Multiple sequence alignment - TraesCS5A01G030200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G030200 chr5A 100.000 4007 0 0 1 4007 26157861 26153855 0.000000e+00 7400.0
1 TraesCS5A01G030200 chr5A 90.488 1251 93 15 676 1917 545973630 545974863 0.000000e+00 1628.0
2 TraesCS5A01G030200 chr5A 91.076 1087 59 16 1992 3075 545981317 545982368 0.000000e+00 1435.0
3 TraesCS5A01G030200 chr5D 94.135 3137 125 27 850 3956 37194214 37191107 0.000000e+00 4719.0
4 TraesCS5A01G030200 chr5D 90.780 1193 101 6 1886 3075 430442231 430443417 0.000000e+00 1585.0
5 TraesCS5A01G030200 chr5D 88.368 1195 109 18 657 1843 430441056 430442228 0.000000e+00 1410.0
6 TraesCS5A01G030200 chr5D 92.814 167 8 3 616 781 37194395 37194232 5.180000e-59 239.0
7 TraesCS5A01G030200 chr5D 82.787 122 3 7 378 499 37194606 37194503 4.260000e-15 93.5
8 TraesCS5A01G030200 chr7B 90.893 2767 197 32 669 3405 70483636 70480895 0.000000e+00 3663.0
9 TraesCS5A01G030200 chr7B 87.097 248 25 7 4 246 206622480 206622235 1.420000e-69 274.0
10 TraesCS5A01G030200 chr7B 80.349 229 40 4 3177 3405 99799839 99800062 6.890000e-38 169.0
11 TraesCS5A01G030200 chr7A 90.850 2776 192 35 665 3405 116116148 116113400 0.000000e+00 3663.0
12 TraesCS5A01G030200 chr4D 90.923 2699 180 30 727 3405 9318954 9316301 0.000000e+00 3567.0
13 TraesCS5A01G030200 chr4D 81.498 654 78 19 2762 3405 9324477 9325097 7.730000e-137 497.0
14 TraesCS5A01G030200 chr7D 90.737 2699 184 32 727 3405 111049941 111047289 0.000000e+00 3539.0
15 TraesCS5A01G030200 chr5B 89.117 1121 112 7 1958 3075 519642192 519643305 0.000000e+00 1386.0
16 TraesCS5A01G030200 chr5B 87.123 862 84 20 676 1529 519614450 519615292 0.000000e+00 952.0
17 TraesCS5A01G030200 chr3D 86.176 774 94 8 1172 1938 580546711 580547478 0.000000e+00 824.0
18 TraesCS5A01G030200 chr3D 82.781 151 17 7 415 557 438621092 438621241 4.200000e-25 126.0
19 TraesCS5A01G030200 chr3D 87.805 82 9 1 459 539 226616826 226616907 1.190000e-15 95.3
20 TraesCS5A01G030200 chr3D 80.000 110 14 5 3505 3607 500223861 500223753 1.540000e-09 75.0
21 TraesCS5A01G030200 chr3D 79.091 110 14 6 3505 3607 568490959 568490852 2.580000e-07 67.6
22 TraesCS5A01G030200 chr3A 85.640 773 97 5 1172 1941 716090829 716091590 0.000000e+00 800.0
23 TraesCS5A01G030200 chr3A 86.420 81 10 1 460 539 299564160 299564240 1.980000e-13 87.9
24 TraesCS5A01G030200 chr1D 86.640 247 29 4 3 247 482281158 482281402 1.840000e-68 270.0
25 TraesCS5A01G030200 chr2B 85.944 249 27 8 4 247 654508391 654508636 3.970000e-65 259.0
26 TraesCS5A01G030200 chr2B 84.836 244 27 9 9 248 476569639 476569402 1.860000e-58 237.0
27 TraesCS5A01G030200 chr2B 85.128 195 22 7 4 193 654479106 654479298 4.090000e-45 193.0
28 TraesCS5A01G030200 chr2B 77.922 231 42 4 3177 3405 232282649 232282426 6.990000e-28 135.0
29 TraesCS5A01G030200 chr3B 85.200 250 29 6 3 247 77166547 77166793 2.390000e-62 250.0
30 TraesCS5A01G030200 chr3B 84.519 239 23 11 10 243 154769363 154769592 1.450000e-54 224.0
31 TraesCS5A01G030200 chr3B 88.889 72 7 1 469 539 325796348 325796277 1.980000e-13 87.9
32 TraesCS5A01G030200 chr3B 100.000 29 0 0 248 276 375752773 375752745 2.000000e-03 54.7
33 TraesCS5A01G030200 chr1B 85.306 245 29 7 4 243 87976987 87977229 3.090000e-61 246.0
34 TraesCS5A01G030200 chrUn 85.128 195 22 7 4 193 235932510 235932702 4.090000e-45 193.0
35 TraesCS5A01G030200 chr2A 77.922 231 42 4 3177 3405 187314482 187314705 6.990000e-28 135.0
36 TraesCS5A01G030200 chr6D 86.486 74 3 4 469 535 22969826 22969753 1.540000e-09 75.0
37 TraesCS5A01G030200 chr2D 79.091 110 14 6 3505 3607 598267167 598267060 2.580000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G030200 chr5A 26153855 26157861 4006 True 7400.000000 7400 100.000 1 4007 1 chr5A.!!$R1 4006
1 TraesCS5A01G030200 chr5A 545973630 545974863 1233 False 1628.000000 1628 90.488 676 1917 1 chr5A.!!$F1 1241
2 TraesCS5A01G030200 chr5A 545981317 545982368 1051 False 1435.000000 1435 91.076 1992 3075 1 chr5A.!!$F2 1083
3 TraesCS5A01G030200 chr5D 37191107 37194606 3499 True 1683.833333 4719 89.912 378 3956 3 chr5D.!!$R1 3578
4 TraesCS5A01G030200 chr5D 430441056 430443417 2361 False 1497.500000 1585 89.574 657 3075 2 chr5D.!!$F1 2418
5 TraesCS5A01G030200 chr7B 70480895 70483636 2741 True 3663.000000 3663 90.893 669 3405 1 chr7B.!!$R1 2736
6 TraesCS5A01G030200 chr7A 116113400 116116148 2748 True 3663.000000 3663 90.850 665 3405 1 chr7A.!!$R1 2740
7 TraesCS5A01G030200 chr4D 9316301 9318954 2653 True 3567.000000 3567 90.923 727 3405 1 chr4D.!!$R1 2678
8 TraesCS5A01G030200 chr4D 9324477 9325097 620 False 497.000000 497 81.498 2762 3405 1 chr4D.!!$F1 643
9 TraesCS5A01G030200 chr7D 111047289 111049941 2652 True 3539.000000 3539 90.737 727 3405 1 chr7D.!!$R1 2678
10 TraesCS5A01G030200 chr5B 519642192 519643305 1113 False 1386.000000 1386 89.117 1958 3075 1 chr5B.!!$F2 1117
11 TraesCS5A01G030200 chr5B 519614450 519615292 842 False 952.000000 952 87.123 676 1529 1 chr5B.!!$F1 853
12 TraesCS5A01G030200 chr3D 580546711 580547478 767 False 824.000000 824 86.176 1172 1938 1 chr3D.!!$F3 766
13 TraesCS5A01G030200 chr3A 716090829 716091590 761 False 800.000000 800 85.640 1172 1941 1 chr3A.!!$F2 769

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
343 344 0.037605 CTCGGCCCAAAAGTACGTCT 60.038 55.0 0.00 0.0 0.00 4.18 F
344 345 0.037975 TCGGCCCAAAAGTACGTCTC 60.038 55.0 0.00 0.0 0.00 3.36 F
356 357 0.106335 TACGTCTCGGCCCAAAAACA 59.894 50.0 0.00 0.0 0.00 2.83 F
1596 1659 0.177141 TGGACGTACAGCCTTATGCC 59.823 55.0 0.00 0.0 42.71 4.40 F
2271 2336 0.461961 GAGGCGCTGGTGTCTATTCT 59.538 55.0 7.64 0.0 0.00 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2256 2321 0.108186 TGGCAGAATAGACACCAGCG 60.108 55.000 0.00 0.00 0.00 5.18 R
2298 2363 1.918262 TCCTTCCACTCATCATTGGCT 59.082 47.619 0.00 0.00 32.37 4.75 R
2367 2432 4.040952 CACCTTTCCAAGATATCCGGATCT 59.959 45.833 23.08 12.00 37.81 2.75 R
2562 2630 0.178068 GAACAATAGGCCGGCTCTCA 59.822 55.000 28.56 9.42 0.00 3.27 R
3969 4086 0.037605 AAGTAAGAACCAGCGACCCG 60.038 55.000 0.00 0.00 0.00 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
109 110 2.350738 AAAAACCATGCCTGGACCG 58.649 52.632 15.66 0.00 46.37 4.79
110 111 1.184970 AAAAACCATGCCTGGACCGG 61.185 55.000 15.66 0.00 46.37 5.28
111 112 2.366153 AAAACCATGCCTGGACCGGT 62.366 55.000 15.66 6.92 46.37 5.28
112 113 2.366153 AAACCATGCCTGGACCGGTT 62.366 55.000 15.66 2.89 46.37 4.44
113 114 2.751436 CCATGCCTGGACCGGTTG 60.751 66.667 9.42 0.00 46.37 3.77
114 115 2.751436 CATGCCTGGACCGGTTGG 60.751 66.667 9.42 13.22 42.84 3.77
115 116 4.047125 ATGCCTGGACCGGTTGGG 62.047 66.667 9.42 12.77 40.75 4.12
117 118 3.961414 GCCTGGACCGGTTGGGAA 61.961 66.667 20.63 1.46 40.75 3.97
118 119 2.033602 CCTGGACCGGTTGGGAAC 59.966 66.667 9.42 0.00 40.75 3.62
147 148 1.905637 GGTTCCAAAACCGGATCAGT 58.094 50.000 9.46 0.00 45.33 3.41
148 149 1.539827 GGTTCCAAAACCGGATCAGTG 59.460 52.381 9.46 0.00 45.33 3.66
149 150 2.500229 GTTCCAAAACCGGATCAGTGA 58.500 47.619 9.46 0.00 34.19 3.41
150 151 2.882137 GTTCCAAAACCGGATCAGTGAA 59.118 45.455 9.46 0.26 34.19 3.18
151 152 3.433306 TCCAAAACCGGATCAGTGAAT 57.567 42.857 9.46 0.00 0.00 2.57
152 153 3.343617 TCCAAAACCGGATCAGTGAATC 58.656 45.455 9.46 0.00 0.00 2.52
153 154 2.095853 CCAAAACCGGATCAGTGAATCG 59.904 50.000 9.46 4.17 0.00 3.34
154 155 1.369625 AAACCGGATCAGTGAATCGC 58.630 50.000 9.46 0.00 0.00 4.58
155 156 0.806102 AACCGGATCAGTGAATCGCG 60.806 55.000 9.46 0.00 0.00 5.87
156 157 2.589492 CCGGATCAGTGAATCGCGC 61.589 63.158 0.00 0.00 0.00 6.86
157 158 1.878069 CGGATCAGTGAATCGCGCA 60.878 57.895 8.75 0.00 0.00 6.09
