Multiple sequence alignment - TraesCS5A01G021900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G021900 chr5A 100.000 2366 0 0 1 2366 17705144 17702779 0.000000e+00 4370
1 TraesCS5A01G021900 chr1A 92.894 1731 115 5 1 1725 561410360 561408632 0.000000e+00 2508
2 TraesCS5A01G021900 chr7A 92.779 1731 117 5 1 1725 395547072 395545344 0.000000e+00 2497
3 TraesCS5A01G021900 chr2A 92.824 1728 117 4 1 1724 511126980 511128704 0.000000e+00 2497
4 TraesCS5A01G021900 chr2A 92.992 371 24 2 1997 2366 154130488 154130857 7.440000e-150 540
5 TraesCS5A01G021900 chr2A 90.751 346 28 2 1380 1723 611111537 611111880 2.140000e-125 459
6 TraesCS5A01G021900 chr5B 92.366 1729 123 6 1 1724 485994837 485993113 0.000000e+00 2453
7 TraesCS5A01G021900 chr5B 94.231 364 19 2 2004 2366 700196215 700196577 2.660000e-154 555
8 TraesCS5A01G021900 chr5B 92.920 113 7 1 1787 1899 17922196 17922307 1.880000e-36 163
9 TraesCS5A01G021900 chr1B 90.909 1727 144 8 1 1723 300269111 300270828 0.000000e+00 2307
10 TraesCS5A01G021900 chr1B 93.767 369 20 2 1999 2366 417094029 417094395 3.440000e-153 551
11 TraesCS5A01G021900 chr7B 90.388 1727 148 9 1 1721 336807497 336809211 0.000000e+00 2254
12 TraesCS5A01G021900 chr3B 88.940 1727 181 8 1 1723 466645700 466647420 0.000000e+00 2122
13 TraesCS5A01G021900 chr3B 88.143 1729 196 7 1 1724 687742593 687740869 0.000000e+00 2049
14 TraesCS5A01G021900 chr3B 88.310 1497 162 9 1 1489 775078735 775077244 0.000000e+00 1783
15 TraesCS5A01G021900 chr3B 94.837 368 18 1 1999 2366 780286231 780286597 7.340000e-160 573
16 TraesCS5A01G021900 chr6B 94.293 368 19 2 1999 2365 137414025 137414391 1.590000e-156 562
17 TraesCS5A01G021900 chr2B 93.496 369 22 2 1999 2366 747860772 747861139 4.450000e-152 547
18 TraesCS5A01G021900 chr6D 92.228 386 28 2 1982 2366 449246428 449246812 1.600000e-151 545
19 TraesCS5A01G021900 chr4B 93.261 371 23 2 1997 2366 472071313 472070944 1.600000e-151 545
20 TraesCS5A01G021900 chr4A 93.496 369 21 2 1999 2366 708541312 708541678 1.600000e-151 545
21 TraesCS5A01G021900 chr5D 91.503 153 10 3 1787 1938 25036567 25036417 8.570000e-50 207


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G021900 chr5A 17702779 17705144 2365 True 4370 4370 100.000 1 2366 1 chr5A.!!$R1 2365
1 TraesCS5A01G021900 chr1A 561408632 561410360 1728 True 2508 2508 92.894 1 1725 1 chr1A.!!$R1 1724
2 TraesCS5A01G021900 chr7A 395545344 395547072 1728 True 2497 2497 92.779 1 1725 1 chr7A.!!$R1 1724
3 TraesCS5A01G021900 chr2A 511126980 511128704 1724 False 2497 2497 92.824 1 1724 1 chr2A.!!$F2 1723
4 TraesCS5A01G021900 chr5B 485993113 485994837 1724 True 2453 2453 92.366 1 1724 1 chr5B.!!$R1 1723
5 TraesCS5A01G021900 chr1B 300269111 300270828 1717 False 2307 2307 90.909 1 1723 1 chr1B.!!$F1 1722
6 TraesCS5A01G021900 chr7B 336807497 336809211 1714 False 2254 2254 90.388 1 1721 1 chr7B.!!$F1 1720
7 TraesCS5A01G021900 chr3B 466645700 466647420 1720 False 2122 2122 88.940 1 1723 1 chr3B.!!$F1 1722
8 TraesCS5A01G021900 chr3B 687740869 687742593 1724 True 2049 2049 88.143 1 1724 1 chr3B.!!$R1 1723
9 TraesCS5A01G021900 chr3B 775077244 775078735 1491 True 1783 1783 88.310 1 1489 1 chr3B.!!$R2 1488

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
390 391 1.923204 CAAGAAGTGATCCGAGCGAAG 59.077 52.381 0.0 0.0 0.0 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2346 2361 0.027979 ACGAAGACGAACGACGAACA 59.972 50.0 0.0 0.0 45.77 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
267 268 5.308825 GTCAAATGGACCAGGATATGTAGG 58.691 45.833 0.00 0.00 40.83 3.18
390 391 1.923204 CAAGAAGTGATCCGAGCGAAG 59.077 52.381 0.00 0.00 0.00 3.79
648 652 4.136341 TGGTGTAGGGGAAGACTTCTTA 57.864 45.455 14.72 3.43 36.11 2.10
897 902 3.435026 GGCAAACCTTCCAGGATGCTATA 60.435 47.826 18.31 0.00 44.83 1.31
1049 1054 1.344065 TGTGTTCTGGGTACGGACAT 58.656 50.000 0.00 0.00 0.00 3.06
1050 1055 1.274167 TGTGTTCTGGGTACGGACATC 59.726 52.381 0.00 0.00 0.00 3.06
1249 1255 3.290710 GGCTTCATCTCTTATTGGGCAA 58.709 45.455 0.00 0.00 0.00 4.52
1267 1273 1.482182 CAAGGATGATGACTGGGACGA 59.518 52.381 0.00 0.00 0.00 4.20
1293 1299 1.832167 GGCGATGGAGAGAGGAGCT 60.832 63.158 0.00 0.00 0.00 4.09
1318 1324 1.497223 GCTAAGAGCCAGCGCATCAG 61.497 60.000 11.47 0.00 34.48 2.90
1394 1407 2.743928 GTTGCCTGAGCTGGGTCG 60.744 66.667 0.00 0.00 40.80 4.79
1414 1428 6.037726 GGTCGTGTTAATTTTGTTTTGGTCT 58.962 36.000 0.00 0.00 0.00 3.85
1518 1532 8.426489 TGTAGTAAAACCTCGCTGGATATTATT 58.574 33.333 1.32 0.00 39.71 1.40
1520 1534 6.710744 AGTAAAACCTCGCTGGATATTATTGG 59.289 38.462 1.32 0.00 39.71 3.16
1547 1561 3.118920 GGCTAGTTTTGTGTTTGGGTGTT 60.119 43.478 0.00 0.00 0.00 3.32
1620 1634 2.214376 TTCCCAAGGATGCGTTGAAT 57.786 45.000 0.00 0.00 31.88 2.57
1658 1672 0.610174 CCTCCTTAGTGACTGCAGCA 59.390 55.000 15.27 10.30 0.00 4.41
1748 1763 7.934855 GGTGATGCCTTTATGATGATATTCT 57.065 36.000 0.00 0.00 0.00 2.40
1749 1764 8.345724 GGTGATGCCTTTATGATGATATTCTT 57.654 34.615 0.00 0.00 0.00 2.52
1750 1765 8.457261 GGTGATGCCTTTATGATGATATTCTTC 58.543 37.037 0.00 0.00 0.00 2.87
1751 1766 9.006839 GTGATGCCTTTATGATGATATTCTTCA 57.993 33.333 0.00 0.00 35.45 3.02
1752 1767 9.577222 TGATGCCTTTATGATGATATTCTTCAA 57.423 29.630 0.00 0.00 34.79 2.69
1753 1768 9.837525 GATGCCTTTATGATGATATTCTTCAAC 57.162 33.333 0.00 0.00 34.79 3.18
1754 1769 8.750515 TGCCTTTATGATGATATTCTTCAACA 57.249 30.769 0.00 0.00 34.79 3.33
1755 1770 9.358406 TGCCTTTATGATGATATTCTTCAACAT 57.642 29.630 3.30 3.30 40.75 2.71
1771 1786 9.796120 TTCTTCAACATTTATTGTTCTTTTCGT 57.204 25.926 0.00 0.00 45.55 3.85
1775 1790 9.658475 TCAACATTTATTGTTCTTTTCGTAGTG 57.342 29.630 0.00 0.00 45.55 2.74
1776 1791 9.658475 CAACATTTATTGTTCTTTTCGTAGTGA 57.342 29.630 0.00 0.00 45.55 3.41
1777 1792 9.878599 AACATTTATTGTTCTTTTCGTAGTGAG 57.121 29.630 0.00 0.00 45.55 3.51
1778 1793 8.015658 ACATTTATTGTTCTTTTCGTAGTGAGC 58.984 33.333 0.00 0.00 33.74 4.26
1779 1794 7.485418 TTTATTGTTCTTTTCGTAGTGAGCA 57.515 32.000 0.00 0.00 0.00 4.26
1780 1795 4.789095 TTGTTCTTTTCGTAGTGAGCAC 57.211 40.909 0.00 0.00 0.00 4.40
1781 1796 3.128349 TGTTCTTTTCGTAGTGAGCACC 58.872 45.455 0.00 0.00 0.00 5.01
1782 1797 3.181469 TGTTCTTTTCGTAGTGAGCACCT 60.181 43.478 0.00 0.00 0.00 4.00
1783 1798 3.299340 TCTTTTCGTAGTGAGCACCTC 57.701 47.619 0.00 0.00 0.00 3.85
1784 1799 1.986378 CTTTTCGTAGTGAGCACCTCG 59.014 52.381 0.00 3.26 32.35 4.63
1785 1800 1.241165 TTTCGTAGTGAGCACCTCGA 58.759 50.000 11.56 11.56 36.04 4.04
1786 1801 1.460504 TTCGTAGTGAGCACCTCGAT 58.539 50.000 14.71 0.00 37.03 3.59
1787 1802 1.015109 TCGTAGTGAGCACCTCGATC 58.985 55.000 11.56 0.00 34.16 3.69
1788 1803 0.316278 CGTAGTGAGCACCTCGATCG 60.316 60.000 9.36 9.36 32.35 3.69
1789 1804 0.733729 GTAGTGAGCACCTCGATCGT 59.266 55.000 15.94 0.00 32.35 3.73
1790 1805 1.132643 GTAGTGAGCACCTCGATCGTT 59.867 52.381 15.94 0.00 32.35 3.85
1791 1806 1.460504 AGTGAGCACCTCGATCGTTA 58.539 50.000 15.94 0.00 32.35 3.18
1792 1807 2.025155 AGTGAGCACCTCGATCGTTAT 58.975 47.619 15.94 0.00 32.35 1.89
1793 1808 2.120232 GTGAGCACCTCGATCGTTATG 58.880 52.381 15.94 12.24 32.35 1.90
1794 1809 1.749063 TGAGCACCTCGATCGTTATGT 59.251 47.619 15.94 5.45 32.35 2.29
1795 1810 2.165641 TGAGCACCTCGATCGTTATGTT 59.834 45.455 15.94 9.39 32.35 2.71
1796 1811 3.379057 TGAGCACCTCGATCGTTATGTTA 59.621 43.478 15.94 0.00 32.35 2.41
1797 1812 4.142337 TGAGCACCTCGATCGTTATGTTAA 60.142 41.667 15.94 0.38 32.35 2.01
1798 1813 4.110482 AGCACCTCGATCGTTATGTTAAC 58.890 43.478 15.94 0.00 0.00 2.01
1799 1814 3.244579 GCACCTCGATCGTTATGTTAACC 59.755 47.826 15.94 0.00 0.00 2.85
1800 1815 3.800506 CACCTCGATCGTTATGTTAACCC 59.199 47.826 15.94 0.00 0.00 4.11
1801 1816 3.448301 ACCTCGATCGTTATGTTAACCCA 59.552 43.478 15.94 0.00 0.00 4.51
1802 1817 4.049186 CCTCGATCGTTATGTTAACCCAG 58.951 47.826 15.94 0.00 0.00 4.45
1803 1818 4.202080 CCTCGATCGTTATGTTAACCCAGA 60.202 45.833 15.94 0.00 0.00 3.86
1804 1819 4.675510 TCGATCGTTATGTTAACCCAGAC 58.324 43.478 15.94 0.00 0.00 3.51
1805 1820 3.800506 CGATCGTTATGTTAACCCAGACC 59.199 47.826 7.03 0.00 0.00 3.85
