Multiple sequence alignment - TraesCS5A01G027900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G027900 chr5A 100.000 2840 0 0 1 2840 23908834 23905995 0.000000e+00 5245.0
1 TraesCS5A01G027900 chr5A 90.959 1283 70 27 862 2118 24197937 24199199 0.000000e+00 1685.0
2 TraesCS5A01G027900 chr5A 91.274 573 41 3 1275 1841 649784934 649784365 0.000000e+00 773.0
3 TraesCS5A01G027900 chr5A 87.088 364 26 13 901 1251 649785273 649784918 2.650000e-105 392.0
4 TraesCS5A01G027900 chr5A 94.141 256 7 4 611 864 24197647 24197896 1.600000e-102 383.0
5 TraesCS5A01G027900 chr5A 84.577 201 19 7 654 851 649785570 649785379 3.740000e-44 189.0
6 TraesCS5A01G027900 chr5A 87.313 134 11 5 2000 2132 649784205 649784077 6.340000e-32 148.0
7 TraesCS5A01G027900 chr5D 89.428 1381 68 35 862 2229 35652098 35653413 0.000000e+00 1670.0
8 TraesCS5A01G027900 chr5D 91.638 574 42 3 1271 1841 521404560 521403990 0.000000e+00 789.0
9 TraesCS5A01G027900 chr5D 87.912 364 19 14 901 1251 521404891 521404540 3.410000e-109 405.0
10 TraesCS5A01G027900 chr5D 78.780 410 55 20 469 864 521405363 521404972 2.190000e-61 246.0
11 TraesCS5A01G027900 chr5D 85.981 214 18 9 655 864 35651858 35652063 4.760000e-53 219.0
12 TraesCS5A01G027900 chr5D 90.805 87 8 0 2230 2316 35658427 35658513 1.790000e-22 117.0
13 TraesCS5A01G027900 chr5D 97.297 37 1 0 2000 2036 521403839 521403803 2.360000e-06 63.9
14 TraesCS5A01G027900 chrUn 89.283 1157 82 23 862 1997 318996206 318997341 0.000000e+00 1411.0
15 TraesCS5A01G027900 chrUn 89.283 1157 82 23 862 1997 397775264 397776399 0.000000e+00 1411.0
16 TraesCS5A01G027900 chrUn 88.984 1053 71 23 862 1898 271014069 271015092 0.000000e+00 1260.0
17 TraesCS5A01G027900 chrUn 88.984 1053 71 23 862 1898 280884756 280885779 0.000000e+00 1260.0
18 TraesCS5A01G027900 chrUn 91.968 249 18 2 1 248 210693634 210693881 5.820000e-92 348.0
19 TraesCS5A01G027900 chrUn 85.398 226 13 12 647 864 318995958 318996171 1.710000e-52 217.0
20 TraesCS5A01G027900 chrUn 85.024 207 13 10 2000 2199 318997386 318997581 8.030000e-46 195.0
21 TraesCS5A01G027900 chrUn 85.024 207 13 10 2000 2199 397776444 397776639 8.030000e-46 195.0
22 TraesCS5A01G027900 chrUn 91.964 112 4 2 2000 2107 271015216 271015326 4.900000e-33 152.0
23 TraesCS5A01G027900 chrUn 91.964 112 4 2 2000 2107 280885903 280886013 4.900000e-33 152.0
24 TraesCS5A01G027900 chr5B 86.806 955 58 37 901 1841 657722901 657722001 0.000000e+00 1003.0
25 TraesCS5A01G027900 chr6B 96.030 529 13 2 2312 2840 317216551 317216031 0.000000e+00 854.0
26 TraesCS5A01G027900 chr6B 91.837 245 20 0 1 245 277620349 277620593 2.710000e-90 342.0
27 TraesCS5A01G027900 chr4B 95.472 530 16 2 2311 2840 604142019 604142540 0.000000e+00 839.0
28 TraesCS5A01G027900 chr4B 94.717 530 17 2 2311 2840 85984536 85985054 0.000000e+00 813.0
29 TraesCS5A01G027900 chr3A 94.796 538 19 5 2304 2840 684742968 684743497 0.000000e+00 830.0
30 TraesCS5A01G027900 chr3A 94.495 545 19 4 2296 2840 733281673 733281140 0.000000e+00 830.0
31 TraesCS5A01G027900 chr3A 94.757 534 20 2 2307 2840 562094945 562095470 0.000000e+00 824.0
32 TraesCS5A01G027900 chr3A 94.896 529 15 3 2312 2840 459624204 459623688 0.000000e+00 817.0
33 TraesCS5A01G027900 chr7A 95.094 530 18 2 2312 2840 609345985 609346507 0.000000e+00 828.0
34 TraesCS5A01G027900 chr7A 94.329 529 22 2 2312 2840 677973718 677974238 0.000000e+00 804.0
35 TraesCS5A01G027900 chr2A 95.104 531 15 3 2312 2840 516416767 516416246 0.000000e+00 826.0
36 TraesCS5A01G027900 chr2A 93.967 547 22 5 2297 2840 765852461 765851923 0.000000e+00 817.0
37 TraesCS5A01G027900 chr2A 94.528 530 20 3 2312 2840 48257125 48257646 0.000000e+00 809.0
38 TraesCS5A01G027900 chr2A 92.593 243 16 1 1 243 375317131 375317371 5.820000e-92 348.0
39 TraesCS5A01G027900 chr1A 94.549 532 21 2 2309 2840 446242818 446243341 0.000000e+00 815.0
40 TraesCS5A01G027900 chr1A 93.657 536 22 6 2305 2840 481272101 481272624 0.000000e+00 791.0
41 TraesCS5A01G027900 chr1A 93.585 530 19 4 2312 2840 82715972 82715457 0.000000e+00 776.0
42 TraesCS5A01G027900 chr6A 93.962 530 22 4 2312 2840 224100390 224099870 0.000000e+00 793.0
43 TraesCS5A01G027900 chr6A 94.672 244 12 1 1 243 430510863 430511106 7.430000e-101 377.0
44 TraesCS5A01G027900 chr6A 91.837 245 20 0 1 245 425250700 425250944 2.710000e-90 342.0
45 TraesCS5A01G027900 chr2B 92.683 246 17 1 1 245 466529615 466529370 1.250000e-93 353.0
46 TraesCS5A01G027900 chr2B 92.213 244 19 0 1 244 524174338 524174095 2.090000e-91 346.0
47 TraesCS5A01G027900 chr1B 91.633 251 21 0 1 251 314731540 314731790 5.820000e-92 348.0
48 TraesCS5A01G027900 chr3B 91.600 250 20 1 1 250 824370106 824369858 7.530000e-91 344.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G027900 chr5A 23905995 23908834 2839 True 5245.000000 5245 100.000000 1 2840 1 chr5A.!!$R1 2839
1 TraesCS5A01G027900 chr5A 24197647 24199199 1552 False 1034.000000 1685 92.550000 611 2118 2 chr5A.!!$F1 1507
2 TraesCS5A01G027900 chr5A 649784077 649785570 1493 True 375.500000 773 87.563000 654 2132 4 chr5A.!!$R2 1478
3 TraesCS5A01G027900 chr5D 35651858 35653413 1555 False 944.500000 1670 87.704500 655 2229 2 chr5D.!!$F2 1574
4 TraesCS5A01G027900 chr5D 521403803 521405363 1560 True 375.975000 789 88.906750 469 2036 4 chr5D.!!$R1 1567
5 TraesCS5A01G027900 chrUn 397775264 397776639 1375 False 803.000000 1411 87.153500 862 2199 2 chrUn.!!$F5 1337
6 TraesCS5A01G027900 chrUn 271014069 271015326 1257 False 706.000000 1260 90.474000 862 2107 2 chrUn.!!$F2 1245
7 TraesCS5A01G027900 chrUn 280884756 280886013 1257 False 706.000000 1260 90.474000 862 2107 2 chrUn.!!$F3 1245
8 TraesCS5A01G027900 chrUn 318995958 318997581 1623 False 607.666667 1411 86.568333 647 2199 3 chrUn.!!$F4 1552
9 TraesCS5A01G027900 chr5B 657722001 657722901 900 True 1003.000000 1003 86.806000 901 1841 1 chr5B.!!$R1 940
10 TraesCS5A01G027900 chr6B 317216031 317216551 520 True 854.000000 854 96.030000 2312 2840 1 chr6B.!!$R1 528
11 TraesCS5A01G027900 chr4B 604142019 604142540 521 False 839.000000 839 95.472000 2311 2840 1 chr4B.!!$F2 529
12 TraesCS5A01G027900 chr4B 85984536 85985054 518 False 813.000000 813 94.717000 2311 2840 1 chr4B.!!$F1 529
13 TraesCS5A01G027900 chr3A 684742968 684743497 529 False 830.000000 830 94.796000 2304 2840 1 chr3A.!!$F2 536
14 TraesCS5A01G027900 chr3A 733281140 733281673 533 True 830.000000 830 94.495000 2296 2840 1 chr3A.!!$R2 544
15 TraesCS5A01G027900 chr3A 562094945 562095470 525 False 824.000000 824 94.757000 2307 2840 1 chr3A.!!$F1 533
16 TraesCS5A01G027900 chr3A 459623688 459624204 516 True 817.000000 817 94.896000 2312 2840 1 chr3A.!!$R1 528
17 TraesCS5A01G027900 chr7A 609345985 609346507 522 False 828.000000 828 95.094000 2312 2840 1 chr7A.!!$F1 528
18 TraesCS5A01G027900 chr7A 677973718 677974238 520 False 804.000000 804 94.329000 2312 2840 1 chr7A.!!$F2 528
19 TraesCS5A01G027900 chr2A 516416246 516416767 521 True 826.000000 826 95.104000 2312 2840 1 chr2A.!!$R1 528
20 TraesCS5A01G027900 chr2A 765851923 765852461 538 True 817.000000 817 93.967000 2297 2840 1 chr2A.!!$R2 543
21 TraesCS5A01G027900 chr2A 48257125 48257646 521 False 809.000000 809 94.528000 2312 2840 1 chr2A.!!$F1 528
22 TraesCS5A01G027900 chr1A 446242818 446243341 523 False 815.000000 815 94.549000 2309 2840 1 chr1A.!!$F1 531
23 TraesCS5A01G027900 chr1A 481272101 481272624 523 False 791.000000 791 93.657000 2305 2840 1 chr1A.!!$F2 535
24 TraesCS5A01G027900 chr1A 82715457 82715972 515 True 776.000000 776 93.585000 2312 2840 1 chr1A.!!$R1 528
25 TraesCS5A01G027900 chr6A 224099870 224100390 520 True 793.000000 793 93.962000 2312 2840 1 chr6A.!!$R1 528

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
34 35 0.031716 TGATGAGGTGGAGGGGAGAG 60.032 60.0 0.00 0.00 0.0 3.20 F
294 295 0.036388 CCGCTAGAAGGACTTTGGCA 60.036 55.0 0.00 0.00 0.0 4.92 F
335 336 0.107410 CACATTACTTGGGCCGGCTA 60.107 55.0 28.56 13.55 0.0 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1486 1646 1.069204 CATCTTCATCCCATCGTCGGT 59.931 52.381 0.0 0.0 0.00 4.69 R
1632 1810 1.153489 CATGTCGCTCACCTCCAGG 60.153 63.158 0.0 0.0 42.17 4.45 R
1887 2070 1.349688 TCTGTAAACCTGATGGGCGTT 59.650 47.619 0.0 0.0 39.10 4.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.103365 GCCACGTAGGATAGATGATGAG 57.897 50.000 8.04 0.00 41.22 2.90
22 23 3.119316 GCCACGTAGGATAGATGATGAGG 60.119 52.174 8.04 0.00 41.22 3.86
23 24 4.082845 CCACGTAGGATAGATGATGAGGT 58.917 47.826 0.00 0.00 41.22 3.85
24 25 4.082517 CCACGTAGGATAGATGATGAGGTG 60.083 50.000 0.00 0.00 41.22 4.00
25 26 4.082517 CACGTAGGATAGATGATGAGGTGG 60.083 50.000 0.00 0.00 0.00 4.61
26 27 4.202577 ACGTAGGATAGATGATGAGGTGGA 60.203 45.833 0.00 0.00 0.00 4.02