158 159 1.420641 CGGATCAGTGAATCGCGCAA 61.421 55.000 8.75 0.00 0.00 4.85
159 160 0.940126 GGATCAGTGAATCGCGCAAT 59.060 50.000 8.75 0.00 0.00 3.56
160 161 1.333524 GGATCAGTGAATCGCGCAATG 60.334 52.381 8.75 3.42 33.05 2.82
161 162 0.659427 ATCAGTGAATCGCGCAATGG 59.341 50.000 8.75 0.00 32.67 3.16
162 163 1.063006 CAGTGAATCGCGCAATGGG 59.937 57.895 8.75 0.00 0.00 4.00
163 164 2.278142 GTGAATCGCGCAATGGGC 60.278 61.111 12.54 12.54 38.15 5.36
164 165 3.517140 TGAATCGCGCAATGGGCC 61.517 61.111 16.62 0.00 40.31 5.80
165 166 4.612536 GAATCGCGCAATGGGCCG 62.613 66.667 16.62 11.53 40.31 6.13
178 179 4.120085 GGCCGTCCCATTTAGTCG 57.880 61.111 0.00 0.00 0.00 4.18
179 180 2.178235 GGCCGTCCCATTTAGTCGC 61.178 63.158 0.00 0.00 0.00 5.19
180 181 1.153429 GCCGTCCCATTTAGTCGCT 60.153 57.895 0.00 0.00 0.00 4.93
181 182 1.429148 GCCGTCCCATTTAGTCGCTG 61.429 60.000 0.00 0.00 0.00 5.18
182 183 0.810031 CCGTCCCATTTAGTCGCTGG 60.810 60.000 0.00 0.00 0.00 4.85
183 184 1.429148 CGTCCCATTTAGTCGCTGGC 61.429 60.000 0.00 0.00 0.00 4.85
184 185 1.153449 TCCCATTTAGTCGCTGGCG 60.153 57.895 8.80 8.80 41.35 5.69
185 186 1.449601 CCCATTTAGTCGCTGGCGT 60.450 57.895 14.55 0.00 40.74 5.68
186 187 1.429148 CCCATTTAGTCGCTGGCGTC 61.429 60.000 14.55 9.34 40.74 5.19
187 188 1.631072 CATTTAGTCGCTGGCGTCG 59.369 57.895 14.55 0.00 40.74 5.12
188 189 2.165301 ATTTAGTCGCTGGCGTCGC 61.165 57.895 9.22 9.22 40.74 5.19
219 220 1.452717 GTTTGCACGACAACTTGACG 58.547 50.000 11.33 11.33 41.00 4.35
220 221 0.247894 TTTGCACGACAACTTGACGC 60.248 50.000 12.58 0.04 38.98 5.19
221 222 1.362406 TTGCACGACAACTTGACGCA 61.362 50.000 12.58 2.43 38.98 5.24
222 223 1.350319 GCACGACAACTTGACGCAA 59.650 52.632 12.58 0.00 38.98 4.85
223 224 0.041312 GCACGACAACTTGACGCAAT 60.041 50.000 12.58 0.00 38.98 3.56
224 225 1.193650 GCACGACAACTTGACGCAATA 59.806 47.619 12.58 0.00 38.98 1.90
225 226 2.349060 GCACGACAACTTGACGCAATAA 60.349 45.455 12.58 0.00 38.98 1.40
226 227 3.469629 CACGACAACTTGACGCAATAAG 58.530 45.455 12.58 0.00 38.98 1.73
227 228 2.096417 ACGACAACTTGACGCAATAAGC 60.096 45.455 12.58 0.00 38.98 3.09
241 242 5.941948 GCAATAAGCGTCATATAGGGTTT 57.058 39.130 0.00 0.00 35.47 3.27
242 243 6.313744 GCAATAAGCGTCATATAGGGTTTT 57.686 37.500 0.00 0.00 35.47 2.43
243 244 6.142817 GCAATAAGCGTCATATAGGGTTTTG 58.857 40.000 0.00 0.00 35.47 2.44
244 245 5.941948 ATAAGCGTCATATAGGGTTTTGC 57.058 39.130 0.00 0.00 35.47 3.68
245 246 2.572290 AGCGTCATATAGGGTTTTGCC 58.428 47.619 0.00 0.00 0.00 4.52
246 247 1.263217 GCGTCATATAGGGTTTTGCCG 59.737 52.381 0.00 0.00 38.44 5.69
247 248 2.828877 CGTCATATAGGGTTTTGCCGA 58.171 47.619 0.00 0.00 38.44 5.54
248 249 3.399330 CGTCATATAGGGTTTTGCCGAT 58.601 45.455 0.00 0.00 38.44 4.18
249 250 3.813166 CGTCATATAGGGTTTTGCCGATT 59.187 43.478 0.00 0.00 38.44 3.34
250 251 4.992319 CGTCATATAGGGTTTTGCCGATTA 59.008 41.667 0.00 0.00 38.44 1.75
251 252 5.120208 CGTCATATAGGGTTTTGCCGATTAG 59.880 44.000 0.00 0.00 38.44 1.73
252 253 5.001232 TCATATAGGGTTTTGCCGATTAGC 58.999 41.667 0.00 0.00 38.44 3.09
253 254 2.047002 TAGGGTTTTGCCGATTAGCC 57.953 50.000 0.00 0.00 38.44 3.93
254 255 0.331616 AGGGTTTTGCCGATTAGCCT 59.668 50.000 0.00 0.00 38.44 4.58
255 256 1.562475 AGGGTTTTGCCGATTAGCCTA 59.438 47.619 0.00 0.00 36.78 3.93
256 257 2.174854 AGGGTTTTGCCGATTAGCCTAT 59.825 45.455 0.00 0.00 36.78 2.57
257 258 2.552743 GGGTTTTGCCGATTAGCCTATC 59.447 50.000 0.00 0.00 38.44 2.08
258 259 3.211045 GGTTTTGCCGATTAGCCTATCA 58.789 45.455 0.00 0.00 0.00 2.15
259 260 3.821033 GGTTTTGCCGATTAGCCTATCAT 59.179 43.478 0.00 0.00 0.00 2.45
260 261 4.278419 GGTTTTGCCGATTAGCCTATCATT 59.722 41.667 0.00 0.00 0.00 2.57
261 262 5.472137 GGTTTTGCCGATTAGCCTATCATTA 59.528 40.000 0.00 0.00 0.00 1.90
262 263 6.016610 GGTTTTGCCGATTAGCCTATCATTAA 60.017 38.462 0.00 0.00 0.00 1.40
263 264 7.309194 GGTTTTGCCGATTAGCCTATCATTAAT 60.309 37.037 0.00 0.00 0.00 1.40
264 265 6.985188 TTGCCGATTAGCCTATCATTAATC 57.015 37.500 0.00 0.00 32.86 1.75
265 266 6.299805 TGCCGATTAGCCTATCATTAATCT 57.700 37.500 0.00 0.00 33.63 2.40
266 267 6.711277 TGCCGATTAGCCTATCATTAATCTT 58.289 36.000 0.00 0.00 33.63 2.40
267 268 6.595326 TGCCGATTAGCCTATCATTAATCTTG 59.405 38.462 0.00 0.00 33.63 3.02
268 269 6.818644 GCCGATTAGCCTATCATTAATCTTGA 59.181 38.462 0.00 0.00 33.63 3.02
269 270 7.497249 GCCGATTAGCCTATCATTAATCTTGAT 59.503 37.037 0.00 0.00 37.56 2.57
270 271 9.039870 CCGATTAGCCTATCATTAATCTTGATC 57.960 37.037 0.00 0.00 35.50 2.92
271 272 9.814899 CGATTAGCCTATCATTAATCTTGATCT 57.185 33.333 0.00 0.00 35.50 2.75
273 274 9.814899 ATTAGCCTATCATTAATCTTGATCTCG 57.185 33.333 0.00 0.00 35.50 4.04
274 275 6.638610 AGCCTATCATTAATCTTGATCTCGG 58.361 40.000 0.00 0.00 35.50 4.63
275 276 5.293079 GCCTATCATTAATCTTGATCTCGGC 59.707 44.000 0.00 8.46 35.90 5.54
276 277 5.814705 CCTATCATTAATCTTGATCTCGGCC 59.185 44.000 0.00 0.00 35.50 6.13
277 278 4.008074 TCATTAATCTTGATCTCGGCCC 57.992 45.455 0.00 0.00 0.00 5.80
278 279 3.390967 TCATTAATCTTGATCTCGGCCCA 59.609 43.478 0.00 0.00 0.00 5.36
279 280 3.924114 TTAATCTTGATCTCGGCCCAA 57.076 42.857 0.00 0.00 0.00 4.12
280 281 2.806945 AATCTTGATCTCGGCCCAAA 57.193 45.000 0.00 0.00 0.00 3.28
281 282 2.806945 ATCTTGATCTCGGCCCAAAA 57.193 45.000 0.00 0.00 0.00 2.44
282 283 2.577606 TCTTGATCTCGGCCCAAAAA 57.422 45.000 0.00 0.00 0.00 1.94
283 284 2.436417 TCTTGATCTCGGCCCAAAAAG 58.564 47.619 0.00 0.00 0.00 2.27
284 285 2.039746 TCTTGATCTCGGCCCAAAAAGA 59.960 45.455 0.00 0.00 0.00 2.52
285 286 2.806945 TGATCTCGGCCCAAAAAGAT 57.193 45.000 0.00 0.00 0.00 2.40
286 287 2.643551 TGATCTCGGCCCAAAAAGATC 58.356 47.619 14.92 14.92 42.83 2.75
287 288 1.950216 GATCTCGGCCCAAAAAGATCC 59.050 52.381 0.00 0.00 38.68 3.36
288 289 0.991920 TCTCGGCCCAAAAAGATCCT 59.008 50.000 0.00 0.00 0.00 3.24
289 290 1.098050 CTCGGCCCAAAAAGATCCTG 58.902 55.000 0.00 0.00 0.00 3.86
290 291 0.695924 TCGGCCCAAAAAGATCCTGA 59.304 50.000 0.00 0.00 0.00 3.86
291 292 1.098050 CGGCCCAAAAAGATCCTGAG 58.902 55.000 0.00 0.00 0.00 3.35
292 293 1.478631 GGCCCAAAAAGATCCTGAGG 58.521 55.000 0.00 0.00 0.00 3.86
293 294 0.820226 GCCCAAAAAGATCCTGAGGC 59.180 55.000 0.00 0.00 0.00 4.70
294 295 1.618074 GCCCAAAAAGATCCTGAGGCT 60.618 52.381 0.00 0.00 36.22 4.58
295 296 2.357154 GCCCAAAAAGATCCTGAGGCTA 60.357 50.000 0.00 0.00 36.22 3.93
296 297 3.549794 CCCAAAAAGATCCTGAGGCTAG 58.450 50.000 0.00 0.00 0.00 3.42
297 298 3.549794 CCAAAAAGATCCTGAGGCTAGG 58.450 50.000 0.00 0.00 39.29 3.02
298 299 2.948315 CAAAAAGATCCTGAGGCTAGGC 59.052 50.000 8.55 8.55 37.76 3.93
310 311 0.885196 GGCTAGGCCTCTATGTCTCG 59.115 60.000 9.68 0.00 46.69 4.04
311 312 0.885196 GCTAGGCCTCTATGTCTCGG 59.115 60.000 9.68 0.00 0.00 4.63
312 313 0.885196 CTAGGCCTCTATGTCTCGGC 59.115 60.000 9.68 0.00 41.75 5.54
314 315 2.336809 GCCTCTATGTCTCGGCCG 59.663 66.667 22.12 22.12 36.56 6.13
315 316 2.194212 GCCTCTATGTCTCGGCCGA 61.194 63.158 29.03 29.03 36.56 5.54
316 317 1.735376 GCCTCTATGTCTCGGCCGAA 61.735 60.000 30.53 15.73 36.56 4.30
317 318 0.744874 CCTCTATGTCTCGGCCGAAA 59.255 55.000 30.53 14.97 0.00 3.46
318 319 1.136305 CCTCTATGTCTCGGCCGAAAA 59.864 52.381 30.53 17.70 0.00 2.29
319 320 2.418197 CCTCTATGTCTCGGCCGAAAAA 60.418 50.000 30.53 12.79 0.00 1.94
320 321 2.603560 CTCTATGTCTCGGCCGAAAAAC 59.396 50.000 30.53 25.29 0.00 2.43
321 322 2.028839 TCTATGTCTCGGCCGAAAAACA 60.029 45.455 30.53 29.56 0.00 2.83
322 323 1.156736 ATGTCTCGGCCGAAAAACAG 58.843 50.000 30.53 16.53 0.00 3.16
323 324 0.882927 TGTCTCGGCCGAAAAACAGG 60.883 55.000 30.53 15.74 0.00 4.00
329 330 2.561373 CCGAAAAACAGGCTCGGC 59.439 61.111 0.00 0.00 44.99 5.54
