.075 40.909 16.19 1.97 0.00 5.24
3438 3675 4.252878 TGAGCTCTTACGCATTGAATTCA 58.747 39.130 16.19 3.38 0.00 2.57
3486 3723 1.190643 CGCCCCCAAATTATTGTGGT 58.809 50.000 5.79 0.00 32.68 4.16
3559 3803 4.584325 TCAGCCCAGCAAATTATTATGGAC 59.416 41.667 5.63 0.00 32.55 4.02
3562 3806 4.792704 GCCCAGCAAATTATTATGGACACG 60.793 45.833 5.63 0.00 32.55 4.49
3619 3864 1.087501 GCCTCCCGAGTTAAAAGCTG 58.912 55.000 0.00 0.00 0.00 4.24
3621 3866 1.087501 CTCCCGAGTTAAAAGCTGCC 58.912 55.000 0.00 0.00 0.00 4.85
3623 3868 1.313091 CCCGAGTTAAAAGCTGCCCC 61.313 60.000 0.00 0.00 0.00 5.80
3639 3884 0.179065 CCCCCTCCGTTCCGAATTAC 60.179 60.000 0.00 0.00 0.00 1.89
3640 3885 0.828677 CCCCTCCGTTCCGAATTACT 59.171 55.000 0.00 0.00 0.00 2.24
3641 3886 1.208776 CCCCTCCGTTCCGAATTACTT 59.791 52.381 0.00 0.00 0.00 2.24
3642 3887 2.277084 CCCTCCGTTCCGAATTACTTG 58.723 52.381 0.00 0.00 0.00 3.16
3643 3888 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
3644 3889 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
3645 3890 3.368116 CCTCCGTTCCGAATTACTTGTCT 60.368 47.826 0.00 0.00 0.00 3.41
3646 3891 4.243270 CTCCGTTCCGAATTACTTGTCTT 58.757 43.478 0.00 0.00 0.00 3.01
3647 3892 3.991773 TCCGTTCCGAATTACTTGTCTTG 59.008 43.478 0.00 0.00 0.00 3.02
3648 3893 3.124636 CCGTTCCGAATTACTTGTCTTGG 59.875 47.826 0.00 0.00 0.00 3.61
3649 3894 3.991773 CGTTCCGAATTACTTGTCTTGGA 59.008 43.478 0.00 0.00 0.00 3.53
3650 3895 4.630069 CGTTCCGAATTACTTGTCTTGGAT 59.370 41.667 0.00 0.00 0.00 3.41
3651 3896 5.121768 CGTTCCGAATTACTTGTCTTGGATT 59.878 40.000 0.00 0.00 0.00 3.01
3652 3897 6.348213 CGTTCCGAATTACTTGTCTTGGATTT 60.348 38.462 0.00 0.00 0.00 2.17
3653 3898 6.494893 TCCGAATTACTTGTCTTGGATTTG 57.505 37.500 0.00 0.00 0.00 2.32
3654 3899 6.001460 TCCGAATTACTTGTCTTGGATTTGT 58.999 36.000 0.00 0.00 0.00 2.83
3655 3900 6.148811 TCCGAATTACTTGTCTTGGATTTGTC 59.851 38.462 0.00 0.00 0.00 3.18
3656 3901 6.149474 CCGAATTACTTGTCTTGGATTTGTCT 59.851 38.462 0.00 0.00 0.00 3.41
3657 3902 7.333423 CCGAATTACTTGTCTTGGATTTGTCTA 59.667 37.037 0.00 0.00 0.00 2.59
3658 3903 8.383619 CGAATTACTTGTCTTGGATTTGTCTAG 58.616 37.037 0.00 0.00 0.00 2.43
3659 3904 9.436957 GAATTACTTGTCTTGGATTTGTCTAGA 57.563 33.333 0.00 0.00 0.00 2.43
3660 3905 9.965902 AATTACTTGTCTTGGATTTGTCTAGAT 57.034 29.630 0.00 0.00 0.00 1.98
3662 3907 9.871238 TTACTTGTCTTGGATTTGTCTAGATAC 57.129 33.333 0.00 0.00 0.00 2.24
3663 3908 7.907389 ACTTGTCTTGGATTTGTCTAGATACA 58.093 34.615 0.00 0.00 0.00 2.29
3664 3909 7.819900 ACTTGTCTTGGATTTGTCTAGATACAC 59.180 37.037 0.00 0.00 0.00 2.90
3665 3910 7.239763 TGTCTTGGATTTGTCTAGATACACA 57.760 36.000 0.00 0.00 0.00 3.72
3666 3911 7.851228 TGTCTTGGATTTGTCTAGATACACAT 58.149 34.615 0.00 0.00 0.00 3.21
3667 3912 7.981789 TGTCTTGGATTTGTCTAGATACACATC 59.018 37.037 0.00 0.00 36.34 3.06
3670 3915 5.844004 GGATTTGTCTAGATACACATCCGT 58.156 41.667 11.81 0.00 43.29 4.69
3671 3916 6.978338 GGATTTGTCTAGATACACATCCGTA 58.022 40.000 11.81 0.00 43.29 4.02
3672 3917 7.603651 GGATTTGTCTAGATACACATCCGTAT 58.396 38.462 11.81 0.00 43.29 3.06
3673 3918 7.755822 GGATTTGTCTAGATACACATCCGTATC 59.244 40.741 11.81 3.42 43.29 2.24
3682 3927 7.618502 GATACACATCCGTATCTAGACTCAT 57.381 40.000 0.00 0.00 42.93 2.90
3683 3928 8.046294 GATACACATCCGTATCTAGACTCATT 57.954 38.462 0.00 0.00 42.93 2.57
3684 3929 6.716934 ACACATCCGTATCTAGACTCATTT 57.283 37.500 0.00 0.00 0.00 2.32
3685 3930 7.113658 ACACATCCGTATCTAGACTCATTTT 57.886 36.000 0.00 0.00 0.00 1.82
3686 3931 6.980978 ACACATCCGTATCTAGACTCATTTTG 59.019 38.462 0.00 0.00 0.00 2.44
3687 3932 7.147897 ACACATCCGTATCTAGACTCATTTTGA 60.148 37.037 0.00 0.00 0.00 2.69
3688 3933 7.869937 CACATCCGTATCTAGACTCATTTTGAT 59.130 37.037 0.00 0.00 0.00 2.57
3689 3934 7.869937 ACATCCGTATCTAGACTCATTTTGATG 59.130 37.037 0.00 2.96 0.00 3.07
3690 3935 6.216569 TCCGTATCTAGACTCATTTTGATGC 58.783 40.000 0.00 0.00 0.00 3.91
3691 3936 6.040955 TCCGTATCTAGACTCATTTTGATGCT 59.959 38.462 0.00 0.00 0.00 3.79
3692 3937 7.230712 TCCGTATCTAGACTCATTTTGATGCTA 59.769 37.037 0.00 0.00 0.00 3.49
3693 3938 7.540400 CCGTATCTAGACTCATTTTGATGCTAG 59.460 40.741 0.00 0.00 34.28 3.42
3694 3939 8.293157 CGTATCTAGACTCATTTTGATGCTAGA 58.707 37.037 13.90 13.90 40.25 2.43
3698 3943 9.360901 TCTAGACTCATTTTGATGCTAGATACT 57.639 33.333 0.00 0.00 35.75 2.12
3699 3944 9.979578 CTAGACTCATTTTGATGCTAGATACTT 57.020 33.333 0.00 0.00 34.60 2.24
3700 3945 8.885494 AGACTCATTTTGATGCTAGATACTTC 57.115 34.615 0.00 0.00 0.00 3.01
3701 3946 8.703743 AGACTCATTTTGATGCTAGATACTTCT 58.296 33.333 0.00 0.00 35.90 2.85
3702 3947 8.659925 ACTCATTTTGATGCTAGATACTTCTG 57.340 34.615 0.00 0.00 33.17 3.02
3703 3948 8.263640 ACTCATTTTGATGCTAGATACTTCTGT 58.736 33.333 0.00 0.00 33.17 3.41
3704 3949 9.755804 CTCATTTTGATGCTAGATACTTCTGTA 57.244 33.333 0.00 0.00 33.17 2.74
3733 3978 8.480643 AGACAAATCTAAGACAAGTAATTCGG 57.519 34.615 0.00 0.00 31.46 4.30
3734 3979 8.311836 AGACAAATCTAAGACAAGTAATTCGGA 58.688 33.333 0.00 0.00 31.46 4.55
3735 3980 8.842358 ACAAATCTAAGACAAGTAATTCGGAA 57.158 30.769 0.00 0.00 0.00 4.30
3736 3981 8.718734 ACAAATCTAAGACAAGTAATTCGGAAC 58.281 33.333 0.00 0.00 0.00 3.62
3750 3995 3.294904 GGAACGGAGGGAGTAGGAA 57.705 57.895 0.00 0.00 0.00 3.36
3751 3996 1.112950 GGAACGGAGGGAGTAGGAAG 58.887 60.000 0.00 0.00 0.00 3.46
3752 3997 1.619160 GGAACGGAGGGAGTAGGAAGT 60.619 57.143 0.00 0.00 0.00 3.01
3753 3998 2.357569 GGAACGGAGGGAGTAGGAAGTA 60.358 54.545 0.00 0.00 0.00 2.24
3754 3999 3.359950 GAACGGAGGGAGTAGGAAGTAA 58.640 50.000 0.00 0.00 0.00 2.24
3755 4000 3.684408 ACGGAGGGAGTAGGAAGTAAT 57.316 47.619 0.00 0.00 0.00 1.89
3756 4001 4.803329 ACGGAGGGAGTAGGAAGTAATA 57.197 45.455 0.00 0.00 0.00 0.98
3757 4002 5.336491 ACGGAGGGAGTAGGAAGTAATAT 57.664 43.478 0.00 0.00 0.00 1.28
3758 4003 6.460103 ACGGAGGGAGTAGGAAGTAATATA 57.540 41.667 0.00 0.00 0.00 0.86
3759 4004 6.244654 ACGGAGGGAGTAGGAAGTAATATAC 58.755 44.000 0.00 0.00 0.00 1.47
3760 4005 6.045341 ACGGAGGGAGTAGGAAGTAATATACT 59.955 42.308 0.00 0.00 41.73 2.12
3761 4006 6.374894 CGGAGGGAGTAGGAAGTAATATACTG 59.625 46.154 0.00 0.00 39.39 2.74
3762 4007 7.240167 GGAGGGAGTAGGAAGTAATATACTGT 58.760 42.308 0.00 0.00 39.39 3.55
3763 4008 8.389366 GGAGGGAGTAGGAAGTAATATACTGTA 58.611 40.741 0.00 0.00 39.39 2.74
3764 4009 9.452287 GAGGGAGTAGGAAGTAATATACTGTAG 57.548 40.741 0.00 0.00 39.39 2.74
3765 4010 9.180282 AGGGAGTAGGAAGTAATATACTGTAGA 57.820 37.037 0.00 0.00 39.39 2.59
3766 4011 9.978336 GGGAGTAGGAAGTAATATACTGTAGAT 57.022 37.037 0.00 0.00 39.39 1.98
3773 4018 9.425577 GGAAGTAATATACTGTAGATCAAAGCC 57.574 37.037 0.00 0.00 39.39 4.35
3777 4022 9.982651 GTAATATACTGTAGATCAAAGCCTTCA 57.017 33.333 0.00 0.00 0.00 3.02
3779 4024 9.553064 AATATACTGTAGATCAAAGCCTTCAAG 57.447 33.333 0.00 0.00 0.00 3.02
3780 4025 4.006319 ACTGTAGATCAAAGCCTTCAAGC 58.994 43.478 0.00 0.00 0.00 4.01
3788 4033 3.523806 AGCCTTCAAGCTTCTCGAC 57.476 52.632 0.00 0.00 41.41 4.20
3789 4034 0.036858 AGCCTTCAAGCTTCTCGACC 60.037 55.000 0.00 0.00 41.41 4.79
3790 4035 0.320771 GCCTTCAAGCTTCTCGACCA 60.321 55.000 0.00 0.00 0.00 4.02
3791 4036 1.719600 CCTTCAAGCTTCTCGACCAG 58.280 55.000 0.00 0.00 0.00 4.00
3792 4037 1.001406 CCTTCAAGCTTCTCGACCAGT 59.999 52.381 0.00 0.00 0.00 4.00
3793 4038 2.548920 CCTTCAAGCTTCTCGACCAGTT 60.549 50.000 0.00 0.00 0.00 3.16
3794 4039 2.440539 TCAAGCTTCTCGACCAGTTC 57.559 50.000 0.00 0.00 0.00 3.01
3795 4040 1.686587 TCAAGCTTCTCGACCAGTTCA 59.313 47.619 0.00 0.00 0.00 3.18
3796 4041 2.102420 TCAAGCTTCTCGACCAGTTCAA 59.898 45.455 0.00 0.00 0.00 2.69
3797 4042 2.872245 CAAGCTTCTCGACCAGTTCAAA 59.128 45.455 0.00 0.00 0.00 2.69
3798 4043 3.194005 AGCTTCTCGACCAGTTCAAAA 57.806 42.857 0.00 0.00 0.00 2.44
3799 4044 3.541632 AGCTTCTCGACCAGTTCAAAAA 58.458 40.909 0.00 0.00 0.00 1.94
3800 4045 4.137543 AGCTTCTCGACCAGTTCAAAAAT 58.862 39.130 0.00 0.00 0.00 1.82
3801 4046 4.023707 AGCTTCTCGACCAGTTCAAAAATG 60.024 41.667 0.00 0.00 0.00 2.32