1806 1821 4.678574 CGATCGTTATGTTAACCCAGACCA 60.679 45.833 7.03 0.00 0.00 4.02
1807 1822 3.929094 TCGTTATGTTAACCCAGACCAC 58.071 45.455 2.48 0.00 0.00 4.16
1808 1823 3.579586 TCGTTATGTTAACCCAGACCACT 59.420 43.478 2.48 0.00 0.00 4.00
1809 1824 3.930848 CGTTATGTTAACCCAGACCACTC 59.069 47.826 2.48 0.00 0.00 3.51
1810 1825 4.561938 CGTTATGTTAACCCAGACCACTCA 60.562 45.833 2.48 0.00 0.00 3.41
1811 1826 3.703001 ATGTTAACCCAGACCACTCAG 57.297 47.619 2.48 0.00 0.00 3.35
1812 1827 1.071699 TGTTAACCCAGACCACTCAGC 59.928 52.381 2.48 0.00 0.00 4.26
1813 1828 1.348036 GTTAACCCAGACCACTCAGCT 59.652 52.381 0.00 0.00 0.00 4.24
1814 1829 1.729586 TAACCCAGACCACTCAGCTT 58.270 50.000 0.00 0.00 0.00 3.74
1815 1830 0.846693 AACCCAGACCACTCAGCTTT 59.153 50.000 0.00 0.00 0.00 3.51
1816 1831 0.846693 ACCCAGACCACTCAGCTTTT 59.153 50.000 0.00 0.00 0.00 2.27
1817 1832 1.202818 ACCCAGACCACTCAGCTTTTC 60.203 52.381 0.00 0.00 0.00 2.29
1818 1833 1.151668 CCAGACCACTCAGCTTTTCG 58.848 55.000 0.00 0.00 0.00 3.46
1819 1834 1.541233 CCAGACCACTCAGCTTTTCGT 60.541 52.381 0.00 0.00 0.00 3.85
1820 1835 2.213499 CAGACCACTCAGCTTTTCGTT 58.787 47.619 0.00 0.00 0.00 3.85
1821 1836 2.614057 CAGACCACTCAGCTTTTCGTTT 59.386 45.455 0.00 0.00 0.00 3.60
1822 1837 3.065371 CAGACCACTCAGCTTTTCGTTTT 59.935 43.478 0.00 0.00 0.00 2.43
1823 1838 3.694566 AGACCACTCAGCTTTTCGTTTTT 59.305 39.130 0.00 0.00 0.00 1.94
1843 1858 5.593679 TTTTTGGGTCAAATGGAACGTAA 57.406 34.783 0.00 0.00 33.19 3.18
1844 1859 5.593679 TTTTGGGTCAAATGGAACGTAAA 57.406 34.783 0.00 0.00 33.19 2.01
1845 1860 5.793030 TTTGGGTCAAATGGAACGTAAAT 57.207 34.783 0.00 0.00 32.36 1.40
1846 1861 5.793030 TTGGGTCAAATGGAACGTAAATT 57.207 34.783 0.00 0.00 32.36 1.82
1847 1862 5.127693 TGGGTCAAATGGAACGTAAATTG 57.872 39.130 0.00 0.00 32.36 2.32
1848 1863 4.021894 TGGGTCAAATGGAACGTAAATTGG 60.022 41.667 0.00 0.00 32.36 3.16
1849 1864 4.218852 GGGTCAAATGGAACGTAAATTGGA 59.781 41.667 0.00 0.00 32.36 3.53
1850 1865 5.105513 GGGTCAAATGGAACGTAAATTGGAT 60.106 40.000 0.00 0.00 32.36 3.41
1851 1866 5.804979 GGTCAAATGGAACGTAAATTGGATG 59.195 40.000 0.00 0.00 0.00 3.51
1852 1867 6.349777 GGTCAAATGGAACGTAAATTGGATGA 60.350 38.462 0.00 0.00 0.00 2.92
1853 1868 6.526674 GTCAAATGGAACGTAAATTGGATGAC 59.473 38.462 0.00 0.00 0.00 3.06
1854 1869 6.207614 TCAAATGGAACGTAAATTGGATGACA 59.792 34.615 0.00 0.00 0.00 3.58
1855 1870 6.773976 AATGGAACGTAAATTGGATGACAT 57.226 33.333 0.00 0.00 0.00 3.06
1856 1871 5.811399 TGGAACGTAAATTGGATGACATC 57.189 39.130 6.91 6.91 0.00 3.06
1857 1872 5.249420 TGGAACGTAAATTGGATGACATCA 58.751 37.500 17.08 0.00 0.00 3.07
1858 1873 5.885352 TGGAACGTAAATTGGATGACATCAT 59.115 36.000 17.08 0.25 39.70 2.45
1859 1874 6.376864 TGGAACGTAAATTGGATGACATCATT 59.623 34.615 17.08 6.49 36.57 2.57
1860 1875 6.692681 GGAACGTAAATTGGATGACATCATTG 59.307 38.462 17.08 1.48 36.57 2.82
1861 1876 5.581605 ACGTAAATTGGATGACATCATTGC 58.418 37.500 17.08 8.56 36.57 3.56
1862 1877 5.357878 ACGTAAATTGGATGACATCATTGCT 59.642 36.000 17.08 1.47 36.57 3.91
1863 1878 5.684184 CGTAAATTGGATGACATCATTGCTG 59.316 40.000 17.08 0.44 36.57 4.41
1864 1879 5.925506 AAATTGGATGACATCATTGCTGA 57.074 34.783 17.08 0.00 36.57 4.26
1865 1880 5.925506 AATTGGATGACATCATTGCTGAA 57.074 34.783 17.08 0.00 36.57 3.02
1866 1881 6.479972 AATTGGATGACATCATTGCTGAAT 57.520 33.333 17.08 1.40 36.57 2.57
1867 1882 4.911514 TGGATGACATCATTGCTGAATG 57.088 40.909 17.08 0.00 40.47 2.67
1868 1883 4.274978 TGGATGACATCATTGCTGAATGT 58.725 39.130 17.08 0.00 40.09 2.71
1869 1884 5.438833 TGGATGACATCATTGCTGAATGTA 58.561 37.500 17.08 0.00 40.09 2.29
1870 1885 5.297527 TGGATGACATCATTGCTGAATGTAC 59.702 40.000 17.08 0.00 40.09 2.90
1871 1886 5.530171 GGATGACATCATTGCTGAATGTACT 59.470 40.000 17.08 0.00 40.09 2.73
1872 1887 6.039047 GGATGACATCATTGCTGAATGTACTT 59.961 38.462 17.08 0.00 40.09 2.24
1873 1888 6.822667 TGACATCATTGCTGAATGTACTTT 57.177 33.333 0.00 0.00 40.09 2.66
1874 1889 7.920160 TGACATCATTGCTGAATGTACTTTA 57.080 32.000 0.00 0.00 40.09 1.85
1875 1890 8.510243 TGACATCATTGCTGAATGTACTTTAT 57.490 30.769 0.00 0.00 40.09 1.40
1876 1891 8.959548 TGACATCATTGCTGAATGTACTTTATT 58.040 29.630 0.00 0.00 40.09 1.40
1877 1892 9.793252 GACATCATTGCTGAATGTACTTTATTT 57.207 29.630 0.00 0.00 40.09 1.40
1883 1898 8.519492 TTGCTGAATGTACTTTATTTTCTTGC 57.481 30.769 0.00 0.00 0.00 4.01
1884 1899 7.885297 TGCTGAATGTACTTTATTTTCTTGCT 58.115 30.769 0.00 0.00 0.00 3.91
1885 1900 7.809331 TGCTGAATGTACTTTATTTTCTTGCTG 59.191 33.333 0.00 0.00 0.00 4.41
1886 1901 7.201384 GCTGAATGTACTTTATTTTCTTGCTGC 60.201 37.037 0.00 0.00 0.00 5.25
1887 1902 7.885297 TGAATGTACTTTATTTTCTTGCTGCT 58.115 30.769 0.00 0.00 0.00 4.24
1888 1903 9.008965 TGAATGTACTTTATTTTCTTGCTGCTA 57.991 29.630 0.00 0.00 0.00 3.49
1889 1904 9.278734 GAATGTACTTTATTTTCTTGCTGCTAC 57.721 33.333 0.00 0.00 0.00 3.58
1890 1905 7.141100 TGTACTTTATTTTCTTGCTGCTACC 57.859 36.000 0.00 0.00 0.00 3.18
1891 1906 5.296813 ACTTTATTTTCTTGCTGCTACCG 57.703 39.130 0.00 0.00 0.00 4.02
1892 1907 5.001232 ACTTTATTTTCTTGCTGCTACCGA 58.999 37.500 0.00 0.00 0.00 4.69
1893 1908 5.472137 ACTTTATTTTCTTGCTGCTACCGAA 59.528 36.000 0.00 0.00 0.00 4.30
1894 1909 3.831715 ATTTTCTTGCTGCTACCGAAC 57.168 42.857 0.00 0.00 0.00 3.95
1895 1910 2.248280 TTTCTTGCTGCTACCGAACA 57.752 45.000 0.00 0.00 0.00 3.18
1896 1911 2.472695 TTCTTGCTGCTACCGAACAT 57.527 45.000 0.00 0.00 0.00 2.71
1897 1912 3.603158 TTCTTGCTGCTACCGAACATA 57.397 42.857 0.00 0.00 0.00 2.29
1898 1913 3.819564 TCTTGCTGCTACCGAACATAT 57.180 42.857 0.00 0.00 0.00 1.78
1899 1914 3.457234 TCTTGCTGCTACCGAACATATG 58.543 45.455 0.00 0.00 0.00 1.78
1900 1915 2.979814 TGCTGCTACCGAACATATGT 57.020 45.000 1.41 1.41 0.00 2.29
1901 1916 3.260475 TGCTGCTACCGAACATATGTT 57.740 42.857 20.93 20.93 41.64 2.71
1902 1917 4.394439 TGCTGCTACCGAACATATGTTA 57.606 40.909 20.83 4.91 38.56 2.41
1903 1918 4.116961 TGCTGCTACCGAACATATGTTAC 58.883 43.478 20.83 13.05 38.56 2.50
1904 1919 3.493503 GCTGCTACCGAACATATGTTACC 59.506 47.826 20.83 8.94 38.56 2.85
1905 1920 3.708890 TGCTACCGAACATATGTTACCG 58.291 45.455 20.83 19.22 38.56 4.02
1906 1921 3.380954 TGCTACCGAACATATGTTACCGA 59.619 43.478 23.74 10.47 38.56 4.69
1907 1922 4.142204 TGCTACCGAACATATGTTACCGAA 60.142 41.667 23.74 13.98 38.56 4.30
1908 1923 4.443394 GCTACCGAACATATGTTACCGAAG 59.557 45.833 23.74 20.41 38.56 3.79
1909 1924 4.724074 ACCGAACATATGTTACCGAAGA 57.276 40.909 23.74 0.00 38.56 2.87
1910 1925 5.075858 ACCGAACATATGTTACCGAAGAA 57.924 39.130 23.74 0.00 38.56 2.52
1911 1926 5.481105 ACCGAACATATGTTACCGAAGAAA 58.519 37.500 23.74 0.00 38.56 2.52
1912 1927 6.110707 ACCGAACATATGTTACCGAAGAAAT 58.889 36.000 23.74 0.38 38.56 2.17
1913 1928 6.596497 ACCGAACATATGTTACCGAAGAAATT 59.404 34.615 23.74 0.19 38.56 1.82
1914 1929 7.120138 ACCGAACATATGTTACCGAAGAAATTT 59.880 33.333 23.74 0.00 38.56 1.82
1915 1930 7.638683 CCGAACATATGTTACCGAAGAAATTTC 59.361 37.037 23.74 10.33 38.56 2.17
1916 1931 8.172484 CGAACATATGTTACCGAAGAAATTTCA 58.828 33.333 20.83 0.00 38.56 2.69
1918 1933 9.787532 AACATATGTTACCGAAGAAATTTCATG 57.212 29.630 19.51 11.76 36.32 3.07
1919 1934 7.915397 ACATATGTTACCGAAGAAATTTCATGC 59.085 33.333 19.99 7.74 0.00 4.06
1920 1935 5.054390 TGTTACCGAAGAAATTTCATGCC 57.946 39.130 19.99 5.26 0.00 4.40
1921 1936 4.082463 TGTTACCGAAGAAATTTCATGCCC 60.082 41.667 19.99 3.66 0.00 5.36
1922 1937 1.824852 ACCGAAGAAATTTCATGCCCC 59.175 47.619 19.99 2.09 0.00 5.80
1923 1938 1.824230 CCGAAGAAATTTCATGCCCCA 59.176 47.619 19.99 0.00 0.00 4.96
1924 1939 2.233431 CCGAAGAAATTTCATGCCCCAA 59.767 45.455 19.99 0.00 0.00 4.12
1925 1940 3.253230 CGAAGAAATTTCATGCCCCAAC 58.747 45.455 19.99 0.00 0.00 3.77
1926 1941 3.056607 CGAAGAAATTTCATGCCCCAACT 60.057 43.478 19.99 0.00 0.00 3.16
1927 1942 4.498241 GAAGAAATTTCATGCCCCAACTC 58.502 43.478 19.99 0.00 0.00 3.01
1928 1943 2.833943 AGAAATTTCATGCCCCAACTCC 59.166 45.455 19.99 0.00 0.00 3.85
1929 1944 1.571955 AATTTCATGCCCCAACTCCC 58.428 50.000 0.00 0.00 0.00 4.30
1930 1945 0.413037 ATTTCATGCCCCAACTCCCA 59.587 50.000 0.00 0.00 0.00 4.37
1931 1946 0.251742 TTTCATGCCCCAACTCCCAG 60.252 55.000 0.00 0.00 0.00 4.45