339 340 3.587095 GGCTCGGCCCAAAAGTAC 58.413 61.111 0.00 0.00 44.06 2.73
340 341 2.396157 GGCTCGGCCCAAAAGTACG 61.396 63.158 0.00 0.00 44.06 3.67
341 342 1.670083 GCTCGGCCCAAAAGTACGT 60.670 57.895 0.00 0.00 0.00 3.57
342 343 1.632948 GCTCGGCCCAAAAGTACGTC 61.633 60.000 0.00 0.00 0.00 4.34
343 344 0.037605 CTCGGCCCAAAAGTACGTCT 60.038 55.000 0.00 0.00 0.00 4.18
344 345 0.037975 TCGGCCCAAAAGTACGTCTC 60.038 55.000 0.00 0.00 0.00 3.36
345 346 1.349259 CGGCCCAAAAGTACGTCTCG 61.349 60.000 0.00 0.00 0.00 4.04
346 347 1.017701 GGCCCAAAAGTACGTCTCGG 61.018 60.000 0.00 0.00 0.00 4.63
347 348 1.632948 GCCCAAAAGTACGTCTCGGC 61.633 60.000 0.00 1.43 0.00 5.54
348 349 1.017701 CCCAAAAGTACGTCTCGGCC 61.018 60.000 0.00 0.00 0.00 6.13
349 350 1.017701 CCAAAAGTACGTCTCGGCCC 61.018 60.000 0.00 0.00 0.00 5.80
350 351 0.320073 CAAAAGTACGTCTCGGCCCA 60.320 55.000 0.00 0.00 0.00 5.36
351 352 0.393820 AAAAGTACGTCTCGGCCCAA 59.606 50.000 0.00 0.00 0.00 4.12
352 353 0.393820 AAAGTACGTCTCGGCCCAAA 59.606 50.000 0.00 0.00 0.00 3.28
353 354 0.393820 AAGTACGTCTCGGCCCAAAA 59.606 50.000 0.00 0.00 0.00 2.44
354 355 0.393820 AGTACGTCTCGGCCCAAAAA 59.606 50.000 0.00 0.00 0.00 1.94
355 356 0.514255 GTACGTCTCGGCCCAAAAAC 59.486 55.000 0.00 0.00 0.00 2.43
356 357 0.106335 TACGTCTCGGCCCAAAAACA 59.894 50.000 0.00 0.00 0.00 2.83
357 358 1.164041 ACGTCTCGGCCCAAAAACAG 61.164 55.000 0.00 0.00 0.00 3.16
358 359 1.285950 GTCTCGGCCCAAAAACAGC 59.714 57.895 0.00 0.00 0.00 4.40
359 360 1.901464 TCTCGGCCCAAAAACAGCC 60.901 57.895 0.00 0.00 43.53 4.85
360 361 1.903404 CTCGGCCCAAAAACAGCCT 60.903 57.895 0.00 0.00 44.84 4.58
361 362 1.866853 CTCGGCCCAAAAACAGCCTC 61.867 60.000 0.00 0.00 44.84 4.70
362 363 2.650778 GGCCCAAAAACAGCCTCG 59.349 61.111 0.00 0.00 43.62 4.63
363 364 1.901464 GGCCCAAAAACAGCCTCGA 60.901 57.895 0.00 0.00 43.62 4.04
364 365 1.285950 GCCCAAAAACAGCCTCGAC 59.714 57.895 0.00 0.00 0.00 4.20
365 366 1.956802 CCCAAAAACAGCCTCGACC 59.043 57.895 0.00 0.00 0.00 4.79
366 367 1.524008 CCCAAAAACAGCCTCGACCC 61.524 60.000 0.00 0.00 0.00 4.46
367 368 0.821711 CCAAAAACAGCCTCGACCCA 60.822 55.000 0.00 0.00 0.00 4.51
368 369 1.028905 CAAAAACAGCCTCGACCCAA 58.971 50.000 0.00 0.00 0.00 4.12
369 370 1.407258 CAAAAACAGCCTCGACCCAAA 59.593 47.619 0.00 0.00 0.00 3.28
370 371 1.770294 AAAACAGCCTCGACCCAAAA 58.230 45.000 0.00 0.00 0.00 2.44
371 372 1.770294 AAACAGCCTCGACCCAAAAA 58.230 45.000 0.00 0.00 0.00 1.94
372 373 1.995376 AACAGCCTCGACCCAAAAAT 58.005 45.000 0.00 0.00 0.00 1.82
373 374 2.871096 ACAGCCTCGACCCAAAAATA 57.129 45.000 0.00 0.00 0.00 1.40
374 375 2.711542 ACAGCCTCGACCCAAAAATAG 58.288 47.619 0.00 0.00 0.00 1.73
375 376 2.017049 CAGCCTCGACCCAAAAATAGG 58.983 52.381 0.00 0.00 0.00 2.57
376 377 0.738975 GCCTCGACCCAAAAATAGGC 59.261 55.000 0.00 0.00 42.40 3.93
399 400 2.621526 CGGCCCAATACAAACCCTATTC 59.378 50.000 0.00 0.00 0.00 1.75
422 423 2.355837 GTCGCACGCTCTCCACAA 60.356 61.111 0.00 0.00 0.00 3.33
441 442 3.591254 AACGAACGAGCTGCTCCCC 62.591 63.158 22.97 11.44 0.00 4.81
512 513 2.438075 CCCAAGCAGAGCAGCCTC 60.438 66.667 0.00 0.00 38.42 4.70
514 515 1.449956 CCAAGCAGAGCAGCCTCTC 60.450 63.158 0.00 0.00 45.21 3.20
515 516 1.449956 CAAGCAGAGCAGCCTCTCC 60.450 63.158 0.00 0.00 45.21 3.71
516 517 1.613035 AAGCAGAGCAGCCTCTCCT 60.613 57.895 0.00 0.00 45.21 3.69
517 518 1.616091 AAGCAGAGCAGCCTCTCCTC 61.616 60.000 0.00 0.00 45.21 3.71
518 519 3.092780 GCAGAGCAGCCTCTCCTCC 62.093 68.421 0.00 0.00 45.21 4.30
519 520 2.042025 AGAGCAGCCTCTCCTCCC 60.042 66.667 0.00 0.00 45.21 4.30
521 522 4.067512 AGCAGCCTCTCCTCCCGA 62.068 66.667 0.00 0.00 0.00 5.14
522 523 3.844090 GCAGCCTCTCCTCCCGAC 61.844 72.222 0.00 0.00 0.00 4.79
530 531 4.051167 TCCTCCCGACGGCAGGTA 62.051 66.667 23.32 7.78 31.70 3.08
531 532 3.072468 CCTCCCGACGGCAGGTAA 61.072 66.667 16.34 0.00 0.00 2.85
532 533 2.183555 CTCCCGACGGCAGGTAAC 59.816 66.667 8.86 0.00 0.00 2.50
535 536 4.462280 CCGACGGCAGGTAACCCC 62.462 72.222 0.00 0.00 37.17 4.95
536 537 3.697747 CGACGGCAGGTAACCCCA 61.698 66.667 0.00 0.00 34.66 4.96
537 538 2.751688 GACGGCAGGTAACCCCAA 59.248 61.111 0.00 0.00 34.66 4.12
539 540 2.360726 CGGCAGGTAACCCCAACC 60.361 66.667 0.00 0.00 37.27 3.77
540 541 2.036731 GGCAGGTAACCCCAACCC 59.963 66.667 0.00 0.00 37.77 4.11
542 543 2.847650 GCAGGTAACCCCAACCCCA 61.848 63.158 0.00 0.00 37.77 4.96
543 544 1.382629 CAGGTAACCCCAACCCCAG 59.617 63.158 0.00 0.00 37.77 4.45
544 545 2.036731 GGTAACCCCAACCCCAGC 59.963 66.667 0.00 0.00 0.00 4.85
545 546 2.847650 GGTAACCCCAACCCCAGCA 61.848 63.158 0.00 0.00 0.00 4.41
546 547 1.304134 GTAACCCCAACCCCAGCAG 60.304 63.158 0.00 0.00 0.00 4.24
547 548 3.218386 TAACCCCAACCCCAGCAGC 62.218 63.158 0.00 0.00 0.00 5.25
550 551 4.748144 CCCAACCCCAGCAGCCTC 62.748 72.222 0.00 0.00 0.00 4.70
551 552 3.655211 CCAACCCCAGCAGCCTCT 61.655 66.667 0.00 0.00 0.00 3.69
552 553 2.045536 CAACCCCAGCAGCCTCTC 60.046 66.667 0.00 0.00 0.00 3.20
553 554 3.334054 AACCCCAGCAGCCTCTCC 61.334 66.667 0.00 0.00 0.00 3.71
554 555 3.880033 AACCCCAGCAGCCTCTCCT 62.880 63.158 0.00 0.00 0.00 3.69
555 556 3.478274 CCCCAGCAGCCTCTCCTC 61.478 72.222 0.00 0.00 0.00 3.71
556 557 2.686470 CCCAGCAGCCTCTCCTCA 60.686 66.667 0.00 0.00 0.00 3.86
557 558 2.296365 CCCAGCAGCCTCTCCTCAA 61.296 63.158 0.00 0.00 0.00 3.02
558 559 1.078567 CCAGCAGCCTCTCCTCAAC 60.079 63.158 0.00 0.00 0.00 3.18
559 560 1.078567 CAGCAGCCTCTCCTCAACC 60.079 63.158 0.00 0.00 0.00 3.77
560 561 2.270527 GCAGCCTCTCCTCAACCC 59.729 66.667 0.00 0.00 0.00 4.11
561 562 2.993853 CAGCCTCTCCTCAACCCC 59.006 66.667 0.00 0.00 0.00 4.95
562 563 1.614824 CAGCCTCTCCTCAACCCCT 60.615 63.158 0.00 0.00 0.00 4.79
563 564 1.162085 AGCCTCTCCTCAACCCCTT 59.838 57.895 0.00 0.00 0.00 3.95
564 565 0.912006 AGCCTCTCCTCAACCCCTTC 60.912 60.000 0.00 0.00 0.00 3.46
565 566 1.201429 GCCTCTCCTCAACCCCTTCA 61.201 60.000 0.00 0.00 0.00 3.02
566 567 1.589414 CCTCTCCTCAACCCCTTCAT 58.411 55.000 0.00 0.00 0.00 2.57
567 568 1.488393 CCTCTCCTCAACCCCTTCATC 59.512 57.143 0.00 0.00 0.00 2.92
568 569 2.476199 CTCTCCTCAACCCCTTCATCT 58.524 52.381 0.00 0.00 0.00 2.90
569 570 2.433970 CTCTCCTCAACCCCTTCATCTC 59.566 54.545 0.00 0.00 0.00 2.75
570 571 1.488393 CTCCTCAACCCCTTCATCTCC 59.512 57.143 0.00 0.00 0.00 3.71
571 572 0.179000 CCTCAACCCCTTCATCTCCG 59.821 60.000 0.00 0.00 0.00 4.63
572 573 0.905357 CTCAACCCCTTCATCTCCGT 59.095 55.000 0.00 0.00 0.00 4.69
573 574 0.613260 TCAACCCCTTCATCTCCGTG 59.387 55.000 0.00 0.00 0.00 4.94
574 575 0.613260 CAACCCCTTCATCTCCGTGA 59.387 55.000 0.00 0.00 0.00 4.35
575 576 0.613777 AACCCCTTCATCTCCGTGAC 59.386 55.000 0.00 0.00 0.00 3.67
576 577 0.252284 ACCCCTTCATCTCCGTGACT 60.252 55.000 0.00 0.00 0.00 3.41
577 578 0.905357 CCCCTTCATCTCCGTGACTT 59.095 55.000 0.00 0.00 0.00 3.01
578 579 1.406069 CCCCTTCATCTCCGTGACTTG 60.406 57.143 0.00 0.00 0.00 3.16
579 580 1.363744 CCTTCATCTCCGTGACTTGC 58.636 55.000 0.00 0.00 0.00 4.01
580 581 1.066573 CCTTCATCTCCGTGACTTGCT 60.067 52.381 0.00 0.00 0.00 3.91
581 582 2.166459 CCTTCATCTCCGTGACTTGCTA 59.834 50.000 0.00 0.00 0.00 3.49
596 597 2.042831 GCTACCCCTTGCTGTGCTG 61.043 63.158 0.00 0.00 0.00 4.41
614 615 1.746615 GGGCTGCTCGCTTGAATGA 60.747 57.895 0.00 0.00 39.13 2.57
646 678 2.957402 TCCTTTCTGGTTGTGATGCT 57.043 45.000 0.00 0.00 37.07 3.79
649 681 4.072131 TCCTTTCTGGTTGTGATGCTAAC 58.928 43.478 0.00 0.00 37.07 2.34
709 746 2.881111 AGAAACTGGGGTTAGCCTTC 57.119 50.000 0.00 0.00 34.90 3.46
719 756 3.433740 GGGGTTAGCCTTCTGTCCAATAG 60.434 52.174 0.00 0.00 34.45 1.73
720 757 3.200165 GGGTTAGCCTTCTGTCCAATAGT 59.800 47.826 0.00 0.00 34.45 2.12
721 758 4.407945 GGGTTAGCCTTCTGTCCAATAGTA 59.592 45.833 0.00 0.00 34.45 1.82