3802 4047 3.896648 TCTCGACCAGTTCAAAAATGC 57.103 42.857 0.00 0.00 0.00 3.56
3803 4048 2.552315 TCTCGACCAGTTCAAAAATGCC 59.448 45.455 0.00 0.00 0.00 4.40
3804 4049 1.265635 TCGACCAGTTCAAAAATGCCG 59.734 47.619 0.00 0.00 0.00 5.69
3805 4050 1.001815 CGACCAGTTCAAAAATGCCGT 60.002 47.619 0.00 0.00 0.00 5.68
3806 4051 2.393764 GACCAGTTCAAAAATGCCGTG 58.606 47.619 0.00 0.00 0.00 4.94
3807 4052 1.754226 ACCAGTTCAAAAATGCCGTGT 59.246 42.857 0.00 0.00 0.00 4.49
3808 4053 2.126467 CCAGTTCAAAAATGCCGTGTG 58.874 47.619 0.00 0.00 0.00 3.82
3809 4054 2.481104 CCAGTTCAAAAATGCCGTGTGT 60.481 45.455 0.00 0.00 0.00 3.72
3810 4055 2.535166 CAGTTCAAAAATGCCGTGTGTG 59.465 45.455 0.00 0.00 0.00 3.82
3811 4056 2.165437 AGTTCAAAAATGCCGTGTGTGT 59.835 40.909 0.00 0.00 0.00 3.72
3812 4057 2.483583 TCAAAAATGCCGTGTGTGTC 57.516 45.000 0.00 0.00 0.00 3.67
3813 4058 1.066303 TCAAAAATGCCGTGTGTGTCC 59.934 47.619 0.00 0.00 0.00 4.02
3814 4059 1.066908 CAAAAATGCCGTGTGTGTCCT 59.933 47.619 0.00 0.00 0.00 3.85
3815 4060 2.264005 AAAATGCCGTGTGTGTCCTA 57.736 45.000 0.00 0.00 0.00 2.94
3816 4061 2.264005 AAATGCCGTGTGTGTCCTAA 57.736 45.000 0.00 0.00 0.00 2.69
3817 4062 2.264005 AATGCCGTGTGTGTCCTAAA 57.736 45.000 0.00 0.00 0.00 1.85
3818 4063 1.808411 ATGCCGTGTGTGTCCTAAAG 58.192 50.000 0.00 0.00 0.00 1.85
3819 4064 0.882927 TGCCGTGTGTGTCCTAAAGC 60.883 55.000 0.00 0.00 0.00 3.51
3820 4065 0.602905 GCCGTGTGTGTCCTAAAGCT 60.603 55.000 0.00 0.00 0.00 3.74
3821 4066 1.337447 GCCGTGTGTGTCCTAAAGCTA 60.337 52.381 0.00 0.00 0.00 3.32
3822 4067 2.334838 CCGTGTGTGTCCTAAAGCTAC 58.665 52.381 0.00 0.00 0.00 3.58
3823 4068 2.334838 CGTGTGTGTCCTAAAGCTACC 58.665 52.381 0.00 0.00 0.00 3.18
3824 4069 2.288579 CGTGTGTGTCCTAAAGCTACCA 60.289 50.000 0.00 0.00 0.00 3.25
3825 4070 3.735591 GTGTGTGTCCTAAAGCTACCAA 58.264 45.455 0.00 0.00 0.00 3.67
3826 4071 4.131596 GTGTGTGTCCTAAAGCTACCAAA 58.868 43.478 0.00 0.00 0.00 3.28
3827 4072 4.577283 GTGTGTGTCCTAAAGCTACCAAAA 59.423 41.667 0.00 0.00 0.00 2.44
3828 4073 4.819630 TGTGTGTCCTAAAGCTACCAAAAG 59.180 41.667 0.00 0.00 0.00 2.27
3829 4074 3.818773 TGTGTCCTAAAGCTACCAAAAGC 59.181 43.478 0.00 0.00 43.11 3.51
3843 4088 4.861102 CCAAAAGCTGGTCTTCAAGAAT 57.139 40.909 0.00 0.00 40.78 2.40
3844 4089 5.205759 CCAAAAGCTGGTCTTCAAGAATT 57.794 39.130 0.00 0.00 40.78 2.17
3845 4090 5.604565 CCAAAAGCTGGTCTTCAAGAATTT 58.395 37.500 0.00 0.00 40.78 1.82
3846 4091 5.693555 CCAAAAGCTGGTCTTCAAGAATTTC 59.306 40.000 0.00 0.00 40.78 2.17
3847 4092 5.459536 AAAGCTGGTCTTCAAGAATTTCC 57.540 39.130 0.00 0.00 32.88 3.13
3848 4093 4.104383 AGCTGGTCTTCAAGAATTTCCA 57.896 40.909 0.00 0.00 0.00 3.53
3849 4094 4.670765 AGCTGGTCTTCAAGAATTTCCAT 58.329 39.130 0.00 0.00 0.00 3.41
3850 4095 5.082425 AGCTGGTCTTCAAGAATTTCCATT 58.918 37.500 0.00 0.00 0.00 3.16
3851 4096 6.248433 AGCTGGTCTTCAAGAATTTCCATTA 58.752 36.000 0.00 0.00 0.00 1.90
3852 4097 6.894103 AGCTGGTCTTCAAGAATTTCCATTAT 59.106 34.615 0.00 0.00 0.00 1.28
3853 4098 6.976925 GCTGGTCTTCAAGAATTTCCATTATG 59.023 38.462 0.00 0.00 0.00 1.90
3854 4099 7.363268 GCTGGTCTTCAAGAATTTCCATTATGT 60.363 37.037 0.00 0.00 0.00 2.29
3855 4100 8.421249 TGGTCTTCAAGAATTTCCATTATGTT 57.579 30.769 0.00 0.00 0.00 2.71
3856 4101 8.306038 TGGTCTTCAAGAATTTCCATTATGTTG 58.694 33.333 0.00 0.00 0.00 3.33
3857 4102 7.276438 GGTCTTCAAGAATTTCCATTATGTTGC 59.724 37.037 0.00 0.00 0.00 4.17
3858 4103 7.814107 GTCTTCAAGAATTTCCATTATGTTGCA 59.186 33.333 0.00 0.00 0.00 4.08
3859 4104 8.030692 TCTTCAAGAATTTCCATTATGTTGCAG 58.969 33.333 0.00 0.00 0.00 4.41
3860 4105 7.465353 TCAAGAATTTCCATTATGTTGCAGA 57.535 32.000 0.00 0.00 0.00 4.26
3861 4106 7.894708 TCAAGAATTTCCATTATGTTGCAGAA 58.105 30.769 0.00 0.00 0.00 3.02
3862 4107 8.366401 TCAAGAATTTCCATTATGTTGCAGAAA 58.634 29.630 0.00 0.00 0.00 2.52
3863 4108 8.991026 CAAGAATTTCCATTATGTTGCAGAAAA 58.009 29.630 0.00 0.00 0.00 2.29
3864 4109 9.729281 AAGAATTTCCATTATGTTGCAGAAAAT 57.271 25.926 0.00 0.00 0.00 1.82
3865 4110 9.729281 AGAATTTCCATTATGTTGCAGAAAATT 57.271 25.926 0.00 0.00 0.00 1.82
3875 4120 6.820470 TGTTGCAGAAAATTAAGAAAACGG 57.180 33.333 0.00 0.00 0.00 4.44
3876 4121 6.334202 TGTTGCAGAAAATTAAGAAAACGGT 58.666 32.000 0.00 0.00 0.00 4.83
3877 4122 6.814146 TGTTGCAGAAAATTAAGAAAACGGTT 59.186 30.769 0.00 0.00 0.00 4.44
3878 4123 7.974501 TGTTGCAGAAAATTAAGAAAACGGTTA 59.025 29.630 0.00 0.00 0.00 2.85
3879 4124 8.809478 GTTGCAGAAAATTAAGAAAACGGTTAA 58.191 29.630 0.00 0.00 0.00 2.01
3880 4125 9.535878 TTGCAGAAAATTAAGAAAACGGTTAAT 57.464 25.926 0.00 0.00 31.52 1.40
3881 4126 9.535878 TGCAGAAAATTAAGAAAACGGTTAATT 57.464 25.926 0.00 0.00 39.45 1.40
3892 4137 9.857957 AAGAAAACGGTTAATTAACTGAACAAA 57.142 25.926 33.71 0.00 43.54 2.83
3893 4138 9.857957 AGAAAACGGTTAATTAACTGAACAAAA 57.142 25.926 33.71 0.00 43.54 2.44
3912 4157 2.311124 AAATAGCACACCGGACTAGC 57.689 50.000 9.46 6.64 0.00 3.42
3913 4158 1.191535 AATAGCACACCGGACTAGCA 58.808 50.000 9.46 0.00 0.00 3.49
3914 4159 1.414158 ATAGCACACCGGACTAGCAT 58.586 50.000 9.46 0.77 0.00 3.79
3915 4160 0.459899 TAGCACACCGGACTAGCATG 59.540 55.000 9.46 0.00 0.00 4.06
3916 4161 1.079127 GCACACCGGACTAGCATGT 60.079 57.895 9.46 0.00 0.00 3.21
3917 4162 1.361668 GCACACCGGACTAGCATGTG 61.362 60.000 9.46 11.93 42.83 3.21
3918 4163 0.037326 CACACCGGACTAGCATGTGT 60.037 55.000 9.46 0.00 40.57 3.72
3919 4164 0.685097 ACACCGGACTAGCATGTGTT 59.315 50.000 9.46 0.00 36.84 3.32
3920 4165 1.337823 ACACCGGACTAGCATGTGTTC 60.338 52.381 9.46 0.00 36.84 3.18
3921 4166 1.066858 CACCGGACTAGCATGTGTTCT 60.067 52.381 9.46 0.00 0.00 3.01
3922 4167 2.165641 CACCGGACTAGCATGTGTTCTA 59.834 50.000 9.46 0.00 0.00 2.10
3923 4168 3.031736 ACCGGACTAGCATGTGTTCTAT 58.968 45.455 9.46 0.00 0.00 1.98
3924 4169 4.037565 CACCGGACTAGCATGTGTTCTATA 59.962 45.833 9.46 0.00 0.00 1.31
3925 4170 4.278669 ACCGGACTAGCATGTGTTCTATAG 59.721 45.833 9.46 0.00 0.00 1.31
3926 4171 4.230657 CGGACTAGCATGTGTTCTATAGC 58.769 47.826 0.00 0.00 0.00 2.97
3927 4172 4.022762 CGGACTAGCATGTGTTCTATAGCT 60.023 45.833 0.00 0.00 36.20 3.32
3928 4173 5.508153 CGGACTAGCATGTGTTCTATAGCTT 60.508 44.000 0.00 0.00 33.83 3.74
3929 4174 5.923684 GGACTAGCATGTGTTCTATAGCTTC 59.076 44.000 0.00 0.00 33.83 3.86
3930 4175 6.239176 GGACTAGCATGTGTTCTATAGCTTCT 60.239 42.308 0.00 0.00 33.83 2.85
3931 4176 6.511416 ACTAGCATGTGTTCTATAGCTTCTG 58.489 40.000 0.00 0.00 33.83 3.02
3932 4177 4.125703 AGCATGTGTTCTATAGCTTCTGC 58.874 43.478 0.00 0.00 40.05 4.26
3933 4178 3.873361 GCATGTGTTCTATAGCTTCTGCA 59.127 43.478 0.00 0.00 42.74 4.41
3934 4179 4.333649 GCATGTGTTCTATAGCTTCTGCAA 59.666 41.667 0.00 0.00 42.74 4.08
3935 4180 5.163723 GCATGTGTTCTATAGCTTCTGCAAA 60.164 40.000 0.00 0.00 42.74 3.68
3936 4181 6.484540 CATGTGTTCTATAGCTTCTGCAAAG 58.515 40.000 0.00 0.00 42.74 2.77
3937 4182 5.793817 TGTGTTCTATAGCTTCTGCAAAGA 58.206 37.500 11.34 0.00 42.74 2.52
3938 4183 6.230472 TGTGTTCTATAGCTTCTGCAAAGAA 58.770 36.000 11.34 1.22 42.74 2.52
3939 4184 6.710295 TGTGTTCTATAGCTTCTGCAAAGAAA 59.290 34.615 11.34 1.27 42.74 2.52
3940 4185 7.018235 GTGTTCTATAGCTTCTGCAAAGAAAC 58.982 38.462 11.34 0.00 42.74 2.78
3941 4186 6.149474 TGTTCTATAGCTTCTGCAAAGAAACC 59.851 38.462 11.34 0.00 42.74 3.27
3942 4187 6.054860 TCTATAGCTTCTGCAAAGAAACCT 57.945 37.500 11.34 4.18 42.74 3.50
3943 4188 6.476378 TCTATAGCTTCTGCAAAGAAACCTT 58.524 36.000 11.34 0.00 42.74 3.50
3944 4189 7.620880 TCTATAGCTTCTGCAAAGAAACCTTA 58.379 34.615 11.34 0.00 42.74 2.69
3945 4190 8.100791 TCTATAGCTTCTGCAAAGAAACCTTAA 58.899 33.333 11.34 0.00 42.74 1.85
3946 4191 5.852282 AGCTTCTGCAAAGAAACCTTAAA 57.148 34.783 11.34 0.00 42.74 1.52
3947 4192 6.220726 AGCTTCTGCAAAGAAACCTTAAAA 57.779 33.333 11.34 0.00 42.74 1.52
3948 4193 6.820335 AGCTTCTGCAAAGAAACCTTAAAAT 58.180 32.000 11.34 0.00 42.74 1.82
3949 4194 7.951591 AGCTTCTGCAAAGAAACCTTAAAATA 58.048 30.769 11.34 0.00 42.74 1.40