27 28 4.397730 CGTAGGATAGATGATGAGGTGGAG 59.602 50.000 0.00 0.00 0.00 3.86
28 29 3.788933 AGGATAGATGATGAGGTGGAGG 58.211 50.000 0.00 0.00 0.00 4.30
29 30 2.836981 GGATAGATGATGAGGTGGAGGG 59.163 54.545 0.00 0.00 0.00 4.30
30 31 2.405618 TAGATGATGAGGTGGAGGGG 57.594 55.000 0.00 0.00 0.00 4.79
31 32 0.644380 AGATGATGAGGTGGAGGGGA 59.356 55.000 0.00 0.00 0.00 4.81
32 33 1.055040 GATGATGAGGTGGAGGGGAG 58.945 60.000 0.00 0.00 0.00 4.30
33 34 0.644380 ATGATGAGGTGGAGGGGAGA 59.356 55.000 0.00 0.00 0.00 3.71
34 35 0.031716 TGATGAGGTGGAGGGGAGAG 60.032 60.000 0.00 0.00 0.00 3.20
35 36 0.263172 GATGAGGTGGAGGGGAGAGA 59.737 60.000 0.00 0.00 0.00 3.10
36 37 0.719015 ATGAGGTGGAGGGGAGAGAA 59.281 55.000 0.00 0.00 0.00 2.87
37 38 0.252284 TGAGGTGGAGGGGAGAGAAC 60.252 60.000 0.00 0.00 0.00 3.01
38 39 0.041982 GAGGTGGAGGGGAGAGAACT 59.958 60.000 0.00 0.00 0.00 3.01
39 40 0.494095 AGGTGGAGGGGAGAGAACTT 59.506 55.000 0.00 0.00 0.00 2.66
40 41 0.906066 GGTGGAGGGGAGAGAACTTC 59.094 60.000 0.00 0.00 0.00 3.01
41 42 1.553651 GGTGGAGGGGAGAGAACTTCT 60.554 57.143 0.00 0.00 39.43 2.85
42 43 2.292323 GGTGGAGGGGAGAGAACTTCTA 60.292 54.545 0.00 0.00 35.87 2.10
43 44 3.442076 GTGGAGGGGAGAGAACTTCTAA 58.558 50.000 0.00 0.00 35.87 2.10
44 45 3.449377 GTGGAGGGGAGAGAACTTCTAAG 59.551 52.174 0.00 0.00 35.87 2.18
45 46 3.336997 TGGAGGGGAGAGAACTTCTAAGA 59.663 47.826 0.00 0.00 35.87 2.10
46 47 4.202792 TGGAGGGGAGAGAACTTCTAAGAA 60.203 45.833 0.00 0.00 35.87 2.52
47 48 4.778427 GGAGGGGAGAGAACTTCTAAGAAA 59.222 45.833 0.00 0.00 35.87 2.52
48 49 5.248705 GGAGGGGAGAGAACTTCTAAGAAAA 59.751 44.000 0.00 0.00 35.87 2.29
49 50 6.367374 AGGGGAGAGAACTTCTAAGAAAAG 57.633 41.667 0.00 0.00 35.87 2.27
50 51 5.249622 AGGGGAGAGAACTTCTAAGAAAAGG 59.750 44.000 0.00 0.00 35.87 3.11
51 52 4.938832 GGGAGAGAACTTCTAAGAAAAGGC 59.061 45.833 0.00 0.00 35.87 4.35
52 53 5.280266 GGGAGAGAACTTCTAAGAAAAGGCT 60.280 44.000 0.00 0.00 35.87 4.58
53 54 6.234920 GGAGAGAACTTCTAAGAAAAGGCTT 58.765 40.000 0.00 0.00 35.87 4.35
54 55 6.148645 GGAGAGAACTTCTAAGAAAAGGCTTG 59.851 42.308 0.00 0.00 35.87 4.01
55 56 6.596621 AGAGAACTTCTAAGAAAAGGCTTGT 58.403 36.000 0.00 0.00 33.23 3.16
56 57 6.708502 AGAGAACTTCTAAGAAAAGGCTTGTC 59.291 38.462 9.51 9.51 33.23 3.18
57 58 6.596621 AGAACTTCTAAGAAAAGGCTTGTCT 58.403 36.000 14.33 14.33 0.00 3.41
58 59 7.057264 AGAACTTCTAAGAAAAGGCTTGTCTT 58.943 34.615 30.04 30.04 35.77 3.01
59 60 7.558081 AGAACTTCTAAGAAAAGGCTTGTCTTT 59.442 33.333 31.76 16.67 38.48 2.52
60 61 7.646548 ACTTCTAAGAAAAGGCTTGTCTTTT 57.353 32.000 31.76 15.78 46.07 2.27
73 74 9.574516 AAGGCTTGTCTTTTCTTATTTAAGAGA 57.425 29.630 0.00 0.00 42.66 3.10
74 75 9.574516 AGGCTTGTCTTTTCTTATTTAAGAGAA 57.425 29.630 0.71 2.51 42.66 2.87
85 86 9.712305 TTCTTATTTAAGAGAAGACAAGAGGTG 57.288 33.333 0.71 0.00 42.66 4.00
86 87 9.090103 TCTTATTTAAGAGAAGACAAGAGGTGA 57.910 33.333 0.00 0.00 37.40 4.02
87 88 9.883142 CTTATTTAAGAGAAGACAAGAGGTGAT 57.117 33.333 0.00 0.00 35.33 3.06
90 91 8.608844 TTTAAGAGAAGACAAGAGGTGATTTC 57.391 34.615 0.00 0.00 0.00 2.17
91 92 6.432403 AAGAGAAGACAAGAGGTGATTTCT 57.568 37.500 0.00 0.00 36.68 2.52
92 93 6.432403 AGAGAAGACAAGAGGTGATTTCTT 57.568 37.500 0.00 0.00 35.25 2.52
93 94 7.546250 AGAGAAGACAAGAGGTGATTTCTTA 57.454 36.000 0.00 0.00 35.25 2.10
94 95 7.610865 AGAGAAGACAAGAGGTGATTTCTTAG 58.389 38.462 0.00 0.00 35.25 2.18
95 96 6.169800 AGAAGACAAGAGGTGATTTCTTAGC 58.830 40.000 0.00 0.00 32.98 3.09
96 97 5.489792 AGACAAGAGGTGATTTCTTAGCA 57.510 39.130 0.00 0.00 33.30 3.49
97 98 6.059787 AGACAAGAGGTGATTTCTTAGCAT 57.940 37.500 0.00 0.00 33.30 3.79
98 99 7.187824 AGACAAGAGGTGATTTCTTAGCATA 57.812 36.000 0.00 0.00 33.30 3.14
99 100 7.624549 AGACAAGAGGTGATTTCTTAGCATAA 58.375 34.615 0.00 0.00 33.30 1.90
100 101 8.270744 AGACAAGAGGTGATTTCTTAGCATAAT 58.729 33.333 0.00 0.00 33.30 1.28
101 102 9.547753 GACAAGAGGTGATTTCTTAGCATAATA 57.452 33.333 0.00 0.00 33.30 0.98
105 106 9.717942 AGAGGTGATTTCTTAGCATAATATGTC 57.282 33.333 1.92 0.00 0.00 3.06
106 107 9.717942 GAGGTGATTTCTTAGCATAATATGTCT 57.282 33.333 1.92 2.85 0.00 3.41
107 108 9.717942 AGGTGATTTCTTAGCATAATATGTCTC 57.282 33.333 1.92 0.00 0.00 3.36
108 109 9.494271 GGTGATTTCTTAGCATAATATGTCTCA 57.506 33.333 1.92 0.00 0.00 3.27
110 111 9.494271 TGATTTCTTAGCATAATATGTCTCACC 57.506 33.333 1.92 0.00 0.00 4.02
111 112 9.494271 GATTTCTTAGCATAATATGTCTCACCA 57.506 33.333 1.92 0.00 0.00 4.17
112 113 8.662781 TTTCTTAGCATAATATGTCTCACCAC 57.337 34.615 1.92 0.00 0.00 4.16
113 114 7.360113 TCTTAGCATAATATGTCTCACCACA 57.640 36.000 1.92 0.00 0.00 4.17
114 115 7.966812 TCTTAGCATAATATGTCTCACCACAT 58.033 34.615 1.92 0.00 40.28 3.21
115 116 8.432013 TCTTAGCATAATATGTCTCACCACATT 58.568 33.333 1.92 0.00 38.07 2.71
116 117 8.978874 TTAGCATAATATGTCTCACCACATTT 57.021 30.769 1.92 0.00 38.07 2.32
117 118 7.886629 AGCATAATATGTCTCACCACATTTT 57.113 32.000 1.92 0.00 38.07 1.82
118 119 8.297470 AGCATAATATGTCTCACCACATTTTT 57.703 30.769 1.92 0.00 38.07 1.94
119 120 9.407380 AGCATAATATGTCTCACCACATTTTTA 57.593 29.630 1.92 0.00 38.07 1.52
127 128 6.922957 TGTCTCACCACATTTTTAAGAATTGC 59.077 34.615 0.00 0.00 0.00 3.56
128 129 7.147976 GTCTCACCACATTTTTAAGAATTGCT 58.852 34.615 0.00 0.00 0.00 3.91
129 130 8.296713 GTCTCACCACATTTTTAAGAATTGCTA 58.703 33.333 0.00 0.00 0.00 3.49
130 131 8.514594 TCTCACCACATTTTTAAGAATTGCTAG 58.485 33.333 0.00 0.00 0.00 3.42
131 132 8.177119 TCACCACATTTTTAAGAATTGCTAGT 57.823 30.769 0.00 0.00 0.00 2.57
132 133 8.637986 TCACCACATTTTTAAGAATTGCTAGTT 58.362 29.630 0.00 0.00 0.00 2.24
133 134 9.906660 CACCACATTTTTAAGAATTGCTAGTTA 57.093 29.630 0.00 0.00 0.00 2.24
159 160 5.816955 AAGATAAGGCTAAGAGATGACCC 57.183 43.478 0.00 0.00 0.00 4.46
160 161 4.820775 AGATAAGGCTAAGAGATGACCCA 58.179 43.478 0.00 0.00 0.00 4.51
161 162 5.410602 AGATAAGGCTAAGAGATGACCCAT 58.589 41.667 0.00 0.00 0.00 4.00
162 163 5.848921 AGATAAGGCTAAGAGATGACCCATT 59.151 40.000 0.00 0.00 0.00 3.16
163 164 3.853355 AGGCTAAGAGATGACCCATTG 57.147 47.619 0.00 0.00 0.00 2.82
164 165 3.118531 AGGCTAAGAGATGACCCATTGT 58.881 45.455 0.00 0.00 0.00 2.71
165 166 4.298626 AGGCTAAGAGATGACCCATTGTA 58.701 43.478 0.00 0.00 0.00 2.41
166 167 4.346418 AGGCTAAGAGATGACCCATTGTAG 59.654 45.833 0.00 0.00 0.00 2.74
167 168 4.345257 GGCTAAGAGATGACCCATTGTAGA 59.655 45.833 0.00 0.00 0.00 2.59
168 169 5.293560 GCTAAGAGATGACCCATTGTAGAC 58.706 45.833 0.00 0.00 0.00 2.59
169 170 5.163405 GCTAAGAGATGACCCATTGTAGACA 60.163 44.000 0.00 0.00 0.00 3.41
170 171 5.762179 AAGAGATGACCCATTGTAGACAA 57.238 39.130 0.00 0.00 40.51 3.18
171 172 5.762179 AGAGATGACCCATTGTAGACAAA 57.238 39.130 0.00 0.00 39.55 2.83
172 173 5.738909 AGAGATGACCCATTGTAGACAAAG 58.261 41.667 0.00 0.00 39.55 2.77
173 174 5.485353 AGAGATGACCCATTGTAGACAAAGA 59.515 40.000 0.00 0.00 39.55 2.52
174 175 6.013379 AGAGATGACCCATTGTAGACAAAGAA 60.013 38.462 0.00 0.00 39.55 2.52
175 176 6.542821 AGATGACCCATTGTAGACAAAGAAA 58.457 36.000 0.00 0.00 39.55 2.52
176 177 7.004086 AGATGACCCATTGTAGACAAAGAAAA 58.996 34.615 0.00 0.00 39.55 2.29
177 178 7.671398 AGATGACCCATTGTAGACAAAGAAAAT 59.329 33.333 0.00 0.00 39.55 1.82
178 179 7.595819 TGACCCATTGTAGACAAAGAAAATT 57.404 32.000 0.00 0.00 39.55 1.82
179 180 8.698973 TGACCCATTGTAGACAAAGAAAATTA 57.301 30.769 0.00 0.00 39.55 1.40
180 181 9.308000 TGACCCATTGTAGACAAAGAAAATTAT 57.692 29.630 0.00 0.00 39.55 1.28
181 182 9.788960 GACCCATTGTAGACAAAGAAAATTATC 57.211 33.333 0.00 0.00 39.55 1.75
182 183 9.308000 ACCCATTGTAGACAAAGAAAATTATCA 57.692 29.630 0.00 0.00 39.55 2.15
239 240 8.383318 ACTATCTTATCAACCATTGTACATGC 57.617 34.615 0.00 0.00 0.00 4.06
240 241 6.639632 ATCTTATCAACCATTGTACATGCC 57.360 37.500 0.00 0.00 0.00 4.40
241 242 4.887071 TCTTATCAACCATTGTACATGCCC 59.113 41.667 0.00 0.00 0.00 5.36
242 243 2.897271 TCAACCATTGTACATGCCCT 57.103 45.000 0.00 0.00 0.00 5.19
243 244 3.168035 TCAACCATTGTACATGCCCTT 57.832 42.857 0.00 0.00 0.00 3.95
244 245 4.308526 TCAACCATTGTACATGCCCTTA 57.691 40.909 0.00 0.00 0.00 2.69
245 246 4.013728 TCAACCATTGTACATGCCCTTAC 58.986 43.478 0.00 0.00 0.00 2.34
246 247 4.016444 CAACCATTGTACATGCCCTTACT 58.984 43.478 0.00 0.00 0.00 2.24
247 248 5.045505 TCAACCATTGTACATGCCCTTACTA 60.046 40.000 0.00 0.00 0.00 1.82
248 249 5.036117 ACCATTGTACATGCCCTTACTAG 57.964 43.478 0.00 0.00 0.00 2.57
249 250 4.473559 ACCATTGTACATGCCCTTACTAGT 59.526 41.667 0.00 0.00 0.00 2.57
250 251 4.816385 CCATTGTACATGCCCTTACTAGTG 59.184 45.833 5.39 0.00 0.00 2.74
251 252 5.396324 CCATTGTACATGCCCTTACTAGTGA 60.396 44.000 5.39 0.00 0.00 3.41
252 253 5.339008 TTGTACATGCCCTTACTAGTGAG 57.661 43.478 5.39 6.67 0.00 3.51
253 254 2.990066 ACATGCCCTTACTAGTGAGC 57.010 50.000 9.13 5.39 0.00 4.26
254 255 1.486726 ACATGCCCTTACTAGTGAGCC 59.513 52.381 9.13 3.36 0.00 4.70