793 843 1.127343 GCTGGGCCTAGAGTCTTCAT 58.873 55.000 22.15 0.00 0.00 2.57
803 853 7.093112 GGGCCTAGAGTCTTCATATGATTACAT 60.093 40.741 6.17 4.13 40.16 2.29
848 900 0.839946 TGCTAGATTTCTCCCTGGCC 59.160 55.000 0.00 0.00 36.26 5.36
908 961 2.287248 GCACCTGTCTTTTCTTCTGCAC 60.287 50.000 0.00 0.00 0.00 4.57
942 996 3.374745 CGGTTTATCTGCATTGGATTGC 58.625 45.455 0.00 0.00 43.07 3.56
1128 1185 1.734465 GGCTATGCTATCAACCGCATC 59.266 52.381 0.00 0.00 44.98 3.91
1275 1333 5.187772 TGTGCTCTACAACAAGGATCACTAT 59.812 40.000 0.00 0.00 36.06 2.12
1484 1546 2.677524 GCACATGGCCAGGCTTCA 60.678 61.111 19.26 1.37 36.11 3.02
1509 1571 0.532417 TTGACCCAAACACCCGTACG 60.532 55.000 8.69 8.69 0.00 3.67
1551 1614 5.205759 CAAATGTTGGGAAGAGCTCTTTT 57.794 39.130 29.02 15.01 36.11 2.27
1596 1659 0.177141 TGGACGTACAGCCTTATGCC 59.823 55.000 0.00 0.00 42.71 4.40
1616 1681 4.058124 GCCTTCACAACAAAATCCCTTTC 58.942 43.478 0.00 0.00 0.00 2.62
1622 1687 4.270808 CACAACAAAATCCCTTTCTGTTGC 59.729 41.667 11.94 0.00 41.19 4.17
1623 1688 4.162131 ACAACAAAATCCCTTTCTGTTGCT 59.838 37.500 11.94 0.00 41.19 3.91
2147 2212 2.743928 GCCCAAGCCTCGTGACAG 60.744 66.667 0.00 0.00 0.00 3.51
2148 2213 3.059982 CCCAAGCCTCGTGACAGA 58.940 61.111 0.00 0.00 0.00 3.41
2154 2219 0.885196 AGCCTCGTGACAGAAGAGAC 59.115 55.000 4.59 0.00 32.22 3.36
2226 2291 4.742167 GCTGCAAAGGAAAAGAAGAAACTC 59.258 41.667 0.00 0.00 0.00 3.01
2238 2303 1.842052 AGAAACTCGAGAGGGACCTC 58.158 55.000 21.68 10.40 43.03 3.85
2256 2321 2.547642 CCTCGAGAATGAGAATGGAGGC 60.548 54.545 15.71 0.00 38.28 4.70
2271 2336 0.461961 GAGGCGCTGGTGTCTATTCT 59.538 55.000 7.64 0.00 0.00 2.40
2298 2363 7.495934 GCCAGTCTCAAGAAGCATTACTTATTA 59.504 37.037 0.00 0.00 37.72 0.98
2367 2432 4.584325 GGGCATAATGTTGCTGATTTCCTA 59.416 41.667 0.71 0.00 42.38 2.94
2502 2567 1.599542 GAACAGCGTGAGATATTGGGC 59.400 52.381 0.00 0.00 0.00 5.36
2511 2576 4.692625 CGTGAGATATTGGGCAAGATTAGG 59.307 45.833 0.00 0.00 0.00 2.69
2512 2577 5.511373 CGTGAGATATTGGGCAAGATTAGGA 60.511 44.000 0.00 0.00 0.00 2.94
2513 2578 6.299141 GTGAGATATTGGGCAAGATTAGGAA 58.701 40.000 0.00 0.00 0.00 3.36
2562 2630 5.221422 GCATAGGATGAAGAAGAGTACTGCT 60.221 44.000 0.00 0.00 32.48 4.24
2604 2672 4.946157 CCAAGGAAGCATGACAAAGATAGT 59.054 41.667 0.00 0.00 0.00 2.12
2663 2731 2.239654 CCATGGGTGTTGATCCTACTGT 59.760 50.000 2.85 0.00 0.00 3.55
2916 2990 2.160721 ACAGGAATAAGGAGGCTCGA 57.839 50.000 8.69 0.00 0.00 4.04
2955 3029 1.153539 TCATCCCCACCTTGAAACCA 58.846 50.000 0.00 0.00 0.00 3.67
3146 3226 5.891551 TGTTTCTTTTTCATAGGGATAGGGC 59.108 40.000 0.00 0.00 0.00 5.19
3163 3243 6.205658 GGATAGGGCTGTTAAATCTTGACATC 59.794 42.308 0.00 0.00 0.00 3.06
3173 3253 7.971722 TGTTAAATCTTGACATCATGCTGATTG 59.028 33.333 3.02 0.00 34.28 2.67
3218 3299 1.305201 CCAGCACCGTTGTTGTAGTT 58.695 50.000 0.00 0.00 32.21 2.24
3248 3333 6.072064 GGTTGTTCTGTAGTAAGCTGAGAGTA 60.072 42.308 0.00 0.00 0.00 2.59
3251 3336 6.715718 TGTTCTGTAGTAAGCTGAGAGTAGTT 59.284 38.462 0.00 0.00 0.00 2.24
3260 3347 8.561212 AGTAAGCTGAGAGTAGTTTACATATCG 58.439 37.037 12.70 0.00 42.95 2.92
3284 3371 6.092122 CGTACTGCACTCTCAAATTGGATTAA 59.908 38.462 0.00 0.00 0.00 1.40
3338 3426 2.002586 CCGCTATCACAAACTGGTCAG 58.997 52.381 0.00 0.00 0.00 3.51
3407 3496 4.842574 TGCTTGAGCTACATCCACATTTA 58.157 39.130 4.44 0.00 42.66 1.40
3409 3498 5.297527 TGCTTGAGCTACATCCACATTTATG 59.702 40.000 4.44 0.00 42.66 1.90
3466 3560 5.742562 TTTTCCCATATGGATAGGGTTGT 57.257 39.130 24.00 0.00 44.66 3.32
3468 3562 4.722526 TCCCATATGGATAGGGTTGTTG 57.277 45.455 24.00 1.61 43.31 3.33
3470 3564 4.919510 TCCCATATGGATAGGGTTGTTGAT 59.080 41.667 24.00 0.00 43.31 2.57
3471 3565 5.014123 TCCCATATGGATAGGGTTGTTGATC 59.986 44.000 24.00 0.00 43.31 2.92
3472 3566 5.014544 CCCATATGGATAGGGTTGTTGATCT 59.985 44.000 24.00 0.00 37.81 2.75
3473 3567 6.467775 CCCATATGGATAGGGTTGTTGATCTT 60.468 42.308 24.00 0.00 37.81 2.40
3474 3568 6.432162 CCATATGGATAGGGTTGTTGATCTTG 59.568 42.308 17.49 0.00 37.39 3.02
3480 3574 6.238484 GGATAGGGTTGTTGATCTTGAAATCG 60.238 42.308 0.00 0.00 0.00 3.34
3505 3599 7.011189 GTGCTGATTTTGTAAATTGAATGCAC 58.989 34.615 0.00 0.00 37.86 4.57
3506 3600 6.147492 TGCTGATTTTGTAAATTGAATGCACC 59.853 34.615 0.00 0.00 0.00 5.01
3507 3601 6.147492 GCTGATTTTGTAAATTGAATGCACCA 59.853 34.615 0.00 0.00 0.00 4.17
3509 3603 5.921004 TTTTGTAAATTGAATGCACCAGC 57.079 34.783 0.00 0.00 42.57 4.85
3519 3613 3.357079 GCACCAGCACCGACCTTG 61.357 66.667 0.00 0.00 41.58 3.61
3579 3686 3.365832 CATATCGTGCTGCACCAAATTC 58.634 45.455 25.61 0.51 0.00 2.17
3583 3690 1.791555 CGTGCTGCACCAAATTCGATC 60.792 52.381 25.61 0.00 0.00 3.69
3588 3695 2.743664 CTGCACCAAATTCGATCAGTGA 59.256 45.455 0.00 0.00 0.00 3.41
3633 3740 5.616488 AATAAATACACGAAAGCACCGTT 57.384 34.783 0.00 0.00 38.29 4.44
3645 3752 0.732538 GCACCGTTGCCATAAACTGC 60.733 55.000 0.00 0.00 43.66 4.40
3661 3768 0.099968 CTGCCGATTGGTGATGCAAG 59.900 55.000 0.00 0.00 37.67 4.01
3662 3769 1.226773 GCCGATTGGTGATGCAAGC 60.227 57.895 0.00 0.00 37.67 4.01
3663 3770 1.936436 GCCGATTGGTGATGCAAGCA 61.936 55.000 0.00 0.00 37.67 3.91
3664 3771 0.527113 CCGATTGGTGATGCAAGCAA 59.473 50.000 5.55 5.55 41.41 3.91
3716 3829 8.892723 CACATATGTTTATTGGAAGCTCAACTA 58.107 33.333 5.37 0.00 0.00 2.24
3762 3879 2.030007 TCACTGCTATTTTTGGTGCTGC 60.030 45.455 0.00 0.00 0.00 5.25
3763 3880 1.962807 ACTGCTATTTTTGGTGCTGCA 59.037 42.857 0.00 0.00 0.00 4.41
3771 3888 7.025963 GCTATTTTTGGTGCTGCATATCTATC 58.974 38.462 5.27 0.00 0.00 2.08
3772 3889 6.964807 ATTTTTGGTGCTGCATATCTATCA 57.035 33.333 5.27 0.00 0.00 2.15
3773 3890 5.756195 TTTTGGTGCTGCATATCTATCAC 57.244 39.130 5.27 0.00 0.00 3.06
3785 3902 1.860641 TCTATCACGGGAGGCTTGAA 58.139 50.000 0.00 0.00 0.00 2.69
3786 3903 2.184533 TCTATCACGGGAGGCTTGAAA 58.815 47.619 0.00 0.00 0.00 2.69
3789 3906 0.536460 TCACGGGAGGCTTGAAAACC 60.536 55.000 0.00 0.00 0.00 3.27
3790 3907 0.821711 CACGGGAGGCTTGAAAACCA 60.822 55.000 0.00 0.00 0.00 3.67
3791 3908 0.106419 ACGGGAGGCTTGAAAACCAA 60.106 50.000 0.00 0.00 0.00 3.67
3850 3967 8.417106 TCTACATTTTCATTTTTGCCTGTTACA 58.583 29.630 0.00 0.00 0.00 2.41
3852 3969 7.047271 ACATTTTCATTTTTGCCTGTTACACT 58.953 30.769 0.00 0.00 0.00 3.55
3876 3993 9.520515 ACTTTGTCCTCATTTGTTAGATTATGT 57.479 29.630 0.00 0.00 0.00 2.29
3887 4004 5.588240 TGTTAGATTATGTCGATCGTTGCT 58.412 37.500 15.94 6.78 0.00 3.91
3896 4013 2.341760 GTCGATCGTTGCTGAAGTGTAC 59.658 50.000 15.94 0.00 0.00 2.90
3898 4015 1.059264 GATCGTTGCTGAAGTGTACGC 59.941 52.381 0.00 0.00 32.65 4.42
3899 4016 0.249114 TCGTTGCTGAAGTGTACGCA 60.249 50.000 9.48 0.00 32.65 5.24
3901 4018 1.004398 CGTTGCTGAAGTGTACGCAAA 60.004 47.619 9.48 0.00 43.11 3.68
3902 4019 2.349438 CGTTGCTGAAGTGTACGCAAAT 60.349 45.455 9.48 0.00 43.11 2.32
3916 4033 6.421202 GTGTACGCAAATTTTGGTTTATTCCA 59.579 34.615 10.96 0.00 35.49 3.53
3918 4035 5.360591 ACGCAAATTTTGGTTTATTCCACA 58.639 33.333 10.96 0.00 37.20 4.17
3921 4038 6.018343 CGCAAATTTTGGTTTATTCCACACTT 60.018 34.615 10.96 0.00 37.20 3.16
3936 4053 1.559682 ACACTTGTGTGGAGTGGACTT 59.440 47.619 5.53 0.00 46.77 3.01
3952 4069 7.384932 GGAGTGGACTTAAATTTTGTTTGATGG 59.615 37.037 0.00 0.00 0.00 3.51
3956 4073 7.708752 TGGACTTAAATTTTGTTTGATGGTGTC 59.291 33.333 0.00 0.00 0.00 3.67
3957 4074 7.708752 GGACTTAAATTTTGTTTGATGGTGTCA 59.291 33.333 0.00 0.00 34.25 3.58
3958 4075 9.092876 GACTTAAATTTTGTTTGATGGTGTCAA 57.907 29.630 0.00 0.00 44.87 3.18
3959 4076 9.612066 ACTTAAATTTTGTTTGATGGTGTCAAT 57.388 25.926 0.00 0.00 45.77 2.57
3960 4077 9.866936 CTTAAATTTTGTTTGATGGTGTCAATG 57.133 29.630 0.00 0.00 45.77 2.82