3950 4195 8.421002 AGCTTCTGCAAAGAAACCTTAAAATAA 58.579 29.630 11.34 0.00 42.74 1.40
3951 4196 8.703336 GCTTCTGCAAAGAAACCTTAAAATAAG 58.297 33.333 11.34 0.00 39.41 1.73
3952 4197 9.196552 CTTCTGCAAAGAAACCTTAAAATAAGG 57.803 33.333 13.35 13.35 43.05 2.69
3953 4198 7.151976 TCTGCAAAGAAACCTTAAAATAAGGC 58.848 34.615 14.57 1.22 41.10 4.35
3954 4199 5.923684 TGCAAAGAAACCTTAAAATAAGGCG 59.076 36.000 14.57 0.00 41.10 5.52
3955 4200 5.163992 GCAAAGAAACCTTAAAATAAGGCGC 60.164 40.000 14.57 0.00 41.10 6.53
3956 4201 5.977489 AAGAAACCTTAAAATAAGGCGCT 57.023 34.783 7.64 7.77 41.10 5.92
3957 4202 5.977489 AGAAACCTTAAAATAAGGCGCTT 57.023 34.783 7.64 0.00 41.10 4.68
3958 4203 5.950883 AGAAACCTTAAAATAAGGCGCTTC 58.049 37.500 7.64 13.80 41.10 3.86
3959 4204 4.713824 AACCTTAAAATAAGGCGCTTCC 57.286 40.909 7.64 0.00 41.10 3.46
3960 4205 3.021695 ACCTTAAAATAAGGCGCTTCCC 58.978 45.455 7.64 0.00 41.10 3.97
3961 4206 3.020984 CCTTAAAATAAGGCGCTTCCCA 58.979 45.455 7.64 0.00 34.51 4.37
3962 4207 3.636764 CCTTAAAATAAGGCGCTTCCCAT 59.363 43.478 7.64 0.00 34.51 4.00
3963 4208 4.099419 CCTTAAAATAAGGCGCTTCCCATT 59.901 41.667 7.64 0.00 34.51 3.16
3964 4209 3.801114 AAAATAAGGCGCTTCCCATTC 57.199 42.857 7.64 0.00 34.51 2.67
3965 4210 2.435372 AATAAGGCGCTTCCCATTCA 57.565 45.000 7.64 0.00 34.51 2.57
3966 4211 1.680338 ATAAGGCGCTTCCCATTCAC 58.320 50.000 7.64 0.00 34.51 3.18
3967 4212 0.326595 TAAGGCGCTTCCCATTCACA 59.673 50.000 7.64 0.00 34.51 3.58
3968 4213 0.323725 AAGGCGCTTCCCATTCACAT 60.324 50.000 7.64 0.00 34.51 3.21
3969 4214 0.323725 AGGCGCTTCCCATTCACATT 60.324 50.000 7.64 0.00 34.51 2.71
3970 4215 0.532115 GGCGCTTCCCATTCACATTT 59.468 50.000 7.64 0.00 0.00 2.32
3971 4216 1.748493 GGCGCTTCCCATTCACATTTA 59.252 47.619 7.64 0.00 0.00 1.40
3972 4217 2.165437 GGCGCTTCCCATTCACATTTAA 59.835 45.455 7.64 0.00 0.00 1.52
3973 4218 3.179048 GCGCTTCCCATTCACATTTAAC 58.821 45.455 0.00 0.00 0.00 2.01
3974 4219 3.366883 GCGCTTCCCATTCACATTTAACA 60.367 43.478 0.00 0.00 0.00 2.41
3975 4220 4.804108 CGCTTCCCATTCACATTTAACAA 58.196 39.130 0.00 0.00 0.00 2.83
3976 4221 4.621034 CGCTTCCCATTCACATTTAACAAC 59.379 41.667 0.00 0.00 0.00 3.32
3977 4222 4.929211 GCTTCCCATTCACATTTAACAACC 59.071 41.667 0.00 0.00 0.00 3.77
3978 4223 5.510520 GCTTCCCATTCACATTTAACAACCA 60.511 40.000 0.00 0.00 0.00 3.67
3979 4224 6.678568 TTCCCATTCACATTTAACAACCAT 57.321 33.333 0.00 0.00 0.00 3.55
3980 4225 7.578571 GCTTCCCATTCACATTTAACAACCATA 60.579 37.037 0.00 0.00 0.00 2.74
3981 4226 7.164230 TCCCATTCACATTTAACAACCATAC 57.836 36.000 0.00 0.00 0.00 2.39
3982 4227 6.721668 TCCCATTCACATTTAACAACCATACA 59.278 34.615 0.00 0.00 0.00 2.29
3983 4228 7.233553 TCCCATTCACATTTAACAACCATACAA 59.766 33.333 0.00 0.00 0.00 2.41
3984 4229 7.545265 CCCATTCACATTTAACAACCATACAAG 59.455 37.037 0.00 0.00 0.00 3.16
3985 4230 8.303156 CCATTCACATTTAACAACCATACAAGA 58.697 33.333 0.00 0.00 0.00 3.02
3986 4231 9.689976 CATTCACATTTAACAACCATACAAGAA 57.310 29.630 0.00 0.00 0.00 2.52
3987 4232 9.912634 ATTCACATTTAACAACCATACAAGAAG 57.087 29.630 0.00 0.00 0.00 2.85
3988 4233 8.684386 TCACATTTAACAACCATACAAGAAGA 57.316 30.769 0.00 0.00 0.00 2.87
3989 4234 9.126151 TCACATTTAACAACCATACAAGAAGAA 57.874 29.630 0.00 0.00 0.00 2.52
3990 4235 9.912634 CACATTTAACAACCATACAAGAAGAAT 57.087 29.630 0.00 0.00 0.00 2.40
3996 4241 8.408043 AACAACCATACAAGAAGAATTGATCA 57.592 30.769 0.00 0.00 34.20 2.92
3997 4242 8.408043 ACAACCATACAAGAAGAATTGATCAA 57.592 30.769 11.26 11.26 34.20 2.57
3998 4243 8.299570 ACAACCATACAAGAAGAATTGATCAAC 58.700 33.333 11.07 0.00 34.20 3.18
3999 4244 7.076842 ACCATACAAGAAGAATTGATCAACG 57.923 36.000 11.07 0.00 34.20 4.10
4000 4245 6.878923 ACCATACAAGAAGAATTGATCAACGA 59.121 34.615 11.07 0.00 34.20 3.85
4001 4246 7.390440 ACCATACAAGAAGAATTGATCAACGAA 59.610 33.333 11.07 0.00 34.20 3.85
4002 4247 8.236586 CCATACAAGAAGAATTGATCAACGAAA 58.763 33.333 11.07 0.00 34.20 3.46
4003 4248 9.270576 CATACAAGAAGAATTGATCAACGAAAG 57.729 33.333 11.07 0.00 34.20 2.62
4004 4249 6.145535 ACAAGAAGAATTGATCAACGAAAGC 58.854 36.000 11.07 0.00 34.20 3.51
4005 4250 5.947228 AGAAGAATTGATCAACGAAAGCA 57.053 34.783 11.07 0.00 0.00 3.91
4006 4251 5.693814 AGAAGAATTGATCAACGAAAGCAC 58.306 37.500 11.07 0.00 0.00 4.40
4007 4252 5.239306 AGAAGAATTGATCAACGAAAGCACA 59.761 36.000 11.07 0.00 0.00 4.57
4008 4253 5.437289 AGAATTGATCAACGAAAGCACAA 57.563 34.783 11.07 0.00 0.00 3.33
4009 4254 5.215160 AGAATTGATCAACGAAAGCACAAC 58.785 37.500 11.07 0.00 0.00 3.32
4010 4255 2.661504 TGATCAACGAAAGCACAACG 57.338 45.000 0.00 0.00 0.00 4.10
4011 4256 1.937223 TGATCAACGAAAGCACAACGT 59.063 42.857 0.00 0.00 41.97 3.99
4012 4257 2.286125 TGATCAACGAAAGCACAACGTG 60.286 45.455 0.00 0.00 40.10 4.49
4013 4258 1.360820 TCAACGAAAGCACAACGTGA 58.639 45.000 0.00 0.00 40.10 4.35
4014 4259 1.326245 TCAACGAAAGCACAACGTGAG 59.674 47.619 0.00 0.00 40.10 3.51
4015 4260 0.027586 AACGAAAGCACAACGTGAGC 59.972 50.000 0.00 0.00 40.10 4.26
4016 4261 1.437089 CGAAAGCACAACGTGAGCG 60.437 57.895 0.00 0.00 38.98 5.03
4017 4262 1.082756 GAAAGCACAACGTGAGCGG 60.083 57.895 0.00 0.00 38.98 5.52
4018 4263 2.443957 GAAAGCACAACGTGAGCGGG 62.444 60.000 0.00 0.00 38.98 6.13
4019 4264 3.750373 AAGCACAACGTGAGCGGGT 62.750 57.895 0.00 0.00 38.98 5.28
4020 4265 4.012895 GCACAACGTGAGCGGGTG 62.013 66.667 0.00 8.80 44.52 4.61
4021 4266 2.279851 CACAACGTGAGCGGGTGA 60.280 61.111 0.00 0.00 44.49 4.02
4022 4267 1.885388 CACAACGTGAGCGGGTGAA 60.885 57.895 0.00 0.00 44.49 3.18
4023 4268 1.594293 ACAACGTGAGCGGGTGAAG 60.594 57.895 0.00 0.00 43.45 3.02
4024 4269 2.030562 AACGTGAGCGGGTGAAGG 59.969 61.111 0.00 0.00 43.45 3.46
4025 4270 2.504274 AACGTGAGCGGGTGAAGGA 61.504 57.895 0.00 0.00 43.45 3.36
4026 4271 2.035237 AACGTGAGCGGGTGAAGGAA 62.035 55.000 0.00 0.00 43.45 3.36
4027 4272 1.301401 CGTGAGCGGGTGAAGGAAA 60.301 57.895 0.00 0.00 0.00 3.13
4028 4273 0.673644 CGTGAGCGGGTGAAGGAAAT 60.674 55.000 0.00 0.00 0.00 2.17
4029 4274 0.804989 GTGAGCGGGTGAAGGAAATG 59.195 55.000 0.00 0.00 0.00 2.32
4030 4275 0.690192 TGAGCGGGTGAAGGAAATGA 59.310 50.000 0.00 0.00 0.00 2.57
4031 4276 1.339055 TGAGCGGGTGAAGGAAATGAG 60.339 52.381 0.00 0.00 0.00 2.90
4032 4277 0.984230 AGCGGGTGAAGGAAATGAGA 59.016 50.000 0.00 0.00 0.00 3.27
4033 4278 1.351017 AGCGGGTGAAGGAAATGAGAA 59.649 47.619 0.00 0.00 0.00 2.87
4034 4279 2.159382 GCGGGTGAAGGAAATGAGAAA 58.841 47.619 0.00 0.00 0.00 2.52
4035 4280 2.095212 GCGGGTGAAGGAAATGAGAAAC 60.095 50.000 0.00 0.00 0.00 2.78
4036 4281 3.146066 CGGGTGAAGGAAATGAGAAACA 58.854 45.455 0.00 0.00 0.00 2.83
4037 4282 3.568007 CGGGTGAAGGAAATGAGAAACAA 59.432 43.478 0.00 0.00 0.00 2.83
4038 4283 4.556699 CGGGTGAAGGAAATGAGAAACAAC 60.557 45.833 0.00 0.00 0.00 3.32
4039 4284 4.340950 GGGTGAAGGAAATGAGAAACAACA 59.659 41.667 0.00 0.00 0.00 3.33
4040 4285 5.163457 GGGTGAAGGAAATGAGAAACAACAA 60.163 40.000 0.00 0.00 0.00 2.83
4041 4286 6.337356 GGTGAAGGAAATGAGAAACAACAAA 58.663 36.000 0.00 0.00 0.00 2.83
4042 4287 6.255670 GGTGAAGGAAATGAGAAACAACAAAC 59.744 38.462 0.00 0.00 0.00 2.93
4043 4288 6.811170 GTGAAGGAAATGAGAAACAACAAACA 59.189 34.615 0.00 0.00 0.00 2.83
4044 4289 7.009540 GTGAAGGAAATGAGAAACAACAAACAG 59.990 37.037 0.00 0.00 0.00 3.16
4045 4290 6.773976 AGGAAATGAGAAACAACAAACAGA 57.226 33.333 0.00 0.00 0.00 3.41
4046 4291 7.169158 AGGAAATGAGAAACAACAAACAGAA 57.831 32.000 0.00 0.00 0.00 3.02
4047 4292 7.610865 AGGAAATGAGAAACAACAAACAGAAA 58.389 30.769 0.00 0.00 0.00 2.52
4048 4293 8.260114 AGGAAATGAGAAACAACAAACAGAAAT 58.740 29.630 0.00 0.00 0.00 2.17
4049 4294 8.330302 GGAAATGAGAAACAACAAACAGAAATG 58.670 33.333 0.00 0.00 0.00 2.32
4050 4295 9.086336 GAAATGAGAAACAACAAACAGAAATGA 57.914 29.630 0.00 0.00 0.00 2.57
4051 4296 7.992180 ATGAGAAACAACAAACAGAAATGAC 57.008 32.000 0.00 0.00 0.00 3.06
4052 4297 6.918626 TGAGAAACAACAAACAGAAATGACA 58.081 32.000 0.00 0.00 0.00 3.58
4053 4298 7.374272 TGAGAAACAACAAACAGAAATGACAA 58.626 30.769 0.00 0.00 0.00 3.18