255 256 0.753262 ATGCCCTTACTAGTGAGCCG 59.247 55.000 9.13 2.86 0.00 5.52
256 257 1.327690 TGCCCTTACTAGTGAGCCGG 61.328 60.000 9.13 7.27 0.00 6.13
257 258 1.041447 GCCCTTACTAGTGAGCCGGA 61.041 60.000 5.05 0.00 0.00 5.14
258 259 1.033574 CCCTTACTAGTGAGCCGGAG 58.966 60.000 5.05 0.00 0.00 4.63
259 260 0.386113 CCTTACTAGTGAGCCGGAGC 59.614 60.000 5.05 0.00 40.32 4.70
260 261 0.386113 CTTACTAGTGAGCCGGAGCC 59.614 60.000 5.05 0.00 41.25 4.70
261 262 0.323999 TTACTAGTGAGCCGGAGCCA 60.324 55.000 5.05 0.00 41.25 4.75
262 263 1.035932 TACTAGTGAGCCGGAGCCAC 61.036 60.000 5.05 9.56 41.25 5.01
263 264 2.283604 TAGTGAGCCGGAGCCACA 60.284 61.111 5.05 0.00 41.25 4.17
264 265 1.888436 CTAGTGAGCCGGAGCCACAA 61.888 60.000 5.05 0.00 41.25 3.33
265 266 2.167398 TAGTGAGCCGGAGCCACAAC 62.167 60.000 5.05 0.00 41.25 3.32
266 267 4.329545 TGAGCCGGAGCCACAACC 62.330 66.667 5.05 0.00 41.25 3.77
267 268 4.021925 GAGCCGGAGCCACAACCT 62.022 66.667 5.05 0.00 41.25 3.50
268 269 2.606519 AGCCGGAGCCACAACCTA 60.607 61.111 5.05 0.00 41.25 3.08
269 270 1.972660 GAGCCGGAGCCACAACCTAT 61.973 60.000 5.05 0.00 41.25 2.57
270 271 1.077716 GCCGGAGCCACAACCTATT 60.078 57.895 5.05 0.00 0.00 1.73
271 272 1.376609 GCCGGAGCCACAACCTATTG 61.377 60.000 5.05 0.00 41.98 1.90
273 274 1.369625 CGGAGCCACAACCTATTGTC 58.630 55.000 0.00 0.00 46.46 3.18
274 275 1.066143 CGGAGCCACAACCTATTGTCT 60.066 52.381 0.00 0.00 46.46 3.41
275 276 2.633488 GGAGCCACAACCTATTGTCTC 58.367 52.381 0.00 0.00 46.46 3.36
276 277 2.633488 GAGCCACAACCTATTGTCTCC 58.367 52.381 0.00 0.00 46.46 3.71
277 278 1.066143 AGCCACAACCTATTGTCTCCG 60.066 52.381 0.00 0.00 46.46 4.63
278 279 1.369625 CCACAACCTATTGTCTCCGC 58.630 55.000 0.00 0.00 46.46 5.54
279 280 1.066143 CCACAACCTATTGTCTCCGCT 60.066 52.381 0.00 0.00 46.46 5.52
280 281 2.167693 CCACAACCTATTGTCTCCGCTA 59.832 50.000 0.00 0.00 46.46 4.26
281 282 3.448686 CACAACCTATTGTCTCCGCTAG 58.551 50.000 0.00 0.00 46.46 3.42
282 283 3.130516 CACAACCTATTGTCTCCGCTAGA 59.869 47.826 0.00 0.00 46.46 2.43
283 284 3.767673 ACAACCTATTGTCTCCGCTAGAA 59.232 43.478 0.00 0.00 46.46 2.10
284 285 4.142138 ACAACCTATTGTCTCCGCTAGAAG 60.142 45.833 0.00 0.00 46.46 2.85
285 286 2.959707 ACCTATTGTCTCCGCTAGAAGG 59.040 50.000 0.00 0.00 35.47 3.46
286 287 3.223435 CCTATTGTCTCCGCTAGAAGGA 58.777 50.000 7.11 7.11 35.47 3.36
287 288 3.004944 CCTATTGTCTCCGCTAGAAGGAC 59.995 52.174 0.00 0.00 35.47 3.85
288 289 2.217510 TTGTCTCCGCTAGAAGGACT 57.782 50.000 0.00 0.00 35.47 3.85
289 290 2.217510 TGTCTCCGCTAGAAGGACTT 57.782 50.000 0.00 0.00 35.47 3.01
290 291 2.526432 TGTCTCCGCTAGAAGGACTTT 58.474 47.619 0.00 0.00 35.47 2.66
291 292 2.231478 TGTCTCCGCTAGAAGGACTTTG 59.769 50.000 0.00 0.00 35.47 2.77
292 293 1.825474 TCTCCGCTAGAAGGACTTTGG 59.175 52.381 0.00 0.00 33.58 3.28
293 294 0.249398 TCCGCTAGAAGGACTTTGGC 59.751 55.000 0.00 0.00 31.86 4.52
294 295 0.036388 CCGCTAGAAGGACTTTGGCA 60.036 55.000 0.00 0.00 0.00 4.92
295 296 1.363744 CGCTAGAAGGACTTTGGCAG 58.636 55.000 0.00 0.00 0.00 4.85
296 297 1.090728 GCTAGAAGGACTTTGGCAGC 58.909 55.000 0.00 0.00 0.00 5.25
297 298 1.611673 GCTAGAAGGACTTTGGCAGCA 60.612 52.381 0.00 0.00 0.00 4.41
298 299 2.783135 CTAGAAGGACTTTGGCAGCAA 58.217 47.619 0.00 0.00 0.00 3.91
299 300 1.322442 AGAAGGACTTTGGCAGCAAC 58.678 50.000 0.00 0.00 0.00 4.17
300 301 1.133668 AGAAGGACTTTGGCAGCAACT 60.134 47.619 0.00 0.00 0.00 3.16
301 302 1.268079 GAAGGACTTTGGCAGCAACTC 59.732 52.381 0.00 0.00 0.00 3.01
302 303 0.475906 AGGACTTTGGCAGCAACTCT 59.524 50.000 0.00 0.00 0.00 3.24
303 304 1.133668 AGGACTTTGGCAGCAACTCTT 60.134 47.619 0.00 0.00 0.00 2.85
304 305 1.268079 GGACTTTGGCAGCAACTCTTC 59.732 52.381 0.00 0.00 0.00 2.87
305 306 1.949525 GACTTTGGCAGCAACTCTTCA 59.050 47.619 0.00 0.00 0.00 3.02
306 307 2.358898 GACTTTGGCAGCAACTCTTCAA 59.641 45.455 0.00 0.00 0.00 2.69
307 308 2.099756 ACTTTGGCAGCAACTCTTCAAC 59.900 45.455 0.00 0.00 0.00 3.18
308 309 2.057137 TTGGCAGCAACTCTTCAACT 57.943 45.000 0.00 0.00 0.00 3.16
309 310 2.928801 TGGCAGCAACTCTTCAACTA 57.071 45.000 0.00 0.00 0.00 2.24
310 311 3.207265 TGGCAGCAACTCTTCAACTAA 57.793 42.857 0.00 0.00 0.00 2.24
311 312 3.550820 TGGCAGCAACTCTTCAACTAAA 58.449 40.909 0.00 0.00 0.00 1.85
312 313 3.315191 TGGCAGCAACTCTTCAACTAAAC 59.685 43.478 0.00 0.00 0.00 2.01
313 314 3.315191 GGCAGCAACTCTTCAACTAAACA 59.685 43.478 0.00 0.00 0.00 2.83
314 315 4.202010 GGCAGCAACTCTTCAACTAAACAA 60.202 41.667 0.00 0.00 0.00 2.83
315 316 5.339990 GCAGCAACTCTTCAACTAAACAAA 58.660 37.500 0.00 0.00 0.00 2.83
316 317 5.230097 GCAGCAACTCTTCAACTAAACAAAC 59.770 40.000 0.00 0.00 0.00 2.93
317 318 6.321717 CAGCAACTCTTCAACTAAACAAACA 58.678 36.000 0.00 0.00 0.00 2.83
318 319 6.251376 CAGCAACTCTTCAACTAAACAAACAC 59.749 38.462 0.00 0.00 0.00 3.32
319 320 6.072175 AGCAACTCTTCAACTAAACAAACACA 60.072 34.615 0.00 0.00 0.00 3.72
320 321 6.751888 GCAACTCTTCAACTAAACAAACACAT 59.248 34.615 0.00 0.00 0.00 3.21
321 322 7.275560 GCAACTCTTCAACTAAACAAACACATT 59.724 33.333 0.00 0.00 0.00 2.71
322 323 9.781834 CAACTCTTCAACTAAACAAACACATTA 57.218 29.630 0.00 0.00 0.00 1.90
323 324 9.783256 AACTCTTCAACTAAACAAACACATTAC 57.217 29.630 0.00 0.00 0.00 1.89
324 325 9.174166 ACTCTTCAACTAAACAAACACATTACT 57.826 29.630 0.00 0.00 0.00 2.24
326 327 9.781834 TCTTCAACTAAACAAACACATTACTTG 57.218 29.630 0.00 0.00 0.00 3.16
327 328 8.918961 TTCAACTAAACAAACACATTACTTGG 57.081 30.769 0.00 0.00 0.00 3.61
328 329 7.484975 TCAACTAAACAAACACATTACTTGGG 58.515 34.615 0.00 0.00 33.70 4.12
329 330 5.838529 ACTAAACAAACACATTACTTGGGC 58.161 37.500 0.00 0.00 28.72 5.36
330 331 3.744238 AACAAACACATTACTTGGGCC 57.256 42.857 0.00 0.00 28.72 5.80
331 332 1.611491 ACAAACACATTACTTGGGCCG 59.389 47.619 0.00 0.00 28.72 6.13
332 333 1.067915 CAAACACATTACTTGGGCCGG 60.068 52.381 0.00 0.00 28.72 6.13
333 334 1.248101 AACACATTACTTGGGCCGGC 61.248 55.000 21.18 21.18 28.72 6.13
334 335 1.378514 CACATTACTTGGGCCGGCT 60.379 57.895 28.56 8.66 0.00 5.52
335 336 0.107410 CACATTACTTGGGCCGGCTA 60.107 55.000 28.56 13.55 0.00 3.93
336 337 0.843984 ACATTACTTGGGCCGGCTAT 59.156 50.000 28.56 9.97 0.00 2.97
337 338 2.051692 ACATTACTTGGGCCGGCTATA 58.948 47.619 28.56 10.25 0.00 1.31
338 339 2.642807 ACATTACTTGGGCCGGCTATAT 59.357 45.455 28.56 11.12 0.00 0.86
339 340 3.841845 ACATTACTTGGGCCGGCTATATA 59.158 43.478 28.56 10.05 0.00 0.86
340 341 4.287585 ACATTACTTGGGCCGGCTATATAA 59.712 41.667 28.56 18.03 0.00 0.98
341 342 4.978438 TTACTTGGGCCGGCTATATAAA 57.022 40.909 28.56 11.83 0.00 1.40
342 343 3.868619 ACTTGGGCCGGCTATATAAAA 57.131 42.857 28.56 9.29 0.00 1.52
343 344 3.483421 ACTTGGGCCGGCTATATAAAAC 58.517 45.455 28.56 5.59 0.00 2.43
344 345 2.572209 TGGGCCGGCTATATAAAACC 57.428 50.000 28.56 16.05 0.00 3.27
345 346 1.074244 TGGGCCGGCTATATAAAACCC 59.926 52.381 28.56 15.25 36.60 4.11
346 347 1.074244 GGGCCGGCTATATAAAACCCA 59.926 52.381 28.56 0.00 36.07 4.51
347 348 2.489437 GGGCCGGCTATATAAAACCCAA 60.489 50.000 28.56 0.00 36.07 4.12
348 349 2.555325 GGCCGGCTATATAAAACCCAAC 59.445 50.000 28.56 0.00 0.00 3.77
349 350 2.555325 GCCGGCTATATAAAACCCAACC 59.445 50.000 22.15 0.00 0.00 3.77
350 351 2.809696 CCGGCTATATAAAACCCAACCG 59.190 50.000 0.00 0.00 37.88 4.44
351 352 2.224784 CGGCTATATAAAACCCAACCGC 59.775 50.000 0.00 0.00 0.00 5.68
352 353 3.215975 GGCTATATAAAACCCAACCGCA 58.784 45.455 0.00 0.00 0.00 5.69
353 354 3.252458 GGCTATATAAAACCCAACCGCAG 59.748 47.826 0.00 0.00 0.00 5.18
354 355 4.131596 GCTATATAAAACCCAACCGCAGA 58.868 43.478 0.00 0.00 0.00 4.26
355 356 4.577283 GCTATATAAAACCCAACCGCAGAA 59.423 41.667 0.00 0.00 0.00 3.02
356 357 5.066764 GCTATATAAAACCCAACCGCAGAAA 59.933 40.000 0.00 0.00 0.00 2.52
357 358 3.653539 ATAAAACCCAACCGCAGAAAC 57.346 42.857 0.00 0.00 0.00 2.78
358 359 1.187087 AAAACCCAACCGCAGAAACA 58.813 45.000 0.00 0.00 0.00 2.83
359 360 0.458260 AAACCCAACCGCAGAAACAC 59.542 50.000 0.00 0.00 0.00 3.32
360 361 1.720694 AACCCAACCGCAGAAACACG 61.721 55.000 0.00 0.00 0.00 4.49
361 362 1.890041 CCCAACCGCAGAAACACGA 60.890 57.895 0.00 0.00 0.00 4.35
362 363 1.440938 CCCAACCGCAGAAACACGAA 61.441 55.000 0.00 0.00 0.00 3.85
363 364 0.316689 CCAACCGCAGAAACACGAAC 60.317 55.000 0.00 0.00 0.00 3.95
364 365 0.316689 CAACCGCAGAAACACGAACC 60.317 55.000 0.00 0.00 0.00 3.62
365 366 1.441732 AACCGCAGAAACACGAACCC 61.442 55.000 0.00 0.00 0.00 4.11
366 367 2.549282 CGCAGAAACACGAACCCG 59.451 61.111 0.00 0.00 42.50 5.28
367 368 2.943653 GCAGAAACACGAACCCGG 59.056 61.111 0.00 0.00 40.78 5.73
368 369 1.890510 GCAGAAACACGAACCCGGT 60.891 57.895 0.00 0.00 40.78 5.28
369 370 1.441732 GCAGAAACACGAACCCGGTT 61.442 55.000 1.22 1.22 40.78 4.44
370 371 1.868469 CAGAAACACGAACCCGGTTA 58.132 50.000 1.75 0.00 40.78 2.85