3961 4078 7.862512 AAATTTTGTTTGATGGTGTCAATGT 57.137 28.000 0.00 0.00 45.77 2.71
3962 4079 6.847956 ATTTTGTTTGATGGTGTCAATGTG 57.152 33.333 0.00 0.00 45.77 3.21
3963 4080 3.367992 TGTTTGATGGTGTCAATGTGC 57.632 42.857 0.00 0.00 45.77 4.57
3964 4081 2.957680 TGTTTGATGGTGTCAATGTGCT 59.042 40.909 0.00 0.00 45.77 4.40
3965 4082 3.243468 TGTTTGATGGTGTCAATGTGCTG 60.243 43.478 0.00 0.00 45.77 4.41
3966 4083 1.536940 TGATGGTGTCAATGTGCTGG 58.463 50.000 0.00 0.00 32.78 4.85
3967 4084 1.073603 TGATGGTGTCAATGTGCTGGA 59.926 47.619 0.00 0.00 32.78 3.86
3968 4085 2.161855 GATGGTGTCAATGTGCTGGAA 58.838 47.619 0.00 0.00 0.00 3.53
3969 4086 1.317613 TGGTGTCAATGTGCTGGAAC 58.682 50.000 0.00 0.00 0.00 3.62
3970 4087 0.238289 GGTGTCAATGTGCTGGAACG 59.762 55.000 0.00 0.00 0.00 3.95
3971 4088 0.238289 GTGTCAATGTGCTGGAACGG 59.762 55.000 0.00 0.00 38.10 4.44
3972 4089 0.888736 TGTCAATGTGCTGGAACGGG 60.889 55.000 0.00 0.00 33.56 5.28
3973 4090 0.889186 GTCAATGTGCTGGAACGGGT 60.889 55.000 0.00 0.00 33.56 5.28
3974 4091 0.605319 TCAATGTGCTGGAACGGGTC 60.605 55.000 0.00 0.00 33.56 4.46
3975 4092 1.671054 AATGTGCTGGAACGGGTCG 60.671 57.895 0.00 0.00 33.56 4.79
3976 4093 4.980805 TGTGCTGGAACGGGTCGC 62.981 66.667 0.00 0.00 33.56 5.19
3977 4094 4.681978 GTGCTGGAACGGGTCGCT 62.682 66.667 0.00 0.00 33.56 4.93
3978 4095 4.680237 TGCTGGAACGGGTCGCTG 62.680 66.667 0.00 0.00 33.56 5.18
3980 4097 4.003788 CTGGAACGGGTCGCTGGT 62.004 66.667 0.00 0.00 0.00 4.00
3981 4098 3.530910 CTGGAACGGGTCGCTGGTT 62.531 63.158 0.00 0.00 0.00 3.67
3982 4099 2.741211 GGAACGGGTCGCTGGTTC 60.741 66.667 0.00 0.00 39.38 3.62
3983 4100 2.342648 GAACGGGTCGCTGGTTCT 59.657 61.111 0.00 0.00 37.62 3.01
3984 4101 1.301479 GAACGGGTCGCTGGTTCTT 60.301 57.895 0.00 0.00 37.62 2.52
3985 4102 0.037975 GAACGGGTCGCTGGTTCTTA 60.038 55.000 0.00 0.00 37.62 2.10
3986 4103 0.320160 AACGGGTCGCTGGTTCTTAC 60.320 55.000 0.00 0.00 0.00 2.34
3987 4104 1.183676 ACGGGTCGCTGGTTCTTACT 61.184 55.000 0.00 0.00 0.00 2.24
3988 4105 0.037605 CGGGTCGCTGGTTCTTACTT 60.038 55.000 0.00 0.00 0.00 2.24
3989 4106 1.607251 CGGGTCGCTGGTTCTTACTTT 60.607 52.381 0.00 0.00 0.00 2.66
3990 4107 2.501261 GGGTCGCTGGTTCTTACTTTT 58.499 47.619 0.00 0.00 0.00 2.27
3991 4108 3.667360 GGGTCGCTGGTTCTTACTTTTA 58.333 45.455 0.00 0.00 0.00 1.52
3992 4109 4.259356 GGGTCGCTGGTTCTTACTTTTAT 58.741 43.478 0.00 0.00 0.00 1.40
3993 4110 5.422145 GGGTCGCTGGTTCTTACTTTTATA 58.578 41.667 0.00 0.00 0.00 0.98
3994 4111 5.292834 GGGTCGCTGGTTCTTACTTTTATAC 59.707 44.000 0.00 0.00 0.00 1.47
3995 4112 6.104665 GGTCGCTGGTTCTTACTTTTATACT 58.895 40.000 0.00 0.00 0.00 2.12
3996 4113 6.035758 GGTCGCTGGTTCTTACTTTTATACTG 59.964 42.308 0.00 0.00 0.00 2.74
3997 4114 6.810182 GTCGCTGGTTCTTACTTTTATACTGA 59.190 38.462 0.00 0.00 0.00 3.41
3998 4115 7.330208 GTCGCTGGTTCTTACTTTTATACTGAA 59.670 37.037 0.00 0.00 0.00 3.02
3999 4116 7.544566 TCGCTGGTTCTTACTTTTATACTGAAG 59.455 37.037 0.00 0.00 0.00 3.02
4000 4117 7.331193 CGCTGGTTCTTACTTTTATACTGAAGT 59.669 37.037 0.00 0.00 39.32 3.01
4001 4118 8.443937 GCTGGTTCTTACTTTTATACTGAAGTG 58.556 37.037 0.00 0.00 36.79 3.16
4002 4119 9.490379 CTGGTTCTTACTTTTATACTGAAGTGT 57.510 33.333 0.00 0.00 36.79 3.55
4003 4120 9.268268 TGGTTCTTACTTTTATACTGAAGTGTG 57.732 33.333 0.00 0.00 36.79 3.82
4004 4121 9.269453 GGTTCTTACTTTTATACTGAAGTGTGT 57.731 33.333 0.00 0.00 36.79 3.72
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
97 98 2.751436 CCAACCGGTCCAGGCATG 60.751 66.667 8.04 0.00 33.69 4.06
98 99 4.047125 CCCAACCGGTCCAGGCAT 62.047 66.667 8.04 0.00 33.69 4.40
100 101 3.961414 TTCCCAACCGGTCCAGGC 61.961 66.667 8.04 0.00 33.69 4.85
101 102 2.033602 GTTCCCAACCGGTCCAGG 59.966 66.667 8.04 10.88 37.30 4.45
102 103 2.033602 GGTTCCCAACCGGTCCAG 59.966 66.667 8.04 0.18 42.62 3.86
129 130 2.500229 TCACTGATCCGGTTTTGGAAC 58.500 47.619 0.00 0.00 42.46 3.62
130 131 2.940994 TCACTGATCCGGTTTTGGAA 57.059 45.000 0.00 0.00 42.46 3.53
131 132 2.940994 TTCACTGATCCGGTTTTGGA 57.059 45.000 0.00 0.00 43.58 3.53
132 133 2.095853 CGATTCACTGATCCGGTTTTGG 59.904 50.000 0.00 0.00 0.00 3.28
133 134 2.476185 GCGATTCACTGATCCGGTTTTG 60.476 50.000 0.00 0.00 0.00 2.44
134 135 1.737793 GCGATTCACTGATCCGGTTTT 59.262 47.619 0.00 0.00 0.00 2.43
135 136 1.369625 GCGATTCACTGATCCGGTTT 58.630 50.000 0.00 0.00 0.00 3.27
136 137 0.806102 CGCGATTCACTGATCCGGTT 60.806 55.000 0.00 0.00 0.00 4.44
137 138 1.226974 CGCGATTCACTGATCCGGT 60.227 57.895 0.00 0.00 0.00 5.28
138 139 2.589492 GCGCGATTCACTGATCCGG 61.589 63.158 12.10 0.00 0.00 5.14
139 140 1.420641 TTGCGCGATTCACTGATCCG 61.421 55.000 12.10 0.00 0.00 4.18
140 141 0.940126 ATTGCGCGATTCACTGATCC 59.060 50.000 12.10 0.00 0.00 3.36
141 142 1.333524 CCATTGCGCGATTCACTGATC 60.334 52.381 12.10 0.00 0.00 2.92
142 143 0.659427 CCATTGCGCGATTCACTGAT 59.341 50.000 12.10 0.00 0.00 2.90
143 144 1.368345 CCCATTGCGCGATTCACTGA 61.368 55.000 12.10 0.00 0.00 3.41
144 145 1.063006 CCCATTGCGCGATTCACTG 59.937 57.895 12.10 2.62 0.00 3.66
145 146 2.764314 GCCCATTGCGCGATTCACT 61.764 57.895 12.10 0.00 0.00 3.41
146 147 2.278142 GCCCATTGCGCGATTCAC 60.278 61.111 12.10 0.00 0.00 3.18
147 148 3.517140 GGCCCATTGCGCGATTCA 61.517 61.111 12.10 0.00 42.61 2.57
148 149 4.612536 CGGCCCATTGCGCGATTC 62.613 66.667 12.10 0.00 42.61 2.52
161 162 2.178235 GCGACTAAATGGGACGGCC 61.178 63.158 0.00 0.00 0.00 6.13
162 163 1.153429 AGCGACTAAATGGGACGGC 60.153 57.895 0.00 0.00 0.00 5.68
163 164 0.810031 CCAGCGACTAAATGGGACGG 60.810 60.000 0.00 0.00 0.00 4.79
164 165 1.429148 GCCAGCGACTAAATGGGACG 61.429 60.000 0.00 0.00 34.52 4.79
165 166 1.429148 CGCCAGCGACTAAATGGGAC 61.429 60.000 6.06 0.00 42.83 4.46
166 167 1.153449 CGCCAGCGACTAAATGGGA 60.153 57.895 6.06 0.00 42.83 4.37
167 168 1.429148 GACGCCAGCGACTAAATGGG 61.429 60.000 20.32 0.00 42.83 4.00
168 169 1.752501 CGACGCCAGCGACTAAATGG 61.753 60.000 20.32 0.00 42.83 3.16
169 170 1.631072 CGACGCCAGCGACTAAATG 59.369 57.895 20.32 0.00 42.83 2.32
170 171 2.165301 GCGACGCCAGCGACTAAAT 61.165 57.895 20.32 0.00 42.83 1.40
171 172 2.807895 GCGACGCCAGCGACTAAA 60.808 61.111 20.32 0.00 42.83 1.85
189 190 2.715005 TGCAAACGCACAGACAGC 59.285 55.556 0.00 0.00 33.43 4.40
197 198 0.522286 CAAGTTGTCGTGCAAACGCA 60.522 50.000 0.00 0.00 39.03 5.24
198 199 0.247894 TCAAGTTGTCGTGCAAACGC 60.248 50.000 2.11 0.00 39.03 4.84
199 200 1.452717 GTCAAGTTGTCGTGCAAACG 58.547 50.000 2.11 0.00 39.03 3.60
200 201 1.452717 CGTCAAGTTGTCGTGCAAAC 58.547 50.000 13.35 0.00 39.03 2.93
201 202 0.247894 GCGTCAAGTTGTCGTGCAAA 60.248 50.000 20.64 0.00 39.03 3.68
202 203 1.350319 GCGTCAAGTTGTCGTGCAA 59.650 52.632 20.64 0.00 31.86 4.08
203 204 1.362406 TTGCGTCAAGTTGTCGTGCA 61.362 50.000 20.64 14.53 31.86 4.57
204 205 0.041312 ATTGCGTCAAGTTGTCGTGC 60.041 50.000 20.64 12.50 31.86 5.34
205 206 3.469629 CTTATTGCGTCAAGTTGTCGTG 58.530 45.455 20.64 3.81 31.86 4.35
206 207 2.096417 GCTTATTGCGTCAAGTTGTCGT 60.096 45.455 20.64 6.81 31.86 4.34
207 208 2.495939 GCTTATTGCGTCAAGTTGTCG 58.504 47.619 16.60 16.60 32.37 4.35
219 220 5.941948 AAACCCTATATGACGCTTATTGC 57.058 39.130 0.00 0.00 38.57 3.56
220 221 6.142817 GCAAAACCCTATATGACGCTTATTG 58.857 40.000 0.00 0.00 0.00 1.90
221 222 5.240844 GGCAAAACCCTATATGACGCTTATT 59.759 40.000 0.00 0.00 0.00 1.40
222 223 4.760204 GGCAAAACCCTATATGACGCTTAT 59.240 41.667 0.00 0.00 0.00 1.73
223 224 4.131596 GGCAAAACCCTATATGACGCTTA 58.868 43.478 0.00 0.00 0.00 3.09
224 225 2.949644 GGCAAAACCCTATATGACGCTT 59.050 45.455 0.00 0.00 0.00 4.68
225 226 2.572290 GGCAAAACCCTATATGACGCT 58.428 47.619 0.00 0.00 0.00 5.07
226 227 1.263217 CGGCAAAACCCTATATGACGC 59.737 52.381 0.00 0.00 37.51 5.19