4054 4299 8.034215 TGAGAAACAACAAACAGAAATGACAAT 58.966 29.630 0.00 0.00 0.00 2.71
4055 4300 8.776376 AGAAACAACAAACAGAAATGACAATT 57.224 26.923 0.00 0.00 0.00 2.32
4056 4301 9.868277 AGAAACAACAAACAGAAATGACAATTA 57.132 25.926 0.00 0.00 0.00 1.40
4058 4303 9.868277 AAACAACAAACAGAAATGACAATTAGA 57.132 25.926 0.00 0.00 0.00 2.10
4060 4305 9.467258 ACAACAAACAGAAATGACAATTAGATG 57.533 29.630 0.00 0.00 0.00 2.90
4061 4306 9.467258 CAACAAACAGAAATGACAATTAGATGT 57.533 29.630 0.00 0.00 35.90 3.06
4067 4312 9.466497 ACAGAAATGACAATTAGATGTTATGGT 57.534 29.630 0.00 0.00 30.80 3.55
4070 4315 9.438291 GAAATGACAATTAGATGTTATGGTTCG 57.562 33.333 0.00 0.00 30.80 3.95
4071 4316 8.506168 AATGACAATTAGATGTTATGGTTCGT 57.494 30.769 0.00 0.00 30.80 3.85
4072 4317 7.302350 TGACAATTAGATGTTATGGTTCGTG 57.698 36.000 0.00 0.00 32.57 4.35
4073 4318 6.315144 TGACAATTAGATGTTATGGTTCGTGG 59.685 38.462 0.00 0.00 32.57 4.94
4074 4319 6.177610 ACAATTAGATGTTATGGTTCGTGGT 58.822 36.000 0.00 0.00 0.00 4.16
4075 4320 6.093495 ACAATTAGATGTTATGGTTCGTGGTG 59.907 38.462 0.00 0.00 0.00 4.17
4076 4321 2.985896 AGATGTTATGGTTCGTGGTGG 58.014 47.619 0.00 0.00 0.00 4.61
4077 4322 2.304761 AGATGTTATGGTTCGTGGTGGT 59.695 45.455 0.00 0.00 0.00 4.16
4078 4323 1.885560 TGTTATGGTTCGTGGTGGTG 58.114 50.000 0.00 0.00 0.00 4.17
4079 4324 0.519961 GTTATGGTTCGTGGTGGTGC 59.480 55.000 0.00 0.00 0.00 5.01
4080 4325 0.606944 TTATGGTTCGTGGTGGTGCC 60.607 55.000 0.00 0.00 37.90 5.01
4081 4326 1.769716 TATGGTTCGTGGTGGTGCCA 61.770 55.000 0.00 0.00 46.95 4.92
4089 4334 1.973760 TGGTGGTGCCAAATGATGC 59.026 52.632 0.00 0.00 45.94 3.91
4090 4335 0.542467 TGGTGGTGCCAAATGATGCT 60.542 50.000 0.00 0.00 45.94 3.79
4091 4336 1.272369 TGGTGGTGCCAAATGATGCTA 60.272 47.619 0.00 0.00 45.94 3.49
4092 4337 1.406539 GGTGGTGCCAAATGATGCTAG 59.593 52.381 0.00 0.00 37.17 3.42
4093 4338 1.105457 TGGTGCCAAATGATGCTAGC 58.895 50.000 8.10 8.10 0.00 3.42
4094 4339 1.105457 GGTGCCAAATGATGCTAGCA 58.895 50.000 21.85 21.85 0.00 3.49
4095 4340 2.199291 GTGCCAAATGATGCTAGCAC 57.801 50.000 22.07 14.47 43.14 4.40
4096 4341 1.836802 TGCCAAATGATGCTAGCACA 58.163 45.000 22.07 19.63 0.00 4.57
4097 4342 2.169330 TGCCAAATGATGCTAGCACAA 58.831 42.857 22.07 11.88 0.00 3.33
4098 4343 2.561858 TGCCAAATGATGCTAGCACAAA 59.438 40.909 22.07 9.03 0.00 2.83
4099 4344 2.925563 GCCAAATGATGCTAGCACAAAC 59.074 45.455 22.07 12.31 0.00 2.93
4100 4345 3.614630 GCCAAATGATGCTAGCACAAACA 60.615 43.478 22.07 17.43 0.00 2.83
4101 4346 4.558178 CCAAATGATGCTAGCACAAACAA 58.442 39.130 22.07 2.34 0.00 2.83
4102 4347 4.386652 CCAAATGATGCTAGCACAAACAAC 59.613 41.667 22.07 6.36 0.00 3.32
4103 4348 4.852134 AATGATGCTAGCACAAACAACA 57.148 36.364 22.07 11.60 0.00 3.33
4104 4349 5.395682 AATGATGCTAGCACAAACAACAT 57.604 34.783 22.07 13.22 0.00 2.71
4105 4350 4.163458 TGATGCTAGCACAAACAACATG 57.837 40.909 22.07 0.00 0.00 3.21
4106 4351 3.569277 TGATGCTAGCACAAACAACATGT 59.431 39.130 22.07 0.00 0.00 3.21
4107 4352 4.037803 TGATGCTAGCACAAACAACATGTT 59.962 37.500 22.07 4.92 43.41 2.71
4108 4353 5.240403 TGATGCTAGCACAAACAACATGTTA 59.760 36.000 22.07 0.00 40.14 2.41
4109 4354 5.107109 TGCTAGCACAAACAACATGTTAG 57.893 39.130 14.93 8.48 40.14 2.34
4110 4355 3.914364 GCTAGCACAAACAACATGTTAGC 59.086 43.478 11.53 9.47 40.14 3.09
4111 4356 4.556501 GCTAGCACAAACAACATGTTAGCA 60.557 41.667 11.53 0.00 46.44 3.49
4112 4357 4.589216 AGCACAAACAACATGTTAGCAT 57.411 36.364 11.53 0.00 40.14 3.79
4113 4358 5.703978 AGCACAAACAACATGTTAGCATA 57.296 34.783 11.53 0.00 40.14 3.14
4114 4359 5.460646 AGCACAAACAACATGTTAGCATAC 58.539 37.500 11.53 0.00 40.14 2.39
4115 4360 5.009510 AGCACAAACAACATGTTAGCATACA 59.990 36.000 11.53 0.00 40.14 2.29
4116 4361 5.343058 GCACAAACAACATGTTAGCATACAG 59.657 40.000 11.53 0.00 40.14 2.74
4117 4362 6.667370 CACAAACAACATGTTAGCATACAGA 58.333 36.000 11.53 0.00 40.14 3.41
4118 4363 6.798476 CACAAACAACATGTTAGCATACAGAG 59.202 38.462 11.53 0.00 40.14 3.35
4119 4364 6.486657 ACAAACAACATGTTAGCATACAGAGT 59.513 34.615 11.53 0.00 40.14 3.24
4120 4365 6.486253 AACAACATGTTAGCATACAGAGTG 57.514 37.500 11.53 0.00 39.09 3.51
4121 4366 5.551233 ACAACATGTTAGCATACAGAGTGT 58.449 37.500 11.53 0.00 33.30 3.55
4122 4367 5.409520 ACAACATGTTAGCATACAGAGTGTG 59.590 40.000 11.53 0.00 33.30 3.82
4123 4368 5.152623 ACATGTTAGCATACAGAGTGTGT 57.847 39.130 0.00 0.00 43.86 3.72
4124 4369 4.931601 ACATGTTAGCATACAGAGTGTGTG 59.068 41.667 2.58 0.00 41.59 3.82
4125 4370 3.925379 TGTTAGCATACAGAGTGTGTGG 58.075 45.455 2.58 0.00 39.47 4.17
4126 4371 3.262420 GTTAGCATACAGAGTGTGTGGG 58.738 50.000 2.58 0.00 39.47 4.61
4127 4372 0.036010 AGCATACAGAGTGTGTGGGC 60.036 55.000 2.58 6.60 39.47 5.36
4128 4373 1.361668 GCATACAGAGTGTGTGGGCG 61.362 60.000 2.58 0.00 39.47 6.13
4129 4374 1.079127 ATACAGAGTGTGTGGGCGC 60.079 57.895 2.58 0.00 40.69 6.53
4130 4375 2.835701 ATACAGAGTGTGTGGGCGCG 62.836 60.000 0.00 0.00 40.69 6.86
4131 4376 4.969196 CAGAGTGTGTGGGCGCGT 62.969 66.667 8.43 0.00 0.00 6.01
4132 4377 4.969196 AGAGTGTGTGGGCGCGTG 62.969 66.667 8.43 0.00 0.00 5.34
4141 4386 4.241999 GGGCGCGTGTGCATGATC 62.242 66.667 8.43 0.00 42.97 2.92
4142 4387 3.498834 GGCGCGTGTGCATGATCA 61.499 61.111 8.43 0.00 42.97 2.92
4143 4388 2.276868 GCGCGTGTGCATGATCAC 60.277 61.111 8.43 3.69 42.97 3.06
4144 4389 2.400798 CGCGTGTGCATGATCACC 59.599 61.111 0.00 0.00 42.97 4.02
4145 4390 2.400798 GCGTGTGCATGATCACCG 59.599 61.111 0.00 3.72 42.15 4.94
4146 4391 2.400798 CGTGTGCATGATCACCGC 59.599 61.111 11.21 11.21 36.17 5.68
4147 4392 2.400798 GTGTGCATGATCACCGCG 59.599 61.111 12.85 0.00 36.17 6.46
4148 4393 3.498834 TGTGCATGATCACCGCGC 61.499 61.111 20.34 20.34 36.17 6.86
4149 4394 4.241999 GTGCATGATCACCGCGCC 62.242 66.667 17.64 6.87 0.00 6.53
4150 4395 4.471908 TGCATGATCACCGCGCCT 62.472 61.111 0.00 0.00 0.00 5.52
4151 4396 3.945434 GCATGATCACCGCGCCTG 61.945 66.667 0.00 0.00 0.00 4.85
4152 4397 2.512286 CATGATCACCGCGCCTGT 60.512 61.111 0.00 0.00 0.00 4.00
4153 4398 1.227234 CATGATCACCGCGCCTGTA 60.227 57.895 0.00 0.00 0.00 2.74
4154 4399 1.227263 ATGATCACCGCGCCTGTAC 60.227 57.895 0.00 0.00 0.00 2.90
4155 4400 2.954020 ATGATCACCGCGCCTGTACG 62.954 60.000 0.00 0.00 0.00 3.67
4156 4401 3.695022 GATCACCGCGCCTGTACGT 62.695 63.158 0.00 0.00 34.88 3.57
4157 4402 3.982372 ATCACCGCGCCTGTACGTG 62.982 63.158 0.00 1.11 42.99 4.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 8.331022 CGAGAAAATCCATGAATTACAGTAGTG 58.669 37.037 0.00 0.00 0.00 2.74
107 108 3.719268 ACAACATCTGGATGCCTGTTA 57.281 42.857 10.13 0.00 42.39 2.41
170 171 1.342819 AGCTCTGTCGCTTCTTTCAGT 59.657 47.619 0.00 0.00 36.74 3.41
230 231 5.886992 TGTATCACTGTCCTGTATGTAACG 58.113 41.667 0.00 0.00 0.00 3.18
606 607 9.495572 CAGAAGACCTCTTTCTACAAACTTAAT 57.504 33.333 0.00 0.00 36.11 1.40
615 616 7.210873 TCTTGTTTCAGAAGACCTCTTTCTAC 58.789 38.462 0.00 0.00 36.11 2.59
672 680 5.507817 CCAGTTGCCAATAAACGCATGATAT 60.508 40.000 0.00 0.00 34.35 1.63
680 688 2.288152 ACTTGCCAGTTGCCAATAAACG 60.288 45.455 0.00 0.00 40.16 3.60
735 826 3.922240 GCTTTCCAGCATGTAAACACATG 59.078 43.478 12.34 12.34 46.49 3.21
736 827 4.178545 GCTTTCCAGCATGTAAACACAT 57.821 40.909 0.00 0.00 46.49 3.21
737 828 3.641437 GCTTTCCAGCATGTAAACACA 57.359 42.857 0.00 0.00 46.49 3.72
834 928 2.010145 TTCGCTGGCAGCTAACTAAG 57.990 50.000 34.17 18.49 39.60 2.18
836 930 2.956333 TCTATTCGCTGGCAGCTAACTA 59.044 45.455 34.17 20.97 39.60 2.24
837 931 1.757118 TCTATTCGCTGGCAGCTAACT 59.243 47.619 34.17 20.98 39.60 2.24
838 932 1.861575 GTCTATTCGCTGGCAGCTAAC 59.138 52.381 34.17 16.54 39.60 2.34
839 933 1.757118 AGTCTATTCGCTGGCAGCTAA 59.243 47.619 34.17 29.97 39.60 3.09
840 934 1.403814 AGTCTATTCGCTGGCAGCTA 58.596 50.000 34.17 23.45 39.60 3.32
841 935 1.339610 CTAGTCTATTCGCTGGCAGCT 59.660 52.381 34.17 20.17 39.60 4.24
844 938 2.885266 CCTACTAGTCTATTCGCTGGCA 59.115 50.000 0.00 0.00 0.00 4.92
