Multiple sequence alignment - TraesCS5A01G015200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G015200 chr5A 100.000 2240 0 0 1 2240 10836645 10834406 0.000000e+00 4137
1 TraesCS5A01G015200 chr5A 96.552 435 15 0 1806 2240 697709372 697708938 0.000000e+00 721
2 TraesCS5A01G015200 chr5A 85.358 321 41 5 1239 1559 10857101 10856787 5.960000e-86 327
3 TraesCS5A01G015200 chr5A 97.674 43 1 0 1766 1808 10874729 10874687 8.580000e-10 75
4 TraesCS5A01G015200 chr5B 91.207 671 33 7 837 1505 13225408 13224762 0.000000e+00 889
5 TraesCS5A01G015200 chr5B 85.179 641 54 19 5 642 13226177 13225575 8.790000e-174 619
6 TraesCS5A01G015200 chr5D 88.599 728 48 11 837 1559 13811857 13811160 0.000000e+00 852
7 TraesCS5A01G015200 chr5D 91.500 600 27 5 837 1429 13790018 13789436 0.000000e+00 804
8 TraesCS5A01G015200 chr5D 83.588 719 68 30 5 703 13812673 13811985 1.460000e-176 628
9 TraesCS5A01G015200 chr5D 90.148 406 29 7 299 696 13790553 13790151 3.300000e-143 518
10 TraesCS5A01G015200 chr7A 97.011 435 13 0 1806 2240 732058879 732058445 0.000000e+00 732
11 TraesCS5A01G015200 chr2A 97.005 434 12 1 1806 2239 58483936 58484368 0.000000e+00 728
12 TraesCS5A01G015200 chr2A 96.782 435 14 0 1806 2240 607402130 607401696 0.000000e+00 726
13 TraesCS5A01G015200 chr2A 96.782 435 13 1 1806 2240 744894003 744894436 0.000000e+00 725
14 TraesCS5A01G015200 chr2A 96.552 435 15 0 1806 2240 319017019 319017453 0.000000e+00 721
15 TraesCS5A01G015200 chr2A 96.552 435 15 0 1806 2240 710360713 710361147 0.000000e+00 721
16 TraesCS5A01G015200 chr1B 96.560 436 14 1 1806 2240 26839851 26840286 0.000000e+00 721
17 TraesCS5A01G015200 chr1B 92.417 211 13 1 1587 1794 566027964 566028174 4.680000e-77 298
18 TraesCS5A01G015200 chr7B 96.544 434 15 0 1806 2239 635018155 635017722 0.000000e+00 719
19 TraesCS5A01G015200 chr2B 84.381 525 43 18 14 537 483994607 483995093 1.560000e-131 479
20 TraesCS5A01G015200 chr3D 88.110 328 27 8 912 1236 274727698 274728016 1.620000e-101 379
21 TraesCS5A01G015200 chr3A 87.613 331 26 5 912 1236 365966148 365966469 9.770000e-99 370
22 TraesCS5A01G015200 chr3A 92.788 208 15 0 1587 1794 42138967 42139174 3.620000e-78 302
23 TraesCS5A01G015200 chr3A 92.308 208 15 1 1587 1794 42080881 42081087 6.050000e-76 294
24 TraesCS5A01G015200 chr3A 92.308 208 15 1 1587 1794 42110056 42110262 6.050000e-76 294
25 TraesCS5A01G015200 chr6A 97.115 208 6 0 1587 1794 48643698 48643491 3.540000e-93 351
26 TraesCS5A01G015200 chr3B 86.103 331 31 7 912 1236 367480209 367480530 2.130000e-90 342
27 TraesCS5A01G015200 chr4A 95.673 208 9 0 1587 1794 585233277 585233484 3.560000e-88 335
28 TraesCS5A01G015200 chr1D 79.655 290 42 12 335 619 376863960 376864237 2.270000e-45 193


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G015200 chr5A 10834406 10836645 2239 True 4137 4137 100.0000 1 2240 1 chr5A.!!$R1 2239
1 TraesCS5A01G015200 chr5B 13224762 13226177 1415 True 754 889 88.1930 5 1505 2 chr5B.!!$R1 1500
2 TraesCS5A01G015200 chr5D 13811160 13812673 1513 True 740 852 86.0935 5 1559 2 chr5D.!!$R2 1554
3 TraesCS5A01G015200 chr5D 13789436 13790553 1117 True 661 804 90.8240 299 1429 2 chr5D.!!$R1 1130

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
896 995 0.8951 TTCAGGTTGGGTCATGCTGC 60.895 55.0 0.0 0.0 0.0 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2217 2329 0.031994 GCGAGCTCTTCCTCCTCATC 59.968 60.0 12.85 0.0 0.0 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 1.138247 CTGCGATTTTCCTGCTGCC 59.862 57.895 0.00 0.00 0.00 4.85
33 34 2.050714 CTGCTGCCTTGTTGTGCG 60.051 61.111 0.00 0.00 0.00 5.34
55 56 5.518847 GCGACACATACAAGAGTTGCTAATA 59.481 40.000 0.00 0.00 36.80 0.98
58 59 7.462856 CGACACATACAAGAGTTGCTAATACAC 60.463 40.741 0.00 0.00 0.00 2.90
62 63 7.824289 ACATACAAGAGTTGCTAATACACATGT 59.176 33.333 0.00 0.00 0.00 3.21
71 72 9.326413 AGTTGCTAATACACATGTTTATAGGTC 57.674 33.333 4.97 0.00 0.00 3.85
86 87 1.747709 AGGTCTGCTGCATGTGAATC 58.252 50.000 1.31 0.00 0.00 2.52
96 97 4.320714 GCTGCATGTGAATCTTGTTCTGAA 60.321 41.667 0.00 0.00 0.00 3.02
106 107 4.430137 TCTTGTTCTGAATGCTGATTGC 57.570 40.909 0.00 0.00 43.25 3.56
108 109 3.842732 TGTTCTGAATGCTGATTGCTG 57.157 42.857 0.00 0.00 43.37 4.41
110 111 4.014406 TGTTCTGAATGCTGATTGCTGAT 58.986 39.130 0.00 0.00 43.37 2.90
111 112 4.461431 TGTTCTGAATGCTGATTGCTGATT 59.539 37.500 0.00 0.00 43.37 2.57
113 114 6.151480 TGTTCTGAATGCTGATTGCTGATTAA 59.849 34.615 0.00 0.00 43.37 1.40
114 115 6.373186 TCTGAATGCTGATTGCTGATTAAG 57.627 37.500 0.00 0.00 43.37 1.85
115 116 6.117488 TCTGAATGCTGATTGCTGATTAAGA 58.883 36.000 0.00 0.00 43.37 2.10
116 117 6.600427 TCTGAATGCTGATTGCTGATTAAGAA 59.400 34.615 0.00 0.00 43.37 2.52
117 118 7.121611 TCTGAATGCTGATTGCTGATTAAGAAA 59.878 33.333 0.00 0.00 43.37 2.52
118 119 7.255569 TGAATGCTGATTGCTGATTAAGAAAG 58.744 34.615 0.00 0.00 43.37 2.62
119 120 5.571784 TGCTGATTGCTGATTAAGAAAGG 57.428 39.130 0.00 0.00 43.37 3.11
120 121 4.400251 TGCTGATTGCTGATTAAGAAAGGG 59.600 41.667 0.00 0.00 43.37 3.95
121 122 4.641989 GCTGATTGCTGATTAAGAAAGGGA 59.358 41.667 0.00 0.00 38.95 4.20
122 123 5.221009 GCTGATTGCTGATTAAGAAAGGGAG 60.221 44.000 0.00 0.00 38.95 4.30
147 148 3.360867 CACGGCTGGGAGATAGATAGAT 58.639 50.000 0.00 0.00 0.00 1.98
150 151 4.475381 ACGGCTGGGAGATAGATAGATAGA 59.525 45.833 0.00 0.00 0.00 1.98
155 156 6.260700 TGGGAGATAGATAGATAGAGAGGC 57.739 45.833 0.00 0.00 0.00 4.70
174 175 3.090656 CTGATGCTGACTGCTGCG 58.909 61.111 5.87 0.00 43.37 5.18
198 200 6.128172 CGTTTTCTTCTCTGGATATTGCAACT 60.128 38.462 0.00 0.00 0.00 3.16
208 210 4.168760 GGATATTGCAACTGCTGTTTGTC 58.831 43.478 0.00 0.74 42.66 3.18
210 212 2.849880 TTGCAACTGCTGTTTGTCTC 57.150 45.000 6.20 0.00 42.66 3.36
220 222 2.222911 GCTGTTTGTCTCTCTGCTTCAC 59.777 50.000 0.00 0.00 0.00 3.18
222 224 1.795286 GTTTGTCTCTCTGCTTCACGG 59.205 52.381 0.00 0.00 0.00 4.94
225 227 1.895798 TGTCTCTCTGCTTCACGGAAT 59.104 47.619 0.00 0.00 31.65 3.01
226 228 3.089284 TGTCTCTCTGCTTCACGGAATA 58.911 45.455 0.00 0.00 31.65 1.75
227 229 3.129462 TGTCTCTCTGCTTCACGGAATAG 59.871 47.826 0.00 0.00 31.65 1.73
228 230 3.378742 GTCTCTCTGCTTCACGGAATAGA 59.621 47.826 0.00 0.00 31.65 1.98
229 231 3.629855 TCTCTCTGCTTCACGGAATAGAG 59.370 47.826 14.72 14.72 35.76 2.43
230 232 3.621558 TCTCTGCTTCACGGAATAGAGA 58.378 45.455 17.13 17.13 38.36 3.10
231 233 3.629855 TCTCTGCTTCACGGAATAGAGAG 59.370 47.826 17.13 13.00 37.12 3.20
232 234 3.621558 TCTGCTTCACGGAATAGAGAGA 58.378 45.455 0.00 0.00 0.00 3.10
233 235 3.629855 TCTGCTTCACGGAATAGAGAGAG 59.370 47.826 0.00 0.00 0.00 3.20
234 236 3.621558 TGCTTCACGGAATAGAGAGAGA 58.378 45.455 0.00 0.00 0.00 3.10
235 237 3.378742 TGCTTCACGGAATAGAGAGAGAC 59.621 47.826 0.00 0.00 0.00 3.36
236 238 3.378742 GCTTCACGGAATAGAGAGAGACA 59.621 47.826 0.00 0.00 0.00 3.41
264 266 8.753133 TGAGAGAGACTGCTCATATAAAGAAAA 58.247 33.333 0.00 0.00 43.81 2.29
265 267 9.248291 GAGAGAGACTGCTCATATAAAGAAAAG 57.752 37.037 0.00 0.00 43.81 2.27
266 268 8.976353 AGAGAGACTGCTCATATAAAGAAAAGA 58.024 33.333 0.00 0.00 43.81 2.52
267 269 9.248291 GAGAGACTGCTCATATAAAGAAAAGAG 57.752 37.037 0.00 0.00 43.81 2.85
268 270 8.976353 AGAGACTGCTCATATAAAGAAAAGAGA 58.024 33.333 0.00 0.00 43.81 3.10
271 295 9.762933 GACTGCTCATATAAAGAAAAGAGAGAT 57.237 33.333 0.00 0.00 0.00 2.75
286 310 7.475771 AAAGAGAGATATTGCGAGAAATGTC 57.524 36.000 0.00 0.00 0.00 3.06
397 424 6.321181 ACTTTTACTCATCCTTGCACTTTGAA 59.679 34.615 0.00 0.00 0.00 2.69
408 437 6.534793 TCCTTGCACTTTGAATTTTGACTTTC 59.465 34.615 0.00 0.00 0.00 2.62
436 465 5.535030 AGTGAAGAAAAACATTGGGGACTAC 59.465 40.000 0.00 0.00 0.00 2.73
453 482 2.867368 ACTACGTAGTCTGAGATGCTCG 59.133 50.000 22.45 0.00 43.93 5.03
454 483 1.740297 ACGTAGTCTGAGATGCTCGT 58.260 50.000 0.00 0.00 29.74 4.18
455 484 1.398739 ACGTAGTCTGAGATGCTCGTG 59.601 52.381 0.00 0.00 29.74 4.35
456 485 1.833860 GTAGTCTGAGATGCTCGTGC 58.166 55.000 1.71 1.71 40.20 5.34
467 496 1.229428 TGCTCGTGCCTTCTTTCTTG 58.771 50.000 7.05 0.00 38.71 3.02
471 500 3.062774 GCTCGTGCCTTCTTTCTTGTATC 59.937 47.826 0.00 0.00 0.00 2.24
472 501 3.250744 TCGTGCCTTCTTTCTTGTATCG 58.749 45.455 0.00 0.00 0.00 2.92
497 530 9.974750 CGTAATTTGGTTATTTGTTTGTTTGTT 57.025 25.926 0.00 0.00 0.00 2.83
628 663 4.820173 ACCCTTGAAGTTCTTAACCTTTCG 59.180 41.667 4.17 0.00 0.00 3.46
643 702 9.719279 CTTAACCTTTCGTTATTGTTTTGTACA 57.281 29.630 0.00 0.00 36.81 2.90
663 722 7.724305 GTACAATTAACTTGGACAGTCAAGA 57.276 36.000 15.56 0.00 46.44 3.02
665 724 5.765182 ACAATTAACTTGGACAGTCAAGAGG 59.235 40.000 15.56 0.00 44.98 3.69
670 729 5.367945 ACTTGGACAGTCAAGAGGTTTTA 57.632 39.130 15.56 0.00 44.98 1.52
681 740 9.007901 CAGTCAAGAGGTTTTATTTTCTCTGAT 57.992 33.333 0.00 0.00 36.78 2.90
708 767 3.799281 ACTCTGCTTATGACTCTGAGC 57.201 47.619 4.19 0.00 35.74 4.26
709 768 3.364549 ACTCTGCTTATGACTCTGAGCT 58.635 45.455 4.19 0.00 36.16 4.09
710 769 3.130869 ACTCTGCTTATGACTCTGAGCTG 59.869 47.826 4.19 0.00 36.16 4.24