1932 1947 1.139498 TTCATGCCCCAACTCCCAGA 61.139 55.000 0.00 0.00 0.00 3.86
1933 1948 0.920763 TCATGCCCCAACTCCCAGAT 60.921 55.000 0.00 0.00 0.00 2.90
1934 1949 0.032813 CATGCCCCAACTCCCAGATT 60.033 55.000 0.00 0.00 0.00 2.40
1935 1950 1.215173 CATGCCCCAACTCCCAGATTA 59.785 52.381 0.00 0.00 0.00 1.75
1936 1951 1.377690 TGCCCCAACTCCCAGATTAA 58.622 50.000 0.00 0.00 0.00 1.40
1937 1952 1.713647 TGCCCCAACTCCCAGATTAAA 59.286 47.619 0.00 0.00 0.00 1.52
1938 1953 2.100197 GCCCCAACTCCCAGATTAAAC 58.900 52.381 0.00 0.00 0.00 2.01
1939 1954 2.365582 CCCCAACTCCCAGATTAAACG 58.634 52.381 0.00 0.00 0.00 3.60
1940 1955 2.026636 CCCCAACTCCCAGATTAAACGA 60.027 50.000 0.00 0.00 0.00 3.85
1941 1956 3.560453 CCCCAACTCCCAGATTAAACGAA 60.560 47.826 0.00 0.00 0.00 3.85
1942 1957 4.076394 CCCAACTCCCAGATTAAACGAAA 58.924 43.478 0.00 0.00 0.00 3.46
1943 1958 4.521256 CCCAACTCCCAGATTAAACGAAAA 59.479 41.667 0.00 0.00 0.00 2.29
1944 1959 5.185056 CCCAACTCCCAGATTAAACGAAAAT 59.815 40.000 0.00 0.00 0.00 1.82
1945 1960 6.092748 CCAACTCCCAGATTAAACGAAAATG 58.907 40.000 0.00 0.00 0.00 2.32
1946 1961 6.072175 CCAACTCCCAGATTAAACGAAAATGA 60.072 38.462 0.00 0.00 0.00 2.57
1947 1962 6.743575 ACTCCCAGATTAAACGAAAATGAG 57.256 37.500 0.00 0.00 0.00 2.90
1948 1963 6.472887 ACTCCCAGATTAAACGAAAATGAGA 58.527 36.000 0.00 0.00 0.00 3.27
1949 1964 7.112779 ACTCCCAGATTAAACGAAAATGAGAT 58.887 34.615 0.00 0.00 0.00 2.75
1950 1965 7.281100 ACTCCCAGATTAAACGAAAATGAGATC 59.719 37.037 0.00 0.00 0.00 2.75
1951 1966 7.109501 TCCCAGATTAAACGAAAATGAGATCA 58.890 34.615 0.00 0.00 0.00 2.92
1952 1967 7.609918 TCCCAGATTAAACGAAAATGAGATCAA 59.390 33.333 0.00 0.00 0.00 2.57
1953 1968 8.408601 CCCAGATTAAACGAAAATGAGATCAAT 58.591 33.333 0.00 0.00 0.00 2.57
1970 1985 8.896744 TGAGATCAATACAATAAAAAGCTCAGG 58.103 33.333 0.00 0.00 0.00 3.86
1971 1986 9.113838 GAGATCAATACAATAAAAAGCTCAGGA 57.886 33.333 0.00 0.00 0.00 3.86
1972 1987 9.118300 AGATCAATACAATAAAAAGCTCAGGAG 57.882 33.333 0.00 0.00 0.00 3.69
1982 1997 2.979130 GCTCAGGAGCGGATGTAAC 58.021 57.895 5.41 0.00 45.29 2.50
1983 1998 0.872021 GCTCAGGAGCGGATGTAACG 60.872 60.000 5.41 0.00 45.29 3.18
1984 1999 0.738975 CTCAGGAGCGGATGTAACGA 59.261 55.000 0.00 0.00 0.00 3.85
1985 2000 1.338337 CTCAGGAGCGGATGTAACGAT 59.662 52.381 0.00 0.00 0.00 3.73
1986 2001 2.552743 CTCAGGAGCGGATGTAACGATA 59.447 50.000 0.00 0.00 0.00 2.92
1987 2002 3.154710 TCAGGAGCGGATGTAACGATAT 58.845 45.455 0.00 0.00 0.00 1.63
1988 2003 3.572682 TCAGGAGCGGATGTAACGATATT 59.427 43.478 0.00 0.00 0.00 1.28
1989 2004 3.675225 CAGGAGCGGATGTAACGATATTG 59.325 47.826 0.00 0.00 0.00 1.90
1990 2005 3.321111 AGGAGCGGATGTAACGATATTGT 59.679 43.478 0.00 0.00 0.00 2.71
1991 2006 4.056050 GGAGCGGATGTAACGATATTGTT 58.944 43.478 12.95 12.95 35.86 2.83
1992 2007 5.010314 AGGAGCGGATGTAACGATATTGTTA 59.990 40.000 10.95 10.95 33.32 2.41
1993 2008 5.693104 GGAGCGGATGTAACGATATTGTTAA 59.307 40.000 15.73 8.16 36.17 2.01
1994 2009 6.128902 GGAGCGGATGTAACGATATTGTTAAG 60.129 42.308 15.73 7.72 36.17 1.85
1995 2010 5.694910 AGCGGATGTAACGATATTGTTAAGG 59.305 40.000 15.73 6.39 36.17 2.69
1996 2011 5.693104 GCGGATGTAACGATATTGTTAAGGA 59.307 40.000 15.73 5.35 36.17 3.36
1997 2012 6.201425 GCGGATGTAACGATATTGTTAAGGAA 59.799 38.462 15.73 4.72 36.17 3.36
1998 2013 7.561556 CGGATGTAACGATATTGTTAAGGAAC 58.438 38.462 15.73 7.70 36.17 3.62
1999 2014 7.561556 GGATGTAACGATATTGTTAAGGAACG 58.438 38.462 15.73 0.00 38.51 3.95
2000 2015 7.223387 GGATGTAACGATATTGTTAAGGAACGT 59.777 37.037 15.73 8.25 38.51 3.99
2001 2016 7.280730 TGTAACGATATTGTTAAGGAACGTG 57.719 36.000 15.73 0.00 38.51 4.49
2002 2017 4.852609 ACGATATTGTTAAGGAACGTGC 57.147 40.909 0.00 0.00 38.51 5.34
2003 2018 3.619929 ACGATATTGTTAAGGAACGTGCC 59.380 43.478 3.55 3.55 38.51 5.01
2004 2019 3.001939 CGATATTGTTAAGGAACGTGCCC 59.998 47.826 9.68 3.73 38.51 5.36
2005 2020 2.279935 ATTGTTAAGGAACGTGCCCA 57.720 45.000 9.68 0.00 38.51 5.36
2006 2021 1.600023 TTGTTAAGGAACGTGCCCAG 58.400 50.000 9.68 0.00 38.51 4.45
2007 2022 0.887387 TGTTAAGGAACGTGCCCAGC 60.887 55.000 9.68 0.00 38.51 4.85
2008 2023 1.302993 TTAAGGAACGTGCCCAGCC 60.303 57.895 9.68 0.00 0.00 4.85
2009 2024 2.058125 TTAAGGAACGTGCCCAGCCA 62.058 55.000 9.68 0.00 0.00 4.75
2010 2025 2.741486 TAAGGAACGTGCCCAGCCAC 62.741 60.000 9.68 0.00 0.00 5.01
2023 2038 4.382320 GCCACCGCCTCCAACGTA 62.382 66.667 0.00 0.00 0.00 3.57
2024 2039 2.125673 CCACCGCCTCCAACGTAG 60.126 66.667 0.00 0.00 0.00 3.51
2025 2040 2.813908 CACCGCCTCCAACGTAGC 60.814 66.667 0.00 0.00 0.00 3.58
2026 2041 2.995574 ACCGCCTCCAACGTAGCT 60.996 61.111 0.00 0.00 0.00 3.32
2027 2042 1.679977 ACCGCCTCCAACGTAGCTA 60.680 57.895 0.00 0.00 0.00 3.32
2028 2043 1.065928 CCGCCTCCAACGTAGCTAG 59.934 63.158 0.00 0.00 0.00 3.42
2029 2044 1.589196 CGCCTCCAACGTAGCTAGC 60.589 63.158 6.62 6.62 0.00 3.42
2030 2045 1.227292 GCCTCCAACGTAGCTAGCC 60.227 63.158 12.13 0.00 0.00 3.93
2031 2046 1.065928 CCTCCAACGTAGCTAGCCG 59.934 63.158 12.13 11.60 0.00 5.52
2032 2047 1.589196 CTCCAACGTAGCTAGCCGC 60.589 63.158 12.13 3.38 39.57 6.53
2033 2048 2.585247 CCAACGTAGCTAGCCGCC 60.585 66.667 12.13 0.00 40.39 6.13
2034 2049 2.954868 CAACGTAGCTAGCCGCCG 60.955 66.667 12.13 13.57 40.39 6.46
2035 2050 4.867599 AACGTAGCTAGCCGCCGC 62.868 66.667 12.13 0.00 40.39 6.53
2038 2053 4.222847 GTAGCTAGCCGCCGCCTT 62.223 66.667 12.13 0.00 40.39 4.35
2039 2054 3.912907 TAGCTAGCCGCCGCCTTC 61.913 66.667 12.13 0.00 40.39 3.46
2046 2061 4.050934 CCGCCGCCTTCCCAAAAC 62.051 66.667 0.00 0.00 0.00 2.43
2047 2062 2.983592 CGCCGCCTTCCCAAAACT 60.984 61.111 0.00 0.00 0.00 2.66
2048 2063 1.673009 CGCCGCCTTCCCAAAACTA 60.673 57.895 0.00 0.00 0.00 2.24
2049 2064 1.644786 CGCCGCCTTCCCAAAACTAG 61.645 60.000 0.00 0.00 0.00 2.57
2050 2065 1.313091 GCCGCCTTCCCAAAACTAGG 61.313 60.000 0.00 0.00 0.00 3.02
2051 2066 0.326927 CCGCCTTCCCAAAACTAGGA 59.673 55.000 0.00 0.00 0.00 2.94
2052 2067 1.064685 CCGCCTTCCCAAAACTAGGAT 60.065 52.381 0.00 0.00 30.55 3.24
2053 2068 2.620627 CCGCCTTCCCAAAACTAGGATT 60.621 50.000 0.00 0.00 30.55 3.01
2054 2069 2.683362 CGCCTTCCCAAAACTAGGATTC 59.317 50.000 0.00 0.00 30.55 2.52
2055 2070 3.622455 CGCCTTCCCAAAACTAGGATTCT 60.622 47.826 0.00 0.00 30.55 2.40
2056 2071 4.344978 GCCTTCCCAAAACTAGGATTCTT 58.655 43.478 0.00 0.00 30.55 2.52
2057 2072 4.772624 GCCTTCCCAAAACTAGGATTCTTT 59.227 41.667 0.00 0.00 30.55 2.52
2058 2073 5.336770 GCCTTCCCAAAACTAGGATTCTTTG 60.337 44.000 0.00 0.00 30.55 2.77
2059 2074 5.336770 CCTTCCCAAAACTAGGATTCTTTGC 60.337 44.000 0.00 0.00 30.55 3.68
2060 2075 4.086457 TCCCAAAACTAGGATTCTTTGCC 58.914 43.478 0.00 0.00 0.00 4.52
2061 2076 4.089361 CCCAAAACTAGGATTCTTTGCCT 58.911 43.478 0.00 0.00 38.31 4.75
2062 2077 4.158579 CCCAAAACTAGGATTCTTTGCCTC 59.841 45.833 0.00 0.00 35.73 4.70
2063 2078 4.158579 CCAAAACTAGGATTCTTTGCCTCC 59.841 45.833 0.00 0.00 35.73 4.30
2064 2079 3.653835 AACTAGGATTCTTTGCCTCCC 57.346 47.619 0.00 0.00 35.73 4.30
2065 2080 2.562296 ACTAGGATTCTTTGCCTCCCA 58.438 47.619 0.00 0.00 35.73 4.37
2066 2081 2.239907 ACTAGGATTCTTTGCCTCCCAC 59.760 50.000 0.00 0.00 35.73 4.61
2067 2082 0.332972 AGGATTCTTTGCCTCCCACC 59.667 55.000 0.00 0.00 0.00 4.61
2068 2083 1.032114 GGATTCTTTGCCTCCCACCG 61.032 60.000 0.00 0.00 0.00 4.94
2069 2084 1.000896 ATTCTTTGCCTCCCACCGG 60.001 57.895 0.00 0.00 0.00 5.28
2106 2121 2.494918 CGTCTCCGGTGGCCTTAG 59.505 66.667 3.32 0.00 0.00 2.18
2107 2122 2.901042 GTCTCCGGTGGCCTTAGG 59.099 66.667 3.32 4.25 0.00 2.69
2108 2123 2.365105 TCTCCGGTGGCCTTAGGG 60.365 66.667 3.32 0.00 0.00 3.53
2126 2141 3.083349 CCATGGAGGCGGAGTGGA 61.083 66.667 5.56 0.00 31.59 4.02
2127 2142 2.446848 CCATGGAGGCGGAGTGGAT 61.447 63.158 5.56 0.00 31.59 3.41
2128 2143 1.070445 CATGGAGGCGGAGTGGATC 59.930 63.158 0.00 0.00 0.00 3.36
2129 2144 1.074926 ATGGAGGCGGAGTGGATCT 60.075 57.895 0.00 0.00 0.00 2.75
2130 2145 1.118356 ATGGAGGCGGAGTGGATCTC 61.118 60.000 0.00 0.00 42.07 2.75
2131 2146 2.725008 GAGGCGGAGTGGATCTCG 59.275 66.667 0.00 0.00 43.60 4.04
2132 2147 2.835431 AGGCGGAGTGGATCTCGG 60.835 66.667 0.00 0.00 43.60 4.63