851 966 6.270156 GGTGCCATACCTACTAGTCTATTC 57.730 45.833 0.00 0.00 46.51 1.75
981 1096 4.037927 CCATTGTCTCCTCCCCTTAAGTA 58.962 47.826 0.97 0.00 0.00 2.24
1014 1129 4.961511 GGCGCCGTCACAGTGTCA 62.962 66.667 12.58 0.00 0.00 3.58
1206 1321 0.889186 GGTGGCCAACGAACATCTGT 60.889 55.000 7.24 0.00 0.00 3.41
1309 1424 5.730296 ACTACATAGTGCAAGAACTGAGT 57.270 39.130 0.00 0.00 34.72 3.41
1313 1428 7.780745 AGGACTATACTACATAGTGCAAGAACT 59.219 37.037 15.41 0.00 42.86 3.01
1510 1625 4.221041 GCCAGAGTACCAGTAGAAGAAAGT 59.779 45.833 0.00 0.00 0.00 2.66
1704 1819 2.428530 CGAGATGAGGATGTGGAAGACA 59.571 50.000 0.00 0.00 39.53 3.41
1737 1852 0.519077 GGCCAAAGCTGAGAACGAAG 59.481 55.000 0.00 0.00 39.73 3.79
1861 1976 1.159285 CTGAAAGCGAGCATGGACAA 58.841 50.000 0.00 0.00 0.00 3.18
1896 2011 3.673484 GCAAAGGCGAGCTTGGCA 61.673 61.111 27.85 0.00 36.77 4.92
1911 2026 0.527600 CTAGCATAACAGCCGACGCA 60.528 55.000 0.00 0.00 37.52 5.24
1954 2069 3.188667 GCAAGACCTACCAAACAGTTAGC 59.811 47.826 0.00 0.00 0.00 3.09
1970 2089 4.858935 TGCAAGACATAAACAAGCAAGAC 58.141 39.130 0.00 0.00 0.00 3.01
1995 2114 4.401022 TCCAATCTGAGCAAGAACACAAT 58.599 39.130 0.00 0.00 38.79 2.71
2069 2188 4.768583 AGAGTGAATCAAGAGCAATCTCC 58.231 43.478 0.00 0.00 40.22 3.71
2102 2221 0.745845 AGCTGAATCATCGTGTGGCC 60.746 55.000 0.00 0.00 0.00 5.36
2110 2229 9.481340 TGTAACTATAACATGAGCTGAATCATC 57.519 33.333 0.00 0.00 37.84 2.92
2121 2240 7.389330 CCAACAAGGTGTGTAACTATAACATGA 59.611 37.037 0.00 0.00 40.60 3.07
2140 2259 8.669243 GGATTAGACATTAGAACTTCCAACAAG 58.331 37.037 0.00 0.00 0.00 3.16
2141 2260 8.160765 TGGATTAGACATTAGAACTTCCAACAA 58.839 33.333 0.00 0.00 0.00 2.83
2142 2261 7.685481 TGGATTAGACATTAGAACTTCCAACA 58.315 34.615 0.00 0.00 0.00 3.33
2182 2316 4.106029 AGTAAAAGAGATAGCGACGCAA 57.894 40.909 23.70 0.00 0.00 4.85
2186 2320 7.347508 TGAAACAAGTAAAAGAGATAGCGAC 57.652 36.000 0.00 0.00 0.00 5.19
2200 2335 5.700832 CCAGTAGTTGATGCTGAAACAAGTA 59.299 40.000 0.00 0.00 43.81 2.24
2287 2422 7.365295 GGAAATTGGTCTACATCTTGGTAGGTA 60.365 40.741 0.00 0.00 40.88 3.08
2627 2785 5.348164 ACGAATTTTCAGTTCCTTTGGTTG 58.652 37.500 0.00 0.00 0.00 3.77
2638 2796 7.965107 GCAGATATTTCAGAACGAATTTTCAGT 59.035 33.333 0.00 0.00 32.32 3.41
2659 2817 3.005539 ACGGCCACTCCTGCAGAT 61.006 61.111 17.39 0.00 0.00 2.90
2713 2871 1.855295 TGATGTAGTAAGCCCCGACA 58.145 50.000 0.00 0.00 0.00 4.35
2737 2895 1.078497 AACGCATCCGATTGGCAGA 60.078 52.632 0.00 0.00 38.29 4.26
2818 2976 6.166982 GTTGCAAGATAGAGGTTAACTGACT 58.833 40.000 0.00 5.45 0.00 3.41
2819 2977 5.932303 TGTTGCAAGATAGAGGTTAACTGAC 59.068 40.000 0.00 0.00 0.00 3.51
2868 3038 4.044065 TCCCCTGAGAATTACCACAAACAT 59.956 41.667 0.00 0.00 0.00 2.71
2968 3138 2.817396 GGCAAGCTCACCTCGCTC 60.817 66.667 0.00 0.00 36.56 5.03
2982 3152 0.313672 GCGTGAATGTGAAAAGGGCA 59.686 50.000 0.00 0.00 0.00 5.36
2992 3162 1.575244 CCGAGATCATGCGTGAATGT 58.425 50.000 13.65 0.00 38.01 2.71
3076 3256 2.743928 GCCTTCTCCACCTGCACG 60.744 66.667 0.00 0.00 0.00 5.34
3229 3415 1.950909 CAGCTACTACTTCCCTCCTCG 59.049 57.143 0.00 0.00 0.00 4.63
3458 3695 1.864669 ATTTGGGGGCGTCATCAAAT 58.135 45.000 12.10 12.10 35.69 2.32
3559 3803 3.526385 GCAATAGGCATCATGTACGTG 57.474 47.619 8.90 8.90 43.97 4.49
3612 3857 3.146828 AACGGAGGGGGCAGCTTTT 62.147 57.895 0.00 0.00 0.00 2.27
3632 3877 7.133891 AGACAAATCCAAGACAAGTAATTCG 57.866 36.000 0.00 0.00 0.00 3.34
3633 3878 9.436957 TCTAGACAAATCCAAGACAAGTAATTC 57.563 33.333 0.00 0.00 0.00 2.17
3639 3884 7.819415 TGTGTATCTAGACAAATCCAAGACAAG 59.181 37.037 0.00 0.00 0.00 3.16
3640 3885 7.676004 TGTGTATCTAGACAAATCCAAGACAA 58.324 34.615 0.00 0.00 0.00 3.18
3641 3886 7.239763 TGTGTATCTAGACAAATCCAAGACA 57.760 36.000 0.00 0.00 0.00 3.41
3642 3887 8.359060 GATGTGTATCTAGACAAATCCAAGAC 57.641 38.462 0.00 0.00 37.89 3.01
3648 3893 8.676454 GATACGGATGTGTATCTAGACAAATC 57.324 38.462 0.00 0.14 44.68 2.17
3659 3904 8.410673 AAATGAGTCTAGATACGGATGTGTAT 57.589 34.615 0.00 0.00 37.74 2.29
3660 3905 7.818997 AAATGAGTCTAGATACGGATGTGTA 57.181 36.000 0.00 0.00 0.00 2.90
3661 3906 6.716934 AAATGAGTCTAGATACGGATGTGT 57.283 37.500 0.00 0.00 0.00 3.72
3662 3907 7.203218 TCAAAATGAGTCTAGATACGGATGTG 58.797 38.462 0.00 0.00 0.00 3.21
3663 3908 7.348080 TCAAAATGAGTCTAGATACGGATGT 57.652 36.000 0.00 0.00 0.00 3.06
3664 3909 7.148672 GCATCAAAATGAGTCTAGATACGGATG 60.149 40.741 0.00 3.76 34.61 3.51
3665 3910 6.870965 GCATCAAAATGAGTCTAGATACGGAT 59.129 38.462 0.00 0.00 34.61 4.18
3666 3911 6.040955 AGCATCAAAATGAGTCTAGATACGGA 59.959 38.462 0.00 0.00 34.61 4.69
3667 3912 6.219473 AGCATCAAAATGAGTCTAGATACGG 58.781 40.000 0.00 0.00 34.61 4.02
3668 3913 8.293157 TCTAGCATCAAAATGAGTCTAGATACG 58.707 37.037 13.06 0.00 36.87 3.06
3672 3917 9.360901 AGTATCTAGCATCAAAATGAGTCTAGA 57.639 33.333 16.63 16.63 41.27 2.43
3673 3918 9.979578 AAGTATCTAGCATCAAAATGAGTCTAG 57.020 33.333 10.16 10.16 35.45 2.43
3674 3919 9.973450 GAAGTATCTAGCATCAAAATGAGTCTA 57.027 33.333 0.00 0.00 34.61 2.59
3675 3920 8.703743 AGAAGTATCTAGCATCAAAATGAGTCT 58.296 33.333 0.00 0.00 32.17 3.24
3676 3921 8.763356 CAGAAGTATCTAGCATCAAAATGAGTC 58.237 37.037 0.00 0.00 32.50 3.36
3677 3922 8.263640 ACAGAAGTATCTAGCATCAAAATGAGT 58.736 33.333 0.00 0.00 32.50 3.41
3678 3923 8.659925 ACAGAAGTATCTAGCATCAAAATGAG 57.340 34.615 0.00 0.00 32.50 2.90
3707 3952 9.582431 CCGAATTACTTGTCTTAGATTTGTCTA 57.418 33.333 0.00 0.00 0.00 2.59
3708 3953 8.311836 TCCGAATTACTTGTCTTAGATTTGTCT 58.688 33.333 0.00 0.00 0.00 3.41
3709 3954 8.475331 TCCGAATTACTTGTCTTAGATTTGTC 57.525 34.615 0.00 0.00 0.00 3.18
3710 3955 8.718734 GTTCCGAATTACTTGTCTTAGATTTGT 58.281 33.333 0.00 0.00 0.00 2.83
3711 3956 7.898309 CGTTCCGAATTACTTGTCTTAGATTTG 59.102 37.037 0.00 0.00 0.00 2.32
3712 3957 7.064253 CCGTTCCGAATTACTTGTCTTAGATTT 59.936 37.037 0.00 0.00 0.00 2.17
3713 3958 6.534079 CCGTTCCGAATTACTTGTCTTAGATT 59.466 38.462 0.00 0.00 0.00 2.40
3714 3959 6.040878 CCGTTCCGAATTACTTGTCTTAGAT 58.959 40.000 0.00 0.00 0.00 1.98
3715 3960 5.183713 TCCGTTCCGAATTACTTGTCTTAGA 59.816 40.000 0.00 0.00 0.00 2.10
3716 3961 5.404946 TCCGTTCCGAATTACTTGTCTTAG 58.595 41.667 0.00 0.00 0.00 2.18
3717 3962 5.389859 TCCGTTCCGAATTACTTGTCTTA 57.610 39.130 0.00 0.00 0.00 2.10
3718 3963 4.243270 CTCCGTTCCGAATTACTTGTCTT 58.757 43.478 0.00 0.00 0.00 3.01
3719 3964 3.368116 CCTCCGTTCCGAATTACTTGTCT 60.368 47.826 0.00 0.00 0.00 3.41
3720 3965 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
3721 3966 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
3722 3967 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
3723 3968 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
3724 3969 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
3725 3970 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
3726 3971 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
3727 3972 1.755380 CTACTCCCTCCGTTCCGAATT 59.245 52.381 0.00 0.00 0.00 2.17
3728 3973 1.400737 CTACTCCCTCCGTTCCGAAT 58.599 55.000 0.00 0.00 0.00 3.34
3729 3974 0.682209 CCTACTCCCTCCGTTCCGAA 60.682 60.000 0.00 0.00 0.00 4.30
3730 3975 1.077212 CCTACTCCCTCCGTTCCGA 60.077 63.158 0.00 0.00 0.00 4.55
3731 3976 0.682209 TTCCTACTCCCTCCGTTCCG 60.682 60.000 0.00 0.00 0.00 4.30
3732 3977 1.112950 CTTCCTACTCCCTCCGTTCC 58.887 60.000 0.00 0.00 0.00 3.62
3733 3978 1.849977 ACTTCCTACTCCCTCCGTTC 58.150 55.000 0.00 0.00 0.00 3.95
3734 3979 3.463048 TTACTTCCTACTCCCTCCGTT 57.537 47.619 0.00 0.00 0.00 4.44
3735 3980 3.684408 ATTACTTCCTACTCCCTCCGT 57.316 47.619 0.00 0.00 0.00 4.69
3736 3981 6.374894 CAGTATATTACTTCCTACTCCCTCCG 59.625 46.154 0.00 0.00 36.76 4.63
3737 3982 7.240167 ACAGTATATTACTTCCTACTCCCTCC 58.760 42.308 0.00 0.00 36.76 4.30
3738 3983 9.452287 CTACAGTATATTACTTCCTACTCCCTC 57.548 40.741 0.00 0.00 36.76 4.30
3739 3984 9.180282 TCTACAGTATATTACTTCCTACTCCCT 57.820 37.037 0.00 0.00 36.76 4.20