711 770 3.359950 TCTGCTTATGACTCTGAGCTGA 58.640 45.455 4.19 0.00 39.65 4.26
712 771 3.766051 TCTGCTTATGACTCTGAGCTGAA 59.234 43.478 4.19 0.00 39.21 3.02
713 772 4.114073 CTGCTTATGACTCTGAGCTGAAG 58.886 47.826 4.19 4.93 36.54 3.02
714 773 2.865551 GCTTATGACTCTGAGCTGAAGC 59.134 50.000 14.39 14.39 42.49 3.86
715 774 3.678252 GCTTATGACTCTGAGCTGAAGCA 60.678 47.826 20.28 6.43 45.16 3.91
716 775 4.695396 CTTATGACTCTGAGCTGAAGCAT 58.305 43.478 4.19 2.48 45.16 3.79
717 776 3.630892 ATGACTCTGAGCTGAAGCATT 57.369 42.857 4.19 0.00 45.16 3.56
718 777 2.696506 TGACTCTGAGCTGAAGCATTG 58.303 47.619 4.19 0.00 45.16 2.82
719 778 2.038164 TGACTCTGAGCTGAAGCATTGT 59.962 45.455 4.19 0.00 45.16 2.71
720 779 3.259123 TGACTCTGAGCTGAAGCATTGTA 59.741 43.478 4.19 0.00 45.16 2.41
721 780 3.594134 ACTCTGAGCTGAAGCATTGTAC 58.406 45.455 4.19 0.00 45.16 2.90
722 781 3.260380 ACTCTGAGCTGAAGCATTGTACT 59.740 43.478 4.19 0.00 45.16 2.73
723 782 3.593096 TCTGAGCTGAAGCATTGTACTG 58.407 45.455 4.90 0.00 45.16 2.74
724 783 2.079158 TGAGCTGAAGCATTGTACTGC 58.921 47.619 4.90 0.00 45.16 4.40
739 798 2.021355 ACTGCTTATGACTCTGCTGC 57.979 50.000 0.00 0.00 0.00 5.25
758 817 3.071479 TGCCTTTTGACTTCCGTATGTC 58.929 45.455 0.00 0.00 0.00 3.06
803 872 1.860676 AACATAGCGTTGTGTGTCGT 58.139 45.000 1.80 0.00 36.12 4.34
811 881 1.552226 GTTGTGTGTCGTTCGTCTGA 58.448 50.000 0.00 0.00 0.00 3.27
892 991 3.118775 TCGTAGATTCAGGTTGGGTCATG 60.119 47.826 0.00 0.00 0.00 3.07
893 992 2.134789 AGATTCAGGTTGGGTCATGC 57.865 50.000 0.00 0.00 0.00 4.06
894 993 1.637553 AGATTCAGGTTGGGTCATGCT 59.362 47.619 0.00 0.00 0.00 3.79
895 994 1.747355 GATTCAGGTTGGGTCATGCTG 59.253 52.381 0.00 0.00 0.00 4.41
896 995 0.895100 TTCAGGTTGGGTCATGCTGC 60.895 55.000 0.00 0.00 0.00 5.25
897 996 1.303888 CAGGTTGGGTCATGCTGCT 60.304 57.895 0.00 0.00 0.00 4.24
905 1004 2.025981 TGGGTCATGCTGCTTCATAACT 60.026 45.455 0.00 0.00 0.00 2.24
919 1018 9.766277 CTGCTTCATAACTCTCTTTATGTTTTC 57.234 33.333 3.46 0.00 39.52 2.29
955 1054 6.560253 ACTAGTGTTACAAGCCTTTTGATG 57.440 37.500 0.00 0.00 0.00 3.07
957 1056 6.942576 ACTAGTGTTACAAGCCTTTTGATGAT 59.057 34.615 0.00 0.00 0.00 2.45
958 1057 6.259550 AGTGTTACAAGCCTTTTGATGATC 57.740 37.500 0.00 0.00 0.00 2.92
959 1058 6.006449 AGTGTTACAAGCCTTTTGATGATCT 58.994 36.000 0.00 0.00 0.00 2.75
960 1059 6.072286 AGTGTTACAAGCCTTTTGATGATCTG 60.072 38.462 0.00 0.00 0.00 2.90
961 1060 6.003326 TGTTACAAGCCTTTTGATGATCTGA 58.997 36.000 0.00 0.00 0.00 3.27
962 1061 6.660521 TGTTACAAGCCTTTTGATGATCTGAT 59.339 34.615 0.00 0.00 0.00 2.90
963 1062 5.831702 ACAAGCCTTTTGATGATCTGATC 57.168 39.130 10.72 10.72 0.00 2.92
964 1063 5.258841 ACAAGCCTTTTGATGATCTGATCA 58.741 37.500 21.55 21.55 44.55 2.92
965 1064 5.713389 ACAAGCCTTTTGATGATCTGATCAA 59.287 36.000 22.91 6.20 43.50 2.57
977 1076 7.819415 TGATGATCTGATCAAAACTCGTACTTT 59.181 33.333 22.91 3.09 43.50 2.66
1131 1230 5.120830 CAGTACAATGCTTCAGTTCTACACC 59.879 44.000 0.00 0.00 0.00 4.16
1221 1320 2.799207 CGTTGCTGTGCTCCATGTTTTT 60.799 45.455 0.00 0.00 0.00 1.94
1230 1329 2.680577 CTCCATGTTTTTGGCAAGCTC 58.319 47.619 0.00 0.00 36.66 4.09
1294 1393 9.725206 AGAGGAACCCATAGACTTAAATAACTA 57.275 33.333 0.00 0.00 0.00 2.24
1301 1400 9.654663 CCCATAGACTTAAATAACTACATAGCC 57.345 37.037 0.00 0.00 0.00 3.93
1306 1405 9.561069 AGACTTAAATAACTACATAGCCAATGG 57.439 33.333 0.00 0.00 40.16 3.16
1327 1431 2.801342 GCTGTCGGATCCTGAAGACATC 60.801 54.545 17.34 11.55 41.92 3.06
1330 1434 1.950216 TCGGATCCTGAAGACATCTCG 59.050 52.381 10.75 0.00 0.00 4.04
1415 1525 1.005748 GCAAGAAGGTGCTTTGGCC 60.006 57.895 0.00 0.00 41.51 5.36
1421 1531 0.825010 AAGGTGCTTTGGCCTGTCAG 60.825 55.000 3.32 0.00 37.74 3.51
1468 1578 1.515521 CCTGGGTCCGTGCTTTGTTC 61.516 60.000 0.00 0.00 0.00 3.18
1494 1606 6.468333 AATATGTTGCATACAAGCCATTGA 57.532 33.333 5.94 0.00 40.89 2.57
1505 1617 8.950210 GCATACAAGCCATTGATGTAGTATTAT 58.050 33.333 0.00 0.00 38.83 1.28
1527 1639 6.821616 ATAGATTGGTTCCTGAGTCTGAAT 57.178 37.500 0.00 0.00 0.00 2.57
1528 1640 5.096443 AGATTGGTTCCTGAGTCTGAATC 57.904 43.478 0.00 0.00 0.00 2.52
1541 1653 6.064060 TGAGTCTGAATCAAATGTTCTGGTT 58.936 36.000 5.19 0.00 0.00 3.67
1544 1656 3.899734 TGAATCAAATGTTCTGGTTGCG 58.100 40.909 0.00 0.00 0.00 4.85
1550 1662 5.038033 TCAAATGTTCTGGTTGCGTAAAAC 58.962 37.500 0.00 0.00 0.00 2.43
1559 1671 4.789784 TGGTTGCGTAAAACTTATGCTTC 58.210 39.130 10.93 5.21 0.00 3.86
1560 1672 4.163552 GGTTGCGTAAAACTTATGCTTCC 58.836 43.478 10.93 9.29 0.00 3.46
1561 1673 4.163552 GTTGCGTAAAACTTATGCTTCCC 58.836 43.478 10.93 0.00 0.00 3.97
1562 1674 3.413327 TGCGTAAAACTTATGCTTCCCA 58.587 40.909 10.93 0.00 0.00 4.37
1563 1675 3.821600 TGCGTAAAACTTATGCTTCCCAA 59.178 39.130 10.93 0.00 0.00 4.12
1564 1676 4.278669 TGCGTAAAACTTATGCTTCCCAAA 59.721 37.500 10.93 0.00 0.00 3.28
1565 1677 5.047660 TGCGTAAAACTTATGCTTCCCAAAT 60.048 36.000 10.93 0.00 0.00 2.32
1566 1678 5.515270 GCGTAAAACTTATGCTTCCCAAATC 59.485 40.000 3.83 0.00 0.00 2.17
1567 1679 6.625081 GCGTAAAACTTATGCTTCCCAAATCT 60.625 38.462 3.83 0.00 0.00 2.40
1568 1680 6.967199 CGTAAAACTTATGCTTCCCAAATCTC 59.033 38.462 0.00 0.00 0.00 2.75
1569 1681 7.148239 CGTAAAACTTATGCTTCCCAAATCTCT 60.148 37.037 0.00 0.00 0.00 3.10
1570 1682 6.521151 AAACTTATGCTTCCCAAATCTCTG 57.479 37.500 0.00 0.00 0.00 3.35
1571 1683 5.441718 ACTTATGCTTCCCAAATCTCTGA 57.558 39.130 0.00 0.00 0.00 3.27
1572 1684 5.819991 ACTTATGCTTCCCAAATCTCTGAA 58.180 37.500 0.00 0.00 0.00 3.02
1573 1685 5.884792 ACTTATGCTTCCCAAATCTCTGAAG 59.115 40.000 0.00 0.00 37.78 3.02
1574 1686 3.795688 TGCTTCCCAAATCTCTGAAGT 57.204 42.857 0.00 0.00 37.21 3.01
1575 1687 3.415212 TGCTTCCCAAATCTCTGAAGTG 58.585 45.455 0.00 0.00 37.21 3.16
1576 1688 3.181440 TGCTTCCCAAATCTCTGAAGTGT 60.181 43.478 0.00 0.00 37.21 3.55
1577 1689 3.190118 GCTTCCCAAATCTCTGAAGTGTG 59.810 47.826 0.00 0.00 37.21 3.82
1578 1690 4.645535 CTTCCCAAATCTCTGAAGTGTGA 58.354 43.478 0.00 0.00 31.71 3.58
1579 1691 4.916041 TCCCAAATCTCTGAAGTGTGAT 57.084 40.909 0.00 0.00 0.00 3.06
1580 1692 5.246981 TCCCAAATCTCTGAAGTGTGATT 57.753 39.130 0.00 0.00 0.00 2.57
1581 1693 5.634118 TCCCAAATCTCTGAAGTGTGATTT 58.366 37.500 0.00 0.00 38.99 2.17
1583 1695 5.242393 CCCAAATCTCTGAAGTGTGATTTGT 59.758 40.000 19.37 0.00 46.73 2.83
1584 1696 6.430925 CCCAAATCTCTGAAGTGTGATTTGTA 59.569 38.462 19.37 0.00 46.73 2.41
1585 1697 7.040478 CCCAAATCTCTGAAGTGTGATTTGTAA 60.040 37.037 19.37 0.00 46.73 2.41
1586 1698 7.805071 CCAAATCTCTGAAGTGTGATTTGTAAC 59.195 37.037 19.37 0.00 46.73 2.50
1587 1699 6.712241 ATCTCTGAAGTGTGATTTGTAACG 57.288 37.500 0.00 0.00 0.00 3.18
1588 1700 5.838529 TCTCTGAAGTGTGATTTGTAACGA 58.161 37.500 0.00 0.00 0.00 3.85
1589 1701 6.277605 TCTCTGAAGTGTGATTTGTAACGAA 58.722 36.000 0.00 0.00 0.00 3.85
1590 1702 6.759356 TCTCTGAAGTGTGATTTGTAACGAAA 59.241 34.615 0.00 0.00 0.00 3.46
1591 1703 6.943981 TCTGAAGTGTGATTTGTAACGAAAG 58.056 36.000 0.00 0.00 0.00 2.62
1609 1721 2.125147 TGCATAGGAGCACACCGC 60.125 61.111 0.00 0.00 40.11 5.68
1626 1738 3.691342 CGACGCTCCCCACTGGAA 61.691 66.667 0.00 0.00 44.57 3.53
1627 1739 2.990479 GACGCTCCCCACTGGAAT 59.010 61.111 0.00 0.00 44.57 3.01
1628 1740 1.153349 GACGCTCCCCACTGGAATC 60.153 63.158 0.00 0.00 44.57 2.52
1629 1741 2.190578 CGCTCCCCACTGGAATCC 59.809 66.667 0.00 0.00 44.57 3.01
1630 1742 2.370445 CGCTCCCCACTGGAATCCT 61.370 63.158 0.00 0.00 44.57 3.24
1631 1743 1.048724 CGCTCCCCACTGGAATCCTA 61.049 60.000 0.00 0.00 44.57 2.94
1632 1744 1.439543 GCTCCCCACTGGAATCCTAT 58.560 55.000 0.00 0.00 44.57 2.57
1633 1745 1.349357 GCTCCCCACTGGAATCCTATC 59.651 57.143 0.00 0.00 44.57 2.08
1634 1746 2.983296 CTCCCCACTGGAATCCTATCT 58.017 52.381 0.00 0.00 44.57 1.98
1635 1747 3.758787 GCTCCCCACTGGAATCCTATCTA 60.759 52.174 0.00 0.00 44.57 1.98
1636 1748 4.693420 CTCCCCACTGGAATCCTATCTAT 58.307 47.826 0.00 0.00 44.57 1.98
1637 1749 4.689062 TCCCCACTGGAATCCTATCTATC 58.311 47.826 0.00 0.00 41.40 2.08
1638 1750 3.777522 CCCCACTGGAATCCTATCTATCC 59.222 52.174 0.00 0.00 35.39 2.59
1639 1751 4.429505 CCCACTGGAATCCTATCTATCCA 58.570 47.826 0.00 0.00 39.57 3.41
1640 1752 5.035556 CCCACTGGAATCCTATCTATCCAT 58.964 45.833 0.00 0.00 40.94 3.41
1641 1753 5.490357 CCCACTGGAATCCTATCTATCCATT 59.510 44.000 0.00 0.00 40.94 3.16
1642 1754 6.012157 CCCACTGGAATCCTATCTATCCATTT 60.012 42.308 0.00 0.00 40.94 2.32
1643 1755 6.883217 CCACTGGAATCCTATCTATCCATTTG 59.117 42.308 0.00 0.00 40.94 2.32
1644 1756 7.456725 CACTGGAATCCTATCTATCCATTTGT 58.543 38.462 0.00 0.00 40.94 2.83
1645 1757 7.605691 CACTGGAATCCTATCTATCCATTTGTC 59.394 40.741 0.00 0.00 40.94 3.18
1646 1758 7.515514 ACTGGAATCCTATCTATCCATTTGTCT 59.484 37.037 0.00 0.00 40.94 3.41
1647 1759 8.280258 TGGAATCCTATCTATCCATTTGTCTT 57.720 34.615 0.00 0.00 37.05 3.01
1648 1760 8.159447 TGGAATCCTATCTATCCATTTGTCTTG 58.841 37.037 0.00 0.00 37.05 3.02
1649 1761 7.609532 GGAATCCTATCTATCCATTTGTCTTGG 59.390 40.741 0.00 0.00 35.45 3.61