2135 2150 3.917760 CGGAGTGGATCTCGGCCC 61.918 72.222 0.00 0.00 43.60 5.80
2136 2151 2.444895 GGAGTGGATCTCGGCCCT 60.445 66.667 0.00 0.00 43.60 5.19
2137 2152 2.066999 GGAGTGGATCTCGGCCCTT 61.067 63.158 0.00 0.00 43.60 3.95
2138 2153 1.144936 GAGTGGATCTCGGCCCTTG 59.855 63.158 0.00 0.00 33.25 3.61
2139 2154 2.514824 GTGGATCTCGGCCCTTGC 60.515 66.667 0.00 0.00 0.00 4.01
2162 2177 2.592308 GGAGGGCTCCGCTTTCAT 59.408 61.111 0.00 0.00 40.36 2.57
2163 2178 1.830145 GGAGGGCTCCGCTTTCATA 59.170 57.895 0.00 0.00 40.36 2.15
2164 2179 0.398318 GGAGGGCTCCGCTTTCATAT 59.602 55.000 0.00 0.00 40.36 1.78
2165 2180 1.202818 GGAGGGCTCCGCTTTCATATT 60.203 52.381 0.00 0.00 40.36 1.28
2166 2181 2.576615 GAGGGCTCCGCTTTCATATTT 58.423 47.619 0.00 0.00 0.00 1.40
2167 2182 2.952310 GAGGGCTCCGCTTTCATATTTT 59.048 45.455 0.00 0.00 0.00 1.82
2168 2183 3.365472 AGGGCTCCGCTTTCATATTTTT 58.635 40.909 0.00 0.00 0.00 1.94
2196 2211 7.618502 AAAAATTTTGTTAGGGTTTGTGTCC 57.381 32.000 3.73 0.00 0.00 4.02
2197 2212 6.553953 AAATTTTGTTAGGGTTTGTGTCCT 57.446 33.333 0.00 0.00 37.18 3.85
2198 2213 4.993029 TTTTGTTAGGGTTTGTGTCCTG 57.007 40.909 0.00 0.00 34.75 3.86
2199 2214 1.975660 TGTTAGGGTTTGTGTCCTGC 58.024 50.000 0.00 0.00 34.75 4.85
2200 2215 1.493022 TGTTAGGGTTTGTGTCCTGCT 59.507 47.619 0.00 0.00 34.75 4.24
2201 2216 2.152016 GTTAGGGTTTGTGTCCTGCTC 58.848 52.381 0.00 0.00 34.75 4.26
2202 2217 1.429930 TAGGGTTTGTGTCCTGCTCA 58.570 50.000 0.00 0.00 34.75 4.26
2203 2218 0.109342 AGGGTTTGTGTCCTGCTCAG 59.891 55.000 0.00 0.00 31.11 3.35
2213 2228 3.292656 CTGCTCAGGAAGGCGAGA 58.707 61.111 0.00 0.00 0.00 4.04
2214 2229 1.153667 CTGCTCAGGAAGGCGAGAC 60.154 63.158 0.00 0.00 0.00 3.36
2215 2230 2.202676 GCTCAGGAAGGCGAGACG 60.203 66.667 0.00 0.00 0.00 4.18
2216 2231 2.492090 CTCAGGAAGGCGAGACGG 59.508 66.667 0.00 0.00 0.00 4.79
2233 2248 4.135153 GCGGCGGCTCTCTGAAGA 62.135 66.667 9.78 0.00 35.83 2.87
2234 2249 2.811101 CGGCGGCTCTCTGAAGAT 59.189 61.111 7.61 0.00 0.00 2.40
2235 2250 1.591059 CGGCGGCTCTCTGAAGATG 60.591 63.158 7.61 0.00 0.00 2.90
2236 2251 1.227497 GGCGGCTCTCTGAAGATGG 60.227 63.158 0.00 0.00 0.00 3.51
2237 2252 1.680522 GGCGGCTCTCTGAAGATGGA 61.681 60.000 0.00 0.00 0.00 3.41
2238 2253 0.176680 GCGGCTCTCTGAAGATGGAA 59.823 55.000 0.00 0.00 0.00 3.53
2239 2254 1.202627 GCGGCTCTCTGAAGATGGAAT 60.203 52.381 0.00 0.00 0.00 3.01
2240 2255 2.036475 GCGGCTCTCTGAAGATGGAATA 59.964 50.000 0.00 0.00 0.00 1.75
2241 2256 3.493350 GCGGCTCTCTGAAGATGGAATAA 60.493 47.826 0.00 0.00 0.00 1.40
2242 2257 4.697514 CGGCTCTCTGAAGATGGAATAAA 58.302 43.478 0.00 0.00 0.00 1.40
2243 2258 4.749099 CGGCTCTCTGAAGATGGAATAAAG 59.251 45.833 0.00 0.00 0.00 1.85
2244 2259 5.062528 GGCTCTCTGAAGATGGAATAAAGG 58.937 45.833 0.00 0.00 0.00 3.11
2245 2260 5.397334 GGCTCTCTGAAGATGGAATAAAGGT 60.397 44.000 0.00 0.00 0.00 3.50
2246 2261 5.757808 GCTCTCTGAAGATGGAATAAAGGTC 59.242 44.000 0.00 0.00 0.00 3.85
2247 2262 6.407979 GCTCTCTGAAGATGGAATAAAGGTCT 60.408 42.308 0.00 0.00 0.00 3.85
2248 2263 7.118496 TCTCTGAAGATGGAATAAAGGTCTC 57.882 40.000 0.00 0.00 0.00 3.36
2249 2264 6.098982 TCTCTGAAGATGGAATAAAGGTCTCC 59.901 42.308 0.00 0.00 0.00 3.71
2250 2265 5.131142 TCTGAAGATGGAATAAAGGTCTCCC 59.869 44.000 0.00 0.00 0.00 4.30
2251 2266 4.141711 TGAAGATGGAATAAAGGTCTCCCG 60.142 45.833 0.00 0.00 35.12 5.14
2252 2267 3.385115 AGATGGAATAAAGGTCTCCCGT 58.615 45.455 0.00 0.00 35.12 5.28
2253 2268 3.388350 AGATGGAATAAAGGTCTCCCGTC 59.612 47.826 0.00 0.00 35.12 4.79
2254 2269 2.829023 TGGAATAAAGGTCTCCCGTCT 58.171 47.619 0.00 0.00 35.12 4.18
2255 2270 3.985127 TGGAATAAAGGTCTCCCGTCTA 58.015 45.455 0.00 0.00 35.12 2.59
2256 2271 3.958798 TGGAATAAAGGTCTCCCGTCTAG 59.041 47.826 0.00 0.00 35.12 2.43
2257 2272 3.959449 GGAATAAAGGTCTCCCGTCTAGT 59.041 47.826 0.00 0.00 35.12 2.57
2258 2273 4.037803 GGAATAAAGGTCTCCCGTCTAGTC 59.962 50.000 0.00 0.00 35.12 2.59
2259 2274 1.849977 AAAGGTCTCCCGTCTAGTCC 58.150 55.000 0.00 0.00 35.12 3.85
2260 2275 0.033306 AAGGTCTCCCGTCTAGTCCC 60.033 60.000 0.00 0.00 35.12 4.46
2261 2276 1.455402 GGTCTCCCGTCTAGTCCCC 60.455 68.421 0.00 0.00 0.00 4.81
2262 2277 1.823041 GTCTCCCGTCTAGTCCCCG 60.823 68.421 0.00 0.00 0.00 5.73
2263 2278 2.274760 CTCCCGTCTAGTCCCCGT 59.725 66.667 0.00 0.00 0.00 5.28
2264 2279 1.379576 CTCCCGTCTAGTCCCCGTT 60.380 63.158 0.00 0.00 0.00 4.44
2265 2280 1.379044 TCCCGTCTAGTCCCCGTTC 60.379 63.158 0.00 0.00 0.00 3.95
2266 2281 2.421399 CCCGTCTAGTCCCCGTTCC 61.421 68.421 0.00 0.00 0.00 3.62
2267 2282 2.768492 CCGTCTAGTCCCCGTTCCG 61.768 68.421 0.00 0.00 0.00 4.30
2277 2292 3.573558 CCGTTCCGGGAATGTGTG 58.426 61.111 23.71 8.42 44.15 3.82
2278 2293 1.302192 CCGTTCCGGGAATGTGTGT 60.302 57.895 23.71 0.00 44.15 3.72
2279 2294 0.037139 CCGTTCCGGGAATGTGTGTA 60.037 55.000 23.71 0.00 44.15 2.90
2280 2295 1.355971 CGTTCCGGGAATGTGTGTAG 58.644 55.000 18.89 0.00 0.00 2.74
2281 2296 1.084289 GTTCCGGGAATGTGTGTAGC 58.916 55.000 13.48 0.00 0.00 3.58
2282 2297 0.687920 TTCCGGGAATGTGTGTAGCA 59.312 50.000 5.09 0.00 0.00 3.49
2283 2298 0.908910 TCCGGGAATGTGTGTAGCAT 59.091 50.000 0.00 0.00 0.00 3.79
2284 2299 1.134521 TCCGGGAATGTGTGTAGCATC 60.135 52.381 0.00 0.00 0.00 3.91
2285 2300 1.406751 CCGGGAATGTGTGTAGCATCA 60.407 52.381 0.00 0.00 0.00 3.07
2286 2301 2.564771 CGGGAATGTGTGTAGCATCAT 58.435 47.619 0.00 0.00 0.00 2.45
2287 2302 2.545526 CGGGAATGTGTGTAGCATCATC 59.454 50.000 0.00 0.00 0.00 2.92
2288 2303 2.545526 GGGAATGTGTGTAGCATCATCG 59.454 50.000 0.00 0.00 0.00 3.84
2289 2304 2.545526 GGAATGTGTGTAGCATCATCGG 59.454 50.000 0.00 0.00 0.00 4.18
2290 2305 2.988010 ATGTGTGTAGCATCATCGGT 57.012 45.000 0.00 0.00 0.00 4.69
2291 2306 2.008752 TGTGTGTAGCATCATCGGTG 57.991 50.000 0.00 0.00 0.00 4.94
2292 2307 1.290203 GTGTGTAGCATCATCGGTGG 58.710 55.000 0.00 0.00 0.00 4.61
2293 2308 0.177836 TGTGTAGCATCATCGGTGGG 59.822 55.000 0.00 0.00 0.00 4.61
2294 2309 1.146041 TGTAGCATCATCGGTGGGC 59.854 57.895 0.00 0.00 0.00 5.36
2295 2310 1.146041 GTAGCATCATCGGTGGGCA 59.854 57.895 14.22 0.23 0.00 5.36
2296 2311 0.250467 GTAGCATCATCGGTGGGCAT 60.250 55.000 14.22 4.06 0.00 4.40
2297 2312 0.250424 TAGCATCATCGGTGGGCATG 60.250 55.000 14.22 4.05 0.00 4.06
2298 2313 1.825191 GCATCATCGGTGGGCATGT 60.825 57.895 8.14 0.00 0.00 3.21
2299 2314 2.027325 CATCATCGGTGGGCATGTG 58.973 57.895 0.00 0.00 0.00 3.21
2300 2315 1.152902 ATCATCGGTGGGCATGTGG 60.153 57.895 0.00 0.00 0.00 4.17
2301 2316 1.634865 ATCATCGGTGGGCATGTGGA 61.635 55.000 0.00 0.00 0.00 4.02
2302 2317 1.820906 CATCGGTGGGCATGTGGAG 60.821 63.158 0.00 0.00 0.00 3.86
2303 2318 3.047807 ATCGGTGGGCATGTGGAGG 62.048 63.158 0.00 0.00 0.00 4.30
2304 2319 4.033776 CGGTGGGCATGTGGAGGT 62.034 66.667 0.00 0.00 0.00 3.85
2305 2320 2.361610 GGTGGGCATGTGGAGGTG 60.362 66.667 0.00 0.00 0.00 4.00
2306 2321 2.436109 GTGGGCATGTGGAGGTGT 59.564 61.111 0.00 0.00 0.00 4.16
2307 2322 1.973281 GTGGGCATGTGGAGGTGTG 60.973 63.158 0.00 0.00 0.00 3.82
2308 2323 2.436109 GGGCATGTGGAGGTGTGT 59.564 61.111 0.00 0.00 0.00 3.72
2309 2324 1.675641 GGGCATGTGGAGGTGTGTC 60.676 63.158 0.00 0.00 0.00 3.67
2310 2325 1.376466 GGCATGTGGAGGTGTGTCT 59.624 57.895 0.00 0.00 0.00 3.41
2311 2326 0.674895 GGCATGTGGAGGTGTGTCTC 60.675 60.000 0.00 0.00 0.00 3.36
2316 2331 4.436998 GGAGGTGTGTCTCCGGCG 62.437 72.222 0.00 0.00 43.19 6.46
2317 2332 4.436998 GAGGTGTGTCTCCGGCGG 62.437 72.222 22.51 22.51 0.00 6.13
2318 2333 4.988716 AGGTGTGTCTCCGGCGGA 62.989 66.667 29.14 29.14 0.00 5.54
2319 2334 3.771160 GGTGTGTCTCCGGCGGAT 61.771 66.667 31.23 0.00 0.00 4.18
2320 2335 2.202756 GTGTGTCTCCGGCGGATC 60.203 66.667 31.23 24.22 0.00 3.36
2321 2336 2.362503 TGTGTCTCCGGCGGATCT 60.363 61.111 31.23 0.00 0.00 2.75
2322 2337 2.105128 GTGTCTCCGGCGGATCTG 59.895 66.667 31.23 18.47 0.00 2.90
2323 2338 2.362503 TGTCTCCGGCGGATCTGT 60.363 61.111 31.23 0.00 0.00 3.41
2324 2339 2.413765 GTCTCCGGCGGATCTGTC 59.586 66.667 31.23 12.09 0.00 3.51
2325 2340 2.122167 GTCTCCGGCGGATCTGTCT 61.122 63.158 31.23 0.00 0.00 3.41
2326 2341 1.379977 TCTCCGGCGGATCTGTCTT 60.380 57.895 31.23 0.00 0.00 3.01
2327 2342 0.970937 TCTCCGGCGGATCTGTCTTT 60.971 55.000 31.23 0.00 0.00 2.52