227 228 2.828877 TCGGCAAAACCCTATATGACG 58.171 47.619 0.00 0.00 45.40 4.35
228 229 5.106673 GCTAATCGGCAAAACCCTATATGAC 60.107 44.000 0.00 0.00 33.26 3.06
229 230 5.001232 GCTAATCGGCAAAACCCTATATGA 58.999 41.667 0.00 0.00 33.26 2.15
230 231 4.156008 GGCTAATCGGCAAAACCCTATATG 59.844 45.833 0.00 0.00 38.25 1.78
231 232 4.042934 AGGCTAATCGGCAAAACCCTATAT 59.957 41.667 0.00 0.00 41.46 0.86
232 233 3.393278 AGGCTAATCGGCAAAACCCTATA 59.607 43.478 0.00 0.00 41.46 1.31
233 234 2.174854 AGGCTAATCGGCAAAACCCTAT 59.825 45.455 0.00 0.00 41.46 2.57
234 235 1.562475 AGGCTAATCGGCAAAACCCTA 59.438 47.619 0.00 0.00 41.46 3.53
235 236 0.331616 AGGCTAATCGGCAAAACCCT 59.668 50.000 0.00 0.00 41.46 4.34
236 237 2.047002 TAGGCTAATCGGCAAAACCC 57.953 50.000 0.00 0.00 41.46 4.11
237 238 3.211045 TGATAGGCTAATCGGCAAAACC 58.789 45.455 0.00 0.00 41.46 3.27
238 239 5.438761 AATGATAGGCTAATCGGCAAAAC 57.561 39.130 0.00 0.00 41.46 2.43
239 240 7.665559 AGATTAATGATAGGCTAATCGGCAAAA 59.334 33.333 0.00 0.00 41.46 2.44
240 241 7.168219 AGATTAATGATAGGCTAATCGGCAAA 58.832 34.615 0.00 0.00 41.46 3.68
241 242 6.711277 AGATTAATGATAGGCTAATCGGCAA 58.289 36.000 0.00 0.00 41.46 4.52
242 243 6.299805 AGATTAATGATAGGCTAATCGGCA 57.700 37.500 0.00 0.00 41.46 5.69
243 244 6.818644 TCAAGATTAATGATAGGCTAATCGGC 59.181 38.462 0.00 0.00 37.21 5.54
244 245 8.954950 ATCAAGATTAATGATAGGCTAATCGG 57.045 34.615 0.00 0.00 37.21 4.18
245 246 9.814899 AGATCAAGATTAATGATAGGCTAATCG 57.185 33.333 0.00 0.00 37.64 3.34
247 248 9.814899 CGAGATCAAGATTAATGATAGGCTAAT 57.185 33.333 0.00 0.00 37.64 1.73
248 249 8.253810 CCGAGATCAAGATTAATGATAGGCTAA 58.746 37.037 0.00 0.00 37.64 3.09
249 250 7.631594 GCCGAGATCAAGATTAATGATAGGCTA 60.632 40.741 16.15 0.00 42.64 3.93
250 251 6.638610 CCGAGATCAAGATTAATGATAGGCT 58.361 40.000 0.00 0.00 37.64 4.58
251 252 5.293079 GCCGAGATCAAGATTAATGATAGGC 59.707 44.000 11.83 11.83 41.13 3.93
252 253 5.814705 GGCCGAGATCAAGATTAATGATAGG 59.185 44.000 0.00 0.00 37.64 2.57
253 254 5.814705 GGGCCGAGATCAAGATTAATGATAG 59.185 44.000 0.00 0.00 37.64 2.08
254 255 5.248248 TGGGCCGAGATCAAGATTAATGATA 59.752 40.000 0.00 0.00 37.64 2.15
255 256 4.042062 TGGGCCGAGATCAAGATTAATGAT 59.958 41.667 0.00 0.00 40.14 2.45
256 257 3.390967 TGGGCCGAGATCAAGATTAATGA 59.609 43.478 0.00 0.00 0.00 2.57
257 258 3.743521 TGGGCCGAGATCAAGATTAATG 58.256 45.455 0.00 0.00 0.00 1.90
258 259 4.437682 TTGGGCCGAGATCAAGATTAAT 57.562 40.909 0.00 0.00 0.00 1.40
259 260 3.924114 TTGGGCCGAGATCAAGATTAA 57.076 42.857 0.00 0.00 0.00 1.40
260 261 3.924114 TTTGGGCCGAGATCAAGATTA 57.076 42.857 0.00 0.00 0.00 1.75
261 262 2.806945 TTTGGGCCGAGATCAAGATT 57.193 45.000 0.00 0.00 0.00 2.40
262 263 2.806945 TTTTGGGCCGAGATCAAGAT 57.193 45.000 0.00 0.00 0.00 2.40
263 264 2.039746 TCTTTTTGGGCCGAGATCAAGA 59.960 45.455 0.00 1.05 0.00 3.02
264 265 2.436417 TCTTTTTGGGCCGAGATCAAG 58.564 47.619 0.00 0.00 0.00 3.02
265 266 2.577606 TCTTTTTGGGCCGAGATCAA 57.422 45.000 0.00 0.00 0.00 2.57
266 267 2.643551 GATCTTTTTGGGCCGAGATCA 58.356 47.619 23.03 1.59 42.45 2.92
267 268 1.950216 GGATCTTTTTGGGCCGAGATC 59.050 52.381 21.26 21.26 42.27 2.75
268 269 1.566231 AGGATCTTTTTGGGCCGAGAT 59.434 47.619 10.17 10.17 0.00 2.75
269 270 0.991920 AGGATCTTTTTGGGCCGAGA 59.008 50.000 0.00 0.00 0.00 4.04
270 271 1.098050 CAGGATCTTTTTGGGCCGAG 58.902 55.000 0.00 0.00 0.00 4.63
271 272 0.695924 TCAGGATCTTTTTGGGCCGA 59.304 50.000 0.00 0.00 0.00 5.54
272 273 1.098050 CTCAGGATCTTTTTGGGCCG 58.902 55.000 0.00 0.00 0.00 6.13
273 274 1.478631 CCTCAGGATCTTTTTGGGCC 58.521 55.000 0.00 0.00 0.00 5.80
274 275 0.820226 GCCTCAGGATCTTTTTGGGC 59.180 55.000 0.00 0.00 0.00 5.36
275 276 2.521547 AGCCTCAGGATCTTTTTGGG 57.478 50.000 0.00 0.00 0.00 4.12
276 277 3.549794 CCTAGCCTCAGGATCTTTTTGG 58.450 50.000 0.00 0.00 38.00 3.28
277 278 2.948315 GCCTAGCCTCAGGATCTTTTTG 59.052 50.000 0.00 0.00 38.00 2.44
278 279 2.092158 GGCCTAGCCTCAGGATCTTTTT 60.092 50.000 0.00 0.00 46.69 1.94
279 280 1.492599 GGCCTAGCCTCAGGATCTTTT 59.507 52.381 0.00 0.00 46.69 2.27
280 281 1.135960 GGCCTAGCCTCAGGATCTTT 58.864 55.000 0.00 0.00 46.69 2.52
281 282 2.847201 GGCCTAGCCTCAGGATCTT 58.153 57.895 0.00 0.00 46.69 2.40
282 283 4.637663 GGCCTAGCCTCAGGATCT 57.362 61.111 0.00 0.00 46.69 2.75
292 293 0.885196 CCGAGACATAGAGGCCTAGC 59.115 60.000 4.42 0.00 0.00 3.42
293 294 0.885196 GCCGAGACATAGAGGCCTAG 59.115 60.000 4.42 0.00 43.54 3.02
294 295 3.037941 GCCGAGACATAGAGGCCTA 57.962 57.895 4.42 0.00 43.54 3.93
295 296 3.863606 GCCGAGACATAGAGGCCT 58.136 61.111 3.86 3.86 43.54 5.19
298 299 0.744874 TTTCGGCCGAGACATAGAGG 59.255 55.000 29.20 0.00 0.00 3.69
299 300 2.579207 TTTTCGGCCGAGACATAGAG 57.421 50.000 29.20 0.00 0.00 2.43
300 301 2.028839 TGTTTTTCGGCCGAGACATAGA 60.029 45.455 29.20 8.92 0.00 1.98
301 302 2.343101 TGTTTTTCGGCCGAGACATAG 58.657 47.619 29.20 0.00 0.00 2.23
302 303 2.343101 CTGTTTTTCGGCCGAGACATA 58.657 47.619 29.10 17.82 0.00 2.29
303 304 1.156736 CTGTTTTTCGGCCGAGACAT 58.843 50.000 29.10 0.00 0.00 3.06
304 305 0.882927 CCTGTTTTTCGGCCGAGACA 60.883 55.000 29.20 28.39 0.00 3.41
305 306 1.866925 CCTGTTTTTCGGCCGAGAC 59.133 57.895 29.20 25.67 0.00 3.36
306 307 1.964373 GCCTGTTTTTCGGCCGAGA 60.964 57.895 29.20 22.58 40.43 4.04
307 308 2.561373 GCCTGTTTTTCGGCCGAG 59.439 61.111 29.20 15.95 40.43 4.63
311 312 2.561373 CCGAGCCTGTTTTTCGGC 59.439 61.111 0.00 0.00 46.10 5.54
313 314 2.561373 GGCCGAGCCTGTTTTTCG 59.439 61.111 7.58 0.00 46.69 3.46
323 324 1.632948 GACGTACTTTTGGGCCGAGC 61.633 60.000 0.00 0.00 0.00 5.03
324 325 0.037605 AGACGTACTTTTGGGCCGAG 60.038 55.000 0.00 0.00 0.00 4.63
325 326 0.037975 GAGACGTACTTTTGGGCCGA 60.038 55.000 0.00 0.00 0.00 5.54
326 327 1.349259 CGAGACGTACTTTTGGGCCG 61.349 60.000 0.00 0.00 0.00 6.13
327 328 1.017701 CCGAGACGTACTTTTGGGCC 61.018 60.000 0.00 0.00 0.00 5.80
328 329 1.632948 GCCGAGACGTACTTTTGGGC 61.633 60.000 0.51 0.51 0.00 5.36
329 330 1.017701 GGCCGAGACGTACTTTTGGG 61.018 60.000 0.00 0.00 0.00 4.12
330 331 1.017701 GGGCCGAGACGTACTTTTGG 61.018 60.000 0.00 0.00 0.00 3.28
331 332 0.320073 TGGGCCGAGACGTACTTTTG 60.320 55.000 0.00 0.00 0.00 2.44
332 333 0.393820 TTGGGCCGAGACGTACTTTT 59.606 50.000 0.00 0.00 0.00 2.27
333 334 0.393820 TTTGGGCCGAGACGTACTTT 59.606 50.000 0.00 0.00 0.00 2.66
334 335 0.393820 TTTTGGGCCGAGACGTACTT 59.606 50.000 0.00 0.00 0.00 2.24
335 336 0.393820 TTTTTGGGCCGAGACGTACT 59.606 50.000 0.00 0.00 0.00 2.73
336 337 0.514255 GTTTTTGGGCCGAGACGTAC 59.486 55.000 0.00 0.00 0.00 3.67
337 338 0.106335 TGTTTTTGGGCCGAGACGTA 59.894 50.000 0.00 0.00 0.00 3.57
338 339 1.153127 TGTTTTTGGGCCGAGACGT 60.153 52.632 0.00 0.00 0.00 4.34
339 340 1.574428 CTGTTTTTGGGCCGAGACG 59.426 57.895 0.00 0.00 0.00 4.18
340 341 1.285950 GCTGTTTTTGGGCCGAGAC 59.714 57.895 0.00 0.43 0.00 3.36
341 342 1.901464 GGCTGTTTTTGGGCCGAGA 60.901 57.895 0.00 0.00 36.37 4.04
342 343 2.650778 GGCTGTTTTTGGGCCGAG 59.349 61.111 0.00 0.00 36.37 4.63
345 346 1.901464 TCGAGGCTGTTTTTGGGCC 60.901 57.895 0.00 0.00 45.57 5.80
346 347 1.285950 GTCGAGGCTGTTTTTGGGC 59.714 57.895 0.00 0.00 0.00 5.36
347 348 1.524008 GGGTCGAGGCTGTTTTTGGG 61.524 60.000 0.00 0.00 0.00 4.12
348 349 0.821711 TGGGTCGAGGCTGTTTTTGG 60.822 55.000 0.00 0.00 0.00 3.28
349 350 1.028905 TTGGGTCGAGGCTGTTTTTG 58.971 50.000 0.00 0.00 0.00 2.44
350 351 1.770294 TTTGGGTCGAGGCTGTTTTT 58.230 45.000 0.00 0.00 0.00 1.94
351 352 1.770294 TTTTGGGTCGAGGCTGTTTT 58.230 45.000 0.00 0.00 0.00 2.43
352 353 1.770294 TTTTTGGGTCGAGGCTGTTT 58.230 45.000 0.00 0.00 0.00 2.83
353 354 1.995376 ATTTTTGGGTCGAGGCTGTT 58.005 45.000 0.00 0.00 0.00 3.16
354 355 2.618045 CCTATTTTTGGGTCGAGGCTGT 60.618 50.000 0.00 0.00 0.00 4.40