1650 1762 6.439636 TCCTATCTATCCATTTGTCTTGGG 57.560 41.667 0.00 0.00 34.85 4.12
1651 1763 6.150332 TCCTATCTATCCATTTGTCTTGGGA 58.850 40.000 0.00 0.00 34.85 4.37
1652 1764 6.794493 TCCTATCTATCCATTTGTCTTGGGAT 59.206 38.462 0.00 0.00 42.55 3.85
1653 1765 7.038017 TCCTATCTATCCATTTGTCTTGGGATC 60.038 40.741 0.00 0.00 40.49 3.36
1654 1766 6.776887 ATCTATCCATTTGTCTTGGGATCT 57.223 37.500 0.00 0.00 40.49 2.75
1655 1767 6.581388 TCTATCCATTTGTCTTGGGATCTT 57.419 37.500 0.00 0.00 40.49 2.40
1656 1768 6.595682 TCTATCCATTTGTCTTGGGATCTTC 58.404 40.000 0.00 0.00 40.49 2.87
1657 1769 4.656100 TCCATTTGTCTTGGGATCTTCA 57.344 40.909 0.00 0.00 34.85 3.02
1658 1770 4.996793 TCCATTTGTCTTGGGATCTTCAA 58.003 39.130 0.00 0.00 34.85 2.69
1659 1771 4.766891 TCCATTTGTCTTGGGATCTTCAAC 59.233 41.667 0.00 0.00 34.85 3.18
1660 1772 4.082026 CCATTTGTCTTGGGATCTTCAACC 60.082 45.833 0.00 0.00 0.00 3.77
1661 1773 3.874383 TTGTCTTGGGATCTTCAACCA 57.126 42.857 0.00 0.00 0.00 3.67
1662 1774 3.140325 TGTCTTGGGATCTTCAACCAC 57.860 47.619 0.00 0.00 33.20 4.16
1663 1775 2.711009 TGTCTTGGGATCTTCAACCACT 59.289 45.455 0.00 0.00 33.20 4.00
1664 1776 3.907474 TGTCTTGGGATCTTCAACCACTA 59.093 43.478 0.00 0.00 33.20 2.74
1665 1777 4.536090 TGTCTTGGGATCTTCAACCACTAT 59.464 41.667 0.00 0.00 33.20 2.12
1666 1778 5.724370 TGTCTTGGGATCTTCAACCACTATA 59.276 40.000 0.00 0.00 33.20 1.31
1667 1779 6.386927 TGTCTTGGGATCTTCAACCACTATAT 59.613 38.462 0.00 0.00 33.20 0.86
1668 1780 7.092444 TGTCTTGGGATCTTCAACCACTATATT 60.092 37.037 0.00 0.00 33.20 1.28
1669 1781 8.429641 GTCTTGGGATCTTCAACCACTATATTA 58.570 37.037 0.00 0.00 33.20 0.98
1670 1782 8.651389 TCTTGGGATCTTCAACCACTATATTAG 58.349 37.037 0.00 0.00 33.20 1.73
1671 1783 6.769512 TGGGATCTTCAACCACTATATTAGC 58.230 40.000 0.00 0.00 0.00 3.09
1672 1784 6.558775 TGGGATCTTCAACCACTATATTAGCT 59.441 38.462 0.00 0.00 0.00 3.32
1673 1785 7.733047 TGGGATCTTCAACCACTATATTAGCTA 59.267 37.037 0.00 0.00 0.00 3.32
1674 1786 8.035984 GGGATCTTCAACCACTATATTAGCTAC 58.964 40.741 0.00 0.00 0.00 3.58
1675 1787 7.755822 GGATCTTCAACCACTATATTAGCTACG 59.244 40.741 0.00 0.00 0.00 3.51
1676 1788 7.578310 TCTTCAACCACTATATTAGCTACGT 57.422 36.000 0.00 0.00 0.00 3.57
1677 1789 7.646314 TCTTCAACCACTATATTAGCTACGTC 58.354 38.462 0.00 0.00 0.00 4.34
1678 1790 5.993891 TCAACCACTATATTAGCTACGTCG 58.006 41.667 0.00 0.00 0.00 5.12
1679 1791 5.528690 TCAACCACTATATTAGCTACGTCGT 59.471 40.000 2.21 2.21 0.00 4.34
1680 1792 6.705825 TCAACCACTATATTAGCTACGTCGTA 59.294 38.462 4.78 4.78 0.00 3.43
1681 1793 6.473397 ACCACTATATTAGCTACGTCGTAC 57.527 41.667 0.00 0.00 0.00 3.67
1682 1794 6.226787 ACCACTATATTAGCTACGTCGTACT 58.773 40.000 0.00 6.83 0.00 2.73
1683 1795 6.146837 ACCACTATATTAGCTACGTCGTACTG 59.853 42.308 0.00 0.00 0.00 2.74
1684 1796 6.014293 CACTATATTAGCTACGTCGTACTGC 58.986 44.000 0.00 4.77 0.00 4.40
1685 1797 5.698089 ACTATATTAGCTACGTCGTACTGCA 59.302 40.000 16.21 0.00 0.00 4.41
1686 1798 3.770263 ATTAGCTACGTCGTACTGCAA 57.230 42.857 16.21 10.05 0.00 4.08
1687 1799 3.557577 TTAGCTACGTCGTACTGCAAA 57.442 42.857 16.21 4.24 0.00 3.68
1688 1800 1.694639 AGCTACGTCGTACTGCAAAC 58.305 50.000 16.21 0.00 0.00 2.93
1689 1801 1.268899 AGCTACGTCGTACTGCAAACT 59.731 47.619 16.21 0.00 0.00 2.66
1690 1802 2.056577 GCTACGTCGTACTGCAAACTT 58.943 47.619 10.74 0.00 0.00 2.66
1691 1803 3.058016 AGCTACGTCGTACTGCAAACTTA 60.058 43.478 16.21 0.00 0.00 2.24
1692 1804 3.855950 GCTACGTCGTACTGCAAACTTAT 59.144 43.478 10.74 0.00 0.00 1.73
1693 1805 4.027864 GCTACGTCGTACTGCAAACTTATC 60.028 45.833 10.74 0.00 0.00 1.75
1694 1806 3.904571 ACGTCGTACTGCAAACTTATCA 58.095 40.909 0.00 0.00 0.00 2.15
1695 1807 4.491676 ACGTCGTACTGCAAACTTATCAT 58.508 39.130 0.00 0.00 0.00 2.45
1696 1808 4.561606 ACGTCGTACTGCAAACTTATCATC 59.438 41.667 0.00 0.00 0.00 2.92
1697 1809 4.561213 CGTCGTACTGCAAACTTATCATCA 59.439 41.667 0.00 0.00 0.00 3.07
1698 1810 5.232202 CGTCGTACTGCAAACTTATCATCAT 59.768 40.000 0.00 0.00 0.00 2.45
1699 1811 6.414079 GTCGTACTGCAAACTTATCATCATG 58.586 40.000 0.00 0.00 0.00 3.07
1700 1812 6.036083 GTCGTACTGCAAACTTATCATCATGT 59.964 38.462 0.00 0.00 0.00 3.21
1701 1813 7.222031 GTCGTACTGCAAACTTATCATCATGTA 59.778 37.037 0.00 0.00 0.00 2.29
1702 1814 7.926018 TCGTACTGCAAACTTATCATCATGTAT 59.074 33.333 0.00 0.00 0.00 2.29
1703 1815 8.551205 CGTACTGCAAACTTATCATCATGTATT 58.449 33.333 0.00 0.00 0.00 1.89
1704 1816 9.869844 GTACTGCAAACTTATCATCATGTATTC 57.130 33.333 0.00 0.00 0.00 1.75
1705 1817 8.743085 ACTGCAAACTTATCATCATGTATTCT 57.257 30.769 0.00 0.00 0.00 2.40
1706 1818 8.834465 ACTGCAAACTTATCATCATGTATTCTC 58.166 33.333 0.00 0.00 0.00 2.87
1707 1819 8.735692 TGCAAACTTATCATCATGTATTCTCA 57.264 30.769 0.00 0.00 0.00 3.27
1708 1820 9.346005 TGCAAACTTATCATCATGTATTCTCAT 57.654 29.630 0.00 0.00 0.00 2.90
1717 1829 9.811995 ATCATCATGTATTCTCATTTGTTTTGG 57.188 29.630 0.00 0.00 0.00 3.28
1718 1830 7.760794 TCATCATGTATTCTCATTTGTTTTGGC 59.239 33.333 0.00 0.00 0.00 4.52
1719 1831 6.092092 TCATGTATTCTCATTTGTTTTGGCG 58.908 36.000 0.00 0.00 0.00 5.69
1720 1832 5.446143 TGTATTCTCATTTGTTTTGGCGT 57.554 34.783 0.00 0.00 0.00 5.68
1721 1833 6.561737 TGTATTCTCATTTGTTTTGGCGTA 57.438 33.333 0.00 0.00 0.00 4.42
1722 1834 7.151999 TGTATTCTCATTTGTTTTGGCGTAT 57.848 32.000 0.00 0.00 0.00 3.06
1723 1835 8.270080 TGTATTCTCATTTGTTTTGGCGTATA 57.730 30.769 0.00 0.00 0.00 1.47
1724 1836 8.898761 TGTATTCTCATTTGTTTTGGCGTATAT 58.101 29.630 0.00 0.00 0.00 0.86
1725 1837 9.382244 GTATTCTCATTTGTTTTGGCGTATATC 57.618 33.333 0.00 0.00 0.00 1.63
1726 1838 6.993786 TCTCATTTGTTTTGGCGTATATCA 57.006 33.333 0.00 0.00 0.00 2.15
1727 1839 7.015226 TCTCATTTGTTTTGGCGTATATCAG 57.985 36.000 0.00 0.00 0.00 2.90
1728 1840 6.597672 TCTCATTTGTTTTGGCGTATATCAGT 59.402 34.615 0.00 0.00 0.00 3.41
1729 1841 6.781138 TCATTTGTTTTGGCGTATATCAGTC 58.219 36.000 0.00 0.00 0.00 3.51
1730 1842 6.597672 TCATTTGTTTTGGCGTATATCAGTCT 59.402 34.615 0.00 0.00 0.00 3.24
1731 1843 6.811253 TTTGTTTTGGCGTATATCAGTCTT 57.189 33.333 0.00 0.00 0.00 3.01
1732 1844 6.811253 TTGTTTTGGCGTATATCAGTCTTT 57.189 33.333 0.00 0.00 0.00 2.52
1733 1845 7.908827 TTGTTTTGGCGTATATCAGTCTTTA 57.091 32.000 0.00 0.00 0.00 1.85
1734 1846 7.908827 TGTTTTGGCGTATATCAGTCTTTAA 57.091 32.000 0.00 0.00 0.00 1.52
1735 1847 8.500753 TGTTTTGGCGTATATCAGTCTTTAAT 57.499 30.769 0.00 0.00 0.00 1.40
1736 1848 8.952278 TGTTTTGGCGTATATCAGTCTTTAATT 58.048 29.630 0.00 0.00 0.00 1.40
1737 1849 9.783256 GTTTTGGCGTATATCAGTCTTTAATTT 57.217 29.630 0.00 0.00 0.00 1.82
1741 1853 8.757789 TGGCGTATATCAGTCTTTAATTTTACG 58.242 33.333 0.00 0.00 0.00 3.18
1742 1854 7.739043 GGCGTATATCAGTCTTTAATTTTACGC 59.261 37.037 0.00 0.00 45.91 4.42
1743 1855 7.470358 GCGTATATCAGTCTTTAATTTTACGCG 59.530 37.037 3.53 3.53 40.02 6.01
1744 1856 7.943065 CGTATATCAGTCTTTAATTTTACGCGG 59.057 37.037 12.47 0.00 0.00 6.46
1745 1857 7.781548 ATATCAGTCTTTAATTTTACGCGGT 57.218 32.000 12.47 0.00 0.00 5.68
1746 1858 5.927954 TCAGTCTTTAATTTTACGCGGTT 57.072 34.783 12.47 0.00 0.00 4.44
1747 1859 5.919196 TCAGTCTTTAATTTTACGCGGTTC 58.081 37.500 12.47 0.00 0.00 3.62
1748 1860 5.084055 CAGTCTTTAATTTTACGCGGTTCC 58.916 41.667 12.47 0.00 0.00 3.62
1749 1861 4.756135 AGTCTTTAATTTTACGCGGTTCCA 59.244 37.500 12.47 0.00 0.00 3.53
1750 1862 5.413523 AGTCTTTAATTTTACGCGGTTCCAT 59.586 36.000 12.47 0.00 0.00 3.41
1751 1863 6.594937 AGTCTTTAATTTTACGCGGTTCCATA 59.405 34.615 12.47 0.00 0.00 2.74
1752 1864 6.684131 GTCTTTAATTTTACGCGGTTCCATAC 59.316 38.462 12.47 0.00 0.00 2.39
1753 1865 6.594937 TCTTTAATTTTACGCGGTTCCATACT 59.405 34.615 12.47 0.00 0.00 2.12
1754 1866 4.870221 AATTTTACGCGGTTCCATACTC 57.130 40.909 12.47 0.00 0.00 2.59
1755 1867 3.316071 TTTTACGCGGTTCCATACTCA 57.684 42.857 12.47 0.00 0.00 3.41
1756 1868 2.282701 TTACGCGGTTCCATACTCAC 57.717 50.000 12.47 0.00 0.00 3.51
1757 1869 1.466856 TACGCGGTTCCATACTCACT 58.533 50.000 12.47 0.00 0.00 3.41
1758 1870 1.466856 ACGCGGTTCCATACTCACTA 58.533 50.000 12.47 0.00 0.00 2.74
1759 1871 1.404391 ACGCGGTTCCATACTCACTAG 59.596 52.381 12.47 0.00 0.00 2.57
1760 1872 1.404391 CGCGGTTCCATACTCACTAGT 59.596 52.381 0.00 0.00 39.91 2.57
1761 1873 2.794981 CGCGGTTCCATACTCACTAGTG 60.795 54.545 17.17 17.17 36.36 2.74
1762 1874 2.165845 GCGGTTCCATACTCACTAGTGT 59.834 50.000 21.99 6.99 36.36 3.55
1763 1875 3.770666 CGGTTCCATACTCACTAGTGTG 58.229 50.000 21.99 21.22 42.71 3.82
1764 1876 3.522553 GGTTCCATACTCACTAGTGTGC 58.477 50.000 21.99 5.51 41.97 4.57
1765 1877 3.179830 GTTCCATACTCACTAGTGTGCG 58.820 50.000 21.99 13.84 41.97 5.34
1766 1878 1.749063 TCCATACTCACTAGTGTGCGG 59.251 52.381 21.99 18.83 41.97 5.69
1767 1879 1.560923 CATACTCACTAGTGTGCGGC 58.439 55.000 21.99 0.00 43.49 6.53
1768 1880 1.135112 CATACTCACTAGTGTGCGGCA 60.135 52.381 21.99 0.00 43.49 5.69
1769 1881 0.526211 TACTCACTAGTGTGCGGCAG 59.474 55.000 21.99 13.22 43.49 4.85
1770 1882 2.048222 TCACTAGTGTGCGGCAGC 60.048 61.111 21.99 0.31 43.49 5.25