3740 3985 9.978336 ATCTACAGTATATTACTTCCTACTCCC 57.022 37.037 0.00 0.00 36.76 4.30
3747 3992 9.425577 GGCTTTGATCTACAGTATATTACTTCC 57.574 37.037 0.00 0.00 36.76 3.46
3751 3996 9.982651 TGAAGGCTTTGATCTACAGTATATTAC 57.017 33.333 0.00 0.00 0.00 1.89
3753 3998 9.553064 CTTGAAGGCTTTGATCTACAGTATATT 57.447 33.333 0.00 0.00 0.00 1.28
3754 3999 7.659390 GCTTGAAGGCTTTGATCTACAGTATAT 59.341 37.037 0.00 0.00 0.00 0.86
3755 4000 6.986817 GCTTGAAGGCTTTGATCTACAGTATA 59.013 38.462 0.00 0.00 0.00 1.47
3756 4001 5.819901 GCTTGAAGGCTTTGATCTACAGTAT 59.180 40.000 0.00 0.00 0.00 2.12
3757 4002 5.046304 AGCTTGAAGGCTTTGATCTACAGTA 60.046 40.000 0.00 0.00 39.86 2.74
3758 4003 4.006319 GCTTGAAGGCTTTGATCTACAGT 58.994 43.478 0.00 0.00 0.00 3.55
3759 4004 4.260170 AGCTTGAAGGCTTTGATCTACAG 58.740 43.478 0.00 0.00 39.86 2.74
3760 4005 4.292186 AGCTTGAAGGCTTTGATCTACA 57.708 40.909 0.00 0.00 39.86 2.74
3770 4015 0.036858 GGTCGAGAAGCTTGAAGGCT 60.037 55.000 2.10 0.00 45.30 4.58
3771 4016 0.320771 TGGTCGAGAAGCTTGAAGGC 60.321 55.000 2.10 0.00 0.00 4.35
3772 4017 1.001406 ACTGGTCGAGAAGCTTGAAGG 59.999 52.381 2.10 0.00 0.00 3.46
3773 4018 2.447244 ACTGGTCGAGAAGCTTGAAG 57.553 50.000 2.10 0.00 0.00 3.02
3774 4019 2.102420 TGAACTGGTCGAGAAGCTTGAA 59.898 45.455 2.10 0.00 0.00 2.69
3775 4020 1.686587 TGAACTGGTCGAGAAGCTTGA 59.313 47.619 2.10 0.00 0.00 3.02
3776 4021 2.154854 TGAACTGGTCGAGAAGCTTG 57.845 50.000 2.10 0.00 0.00 4.01
3777 4022 2.910688 TTGAACTGGTCGAGAAGCTT 57.089 45.000 0.00 0.00 0.00 3.74
3778 4023 2.910688 TTTGAACTGGTCGAGAAGCT 57.089 45.000 0.00 0.00 0.00 3.74
3779 4024 3.963383 TTTTTGAACTGGTCGAGAAGC 57.037 42.857 0.00 0.00 0.00 3.86
3780 4025 4.222114 GCATTTTTGAACTGGTCGAGAAG 58.778 43.478 0.00 0.00 0.00 2.85
3781 4026 3.004315 GGCATTTTTGAACTGGTCGAGAA 59.996 43.478 0.00 0.00 0.00 2.87
3782 4027 2.552315 GGCATTTTTGAACTGGTCGAGA 59.448 45.455 0.00 0.00 0.00 4.04
3783 4028 2.665519 CGGCATTTTTGAACTGGTCGAG 60.666 50.000 0.00 0.00 0.00 4.04
3784 4029 1.265635 CGGCATTTTTGAACTGGTCGA 59.734 47.619 0.00 0.00 0.00 4.20
3785 4030 1.001815 ACGGCATTTTTGAACTGGTCG 60.002 47.619 0.00 0.00 0.00 4.79
3786 4031 2.223711 ACACGGCATTTTTGAACTGGTC 60.224 45.455 0.00 0.00 0.00 4.02
3787 4032 1.754226 ACACGGCATTTTTGAACTGGT 59.246 42.857 0.00 0.00 0.00 4.00
3788 4033 2.126467 CACACGGCATTTTTGAACTGG 58.874 47.619 0.00 0.00 0.00 4.00
3789 4034 2.535166 CACACACGGCATTTTTGAACTG 59.465 45.455 0.00 0.00 0.00 3.16
3790 4035 2.165437 ACACACACGGCATTTTTGAACT 59.835 40.909 0.00 0.00 0.00 3.01
3791 4036 2.533942 GACACACACGGCATTTTTGAAC 59.466 45.455 0.00 0.00 0.00 3.18
3792 4037 2.480416 GGACACACACGGCATTTTTGAA 60.480 45.455 0.00 0.00 0.00 2.69
3793 4038 1.066303 GGACACACACGGCATTTTTGA 59.934 47.619 0.00 0.00 0.00 2.69
3794 4039 1.066908 AGGACACACACGGCATTTTTG 59.933 47.619 0.00 0.00 0.00 2.44
3795 4040 1.398692 AGGACACACACGGCATTTTT 58.601 45.000 0.00 0.00 0.00 1.94
3796 4041 2.264005 TAGGACACACACGGCATTTT 57.736 45.000 0.00 0.00 0.00 1.82
3797 4042 2.264005 TTAGGACACACACGGCATTT 57.736 45.000 0.00 0.00 0.00 2.32
3798 4043 2.151202 CTTTAGGACACACACGGCATT 58.849 47.619 0.00 0.00 0.00 3.56
3799 4044 1.808411 CTTTAGGACACACACGGCAT 58.192 50.000 0.00 0.00 0.00 4.40
3800 4045 0.882927 GCTTTAGGACACACACGGCA 60.883 55.000 0.00 0.00 0.00 5.69
3801 4046 0.602905 AGCTTTAGGACACACACGGC 60.603 55.000 0.00 0.00 0.00 5.68
3802 4047 2.334838 GTAGCTTTAGGACACACACGG 58.665 52.381 0.00 0.00 0.00 4.94
3803 4048 2.288579 TGGTAGCTTTAGGACACACACG 60.289 50.000 0.00 0.00 0.00 4.49
3804 4049 3.396260 TGGTAGCTTTAGGACACACAC 57.604 47.619 0.00 0.00 0.00 3.82
3805 4050 4.425180 TTTGGTAGCTTTAGGACACACA 57.575 40.909 0.00 0.00 0.00 3.72
3806 4051 4.320275 GCTTTTGGTAGCTTTAGGACACAC 60.320 45.833 0.00 0.00 38.15 3.82
3807 4052 3.818773 GCTTTTGGTAGCTTTAGGACACA 59.181 43.478 0.00 0.00 38.15 3.72
3808 4053 4.421033 GCTTTTGGTAGCTTTAGGACAC 57.579 45.455 0.00 0.00 38.15 3.67
3823 4068 5.693555 GGAAATTCTTGAAGACCAGCTTTTG 59.306 40.000 0.00 0.00 36.83 2.44
3824 4069 5.363580 TGGAAATTCTTGAAGACCAGCTTTT 59.636 36.000 0.00 0.00 36.83 2.27
3825 4070 4.895297 TGGAAATTCTTGAAGACCAGCTTT 59.105 37.500 0.00 0.00 36.83 3.51
3826 4071 4.473444 TGGAAATTCTTGAAGACCAGCTT 58.527 39.130 0.00 0.00 40.25 3.74
3827 4072 4.104383 TGGAAATTCTTGAAGACCAGCT 57.896 40.909 0.00 0.00 0.00 4.24
3828 4073 5.397142 AATGGAAATTCTTGAAGACCAGC 57.603 39.130 8.06 0.00 0.00 4.85
3829 4074 8.059798 ACATAATGGAAATTCTTGAAGACCAG 57.940 34.615 8.06 0.00 0.00 4.00
3830 4075 8.306038 CAACATAATGGAAATTCTTGAAGACCA 58.694 33.333 4.94 4.94 0.00 4.02
3831 4076 7.276438 GCAACATAATGGAAATTCTTGAAGACC 59.724 37.037 0.00 0.00 0.00 3.85
3832 4077 7.814107 TGCAACATAATGGAAATTCTTGAAGAC 59.186 33.333 0.00 0.00 0.00 3.01
3833 4078 7.894708 TGCAACATAATGGAAATTCTTGAAGA 58.105 30.769 0.00 0.00 0.00 2.87
3834 4079 8.030692 TCTGCAACATAATGGAAATTCTTGAAG 58.969 33.333 0.00 0.00 0.00 3.02
3835 4080 7.894708 TCTGCAACATAATGGAAATTCTTGAA 58.105 30.769 0.00 0.00 0.00 2.69
3836 4081 7.465353 TCTGCAACATAATGGAAATTCTTGA 57.535 32.000 0.00 0.00 0.00 3.02
3837 4082 8.537049 TTTCTGCAACATAATGGAAATTCTTG 57.463 30.769 0.00 0.00 0.00 3.02
3838 4083 9.729281 ATTTTCTGCAACATAATGGAAATTCTT 57.271 25.926 0.00 0.00 0.00 2.52
3839 4084 9.729281 AATTTTCTGCAACATAATGGAAATTCT 57.271 25.926 0.00 0.00 0.00 2.40
3849 4094 8.973378 CCGTTTTCTTAATTTTCTGCAACATAA 58.027 29.630 0.00 0.00 0.00 1.90
3850 4095 8.138712 ACCGTTTTCTTAATTTTCTGCAACATA 58.861 29.630 0.00 0.00 0.00 2.29
3851 4096 6.983890 ACCGTTTTCTTAATTTTCTGCAACAT 59.016 30.769 0.00 0.00 0.00 2.71
3852 4097 6.334202 ACCGTTTTCTTAATTTTCTGCAACA 58.666 32.000 0.00 0.00 0.00 3.33
3853 4098 6.822073 ACCGTTTTCTTAATTTTCTGCAAC 57.178 33.333 0.00 0.00 0.00 4.17
3854 4099 8.928270 TTAACCGTTTTCTTAATTTTCTGCAA 57.072 26.923 0.00 0.00 0.00 4.08
3855 4100 9.535878 AATTAACCGTTTTCTTAATTTTCTGCA 57.464 25.926 0.00 0.00 31.39 4.41
3866 4111 9.857957 TTTGTTCAGTTAATTAACCGTTTTCTT 57.142 25.926 21.92 1.26 36.88 2.52
3867 4112 9.857957 TTTTGTTCAGTTAATTAACCGTTTTCT 57.142 25.926 21.92 1.94 36.88 2.52
3891 4136 3.007635 GCTAGTCCGGTGTGCTATTTTT 58.992 45.455 0.00 0.00 0.00 1.94
3892 4137 2.027561 TGCTAGTCCGGTGTGCTATTTT 60.028 45.455 0.00 0.00 0.00 1.82
3893 4138 1.553248 TGCTAGTCCGGTGTGCTATTT 59.447 47.619 0.00 0.00 0.00 1.40
3894 4139 1.191535 TGCTAGTCCGGTGTGCTATT 58.808 50.000 0.00 0.00 0.00 1.73
3895 4140 1.069204 CATGCTAGTCCGGTGTGCTAT 59.931 52.381 0.00 0.00 0.00 2.97
3896 4141 0.459899 CATGCTAGTCCGGTGTGCTA 59.540 55.000 0.00 0.00 0.00 3.49
3897 4142 1.219124 CATGCTAGTCCGGTGTGCT 59.781 57.895 0.00 0.00 0.00 4.40
3898 4143 1.079127 ACATGCTAGTCCGGTGTGC 60.079 57.895 0.00 2.82 0.00 4.57
3899 4144 0.037326 ACACATGCTAGTCCGGTGTG 60.037 55.000 15.34 15.34 44.19 3.82
3900 4145 0.685097 AACACATGCTAGTCCGGTGT 59.315 50.000 0.00 0.00 43.93 4.16
3901 4146 1.066858 AGAACACATGCTAGTCCGGTG 60.067 52.381 0.00 0.00 35.66 4.94
3902 4147 1.267121 AGAACACATGCTAGTCCGGT 58.733 50.000 0.00 0.00 0.00 5.28
3903 4148 3.735237 ATAGAACACATGCTAGTCCGG 57.265 47.619 0.00 0.00 0.00 5.14
3904 4149 4.022762 AGCTATAGAACACATGCTAGTCCG 60.023 45.833 3.21 0.00 0.00 4.79
3905 4150 5.461032 AGCTATAGAACACATGCTAGTCC 57.539 43.478 3.21 0.00 0.00 3.85
3906 4151 6.640499 CAGAAGCTATAGAACACATGCTAGTC 59.360 42.308 3.21 0.00 0.00 2.59
3907 4152 6.511416 CAGAAGCTATAGAACACATGCTAGT 58.489 40.000 3.21 0.00 0.00 2.57
3908 4153 5.404968 GCAGAAGCTATAGAACACATGCTAG 59.595 44.000 3.21 0.00 37.91 3.42
3909 4154 5.163416 TGCAGAAGCTATAGAACACATGCTA 60.163 40.000 3.21 0.00 42.74 3.49
3910 4155 4.125703 GCAGAAGCTATAGAACACATGCT 58.874 43.478 3.21 0.00 37.91 3.79
3911 4156 3.873361 TGCAGAAGCTATAGAACACATGC 59.127 43.478 3.21 6.10 42.74 4.06
3912 4157 6.314648 TCTTTGCAGAAGCTATAGAACACATG 59.685 38.462 3.21 0.00 42.74 3.21
3913 4158 6.409704 TCTTTGCAGAAGCTATAGAACACAT 58.590 36.000 3.21 0.00 42.74 3.21
3914 4159 5.793817 TCTTTGCAGAAGCTATAGAACACA 58.206 37.500 3.21 0.00 42.74 3.72