2328 2343 0.807667 CTCCGGCGGATCTGTCTTTG 60.808 60.000 31.23 10.58 0.00 2.77
2329 2344 1.815421 CCGGCGGATCTGTCTTTGG 60.815 63.158 24.41 0.00 0.00 3.28
2330 2345 1.079127 CGGCGGATCTGTCTTTGGT 60.079 57.895 4.31 0.00 0.00 3.67
2331 2346 1.361668 CGGCGGATCTGTCTTTGGTG 61.362 60.000 4.31 0.00 0.00 4.17
2332 2347 1.026718 GGCGGATCTGTCTTTGGTGG 61.027 60.000 2.89 0.00 0.00 4.61
2333 2348 0.036388 GCGGATCTGTCTTTGGTGGA 60.036 55.000 2.89 0.00 0.00 4.02
2334 2349 1.407437 GCGGATCTGTCTTTGGTGGAT 60.407 52.381 2.89 0.00 0.00 3.41
2335 2350 2.941415 GCGGATCTGTCTTTGGTGGATT 60.941 50.000 2.89 0.00 0.00 3.01
2336 2351 3.347216 CGGATCTGTCTTTGGTGGATTT 58.653 45.455 0.00 0.00 0.00 2.17
2337 2352 3.127548 CGGATCTGTCTTTGGTGGATTTG 59.872 47.826 0.00 0.00 0.00 2.32
2338 2353 3.119352 GGATCTGTCTTTGGTGGATTTGC 60.119 47.826 0.00 0.00 0.00 3.68
2339 2354 3.228188 TCTGTCTTTGGTGGATTTGCT 57.772 42.857 0.00 0.00 0.00 3.91
2340 2355 3.149196 TCTGTCTTTGGTGGATTTGCTC 58.851 45.455 0.00 0.00 0.00 4.26
2341 2356 1.879380 TGTCTTTGGTGGATTTGCTCG 59.121 47.619 0.00 0.00 0.00 5.03
2342 2357 1.200020 GTCTTTGGTGGATTTGCTCGG 59.800 52.381 0.00 0.00 0.00 4.63
2343 2358 1.073125 TCTTTGGTGGATTTGCTCGGA 59.927 47.619 0.00 0.00 0.00 4.55
2344 2359 2.094675 CTTTGGTGGATTTGCTCGGAT 58.905 47.619 0.00 0.00 0.00 4.18
2345 2360 1.750193 TTGGTGGATTTGCTCGGATC 58.250 50.000 0.00 0.00 0.00 3.36
2346 2361 0.911769 TGGTGGATTTGCTCGGATCT 59.088 50.000 0.00 0.00 0.00 2.75
2347 2362 1.303309 GGTGGATTTGCTCGGATCTG 58.697 55.000 0.00 0.00 0.00 2.90
2348 2363 1.407437 GGTGGATTTGCTCGGATCTGT 60.407 52.381 0.42 0.00 0.00 3.41
2349 2364 2.359900 GTGGATTTGCTCGGATCTGTT 58.640 47.619 0.42 0.00 0.00 3.16
2350 2365 2.352960 GTGGATTTGCTCGGATCTGTTC 59.647 50.000 0.42 0.00 0.00 3.18
2351 2366 1.594862 GGATTTGCTCGGATCTGTTCG 59.405 52.381 0.42 0.00 0.00 3.95
2352 2367 2.271800 GATTTGCTCGGATCTGTTCGT 58.728 47.619 0.42 0.00 0.00 3.85
2353 2368 1.710013 TTTGCTCGGATCTGTTCGTC 58.290 50.000 0.42 0.00 0.00 4.20
2354 2369 0.456142 TTGCTCGGATCTGTTCGTCG 60.456 55.000 0.42 0.00 0.00 5.12
2355 2370 1.136984 GCTCGGATCTGTTCGTCGT 59.863 57.895 0.42 0.00 0.00 4.34
2356 2371 0.456312 GCTCGGATCTGTTCGTCGTT 60.456 55.000 0.42 0.00 0.00 3.85
2357 2372 1.536149 CTCGGATCTGTTCGTCGTTC 58.464 55.000 0.42 0.00 0.00 3.95
2358 2373 0.179207 TCGGATCTGTTCGTCGTTCG 60.179 55.000 0.42 0.00 41.41 3.95
2359 2374 0.453950 CGGATCTGTTCGTCGTTCGT 60.454 55.000 0.00 0.00 40.80 3.85
2360 2375 1.257539 GGATCTGTTCGTCGTTCGTC 58.742 55.000 0.00 0.00 40.80 4.20
2361 2376 1.135746 GGATCTGTTCGTCGTTCGTCT 60.136 52.381 0.00 0.00 40.80 4.18
2362 2377 2.582687 GATCTGTTCGTCGTTCGTCTT 58.417 47.619 0.00 0.00 40.80 3.01
2363 2378 2.028287 TCTGTTCGTCGTTCGTCTTC 57.972 50.000 0.00 0.00 40.80 2.87
2364 2379 0.695943 CTGTTCGTCGTTCGTCTTCG 59.304 55.000 0.00 0.00 40.80 3.79
2365 2380 0.027979 TGTTCGTCGTTCGTCTTCGT 59.972 50.000 0.00 0.00 40.80 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
159 160 6.209391 CCAGTTTTTCAATGACCATCTTAGGT 59.791 38.462 0.00 0.00 46.82 3.08
267 268 4.345547 CCCAGTCCTCCCTTATTCTTAGAC 59.654 50.000 0.00 0.00 0.00 2.59
475 476 3.375922 ACTTTACGACCGGCCAAATAATG 59.624 43.478 0.00 0.00 0.00 1.90
648 652 0.390866 CTGCATGAAGCTGTCTCCGT 60.391 55.000 0.00 0.00 45.94 4.69
786 791 6.723298 ATGTTTCTCTCCAGGTAGTCATAG 57.277 41.667 0.00 0.00 0.00 2.23
1049 1054 4.681074 TGCCATATATTGTTCGGACAGA 57.319 40.909 0.00 0.00 37.04 3.41
1050 1055 5.947228 ATTGCCATATATTGTTCGGACAG 57.053 39.130 0.00 0.00 37.04 3.51
1249 1255 1.482593 GTTCGTCCCAGTCATCATCCT 59.517 52.381 0.00 0.00 0.00 3.24
1267 1273 3.470888 CTCCATCGCCTCCCGGTT 61.471 66.667 0.00 0.00 37.59 4.44
1293 1299 1.670811 GCGCTGGCTCTTAGCATTTTA 59.329 47.619 0.00 0.00 44.75 1.52
1318 1324 2.133553 CGCACAGATCCTCATCATGTC 58.866 52.381 0.00 0.00 0.00 3.06
1394 1407 6.181944 CGCAAGACCAAAACAAAATTAACAC 58.818 36.000 0.00 0.00 43.02 3.32
1414 1428 1.896660 GACCAAGACCAAGGCGCAA 60.897 57.895 10.83 0.00 0.00 4.85
1518 1532 3.868619 ACACAAAACTAGCCCTAACCA 57.131 42.857 0.00 0.00 0.00 3.67
1520 1534 4.261867 CCCAAACACAAAACTAGCCCTAAC 60.262 45.833 0.00 0.00 0.00 2.34
1565 1579 0.179137 CGTCATCGAGCAGCTTACCA 60.179 55.000 0.00 0.00 39.71 3.25
1620 1634 0.958822 GCAAGAAAGGGGAAAGCGAA 59.041 50.000 0.00 0.00 0.00 4.70
1725 1740 9.006839 TGAAGAATATCATCATAAAGGCATCAC 57.993 33.333 0.00 0.00 0.00 3.06
1726 1741 9.577222 TTGAAGAATATCATCATAAAGGCATCA 57.423 29.630 0.00 0.00 0.00 3.07
1727 1742 9.837525 GTTGAAGAATATCATCATAAAGGCATC 57.162 33.333 0.00 0.00 0.00 3.91
1728 1743 9.358406 TGTTGAAGAATATCATCATAAAGGCAT 57.642 29.630 0.00 0.00 0.00 4.40
1729 1744 8.750515 TGTTGAAGAATATCATCATAAAGGCA 57.249 30.769 0.00 0.00 0.00 4.75
1752 1767 8.015658 GCTCACTACGAAAAGAACAATAAATGT 58.984 33.333 0.00 0.00 46.82 2.71
1753 1768 8.015087 TGCTCACTACGAAAAGAACAATAAATG 58.985 33.333 0.00 0.00 0.00 2.32
1754 1769 8.015658 GTGCTCACTACGAAAAGAACAATAAAT 58.984 33.333 0.00 0.00 0.00 1.40
1755 1770 7.349711 GTGCTCACTACGAAAAGAACAATAAA 58.650 34.615 0.00 0.00 0.00 1.40
1756 1771 6.073440 GGTGCTCACTACGAAAAGAACAATAA 60.073 38.462 0.00 0.00 0.00 1.40
1757 1772 5.407387 GGTGCTCACTACGAAAAGAACAATA 59.593 40.000 0.00 0.00 0.00 1.90
1758 1773 4.213482 GGTGCTCACTACGAAAAGAACAAT 59.787 41.667 0.00 0.00 0.00 2.71
1759 1774 3.558418 GGTGCTCACTACGAAAAGAACAA 59.442 43.478 0.00 0.00 0.00 2.83
1760 1775 3.128349 GGTGCTCACTACGAAAAGAACA 58.872 45.455 0.00 0.00 0.00 3.18
1761 1776 3.391049 AGGTGCTCACTACGAAAAGAAC 58.609 45.455 0.00 0.00 0.00 3.01
1762 1777 3.650139 GAGGTGCTCACTACGAAAAGAA 58.350 45.455 0.00 0.00 0.00 2.52
1763 1778 2.351447 CGAGGTGCTCACTACGAAAAGA 60.351 50.000 11.36 0.00 34.20 2.52
1764 1779 1.986378 CGAGGTGCTCACTACGAAAAG 59.014 52.381 11.36 0.00 34.20 2.27
1765 1780 1.610038 TCGAGGTGCTCACTACGAAAA 59.390 47.619 14.89 0.40 36.57 2.29
1766 1781 1.241165 TCGAGGTGCTCACTACGAAA 58.759 50.000 14.89 0.90 36.57 3.46
1767 1782 1.400846 GATCGAGGTGCTCACTACGAA 59.599 52.381 18.57 8.67 39.95 3.85
1768 1783 1.015109 GATCGAGGTGCTCACTACGA 58.985 55.000 17.64 17.64 40.41 3.43
1769 1784 0.316278 CGATCGAGGTGCTCACTACG 60.316 60.000 10.26 6.53 0.00 3.51
1770 1785 0.733729 ACGATCGAGGTGCTCACTAC 59.266 55.000 24.34 0.00 0.00 2.73
1771 1786 1.460504 AACGATCGAGGTGCTCACTA 58.539 50.000 24.34 0.00 0.00 2.74
1772 1787 1.460504 TAACGATCGAGGTGCTCACT 58.539 50.000 24.34 0.00 0.00 3.41
1773 1788 2.120232 CATAACGATCGAGGTGCTCAC 58.880 52.381 24.34 0.00 0.00 3.51
1774 1789 1.749063 ACATAACGATCGAGGTGCTCA 59.251 47.619 24.34 0.00 0.00 4.26
1775 1790 2.493713 ACATAACGATCGAGGTGCTC 57.506 50.000 24.34 0.00 0.00 4.26
1776 1791 2.961526 AACATAACGATCGAGGTGCT 57.038 45.000 24.34 5.36 0.00 4.40
1777 1792 3.244579 GGTTAACATAACGATCGAGGTGC 59.755 47.826 24.34 2.78 0.00 5.01
1778 1793 3.800506 GGGTTAACATAACGATCGAGGTG 59.199 47.826 24.34 17.75 0.00 4.00
1779 1794 3.448301 TGGGTTAACATAACGATCGAGGT 59.552 43.478 24.34 5.03 0.00 3.85
1780 1795 4.049186 CTGGGTTAACATAACGATCGAGG 58.951 47.826 24.34 4.27 0.00 4.63
1781 1796 4.738740 GTCTGGGTTAACATAACGATCGAG 59.261 45.833 24.34 10.81 0.00 4.04
1782 1797 4.440525 GGTCTGGGTTAACATAACGATCGA 60.441 45.833 24.34 0.00 0.00 3.59
1783 1798 3.800506 GGTCTGGGTTAACATAACGATCG 59.199 47.826 14.88 14.88 0.00 3.69
1784 1799 4.569564 GTGGTCTGGGTTAACATAACGATC 59.430 45.833 8.10 0.00 0.00 3.69
1785 1800 4.224370 AGTGGTCTGGGTTAACATAACGAT 59.776 41.667 8.10 0.00 0.00 3.73
1786 1801 3.579586 AGTGGTCTGGGTTAACATAACGA 59.420 43.478 8.10 0.00 0.00 3.85
1787 1802 3.930848 GAGTGGTCTGGGTTAACATAACG 59.069 47.826 8.10 0.00 0.00 3.18
1788 1803 4.901868 TGAGTGGTCTGGGTTAACATAAC 58.098 43.478 8.10 0.00 0.00 1.89
1789 1804 4.564821 GCTGAGTGGTCTGGGTTAACATAA 60.565 45.833 8.10 0.00 0.00 1.90
1790 1805 3.055385 GCTGAGTGGTCTGGGTTAACATA 60.055 47.826 8.10 0.00 0.00 2.29
1791 1806 2.290323 GCTGAGTGGTCTGGGTTAACAT 60.290 50.000 8.10 0.00 0.00 2.71
1792 1807 1.071699 GCTGAGTGGTCTGGGTTAACA 59.928 52.381 8.10 0.00 0.00 2.41
1793 1808 1.348036 AGCTGAGTGGTCTGGGTTAAC 59.652 52.381 0.00 0.00 0.00 2.01
1794 1809 1.729586 AGCTGAGTGGTCTGGGTTAA 58.270 50.000 0.00 0.00 0.00 2.01