1771 1883 3.121030 CACTAGTGTGCGGCAGCC 61.121 66.667 15.06 0.00 44.33 4.85
1772 1884 3.625897 ACTAGTGTGCGGCAGCCA 61.626 61.111 13.30 0.76 44.33 4.75
1773 1885 2.816958 CTAGTGTGCGGCAGCCAG 60.817 66.667 13.30 5.53 44.33 4.85
1774 1886 4.393155 TAGTGTGCGGCAGCCAGG 62.393 66.667 13.30 0.00 44.33 4.45
1783 1895 3.492353 GCAGCCAGGGCCTATCCA 61.492 66.667 5.28 0.00 43.17 3.41
1784 1896 2.512896 CAGCCAGGGCCTATCCAC 59.487 66.667 5.28 0.00 43.17 4.02
1785 1897 2.774351 AGCCAGGGCCTATCCACC 60.774 66.667 5.28 0.00 43.17 4.61
1786 1898 2.774351 GCCAGGGCCTATCCACCT 60.774 66.667 5.28 0.00 36.21 4.00
1787 1899 2.823758 GCCAGGGCCTATCCACCTC 61.824 68.421 5.28 0.00 36.21 3.85
1788 1900 1.384502 CCAGGGCCTATCCACCTCA 60.385 63.158 5.28 0.00 36.21 3.86
1789 1901 0.988145 CCAGGGCCTATCCACCTCAA 60.988 60.000 5.28 0.00 36.21 3.02
1790 1902 0.181350 CAGGGCCTATCCACCTCAAC 59.819 60.000 5.28 0.00 36.21 3.18
1791 1903 0.044855 AGGGCCTATCCACCTCAACT 59.955 55.000 2.82 0.00 36.21 3.16
1792 1904 1.294068 AGGGCCTATCCACCTCAACTA 59.706 52.381 2.82 0.00 36.21 2.24
1793 1905 2.124411 GGGCCTATCCACCTCAACTAA 58.876 52.381 0.84 0.00 36.21 2.24
1794 1906 2.104963 GGGCCTATCCACCTCAACTAAG 59.895 54.545 0.84 0.00 36.21 2.18
1795 1907 2.104963 GGCCTATCCACCTCAACTAAGG 59.895 54.545 0.00 0.00 42.55 2.69
1796 1908 2.104963 GCCTATCCACCTCAACTAAGGG 59.895 54.545 0.00 0.00 41.04 3.95
1797 1909 2.104963 CCTATCCACCTCAACTAAGGGC 59.895 54.545 0.00 0.00 41.04 5.19
1798 1910 1.668826 ATCCACCTCAACTAAGGGCA 58.331 50.000 0.00 0.00 41.04 5.36
1799 1911 1.668826 TCCACCTCAACTAAGGGCAT 58.331 50.000 0.00 0.00 41.04 4.40
1800 1912 1.559682 TCCACCTCAACTAAGGGCATC 59.440 52.381 0.00 0.00 41.04 3.91
1801 1913 1.561542 CCACCTCAACTAAGGGCATCT 59.438 52.381 0.00 0.00 41.04 2.90
1802 1914 2.420687 CCACCTCAACTAAGGGCATCTC 60.421 54.545 0.00 0.00 41.04 2.75
1803 1915 1.840635 ACCTCAACTAAGGGCATCTCC 59.159 52.381 0.00 0.00 41.04 3.71
1804 1916 1.839994 CCTCAACTAAGGGCATCTCCA 59.160 52.381 0.00 0.00 36.21 3.86
1805 1917 2.158842 CCTCAACTAAGGGCATCTCCAG 60.159 54.545 0.00 0.00 36.21 3.86
1806 1918 1.210478 TCAACTAAGGGCATCTCCAGC 59.790 52.381 0.00 0.00 36.21 4.85
1812 1924 2.191641 GGCATCTCCAGCCCAGTC 59.808 66.667 0.00 0.00 46.50 3.51
1813 1925 2.202987 GCATCTCCAGCCCAGTCG 60.203 66.667 0.00 0.00 0.00 4.18
1814 1926 2.202987 CATCTCCAGCCCAGTCGC 60.203 66.667 0.00 0.00 0.00 5.19
1815 1927 3.842923 ATCTCCAGCCCAGTCGCG 61.843 66.667 0.00 0.00 0.00 5.87
1824 1936 4.069232 CCAGTCGCGCCCTCAGAA 62.069 66.667 0.00 0.00 0.00 3.02
1825 1937 2.811317 CAGTCGCGCCCTCAGAAC 60.811 66.667 0.00 0.00 0.00 3.01
1826 1938 4.421479 AGTCGCGCCCTCAGAACG 62.421 66.667 0.00 0.00 0.00 3.95
1831 1943 4.735132 CGCCCTCAGAACGCCGAA 62.735 66.667 0.00 0.00 0.00 4.30
1832 1944 2.358247 GCCCTCAGAACGCCGAAA 60.358 61.111 0.00 0.00 0.00 3.46
1833 1945 1.964373 GCCCTCAGAACGCCGAAAA 60.964 57.895 0.00 0.00 0.00 2.29
1834 1946 1.305930 GCCCTCAGAACGCCGAAAAT 61.306 55.000 0.00 0.00 0.00 1.82
1835 1947 0.727398 CCCTCAGAACGCCGAAAATC 59.273 55.000 0.00 0.00 0.00 2.17
1836 1948 0.370273 CCTCAGAACGCCGAAAATCG 59.630 55.000 0.00 0.00 40.07 3.34
1837 1949 0.247301 CTCAGAACGCCGAAAATCGC 60.247 55.000 0.00 0.00 38.82 4.58
1838 1950 1.226018 CAGAACGCCGAAAATCGCC 60.226 57.895 0.00 0.00 38.82 5.54
1839 1951 2.276430 GAACGCCGAAAATCGCCG 60.276 61.111 1.44 1.44 46.50 6.46
1840 1952 3.711997 GAACGCCGAAAATCGCCGG 62.712 63.158 7.99 0.00 45.33 6.13
1842 1954 3.795342 CGCCGAAAATCGCCGGTT 61.795 61.111 1.90 0.00 46.84 4.44
1843 1955 2.099638 GCCGAAAATCGCCGGTTC 59.900 61.111 1.90 0.00 46.84 3.62
1844 1956 2.398036 CCGAAAATCGCCGGTTCG 59.602 61.111 15.14 15.14 42.85 3.95
1881 1993 4.717313 GGTCACAGGCCGAACCCC 62.717 72.222 0.00 0.00 40.58 4.95
1901 2013 4.785453 GCGCTGGGGAGGAGTTGG 62.785 72.222 0.00 0.00 0.00 3.77
1902 2014 4.101448 CGCTGGGGAGGAGTTGGG 62.101 72.222 0.00 0.00 0.00 4.12
1903 2015 3.732849 GCTGGGGAGGAGTTGGGG 61.733 72.222 0.00 0.00 0.00 4.96
1904 2016 3.017581 CTGGGGAGGAGTTGGGGG 61.018 72.222 0.00 0.00 0.00 5.40
1907 2019 3.412408 GGGAGGAGTTGGGGGCTC 61.412 72.222 0.00 0.00 0.00 4.70
1921 2033 4.157120 GCTCCGGCGCTAGGGAAA 62.157 66.667 19.31 3.12 0.00 3.13
1922 2034 2.582436 CTCCGGCGCTAGGGAAAA 59.418 61.111 19.31 2.81 0.00 2.29
1923 2035 1.521681 CTCCGGCGCTAGGGAAAAG 60.522 63.158 19.31 8.14 0.00 2.27
1924 2036 3.202706 CCGGCGCTAGGGAAAAGC 61.203 66.667 11.61 0.00 36.60 3.51
1925 2037 2.435938 CGGCGCTAGGGAAAAGCA 60.436 61.111 11.61 0.00 40.08 3.91
1926 2038 2.750888 CGGCGCTAGGGAAAAGCAC 61.751 63.158 11.61 0.00 40.08 4.40
1927 2039 2.750888 GGCGCTAGGGAAAAGCACG 61.751 63.158 11.61 0.00 40.08 5.34
1928 2040 2.785258 CGCTAGGGAAAAGCACGC 59.215 61.111 0.00 0.00 40.08 5.34
1929 2041 2.750888 CGCTAGGGAAAAGCACGCC 61.751 63.158 0.00 0.00 40.08 5.68
1930 2042 1.377333 GCTAGGGAAAAGCACGCCT 60.377 57.895 0.00 0.00 39.83 5.52
1931 2043 1.648467 GCTAGGGAAAAGCACGCCTG 61.648 60.000 0.00 0.00 39.83 4.85
1932 2044 1.002624 TAGGGAAAAGCACGCCTGG 60.003 57.895 0.00 0.00 0.00 4.45
1933 2045 4.056125 GGGAAAAGCACGCCTGGC 62.056 66.667 9.11 9.11 0.00 4.85
1934 2046 4.056125 GGAAAAGCACGCCTGGCC 62.056 66.667 14.12 0.00 0.00 5.36
1935 2047 4.056125 GAAAAGCACGCCTGGCCC 62.056 66.667 14.12 1.57 0.00 5.80
1936 2048 4.912395 AAAAGCACGCCTGGCCCA 62.912 61.111 14.12 0.00 0.00 5.36
1945 2057 4.704833 CCTGGCCCACACCGACAG 62.705 72.222 0.00 0.00 0.00 3.51
1946 2058 4.704833 CTGGCCCACACCGACAGG 62.705 72.222 0.00 0.00 45.13 4.00
1950 2062 3.246112 CCCACACCGACAGGGGAA 61.246 66.667 0.00 0.00 46.39 3.97
1951 2063 2.824880 CCCACACCGACAGGGGAAA 61.825 63.158 0.00 0.00 46.39 3.13
1952 2064 1.149627 CCACACCGACAGGGGAAAA 59.850 57.895 0.00 0.00 46.39 2.29
1953 2065 0.889186 CCACACCGACAGGGGAAAAG 60.889 60.000 0.00 0.00 46.39 2.27
1954 2066 0.179029 CACACCGACAGGGGAAAAGT 60.179 55.000 0.00 0.00 46.39 2.66
1955 2067 0.108019 ACACCGACAGGGGAAAAGTC 59.892 55.000 0.00 0.00 46.39 3.01
1956 2068 0.107831 CACCGACAGGGGAAAAGTCA 59.892 55.000 0.00 0.00 46.39 3.41
1957 2069 0.841289 ACCGACAGGGGAAAAGTCAA 59.159 50.000 0.00 0.00 43.47 3.18
1958 2070 1.202770 ACCGACAGGGGAAAAGTCAAG 60.203 52.381 0.00 0.00 43.47 3.02
1959 2071 1.523758 CGACAGGGGAAAAGTCAAGG 58.476 55.000 0.00 0.00 32.68 3.61
1960 2072 1.202770 CGACAGGGGAAAAGTCAAGGT 60.203 52.381 0.00 0.00 32.68 3.50
1961 2073 2.748465 CGACAGGGGAAAAGTCAAGGTT 60.748 50.000 0.00 0.00 32.68 3.50
1962 2074 3.296854 GACAGGGGAAAAGTCAAGGTTT 58.703 45.455 0.00 0.00 32.68 3.27
1963 2075 3.704566 GACAGGGGAAAAGTCAAGGTTTT 59.295 43.478 0.00 0.00 32.68 2.43
1964 2076 3.704566 ACAGGGGAAAAGTCAAGGTTTTC 59.295 43.478 0.00 0.00 41.33 2.29
1965 2077 3.960755 CAGGGGAAAAGTCAAGGTTTTCT 59.039 43.478 7.92 0.00 41.63 2.52
1966 2078 4.405680 CAGGGGAAAAGTCAAGGTTTTCTT 59.594 41.667 7.92 0.00 41.63 2.52
1967 2079 4.649674 AGGGGAAAAGTCAAGGTTTTCTTC 59.350 41.667 7.92 2.57 41.63 2.87
1968 2080 4.202223 GGGGAAAAGTCAAGGTTTTCTTCC 60.202 45.833 7.92 6.79 41.63 3.46
1969 2081 4.202223 GGGAAAAGTCAAGGTTTTCTTCCC 60.202 45.833 7.92 1.01 41.63 3.97
1970 2082 4.202223 GGAAAAGTCAAGGTTTTCTTCCCC 60.202 45.833 7.92 0.00 41.63 4.81
1971 2083 2.677542 AGTCAAGGTTTTCTTCCCCC 57.322 50.000 0.00 0.00 32.41 5.40
1972 2084 1.202891 AGTCAAGGTTTTCTTCCCCCG 60.203 52.381 0.00 0.00 32.41 5.73
1973 2085 1.142060 TCAAGGTTTTCTTCCCCCGA 58.858 50.000 0.00 0.00 32.41 5.14
1974 2086 1.202842 TCAAGGTTTTCTTCCCCCGAC 60.203 52.381 0.00 0.00 32.41 4.79
1975 2087 1.146452 AAGGTTTTCTTCCCCCGACT 58.854 50.000 0.00 0.00 0.00 4.18
1976 2088 0.691332 AGGTTTTCTTCCCCCGACTC 59.309 55.000 0.00 0.00 0.00 3.36
1977 2089 0.672711 GGTTTTCTTCCCCCGACTCG 60.673 60.000 0.00 0.00 0.00 4.18
1978 2090 1.004200 TTTTCTTCCCCCGACTCGC 60.004 57.895 0.00 0.00 0.00 5.03
1979 2091 2.459202 TTTTCTTCCCCCGACTCGCC 62.459 60.000 0.00 0.00 0.00 5.54
1980 2092 3.899545 TTCTTCCCCCGACTCGCCT 62.900 63.158 0.00 0.00 0.00 5.52
1981 2093 3.839432 CTTCCCCCGACTCGCCTC 61.839 72.222 0.00 0.00 0.00 4.70
2010 2122 4.162690 GCCCTCGGCCACCACTAG 62.163 72.222 2.24 0.00 44.06 2.57
2011 2123 4.162690 CCCTCGGCCACCACTAGC 62.163 72.222 2.24 0.00 0.00 3.42
2012 2124 3.077556 CCTCGGCCACCACTAGCT 61.078 66.667 2.24 0.00 0.00 3.32
2013 2125 1.756950 CCTCGGCCACCACTAGCTA 60.757 63.158 2.24 0.00 0.00 3.32
2014 2126 1.115930 CCTCGGCCACCACTAGCTAT 61.116 60.000 2.24 0.00 0.00 2.97
2015 2127 1.617322 CTCGGCCACCACTAGCTATA 58.383 55.000 2.24 0.00 0.00 1.31
2016 2128 2.171840 CTCGGCCACCACTAGCTATAT 58.828 52.381 2.24 0.00 0.00 0.86
2017 2129 2.164624 CTCGGCCACCACTAGCTATATC 59.835 54.545 2.24 0.00 0.00 1.63
2018 2130 1.204941 CGGCCACCACTAGCTATATCC 59.795 57.143 2.24 0.00 0.00 2.59
2019 2131 1.555533 GGCCACCACTAGCTATATCCC 59.444 57.143 0.00 0.00 0.00 3.85
2020 2132 1.204941 GCCACCACTAGCTATATCCCG 59.795 57.143 0.00 0.00 0.00 5.14
2021 2133 1.825474 CCACCACTAGCTATATCCCGG 59.175 57.143 0.00 0.00 0.00 5.73
2022 2134 1.204941 CACCACTAGCTATATCCCGGC 59.795 57.143 0.00 0.00 0.00 6.13