371 372 2.419667 CAGAAACACGAACCCGGTTAT 58.580 47.619 1.75 0.00 40.78 1.89
372 373 3.587923 CAGAAACACGAACCCGGTTATA 58.412 45.455 1.75 0.00 40.78 0.98
373 374 3.995705 CAGAAACACGAACCCGGTTATAA 59.004 43.478 1.75 0.00 40.78 0.98
374 375 4.451774 CAGAAACACGAACCCGGTTATAAA 59.548 41.667 1.75 0.00 40.78 1.40
375 376 4.452114 AGAAACACGAACCCGGTTATAAAC 59.548 41.667 1.75 0.00 40.78 2.01
376 377 3.399440 ACACGAACCCGGTTATAAACA 57.601 42.857 1.75 0.00 40.78 2.83
377 378 3.737850 ACACGAACCCGGTTATAAACAA 58.262 40.909 1.75 0.00 40.78 2.83
378 379 4.325972 ACACGAACCCGGTTATAAACAAT 58.674 39.130 1.75 0.00 40.78 2.71
379 380 4.154556 ACACGAACCCGGTTATAAACAATG 59.845 41.667 1.75 0.00 40.78 2.82
380 381 4.392445 CACGAACCCGGTTATAAACAATGA 59.608 41.667 1.75 0.00 40.78 2.57
381 382 5.002516 ACGAACCCGGTTATAAACAATGAA 58.997 37.500 1.75 0.00 40.78 2.57
382 383 5.472820 ACGAACCCGGTTATAAACAATGAAA 59.527 36.000 1.75 0.00 40.78 2.69
383 384 5.796437 CGAACCCGGTTATAAACAATGAAAC 59.204 40.000 1.75 0.00 0.00 2.78
384 385 6.348704 CGAACCCGGTTATAAACAATGAAACT 60.349 38.462 1.75 0.00 0.00 2.66
385 386 7.148440 CGAACCCGGTTATAAACAATGAAACTA 60.148 37.037 1.75 0.00 0.00 2.24
386 387 7.619964 ACCCGGTTATAAACAATGAAACTAG 57.380 36.000 0.00 0.00 0.00 2.57
387 388 6.094464 ACCCGGTTATAAACAATGAAACTAGC 59.906 38.462 0.00 0.00 0.00 3.42
388 389 6.094325 CCCGGTTATAAACAATGAAACTAGCA 59.906 38.462 0.00 0.00 0.00 3.49
389 390 6.964934 CCGGTTATAAACAATGAAACTAGCAC 59.035 38.462 0.64 0.00 0.00 4.40
390 391 7.148306 CCGGTTATAAACAATGAAACTAGCACT 60.148 37.037 0.64 0.00 0.00 4.40
391 392 8.234546 CGGTTATAAACAATGAAACTAGCACTT 58.765 33.333 0.64 0.00 0.00 3.16
392 393 9.908152 GGTTATAAACAATGAAACTAGCACTTT 57.092 29.630 0.00 0.00 0.00 2.66
396 397 6.715347 AACAATGAAACTAGCACTTTTCCT 57.285 33.333 0.00 0.00 31.76 3.36
397 398 7.817418 AACAATGAAACTAGCACTTTTCCTA 57.183 32.000 0.00 0.00 31.76 2.94
398 399 8.409358 AACAATGAAACTAGCACTTTTCCTAT 57.591 30.769 0.00 0.00 31.76 2.57
399 400 8.409358 ACAATGAAACTAGCACTTTTCCTATT 57.591 30.769 0.00 0.00 31.76 1.73
400 401 8.299570 ACAATGAAACTAGCACTTTTCCTATTG 58.700 33.333 11.27 11.27 31.76 1.90
401 402 8.514594 CAATGAAACTAGCACTTTTCCTATTGA 58.485 33.333 9.05 0.00 31.76 2.57
402 403 8.635765 ATGAAACTAGCACTTTTCCTATTGAA 57.364 30.769 0.00 0.00 31.76 2.69
403 404 8.635765 TGAAACTAGCACTTTTCCTATTGAAT 57.364 30.769 0.00 0.00 31.76 2.57
404 405 8.514594 TGAAACTAGCACTTTTCCTATTGAATG 58.485 33.333 0.00 0.00 31.76 2.67
405 406 8.635765 AAACTAGCACTTTTCCTATTGAATGA 57.364 30.769 0.00 0.00 31.67 2.57
406 407 8.635765 AACTAGCACTTTTCCTATTGAATGAA 57.364 30.769 0.00 0.00 31.67 2.57
407 408 8.635765 ACTAGCACTTTTCCTATTGAATGAAA 57.364 30.769 0.00 0.00 31.67 2.69
408 409 9.247861 ACTAGCACTTTTCCTATTGAATGAAAT 57.752 29.630 0.00 0.00 31.67 2.17
440 441 4.032653 GGGGGCATTAAAGCTGCA 57.967 55.556 1.02 0.00 41.47 4.41
441 442 1.818555 GGGGGCATTAAAGCTGCAG 59.181 57.895 10.11 10.11 41.47 4.41
442 443 0.972471 GGGGGCATTAAAGCTGCAGT 60.972 55.000 16.64 0.00 41.47 4.40
443 444 0.897621 GGGGCATTAAAGCTGCAGTT 59.102 50.000 16.64 6.37 41.47 3.16
444 445 1.134995 GGGGCATTAAAGCTGCAGTTC 60.135 52.381 16.64 0.00 41.47 3.01
445 446 1.545582 GGGCATTAAAGCTGCAGTTCA 59.454 47.619 16.64 0.00 41.47 3.18
446 447 2.029110 GGGCATTAAAGCTGCAGTTCAA 60.029 45.455 16.64 7.76 41.47 2.69
447 448 3.368739 GGGCATTAAAGCTGCAGTTCAAT 60.369 43.478 16.64 9.76 41.47 2.57
448 449 4.248058 GGCATTAAAGCTGCAGTTCAATT 58.752 39.130 16.64 3.30 41.47 2.32
449 450 4.092383 GGCATTAAAGCTGCAGTTCAATTG 59.908 41.667 16.64 8.32 41.47 2.32
450 451 4.687483 GCATTAAAGCTGCAGTTCAATTGT 59.313 37.500 16.64 0.00 39.46 2.71
451 452 5.178067 GCATTAAAGCTGCAGTTCAATTGTT 59.822 36.000 16.64 1.75 39.46 2.83
452 453 6.293027 GCATTAAAGCTGCAGTTCAATTGTTT 60.293 34.615 16.64 0.99 39.46 2.83
453 454 7.632721 CATTAAAGCTGCAGTTCAATTGTTTT 58.367 30.769 16.64 0.22 0.00 2.43
454 455 7.608308 TTAAAGCTGCAGTTCAATTGTTTTT 57.392 28.000 16.64 0.00 0.00 1.94
482 483 5.064707 GGATCGCTGCAGTTCAATTAAACTA 59.935 40.000 16.64 0.00 37.38 2.24
485 486 5.411361 TCGCTGCAGTTCAATTAAACTATGT 59.589 36.000 16.64 0.00 37.38 2.29
544 545 3.321950 AGCTTATATCTGGAGCCCAAGT 58.678 45.455 0.00 0.00 37.11 3.16
545 546 3.072184 AGCTTATATCTGGAGCCCAAGTG 59.928 47.826 0.00 0.00 37.11 3.16
547 548 0.107456 ATATCTGGAGCCCAAGTGCG 59.893 55.000 0.00 0.00 36.02 5.34
587 589 2.762327 CTGCCAATGCCCAAGTTTATCT 59.238 45.455 0.00 0.00 36.33 1.98
588 590 3.172339 TGCCAATGCCCAAGTTTATCTT 58.828 40.909 0.00 0.00 36.33 2.40
589 591 3.582208 TGCCAATGCCCAAGTTTATCTTT 59.418 39.130 0.00 0.00 36.33 2.52
590 592 4.041444 TGCCAATGCCCAAGTTTATCTTTT 59.959 37.500 0.00 0.00 36.33 2.27
591 593 5.003160 GCCAATGCCCAAGTTTATCTTTTT 58.997 37.500 0.00 0.00 33.63 1.94
633 645 7.966753 CCAAGTTTATCTGAGAAATGTGTCATG 59.033 37.037 0.33 0.00 0.00 3.07
764 781 8.449397 GGATGCAAATTTTGTTATAAATGCACA 58.551 29.630 10.65 0.00 32.61 4.57
765 782 9.264782 GATGCAAATTTTGTTATAAATGCACAC 57.735 29.630 10.65 0.15 32.61 3.82
858 887 2.972348 ACCTCTACTGGTGGTGAAAGA 58.028 47.619 0.00 0.00 39.96 2.52
859 888 3.521727 ACCTCTACTGGTGGTGAAAGAT 58.478 45.455 0.00 0.00 39.96 2.40
860 889 3.261897 ACCTCTACTGGTGGTGAAAGATG 59.738 47.826 0.00 0.00 39.96 2.90
910 998 8.884124 ATAATAACATGGGAGTAAATGATGGG 57.116 34.615 0.00 0.00 0.00 4.00
962 1073 2.895865 TTCGGCCGCACGTTTTCA 60.896 55.556 23.51 0.00 34.94 2.69
978 1089 6.198778 CACGTTTTCATCACAAATCACACAAT 59.801 34.615 0.00 0.00 0.00 2.71
980 1091 6.417339 CGTTTTCATCACAAATCACACAATGA 59.583 34.615 0.00 0.00 43.13 2.57
981 1092 7.558137 GTTTTCATCACAAATCACACAATGAC 58.442 34.615 0.00 0.00 41.24 3.06
982 1093 6.388435 TTCATCACAAATCACACAATGACA 57.612 33.333 0.00 0.00 41.24 3.58
983 1094 5.761003 TCATCACAAATCACACAATGACAC 58.239 37.500 0.00 0.00 41.24 3.67
984 1095 5.298777 TCATCACAAATCACACAATGACACA 59.701 36.000 0.00 0.00 41.24 3.72
985 1096 5.573337 TCACAAATCACACAATGACACAA 57.427 34.783 0.00 0.00 41.24 3.33
986 1097 5.580661 TCACAAATCACACAATGACACAAG 58.419 37.500 0.00 0.00 41.24 3.16
987 1098 4.207635 CACAAATCACACAATGACACAAGC 59.792 41.667 0.00 0.00 41.24 4.01
988 1099 2.975410 ATCACACAATGACACAAGCG 57.025 45.000 0.00 0.00 41.24 4.68
989 1100 1.946745 TCACACAATGACACAAGCGA 58.053 45.000 0.00 0.00 29.99 4.93
990 1101 2.493035 TCACACAATGACACAAGCGAT 58.507 42.857 0.00 0.00 29.99 4.58
991 1102 2.480037 TCACACAATGACACAAGCGATC 59.520 45.455 0.00 0.00 29.99 3.69
1119 1234 4.530857 GGCATCCCCGTGGAGTCG 62.531 72.222 0.00 0.00 46.08 4.18
1513 1673 1.971149 TGGGATGAAGATGGAGGTGT 58.029 50.000 0.00 0.00 0.00 4.16
1522 1682 3.254024 ATGGAGGTGTGCGTGGTCC 62.254 63.158 0.00 0.00 0.00 4.46
1593 1771 3.380142 CAATTGCAAGGTTAACAAGCGT 58.620 40.909 4.94 0.00 0.00 5.07
1608 1786 2.109431 GCGTATGTCGGTGGAGGTA 58.891 57.895 0.00 0.00 40.26 3.08
1872 2054 4.707105 TCTTGTTCATCACACACATCACT 58.293 39.130 0.00 0.00 33.98 3.41
1873 2055 4.751600 TCTTGTTCATCACACACATCACTC 59.248 41.667 0.00 0.00 33.98 3.51
1887 2070 1.153309 CACTCCATGCATGCTCCGA 60.153 57.895 21.69 11.77 0.00 4.55
1922 2110 5.822519 GGTTTACAGATCTGCATTCACCATA 59.177 40.000 22.83 1.26 0.00 2.74
1937 2125 7.467267 GCATTCACCATACATTGAGTCGTTATT 60.467 37.037 0.00 0.00 0.00 1.40
1938 2126 9.040939 CATTCACCATACATTGAGTCGTTATTA 57.959 33.333 0.00 0.00 0.00 0.98
1939 2127 9.778741 ATTCACCATACATTGAGTCGTTATTAT 57.221 29.630 0.00 0.00 0.00 1.28
1940 2128 8.587952 TCACCATACATTGAGTCGTTATTATG 57.412 34.615 0.00 0.00 0.00 1.90
1941 2129 8.201464 TCACCATACATTGAGTCGTTATTATGT 58.799 33.333 0.00 0.00 0.00 2.29
1942 2130 8.826710 CACCATACATTGAGTCGTTATTATGTT 58.173 33.333 0.00 0.00 0.00 2.71
1943 2131 8.826710 ACCATACATTGAGTCGTTATTATGTTG 58.173 33.333 0.00 0.00 0.00 3.33
1944 2132 7.798516 CCATACATTGAGTCGTTATTATGTTGC 59.201 37.037 0.00 0.00 0.00 4.17
1945 2133 6.735678 ACATTGAGTCGTTATTATGTTGCA 57.264 33.333 0.00 0.00 0.00 4.08
1978 2178 7.219484 ACTCCATCATTTCATTTCTTTCGTT 57.781 32.000 0.00 0.00 0.00 3.85
1979 2179 7.661040 ACTCCATCATTTCATTTCTTTCGTTT 58.339 30.769 0.00 0.00 0.00 3.60
1980 2180 8.792633 ACTCCATCATTTCATTTCTTTCGTTTA 58.207 29.630 0.00 0.00 0.00 2.01
1981 2181 9.624697 CTCCATCATTTCATTTCTTTCGTTTAA 57.375 29.630 0.00 0.00 0.00 1.52
2058 2300 2.168521 TGACCTATTCCTTTGCTCCTCG 59.831 50.000 0.00 0.00 0.00 4.63
2084 2330 2.025155 ACCGAACTATGCGTCTCTGAT 58.975 47.619 0.00 0.00 0.00 2.90
2114 2362 5.067283 GCAATTATCAACGGAACAATAGGGT 59.933 40.000 0.00 0.00 0.00 4.34
2133 2381 3.751698 GGGTGAACTCCAACAATCTGTAC 59.248 47.826 0.00 0.00 32.95 2.90
2137 2385 6.293462 GGTGAACTCCAACAATCTGTACTTTC 60.293 42.308 0.00 0.00 31.20 2.62
2148 2396 3.735591 TCTGTACTTTCTTTTGGGTCGG 58.264 45.455 0.00 0.00 0.00 4.79
2161 2409 2.385803 TGGGTCGGAAGGAAGATACTC 58.614 52.381 0.00 0.00 0.00 2.59