355 356 2.017049 CCTATTTTTGGGTCGAGGCTG 58.983 52.381 0.00 0.00 0.00 4.85
356 357 1.682087 GCCTATTTTTGGGTCGAGGCT 60.682 52.381 3.47 0.00 44.94 4.58
357 358 0.738975 GCCTATTTTTGGGTCGAGGC 59.261 55.000 0.00 0.00 42.45 4.70
358 359 2.289565 GAGCCTATTTTTGGGTCGAGG 58.710 52.381 0.00 0.00 41.36 4.63
362 363 0.738975 GCCGAGCCTATTTTTGGGTC 59.261 55.000 0.00 0.00 45.56 4.46
363 364 0.683179 GGCCGAGCCTATTTTTGGGT 60.683 55.000 7.58 0.00 46.69 4.51
364 365 2.115510 GGCCGAGCCTATTTTTGGG 58.884 57.895 7.58 0.00 46.69 4.12
375 376 1.663379 GGGTTTGTATTGGGCCGAGC 61.663 60.000 0.00 0.00 0.00 5.03
376 377 0.034477 AGGGTTTGTATTGGGCCGAG 60.034 55.000 0.00 0.00 0.00 4.63
414 415 1.202486 AGCTCGTTCGTTTTGTGGAGA 60.202 47.619 0.00 0.00 0.00 3.71
415 416 1.070577 CAGCTCGTTCGTTTTGTGGAG 60.071 52.381 0.00 0.00 0.00 3.86
416 417 0.934496 CAGCTCGTTCGTTTTGTGGA 59.066 50.000 0.00 0.00 0.00 4.02
417 418 0.657368 GCAGCTCGTTCGTTTTGTGG 60.657 55.000 0.00 0.00 0.00 4.17
422 423 1.668151 GGGAGCAGCTCGTTCGTTT 60.668 57.895 16.47 0.00 0.00 3.60
464 465 3.429141 GTCGAGTCCAGGCGTCGA 61.429 66.667 8.52 8.52 40.29 4.20
499 500 2.039299 AGGAGAGGCTGCTCTGCT 59.961 61.111 14.09 14.09 45.30 4.24
500 501 2.500646 GAGGAGAGGCTGCTCTGC 59.499 66.667 8.46 10.85 43.91 4.26
501 502 2.433994 GGGAGGAGAGGCTGCTCTG 61.434 68.421 14.21 0.00 45.99 3.35
502 503 2.042025 GGGAGGAGAGGCTGCTCT 60.042 66.667 14.21 0.13 45.99 4.09
503 504 3.535962 CGGGAGGAGAGGCTGCTC 61.536 72.222 7.34 7.34 46.01 4.26
505 506 3.844090 GTCGGGAGGAGAGGCTGC 61.844 72.222 0.00 0.00 0.00 5.25
507 508 4.824515 CCGTCGGGAGGAGAGGCT 62.825 72.222 2.34 0.00 34.06 4.58
510 511 3.522731 CTGCCGTCGGGAGGAGAG 61.523 72.222 24.04 0.00 37.51 3.20
515 516 2.183555 GTTACCTGCCGTCGGGAG 59.816 66.667 24.71 24.71 41.45 4.30
516 517 3.384532 GGTTACCTGCCGTCGGGA 61.385 66.667 14.38 9.85 41.45 5.14
517 518 4.462280 GGGTTACCTGCCGTCGGG 62.462 72.222 14.38 0.00 44.58 5.14
518 519 4.462280 GGGGTTACCTGCCGTCGG 62.462 72.222 6.99 6.99 36.80 4.79
519 520 3.242897 TTGGGGTTACCTGCCGTCG 62.243 63.158 0.00 0.00 41.11 5.12
521 522 2.433004 GTTGGGGTTACCTGCCGT 59.567 61.111 0.00 0.00 41.11 5.68
522 523 2.360726 GGTTGGGGTTACCTGCCG 60.361 66.667 0.00 0.00 41.11 5.69
526 527 2.544745 GCTGGGGTTGGGGTTACCT 61.545 63.158 0.00 0.00 41.11 3.08
528 529 1.304134 CTGCTGGGGTTGGGGTTAC 60.304 63.158 0.00 0.00 0.00 2.50
530 531 4.621087 GCTGCTGGGGTTGGGGTT 62.621 66.667 0.00 0.00 0.00 4.11
535 536 2.045536 GAGAGGCTGCTGGGGTTG 60.046 66.667 0.00 0.00 0.00 3.77
536 537 3.334054 GGAGAGGCTGCTGGGGTT 61.334 66.667 0.00 0.00 0.00 4.11
537 538 4.345286 AGGAGAGGCTGCTGGGGT 62.345 66.667 0.00 0.00 29.14 4.95
539 540 2.296365 TTGAGGAGAGGCTGCTGGG 61.296 63.158 0.00 0.00 30.82 4.45
540 541 1.078567 GTTGAGGAGAGGCTGCTGG 60.079 63.158 0.00 0.00 30.82 4.85
542 543 2.297129 GGGTTGAGGAGAGGCTGCT 61.297 63.158 0.00 0.00 34.11 4.24
543 544 2.270527 GGGTTGAGGAGAGGCTGC 59.729 66.667 0.00 0.00 0.00 5.25
544 545 1.204113 AAGGGGTTGAGGAGAGGCTG 61.204 60.000 0.00 0.00 0.00 4.85
545 546 0.912006 GAAGGGGTTGAGGAGAGGCT 60.912 60.000 0.00 0.00 0.00 4.58
546 547 1.201429 TGAAGGGGTTGAGGAGAGGC 61.201 60.000 0.00 0.00 0.00 4.70
547 548 1.488393 GATGAAGGGGTTGAGGAGAGG 59.512 57.143 0.00 0.00 0.00 3.69
548 549 2.433970 GAGATGAAGGGGTTGAGGAGAG 59.566 54.545 0.00 0.00 0.00 3.20
549 550 2.472029 GAGATGAAGGGGTTGAGGAGA 58.528 52.381 0.00 0.00 0.00 3.71
550 551 1.488393 GGAGATGAAGGGGTTGAGGAG 59.512 57.143 0.00 0.00 0.00 3.69
551 552 1.584724 GGAGATGAAGGGGTTGAGGA 58.415 55.000 0.00 0.00 0.00 3.71
552 553 0.179000 CGGAGATGAAGGGGTTGAGG 59.821 60.000 0.00 0.00 0.00 3.86
553 554 0.905357 ACGGAGATGAAGGGGTTGAG 59.095 55.000 0.00 0.00 0.00 3.02
554 555 0.613260 CACGGAGATGAAGGGGTTGA 59.387 55.000 0.00 0.00 0.00 3.18
555 556 0.613260 TCACGGAGATGAAGGGGTTG 59.387 55.000 0.00 0.00 0.00 3.77
556 557 0.613777 GTCACGGAGATGAAGGGGTT 59.386 55.000 0.00 0.00 0.00 4.11
557 558 0.252284 AGTCACGGAGATGAAGGGGT 60.252 55.000 0.00 0.00 0.00 4.95
558 559 0.905357 AAGTCACGGAGATGAAGGGG 59.095 55.000 0.00 0.00 0.00 4.79
559 560 2.009042 GCAAGTCACGGAGATGAAGGG 61.009 57.143 0.00 0.00 0.00 3.95
560 561 1.066573 AGCAAGTCACGGAGATGAAGG 60.067 52.381 0.00 0.00 0.00 3.46
561 562 2.376808 AGCAAGTCACGGAGATGAAG 57.623 50.000 0.00 0.00 0.00 3.02
562 563 2.094182 GGTAGCAAGTCACGGAGATGAA 60.094 50.000 0.00 0.00 0.00 2.57
563 564 1.476891 GGTAGCAAGTCACGGAGATGA 59.523 52.381 0.00 0.00 0.00 2.92
564 565 1.471676 GGGTAGCAAGTCACGGAGATG 60.472 57.143 0.00 0.00 0.00 2.90
565 566 0.824759 GGGTAGCAAGTCACGGAGAT 59.175 55.000 0.00 0.00 0.00 2.75
566 567 1.255667 GGGGTAGCAAGTCACGGAGA 61.256 60.000 0.00 0.00 0.00 3.71
567 568 1.218316 GGGGTAGCAAGTCACGGAG 59.782 63.158 0.00 0.00 0.00 4.63
568 569 0.834687 AAGGGGTAGCAAGTCACGGA 60.835 55.000 0.00 0.00 0.00 4.69
569 570 0.673644 CAAGGGGTAGCAAGTCACGG 60.674 60.000 0.00 0.00 0.00 4.94
570 571 1.298859 GCAAGGGGTAGCAAGTCACG 61.299 60.000 0.00 0.00 0.00 4.35
571 572 0.036875 AGCAAGGGGTAGCAAGTCAC 59.963 55.000 0.00 0.00 0.00 3.67
572 573 0.036732 CAGCAAGGGGTAGCAAGTCA 59.963 55.000 0.00 0.00 0.00 3.41
573 574 0.036875 ACAGCAAGGGGTAGCAAGTC 59.963 55.000 0.00 0.00 0.00 3.01
574 575 0.250901 CACAGCAAGGGGTAGCAAGT 60.251 55.000 0.00 0.00 0.00 3.16
575 576 1.589716 GCACAGCAAGGGGTAGCAAG 61.590 60.000 0.00 0.00 0.00 4.01
576 577 1.603455 GCACAGCAAGGGGTAGCAA 60.603 57.895 0.00 0.00 0.00 3.91
577 578 2.034066 GCACAGCAAGGGGTAGCA 59.966 61.111 0.00 0.00 0.00 3.49
578 579 2.042831 CAGCACAGCAAGGGGTAGC 61.043 63.158 0.00 0.00 0.00 3.58
579 580 1.377725 CCAGCACAGCAAGGGGTAG 60.378 63.158 0.00 0.00 0.00 3.18
580 581 2.756400 CCAGCACAGCAAGGGGTA 59.244 61.111 0.00 0.00 0.00 3.69
581 582 4.290622 CCCAGCACAGCAAGGGGT 62.291 66.667 10.57 0.00 40.73 4.95
614 615 9.646522 ACAACCAGAAAGGAAAAGCATATATAT 57.353 29.630 0.00 0.00 41.22 0.86
730 767 8.931775 GTTACACACAAGGAAAACTTTGATTTT 58.068 29.630 0.00 0.00 37.29 1.82
848 900 5.524646 ACAGCACAATTTCCAAAAGAACATG 59.475 36.000 0.00 0.00 32.95 3.21
908 961 5.063564 GCAGATAAACCGGTGAAGAAACTAG 59.936 44.000 8.52 0.00 0.00 2.57
970 1024 6.151144 CCACTGTAAAGCTTGGCTACTTATTT 59.849 38.462 0.00 0.00 38.25 1.40
1098 1155 0.464036 TAGCATAGCCCTTGTGGACG 59.536 55.000 0.00 0.00 35.39 4.79
1305 1363 7.937649 TGGAGATCTTTGCAATGATATTTCTG 58.062 34.615 23.44 0.00 0.00 3.02
1365 1427 2.966309 GCACTTGCACCGGTACAGC 61.966 63.158 6.87 7.80 41.59 4.40
1484 1546 2.298729 CGGGTGTTTGGGTCAATTGATT 59.701 45.455 12.12 0.00 0.00 2.57
1509 1571 6.455360 TTTGGATAGCCACAAATCAAGATC 57.545 37.500 0.00 0.00 45.94 2.75
1551 1614 4.042311 TCAGCCCTTGTAACCTTGTTCATA 59.958 41.667 0.00 0.00 0.00 2.15
1596 1659 5.906073 ACAGAAAGGGATTTTGTTGTGAAG 58.094 37.500 0.00 0.00 32.80 3.02
1622 1687 5.096954 CAGATGCTTGTAATCTGCATGAG 57.903 43.478 4.36 0.00 45.90 2.90
1639 1704 4.025396 GTCAATCACTTGGTATCGCAGATG 60.025 45.833 1.97 0.00 35.37 2.90
1893 1958 4.285517 AGCTTCATGTCCTCTTCAGAAAGA 59.714 41.667 0.00 0.00 39.22 2.52
2147 2212 1.276421 TGCAAGTAGGCCTGTCTCTTC 59.724 52.381 17.99 7.13 0.00 2.87
2148 2213 1.352083 TGCAAGTAGGCCTGTCTCTT 58.648 50.000 17.99 11.63 0.00 2.85
2154 2219 1.065199 TGAGGAATGCAAGTAGGCCTG 60.065 52.381 17.99 0.00 0.00 4.85
2238 2303 1.495878 CGCCTCCATTCTCATTCTCG 58.504 55.000 0.00 0.00 0.00 4.04
2256 2321 0.108186 TGGCAGAATAGACACCAGCG 60.108 55.000 0.00 0.00 0.00 5.18
2271 2336 2.574006 AATGCTTCTTGAGACTGGCA 57.426 45.000 0.00 0.00 0.00 4.92
2298 2363 1.918262 TCCTTCCACTCATCATTGGCT 59.082 47.619 0.00 0.00 32.37 4.75
2367 2432 4.040952 CACCTTTCCAAGATATCCGGATCT 59.959 45.833 23.08 12.00 37.81 2.75