2023 2135 0.456221 CCACTAGCTATATCCCGGCG 59.544 60.000 0.00 0.00 0.00 6.46
2024 2136 1.460504 CACTAGCTATATCCCGGCGA 58.539 55.000 9.30 0.00 0.00 5.54
2025 2137 2.025155 CACTAGCTATATCCCGGCGAT 58.975 52.381 9.30 2.96 34.73 4.58
2026 2138 2.025155 ACTAGCTATATCCCGGCGATG 58.975 52.381 9.30 0.00 31.92 3.84
2027 2139 1.338337 CTAGCTATATCCCGGCGATGG 59.662 57.143 9.30 1.02 31.92 3.51
2028 2140 1.521681 GCTATATCCCGGCGATGGC 60.522 63.158 9.30 3.27 38.90 4.40
2047 2159 3.979739 GCCGCCCTACTCCGCTAG 61.980 72.222 0.00 0.00 0.00 3.42
2048 2160 2.203308 CCGCCCTACTCCGCTAGA 60.203 66.667 0.00 0.00 0.00 2.43
2049 2161 1.604023 CCGCCCTACTCCGCTAGAT 60.604 63.158 0.00 0.00 0.00 1.98
2050 2162 0.322277 CCGCCCTACTCCGCTAGATA 60.322 60.000 0.00 0.00 0.00 1.98
2051 2163 1.088306 CGCCCTACTCCGCTAGATAG 58.912 60.000 0.00 0.00 0.00 2.08
2052 2164 0.812549 GCCCTACTCCGCTAGATAGC 59.187 60.000 1.59 1.59 45.62 2.97
2053 2165 1.465794 CCCTACTCCGCTAGATAGCC 58.534 60.000 6.28 0.00 46.34 3.93
2054 2166 1.271982 CCCTACTCCGCTAGATAGCCA 60.272 57.143 6.28 0.00 46.34 4.75
2055 2167 2.621929 CCCTACTCCGCTAGATAGCCAT 60.622 54.545 6.28 0.00 46.34 4.40
2056 2168 3.093057 CCTACTCCGCTAGATAGCCATT 58.907 50.000 6.28 0.00 46.34 3.16
2057 2169 3.129638 CCTACTCCGCTAGATAGCCATTC 59.870 52.174 6.28 0.00 46.34 2.67
2058 2170 1.896465 ACTCCGCTAGATAGCCATTCC 59.104 52.381 6.28 0.00 46.34 3.01
2059 2171 1.205893 CTCCGCTAGATAGCCATTCCC 59.794 57.143 6.28 0.00 46.34 3.97
2060 2172 0.250513 CCGCTAGATAGCCATTCCCC 59.749 60.000 6.28 0.00 46.34 4.81
2061 2173 0.108615 CGCTAGATAGCCATTCCCCG 60.109 60.000 6.28 0.00 46.34 5.73
2062 2174 0.391793 GCTAGATAGCCATTCCCCGC 60.392 60.000 0.09 0.00 43.39 6.13
2063 2175 0.250513 CTAGATAGCCATTCCCCGCC 59.749 60.000 0.00 0.00 0.00 6.13
2064 2176 1.541310 TAGATAGCCATTCCCCGCCG 61.541 60.000 0.00 0.00 0.00 6.46
2065 2177 2.847234 ATAGCCATTCCCCGCCGA 60.847 61.111 0.00 0.00 0.00 5.54
2066 2178 2.391724 GATAGCCATTCCCCGCCGAA 62.392 60.000 0.00 0.00 0.00 4.30
2067 2179 1.990160 ATAGCCATTCCCCGCCGAAA 61.990 55.000 0.00 0.00 0.00 3.46
2068 2180 2.199613 TAGCCATTCCCCGCCGAAAA 62.200 55.000 0.00 0.00 0.00 2.29
2069 2181 2.641277 GCCATTCCCCGCCGAAAAA 61.641 57.895 0.00 0.00 0.00 1.94
2070 2182 1.955495 GCCATTCCCCGCCGAAAAAT 61.955 55.000 0.00 0.00 0.00 1.82
2071 2183 1.394618 CCATTCCCCGCCGAAAAATA 58.605 50.000 0.00 0.00 0.00 1.40
2072 2184 1.336755 CCATTCCCCGCCGAAAAATAG 59.663 52.381 0.00 0.00 0.00 1.73
2073 2185 1.029681 ATTCCCCGCCGAAAAATAGC 58.970 50.000 0.00 0.00 0.00 2.97
2074 2186 0.322636 TTCCCCGCCGAAAAATAGCA 60.323 50.000 0.00 0.00 0.00 3.49
2075 2187 0.746563 TCCCCGCCGAAAAATAGCAG 60.747 55.000 0.00 0.00 0.00 4.24
2076 2188 1.064134 CCCGCCGAAAAATAGCAGC 59.936 57.895 0.00 0.00 0.00 5.25
2077 2189 1.297598 CCGCCGAAAAATAGCAGCG 60.298 57.895 0.00 0.00 42.99 5.18
2078 2190 1.934476 CGCCGAAAAATAGCAGCGC 60.934 57.895 0.00 0.00 36.89 5.92
2079 2191 1.429423 GCCGAAAAATAGCAGCGCT 59.571 52.632 2.64 2.64 43.41 5.92
2080 2192 0.179163 GCCGAAAAATAGCAGCGCTT 60.179 50.000 7.50 0.00 40.44 4.68
2081 2193 1.815132 CCGAAAAATAGCAGCGCTTC 58.185 50.000 7.50 1.45 40.44 3.86
2082 2194 1.446731 CGAAAAATAGCAGCGCTTCG 58.553 50.000 7.50 8.56 40.44 3.79
2116 2228 3.289834 CACAGCAGCTGGGCGTTT 61.290 61.111 26.38 0.79 39.27 3.60
2117 2229 2.980233 ACAGCAGCTGGGCGTTTC 60.980 61.111 26.38 0.00 39.27 2.78
2118 2230 3.741476 CAGCAGCTGGGCGTTTCC 61.741 66.667 17.12 0.00 39.27 3.13
2130 2242 4.394078 GTTTCCGGCCGCCGTTTC 62.394 66.667 29.21 13.31 46.80 2.78
2151 2263 4.745751 CCGTGGAGGCGCGGTTTA 62.746 66.667 8.83 0.00 42.73 2.01
2152 2264 2.739287 CGTGGAGGCGCGGTTTAA 60.739 61.111 8.83 0.00 0.00 1.52
2153 2265 2.865308 GTGGAGGCGCGGTTTAAC 59.135 61.111 8.83 0.00 0.00 2.01
2154 2266 2.739287 TGGAGGCGCGGTTTAACG 60.739 61.111 8.83 0.00 0.00 3.18
2155 2267 3.493440 GGAGGCGCGGTTTAACGG 61.493 66.667 8.83 0.00 0.00 4.44
2161 2273 2.434011 GCGGTTTAACGGCGGGTA 60.434 61.111 13.24 0.00 34.81 3.69
2162 2274 2.739704 GCGGTTTAACGGCGGGTAC 61.740 63.158 13.24 3.40 34.81 3.34
2163 2275 1.373999 CGGTTTAACGGCGGGTACA 60.374 57.895 13.24 0.00 0.00 2.90
2164 2276 1.625759 CGGTTTAACGGCGGGTACAC 61.626 60.000 13.24 6.24 0.00 2.90
2165 2277 1.625759 GGTTTAACGGCGGGTACACG 61.626 60.000 14.60 14.60 0.00 4.49
2192 2304 3.645975 CGCAAGGTGTTCGGCGTT 61.646 61.111 6.85 0.00 44.11 4.84
2193 2305 2.719354 GCAAGGTGTTCGGCGTTT 59.281 55.556 6.85 0.00 0.00 3.60
2194 2306 1.065109 GCAAGGTGTTCGGCGTTTT 59.935 52.632 6.85 0.00 0.00 2.43
2195 2307 1.206115 GCAAGGTGTTCGGCGTTTTG 61.206 55.000 6.85 5.26 0.00 2.44
2196 2308 1.065109 AAGGTGTTCGGCGTTTTGC 59.935 52.632 6.85 0.00 45.38 3.68
2205 2317 2.556287 GCGTTTTGCCTGTCTCGG 59.444 61.111 0.00 0.00 37.76 4.63
2212 2324 3.838271 GCCTGTCTCGGCGATGGA 61.838 66.667 11.27 1.49 40.79 3.41
2213 2325 2.105128 CCTGTCTCGGCGATGGAC 59.895 66.667 18.93 18.93 0.00 4.02
2214 2326 2.418910 CCTGTCTCGGCGATGGACT 61.419 63.158 23.88 0.00 0.00 3.85
2215 2327 1.064946 CTGTCTCGGCGATGGACTC 59.935 63.158 23.88 5.59 0.00 3.36
2232 2344 0.673437 CTCGGATGAGGAGGAAGAGC 59.327 60.000 0.00 0.00 38.65 4.09
2233 2345 0.260230 TCGGATGAGGAGGAAGAGCT 59.740 55.000 0.00 0.00 0.00 4.09
2234 2346 0.673437 CGGATGAGGAGGAAGAGCTC 59.327 60.000 5.27 5.27 0.00 4.09
2235 2347 0.673437 GGATGAGGAGGAAGAGCTCG 59.327 60.000 8.37 0.00 0.00 5.03
2236 2348 0.031994 GATGAGGAGGAAGAGCTCGC 59.968 60.000 8.37 4.49 0.00 5.03
2237 2349 1.398958 ATGAGGAGGAAGAGCTCGCC 61.399 60.000 17.80 17.80 0.00 5.54
2238 2350 3.132481 GAGGAGGAAGAGCTCGCCG 62.132 68.421 18.91 0.00 0.00 6.46
2239 2351 4.882396 GGAGGAAGAGCTCGCCGC 62.882 72.222 19.11 19.11 39.57 6.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.878070 CAGGAAAATCGCAGCAGCA 59.122 52.632 0.82 0.00 42.27 4.41
1 2 1.515736 GCAGGAAAATCGCAGCAGC 60.516 57.895 0.00 0.00 37.42 5.25
2 3 0.179171 CAGCAGGAAAATCGCAGCAG 60.179 55.000 0.00 0.00 0.00 4.24
3 4 1.878070 CAGCAGGAAAATCGCAGCA 59.122 52.632 0.00 0.00 0.00 4.41
33 34 7.330946 TGTGTATTAGCAACTCTTGTATGTGTC 59.669 37.037 0.00 0.00 0.00 3.67
55 56 3.941483 GCAGCAGACCTATAAACATGTGT 59.059 43.478 0.00 0.00 0.00 3.72
58 59 4.577693 ACATGCAGCAGACCTATAAACATG 59.422 41.667 0.00 0.00 38.59 3.21
62 63 4.486125 TCACATGCAGCAGACCTATAAA 57.514 40.909 0.00 0.00 0.00 1.40
71 72 3.190744 AGAACAAGATTCACATGCAGCAG 59.809 43.478 0.00 0.00 0.00 4.24
106 107 2.242196 TGGCCCTCCCTTTCTTAATCAG 59.758 50.000 0.00 0.00 0.00 2.90
108 109 2.656002 GTGGCCCTCCCTTTCTTAATC 58.344 52.381 0.00 0.00 0.00 1.75
110 111 0.326927 CGTGGCCCTCCCTTTCTTAA 59.673 55.000 0.00 0.00 0.00 1.85
111 112 1.559065 CCGTGGCCCTCCCTTTCTTA 61.559 60.000 0.00 0.00 0.00 2.10
113 114 3.330720 CCGTGGCCCTCCCTTTCT 61.331 66.667 0.00 0.00 0.00 2.52
139 140 4.828072 TCAGCGCCTCTCTATCTATCTA 57.172 45.455 2.29 0.00 0.00 1.98
174 175 7.025963 CAGTTGCAATATCCAGAGAAGAAAAC 58.974 38.462 0.59 0.00 0.00 2.43
198 200 2.158914 TGAAGCAGAGAGACAAACAGCA 60.159 45.455 0.00 0.00 0.00 4.41
208 210 3.629855 TCTCTATTCCGTGAAGCAGAGAG 59.370 47.826 17.36 13.27 38.05 3.20
210 212 3.629855 TCTCTCTATTCCGTGAAGCAGAG 59.370 47.826 14.90 14.90 36.67 3.35
220 222 5.762711 TCTCTCAATGTCTCTCTCTATTCCG 59.237 44.000 0.00 0.00 0.00 4.30
222 224 7.716998 AGTCTCTCTCAATGTCTCTCTCTATTC 59.283 40.741 0.00 0.00 0.00 1.75
225 227 6.348498 CAGTCTCTCTCAATGTCTCTCTCTA 58.652 44.000 0.00 0.00 0.00 2.43
226 228 5.188434 CAGTCTCTCTCAATGTCTCTCTCT 58.812 45.833 0.00 0.00 0.00 3.10
227 229 4.201950 GCAGTCTCTCTCAATGTCTCTCTC 60.202 50.000 0.00 0.00 0.00 3.20
228 230 3.696051 GCAGTCTCTCTCAATGTCTCTCT 59.304 47.826 0.00 0.00 0.00 3.10
229 231 3.696051 AGCAGTCTCTCTCAATGTCTCTC 59.304 47.826 0.00 0.00 0.00 3.20
230 232 3.696051 GAGCAGTCTCTCTCAATGTCTCT 59.304 47.826 0.00 0.00 36.42 3.10
231 233 3.443329 TGAGCAGTCTCTCTCAATGTCTC 59.557 47.826 0.09 0.00 40.03 3.36
232 234 3.429492 TGAGCAGTCTCTCTCAATGTCT 58.571 45.455 0.09 0.00 40.03 3.41
233 235 3.865011 TGAGCAGTCTCTCTCAATGTC 57.135 47.619 0.09 0.00 40.03 3.06
234 236 7.594351 TTATATGAGCAGTCTCTCTCAATGT 57.406 36.000 5.66 0.06 41.96 2.71
235 237 8.358895 TCTTTATATGAGCAGTCTCTCTCAATG 58.641 37.037 5.66 0.00 41.96 2.82
236 238 8.476064 TCTTTATATGAGCAGTCTCTCTCAAT 57.524 34.615 5.66 4.58 41.96 2.57
264 266 6.403866 AGACATTTCTCGCAATATCTCTCT 57.596 37.500 0.00 0.00 0.00 3.10
265 267 8.646356 CAATAGACATTTCTCGCAATATCTCTC 58.354 37.037 0.00 0.00 32.75 3.20
266 268 8.147058 ACAATAGACATTTCTCGCAATATCTCT 58.853 33.333 0.00 0.00 32.75 3.10
267 269 8.304202 ACAATAGACATTTCTCGCAATATCTC 57.696 34.615 0.00 0.00 32.75 2.75
268 270 8.147058 AGACAATAGACATTTCTCGCAATATCT 58.853 33.333 0.00 0.00 32.75 1.98
271 295 9.764363 AATAGACAATAGACATTTCTCGCAATA 57.236 29.630 0.00 0.00 32.75 1.90
276 300 8.425577 AACCAATAGACAATAGACATTTCTCG 57.574 34.615 0.00 0.00 32.75 4.04
286 310 6.510157 CGCAGCTACAAACCAATAGACAATAG 60.510 42.308 0.00 0.00 0.00 1.73
397 424 6.677781 TTCTTCACTGTCGAAAGTCAAAAT 57.322 33.333 4.91 0.00 0.00 1.82