2162 2410 1.687660 GGGTCGGAAGGAAGATACTCC 59.312 57.143 0.00 0.00 35.51 3.85
2163 2411 2.385803 GGTCGGAAGGAAGATACTCCA 58.614 52.381 0.00 0.00 38.02 3.86
2164 2412 2.101082 GGTCGGAAGGAAGATACTCCAC 59.899 54.545 0.00 0.00 38.02 4.02
2167 2415 3.700038 TCGGAAGGAAGATACTCCACTTC 59.300 47.826 0.00 0.00 40.91 3.01
2191 2439 7.421599 TCCATTTACAATACAATAATGTGCCG 58.578 34.615 0.00 0.00 40.84 5.69
2229 2477 7.040201 TGAGCATGAAAAATTTGTAAGCTCTCT 60.040 33.333 20.76 2.47 44.49 3.10
2230 2478 7.664758 AGCATGAAAAATTTGTAAGCTCTCTT 58.335 30.769 0.00 0.00 36.35 2.85
2231 2479 8.146412 AGCATGAAAAATTTGTAAGCTCTCTTT 58.854 29.630 0.00 0.00 33.85 2.52
2232 2480 8.430828 GCATGAAAAATTTGTAAGCTCTCTTTC 58.569 33.333 0.00 0.00 33.85 2.62
2233 2481 9.688592 CATGAAAAATTTGTAAGCTCTCTTTCT 57.311 29.630 0.00 0.00 33.85 2.52
2241 2489 9.950496 ATTTGTAAGCTCTCTTTCTTAATCTCA 57.050 29.630 0.00 0.00 33.85 3.27
2242 2490 9.950496 TTTGTAAGCTCTCTTTCTTAATCTCAT 57.050 29.630 0.00 0.00 33.85 2.90
2243 2491 9.593134 TTGTAAGCTCTCTTTCTTAATCTCATC 57.407 33.333 0.00 0.00 33.85 2.92
2244 2492 8.200792 TGTAAGCTCTCTTTCTTAATCTCATCC 58.799 37.037 0.00 0.00 33.85 3.51
2245 2493 5.841810 AGCTCTCTTTCTTAATCTCATCCG 58.158 41.667 0.00 0.00 0.00 4.18
2246 2494 5.362430 AGCTCTCTTTCTTAATCTCATCCGT 59.638 40.000 0.00 0.00 0.00 4.69
2247 2495 5.689961 GCTCTCTTTCTTAATCTCATCCGTC 59.310 44.000 0.00 0.00 0.00 4.79
2248 2496 6.681616 GCTCTCTTTCTTAATCTCATCCGTCA 60.682 42.308 0.00 0.00 0.00 4.35
2249 2497 7.170393 TCTCTTTCTTAATCTCATCCGTCAA 57.830 36.000 0.00 0.00 0.00 3.18
2250 2498 7.611770 TCTCTTTCTTAATCTCATCCGTCAAA 58.388 34.615 0.00 0.00 0.00 2.69
2251 2499 8.260818 TCTCTTTCTTAATCTCATCCGTCAAAT 58.739 33.333 0.00 0.00 0.00 2.32
2252 2500 8.792830 TCTTTCTTAATCTCATCCGTCAAATT 57.207 30.769 0.00 0.00 0.00 1.82
2253 2501 8.668353 TCTTTCTTAATCTCATCCGTCAAATTG 58.332 33.333 0.00 0.00 0.00 2.32
2254 2502 8.560355 TTTCTTAATCTCATCCGTCAAATTGA 57.440 30.769 0.00 0.00 0.00 2.57
2255 2503 8.737168 TTCTTAATCTCATCCGTCAAATTGAT 57.263 30.769 0.00 0.00 0.00 2.57
2256 2504 8.370493 TCTTAATCTCATCCGTCAAATTGATC 57.630 34.615 0.00 0.00 0.00 2.92
2257 2505 7.986889 TCTTAATCTCATCCGTCAAATTGATCA 59.013 33.333 0.00 0.00 0.00 2.92
2258 2506 8.504812 TTAATCTCATCCGTCAAATTGATCAA 57.495 30.769 11.26 11.26 0.00 2.57
2259 2507 6.615264 ATCTCATCCGTCAAATTGATCAAG 57.385 37.500 14.54 0.40 0.00 3.02
2260 2508 4.877823 TCTCATCCGTCAAATTGATCAAGG 59.122 41.667 14.54 8.44 0.00 3.61
2261 2509 4.588899 TCATCCGTCAAATTGATCAAGGT 58.411 39.130 14.54 1.32 0.00 3.50
2262 2510 5.739959 TCATCCGTCAAATTGATCAAGGTA 58.260 37.500 14.54 0.00 0.00 3.08
2263 2511 6.176896 TCATCCGTCAAATTGATCAAGGTAA 58.823 36.000 14.54 0.00 0.00 2.85
2264 2512 6.657117 TCATCCGTCAAATTGATCAAGGTAAA 59.343 34.615 14.54 0.00 0.00 2.01
2265 2513 6.249035 TCCGTCAAATTGATCAAGGTAAAC 57.751 37.500 14.54 7.35 0.00 2.01
2266 2514 6.001460 TCCGTCAAATTGATCAAGGTAAACT 58.999 36.000 14.54 0.00 0.00 2.66
2267 2515 6.072728 TCCGTCAAATTGATCAAGGTAAACTG 60.073 38.462 14.54 5.36 0.00 3.16
2268 2516 6.086222 CGTCAAATTGATCAAGGTAAACTGG 58.914 40.000 14.54 0.00 0.00 4.00
2269 2517 6.389906 GTCAAATTGATCAAGGTAAACTGGG 58.610 40.000 14.54 0.00 0.00 4.45
2270 2518 5.480073 TCAAATTGATCAAGGTAAACTGGGG 59.520 40.000 14.54 0.00 0.00 4.96
2271 2519 4.675063 ATTGATCAAGGTAAACTGGGGT 57.325 40.909 14.54 0.00 0.00 4.95
2272 2520 5.789574 ATTGATCAAGGTAAACTGGGGTA 57.210 39.130 14.54 0.00 0.00 3.69
2273 2521 5.789574 TTGATCAAGGTAAACTGGGGTAT 57.210 39.130 3.38 0.00 0.00 2.73
2274 2522 6.894735 TTGATCAAGGTAAACTGGGGTATA 57.105 37.500 3.38 0.00 0.00 1.47
2275 2523 6.243216 TGATCAAGGTAAACTGGGGTATAC 57.757 41.667 0.00 0.00 0.00 1.47
2276 2524 5.727279 TGATCAAGGTAAACTGGGGTATACA 59.273 40.000 5.01 0.00 0.00 2.29
2277 2525 6.215841 TGATCAAGGTAAACTGGGGTATACAA 59.784 38.462 5.01 0.00 0.00 2.41
2278 2526 6.451292 TCAAGGTAAACTGGGGTATACAAA 57.549 37.500 5.01 0.00 0.00 2.83
2279 2527 7.034967 TCAAGGTAAACTGGGGTATACAAAT 57.965 36.000 5.01 0.00 0.00 2.32
2280 2528 8.160434 TCAAGGTAAACTGGGGTATACAAATA 57.840 34.615 5.01 0.00 0.00 1.40
2281 2529 8.269317 TCAAGGTAAACTGGGGTATACAAATAG 58.731 37.037 5.01 0.20 0.00 1.73
2282 2530 7.760400 AGGTAAACTGGGGTATACAAATAGT 57.240 36.000 5.01 0.81 0.00 2.12
2283 2531 8.858944 AGGTAAACTGGGGTATACAAATAGTA 57.141 34.615 5.01 0.00 37.06 1.82
2284 2532 8.708378 AGGTAAACTGGGGTATACAAATAGTAC 58.292 37.037 5.01 0.00 35.05 2.73
2285 2533 8.708378 GGTAAACTGGGGTATACAAATAGTACT 58.292 37.037 5.01 0.00 35.05 2.73
2286 2534 9.755804 GTAAACTGGGGTATACAAATAGTACTC 57.244 37.037 0.00 0.00 35.05 2.59
2287 2535 6.990908 ACTGGGGTATACAAATAGTACTCC 57.009 41.667 0.00 0.00 39.05 3.85
2288 2536 5.842874 ACTGGGGTATACAAATAGTACTCCC 59.157 44.000 0.00 0.00 42.97 4.30
2289 2537 6.046917 TGGGGTATACAAATAGTACTCCCT 57.953 41.667 0.00 0.00 43.12 4.20
2290 2538 6.455241 TGGGGTATACAAATAGTACTCCCTT 58.545 40.000 0.00 0.00 43.12 3.95
2291 2539 6.910290 TGGGGTATACAAATAGTACTCCCTTT 59.090 38.462 0.00 0.00 43.12 3.11
2292 2540 7.147444 TGGGGTATACAAATAGTACTCCCTTTG 60.147 40.741 17.40 17.40 43.12 2.77
2293 2541 7.147426 GGGGTATACAAATAGTACTCCCTTTGT 60.147 40.741 23.44 23.44 43.12 2.83
2294 2542 8.270030 GGGTATACAAATAGTACTCCCTTTGTT 58.730 37.037 24.37 17.74 41.68 2.83
2653 2906 7.466805 TGTTCAAGATGCTTAATTCTCGAATG 58.533 34.615 0.00 0.00 0.00 2.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.119316 CCTCATCATCTATCCTACGTGGC 60.119 52.174 0.00 0.00 35.26 5.01
1 2 4.082517 CACCTCATCATCTATCCTACGTGG 60.083 50.000 0.00 0.00 37.10 4.94
2 3 4.082517 CCACCTCATCATCTATCCTACGTG 60.083 50.000 0.00 0.00 0.00 4.49
3 4 4.082845 CCACCTCATCATCTATCCTACGT 58.917 47.826 0.00 0.00 0.00 3.57
7 8 3.503784 CCCTCCACCTCATCATCTATCCT 60.504 52.174 0.00 0.00 0.00 3.24
9 10 2.836981 CCCCTCCACCTCATCATCTATC 59.163 54.545 0.00 0.00 0.00 2.08
10 11 2.456340 TCCCCTCCACCTCATCATCTAT 59.544 50.000 0.00 0.00 0.00 1.98
11 12 1.866269 TCCCCTCCACCTCATCATCTA 59.134 52.381 0.00 0.00 0.00 1.98
12 13 0.644380 TCCCCTCCACCTCATCATCT 59.356 55.000 0.00 0.00 0.00 2.90
13 14 1.055040 CTCCCCTCCACCTCATCATC 58.945 60.000 0.00 0.00 0.00 2.92
14 15 0.644380 TCTCCCCTCCACCTCATCAT 59.356 55.000 0.00 0.00 0.00 2.45
15 16 0.031716 CTCTCCCCTCCACCTCATCA 60.032 60.000 0.00 0.00 0.00 3.07
16 17 0.263172 TCTCTCCCCTCCACCTCATC 59.737 60.000 0.00 0.00 0.00 2.92
17 18 0.719015 TTCTCTCCCCTCCACCTCAT 59.281 55.000 0.00 0.00 0.00 2.90
18 19 0.252284 GTTCTCTCCCCTCCACCTCA 60.252 60.000 0.00 0.00 0.00 3.86
19 20 0.041982 AGTTCTCTCCCCTCCACCTC 59.958 60.000 0.00 0.00 0.00 3.85
20 21 0.494095 AAGTTCTCTCCCCTCCACCT 59.506 55.000 0.00 0.00 0.00 4.00
21 22 0.906066 GAAGTTCTCTCCCCTCCACC 59.094 60.000 0.00 0.00 0.00 4.61
22 23 1.945580 AGAAGTTCTCTCCCCTCCAC 58.054 55.000 0.00 0.00 0.00 4.02
23 24 3.336997 TCTTAGAAGTTCTCTCCCCTCCA 59.663 47.826 9.12 0.00 35.41 3.86
24 25 3.983821 TCTTAGAAGTTCTCTCCCCTCC 58.016 50.000 9.12 0.00 35.41 4.30
25 26 6.361768 TTTTCTTAGAAGTTCTCTCCCCTC 57.638 41.667 9.12 0.00 35.41 4.30
26 27 5.249622 CCTTTTCTTAGAAGTTCTCTCCCCT 59.750 44.000 9.12 0.00 35.41 4.79
27 28 5.492895 CCTTTTCTTAGAAGTTCTCTCCCC 58.507 45.833 9.12 0.00 35.41 4.81
28 29 4.938832 GCCTTTTCTTAGAAGTTCTCTCCC 59.061 45.833 9.12 0.00 35.41 4.30
29 30 5.800296 AGCCTTTTCTTAGAAGTTCTCTCC 58.200 41.667 9.12 0.00 35.41 3.71
30 31 6.708502 ACAAGCCTTTTCTTAGAAGTTCTCTC 59.291 38.462 9.12 0.00 35.41 3.20
31 32 6.596621 ACAAGCCTTTTCTTAGAAGTTCTCT 58.403 36.000 9.12 0.00 38.28 3.10
32 33 6.708502 AGACAAGCCTTTTCTTAGAAGTTCTC 59.291 38.462 9.12 0.00 0.00 2.87
33 34 6.596621 AGACAAGCCTTTTCTTAGAAGTTCT 58.403 36.000 10.87 10.87 0.00 3.01
34 35 6.869315 AGACAAGCCTTTTCTTAGAAGTTC 57.131 37.500 0.00 0.00 0.00 3.01
35 36 7.646548 AAAGACAAGCCTTTTCTTAGAAGTT 57.353 32.000 6.30 0.00 32.89 2.66
36 37 7.646548 AAAAGACAAGCCTTTTCTTAGAAGT 57.353 32.000 6.30 0.00 41.08 3.01
47 48 9.574516 TCTCTTAAATAAGAAAAGACAAGCCTT 57.425 29.630 4.57 0.00 41.37 4.35
48 49 9.574516 TTCTCTTAAATAAGAAAAGACAAGCCT 57.425 29.630 4.57 0.00 41.37 4.58
49 50 9.833182 CTTCTCTTAAATAAGAAAAGACAAGCC 57.167 33.333 9.63 0.00 40.91 4.35
59 60 9.712305 CACCTCTTGTCTTCTCTTAAATAAGAA 57.288 33.333 4.57 0.00 41.37 2.52
60 61 9.090103 TCACCTCTTGTCTTCTCTTAAATAAGA 57.910 33.333 3.08 3.08 39.82 2.10
61 62 9.883142 ATCACCTCTTGTCTTCTCTTAAATAAG 57.117 33.333 0.00 0.00 34.65 1.73
64 65 9.225436 GAAATCACCTCTTGTCTTCTCTTAAAT 57.775 33.333 0.00 0.00 0.00 1.40
65 66 8.432805 AGAAATCACCTCTTGTCTTCTCTTAAA 58.567 33.333 0.00 0.00 0.00 1.52
66 67 7.967908 AGAAATCACCTCTTGTCTTCTCTTAA 58.032 34.615 0.00 0.00 0.00 1.85
67 68 7.546250 AGAAATCACCTCTTGTCTTCTCTTA 57.454 36.000 0.00 0.00 0.00 2.10
68 69 6.432403 AGAAATCACCTCTTGTCTTCTCTT 57.568 37.500 0.00 0.00 0.00 2.85