1795 1810 1.729586 AAGCTGAGTGGTCTGGGTTA 58.270 50.000 0.00 0.00 0.00 2.85
1796 1811 0.846693 AAAGCTGAGTGGTCTGGGTT 59.153 50.000 0.00 0.00 0.00 4.11
1797 1812 0.846693 AAAAGCTGAGTGGTCTGGGT 59.153 50.000 0.00 0.00 0.00 4.51
1798 1813 1.528129 GAAAAGCTGAGTGGTCTGGG 58.472 55.000 0.00 0.00 0.00 4.45
1799 1814 1.151668 CGAAAAGCTGAGTGGTCTGG 58.848 55.000 0.00 0.00 0.00 3.86
1800 1815 1.871080 ACGAAAAGCTGAGTGGTCTG 58.129 50.000 0.00 0.00 0.00 3.51
1801 1816 2.622064 AACGAAAAGCTGAGTGGTCT 57.378 45.000 0.00 0.00 0.00 3.85
1802 1817 3.692791 AAAACGAAAAGCTGAGTGGTC 57.307 42.857 0.00 0.00 0.00 4.02
1821 1836 5.593679 TTACGTTCCATTTGACCCAAAAA 57.406 34.783 0.00 0.00 36.90 1.94
1822 1837 5.593679 TTTACGTTCCATTTGACCCAAAA 57.406 34.783 0.00 0.00 36.90 2.44
1823 1838 5.793030 ATTTACGTTCCATTTGACCCAAA 57.207 34.783 0.00 0.00 37.75 3.28
1824 1839 5.509840 CCAATTTACGTTCCATTTGACCCAA 60.510 40.000 0.00 0.00 0.00 4.12
1825 1840 4.021894 CCAATTTACGTTCCATTTGACCCA 60.022 41.667 0.00 0.00 0.00 4.51
1826 1841 4.218852 TCCAATTTACGTTCCATTTGACCC 59.781 41.667 0.00 0.00 0.00 4.46
1827 1842 5.379732 TCCAATTTACGTTCCATTTGACC 57.620 39.130 0.00 0.00 0.00 4.02
1828 1843 6.526674 GTCATCCAATTTACGTTCCATTTGAC 59.473 38.462 0.00 0.00 0.00 3.18
1829 1844 6.207614 TGTCATCCAATTTACGTTCCATTTGA 59.792 34.615 0.00 0.00 0.00 2.69
1830 1845 6.385843 TGTCATCCAATTTACGTTCCATTTG 58.614 36.000 0.00 0.00 0.00 2.32
1831 1846 6.582677 TGTCATCCAATTTACGTTCCATTT 57.417 33.333 0.00 0.00 0.00 2.32
1832 1847 6.376864 TGATGTCATCCAATTTACGTTCCATT 59.623 34.615 10.36 0.00 0.00 3.16
1833 1848 5.885352 TGATGTCATCCAATTTACGTTCCAT 59.115 36.000 10.36 0.00 0.00 3.41
1834 1849 5.249420 TGATGTCATCCAATTTACGTTCCA 58.751 37.500 10.36 0.00 0.00 3.53
1835 1850 5.811399 TGATGTCATCCAATTTACGTTCC 57.189 39.130 10.36 0.00 0.00 3.62
1836 1851 6.197096 GCAATGATGTCATCCAATTTACGTTC 59.803 38.462 10.36 0.00 35.10 3.95
1837 1852 6.035843 GCAATGATGTCATCCAATTTACGTT 58.964 36.000 10.36 0.00 35.10 3.99
1838 1853 5.357878 AGCAATGATGTCATCCAATTTACGT 59.642 36.000 10.36 0.00 35.10 3.57
1839 1854 5.684184 CAGCAATGATGTCATCCAATTTACG 59.316 40.000 10.36 0.00 35.10 3.18
1840 1855 6.798482 TCAGCAATGATGTCATCCAATTTAC 58.202 36.000 10.36 0.44 35.10 2.01
1841 1856 7.407393 TTCAGCAATGATGTCATCCAATTTA 57.593 32.000 10.36 0.00 35.10 1.40
1842 1857 5.925506 TCAGCAATGATGTCATCCAATTT 57.074 34.783 10.36 0.00 35.10 1.82
1843 1858 5.925506 TTCAGCAATGATGTCATCCAATT 57.074 34.783 10.36 1.85 35.10 2.32
1844 1859 5.362717 ACATTCAGCAATGATGTCATCCAAT 59.637 36.000 10.36 0.00 41.97 3.16
1845 1860 4.707934 ACATTCAGCAATGATGTCATCCAA 59.292 37.500 10.36 0.00 41.97 3.53
1846 1861 4.274978 ACATTCAGCAATGATGTCATCCA 58.725 39.130 10.36 0.00 41.97 3.41
1847 1862 4.913335 ACATTCAGCAATGATGTCATCC 57.087 40.909 10.36 0.00 41.97 3.51
1848 1863 6.615264 AGTACATTCAGCAATGATGTCATC 57.385 37.500 5.83 5.83 41.97 2.92
1849 1864 7.400599 AAAGTACATTCAGCAATGATGTCAT 57.599 32.000 0.00 0.00 41.97 3.06
1850 1865 6.822667 AAAGTACATTCAGCAATGATGTCA 57.177 33.333 0.00 0.00 41.97 3.58
1851 1866 9.793252 AAATAAAGTACATTCAGCAATGATGTC 57.207 29.630 0.00 0.00 41.97 3.06
1857 1872 9.143631 GCAAGAAAATAAAGTACATTCAGCAAT 57.856 29.630 0.00 0.00 0.00 3.56
1858 1873 8.359642 AGCAAGAAAATAAAGTACATTCAGCAA 58.640 29.630 0.00 0.00 0.00 3.91
1859 1874 7.809331 CAGCAAGAAAATAAAGTACATTCAGCA 59.191 33.333 0.00 0.00 0.00 4.41
1860 1875 7.201384 GCAGCAAGAAAATAAAGTACATTCAGC 60.201 37.037 0.00 0.00 0.00 4.26
1861 1876 8.025445 AGCAGCAAGAAAATAAAGTACATTCAG 58.975 33.333 0.00 0.00 0.00 3.02
1862 1877 7.885297 AGCAGCAAGAAAATAAAGTACATTCA 58.115 30.769 0.00 0.00 0.00 2.57
1863 1878 9.278734 GTAGCAGCAAGAAAATAAAGTACATTC 57.721 33.333 0.00 0.00 0.00 2.67
1864 1879 8.244113 GGTAGCAGCAAGAAAATAAAGTACATT 58.756 33.333 0.00 0.00 0.00 2.71
1865 1880 7.414098 CGGTAGCAGCAAGAAAATAAAGTACAT 60.414 37.037 0.00 0.00 0.00 2.29
1866 1881 6.128391 CGGTAGCAGCAAGAAAATAAAGTACA 60.128 38.462 0.00 0.00 0.00 2.90
1867 1882 6.091713 TCGGTAGCAGCAAGAAAATAAAGTAC 59.908 38.462 0.00 0.00 0.00 2.73
1868 1883 6.167685 TCGGTAGCAGCAAGAAAATAAAGTA 58.832 36.000 0.00 0.00 0.00 2.24
1869 1884 5.001232 TCGGTAGCAGCAAGAAAATAAAGT 58.999 37.500 0.00 0.00 0.00 2.66
1870 1885 5.545658 TCGGTAGCAGCAAGAAAATAAAG 57.454 39.130 0.00 0.00 0.00 1.85
1871 1886 5.239744 TGTTCGGTAGCAGCAAGAAAATAAA 59.760 36.000 0.00 0.00 0.00 1.40
1872 1887 4.757657 TGTTCGGTAGCAGCAAGAAAATAA 59.242 37.500 0.00 0.00 0.00 1.40
1873 1888 4.320023 TGTTCGGTAGCAGCAAGAAAATA 58.680 39.130 0.00 0.00 0.00 1.40
1874 1889 3.146066 TGTTCGGTAGCAGCAAGAAAAT 58.854 40.909 0.00 0.00 0.00 1.82
1875 1890 2.566913 TGTTCGGTAGCAGCAAGAAAA 58.433 42.857 0.00 0.00 0.00 2.29
1876 1891 2.248280 TGTTCGGTAGCAGCAAGAAA 57.752 45.000 0.00 0.00 0.00 2.52
1877 1892 2.472695 ATGTTCGGTAGCAGCAAGAA 57.527 45.000 0.00 0.00 0.00 2.52
1878 1893 3.118775 ACATATGTTCGGTAGCAGCAAGA 60.119 43.478 1.41 0.00 0.00 3.02
1879 1894 3.198068 ACATATGTTCGGTAGCAGCAAG 58.802 45.455 1.41 0.00 0.00 4.01
1880 1895 3.260475 ACATATGTTCGGTAGCAGCAA 57.740 42.857 1.41 0.00 0.00 3.91
1881 1896 2.979814 ACATATGTTCGGTAGCAGCA 57.020 45.000 1.41 0.00 0.00 4.41
1882 1897 3.493503 GGTAACATATGTTCGGTAGCAGC 59.506 47.826 24.00 10.96 39.31 5.25
1883 1898 3.734231 CGGTAACATATGTTCGGTAGCAG 59.266 47.826 24.00 9.26 39.31 4.24
1884 1899 3.380954 TCGGTAACATATGTTCGGTAGCA 59.619 43.478 24.00 2.59 39.31 3.49
1885 1900 3.968649 TCGGTAACATATGTTCGGTAGC 58.031 45.455 24.00 14.83 39.31 3.58
1886 1901 5.824429 TCTTCGGTAACATATGTTCGGTAG 58.176 41.667 24.00 19.52 39.31 3.18
1887 1902 5.833406 TCTTCGGTAACATATGTTCGGTA 57.167 39.130 24.00 12.72 39.31 4.02
1888 1903 4.724074 TCTTCGGTAACATATGTTCGGT 57.276 40.909 24.00 3.61 39.31 4.69
1889 1904 6.598753 ATTTCTTCGGTAACATATGTTCGG 57.401 37.500 24.00 17.80 39.31 4.30
1890 1905 8.172484 TGAAATTTCTTCGGTAACATATGTTCG 58.828 33.333 24.00 20.91 39.31 3.95
1892 1907 9.787532 CATGAAATTTCTTCGGTAACATATGTT 57.212 29.630 23.80 23.80 41.73 2.71
1893 1908 7.915397 GCATGAAATTTCTTCGGTAACATATGT 59.085 33.333 18.64 1.41 0.00 2.29
1894 1909 7.379529 GGCATGAAATTTCTTCGGTAACATATG 59.620 37.037 18.64 10.16 0.00 1.78
1895 1910 7.425606 GGCATGAAATTTCTTCGGTAACATAT 58.574 34.615 18.64 0.00 0.00 1.78
1896 1911 6.183360 GGGCATGAAATTTCTTCGGTAACATA 60.183 38.462 18.64 0.00 0.00 2.29
1897 1912 5.394115 GGGCATGAAATTTCTTCGGTAACAT 60.394 40.000 18.64 0.00 0.00 2.71
1898 1913 4.082463 GGGCATGAAATTTCTTCGGTAACA 60.082 41.667 18.64 0.00 0.00 2.41
1899 1914 4.421058 GGGCATGAAATTTCTTCGGTAAC 58.579 43.478 18.64 2.23 0.00 2.50
1900 1915 3.445805 GGGGCATGAAATTTCTTCGGTAA 59.554 43.478 18.64 0.00 0.00 2.85
1901 1916 3.020984 GGGGCATGAAATTTCTTCGGTA 58.979 45.455 18.64 0.00 0.00 4.02
1902 1917 1.824852 GGGGCATGAAATTTCTTCGGT 59.175 47.619 18.64 0.00 0.00 4.69
1903 1918 1.824230 TGGGGCATGAAATTTCTTCGG 59.176 47.619 18.64 7.07 0.00 4.30
1904 1919 3.056607 AGTTGGGGCATGAAATTTCTTCG 60.057 43.478 18.64 8.39 0.00 3.79
1905 1920 4.498241 GAGTTGGGGCATGAAATTTCTTC 58.502 43.478 18.64 7.80 0.00 2.87
1906 1921 3.261643 GGAGTTGGGGCATGAAATTTCTT 59.738 43.478 18.64 10.06 0.00 2.52
1907 1922 2.833943 GGAGTTGGGGCATGAAATTTCT 59.166 45.455 18.64 2.40 0.00 2.52
1908 1923 2.093500 GGGAGTTGGGGCATGAAATTTC 60.093 50.000 11.41 11.41 0.00 2.17
1909 1924 1.908619 GGGAGTTGGGGCATGAAATTT 59.091 47.619 0.00 0.00 0.00 1.82
1910 1925 1.203288 TGGGAGTTGGGGCATGAAATT 60.203 47.619 0.00 0.00 0.00 1.82
1911 1926 0.413037 TGGGAGTTGGGGCATGAAAT 59.587 50.000 0.00 0.00 0.00 2.17
1912 1927 0.251742 CTGGGAGTTGGGGCATGAAA 60.252 55.000 0.00 0.00 0.00 2.69
1913 1928 1.139498 TCTGGGAGTTGGGGCATGAA 61.139 55.000 0.00 0.00 0.00 2.57
1914 1929 0.920763 ATCTGGGAGTTGGGGCATGA 60.921 55.000 0.00 0.00 0.00 3.07
1915 1930 0.032813 AATCTGGGAGTTGGGGCATG 60.033 55.000 0.00 0.00 0.00 4.06
1916 1931 1.607225 TAATCTGGGAGTTGGGGCAT 58.393 50.000 0.00 0.00 0.00 4.40
1917 1932 1.377690 TTAATCTGGGAGTTGGGGCA 58.622 50.000 0.00 0.00 0.00 5.36
1918 1933 2.100197 GTTTAATCTGGGAGTTGGGGC 58.900 52.381 0.00 0.00 0.00 5.80