408 437 4.290155 CCCAATGTTTTTCTTCACTGTCG 58.710 43.478 0.00 0.00 0.00 4.35
436 465 1.858000 GCACGAGCATCTCAGACTACG 60.858 57.143 0.00 0.00 41.58 3.51
453 482 6.663944 ATTACGATACAAGAAAGAAGGCAC 57.336 37.500 0.00 0.00 0.00 5.01
454 483 7.361713 CCAAATTACGATACAAGAAAGAAGGCA 60.362 37.037 0.00 0.00 0.00 4.75
455 484 6.967199 CCAAATTACGATACAAGAAAGAAGGC 59.033 38.462 0.00 0.00 0.00 4.35
456 485 8.040716 ACCAAATTACGATACAAGAAAGAAGG 57.959 34.615 0.00 0.00 0.00 3.46
471 500 9.974750 AACAAACAAACAAATAACCAAATTACG 57.025 25.926 0.00 0.00 0.00 3.18
483 512 6.234723 ACGAAAAGCAACAAACAAACAAAT 57.765 29.167 0.00 0.00 0.00 2.32
495 528 2.119457 CTTGGAGCAACGAAAAGCAAC 58.881 47.619 0.00 0.00 0.00 4.17
497 530 1.333619 GACTTGGAGCAACGAAAAGCA 59.666 47.619 0.00 0.00 0.00 3.91
525 558 5.627499 ACGCAGTTAACAATCACATCATT 57.373 34.783 8.61 0.00 37.78 2.57
643 702 5.941788 ACCTCTTGACTGTCCAAGTTAATT 58.058 37.500 5.17 0.00 42.95 1.40
652 711 7.445707 AGAGAAAATAAAACCTCTTGACTGTCC 59.554 37.037 5.17 0.00 32.55 4.02
684 743 6.947733 AGCTCAGAGTCATAAGCAGAGTATAT 59.052 38.462 12.23 0.00 37.22 0.86
688 747 3.130869 CAGCTCAGAGTCATAAGCAGAGT 59.869 47.826 12.23 0.00 37.22 3.24
689 748 3.380954 TCAGCTCAGAGTCATAAGCAGAG 59.619 47.826 12.23 0.00 37.22 3.35
690 749 3.359950 TCAGCTCAGAGTCATAAGCAGA 58.640 45.455 12.23 7.87 37.22 4.26
691 750 3.797451 TCAGCTCAGAGTCATAAGCAG 57.203 47.619 12.23 6.02 37.22 4.24
692 751 3.678252 GCTTCAGCTCAGAGTCATAAGCA 60.678 47.826 17.17 0.00 38.33 3.91
693 752 2.865551 GCTTCAGCTCAGAGTCATAAGC 59.134 50.000 0.00 6.29 38.21 3.09
694 753 4.120792 TGCTTCAGCTCAGAGTCATAAG 57.879 45.455 0.00 0.21 42.66 1.73
695 754 4.750021 ATGCTTCAGCTCAGAGTCATAA 57.250 40.909 0.00 0.00 42.66 1.90
696 755 4.081254 ACAATGCTTCAGCTCAGAGTCATA 60.081 41.667 0.00 0.00 42.66 2.15
697 756 3.271729 CAATGCTTCAGCTCAGAGTCAT 58.728 45.455 0.00 0.00 42.66 3.06
698 757 2.038164 ACAATGCTTCAGCTCAGAGTCA 59.962 45.455 0.00 0.00 42.66 3.41
699 758 2.697654 ACAATGCTTCAGCTCAGAGTC 58.302 47.619 0.00 0.00 42.66 3.36
700 759 2.855209 ACAATGCTTCAGCTCAGAGT 57.145 45.000 0.00 0.00 42.66 3.24
701 760 3.617706 CAGTACAATGCTTCAGCTCAGAG 59.382 47.826 0.00 0.00 42.66 3.35
702 761 3.593096 CAGTACAATGCTTCAGCTCAGA 58.407 45.455 0.00 0.00 42.66 3.27
703 762 2.095532 GCAGTACAATGCTTCAGCTCAG 59.904 50.000 0.00 0.00 43.07 3.35
704 763 2.079158 GCAGTACAATGCTTCAGCTCA 58.921 47.619 0.00 0.00 43.07 4.26
705 764 2.821307 GCAGTACAATGCTTCAGCTC 57.179 50.000 0.00 0.00 43.07 4.09
713 772 4.260538 GCAGAGTCATAAGCAGTACAATGC 60.261 45.833 0.00 0.00 46.88 3.56
714 773 5.006455 CAGCAGAGTCATAAGCAGTACAATG 59.994 44.000 0.00 0.00 0.00 2.82
715 774 5.114780 CAGCAGAGTCATAAGCAGTACAAT 58.885 41.667 0.00 0.00 0.00 2.71
716 775 4.498241 CAGCAGAGTCATAAGCAGTACAA 58.502 43.478 0.00 0.00 0.00 2.41
717 776 3.677148 GCAGCAGAGTCATAAGCAGTACA 60.677 47.826 0.00 0.00 0.00 2.90
718 777 2.863137 GCAGCAGAGTCATAAGCAGTAC 59.137 50.000 0.00 0.00 0.00 2.73
719 778 2.159043 GGCAGCAGAGTCATAAGCAGTA 60.159 50.000 0.00 0.00 0.00 2.74
720 779 1.406614 GGCAGCAGAGTCATAAGCAGT 60.407 52.381 0.00 0.00 0.00 4.40
721 780 1.134461 AGGCAGCAGAGTCATAAGCAG 60.134 52.381 0.00 0.00 0.00 4.24
722 781 0.907486 AGGCAGCAGAGTCATAAGCA 59.093 50.000 0.00 0.00 0.00 3.91
723 782 2.035530 AAGGCAGCAGAGTCATAAGC 57.964 50.000 0.00 0.00 0.00 3.09
724 783 4.005650 TCAAAAGGCAGCAGAGTCATAAG 58.994 43.478 0.00 0.00 0.00 1.73
725 784 3.753272 GTCAAAAGGCAGCAGAGTCATAA 59.247 43.478 0.00 0.00 0.00 1.90
726 785 3.008375 AGTCAAAAGGCAGCAGAGTCATA 59.992 43.478 0.00 0.00 0.00 2.15
727 786 2.157738 GTCAAAAGGCAGCAGAGTCAT 58.842 47.619 0.00 0.00 0.00 3.06
728 787 1.141657 AGTCAAAAGGCAGCAGAGTCA 59.858 47.619 0.00 0.00 0.00 3.41
729 788 1.889545 AGTCAAAAGGCAGCAGAGTC 58.110 50.000 0.00 0.00 0.00 3.36
733 792 0.239347 CGGAAGTCAAAAGGCAGCAG 59.761 55.000 0.00 0.00 0.00 4.24
770 831 9.199982 ACAACGCTATGTTATACCATTATACAC 57.800 33.333 0.00 0.00 39.29 2.90
771 832 9.198837 CACAACGCTATGTTATACCATTATACA 57.801 33.333 0.00 0.00 39.29 2.29
786 855 1.201661 CGAACGACACACAACGCTATG 60.202 52.381 0.00 0.00 0.00 2.23
787 856 1.057636 CGAACGACACACAACGCTAT 58.942 50.000 0.00 0.00 0.00 2.97
790 859 1.084478 GACGAACGACACACAACGC 60.084 57.895 0.14 0.00 0.00 4.84
791 860 0.226235 CAGACGAACGACACACAACG 59.774 55.000 0.14 0.00 0.00 4.10
803 872 6.387041 TGTCTAGAAAGAAAGTCAGACGAA 57.613 37.500 0.00 0.00 36.13 3.85
892 991 6.917217 ACATAAAGAGAGTTATGAAGCAGC 57.083 37.500 10.97 0.00 41.92 5.25
893 992 9.766277 GAAAACATAAAGAGAGTTATGAAGCAG 57.234 33.333 10.97 0.00 41.92 4.24
894 993 8.443160 CGAAAACATAAAGAGAGTTATGAAGCA 58.557 33.333 10.97 0.00 41.92 3.91
895 994 8.443937 ACGAAAACATAAAGAGAGTTATGAAGC 58.556 33.333 10.97 0.00 41.92 3.86
896 995 9.959775 GACGAAAACATAAAGAGAGTTATGAAG 57.040 33.333 10.97 2.13 41.92 3.02
897 996 9.483916 TGACGAAAACATAAAGAGAGTTATGAA 57.516 29.630 10.97 0.00 41.92 2.57
955 1054 7.582435 TGAAAGTACGAGTTTTGATCAGATC 57.418 36.000 3.11 3.11 0.00 2.75
957 1056 6.128553 GCATGAAAGTACGAGTTTTGATCAGA 60.129 38.462 0.00 0.00 0.00 3.27
958 1057 6.017933 GCATGAAAGTACGAGTTTTGATCAG 58.982 40.000 0.00 0.00 0.00 2.90
959 1058 5.468409 TGCATGAAAGTACGAGTTTTGATCA 59.532 36.000 0.00 0.00 0.00 2.92
960 1059 5.927030 TGCATGAAAGTACGAGTTTTGATC 58.073 37.500 0.00 0.00 0.00 2.92
961 1060 5.700832 TCTGCATGAAAGTACGAGTTTTGAT 59.299 36.000 0.00 0.00 0.00 2.57
962 1061 5.053811 TCTGCATGAAAGTACGAGTTTTGA 58.946 37.500 0.00 0.00 0.00 2.69
963 1062 5.342806 TCTGCATGAAAGTACGAGTTTTG 57.657 39.130 0.00 0.00 0.00 2.44
964 1063 7.097192 TCTATCTGCATGAAAGTACGAGTTTT 58.903 34.615 0.00 0.00 0.00 2.43
965 1064 6.631016 TCTATCTGCATGAAAGTACGAGTTT 58.369 36.000 0.00 0.00 0.00 2.66
977 1076 7.876582 CCATCTTGTTCTTATCTATCTGCATGA 59.123 37.037 0.00 0.00 0.00 3.07
1098 1197 2.435938 ATTGTACTGGCGCCACCG 60.436 61.111 29.03 20.47 43.94 4.94
1197 1296 1.071299 ATGGAGCACAGCAACGACA 59.929 52.632 0.00 0.00 0.00 4.35
1221 1320 0.535335 CCTAACGGTAGAGCTTGCCA 59.465 55.000 9.67 0.00 0.00 4.92
1230 1329 4.330944 TGCATATGGAACCTAACGGTAG 57.669 45.455 0.00 0.00 44.73 3.18
1301 1400 0.178767 TCAGGATCCGACAGCCATTG 59.821 55.000 5.98 0.00 0.00 2.82
1306 1405 0.532573 TGTCTTCAGGATCCGACAGC 59.467 55.000 14.17 2.98 33.01 4.40
1442 1552 0.744771 GCACGGACCCAGGAAGATTC 60.745 60.000 0.00 0.00 0.00 2.52
1468 1578 5.008619 TGGCTTGTATGCAACATATTTGG 57.991 39.130 0.00 0.00 38.10 3.28
1505 1617 5.721480 TGATTCAGACTCAGGAACCAATCTA 59.279 40.000 0.00 0.00 0.00 1.98
1507 1619 4.836825 TGATTCAGACTCAGGAACCAATC 58.163 43.478 0.00 0.00 0.00 2.67
1511 1623 5.006386 ACATTTGATTCAGACTCAGGAACC 58.994 41.667 0.00 0.00 0.00 3.62
1527 1639 4.902443 TTTACGCAACCAGAACATTTGA 57.098 36.364 0.00 0.00 0.00 2.69
1528 1640 5.040635 AGTTTTACGCAACCAGAACATTTG 58.959 37.500 0.00 0.00 0.00 2.32
1541 1653 3.413327 TGGGAAGCATAAGTTTTACGCA 58.587 40.909 0.00 0.00 0.00 5.24
1544 1656 7.970614 CAGAGATTTGGGAAGCATAAGTTTTAC 59.029 37.037 0.00 0.00 0.00 2.01
1550 1662 5.884792 ACTTCAGAGATTTGGGAAGCATAAG 59.115 40.000 0.00 0.00 40.21 1.73
1559 1671 5.706916 CAAATCACACTTCAGAGATTTGGG 58.293 41.667 15.32 0.00 46.70 4.12
1562 1674 7.441157 TCGTTACAAATCACACTTCAGAGATTT 59.559 33.333 0.00 0.00 40.29 2.17
1563 1675 6.929049 TCGTTACAAATCACACTTCAGAGATT 59.071 34.615 0.00 0.00 32.45 2.40
1564 1676 6.455647 TCGTTACAAATCACACTTCAGAGAT 58.544 36.000 0.00 0.00 0.00 2.75
1565 1677 5.838529 TCGTTACAAATCACACTTCAGAGA 58.161 37.500 0.00 0.00 0.00 3.10
1566 1678 6.525121 TTCGTTACAAATCACACTTCAGAG 57.475 37.500 0.00 0.00 0.00 3.35
1567 1679 6.537301 ACTTTCGTTACAAATCACACTTCAGA 59.463 34.615 0.00 0.00 0.00 3.27
1568 1680 6.628856 CACTTTCGTTACAAATCACACTTCAG 59.371 38.462 0.00 0.00 0.00 3.02
1569 1681 6.482835 CACTTTCGTTACAAATCACACTTCA 58.517 36.000 0.00 0.00 0.00 3.02
1570 1682 5.395486 GCACTTTCGTTACAAATCACACTTC 59.605 40.000 0.00 0.00 0.00 3.01
1571 1683 5.163703 TGCACTTTCGTTACAAATCACACTT 60.164 36.000 0.00 0.00 0.00 3.16
1572 1684 4.334203 TGCACTTTCGTTACAAATCACACT 59.666 37.500 0.00 0.00 0.00 3.55
1573 1685 4.593157 TGCACTTTCGTTACAAATCACAC 58.407 39.130 0.00 0.00 0.00 3.82
1574 1686 4.884458 TGCACTTTCGTTACAAATCACA 57.116 36.364 0.00 0.00 0.00 3.58
1575 1687 6.021596 CCTATGCACTTTCGTTACAAATCAC 58.978 40.000 0.00 0.00 0.00 3.06
1576 1688 5.935206 TCCTATGCACTTTCGTTACAAATCA 59.065 36.000 0.00 0.00 0.00 2.57
1577 1689 6.417191 TCCTATGCACTTTCGTTACAAATC 57.583 37.500 0.00 0.00 0.00 2.17
1578 1690 5.163754 GCTCCTATGCACTTTCGTTACAAAT 60.164 40.000 0.00 0.00 0.00 2.32
1579 1691 4.153475 GCTCCTATGCACTTTCGTTACAAA 59.847 41.667 0.00 0.00 0.00 2.83
1580 1692 3.682858 GCTCCTATGCACTTTCGTTACAA 59.317 43.478 0.00 0.00 0.00 2.41
1581 1693 3.259064 GCTCCTATGCACTTTCGTTACA 58.741 45.455 0.00 0.00 0.00 2.41
1582 1694 3.259064 TGCTCCTATGCACTTTCGTTAC 58.741 45.455 0.00 0.00 38.12 2.50
1583 1695 3.603158 TGCTCCTATGCACTTTCGTTA 57.397 42.857 0.00 0.00 38.12 3.18
1584 1696 2.472695 TGCTCCTATGCACTTTCGTT 57.527 45.000 0.00 0.00 38.12 3.85