69 70 6.432403 AAGAAATCACCTCTTGTCTTCTCT 57.568 37.500 0.00 0.00 31.86 3.10
70 71 6.312672 GCTAAGAAATCACCTCTTGTCTTCTC 59.687 42.308 0.00 0.00 34.90 2.87
71 72 6.169800 GCTAAGAAATCACCTCTTGTCTTCT 58.830 40.000 0.00 0.00 34.90 2.85
72 73 5.934625 TGCTAAGAAATCACCTCTTGTCTTC 59.065 40.000 0.00 0.00 34.90 2.87
73 74 5.869579 TGCTAAGAAATCACCTCTTGTCTT 58.130 37.500 0.00 0.00 34.90 3.01
74 75 5.489792 TGCTAAGAAATCACCTCTTGTCT 57.510 39.130 0.00 0.00 34.90 3.41
75 76 7.849804 TTATGCTAAGAAATCACCTCTTGTC 57.150 36.000 0.00 0.00 34.90 3.18
79 80 9.717942 GACATATTATGCTAAGAAATCACCTCT 57.282 33.333 3.52 0.00 0.00 3.69
80 81 9.717942 AGACATATTATGCTAAGAAATCACCTC 57.282 33.333 3.52 0.00 0.00 3.85
81 82 9.717942 GAGACATATTATGCTAAGAAATCACCT 57.282 33.333 3.52 0.00 0.00 4.00
82 83 9.494271 TGAGACATATTATGCTAAGAAATCACC 57.506 33.333 3.52 0.00 0.00 4.02
84 85 9.494271 GGTGAGACATATTATGCTAAGAAATCA 57.506 33.333 3.52 0.00 0.00 2.57
85 86 9.494271 TGGTGAGACATATTATGCTAAGAAATC 57.506 33.333 3.52 0.00 0.00 2.17
86 87 9.277783 GTGGTGAGACATATTATGCTAAGAAAT 57.722 33.333 3.52 0.00 0.00 2.17
87 88 8.264347 TGTGGTGAGACATATTATGCTAAGAAA 58.736 33.333 3.52 0.00 0.00 2.52
88 89 7.791029 TGTGGTGAGACATATTATGCTAAGAA 58.209 34.615 3.52 0.00 0.00 2.52
89 90 7.360113 TGTGGTGAGACATATTATGCTAAGA 57.640 36.000 3.52 0.00 0.00 2.10
90 91 8.613060 AATGTGGTGAGACATATTATGCTAAG 57.387 34.615 3.52 0.00 35.43 2.18
91 92 8.978874 AAATGTGGTGAGACATATTATGCTAA 57.021 30.769 3.52 0.00 35.43 3.09
92 93 8.978874 AAAATGTGGTGAGACATATTATGCTA 57.021 30.769 3.52 0.00 35.43 3.49
93 94 7.886629 AAAATGTGGTGAGACATATTATGCT 57.113 32.000 3.52 2.51 35.43 3.79
101 102 7.599998 GCAATTCTTAAAAATGTGGTGAGACAT 59.400 33.333 0.00 0.00 38.23 3.06
102 103 6.922957 GCAATTCTTAAAAATGTGGTGAGACA 59.077 34.615 0.00 0.00 0.00 3.41
103 104 7.147976 AGCAATTCTTAAAAATGTGGTGAGAC 58.852 34.615 0.00 0.00 0.00 3.36
104 105 7.288810 AGCAATTCTTAAAAATGTGGTGAGA 57.711 32.000 0.00 0.00 0.00 3.27
105 106 8.299570 ACTAGCAATTCTTAAAAATGTGGTGAG 58.700 33.333 0.00 0.00 0.00 3.51
106 107 8.177119 ACTAGCAATTCTTAAAAATGTGGTGA 57.823 30.769 0.00 0.00 0.00 4.02
107 108 8.816640 AACTAGCAATTCTTAAAAATGTGGTG 57.183 30.769 0.00 0.00 0.00 4.17
133 134 8.379331 GGGTCATCTCTTAGCCTTATCTTTAAT 58.621 37.037 0.00 0.00 0.00 1.40
134 135 7.347222 TGGGTCATCTCTTAGCCTTATCTTTAA 59.653 37.037 0.00 0.00 34.30 1.52
135 136 6.844388 TGGGTCATCTCTTAGCCTTATCTTTA 59.156 38.462 0.00 0.00 34.30 1.85
136 137 5.667626 TGGGTCATCTCTTAGCCTTATCTTT 59.332 40.000 0.00 0.00 34.30 2.52
137 138 5.219739 TGGGTCATCTCTTAGCCTTATCTT 58.780 41.667 0.00 0.00 34.30 2.40
138 139 4.820775 TGGGTCATCTCTTAGCCTTATCT 58.179 43.478 0.00 0.00 34.30 1.98
139 140 5.753721 ATGGGTCATCTCTTAGCCTTATC 57.246 43.478 0.00 0.00 34.30 1.75
140 141 5.370880 ACAATGGGTCATCTCTTAGCCTTAT 59.629 40.000 0.00 0.00 34.30 1.73
141 142 4.721776 ACAATGGGTCATCTCTTAGCCTTA 59.278 41.667 0.00 0.00 34.30 2.69
142 143 3.525199 ACAATGGGTCATCTCTTAGCCTT 59.475 43.478 0.00 0.00 34.30 4.35
143 144 3.118531 ACAATGGGTCATCTCTTAGCCT 58.881 45.455 0.00 0.00 34.30 4.58
144 145 3.567478 ACAATGGGTCATCTCTTAGCC 57.433 47.619 0.00 0.00 0.00 3.93
145 146 5.163405 TGTCTACAATGGGTCATCTCTTAGC 60.163 44.000 0.00 0.00 0.00 3.09
146 147 6.471233 TGTCTACAATGGGTCATCTCTTAG 57.529 41.667 0.00 0.00 0.00 2.18
147 148 6.867519 TTGTCTACAATGGGTCATCTCTTA 57.132 37.500 0.00 0.00 0.00 2.10
148 149 5.762179 TTGTCTACAATGGGTCATCTCTT 57.238 39.130 0.00 0.00 0.00 2.85
149 150 5.485353 TCTTTGTCTACAATGGGTCATCTCT 59.515 40.000 8.38 0.00 35.55 3.10
150 151 5.734720 TCTTTGTCTACAATGGGTCATCTC 58.265 41.667 8.38 0.00 35.55 2.75
151 152 5.762179 TCTTTGTCTACAATGGGTCATCT 57.238 39.130 8.38 0.00 35.55 2.90
152 153 6.817765 TTTCTTTGTCTACAATGGGTCATC 57.182 37.500 8.38 0.00 35.55 2.92
153 154 7.781324 ATTTTCTTTGTCTACAATGGGTCAT 57.219 32.000 8.38 0.00 35.55 3.06
154 155 7.595819 AATTTTCTTTGTCTACAATGGGTCA 57.404 32.000 8.38 0.00 35.55 4.02
155 156 9.788960 GATAATTTTCTTTGTCTACAATGGGTC 57.211 33.333 8.38 0.00 35.55 4.46
156 157 9.308000 TGATAATTTTCTTTGTCTACAATGGGT 57.692 29.630 8.38 0.00 35.55 4.51
213 214 8.840321 GCATGTACAATGGTTGATAAGATAGTT 58.160 33.333 0.00 0.00 0.00 2.24
214 215 7.445402 GGCATGTACAATGGTTGATAAGATAGT 59.555 37.037 0.00 0.00 0.00 2.12
215 216 7.094634 GGGCATGTACAATGGTTGATAAGATAG 60.095 40.741 0.00 0.00 0.00 2.08
216 217 6.714810 GGGCATGTACAATGGTTGATAAGATA 59.285 38.462 0.00 0.00 0.00 1.98
217 218 5.536161 GGGCATGTACAATGGTTGATAAGAT 59.464 40.000 0.00 0.00 0.00 2.40
218 219 4.887071 GGGCATGTACAATGGTTGATAAGA 59.113 41.667 0.00 0.00 0.00 2.10
219 220 4.889409 AGGGCATGTACAATGGTTGATAAG 59.111 41.667 0.00 0.00 0.00 1.73
220 221 4.865905 AGGGCATGTACAATGGTTGATAA 58.134 39.130 0.00 0.00 0.00 1.75
221 222 4.518278 AGGGCATGTACAATGGTTGATA 57.482 40.909 0.00 0.00 0.00 2.15
222 223 3.386932 AGGGCATGTACAATGGTTGAT 57.613 42.857 0.00 0.00 0.00 2.57
223 224 2.897271 AGGGCATGTACAATGGTTGA 57.103 45.000 0.00 0.00 0.00 3.18
224 225 4.016444 AGTAAGGGCATGTACAATGGTTG 58.984 43.478 0.00 0.00 0.00 3.77
225 226 4.316025 AGTAAGGGCATGTACAATGGTT 57.684 40.909 0.00 0.00 0.00 3.67
226 227 4.473559 ACTAGTAAGGGCATGTACAATGGT 59.526 41.667 0.00 0.00 0.00 3.55
227 228 4.816385 CACTAGTAAGGGCATGTACAATGG 59.184 45.833 0.00 0.00 0.00 3.16
228 229 5.670485 TCACTAGTAAGGGCATGTACAATG 58.330 41.667 0.00 0.12 0.00 2.82
229 230 5.685075 GCTCACTAGTAAGGGCATGTACAAT 60.685 44.000 0.00 0.00 0.00 2.71
230 231 4.382685 GCTCACTAGTAAGGGCATGTACAA 60.383 45.833 0.00 0.00 0.00 2.41
231 232 3.132289 GCTCACTAGTAAGGGCATGTACA 59.868 47.826 0.00 0.00 0.00 2.90
232 233 3.492829 GGCTCACTAGTAAGGGCATGTAC 60.493 52.174 7.33 0.00 0.00 2.90
233 234 2.698797 GGCTCACTAGTAAGGGCATGTA 59.301 50.000 7.33 0.00 0.00 2.29
234 235 1.486726 GGCTCACTAGTAAGGGCATGT 59.513 52.381 7.33 0.00 0.00 3.21
235 236 1.539065 CGGCTCACTAGTAAGGGCATG 60.539 57.143 7.33 0.00 0.00 4.06
236 237 0.753262 CGGCTCACTAGTAAGGGCAT 59.247 55.000 7.33 0.00 0.00 4.40
237 238 1.327690 CCGGCTCACTAGTAAGGGCA 61.328 60.000 7.33 0.00 0.00 5.36
238 239 1.041447 TCCGGCTCACTAGTAAGGGC 61.041 60.000 0.00 0.00 0.00 5.19
239 240 1.033574 CTCCGGCTCACTAGTAAGGG 58.966 60.000 0.00 0.00 0.00 3.95
240 241 0.386113 GCTCCGGCTCACTAGTAAGG 59.614 60.000 0.00 0.00 35.22 2.69
241 242 0.386113 GGCTCCGGCTCACTAGTAAG 59.614 60.000 0.00 0.00 38.73 2.34
242 243 0.323999 TGGCTCCGGCTCACTAGTAA 60.324 55.000 0.00 0.00 38.73 2.24
243 244 1.035932 GTGGCTCCGGCTCACTAGTA 61.036 60.000 0.00 0.00 36.99 1.82
244 245 2.037367 TGGCTCCGGCTCACTAGT 59.963 61.111 0.00 0.00 38.73 2.57
245 246 1.888436 TTGTGGCTCCGGCTCACTAG 61.888 60.000 17.83 2.78 39.04 2.57
246 247 1.911269 TTGTGGCTCCGGCTCACTA 60.911 57.895 17.83 10.77 39.04 2.74
247 248 3.241530 TTGTGGCTCCGGCTCACT 61.242 61.111 17.83 0.00 39.04 3.41
248 249 3.050275 GTTGTGGCTCCGGCTCAC 61.050 66.667 12.59 12.59 38.87 3.51
249 250 4.329545 GGTTGTGGCTCCGGCTCA 62.330 66.667 0.00 0.00 38.73 4.26
250 251 1.972660 ATAGGTTGTGGCTCCGGCTC 61.973 60.000 0.00 0.00 38.73 4.70
251 252 1.562672 AATAGGTTGTGGCTCCGGCT 61.563 55.000 0.00 0.00 38.73 5.52
252 253 1.077716 AATAGGTTGTGGCTCCGGC 60.078 57.895 0.00 0.00 37.82 6.13
253 254 0.035439 ACAATAGGTTGTGGCTCCGG 60.035 55.000 0.00 0.00 46.43 5.14
254 255 3.551259 ACAATAGGTTGTGGCTCCG 57.449 52.632 0.00 0.00 46.43 4.63
262 263 4.363999 CTTCTAGCGGAGACAATAGGTTG 58.636 47.826 0.00 0.00 41.20 3.77
263 264 3.385111 CCTTCTAGCGGAGACAATAGGTT 59.615 47.826 0.00 0.00 32.31 3.50
264 265 2.959707 CCTTCTAGCGGAGACAATAGGT 59.040 50.000 0.00 0.00 32.31 3.08
265 266 3.004944 GTCCTTCTAGCGGAGACAATAGG 59.995 52.174 1.31 2.33 32.31 2.57
266 267 3.886505 AGTCCTTCTAGCGGAGACAATAG 59.113 47.826 1.31 0.00 32.31 1.73
267 268 3.899726 AGTCCTTCTAGCGGAGACAATA 58.100 45.455 1.31 0.00 32.31 1.90
268 269 2.741145 AGTCCTTCTAGCGGAGACAAT 58.259 47.619 1.31 0.00 32.31 2.71
269 270 2.217510 AGTCCTTCTAGCGGAGACAA 57.782 50.000 1.31 0.00 32.31 3.18
270 271 2.217510 AAGTCCTTCTAGCGGAGACA 57.782 50.000 1.31 0.00 32.31 3.41
271 272 2.417515 CCAAAGTCCTTCTAGCGGAGAC 60.418 54.545 1.31 0.00 32.31 3.36
272 273 1.825474 CCAAAGTCCTTCTAGCGGAGA 59.175 52.381 1.31 0.00 0.00 3.71
273 274 1.740718 GCCAAAGTCCTTCTAGCGGAG 60.741 57.143 1.31 0.00 0.00 4.63
274 275 0.249398 GCCAAAGTCCTTCTAGCGGA 59.751 55.000 0.00 0.00 0.00 5.54
275 276 0.036388 TGCCAAAGTCCTTCTAGCGG 60.036 55.000 0.00 0.00 0.00 5.52
276 277 1.363744 CTGCCAAAGTCCTTCTAGCG 58.636 55.000 0.00 0.00 0.00 4.26
277 278 1.090728 GCTGCCAAAGTCCTTCTAGC 58.909 55.000 0.00 0.00 0.00 3.42
278 279 2.479566 TGCTGCCAAAGTCCTTCTAG 57.520 50.000 0.00 0.00 0.00 2.43
279 280 2.106511 AGTTGCTGCCAAAGTCCTTCTA 59.893 45.455 0.00 0.00 31.68 2.10
280 281 1.133668 AGTTGCTGCCAAAGTCCTTCT 60.134 47.619 0.00 0.00 31.68 2.85