1919 1934 2.026636 TCGTTTAATCTGGGAGTTGGGG 60.027 50.000 0.00 0.00 0.00 4.96
1920 1935 3.343941 TCGTTTAATCTGGGAGTTGGG 57.656 47.619 0.00 0.00 0.00 4.12
1921 1936 5.699097 TTTTCGTTTAATCTGGGAGTTGG 57.301 39.130 0.00 0.00 0.00 3.77
1922 1937 6.908825 TCATTTTCGTTTAATCTGGGAGTTG 58.091 36.000 0.00 0.00 0.00 3.16
1923 1938 6.940298 TCTCATTTTCGTTTAATCTGGGAGTT 59.060 34.615 0.00 0.00 0.00 3.01
1924 1939 6.472887 TCTCATTTTCGTTTAATCTGGGAGT 58.527 36.000 0.00 0.00 0.00 3.85
1925 1940 6.985188 TCTCATTTTCGTTTAATCTGGGAG 57.015 37.500 0.00 0.00 0.00 4.30
1926 1941 7.109501 TGATCTCATTTTCGTTTAATCTGGGA 58.890 34.615 0.00 0.00 0.00 4.37
1927 1942 7.320443 TGATCTCATTTTCGTTTAATCTGGG 57.680 36.000 0.00 0.00 0.00 4.45
1944 1959 8.896744 CCTGAGCTTTTTATTGTATTGATCTCA 58.103 33.333 0.00 0.00 0.00 3.27
1945 1960 9.113838 TCCTGAGCTTTTTATTGTATTGATCTC 57.886 33.333 0.00 0.00 0.00 2.75
1946 1961 9.118300 CTCCTGAGCTTTTTATTGTATTGATCT 57.882 33.333 0.00 0.00 0.00 2.75
1965 1980 0.738975 TCGTTACATCCGCTCCTGAG 59.261 55.000 0.00 0.00 0.00 3.35
1966 1981 1.399714 ATCGTTACATCCGCTCCTGA 58.600 50.000 0.00 0.00 0.00 3.86
1967 1982 3.577649 ATATCGTTACATCCGCTCCTG 57.422 47.619 0.00 0.00 0.00 3.86
1968 1983 3.321111 ACAATATCGTTACATCCGCTCCT 59.679 43.478 0.00 0.00 0.00 3.69
1969 1984 3.650139 ACAATATCGTTACATCCGCTCC 58.350 45.455 0.00 0.00 0.00 4.70
1970 1985 6.128902 CCTTAACAATATCGTTACATCCGCTC 60.129 42.308 0.00 0.00 31.19 5.03
1971 1986 5.694910 CCTTAACAATATCGTTACATCCGCT 59.305 40.000 0.00 0.00 31.19 5.52
1972 1987 5.693104 TCCTTAACAATATCGTTACATCCGC 59.307 40.000 0.00 0.00 31.19 5.54
1973 1988 7.561556 GTTCCTTAACAATATCGTTACATCCG 58.438 38.462 0.00 0.00 35.56 4.18
1974 1989 7.223387 ACGTTCCTTAACAATATCGTTACATCC 59.777 37.037 0.00 0.00 35.16 3.51
1975 1990 8.054236 CACGTTCCTTAACAATATCGTTACATC 58.946 37.037 0.00 0.00 35.16 3.06
1976 1991 7.464977 GCACGTTCCTTAACAATATCGTTACAT 60.465 37.037 0.00 0.00 35.16 2.29
1977 1992 6.183360 GCACGTTCCTTAACAATATCGTTACA 60.183 38.462 0.00 0.00 35.16 2.41
1978 1993 6.180567 GCACGTTCCTTAACAATATCGTTAC 58.819 40.000 0.00 0.00 35.16 2.50
1979 1994 5.291614 GGCACGTTCCTTAACAATATCGTTA 59.708 40.000 0.00 0.00 35.16 3.18
1980 1995 4.093850 GGCACGTTCCTTAACAATATCGTT 59.906 41.667 0.00 0.00 35.16 3.85
1981 1996 3.619929 GGCACGTTCCTTAACAATATCGT 59.380 43.478 0.00 0.00 35.16 3.73
1982 1997 3.001939 GGGCACGTTCCTTAACAATATCG 59.998 47.826 3.73 0.00 35.16 2.92
1983 1998 3.942748 TGGGCACGTTCCTTAACAATATC 59.057 43.478 3.73 0.00 35.16 1.63
1984 1999 3.945285 CTGGGCACGTTCCTTAACAATAT 59.055 43.478 3.73 0.00 35.16 1.28
1985 2000 3.340034 CTGGGCACGTTCCTTAACAATA 58.660 45.455 3.73 0.00 35.16 1.90
1986 2001 2.159382 CTGGGCACGTTCCTTAACAAT 58.841 47.619 3.73 0.00 35.16 2.71
1987 2002 1.600023 CTGGGCACGTTCCTTAACAA 58.400 50.000 3.73 0.00 35.16 2.83
1988 2003 0.887387 GCTGGGCACGTTCCTTAACA 60.887 55.000 3.73 0.00 35.16 2.41
1989 2004 1.583495 GGCTGGGCACGTTCCTTAAC 61.583 60.000 3.73 0.00 0.00 2.01
1990 2005 1.302993 GGCTGGGCACGTTCCTTAA 60.303 57.895 3.73 0.00 0.00 1.85
1991 2006 2.349755 GGCTGGGCACGTTCCTTA 59.650 61.111 3.73 0.00 0.00 2.69
1992 2007 3.884774 TGGCTGGGCACGTTCCTT 61.885 61.111 3.73 0.00 0.00 3.36
1993 2008 4.643387 GTGGCTGGGCACGTTCCT 62.643 66.667 11.28 0.00 0.00 3.36
2006 2021 4.382320 TACGTTGGAGGCGGTGGC 62.382 66.667 0.00 0.00 38.90 5.01
2007 2022 2.125673 CTACGTTGGAGGCGGTGG 60.126 66.667 0.00 0.00 0.00 4.61
2008 2023 1.940883 TAGCTACGTTGGAGGCGGTG 61.941 60.000 0.00 0.00 0.00 4.94
2009 2024 1.664321 CTAGCTACGTTGGAGGCGGT 61.664 60.000 0.00 0.00 0.00 5.68
2010 2025 1.065928 CTAGCTACGTTGGAGGCGG 59.934 63.158 0.00 0.00 0.00 6.13
2011 2026 1.589196 GCTAGCTACGTTGGAGGCG 60.589 63.158 7.70 0.00 0.00 5.52
2012 2027 1.227292 GGCTAGCTACGTTGGAGGC 60.227 63.158 15.72 0.00 0.00 4.70
2013 2028 1.065928 CGGCTAGCTACGTTGGAGG 59.934 63.158 15.72 0.00 0.00 4.30
2014 2029 1.589196 GCGGCTAGCTACGTTGGAG 60.589 63.158 15.72 0.00 44.04 3.86
2015 2030 2.493030 GCGGCTAGCTACGTTGGA 59.507 61.111 15.72 0.00 44.04 3.53
2029 2044 4.050934 GTTTTGGGAAGGCGGCGG 62.051 66.667 9.78 0.00 0.00 6.13
2030 2045 1.644786 CTAGTTTTGGGAAGGCGGCG 61.645 60.000 0.51 0.51 0.00 6.46
2031 2046 1.313091 CCTAGTTTTGGGAAGGCGGC 61.313 60.000 0.00 0.00 0.00 6.53
2032 2047 0.326927 TCCTAGTTTTGGGAAGGCGG 59.673 55.000 0.00 0.00 29.89 6.13
2033 2048 2.420058 ATCCTAGTTTTGGGAAGGCG 57.580 50.000 0.00 0.00 37.52 5.52
2034 2049 3.969553 AGAATCCTAGTTTTGGGAAGGC 58.030 45.455 0.00 0.00 37.52 4.35
2035 2050 5.336770 GCAAAGAATCCTAGTTTTGGGAAGG 60.337 44.000 0.00 0.00 37.52 3.46
2036 2051 5.336770 GGCAAAGAATCCTAGTTTTGGGAAG 60.337 44.000 0.00 0.00 37.52 3.46
2037 2052 4.526650 GGCAAAGAATCCTAGTTTTGGGAA 59.473 41.667 0.00 0.00 37.52 3.97
2038 2053 4.086457 GGCAAAGAATCCTAGTTTTGGGA 58.914 43.478 0.00 0.00 38.46 4.37
2039 2054 4.089361 AGGCAAAGAATCCTAGTTTTGGG 58.911 43.478 0.00 0.00 32.59 4.12
2040 2055 4.158579 GGAGGCAAAGAATCCTAGTTTTGG 59.841 45.833 0.00 0.00 32.59 3.28
2041 2056 4.158579 GGGAGGCAAAGAATCCTAGTTTTG 59.841 45.833 0.00 0.00 33.40 2.44
2042 2057 4.202673 TGGGAGGCAAAGAATCCTAGTTTT 60.203 41.667 0.00 0.00 33.40 2.43
2043 2058 3.333680 TGGGAGGCAAAGAATCCTAGTTT 59.666 43.478 0.00 0.00 33.40 2.66
2044 2059 2.919602 TGGGAGGCAAAGAATCCTAGTT 59.080 45.455 0.00 0.00 33.40 2.24
2045 2060 2.239907 GTGGGAGGCAAAGAATCCTAGT 59.760 50.000 0.00 0.00 33.40 2.57
2046 2061 2.422093 GGTGGGAGGCAAAGAATCCTAG 60.422 54.545 0.00 0.00 33.40 3.02
2047 2062 1.564348 GGTGGGAGGCAAAGAATCCTA 59.436 52.381 0.00 0.00 33.40 2.94
2048 2063 0.332972 GGTGGGAGGCAAAGAATCCT 59.667 55.000 0.00 0.00 33.40 3.24
2049 2064 1.032114 CGGTGGGAGGCAAAGAATCC 61.032 60.000 0.00 0.00 0.00 3.01
2050 2065 1.032114 CCGGTGGGAGGCAAAGAATC 61.032 60.000 0.00 0.00 34.06 2.52
2051 2066 1.000896 CCGGTGGGAGGCAAAGAAT 60.001 57.895 0.00 0.00 34.06 2.40
2052 2067 2.434331 CCGGTGGGAGGCAAAGAA 59.566 61.111 0.00 0.00 34.06 2.52
2090 2105 2.732619 CCCTAAGGCCACCGGAGAC 61.733 68.421 9.46 0.00 0.00 3.36
2091 2106 2.365105 CCCTAAGGCCACCGGAGA 60.365 66.667 9.46 0.00 0.00 3.71
2109 2124 2.388890 GATCCACTCCGCCTCCATGG 62.389 65.000 4.97 4.97 39.35 3.66
2110 2125 1.070445 GATCCACTCCGCCTCCATG 59.930 63.158 0.00 0.00 0.00 3.66
2111 2126 1.074926 AGATCCACTCCGCCTCCAT 60.075 57.895 0.00 0.00 0.00 3.41
2112 2127 1.758514 GAGATCCACTCCGCCTCCA 60.759 63.158 0.00 0.00 39.53 3.86
2113 2128 2.851071 CGAGATCCACTCCGCCTCC 61.851 68.421 0.00 0.00 42.18 4.30
2114 2129 2.725008 CGAGATCCACTCCGCCTC 59.275 66.667 0.00 0.00 42.18 4.70
2115 2130 2.835431 CCGAGATCCACTCCGCCT 60.835 66.667 0.00 0.00 42.18 5.52
2116 2131 4.593864 GCCGAGATCCACTCCGCC 62.594 72.222 0.00 0.00 41.54 6.13
2117 2132 4.593864 GGCCGAGATCCACTCCGC 62.594 72.222 0.00 0.00 44.73 5.54
2118 2133 3.917760 GGGCCGAGATCCACTCCG 61.918 72.222 0.00 0.00 42.18 4.63
2119 2134 2.066999 AAGGGCCGAGATCCACTCC 61.067 63.158 0.00 0.00 42.18 3.85
2120 2135 1.144936 CAAGGGCCGAGATCCACTC 59.855 63.158 0.00 0.00 41.79 3.51
2121 2136 3.036429 GCAAGGGCCGAGATCCACT 62.036 63.158 0.00 0.00 0.00 4.00
2122 2137 2.514824 GCAAGGGCCGAGATCCAC 60.515 66.667 0.00 0.00 0.00 4.02
2170 2185 9.163899 GGACACAAACCCTAACAAAATTTTTAA 57.836 29.630 0.00 0.00 0.00 1.52
2171 2186 8.541234 AGGACACAAACCCTAACAAAATTTTTA 58.459 29.630 0.00 0.00 0.00 1.52
2172 2187 7.335673 CAGGACACAAACCCTAACAAAATTTTT 59.664 33.333 0.00 0.00 0.00 1.94
2173 2188 6.821160 CAGGACACAAACCCTAACAAAATTTT 59.179 34.615 0.00 0.00 0.00 1.82
2174 2189 6.345298 CAGGACACAAACCCTAACAAAATTT 58.655 36.000 0.00 0.00 0.00 1.82
2175 2190 5.683770 GCAGGACACAAACCCTAACAAAATT 60.684 40.000 0.00 0.00 0.00 1.82
2176 2191 4.202212 GCAGGACACAAACCCTAACAAAAT 60.202 41.667 0.00 0.00 0.00 1.82
2177 2192 3.131400 GCAGGACACAAACCCTAACAAAA 59.869 43.478 0.00 0.00 0.00 2.44
2178 2193 2.691011 GCAGGACACAAACCCTAACAAA 59.309 45.455 0.00 0.00 0.00 2.83
2179 2194 2.092103 AGCAGGACACAAACCCTAACAA 60.092 45.455 0.00 0.00 0.00 2.83
2180 2195 1.493022 AGCAGGACACAAACCCTAACA 59.507 47.619 0.00 0.00 0.00 2.41
2181 2196 2.152016 GAGCAGGACACAAACCCTAAC 58.848 52.381 0.00 0.00 0.00 2.34
2182 2197 1.771854 TGAGCAGGACACAAACCCTAA 59.228 47.619 0.00 0.00 0.00 2.69