1592 1704 2.125147 GCGGTGTGCTCCTATGCA 60.125 61.111 0.00 0.00 41.73 3.96
1593 1705 3.264897 CGCGGTGTGCTCCTATGC 61.265 66.667 0.00 0.00 43.27 3.14
1594 1706 1.878522 GTCGCGGTGTGCTCCTATG 60.879 63.158 6.13 0.00 43.27 2.23
1595 1707 2.494918 GTCGCGGTGTGCTCCTAT 59.505 61.111 6.13 0.00 43.27 2.57
1596 1708 4.111016 CGTCGCGGTGTGCTCCTA 62.111 66.667 6.13 0.00 43.27 2.94
1615 1727 4.512942 GGATAGATAGGATTCCAGTGGGGA 60.513 50.000 9.92 0.00 46.61 4.81
1616 1728 3.777522 GGATAGATAGGATTCCAGTGGGG 59.222 52.174 9.92 0.00 38.37 4.96
1617 1729 4.429505 TGGATAGATAGGATTCCAGTGGG 58.570 47.826 9.92 0.00 33.40 4.61
1618 1730 6.633325 AATGGATAGATAGGATTCCAGTGG 57.367 41.667 1.40 1.40 41.33 4.00
1619 1731 7.456725 ACAAATGGATAGATAGGATTCCAGTG 58.543 38.462 5.29 0.00 41.33 3.66
1620 1732 7.515514 AGACAAATGGATAGATAGGATTCCAGT 59.484 37.037 5.29 0.00 41.33 4.00
1621 1733 7.915930 AGACAAATGGATAGATAGGATTCCAG 58.084 38.462 5.29 0.00 41.33 3.86
1622 1734 7.878621 AGACAAATGGATAGATAGGATTCCA 57.121 36.000 5.29 0.00 42.18 3.53
1623 1735 7.609532 CCAAGACAAATGGATAGATAGGATTCC 59.390 40.741 0.00 0.00 40.56 3.01
1624 1736 7.609532 CCCAAGACAAATGGATAGATAGGATTC 59.390 40.741 0.00 0.00 40.56 2.52
1625 1737 7.295672 TCCCAAGACAAATGGATAGATAGGATT 59.704 37.037 0.00 0.00 40.56 3.01
1626 1738 6.794493 TCCCAAGACAAATGGATAGATAGGAT 59.206 38.462 0.00 0.00 40.56 3.24
1627 1739 6.150332 TCCCAAGACAAATGGATAGATAGGA 58.850 40.000 0.00 0.00 40.56 2.94
1628 1740 6.439636 TCCCAAGACAAATGGATAGATAGG 57.560 41.667 0.00 0.00 40.56 2.57
1629 1741 7.915930 AGATCCCAAGACAAATGGATAGATAG 58.084 38.462 0.00 0.00 40.56 2.08
1630 1742 7.878621 AGATCCCAAGACAAATGGATAGATA 57.121 36.000 0.00 0.00 40.56 1.98
1631 1743 6.776887 AGATCCCAAGACAAATGGATAGAT 57.223 37.500 0.00 0.00 40.56 1.98
1632 1744 6.158520 TGAAGATCCCAAGACAAATGGATAGA 59.841 38.462 0.00 0.00 40.56 1.98
1633 1745 6.359804 TGAAGATCCCAAGACAAATGGATAG 58.640 40.000 0.00 0.00 40.56 2.08
1634 1746 6.325993 TGAAGATCCCAAGACAAATGGATA 57.674 37.500 0.00 0.00 40.56 2.59
1635 1747 5.197224 TGAAGATCCCAAGACAAATGGAT 57.803 39.130 0.00 0.00 40.56 3.41
1636 1748 4.656100 TGAAGATCCCAAGACAAATGGA 57.344 40.909 0.00 0.00 40.56 3.41
1637 1749 4.082026 GGTTGAAGATCCCAAGACAAATGG 60.082 45.833 0.00 0.00 37.71 3.16
1638 1750 4.523943 TGGTTGAAGATCCCAAGACAAATG 59.476 41.667 0.00 0.00 0.00 2.32
1639 1751 4.524328 GTGGTTGAAGATCCCAAGACAAAT 59.476 41.667 0.00 0.00 0.00 2.32
1640 1752 3.888930 GTGGTTGAAGATCCCAAGACAAA 59.111 43.478 0.00 0.00 0.00 2.83
1641 1753 3.138283 AGTGGTTGAAGATCCCAAGACAA 59.862 43.478 0.00 0.00 0.00 3.18
1642 1754 2.711009 AGTGGTTGAAGATCCCAAGACA 59.289 45.455 0.00 0.29 0.00 3.41
1643 1755 3.425162 AGTGGTTGAAGATCCCAAGAC 57.575 47.619 0.00 0.74 0.00 3.01
1644 1756 7.451731 AATATAGTGGTTGAAGATCCCAAGA 57.548 36.000 0.00 0.00 0.00 3.02
1645 1757 7.389053 GCTAATATAGTGGTTGAAGATCCCAAG 59.611 40.741 0.00 0.00 0.00 3.61
1646 1758 7.072454 AGCTAATATAGTGGTTGAAGATCCCAA 59.928 37.037 0.00 0.00 0.00 4.12
1647 1759 6.558775 AGCTAATATAGTGGTTGAAGATCCCA 59.441 38.462 0.00 0.00 0.00 4.37
1648 1760 7.010339 AGCTAATATAGTGGTTGAAGATCCC 57.990 40.000 0.00 0.00 0.00 3.85
1649 1761 7.755822 CGTAGCTAATATAGTGGTTGAAGATCC 59.244 40.741 0.00 0.00 0.00 3.36
1650 1762 8.298140 ACGTAGCTAATATAGTGGTTGAAGATC 58.702 37.037 0.00 0.00 0.00 2.75
1651 1763 8.179509 ACGTAGCTAATATAGTGGTTGAAGAT 57.820 34.615 0.00 0.00 0.00 2.40
1652 1764 7.519488 CGACGTAGCTAATATAGTGGTTGAAGA 60.519 40.741 0.00 0.00 0.00 2.87
1653 1765 6.577800 CGACGTAGCTAATATAGTGGTTGAAG 59.422 42.308 0.00 0.00 0.00 3.02
1654 1766 6.038603 ACGACGTAGCTAATATAGTGGTTGAA 59.961 38.462 0.00 0.00 0.00 2.69
1655 1767 5.528690 ACGACGTAGCTAATATAGTGGTTGA 59.471 40.000 0.00 0.00 0.00 3.18
1656 1768 5.755813 ACGACGTAGCTAATATAGTGGTTG 58.244 41.667 0.00 0.00 0.00 3.77
1657 1769 6.708054 AGTACGACGTAGCTAATATAGTGGTT 59.292 38.462 8.21 0.00 0.00 3.67
1658 1770 6.146837 CAGTACGACGTAGCTAATATAGTGGT 59.853 42.308 8.21 1.76 0.00 4.16
1659 1771 6.532311 CAGTACGACGTAGCTAATATAGTGG 58.468 44.000 8.21 0.00 0.00 4.00
1660 1772 6.014293 GCAGTACGACGTAGCTAATATAGTG 58.986 44.000 8.21 0.08 0.00 2.74
1661 1773 5.698089 TGCAGTACGACGTAGCTAATATAGT 59.302 40.000 17.02 0.00 0.00 2.12
1662 1774 6.161911 TGCAGTACGACGTAGCTAATATAG 57.838 41.667 17.02 4.39 0.00 1.31
1663 1775 6.544038 TTGCAGTACGACGTAGCTAATATA 57.456 37.500 17.02 0.00 0.00 0.86
1664 1776 5.428496 TTGCAGTACGACGTAGCTAATAT 57.572 39.130 17.02 0.00 0.00 1.28
1665 1777 4.880886 TTGCAGTACGACGTAGCTAATA 57.119 40.909 17.02 0.00 0.00 0.98
1666 1778 3.770263 TTGCAGTACGACGTAGCTAAT 57.230 42.857 17.02 0.00 0.00 1.73
1667 1779 3.058016 AGTTTGCAGTACGACGTAGCTAA 60.058 43.478 17.02 13.69 0.00 3.09
1668 1780 2.485426 AGTTTGCAGTACGACGTAGCTA 59.515 45.455 17.02 9.28 0.00 3.32
1669 1781 1.268899 AGTTTGCAGTACGACGTAGCT 59.731 47.619 17.02 11.05 0.00 3.32
1670 1782 1.694639 AGTTTGCAGTACGACGTAGC 58.305 50.000 8.21 10.00 0.00 3.58
1671 1783 5.090757 TGATAAGTTTGCAGTACGACGTAG 58.909 41.667 8.21 0.00 0.00 3.51
1672 1784 5.045668 TGATAAGTTTGCAGTACGACGTA 57.954 39.130 2.97 2.97 0.00 3.57
1673 1785 3.904571 TGATAAGTTTGCAGTACGACGT 58.095 40.909 5.52 5.52 0.00 4.34
1674 1786 4.561213 TGATGATAAGTTTGCAGTACGACG 59.439 41.667 0.00 0.00 0.00 5.12
1675 1787 6.036083 ACATGATGATAAGTTTGCAGTACGAC 59.964 38.462 0.00 0.00 0.00 4.34
1676 1788 6.106003 ACATGATGATAAGTTTGCAGTACGA 58.894 36.000 0.00 0.00 0.00 3.43
1677 1789 6.349973 ACATGATGATAAGTTTGCAGTACG 57.650 37.500 0.00 0.00 0.00 3.67
1678 1790 9.869844 GAATACATGATGATAAGTTTGCAGTAC 57.130 33.333 0.00 0.00 0.00 2.73
1679 1791 9.836864 AGAATACATGATGATAAGTTTGCAGTA 57.163 29.630 0.00 0.00 0.00 2.74
1680 1792 8.743085 AGAATACATGATGATAAGTTTGCAGT 57.257 30.769 0.00 0.00 0.00 4.40
1681 1793 8.833493 TGAGAATACATGATGATAAGTTTGCAG 58.167 33.333 0.00 0.00 0.00 4.41
1682 1794 8.735692 TGAGAATACATGATGATAAGTTTGCA 57.264 30.769 0.00 0.00 0.00 4.08
1691 1803 9.811995 CCAAAACAAATGAGAATACATGATGAT 57.188 29.630 0.00 0.00 0.00 2.45
1692 1804 7.760794 GCCAAAACAAATGAGAATACATGATGA 59.239 33.333 0.00 0.00 0.00 2.92
1693 1805 7.253850 CGCCAAAACAAATGAGAATACATGATG 60.254 37.037 0.00 0.00 0.00 3.07
1694 1806 6.753279 CGCCAAAACAAATGAGAATACATGAT 59.247 34.615 0.00 0.00 0.00 2.45
1695 1807 6.092092 CGCCAAAACAAATGAGAATACATGA 58.908 36.000 0.00 0.00 0.00 3.07
1696 1808 5.863397 ACGCCAAAACAAATGAGAATACATG 59.137 36.000 0.00 0.00 0.00 3.21
1697 1809 6.024552 ACGCCAAAACAAATGAGAATACAT 57.975 33.333 0.00 0.00 0.00 2.29
1698 1810 5.446143 ACGCCAAAACAAATGAGAATACA 57.554 34.783 0.00 0.00 0.00 2.29
1699 1811 9.382244 GATATACGCCAAAACAAATGAGAATAC 57.618 33.333 0.00 0.00 0.00 1.89
1700 1812 9.114952 TGATATACGCCAAAACAAATGAGAATA 57.885 29.630 0.00 0.00 0.00 1.75
1701 1813 7.995289 TGATATACGCCAAAACAAATGAGAAT 58.005 30.769 0.00 0.00 0.00 2.40
1702 1814 7.120579 ACTGATATACGCCAAAACAAATGAGAA 59.879 33.333 0.00 0.00 0.00 2.87
1703 1815 6.597672 ACTGATATACGCCAAAACAAATGAGA 59.402 34.615 0.00 0.00 0.00 3.27
1704 1816 6.785191 ACTGATATACGCCAAAACAAATGAG 58.215 36.000 0.00 0.00 0.00 2.90
1705 1817 6.597672 AGACTGATATACGCCAAAACAAATGA 59.402 34.615 0.00 0.00 0.00 2.57
1706 1818 6.785191 AGACTGATATACGCCAAAACAAATG 58.215 36.000 0.00 0.00 0.00 2.32
1707 1819 7.391148 AAGACTGATATACGCCAAAACAAAT 57.609 32.000 0.00 0.00 0.00 2.32
1708 1820 6.811253 AAGACTGATATACGCCAAAACAAA 57.189 33.333 0.00 0.00 0.00 2.83
1709 1821 6.811253 AAAGACTGATATACGCCAAAACAA 57.189 33.333 0.00 0.00 0.00 2.83
1710 1822 7.908827 TTAAAGACTGATATACGCCAAAACA 57.091 32.000 0.00 0.00 0.00 2.83
1711 1823 9.783256 AAATTAAAGACTGATATACGCCAAAAC 57.217 29.630 0.00 0.00 0.00 2.43
1715 1827 8.757789 CGTAAAATTAAAGACTGATATACGCCA 58.242 33.333 0.00 0.00 0.00 5.69
1717 1829 8.623658 GCGTAAAATTAAAGACTGATATACGC 57.376 34.615 0.00 0.00 46.88 4.42
1718 1830 7.943065 CCGCGTAAAATTAAAGACTGATATACG 59.057 37.037 4.92 0.00 36.45 3.06
1719 1831 8.758715 ACCGCGTAAAATTAAAGACTGATATAC 58.241 33.333 4.92 0.00 0.00 1.47
1720 1832 8.876275 ACCGCGTAAAATTAAAGACTGATATA 57.124 30.769 4.92 0.00 0.00 0.86
1721 1833 7.781548 ACCGCGTAAAATTAAAGACTGATAT 57.218 32.000 4.92 0.00 0.00 1.63
1722 1834 7.201548 GGAACCGCGTAAAATTAAAGACTGATA 60.202 37.037 4.92 0.00 0.00 2.15
1723 1835 6.402875 GGAACCGCGTAAAATTAAAGACTGAT 60.403 38.462 4.92 0.00 0.00 2.90
1724 1836 5.106987 GGAACCGCGTAAAATTAAAGACTGA 60.107 40.000 4.92 0.00 0.00 3.41
1725 1837 5.084055 GGAACCGCGTAAAATTAAAGACTG 58.916 41.667 4.92 0.00 0.00 3.51
1726 1838 4.756135 TGGAACCGCGTAAAATTAAAGACT 59.244 37.500 4.92 0.00 0.00 3.24
1727 1839 5.033326 TGGAACCGCGTAAAATTAAAGAC 57.967 39.130 4.92 0.00 0.00 3.01
1728 1840 5.883503 ATGGAACCGCGTAAAATTAAAGA 57.116 34.783 4.92 0.00 0.00 2.52
1729 1841 6.778108 AGTATGGAACCGCGTAAAATTAAAG 58.222 36.000 4.92 0.00 0.00 1.85
1730 1842 6.370994 TGAGTATGGAACCGCGTAAAATTAAA 59.629 34.615 4.92 0.00 0.00 1.52
1731 1843 5.873712 TGAGTATGGAACCGCGTAAAATTAA 59.126 36.000 4.92 0.00 0.00 1.40