281 282 1.268079 GAGTTGCTGCCAAAGTCCTTC 59.732 52.381 0.00 0.00 31.68 3.46
282 283 1.133668 AGAGTTGCTGCCAAAGTCCTT 60.134 47.619 0.00 0.00 31.68 3.36
283 284 0.475906 AGAGTTGCTGCCAAAGTCCT 59.524 50.000 0.00 0.00 31.68 3.85
284 285 1.268079 GAAGAGTTGCTGCCAAAGTCC 59.732 52.381 0.00 0.00 31.68 3.85
285 286 1.949525 TGAAGAGTTGCTGCCAAAGTC 59.050 47.619 0.00 0.00 31.68 3.01
286 287 2.057137 TGAAGAGTTGCTGCCAAAGT 57.943 45.000 0.00 0.00 31.68 2.66
287 288 2.360165 AGTTGAAGAGTTGCTGCCAAAG 59.640 45.455 0.00 0.00 31.68 2.77
288 289 2.378038 AGTTGAAGAGTTGCTGCCAAA 58.622 42.857 0.00 0.00 31.68 3.28
289 290 2.057137 AGTTGAAGAGTTGCTGCCAA 57.943 45.000 0.00 0.00 0.00 4.52
290 291 2.928801 TAGTTGAAGAGTTGCTGCCA 57.071 45.000 0.00 0.00 0.00 4.92
291 292 3.315191 TGTTTAGTTGAAGAGTTGCTGCC 59.685 43.478 0.00 0.00 0.00 4.85
292 293 4.552166 TGTTTAGTTGAAGAGTTGCTGC 57.448 40.909 0.00 0.00 0.00 5.25
293 294 6.251376 GTGTTTGTTTAGTTGAAGAGTTGCTG 59.749 38.462 0.00 0.00 0.00 4.41
294 295 6.072175 TGTGTTTGTTTAGTTGAAGAGTTGCT 60.072 34.615 0.00 0.00 0.00 3.91
295 296 6.090129 TGTGTTTGTTTAGTTGAAGAGTTGC 58.910 36.000 0.00 0.00 0.00 4.17
296 297 8.687824 AATGTGTTTGTTTAGTTGAAGAGTTG 57.312 30.769 0.00 0.00 0.00 3.16
297 298 9.783256 GTAATGTGTTTGTTTAGTTGAAGAGTT 57.217 29.630 0.00 0.00 0.00 3.01
298 299 9.174166 AGTAATGTGTTTGTTTAGTTGAAGAGT 57.826 29.630 0.00 0.00 0.00 3.24
300 301 9.781834 CAAGTAATGTGTTTGTTTAGTTGAAGA 57.218 29.630 0.00 0.00 37.99 2.87
301 302 9.019764 CCAAGTAATGTGTTTGTTTAGTTGAAG 57.980 33.333 9.80 0.00 37.99 3.02
302 303 7.976734 CCCAAGTAATGTGTTTGTTTAGTTGAA 59.023 33.333 9.80 0.00 37.99 2.69
303 304 7.484975 CCCAAGTAATGTGTTTGTTTAGTTGA 58.515 34.615 9.80 0.00 37.99 3.18
304 305 6.200097 GCCCAAGTAATGTGTTTGTTTAGTTG 59.800 38.462 0.00 0.00 36.60 3.16
305 306 6.277605 GCCCAAGTAATGTGTTTGTTTAGTT 58.722 36.000 0.00 0.00 0.00 2.24
306 307 5.221362 GGCCCAAGTAATGTGTTTGTTTAGT 60.221 40.000 0.00 0.00 0.00 2.24
307 308 5.227152 GGCCCAAGTAATGTGTTTGTTTAG 58.773 41.667 0.00 0.00 0.00 1.85
308 309 4.261656 CGGCCCAAGTAATGTGTTTGTTTA 60.262 41.667 0.00 0.00 0.00 2.01
309 310 3.491792 CGGCCCAAGTAATGTGTTTGTTT 60.492 43.478 0.00 0.00 0.00 2.83
310 311 2.035321 CGGCCCAAGTAATGTGTTTGTT 59.965 45.455 0.00 0.00 0.00 2.83
311 312 1.611491 CGGCCCAAGTAATGTGTTTGT 59.389 47.619 0.00 0.00 0.00 2.83
312 313 1.067915 CCGGCCCAAGTAATGTGTTTG 60.068 52.381 0.00 0.00 0.00 2.93
313 314 1.253100 CCGGCCCAAGTAATGTGTTT 58.747 50.000 0.00 0.00 0.00 2.83
314 315 1.248101 GCCGGCCCAAGTAATGTGTT 61.248 55.000 18.11 0.00 0.00 3.32
315 316 1.677633 GCCGGCCCAAGTAATGTGT 60.678 57.895 18.11 0.00 0.00 3.72
316 317 0.107410 TAGCCGGCCCAAGTAATGTG 60.107 55.000 26.15 0.00 0.00 3.21
317 318 0.843984 ATAGCCGGCCCAAGTAATGT 59.156 50.000 26.15 2.07 0.00 2.71
318 319 2.851263 TATAGCCGGCCCAAGTAATG 57.149 50.000 26.15 0.00 0.00 1.90
319 320 5.508280 TTTATATAGCCGGCCCAAGTAAT 57.492 39.130 26.15 9.91 0.00 1.89
320 321 4.978438 TTTATATAGCCGGCCCAAGTAA 57.022 40.909 26.15 13.43 0.00 2.24
321 322 4.505390 GGTTTTATATAGCCGGCCCAAGTA 60.505 45.833 26.15 9.14 0.00 2.24
322 323 3.483421 GTTTTATATAGCCGGCCCAAGT 58.517 45.455 26.15 6.59 0.00 3.16
323 324 2.817844 GGTTTTATATAGCCGGCCCAAG 59.182 50.000 26.15 0.00 0.00 3.61
324 325 2.489437 GGGTTTTATATAGCCGGCCCAA 60.489 50.000 26.15 9.94 35.15 4.12
325 326 1.074244 GGGTTTTATATAGCCGGCCCA 59.926 52.381 26.15 12.66 35.15 5.36
326 327 1.074244 TGGGTTTTATATAGCCGGCCC 59.926 52.381 26.15 13.80 35.94 5.80
327 328 2.555325 GTTGGGTTTTATATAGCCGGCC 59.445 50.000 26.15 5.07 35.94 6.13
328 329 2.555325 GGTTGGGTTTTATATAGCCGGC 59.445 50.000 21.89 21.89 35.94 6.13
329 330 2.809696 CGGTTGGGTTTTATATAGCCGG 59.190 50.000 0.00 0.00 35.94 6.13
330 331 2.224784 GCGGTTGGGTTTTATATAGCCG 59.775 50.000 0.00 0.00 39.63 5.52
331 332 3.215975 TGCGGTTGGGTTTTATATAGCC 58.784 45.455 0.00 0.00 0.00 3.93
332 333 4.131596 TCTGCGGTTGGGTTTTATATAGC 58.868 43.478 0.00 0.00 0.00 2.97
333 334 6.094325 TGTTTCTGCGGTTGGGTTTTATATAG 59.906 38.462 0.00 0.00 0.00 1.31
334 335 5.944599 TGTTTCTGCGGTTGGGTTTTATATA 59.055 36.000 0.00 0.00 0.00 0.86
335 336 4.767928 TGTTTCTGCGGTTGGGTTTTATAT 59.232 37.500 0.00 0.00 0.00 0.86
336 337 4.023021 GTGTTTCTGCGGTTGGGTTTTATA 60.023 41.667 0.00 0.00 0.00 0.98
337 338 2.959707 TGTTTCTGCGGTTGGGTTTTAT 59.040 40.909 0.00 0.00 0.00 1.40
338 339 2.099427 GTGTTTCTGCGGTTGGGTTTTA 59.901 45.455 0.00 0.00 0.00 1.52
339 340 1.134936 GTGTTTCTGCGGTTGGGTTTT 60.135 47.619 0.00 0.00 0.00 2.43
340 341 0.458260 GTGTTTCTGCGGTTGGGTTT 59.542 50.000 0.00 0.00 0.00 3.27
341 342 1.720694 CGTGTTTCTGCGGTTGGGTT 61.721 55.000 0.00 0.00 0.00 4.11
342 343 2.184167 CGTGTTTCTGCGGTTGGGT 61.184 57.895 0.00 0.00 0.00 4.51
343 344 1.440938 TTCGTGTTTCTGCGGTTGGG 61.441 55.000 0.00 0.00 0.00 4.12
344 345 0.316689 GTTCGTGTTTCTGCGGTTGG 60.317 55.000 0.00 0.00 0.00 3.77
345 346 0.316689 GGTTCGTGTTTCTGCGGTTG 60.317 55.000 0.00 0.00 0.00 3.77
346 347 1.441732 GGGTTCGTGTTTCTGCGGTT 61.442 55.000 0.00 0.00 0.00 4.44
347 348 1.890510 GGGTTCGTGTTTCTGCGGT 60.891 57.895 0.00 0.00 0.00 5.68
348 349 2.943653 GGGTTCGTGTTTCTGCGG 59.056 61.111 0.00 0.00 0.00 5.69
349 350 2.549282 CGGGTTCGTGTTTCTGCG 59.451 61.111 0.00 0.00 0.00 5.18
350 351 1.441732 AACCGGGTTCGTGTTTCTGC 61.442 55.000 6.59 0.00 33.95 4.26
351 352 1.868469 TAACCGGGTTCGTGTTTCTG 58.132 50.000 17.19 0.00 33.90 3.02
352 353 2.845363 ATAACCGGGTTCGTGTTTCT 57.155 45.000 17.19 0.00 33.90 2.52
353 354 4.213059 TGTTTATAACCGGGTTCGTGTTTC 59.787 41.667 17.19 3.47 33.90 2.78
354 355 4.133078 TGTTTATAACCGGGTTCGTGTTT 58.867 39.130 17.19 0.00 33.90 2.83
355 356 3.737850 TGTTTATAACCGGGTTCGTGTT 58.262 40.909 17.19 0.00 35.29 3.32
356 357 3.399440 TGTTTATAACCGGGTTCGTGT 57.601 42.857 17.19 4.12 33.95 4.49
357 358 4.392445 TCATTGTTTATAACCGGGTTCGTG 59.608 41.667 17.19 5.26 33.95 4.35
358 359 4.577875 TCATTGTTTATAACCGGGTTCGT 58.422 39.130 17.19 9.22 33.95 3.85
359 360 5.548706 TTCATTGTTTATAACCGGGTTCG 57.451 39.130 17.19 0.00 0.00 3.95
360 361 6.916440 AGTTTCATTGTTTATAACCGGGTTC 58.084 36.000 17.19 1.87 0.00 3.62
361 362 6.904463 AGTTTCATTGTTTATAACCGGGTT 57.096 33.333 17.83 17.83 0.00 4.11
362 363 6.094464 GCTAGTTTCATTGTTTATAACCGGGT 59.906 38.462 6.32 0.00 0.00 5.28
363 364 6.094325 TGCTAGTTTCATTGTTTATAACCGGG 59.906 38.462 6.32 0.00 0.00 5.73
364 365 6.964934 GTGCTAGTTTCATTGTTTATAACCGG 59.035 38.462 0.00 0.00 0.00 5.28
365 366 7.748847 AGTGCTAGTTTCATTGTTTATAACCG 58.251 34.615 0.00 0.00 0.00 4.44
366 367 9.908152 AAAGTGCTAGTTTCATTGTTTATAACC 57.092 29.630 0.00 0.00 0.00 2.85
370 371 8.860088 AGGAAAAGTGCTAGTTTCATTGTTTAT 58.140 29.630 6.05 0.00 35.80 1.40
371 372 8.232913 AGGAAAAGTGCTAGTTTCATTGTTTA 57.767 30.769 6.05 0.00 35.80 2.01
372 373 7.112452 AGGAAAAGTGCTAGTTTCATTGTTT 57.888 32.000 6.05 0.00 35.80 2.83
373 374 6.715347 AGGAAAAGTGCTAGTTTCATTGTT 57.285 33.333 6.05 0.00 35.80 2.83
374 375 8.299570 CAATAGGAAAAGTGCTAGTTTCATTGT 58.700 33.333 6.05 0.00 35.80 2.71
375 376 8.514594 TCAATAGGAAAAGTGCTAGTTTCATTG 58.485 33.333 6.05 7.57 35.80 2.82
376 377 8.635765 TCAATAGGAAAAGTGCTAGTTTCATT 57.364 30.769 6.05 0.00 35.80 2.57
377 378 8.635765 TTCAATAGGAAAAGTGCTAGTTTCAT 57.364 30.769 6.05 2.10 35.80 2.57
378 379 8.514594 CATTCAATAGGAAAAGTGCTAGTTTCA 58.485 33.333 6.05 0.00 39.39 2.69
379 380 8.730680 TCATTCAATAGGAAAAGTGCTAGTTTC 58.269 33.333 0.00 0.00 39.39 2.78
380 381 8.635765 TCATTCAATAGGAAAAGTGCTAGTTT 57.364 30.769 0.00 0.00 39.39 2.66
381 382 8.635765 TTCATTCAATAGGAAAAGTGCTAGTT 57.364 30.769 0.00 0.00 39.39 2.24
382 383 8.635765 TTTCATTCAATAGGAAAAGTGCTAGT 57.364 30.769 0.00 0.00 39.39 2.57
423 424 0.972471 ACTGCAGCTTTAATGCCCCC 60.972 55.000 15.27 0.22 43.18 5.40
424 425 0.897621 AACTGCAGCTTTAATGCCCC 59.102 50.000 15.27 2.47 43.18 5.80
425 426 1.545582 TGAACTGCAGCTTTAATGCCC 59.454 47.619 15.27 2.80 43.18 5.36
426 427 3.302365 TTGAACTGCAGCTTTAATGCC 57.698 42.857 15.27 0.00 43.18 4.40
427 428 4.687483 ACAATTGAACTGCAGCTTTAATGC 59.313 37.500 15.27 5.22 44.11 3.56
428 429 6.774354 AACAATTGAACTGCAGCTTTAATG 57.226 33.333 15.27 9.46 0.00 1.90
429 430 7.790823 AAAACAATTGAACTGCAGCTTTAAT 57.209 28.000 15.27 12.40 0.00 1.40
430 431 7.608308 AAAAACAATTGAACTGCAGCTTTAA 57.392 28.000 15.27 10.68 0.00 1.52
452 453 3.407698 TGAACTGCAGCGATCCTAAAAA 58.592 40.909 15.27 0.00 0.00 1.94
453 454 3.052455 TGAACTGCAGCGATCCTAAAA 57.948 42.857 15.27 0.00 0.00 1.52
454 455 2.760634 TGAACTGCAGCGATCCTAAA 57.239 45.000 15.27 0.00 0.00 1.85
455 456 2.760634 TTGAACTGCAGCGATCCTAA 57.239 45.000 15.27 0.00 0.00 2.69
456 457 2.988010 ATTGAACTGCAGCGATCCTA 57.012 45.000 15.27 1.78 0.00 2.94
457 458 2.119801 AATTGAACTGCAGCGATCCT 57.880 45.000 15.27 0.00 0.00 3.24