2183 2198 1.347707 CTGAGCAGGACACAAACCCTA 59.652 52.381 0.00 0.00 0.00 3.53
2184 2199 0.109342 CTGAGCAGGACACAAACCCT 59.891 55.000 0.00 0.00 0.00 4.34
2185 2200 2.633860 CTGAGCAGGACACAAACCC 58.366 57.895 0.00 0.00 0.00 4.11
2196 2211 1.153667 GTCTCGCCTTCCTGAGCAG 60.154 63.158 0.00 0.00 32.20 4.24
2197 2212 2.973899 GTCTCGCCTTCCTGAGCA 59.026 61.111 0.00 0.00 32.20 4.26
2198 2213 2.202676 CGTCTCGCCTTCCTGAGC 60.203 66.667 0.00 0.00 32.20 4.26
2199 2214 2.492090 CCGTCTCGCCTTCCTGAG 59.508 66.667 0.00 0.00 0.00 3.35
2200 2215 3.760035 GCCGTCTCGCCTTCCTGA 61.760 66.667 0.00 0.00 0.00 3.86
2216 2231 3.438017 ATCTTCAGAGAGCCGCCGC 62.438 63.158 0.00 0.00 34.85 6.53
2217 2232 1.591059 CATCTTCAGAGAGCCGCCG 60.591 63.158 0.00 0.00 34.85 6.46
2218 2233 1.227497 CCATCTTCAGAGAGCCGCC 60.227 63.158 0.00 0.00 34.85 6.13
2219 2234 0.176680 TTCCATCTTCAGAGAGCCGC 59.823 55.000 0.00 0.00 34.85 6.53
2220 2235 2.906691 ATTCCATCTTCAGAGAGCCG 57.093 50.000 0.00 0.00 34.85 5.52
2221 2236 5.062528 CCTTTATTCCATCTTCAGAGAGCC 58.937 45.833 0.00 0.00 34.85 4.70
2222 2237 5.679601 ACCTTTATTCCATCTTCAGAGAGC 58.320 41.667 0.00 0.00 34.85 4.09
2223 2238 7.123355 AGACCTTTATTCCATCTTCAGAGAG 57.877 40.000 0.00 0.00 34.85 3.20
2224 2239 6.098982 GGAGACCTTTATTCCATCTTCAGAGA 59.901 42.308 0.00 0.00 36.09 3.10
2225 2240 6.287525 GGAGACCTTTATTCCATCTTCAGAG 58.712 44.000 0.00 0.00 0.00 3.35
2226 2241 6.240549 GGAGACCTTTATTCCATCTTCAGA 57.759 41.667 0.00 0.00 0.00 3.27
2244 2259 1.823041 CGGGGACTAGACGGGAGAC 60.823 68.421 0.00 0.00 0.00 3.36
2245 2260 1.856539 AACGGGGACTAGACGGGAGA 61.857 60.000 0.00 0.00 0.00 3.71
2246 2261 1.379576 AACGGGGACTAGACGGGAG 60.380 63.158 0.00 0.00 0.00 4.30
2247 2262 1.379044 GAACGGGGACTAGACGGGA 60.379 63.158 0.00 0.00 0.00 5.14
2248 2263 2.421399 GGAACGGGGACTAGACGGG 61.421 68.421 0.00 0.00 0.00 5.28
2249 2264 3.204418 GGAACGGGGACTAGACGG 58.796 66.667 0.00 0.00 0.00 4.79
2262 2277 1.084289 GCTACACACATTCCCGGAAC 58.916 55.000 0.73 0.00 0.00 3.62
2263 2278 0.687920 TGCTACACACATTCCCGGAA 59.312 50.000 0.73 1.31 0.00 4.30
2264 2279 0.908910 ATGCTACACACATTCCCGGA 59.091 50.000 0.73 0.00 0.00 5.14
2265 2280 1.299541 GATGCTACACACATTCCCGG 58.700 55.000 0.00 0.00 0.00 5.73
2266 2281 2.022764 TGATGCTACACACATTCCCG 57.977 50.000 0.00 0.00 0.00 5.14
2267 2282 2.545526 CGATGATGCTACACACATTCCC 59.454 50.000 0.00 0.00 0.00 3.97
2268 2283 2.545526 CCGATGATGCTACACACATTCC 59.454 50.000 0.00 0.00 0.00 3.01
2269 2284 3.001634 CACCGATGATGCTACACACATTC 59.998 47.826 0.00 0.00 0.00 2.67
2270 2285 2.938451 CACCGATGATGCTACACACATT 59.062 45.455 0.00 0.00 0.00 2.71
2271 2286 2.554142 CACCGATGATGCTACACACAT 58.446 47.619 0.00 0.00 0.00 3.21
2272 2287 1.405391 CCACCGATGATGCTACACACA 60.405 52.381 0.00 0.00 0.00 3.72
2273 2288 1.290203 CCACCGATGATGCTACACAC 58.710 55.000 0.00 0.00 0.00 3.82
2274 2289 0.177836 CCCACCGATGATGCTACACA 59.822 55.000 0.00 0.00 0.00 3.72
2275 2290 1.160329 GCCCACCGATGATGCTACAC 61.160 60.000 0.00 0.00 0.00 2.90
2276 2291 1.146041 GCCCACCGATGATGCTACA 59.854 57.895 0.00 0.00 0.00 2.74
2277 2292 0.250467 ATGCCCACCGATGATGCTAC 60.250 55.000 0.00 0.00 0.00 3.58
2278 2293 0.250424 CATGCCCACCGATGATGCTA 60.250 55.000 0.00 0.00 0.00 3.49
2279 2294 1.527611 CATGCCCACCGATGATGCT 60.528 57.895 0.00 0.00 0.00 3.79
2280 2295 1.825191 ACATGCCCACCGATGATGC 60.825 57.895 0.00 0.00 0.00 3.91
2281 2296 1.449726 CCACATGCCCACCGATGATG 61.450 60.000 0.00 0.00 0.00 3.07
2282 2297 1.152902 CCACATGCCCACCGATGAT 60.153 57.895 0.00 0.00 0.00 2.45
2283 2298 2.256072 CTCCACATGCCCACCGATGA 62.256 60.000 0.00 0.00 0.00 2.92
2284 2299 1.820906 CTCCACATGCCCACCGATG 60.821 63.158 0.00 0.00 0.00 3.84
2285 2300 2.591753 CTCCACATGCCCACCGAT 59.408 61.111 0.00 0.00 0.00 4.18
2286 2301 3.716195 CCTCCACATGCCCACCGA 61.716 66.667 0.00 0.00 0.00 4.69
2287 2302 4.033776 ACCTCCACATGCCCACCG 62.034 66.667 0.00 0.00 0.00 4.94
2288 2303 2.361610 CACCTCCACATGCCCACC 60.362 66.667 0.00 0.00 0.00 4.61
2289 2304 1.973281 CACACCTCCACATGCCCAC 60.973 63.158 0.00 0.00 0.00 4.61
2290 2305 2.410322 GACACACCTCCACATGCCCA 62.410 60.000 0.00 0.00 0.00 5.36
2291 2306 1.675641 GACACACCTCCACATGCCC 60.676 63.158 0.00 0.00 0.00 5.36
2292 2307 0.674895 GAGACACACCTCCACATGCC 60.675 60.000 0.00 0.00 0.00 4.40
2293 2308 2.846371 GAGACACACCTCCACATGC 58.154 57.895 0.00 0.00 0.00 4.06
2300 2315 4.436998 CCGCCGGAGACACACCTC 62.437 72.222 5.05 0.00 0.00 3.85
2301 2316 4.988716 TCCGCCGGAGACACACCT 62.989 66.667 5.05 0.00 0.00 4.00
2302 2317 3.718210 GATCCGCCGGAGACACACC 62.718 68.421 13.12 0.00 34.05 4.16
2303 2318 2.202756 GATCCGCCGGAGACACAC 60.203 66.667 13.12 0.00 34.05 3.82
2304 2319 2.362503 AGATCCGCCGGAGACACA 60.363 61.111 13.12 0.00 34.05 3.72
2305 2320 2.105128 CAGATCCGCCGGAGACAC 59.895 66.667 13.12 3.15 34.05 3.67
2306 2321 2.362503 ACAGATCCGCCGGAGACA 60.363 61.111 13.12 0.00 34.05 3.41
2307 2322 1.668101 AAGACAGATCCGCCGGAGAC 61.668 60.000 13.12 8.53 34.05 3.36
2308 2323 0.970937 AAAGACAGATCCGCCGGAGA 60.971 55.000 13.12 0.00 34.05 3.71
2309 2324 0.807667 CAAAGACAGATCCGCCGGAG 60.808 60.000 13.12 0.00 34.05 4.63
2310 2325 1.218047 CAAAGACAGATCCGCCGGA 59.782 57.895 8.97 8.97 35.55 5.14
2311 2326 1.815421 CCAAAGACAGATCCGCCGG 60.815 63.158 0.00 0.00 0.00 6.13
2312 2327 1.079127 ACCAAAGACAGATCCGCCG 60.079 57.895 0.00 0.00 0.00 6.46
2313 2328 1.026718 CCACCAAAGACAGATCCGCC 61.027 60.000 0.00 0.00 0.00 6.13
2314 2329 0.036388 TCCACCAAAGACAGATCCGC 60.036 55.000 0.00 0.00 0.00 5.54
2315 2330 2.698855 ATCCACCAAAGACAGATCCG 57.301 50.000 0.00 0.00 0.00 4.18
2316 2331 3.119352 GCAAATCCACCAAAGACAGATCC 60.119 47.826 0.00 0.00 0.00 3.36
2317 2332 3.760684 AGCAAATCCACCAAAGACAGATC 59.239 43.478 0.00 0.00 0.00 2.75
2318 2333 3.760684 GAGCAAATCCACCAAAGACAGAT 59.239 43.478 0.00 0.00 0.00 2.90
2319 2334 3.149196 GAGCAAATCCACCAAAGACAGA 58.851 45.455 0.00 0.00 0.00 3.41
2320 2335 2.095567 CGAGCAAATCCACCAAAGACAG 60.096 50.000 0.00 0.00 0.00 3.51
2321 2336 1.879380 CGAGCAAATCCACCAAAGACA 59.121 47.619 0.00 0.00 0.00 3.41
2322 2337 1.200020 CCGAGCAAATCCACCAAAGAC 59.800 52.381 0.00 0.00 0.00 3.01
2323 2338 1.073125 TCCGAGCAAATCCACCAAAGA 59.927 47.619 0.00 0.00 0.00 2.52
2324 2339 1.533625 TCCGAGCAAATCCACCAAAG 58.466 50.000 0.00 0.00 0.00 2.77
2325 2340 2.091541 GATCCGAGCAAATCCACCAAA 58.908 47.619 0.00 0.00 0.00 3.28
2326 2341 1.281867 AGATCCGAGCAAATCCACCAA 59.718 47.619 0.00 0.00 0.00 3.67
2327 2342 0.911769 AGATCCGAGCAAATCCACCA 59.088 50.000 0.00 0.00 0.00 4.17
2328 2343 1.303309 CAGATCCGAGCAAATCCACC 58.697 55.000 0.00 0.00 0.00 4.61
2329 2344 2.029838 ACAGATCCGAGCAAATCCAC 57.970 50.000 0.00 0.00 0.00 4.02
2330 2345 2.632377 GAACAGATCCGAGCAAATCCA 58.368 47.619 0.00 0.00 0.00 3.41
2331 2346 1.594862 CGAACAGATCCGAGCAAATCC 59.405 52.381 0.00 0.00 0.00 3.01
2332 2347 2.271800 ACGAACAGATCCGAGCAAATC 58.728 47.619 0.00 0.00 0.00 2.17
2333 2348 2.271800 GACGAACAGATCCGAGCAAAT 58.728 47.619 0.00 0.00 0.00 2.32
2334 2349 1.710013 GACGAACAGATCCGAGCAAA 58.290 50.000 0.00 0.00 0.00 3.68
2335 2350 0.456142 CGACGAACAGATCCGAGCAA 60.456 55.000 0.00 0.00 0.00 3.91
2336 2351 1.136774 CGACGAACAGATCCGAGCA 59.863 57.895 0.00 0.00 0.00 4.26
2337 2352 0.456312 AACGACGAACAGATCCGAGC 60.456 55.000 0.00 0.00 0.00 5.03
2338 2353 1.536149 GAACGACGAACAGATCCGAG 58.464 55.000 0.00 0.00 0.00 4.63
2339 2354 0.179207 CGAACGACGAACAGATCCGA 60.179 55.000 0.00 0.00 45.77 4.55
2340 2355 0.453950 ACGAACGACGAACAGATCCG 60.454 55.000 0.00 0.00 45.77 4.18
2341 2356 1.135746 AGACGAACGACGAACAGATCC 60.136 52.381 0.00 0.00 45.77 3.36
2342 2357 2.244281 AGACGAACGACGAACAGATC 57.756 50.000 0.00 0.00 45.77 2.75
2343 2358 2.582687 GAAGACGAACGACGAACAGAT 58.417 47.619 0.00 0.00 45.77 2.90
2344 2359 1.658373 CGAAGACGAACGACGAACAGA 60.658 52.381 0.00 0.00 45.77 3.41
2345 2360 0.695943 CGAAGACGAACGACGAACAG 59.304 55.000 0.00 0.00 45.77 3.16
2346 2361 0.027979 ACGAAGACGAACGACGAACA 59.972 50.000 0.00 0.00 45.77 3.18
2347 2362 2.775847 ACGAAGACGAACGACGAAC 58.224 52.632 0.00 0.00 45.77 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.