2502 2567 6.679884 GCATTGCCTTCTTCTTCCTAATCTTG 60.680 42.308 0.00 0.00 0.00 3.02
2511 2576 3.066481 GGATGAGCATTGCCTTCTTCTTC 59.934 47.826 4.70 3.95 0.00 2.87
2512 2577 3.022406 GGATGAGCATTGCCTTCTTCTT 58.978 45.455 4.70 0.00 0.00 2.52
2513 2578 2.025605 TGGATGAGCATTGCCTTCTTCT 60.026 45.455 4.70 0.00 0.00 2.85
2562 2630 0.178068 GAACAATAGGCCGGCTCTCA 59.822 55.000 28.56 9.42 0.00 3.27
2663 2731 1.300620 CGAAGTCGGTTCACAGCCA 60.301 57.895 0.00 0.00 34.44 4.75
2904 2978 1.001764 TCCACGTCGAGCCTCCTTA 60.002 57.895 0.00 0.00 0.00 2.69
2934 3008 1.203001 GGTTTCAAGGTGGGGATGACA 60.203 52.381 0.00 0.00 0.00 3.58
2955 3029 4.331108 GTTTCCCAGAGAAGAGATGCTTT 58.669 43.478 0.00 0.00 36.83 3.51
3116 3196 5.473504 TCCCTATGAAAAAGAAACAGCAGTC 59.526 40.000 0.00 0.00 0.00 3.51
3120 3200 6.039829 CCCTATCCCTATGAAAAAGAAACAGC 59.960 42.308 0.00 0.00 0.00 4.40
3146 3226 7.080353 TCAGCATGATGTCAAGATTTAACAG 57.920 36.000 11.32 0.00 42.56 3.16
3163 3243 7.252708 TGCATCTAGTTTAAACAATCAGCATG 58.747 34.615 20.06 11.78 37.54 4.06
3218 3299 7.446769 TCAGCTTACTACAGAACAACCAATTA 58.553 34.615 0.00 0.00 0.00 1.40
3248 3333 6.095021 TGAGAGTGCAGTACGATATGTAAACT 59.905 38.462 0.00 0.00 34.07 2.66
3251 3336 6.445357 TTGAGAGTGCAGTACGATATGTAA 57.555 37.500 0.00 0.00 34.07 2.41
3260 3347 5.886960 AATCCAATTTGAGAGTGCAGTAC 57.113 39.130 0.00 0.00 0.00 2.73
3338 3426 1.466167 CTACAGTGCTTGCATCACCAC 59.534 52.381 13.87 7.09 35.14 4.16
3421 3515 3.926058 TTGAAGGGTTAGGCTGATACC 57.074 47.619 0.00 1.72 0.00 2.73
3448 3542 4.722526 TCAACAACCCTATCCATATGGG 57.277 45.455 21.78 7.72 46.07 4.00
3459 3553 4.216257 CACGATTTCAAGATCAACAACCCT 59.784 41.667 0.00 0.00 0.00 4.34
3460 3554 4.475944 CACGATTTCAAGATCAACAACCC 58.524 43.478 0.00 0.00 0.00 4.11
3461 3555 3.914364 GCACGATTTCAAGATCAACAACC 59.086 43.478 0.00 0.00 0.00 3.77
3466 3560 5.885230 AATCAGCACGATTTCAAGATCAA 57.115 34.783 0.00 0.00 41.83 2.57
3480 3574 7.011189 GTGCATTCAATTTACAAAATCAGCAC 58.989 34.615 0.00 0.00 39.16 4.40
3505 3599 0.389948 GACTACAAGGTCGGTGCTGG 60.390 60.000 0.00 0.00 0.00 4.85
3506 3600 0.317160 TGACTACAAGGTCGGTGCTG 59.683 55.000 0.00 0.00 38.91 4.41
3507 3601 1.045407 TTGACTACAAGGTCGGTGCT 58.955 50.000 0.00 0.00 38.91 4.40
3509 3603 2.742053 CCAATTGACTACAAGGTCGGTG 59.258 50.000 7.12 0.00 39.46 4.94
3510 3604 2.370849 ACCAATTGACTACAAGGTCGGT 59.629 45.455 7.12 0.00 39.46 4.69
3511 3605 3.053831 ACCAATTGACTACAAGGTCGG 57.946 47.619 7.12 0.00 39.46 4.79
3512 3606 3.813166 ACAACCAATTGACTACAAGGTCG 59.187 43.478 7.12 0.00 39.46 4.79
3513 3607 4.556699 GCACAACCAATTGACTACAAGGTC 60.557 45.833 7.12 0.00 39.46 3.85
3517 3611 3.951037 ACAGCACAACCAATTGACTACAA 59.049 39.130 7.12 0.00 39.30 2.41
3518 3612 3.550820 ACAGCACAACCAATTGACTACA 58.449 40.909 7.12 0.00 39.30 2.74
3519 3613 4.755123 ACTACAGCACAACCAATTGACTAC 59.245 41.667 7.12 0.00 39.30 2.73
3569 3675 3.829886 TTCACTGATCGAATTTGGTGC 57.170 42.857 0.00 0.00 0.00 5.01
3612 3719 4.965062 CAACGGTGCTTTCGTGTATTTAT 58.035 39.130 0.00 0.00 40.96 1.40
3613 3720 4.392619 CAACGGTGCTTTCGTGTATTTA 57.607 40.909 0.00 0.00 40.96 1.40
3614 3721 3.262135 CAACGGTGCTTTCGTGTATTT 57.738 42.857 0.00 0.00 40.96 1.40
3638 3745 1.742831 GCATCACCAATCGGCAGTTTA 59.257 47.619 0.00 0.00 34.57 2.01
3645 3752 0.527113 TTGCTTGCATCACCAATCGG 59.473 50.000 0.00 0.00 38.77 4.18
3661 3768 1.098050 CCCTTCCATACAGTGCTTGC 58.902 55.000 0.00 0.00 0.00 4.01
3662 3769 1.098050 GCCCTTCCATACAGTGCTTG 58.902 55.000 0.00 0.00 0.00 4.01
3663 3770 0.995024 AGCCCTTCCATACAGTGCTT 59.005 50.000 0.00 0.00 0.00 3.91
3664 3771 0.995024 AAGCCCTTCCATACAGTGCT 59.005 50.000 0.00 0.00 0.00 4.40
3672 3779 1.002069 TGGATCACAAGCCCTTCCAT 58.998 50.000 0.00 0.00 31.67 3.41
3716 3829 3.445008 TGTACTTCCTGCAGGAGAGAAT 58.555 45.455 33.32 22.81 46.36 2.40
3747 3864 8.019669 GTGATAGATATGCAGCACCAAAAATAG 58.980 37.037 0.00 0.00 0.00 1.73
3762 3879 3.511540 TCAAGCCTCCCGTGATAGATATG 59.488 47.826 0.00 0.00 0.00 1.78
3763 3880 3.779444 TCAAGCCTCCCGTGATAGATAT 58.221 45.455 0.00 0.00 0.00 1.63
3771 3888 0.821711 TGGTTTTCAAGCCTCCCGTG 60.822 55.000 0.00 0.00 0.00 4.94
3772 3889 0.106419 TTGGTTTTCAAGCCTCCCGT 60.106 50.000 0.00 0.00 0.00 5.28
3773 3890 0.598065 CTTGGTTTTCAAGCCTCCCG 59.402 55.000 0.00 0.00 45.24 5.14
3792 3909 2.438075 CCTCCTGCCAGCTTGAGC 60.438 66.667 0.00 0.00 42.49 4.26
3793 3910 1.221293 CTCCTCCTGCCAGCTTGAG 59.779 63.158 0.00 0.00 0.00 3.02
3794 3911 0.619832 ATCTCCTCCTGCCAGCTTGA 60.620 55.000 0.00 0.00 0.00 3.02
3796 3913 1.127343 GTATCTCCTCCTGCCAGCTT 58.873 55.000 0.00 0.00 0.00 3.74
3797 3914 0.264359 AGTATCTCCTCCTGCCAGCT 59.736 55.000 0.00 0.00 0.00 4.24
3800 3917 3.722627 ACTAGTAGTATCTCCTCCTGCCA 59.277 47.826 0.00 0.00 0.00 4.92
3801 3918 4.376225 ACTAGTAGTATCTCCTCCTGCC 57.624 50.000 0.00 0.00 0.00 4.85
3842 3959 5.299279 ACAAATGAGGACAAAGTGTAACAGG 59.701 40.000 0.00 0.00 41.43 4.00
3850 3967 9.520515 ACATAATCTAACAAATGAGGACAAAGT 57.479 29.630 0.00 0.00 0.00 2.66
3852 3969 8.664798 CGACATAATCTAACAAATGAGGACAAA 58.335 33.333 0.00 0.00 0.00 2.83
3876 3993 2.592194 GTACACTTCAGCAACGATCGA 58.408 47.619 24.34 0.00 0.00 3.59
3887 4004 4.640789 ACCAAAATTTGCGTACACTTCA 57.359 36.364 0.00 0.00 0.00 3.02
3896 4013 5.465056 AGTGTGGAATAAACCAAAATTTGCG 59.535 36.000 0.00 0.00 41.87 4.85
3898 4015 8.121708 CACAAGTGTGGAATAAACCAAAATTTG 58.878 33.333 3.39 0.00 41.87 2.32
3899 4016 8.207521 CACAAGTGTGGAATAAACCAAAATTT 57.792 30.769 3.39 0.00 41.87 1.82
3916 4033 1.204146 AGTCCACTCCACACAAGTGT 58.796 50.000 0.00 0.00 44.39 3.55
3918 4035 4.497291 TTTAAGTCCACTCCACACAAGT 57.503 40.909 0.00 0.00 0.00 3.16
3921 4038 5.654650 ACAAAATTTAAGTCCACTCCACACA 59.345 36.000 0.00 0.00 0.00 3.72
3931 4048 7.708752 TGACACCATCAAACAAAATTTAAGTCC 59.291 33.333 0.00 0.00 33.02 3.85
3952 4069 0.238289 CCGTTCCAGCACATTGACAC 59.762 55.000 0.00 0.00 0.00 3.67
3956 4073 1.875963 GACCCGTTCCAGCACATTG 59.124 57.895 0.00 0.00 0.00 2.82
3957 4074 1.671054 CGACCCGTTCCAGCACATT 60.671 57.895 0.00 0.00 0.00 2.71
3958 4075 2.047274 CGACCCGTTCCAGCACAT 60.047 61.111 0.00 0.00 0.00 3.21
3959 4076 4.980805 GCGACCCGTTCCAGCACA 62.981 66.667 0.00 0.00 0.00 4.57
3960 4077 4.681978 AGCGACCCGTTCCAGCAC 62.682 66.667 0.00 0.00 0.00 4.40
3961 4078 4.680237 CAGCGACCCGTTCCAGCA 62.680 66.667 0.00 0.00 0.00 4.41
3963 4080 3.530910 AACCAGCGACCCGTTCCAG 62.531 63.158 0.00 0.00 0.00 3.86
3964 4081 3.524648 GAACCAGCGACCCGTTCCA 62.525 63.158 0.00 0.00 31.66 3.53
3965 4082 2.726822 AAGAACCAGCGACCCGTTCC 62.727 60.000 0.00 0.00 37.24 3.62
3966 4083 0.037975 TAAGAACCAGCGACCCGTTC 60.038 55.000 0.00 0.00 36.88 3.95
3967 4084 0.320160 GTAAGAACCAGCGACCCGTT 60.320 55.000 0.00 0.00 0.00 4.44
3968 4085 1.183676 AGTAAGAACCAGCGACCCGT 61.184 55.000 0.00 0.00 0.00 5.28
3969 4086 0.037605 AAGTAAGAACCAGCGACCCG 60.038 55.000 0.00 0.00 0.00 5.28
3970 4087 2.180432 AAAGTAAGAACCAGCGACCC 57.820 50.000 0.00 0.00 0.00 4.46
3971 4088 6.035758 CAGTATAAAAGTAAGAACCAGCGACC 59.964 42.308 0.00 0.00 0.00 4.79
3972 4089 6.810182 TCAGTATAAAAGTAAGAACCAGCGAC 59.190 38.462 0.00 0.00 0.00 5.19
3973 4090 6.927416 TCAGTATAAAAGTAAGAACCAGCGA 58.073 36.000 0.00 0.00 0.00 4.93
3974 4091 7.331193 ACTTCAGTATAAAAGTAAGAACCAGCG 59.669 37.037 0.00 0.00 34.05 5.18
3975 4092 8.443937 CACTTCAGTATAAAAGTAAGAACCAGC 58.556 37.037 0.00 0.00 34.05 4.85
3976 4093 9.490379 ACACTTCAGTATAAAAGTAAGAACCAG 57.510 33.333 0.00 0.00 34.05 4.00
3977 4094 9.268268 CACACTTCAGTATAAAAGTAAGAACCA 57.732 33.333 0.00 0.00 34.05 3.67
3978 4095 9.269453 ACACACTTCAGTATAAAAGTAAGAACC 57.731 33.333 0.00 0.00 34.05 3.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.