3915 4160 6.727824 TTCTTTGCAGAAGCTATAGAACAC 57.272 37.500 3.21 0.00 42.74 3.32
3916 4161 6.149474 GGTTTCTTTGCAGAAGCTATAGAACA 59.851 38.462 3.21 0.00 40.28 3.18
3917 4162 6.372937 AGGTTTCTTTGCAGAAGCTATAGAAC 59.627 38.462 3.21 0.00 40.28 3.01
3918 4163 6.476378 AGGTTTCTTTGCAGAAGCTATAGAA 58.524 36.000 3.21 0.00 40.28 2.10
3919 4164 6.054860 AGGTTTCTTTGCAGAAGCTATAGA 57.945 37.500 3.21 0.00 40.28 1.98
3920 4165 6.749923 AAGGTTTCTTTGCAGAAGCTATAG 57.250 37.500 0.00 0.00 40.28 1.31
3921 4166 8.630054 TTTAAGGTTTCTTTGCAGAAGCTATA 57.370 30.769 0.00 0.00 40.28 1.31
3922 4167 7.524717 TTTAAGGTTTCTTTGCAGAAGCTAT 57.475 32.000 0.00 0.00 40.28 2.97
3923 4168 6.952773 TTTAAGGTTTCTTTGCAGAAGCTA 57.047 33.333 0.00 0.00 40.28 3.32
3924 4169 5.852282 TTTAAGGTTTCTTTGCAGAAGCT 57.148 34.783 3.23 2.41 40.28 3.74
3925 4170 8.587952 TTATTTTAAGGTTTCTTTGCAGAAGC 57.412 30.769 4.38 0.07 40.28 3.86
3926 4171 9.196552 CCTTATTTTAAGGTTTCTTTGCAGAAG 57.803 33.333 5.33 0.00 40.28 2.85
3927 4172 7.655732 GCCTTATTTTAAGGTTTCTTTGCAGAA 59.344 33.333 13.40 0.00 39.60 3.02
3928 4173 7.151976 GCCTTATTTTAAGGTTTCTTTGCAGA 58.848 34.615 13.40 0.00 39.60 4.26
3929 4174 6.089417 CGCCTTATTTTAAGGTTTCTTTGCAG 59.911 38.462 13.40 0.00 39.60 4.41
3930 4175 5.923684 CGCCTTATTTTAAGGTTTCTTTGCA 59.076 36.000 13.40 0.00 39.60 4.08
3931 4176 5.163992 GCGCCTTATTTTAAGGTTTCTTTGC 60.164 40.000 13.40 4.95 39.60 3.68
3932 4177 6.156519 AGCGCCTTATTTTAAGGTTTCTTTG 58.843 36.000 2.29 0.07 39.60 2.77
3933 4178 6.340962 AGCGCCTTATTTTAAGGTTTCTTT 57.659 33.333 2.29 0.00 39.60 2.52
3934 4179 5.977489 AGCGCCTTATTTTAAGGTTTCTT 57.023 34.783 2.29 0.00 39.60 2.52
3935 4180 5.105877 GGAAGCGCCTTATTTTAAGGTTTCT 60.106 40.000 2.29 6.70 39.60 2.52
3936 4181 5.100259 GGAAGCGCCTTATTTTAAGGTTTC 58.900 41.667 2.29 13.29 39.60 2.78
3937 4182 4.081862 GGGAAGCGCCTTATTTTAAGGTTT 60.082 41.667 2.29 7.16 39.60 3.27
3938 4183 3.446161 GGGAAGCGCCTTATTTTAAGGTT 59.554 43.478 2.29 2.29 39.60 3.50
3939 4184 3.021695 GGGAAGCGCCTTATTTTAAGGT 58.978 45.455 2.29 0.00 39.60 3.50
3940 4185 3.020984 TGGGAAGCGCCTTATTTTAAGG 58.979 45.455 2.29 8.64 40.39 2.69
3941 4186 4.918810 ATGGGAAGCGCCTTATTTTAAG 57.081 40.909 2.29 0.00 36.66 1.85
3942 4187 4.707448 TGAATGGGAAGCGCCTTATTTTAA 59.293 37.500 2.29 0.00 36.66 1.52
3943 4188 4.097286 GTGAATGGGAAGCGCCTTATTTTA 59.903 41.667 2.29 0.00 36.66 1.52
3944 4189 3.096092 TGAATGGGAAGCGCCTTATTTT 58.904 40.909 2.29 0.00 36.66 1.82
3945 4190 2.427095 GTGAATGGGAAGCGCCTTATTT 59.573 45.455 2.29 0.00 36.66 1.40
3946 4191 2.024414 GTGAATGGGAAGCGCCTTATT 58.976 47.619 2.29 0.00 36.66 1.40
3947 4192 1.064758 TGTGAATGGGAAGCGCCTTAT 60.065 47.619 2.29 0.00 36.66 1.73
3948 4193 0.326595 TGTGAATGGGAAGCGCCTTA 59.673 50.000 2.29 0.00 36.66 2.69
3949 4194 0.323725 ATGTGAATGGGAAGCGCCTT 60.324 50.000 2.29 0.00 36.66 4.35
3950 4195 0.323725 AATGTGAATGGGAAGCGCCT 60.324 50.000 2.29 0.00 36.66 5.52
3951 4196 0.532115 AAATGTGAATGGGAAGCGCC 59.468 50.000 2.29 0.00 0.00 6.53
3952 4197 3.179048 GTTAAATGTGAATGGGAAGCGC 58.821 45.455 0.00 0.00 0.00 5.92
3953 4198 4.433186 TGTTAAATGTGAATGGGAAGCG 57.567 40.909 0.00 0.00 0.00 4.68
3954 4199 4.929211 GGTTGTTAAATGTGAATGGGAAGC 59.071 41.667 0.00 0.00 0.00 3.86
3955 4200 6.095432 TGGTTGTTAAATGTGAATGGGAAG 57.905 37.500 0.00 0.00 0.00 3.46
3956 4201 6.678568 ATGGTTGTTAAATGTGAATGGGAA 57.321 33.333 0.00 0.00 0.00 3.97
3957 4202 6.721668 TGTATGGTTGTTAAATGTGAATGGGA 59.278 34.615 0.00 0.00 0.00 4.37
3958 4203 6.929625 TGTATGGTTGTTAAATGTGAATGGG 58.070 36.000 0.00 0.00 0.00 4.00
3959 4204 8.303156 TCTTGTATGGTTGTTAAATGTGAATGG 58.697 33.333 0.00 0.00 0.00 3.16
3960 4205 9.689976 TTCTTGTATGGTTGTTAAATGTGAATG 57.310 29.630 0.00 0.00 0.00 2.67
3961 4206 9.912634 CTTCTTGTATGGTTGTTAAATGTGAAT 57.087 29.630 0.00 0.00 0.00 2.57
3962 4207 9.126151 TCTTCTTGTATGGTTGTTAAATGTGAA 57.874 29.630 0.00 0.00 0.00 3.18
3963 4208 8.684386 TCTTCTTGTATGGTTGTTAAATGTGA 57.316 30.769 0.00 0.00 0.00 3.58
3964 4209 9.912634 ATTCTTCTTGTATGGTTGTTAAATGTG 57.087 29.630 0.00 0.00 0.00 3.21
3970 4215 9.513906 TGATCAATTCTTCTTGTATGGTTGTTA 57.486 29.630 0.00 0.00 0.00 2.41
3971 4216 8.408043 TGATCAATTCTTCTTGTATGGTTGTT 57.592 30.769 0.00 0.00 0.00 2.83
3972 4217 8.299570 GTTGATCAATTCTTCTTGTATGGTTGT 58.700 33.333 12.12 0.00 0.00 3.32
3973 4218 7.482743 CGTTGATCAATTCTTCTTGTATGGTTG 59.517 37.037 12.12 0.00 0.00 3.77
3974 4219 7.390440 TCGTTGATCAATTCTTCTTGTATGGTT 59.610 33.333 12.12 0.00 0.00 3.67
3975 4220 6.878923 TCGTTGATCAATTCTTCTTGTATGGT 59.121 34.615 12.12 0.00 0.00 3.55
3976 4221 7.307493 TCGTTGATCAATTCTTCTTGTATGG 57.693 36.000 12.12 0.00 0.00 2.74
3977 4222 9.270576 CTTTCGTTGATCAATTCTTCTTGTATG 57.729 33.333 12.12 0.00 0.00 2.39
3978 4223 7.965107 GCTTTCGTTGATCAATTCTTCTTGTAT 59.035 33.333 12.12 0.00 0.00 2.29
3979 4224 7.041440 TGCTTTCGTTGATCAATTCTTCTTGTA 60.041 33.333 12.12 0.00 0.00 2.41
3980 4225 6.145535 GCTTTCGTTGATCAATTCTTCTTGT 58.854 36.000 12.12 0.00 0.00 3.16
3981 4226 6.087291 GTGCTTTCGTTGATCAATTCTTCTTG 59.913 38.462 12.12 0.00 0.00 3.02
3982 4227 6.145535 GTGCTTTCGTTGATCAATTCTTCTT 58.854 36.000 12.12 0.00 0.00 2.52
3983 4228 5.239306 TGTGCTTTCGTTGATCAATTCTTCT 59.761 36.000 12.12 0.00 0.00 2.85
3984 4229 5.451908 TGTGCTTTCGTTGATCAATTCTTC 58.548 37.500 12.12 0.00 0.00 2.87
3985 4230 5.437289 TGTGCTTTCGTTGATCAATTCTT 57.563 34.783 12.12 0.00 0.00 2.52
3986 4231 5.215160 GTTGTGCTTTCGTTGATCAATTCT 58.785 37.500 12.12 0.00 0.00 2.40
3987 4232 4.087085 CGTTGTGCTTTCGTTGATCAATTC 59.913 41.667 12.12 0.00 0.00 2.17
3988 4233 3.974401 CGTTGTGCTTTCGTTGATCAATT 59.026 39.130 12.12 0.00 0.00 2.32
3989 4234 3.003275 ACGTTGTGCTTTCGTTGATCAAT 59.997 39.130 12.12 0.00 34.07 2.57
3990 4235 2.353269 ACGTTGTGCTTTCGTTGATCAA 59.647 40.909 3.38 3.38 34.07 2.57
3991 4236 1.937223 ACGTTGTGCTTTCGTTGATCA 59.063 42.857 0.00 0.00 34.07 2.92
3992 4237 2.033236 TCACGTTGTGCTTTCGTTGATC 60.033 45.455 0.00 0.00 35.62 2.92
3993 4238 1.937223 TCACGTTGTGCTTTCGTTGAT 59.063 42.857 0.00 0.00 35.62 2.57
3994 4239 1.326245 CTCACGTTGTGCTTTCGTTGA 59.674 47.619 0.00 0.00 35.62 3.18
3995 4240 1.730176 CTCACGTTGTGCTTTCGTTG 58.270 50.000 0.00 0.00 35.62 4.10
3996 4241 0.027586 GCTCACGTTGTGCTTTCGTT 59.972 50.000 0.00 0.00 34.37 3.85
3997 4242 1.641677 GCTCACGTTGTGCTTTCGT 59.358 52.632 0.00 0.00 34.37 3.85
3998 4243 1.437089 CGCTCACGTTGTGCTTTCG 60.437 57.895 0.00 0.00 34.97 3.46
3999 4244 1.082756 CCGCTCACGTTGTGCTTTC 60.083 57.895 0.00 0.00 34.97 2.62
4000 4245 2.542907 CCCGCTCACGTTGTGCTTT 61.543 57.895 0.00 0.00 34.97 3.51
4001 4246 2.972505 CCCGCTCACGTTGTGCTT 60.973 61.111 0.00 0.00 34.97 3.91
4002 4247 4.235762 ACCCGCTCACGTTGTGCT 62.236 61.111 0.00 0.00 34.97 4.40
4003 4248 4.012895 CACCCGCTCACGTTGTGC 62.013 66.667 0.00 0.00 34.68 4.57
4004 4249 1.831389 CTTCACCCGCTCACGTTGTG 61.831 60.000 0.00 0.00 39.89 3.33
4005 4250 1.594293 CTTCACCCGCTCACGTTGT 60.594 57.895 0.00 0.00 37.70 3.32
4006 4251 2.317609 CCTTCACCCGCTCACGTTG 61.318 63.158 0.00 0.00 37.70 4.10
4007 4252 2.030562 CCTTCACCCGCTCACGTT 59.969 61.111 0.00 0.00 37.70 3.99
4008 4253 2.035237 TTTCCTTCACCCGCTCACGT 62.035 55.000 0.00 0.00 37.70 4.49
4009 4254 0.673644 ATTTCCTTCACCCGCTCACG 60.674 55.000 0.00 0.00 39.67 4.35
4010 4255 0.804989 CATTTCCTTCACCCGCTCAC 59.195 55.000 0.00 0.00 0.00 3.51
4011 4256 0.690192 TCATTTCCTTCACCCGCTCA 59.310 50.000 0.00 0.00 0.00 4.26
4012 4257 1.066143 TCTCATTTCCTTCACCCGCTC 60.066 52.381 0.00 0.00 0.00 5.03
4013 4258 0.984230 TCTCATTTCCTTCACCCGCT 59.016 50.000 0.00 0.00 0.00 5.52
4014 4259 1.821216 TTCTCATTTCCTTCACCCGC 58.179 50.000 0.00 0.00 0.00 6.13
4015 4260 3.146066 TGTTTCTCATTTCCTTCACCCG 58.854 45.455 0.00 0.00 0.00 5.28
4016 4261 4.340950 TGTTGTTTCTCATTTCCTTCACCC 59.659 41.667 0.00 0.00 0.00 4.61
4017 4262 5.514274 TGTTGTTTCTCATTTCCTTCACC 57.486 39.130 0.00 0.00 0.00 4.02