458 459 4.098416 GTTTAATTGAACTGCAGCGATCC 58.902 43.478 15.27 0.00 0.00 3.36
459 460 4.974591 AGTTTAATTGAACTGCAGCGATC 58.025 39.130 15.27 10.65 38.39 3.69
460 461 6.094048 ACATAGTTTAATTGAACTGCAGCGAT 59.906 34.615 22.15 6.87 39.99 4.58
461 462 5.411361 ACATAGTTTAATTGAACTGCAGCGA 59.589 36.000 22.15 4.94 39.99 4.93
462 463 5.631026 ACATAGTTTAATTGAACTGCAGCG 58.369 37.500 22.15 10.27 39.99 5.18
463 464 7.873739 AAACATAGTTTAATTGAACTGCAGC 57.126 32.000 22.15 0.00 39.99 5.25
514 515 2.027745 CCAGATATAAGCTCCATGGCGT 60.028 50.000 6.96 0.00 37.29 5.68
515 516 2.234661 TCCAGATATAAGCTCCATGGCG 59.765 50.000 6.96 0.71 37.29 5.69
521 522 2.260822 TGGGCTCCAGATATAAGCTCC 58.739 52.381 0.00 0.00 35.59 4.70
522 523 3.326297 ACTTGGGCTCCAGATATAAGCTC 59.674 47.826 0.00 0.00 37.03 4.09
526 527 2.224281 CGCACTTGGGCTCCAGATATAA 60.224 50.000 0.00 0.00 33.81 0.98
600 602 4.526970 TCTCAGATAAACTTGGGCATTCC 58.473 43.478 0.00 0.00 0.00 3.01
601 603 6.515272 TTTCTCAGATAAACTTGGGCATTC 57.485 37.500 0.00 0.00 0.00 2.67
602 604 6.438425 ACATTTCTCAGATAAACTTGGGCATT 59.562 34.615 0.00 0.00 0.00 3.56
603 605 5.954150 ACATTTCTCAGATAAACTTGGGCAT 59.046 36.000 0.00 0.00 0.00 4.40
605 607 5.183904 ACACATTTCTCAGATAAACTTGGGC 59.816 40.000 0.00 0.00 0.00 5.36
606 608 6.430925 TGACACATTTCTCAGATAAACTTGGG 59.569 38.462 0.00 0.00 0.00 4.12
607 609 7.439157 TGACACATTTCTCAGATAAACTTGG 57.561 36.000 0.00 0.00 0.00 3.61
608 610 8.724229 TCATGACACATTTCTCAGATAAACTTG 58.276 33.333 0.00 0.00 0.00 3.16
852 881 5.060506 TCTTTTGACCGCTTACATCTTTCA 58.939 37.500 0.00 0.00 0.00 2.69
853 882 5.607119 TCTTTTGACCGCTTACATCTTTC 57.393 39.130 0.00 0.00 0.00 2.62
856 885 5.940470 AGATTTCTTTTGACCGCTTACATCT 59.060 36.000 0.00 0.00 0.00 2.90
858 887 5.705441 TCAGATTTCTTTTGACCGCTTACAT 59.295 36.000 0.00 0.00 0.00 2.29
859 888 5.060506 TCAGATTTCTTTTGACCGCTTACA 58.939 37.500 0.00 0.00 0.00 2.41
860 889 5.408604 TCTCAGATTTCTTTTGACCGCTTAC 59.591 40.000 0.00 0.00 0.00 2.34
910 998 4.741185 CACACAATATATGGCATTGCACAC 59.259 41.667 4.78 0.00 36.96 3.82
945 1046 2.177654 GATGAAAACGTGCGGCCGAA 62.178 55.000 33.48 19.06 0.00 4.30
962 1073 5.771153 TGTGTCATTGTGTGATTTGTGAT 57.229 34.783 0.00 0.00 39.48 3.06
978 1089 1.268265 CGATTCGATCGCTTGTGTCA 58.732 50.000 11.09 0.00 46.55 3.58
991 1102 1.065764 TCACCTCCATCGCGATTCG 59.934 57.895 21.14 12.79 40.15 3.34
1119 1234 2.046892 TGGAAGAAGAGGCGCTGC 60.047 61.111 7.64 0.00 0.00 5.25
1486 1646 1.069204 CATCTTCATCCCATCGTCGGT 59.931 52.381 0.00 0.00 0.00 4.69
1493 1653 2.174210 CACACCTCCATCTTCATCCCAT 59.826 50.000 0.00 0.00 0.00 4.00
1494 1654 1.561076 CACACCTCCATCTTCATCCCA 59.439 52.381 0.00 0.00 0.00 4.37
1495 1655 1.748591 GCACACCTCCATCTTCATCCC 60.749 57.143 0.00 0.00 0.00 3.85
1593 1771 2.498481 CCACTTTACCTCCACCGACATA 59.502 50.000 0.00 0.00 0.00 2.29
1608 1786 2.597510 GTCTTGGCGCCCCACTTT 60.598 61.111 26.77 0.00 41.97 2.66
1632 1810 1.153489 CATGTCGCTCACCTCCAGG 60.153 63.158 0.00 0.00 42.17 4.45
1872 2054 1.815003 CGTTCGGAGCATGCATGGA 60.815 57.895 27.34 13.50 0.00 3.41
1873 2055 2.711311 CGTTCGGAGCATGCATGG 59.289 61.111 27.34 11.31 0.00 3.66
1887 2070 1.349688 TCTGTAAACCTGATGGGCGTT 59.650 47.619 0.00 0.00 39.10 4.84
1922 2110 6.735678 TGCAACATAATAACGACTCAATGT 57.264 33.333 0.00 0.00 0.00 2.71
1944 2132 4.277423 TGAAATGATGGAGTAGCATGCATG 59.723 41.667 22.70 22.70 35.16 4.06
1945 2133 4.466827 TGAAATGATGGAGTAGCATGCAT 58.533 39.130 21.98 4.95 35.16 3.96
1952 2148 7.978982 ACGAAAGAAATGAAATGATGGAGTAG 58.021 34.615 0.00 0.00 0.00 2.57
1982 2182 9.308000 AGGATCTTCAACATTACACCAATTTAA 57.692 29.630 0.00 0.00 0.00 1.52
1983 2183 8.877864 AGGATCTTCAACATTACACCAATTTA 57.122 30.769 0.00 0.00 0.00 1.40
2058 2300 3.703420 AGACGCATAGTTCGGTAACATC 58.297 45.455 0.00 0.00 38.12 3.06
2084 2330 2.712709 TCCGTTGATAATTGCCCGAAA 58.287 42.857 0.00 0.00 0.00 3.46
2114 2362 6.591935 AGAAAGTACAGATTGTTGGAGTTCA 58.408 36.000 0.00 0.00 0.00 3.18
2133 2381 2.858745 TCCTTCCGACCCAAAAGAAAG 58.141 47.619 0.00 0.00 0.00 2.62
2137 2385 2.561478 TCTTCCTTCCGACCCAAAAG 57.439 50.000 0.00 0.00 0.00 2.27
2163 2411 9.801873 GCACATTATTGTATTGTAAATGGAAGT 57.198 29.630 0.00 0.00 33.76 3.01
2164 2412 9.248291 GGCACATTATTGTATTGTAAATGGAAG 57.752 33.333 0.00 0.00 33.76 3.46
2167 2415 6.640499 CCGGCACATTATTGTATTGTAAATGG 59.360 38.462 0.00 0.00 33.76 3.16
2168 2416 7.199766 ACCGGCACATTATTGTATTGTAAATG 58.800 34.615 0.00 0.00 33.76 2.32
2169 2417 7.341445 ACCGGCACATTATTGTATTGTAAAT 57.659 32.000 0.00 0.00 33.76 1.40
2170 2418 6.761099 ACCGGCACATTATTGTATTGTAAA 57.239 33.333 0.00 0.00 33.76 2.01
2171 2419 7.049133 AGTACCGGCACATTATTGTATTGTAA 58.951 34.615 7.75 0.00 33.76 2.41
2172 2420 6.584488 AGTACCGGCACATTATTGTATTGTA 58.416 36.000 7.75 0.00 33.76 2.41
2173 2421 5.433526 AGTACCGGCACATTATTGTATTGT 58.566 37.500 7.75 0.00 33.76 2.71
2174 2422 6.371809 AAGTACCGGCACATTATTGTATTG 57.628 37.500 7.75 0.00 33.76 1.90
2175 2423 6.679392 GCAAAGTACCGGCACATTATTGTATT 60.679 38.462 7.75 0.00 33.76 1.89
2176 2424 5.220970 GCAAAGTACCGGCACATTATTGTAT 60.221 40.000 7.75 0.00 33.76 2.29
2216 2464 9.950496 ATGAGATTAAGAAAGAGAGCTTACAAA 57.050 29.630 0.00 0.00 32.98 2.83
2229 2477 8.560355 TCAATTTGACGGATGAGATTAAGAAA 57.440 30.769 0.00 0.00 0.00 2.52
2230 2478 8.737168 ATCAATTTGACGGATGAGATTAAGAA 57.263 30.769 0.15 0.00 0.00 2.52
2231 2479 7.986889 TGATCAATTTGACGGATGAGATTAAGA 59.013 33.333 0.15 0.00 0.00 2.10
2232 2480 8.146479 TGATCAATTTGACGGATGAGATTAAG 57.854 34.615 0.15 0.00 0.00 1.85
2233 2481 8.504812 TTGATCAATTTGACGGATGAGATTAA 57.495 30.769 3.38 0.00 0.00 1.40
2234 2482 7.227314 CCTTGATCAATTTGACGGATGAGATTA 59.773 37.037 8.96 0.00 0.00 1.75
2235 2483 6.039047 CCTTGATCAATTTGACGGATGAGATT 59.961 38.462 8.96 0.00 0.00 2.40
2236 2484 5.530171 CCTTGATCAATTTGACGGATGAGAT 59.470 40.000 8.96 0.00 0.00 2.75
2237 2485 4.877823 CCTTGATCAATTTGACGGATGAGA 59.122 41.667 8.96 0.00 0.00 3.27
2238 2486 4.637534 ACCTTGATCAATTTGACGGATGAG 59.362 41.667 8.96 0.00 0.00 2.90
2239 2487 4.588899 ACCTTGATCAATTTGACGGATGA 58.411 39.130 8.96 0.00 0.00 2.92
2240 2488 4.970662 ACCTTGATCAATTTGACGGATG 57.029 40.909 8.96 0.00 0.00 3.51
2241 2489 6.659242 AGTTTACCTTGATCAATTTGACGGAT 59.341 34.615 8.96 0.12 0.00 4.18
2242 2490 6.001460 AGTTTACCTTGATCAATTTGACGGA 58.999 36.000 8.96 0.00 0.00 4.69
2243 2491 6.086222 CAGTTTACCTTGATCAATTTGACGG 58.914 40.000 8.96 8.06 0.00 4.79
2244 2492 6.086222 CCAGTTTACCTTGATCAATTTGACG 58.914 40.000 8.96 0.00 0.00 4.35
2245 2493 6.389906 CCCAGTTTACCTTGATCAATTTGAC 58.610 40.000 8.96 5.01 0.00 3.18
2246 2494 5.480073 CCCCAGTTTACCTTGATCAATTTGA 59.520 40.000 8.96 0.75 0.00 2.69
2247 2495 5.245977 ACCCCAGTTTACCTTGATCAATTTG 59.754 40.000 8.96 3.54 0.00 2.32
2248 2496 5.402630 ACCCCAGTTTACCTTGATCAATTT 58.597 37.500 8.96 1.34 0.00 1.82
2249 2497 5.010708 ACCCCAGTTTACCTTGATCAATT 57.989 39.130 8.96 1.72 0.00 2.32
2250 2498 4.675063 ACCCCAGTTTACCTTGATCAAT 57.325 40.909 8.96 0.00 0.00 2.57
2251 2499 5.789574 ATACCCCAGTTTACCTTGATCAA 57.210 39.130 8.12 8.12 0.00 2.57
2252 2500 5.727279 TGTATACCCCAGTTTACCTTGATCA 59.273 40.000 0.00 0.00 31.53 2.92
2253 2501 6.243216 TGTATACCCCAGTTTACCTTGATC 57.757 41.667 0.00 0.00 31.53 2.92
2254 2502 6.645884 TTGTATACCCCAGTTTACCTTGAT 57.354 37.500 0.00 0.00 31.53 2.57
2255 2503 6.451292 TTTGTATACCCCAGTTTACCTTGA 57.549 37.500 0.00 0.00 31.53 3.02
2256 2504 8.050930 ACTATTTGTATACCCCAGTTTACCTTG 58.949 37.037 0.00 0.00 31.53 3.61
2257 2505 8.166479 ACTATTTGTATACCCCAGTTTACCTT 57.834 34.615 0.00 0.00 31.53 3.50
2258 2506 7.760400 ACTATTTGTATACCCCAGTTTACCT 57.240 36.000 0.00 0.00 31.53 3.08
2259 2507 8.708378 AGTACTATTTGTATACCCCAGTTTACC 58.292 37.037 0.00 0.00 31.53 2.85
2260 2508 9.755804 GAGTACTATTTGTATACCCCAGTTTAC 57.244 37.037 0.00 0.00 33.23 2.01
2261 2509 8.927411 GGAGTACTATTTGTATACCCCAGTTTA 58.073 37.037 0.00 0.00 33.23 2.01
2262 2510 7.147426 GGGAGTACTATTTGTATACCCCAGTTT 60.147 40.741 0.00 0.00 40.28 2.66
2263 2511 6.328410 GGGAGTACTATTTGTATACCCCAGTT 59.672 42.308 0.00 0.00 40.28 3.16
2264 2512 5.842874 GGGAGTACTATTTGTATACCCCAGT 59.157 44.000 0.00 1.64 40.28 4.00
2265 2513 6.082707 AGGGAGTACTATTTGTATACCCCAG 58.917 44.000 10.59 0.00 43.57 4.45
2266 2514 6.046917 AGGGAGTACTATTTGTATACCCCA 57.953 41.667 10.59 0.00 43.57 4.96
2267 2515 7.147426 ACAAAGGGAGTACTATTTGTATACCCC 60.147 40.741 22.30 13.62 42.41 4.95
2268 2516 7.799081 ACAAAGGGAGTACTATTTGTATACCC 58.201 38.462 22.30 14.20 42.41 3.69
2269 2517 9.676861 AAACAAAGGGAGTACTATTTGTATACC 57.323 33.333 23.21 7.93 43.17 2.73
2333 2581 4.260990 CCTGTTTTACATTTGAGACGTGCA 60.261 41.667 0.00 0.00 0.00 4.57
2557 2806 5.967088 TCGAAGAGAAGACTATTTTCCTGG 58.033 41.667 0.00 0.00 0.00 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.