4018 4263 6.811170 TGTTTGTTGTTTCTCATTTCCTTCAC 59.189 34.615 0.00 0.00 0.00 3.18
4019 4264 6.929625 TGTTTGTTGTTTCTCATTTCCTTCA 58.070 32.000 0.00 0.00 0.00 3.02
4020 4265 7.257722 TCTGTTTGTTGTTTCTCATTTCCTTC 58.742 34.615 0.00 0.00 0.00 3.46
4021 4266 7.169158 TCTGTTTGTTGTTTCTCATTTCCTT 57.831 32.000 0.00 0.00 0.00 3.36
4022 4267 6.773976 TCTGTTTGTTGTTTCTCATTTCCT 57.226 33.333 0.00 0.00 0.00 3.36
4023 4268 7.826260 TTTCTGTTTGTTGTTTCTCATTTCC 57.174 32.000 0.00 0.00 0.00 3.13
4024 4269 9.086336 TCATTTCTGTTTGTTGTTTCTCATTTC 57.914 29.630 0.00 0.00 0.00 2.17
4025 4270 8.872845 GTCATTTCTGTTTGTTGTTTCTCATTT 58.127 29.630 0.00 0.00 0.00 2.32
4026 4271 8.034215 TGTCATTTCTGTTTGTTGTTTCTCATT 58.966 29.630 0.00 0.00 0.00 2.57
4027 4272 7.546358 TGTCATTTCTGTTTGTTGTTTCTCAT 58.454 30.769 0.00 0.00 0.00 2.90
4028 4273 6.918626 TGTCATTTCTGTTTGTTGTTTCTCA 58.081 32.000 0.00 0.00 0.00 3.27
4029 4274 7.810766 TTGTCATTTCTGTTTGTTGTTTCTC 57.189 32.000 0.00 0.00 0.00 2.87
4030 4275 8.776376 AATTGTCATTTCTGTTTGTTGTTTCT 57.224 26.923 0.00 0.00 0.00 2.52
4032 4277 9.868277 TCTAATTGTCATTTCTGTTTGTTGTTT 57.132 25.926 0.00 0.00 0.00 2.83
4034 4279 9.467258 CATCTAATTGTCATTTCTGTTTGTTGT 57.533 29.630 0.00 0.00 0.00 3.32
4035 4280 9.467258 ACATCTAATTGTCATTTCTGTTTGTTG 57.533 29.630 0.00 0.00 0.00 3.33
4041 4286 9.466497 ACCATAACATCTAATTGTCATTTCTGT 57.534 29.630 0.00 0.00 0.00 3.41
4044 4289 9.438291 CGAACCATAACATCTAATTGTCATTTC 57.562 33.333 0.00 0.00 0.00 2.17
4045 4290 8.956426 ACGAACCATAACATCTAATTGTCATTT 58.044 29.630 0.00 0.00 0.00 2.32
4046 4291 8.397906 CACGAACCATAACATCTAATTGTCATT 58.602 33.333 0.00 0.00 0.00 2.57
4047 4292 7.012327 CCACGAACCATAACATCTAATTGTCAT 59.988 37.037 0.00 0.00 0.00 3.06
4048 4293 6.315144 CCACGAACCATAACATCTAATTGTCA 59.685 38.462 0.00 0.00 0.00 3.58
4049 4294 6.315393 ACCACGAACCATAACATCTAATTGTC 59.685 38.462 0.00 0.00 0.00 3.18
4050 4295 6.093495 CACCACGAACCATAACATCTAATTGT 59.907 38.462 0.00 0.00 0.00 2.71
4051 4296 6.458206 CCACCACGAACCATAACATCTAATTG 60.458 42.308 0.00 0.00 0.00 2.32
4052 4297 5.588648 CCACCACGAACCATAACATCTAATT 59.411 40.000 0.00 0.00 0.00 1.40
4053 4298 5.123227 CCACCACGAACCATAACATCTAAT 58.877 41.667 0.00 0.00 0.00 1.73
4054 4299 4.020039 ACCACCACGAACCATAACATCTAA 60.020 41.667 0.00 0.00 0.00 2.10
4055 4300 3.516300 ACCACCACGAACCATAACATCTA 59.484 43.478 0.00 0.00 0.00 1.98
4056 4301 2.304761 ACCACCACGAACCATAACATCT 59.695 45.455 0.00 0.00 0.00 2.90
4057 4302 2.418628 CACCACCACGAACCATAACATC 59.581 50.000 0.00 0.00 0.00 3.06
4058 4303 2.432444 CACCACCACGAACCATAACAT 58.568 47.619 0.00 0.00 0.00 2.71
4059 4304 1.885560 CACCACCACGAACCATAACA 58.114 50.000 0.00 0.00 0.00 2.41
4060 4305 0.519961 GCACCACCACGAACCATAAC 59.480 55.000 0.00 0.00 0.00 1.89
4061 4306 0.606944 GGCACCACCACGAACCATAA 60.607 55.000 0.00 0.00 38.86 1.90
4062 4307 1.003112 GGCACCACCACGAACCATA 60.003 57.895 0.00 0.00 38.86 2.74
4063 4308 2.282180 GGCACCACCACGAACCAT 60.282 61.111 0.00 0.00 38.86 3.55
4064 4309 3.798511 TGGCACCACCACGAACCA 61.799 61.111 0.00 0.00 46.36 3.67
4072 4317 1.406539 CTAGCATCATTTGGCACCACC 59.593 52.381 0.00 0.00 39.84 4.61
4073 4318 1.202336 GCTAGCATCATTTGGCACCAC 60.202 52.381 10.63 0.00 0.00 4.16
4074 4319 1.105457 GCTAGCATCATTTGGCACCA 58.895 50.000 10.63 0.00 0.00 4.17
4075 4320 1.105457 TGCTAGCATCATTTGGCACC 58.895 50.000 14.93 0.00 0.00 5.01
4076 4321 1.473677 TGTGCTAGCATCATTTGGCAC 59.526 47.619 22.51 5.03 46.65 5.01
4077 4322 1.836802 TGTGCTAGCATCATTTGGCA 58.163 45.000 22.51 8.55 0.00 4.92
4078 4323 2.925563 GTTTGTGCTAGCATCATTTGGC 59.074 45.455 22.51 5.68 0.00 4.52
4079 4324 4.177165 TGTTTGTGCTAGCATCATTTGG 57.823 40.909 22.51 0.00 0.00 3.28
4080 4325 4.983538 TGTTGTTTGTGCTAGCATCATTTG 59.016 37.500 22.51 0.00 0.00 2.32
4081 4326 5.199024 TGTTGTTTGTGCTAGCATCATTT 57.801 34.783 22.51 0.00 0.00 2.32
4082 4327 4.852134 TGTTGTTTGTGCTAGCATCATT 57.148 36.364 22.51 0.00 0.00 2.57
4083 4328 4.219070 ACATGTTGTTTGTGCTAGCATCAT 59.781 37.500 22.51 13.10 0.00 2.45
4084 4329 3.569277 ACATGTTGTTTGTGCTAGCATCA 59.431 39.130 22.51 17.26 0.00 3.07
4085 4330 4.164822 ACATGTTGTTTGTGCTAGCATC 57.835 40.909 22.51 14.82 0.00 3.91
4086 4331 4.589216 AACATGTTGTTTGTGCTAGCAT 57.411 36.364 22.51 0.00 37.26 3.79
4087 4332 4.556501 GCTAACATGTTGTTTGTGCTAGCA 60.557 41.667 21.42 14.93 41.45 3.49
4088 4333 3.914364 GCTAACATGTTGTTTGTGCTAGC 59.086 43.478 21.42 13.99 41.45 3.42
4089 4334 5.107109 TGCTAACATGTTGTTTGTGCTAG 57.893 39.130 21.42 7.99 41.45 3.42
4090 4335 5.703978 ATGCTAACATGTTGTTTGTGCTA 57.296 34.783 21.42 0.00 41.45 3.49
4091 4336 4.589216 ATGCTAACATGTTGTTTGTGCT 57.411 36.364 21.42 0.00 41.45 4.40
4092 4337 5.218885 TGTATGCTAACATGTTGTTTGTGC 58.781 37.500 21.42 14.23 41.45 4.57
4093 4338 6.667370 TCTGTATGCTAACATGTTGTTTGTG 58.333 36.000 21.42 5.47 41.45 3.33
4094 4339 6.486657 ACTCTGTATGCTAACATGTTGTTTGT 59.513 34.615 21.42 6.03 41.45 2.83
4095 4340 6.798476 CACTCTGTATGCTAACATGTTGTTTG 59.202 38.462 21.42 9.38 41.45 2.93
4096 4341 6.486657 ACACTCTGTATGCTAACATGTTGTTT 59.513 34.615 21.42 5.94 41.45 2.83
4097 4342 5.997746 ACACTCTGTATGCTAACATGTTGTT 59.002 36.000 21.42 5.61 43.88 2.83
4098 4343 5.409520 CACACTCTGTATGCTAACATGTTGT 59.590 40.000 21.42 3.25 37.04 3.32
4099 4344 5.409520 ACACACTCTGTATGCTAACATGTTG 59.590 40.000 21.42 11.79 37.04 3.33
4100 4345 5.409520 CACACACTCTGTATGCTAACATGTT 59.590 40.000 16.68 16.68 37.04 2.71
4101 4346 4.931601 CACACACTCTGTATGCTAACATGT 59.068 41.667 0.00 0.00 37.04 3.21
4102 4347 4.330894 CCACACACTCTGTATGCTAACATG 59.669 45.833 0.00 0.00 37.04 3.21
4103 4348 4.507710 CCACACACTCTGTATGCTAACAT 58.492 43.478 0.00 0.00 40.49 2.71
4104 4349 3.306710 CCCACACACTCTGTATGCTAACA 60.307 47.826 0.00 0.00 0.00 2.41
4105 4350 3.262420 CCCACACACTCTGTATGCTAAC 58.738 50.000 0.00 0.00 0.00 2.34
4106 4351 2.354704 GCCCACACACTCTGTATGCTAA 60.355 50.000 0.00 0.00 0.00 3.09
4107 4352 1.207089 GCCCACACACTCTGTATGCTA 59.793 52.381 0.00 0.00 0.00 3.49
4108 4353 0.036010 GCCCACACACTCTGTATGCT 60.036 55.000 0.00 0.00 0.00 3.79
4109 4354 1.361668 CGCCCACACACTCTGTATGC 61.362 60.000 0.00 0.00 0.00 3.14
4110 4355 1.361668 GCGCCCACACACTCTGTATG 61.362 60.000 0.00 0.00 0.00 2.39
4111 4356 1.079127 GCGCCCACACACTCTGTAT 60.079 57.895 0.00 0.00 0.00 2.29
4112 4357 2.342279 GCGCCCACACACTCTGTA 59.658 61.111 0.00 0.00 0.00 2.74
4113 4358 4.969196 CGCGCCCACACACTCTGT 62.969 66.667 0.00 0.00 0.00 3.41
4114 4359 4.969196 ACGCGCCCACACACTCTG 62.969 66.667 5.73 0.00 0.00 3.35
4115 4360 4.969196 CACGCGCCCACACACTCT 62.969 66.667 5.73 0.00 0.00 3.24
4124 4369 4.241999 GATCATGCACACGCGCCC 62.242 66.667 5.73 0.00 42.97 6.13
4125 4370 3.498834 TGATCATGCACACGCGCC 61.499 61.111 5.73 0.00 42.97 6.53
4126 4371 2.276868 GTGATCATGCACACGCGC 60.277 61.111 5.73 0.00 42.97 6.86
4127 4372 2.400798 GGTGATCATGCACACGCG 59.599 61.111 3.53 3.53 42.97 6.01
4128 4373 2.400798 CGGTGATCATGCACACGC 59.599 61.111 0.00 7.67 40.52 5.34
4129 4374 2.400798 GCGGTGATCATGCACACG 59.599 61.111 15.61 10.83 40.52 4.49
4130 4375 2.400798 CGCGGTGATCATGCACAC 59.599 61.111 19.10 11.72 40.52 3.82
4131 4376 3.498834 GCGCGGTGATCATGCACA 61.499 61.111 19.10 0.00 40.52 4.57
4132 4377 4.241999 GGCGCGGTGATCATGCAC 62.242 66.667 19.10 11.56 38.05 4.57
4133 4378 4.471908 AGGCGCGGTGATCATGCA 62.472 61.111 19.10 0.00 0.00 3.96
4134 4379 3.945434 CAGGCGCGGTGATCATGC 61.945 66.667 8.83 11.67 0.00 4.06
4135 4380 1.227234 TACAGGCGCGGTGATCATG 60.227 57.895 14.71 0.16 0.00 3.07
4136 4381 1.227263 GTACAGGCGCGGTGATCAT 60.227 57.895 14.71 0.00 0.00 2.45
4137 4382 2.183300 GTACAGGCGCGGTGATCA 59.817 61.111 14.71 0.00 0.00 2.92
4138 4383 2.954868 CGTACAGGCGCGGTGATC 60.955 66.667 14.71 6.48 0.00 2.92
4139 4384 3.755628 ACGTACAGGCGCGGTGAT 61.756 61.111 14.71 2.81 34.88 3.06
4140 4385 4.710695 CACGTACAGGCGCGGTGA 62.711 66.667 14.71 0.00 34.88 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.