1732 1844 5.291614 GTGAGTATGGAACCGCGTAAAATTA 59.708 40.000 4.92 0.00 0.00 1.40
1733 1845 4.093850 GTGAGTATGGAACCGCGTAAAATT 59.906 41.667 4.92 0.00 0.00 1.82
1734 1846 3.619929 GTGAGTATGGAACCGCGTAAAAT 59.380 43.478 4.92 0.00 0.00 1.82
1735 1847 2.995258 GTGAGTATGGAACCGCGTAAAA 59.005 45.455 4.92 0.00 0.00 1.52
1736 1848 2.231964 AGTGAGTATGGAACCGCGTAAA 59.768 45.455 4.92 0.00 0.00 2.01
1737 1849 1.820519 AGTGAGTATGGAACCGCGTAA 59.179 47.619 4.92 0.00 0.00 3.18
1738 1850 1.466856 AGTGAGTATGGAACCGCGTA 58.533 50.000 4.92 0.00 0.00 4.42
1739 1851 1.404391 CTAGTGAGTATGGAACCGCGT 59.596 52.381 4.92 0.00 0.00 6.01
1740 1852 1.404391 ACTAGTGAGTATGGAACCGCG 59.596 52.381 0.00 0.00 32.65 6.46
1741 1853 2.165845 ACACTAGTGAGTATGGAACCGC 59.834 50.000 29.30 0.00 33.32 5.68
1755 1867 3.596066 CTGGCTGCCGCACACTAGT 62.596 63.158 14.98 0.00 38.10 2.57
1756 1868 2.816958 CTGGCTGCCGCACACTAG 60.817 66.667 14.98 0.00 38.10 2.57
1757 1869 4.393155 CCTGGCTGCCGCACACTA 62.393 66.667 14.98 0.00 38.10 2.74
1766 1878 3.492353 TGGATAGGCCCTGGCTGC 61.492 66.667 8.29 0.00 39.30 5.25
1767 1879 2.512896 GTGGATAGGCCCTGGCTG 59.487 66.667 8.29 0.00 39.30 4.85
1768 1880 2.774351 GGTGGATAGGCCCTGGCT 60.774 66.667 8.29 0.00 42.39 4.75
1769 1881 2.774351 AGGTGGATAGGCCCTGGC 60.774 66.667 0.00 0.00 41.06 4.85
1770 1882 0.988145 TTGAGGTGGATAGGCCCTGG 60.988 60.000 0.00 0.00 34.97 4.45
1771 1883 0.181350 GTTGAGGTGGATAGGCCCTG 59.819 60.000 0.00 0.00 34.97 4.45
1772 1884 0.044855 AGTTGAGGTGGATAGGCCCT 59.955 55.000 0.00 0.00 34.97 5.19
1773 1885 1.802553 TAGTTGAGGTGGATAGGCCC 58.197 55.000 0.00 0.00 34.97 5.80
1774 1886 2.104963 CCTTAGTTGAGGTGGATAGGCC 59.895 54.545 0.00 0.00 31.89 5.19
1775 1887 2.104963 CCCTTAGTTGAGGTGGATAGGC 59.895 54.545 0.00 0.00 34.88 3.93
1776 1888 2.104963 GCCCTTAGTTGAGGTGGATAGG 59.895 54.545 0.00 0.00 34.88 2.57
1777 1889 2.771943 TGCCCTTAGTTGAGGTGGATAG 59.228 50.000 0.00 0.00 34.88 2.08
1778 1890 2.840511 TGCCCTTAGTTGAGGTGGATA 58.159 47.619 0.00 0.00 34.88 2.59
1779 1891 1.668826 TGCCCTTAGTTGAGGTGGAT 58.331 50.000 0.00 0.00 34.88 3.41
1780 1892 1.559682 GATGCCCTTAGTTGAGGTGGA 59.440 52.381 0.00 0.00 34.88 4.02
1781 1893 1.561542 AGATGCCCTTAGTTGAGGTGG 59.438 52.381 0.00 0.00 34.88 4.61
1782 1894 2.420687 GGAGATGCCCTTAGTTGAGGTG 60.421 54.545 0.00 0.00 34.88 4.00
1783 1895 1.840635 GGAGATGCCCTTAGTTGAGGT 59.159 52.381 0.00 0.00 34.88 3.85
1784 1896 1.839994 TGGAGATGCCCTTAGTTGAGG 59.160 52.381 0.00 0.00 36.52 3.86
1785 1897 2.744494 GCTGGAGATGCCCTTAGTTGAG 60.744 54.545 0.00 0.00 34.97 3.02
1786 1898 1.210478 GCTGGAGATGCCCTTAGTTGA 59.790 52.381 0.00 0.00 34.97 3.18
1787 1899 1.673168 GCTGGAGATGCCCTTAGTTG 58.327 55.000 0.00 0.00 34.97 3.16
1788 1900 0.548510 GGCTGGAGATGCCCTTAGTT 59.451 55.000 0.00 0.00 44.32 2.24
1789 1901 2.225792 GGCTGGAGATGCCCTTAGT 58.774 57.895 0.00 0.00 44.32 2.24
1796 1908 2.202987 CGACTGGGCTGGAGATGC 60.203 66.667 0.00 0.00 0.00 3.91
1797 1909 2.202987 GCGACTGGGCTGGAGATG 60.203 66.667 0.00 0.00 0.00 2.90
1798 1910 3.842923 CGCGACTGGGCTGGAGAT 61.843 66.667 0.00 0.00 0.00 2.75
1807 1919 4.069232 TTCTGAGGGCGCGACTGG 62.069 66.667 13.91 0.00 0.00 4.00
1808 1920 2.811317 GTTCTGAGGGCGCGACTG 60.811 66.667 13.91 0.00 0.00 3.51
1809 1921 4.421479 CGTTCTGAGGGCGCGACT 62.421 66.667 13.91 7.89 0.00 4.18
1815 1927 1.305930 ATTTTCGGCGTTCTGAGGGC 61.306 55.000 6.85 0.00 0.00 5.19
1816 1928 0.727398 GATTTTCGGCGTTCTGAGGG 59.273 55.000 6.85 0.00 0.00 4.30
1817 1929 0.370273 CGATTTTCGGCGTTCTGAGG 59.630 55.000 6.85 0.00 36.00 3.86
1818 1930 0.247301 GCGATTTTCGGCGTTCTGAG 60.247 55.000 6.85 0.00 40.84 3.35
1819 1931 1.785321 GCGATTTTCGGCGTTCTGA 59.215 52.632 6.85 0.00 40.84 3.27
1820 1932 4.342964 GCGATTTTCGGCGTTCTG 57.657 55.556 6.85 0.00 40.84 3.02
1828 1940 2.398036 CCGAACCGGCGATTTTCG 59.602 61.111 22.71 22.71 41.17 3.46
1864 1976 4.717313 GGGGTTCGGCCTGTGACC 62.717 72.222 0.00 3.02 37.43 4.02
1884 1996 4.785453 CCAACTCCTCCCCAGCGC 62.785 72.222 0.00 0.00 0.00 5.92
1885 1997 4.101448 CCCAACTCCTCCCCAGCG 62.101 72.222 0.00 0.00 0.00 5.18
1886 1998 3.732849 CCCCAACTCCTCCCCAGC 61.733 72.222 0.00 0.00 0.00 4.85
1887 1999 3.017581 CCCCCAACTCCTCCCCAG 61.018 72.222 0.00 0.00 0.00 4.45
1890 2002 3.412408 GAGCCCCCAACTCCTCCC 61.412 72.222 0.00 0.00 0.00 4.30
1904 2016 3.675619 TTTTCCCTAGCGCCGGAGC 62.676 63.158 23.92 23.92 37.41 4.70
1905 2017 1.521681 CTTTTCCCTAGCGCCGGAG 60.522 63.158 5.05 1.55 0.00 4.63
1906 2018 2.582436 CTTTTCCCTAGCGCCGGA 59.418 61.111 5.05 9.50 0.00 5.14
1907 2019 3.202706 GCTTTTCCCTAGCGCCGG 61.203 66.667 2.29 4.78 0.00 6.13
1908 2020 2.435938 TGCTTTTCCCTAGCGCCG 60.436 61.111 2.29 0.00 41.54 6.46
1909 2021 2.750888 CGTGCTTTTCCCTAGCGCC 61.751 63.158 2.29 0.00 44.22 6.53
1910 2022 2.785258 CGTGCTTTTCCCTAGCGC 59.215 61.111 0.00 0.00 43.78 5.92
1911 2023 2.750888 GGCGTGCTTTTCCCTAGCG 61.751 63.158 0.00 0.00 41.54 4.26
1912 2024 1.377333 AGGCGTGCTTTTCCCTAGC 60.377 57.895 0.00 0.00 39.10 3.42
1913 2025 1.026718 CCAGGCGTGCTTTTCCCTAG 61.027 60.000 0.00 0.00 0.00 3.02
1914 2026 1.002624 CCAGGCGTGCTTTTCCCTA 60.003 57.895 0.00 0.00 0.00 3.53
1915 2027 2.282462 CCAGGCGTGCTTTTCCCT 60.282 61.111 0.00 0.00 0.00 4.20
1916 2028 4.056125 GCCAGGCGTGCTTTTCCC 62.056 66.667 0.00 0.00 0.00 3.97
1917 2029 4.056125 GGCCAGGCGTGCTTTTCC 62.056 66.667 5.00 0.00 0.00 3.13
1918 2030 4.056125 GGGCCAGGCGTGCTTTTC 62.056 66.667 4.39 0.00 0.00 2.29
1919 2031 4.912395 TGGGCCAGGCGTGCTTTT 62.912 61.111 0.00 0.00 0.00 2.27
1928 2040 4.704833 CTGTCGGTGTGGGCCAGG 62.705 72.222 6.40 0.00 0.00 4.45
1929 2041 4.704833 CCTGTCGGTGTGGGCCAG 62.705 72.222 6.40 0.00 0.00 4.85
1933 2045 2.346284 TTTTCCCCTGTCGGTGTGGG 62.346 60.000 0.00 0.00 40.59 4.61
1934 2046 0.889186 CTTTTCCCCTGTCGGTGTGG 60.889 60.000 0.00 0.00 0.00 4.17
1935 2047 0.179029 ACTTTTCCCCTGTCGGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
1936 2048 0.108019 GACTTTTCCCCTGTCGGTGT 59.892 55.000 0.00 0.00 0.00 4.16
1937 2049 0.107831 TGACTTTTCCCCTGTCGGTG 59.892 55.000 0.00 0.00 33.81 4.94
1938 2050 0.841289 TTGACTTTTCCCCTGTCGGT 59.159 50.000 0.00 0.00 33.81 4.69
1939 2051 1.523758 CTTGACTTTTCCCCTGTCGG 58.476 55.000 0.00 0.00 33.81 4.79
1940 2052 1.202770 ACCTTGACTTTTCCCCTGTCG 60.203 52.381 0.00 0.00 33.81 4.35
1941 2053 2.658807 ACCTTGACTTTTCCCCTGTC 57.341 50.000 0.00 0.00 0.00 3.51
1942 2054 3.398318 AAACCTTGACTTTTCCCCTGT 57.602 42.857 0.00 0.00 0.00 4.00
1943 2055 3.960755 AGAAAACCTTGACTTTTCCCCTG 59.039 43.478 0.00 0.00 38.05 4.45
1944 2056 4.265856 AGAAAACCTTGACTTTTCCCCT 57.734 40.909 0.00 0.00 38.05 4.79
1945 2057 4.202223 GGAAGAAAACCTTGACTTTTCCCC 60.202 45.833 0.00 0.00 38.05 4.81
1946 2058 4.202223 GGGAAGAAAACCTTGACTTTTCCC 60.202 45.833 3.46 3.46 43.91 3.97
1947 2059 4.202223 GGGGAAGAAAACCTTGACTTTTCC 60.202 45.833 0.00 0.00 38.05 3.13
1948 2060 4.202223 GGGGGAAGAAAACCTTGACTTTTC 60.202 45.833 0.00 0.00 37.73 2.29
1949 2061 3.709653 GGGGGAAGAAAACCTTGACTTTT 59.290 43.478 0.00 0.00 34.68 2.27
1950 2062 3.305720 GGGGGAAGAAAACCTTGACTTT 58.694 45.455 0.00 0.00 34.68 2.66
1951 2063 2.751816 CGGGGGAAGAAAACCTTGACTT 60.752 50.000 0.00 0.00 34.68 3.01
1952 2064 1.202891 CGGGGGAAGAAAACCTTGACT 60.203 52.381 0.00 0.00 34.68 3.41
1953 2065 1.202842 TCGGGGGAAGAAAACCTTGAC 60.203 52.381 0.00 0.00 34.68 3.18
1954 2066 1.142060 TCGGGGGAAGAAAACCTTGA 58.858 50.000 0.00 0.00 34.68 3.02
1955 2067 1.202891 AGTCGGGGGAAGAAAACCTTG 60.203 52.381 0.00 0.00 34.68 3.61
1956 2068 1.073444 GAGTCGGGGGAAGAAAACCTT 59.927 52.381 0.00 0.00 37.93 3.50
1957 2069 0.691332 GAGTCGGGGGAAGAAAACCT 59.309 55.000 0.00 0.00 0.00 3.50
1958 2070 0.672711 CGAGTCGGGGGAAGAAAACC 60.673 60.000 4.10 0.00 0.00 3.27
1959 2071 1.296755 GCGAGTCGGGGGAAGAAAAC 61.297 60.000 15.52 0.00 0.00 2.43
1960 2072 1.004200 GCGAGTCGGGGGAAGAAAA 60.004 57.895 15.52 0.00 0.00 2.29
1961 2073 2.660802 GCGAGTCGGGGGAAGAAA 59.339 61.111 15.52 0.00 0.00 2.52
1962 2074 3.387947 GGCGAGTCGGGGGAAGAA 61.388 66.667 15.52 0.00 0.00 2.52
1963 2075 4.377760 AGGCGAGTCGGGGGAAGA 62.378 66.667 15.52 0.00 0.00 2.87
1964 2076 3.839432 GAGGCGAGTCGGGGGAAG 61.839 72.222 15.52 0.00 0.00 3.46
1994 2106 4.162690 GCTAGTGGTGGCCGAGGG 62.163 72.222 0.00 0.00 0.00 4.30
1995 2107 1.115930 ATAGCTAGTGGTGGCCGAGG 61.116 60.000 0.00 0.00 0.00 4.63
1996 2108 1.617322 TATAGCTAGTGGTGGCCGAG 58.383 55.000 0.00 0.00 0.00 4.63
1997 2109 2.168496 GATATAGCTAGTGGTGGCCGA 58.832 52.381 0.00 0.00 0.00 5.54
1998 2110 1.204941 GGATATAGCTAGTGGTGGCCG 59.795 57.143 0.00 0.00 0.00 6.13
1999 2111 1.555533 GGGATATAGCTAGTGGTGGCC 59.444 57.143 0.00 0.00 0.00 5.36
2000 2112 1.204941 CGGGATATAGCTAGTGGTGGC 59.795 57.143 0.00 0.00 0.00 5.01
2001 2113 1.825474 CCGGGATATAGCTAGTGGTGG 59.175 57.143 0.00 0.00 0.00 4.61
2002 2114 1.204941 GCCGGGATATAGCTAGTGGTG 59.795 57.143 2.18 0.00 0.00 4.17
2003 2115 1.558233 GCCGGGATATAGCTAGTGGT 58.442 55.000 2.18 0.00 0.00 4.16
2004 2116 0.456221 CGCCGGGATATAGCTAGTGG 59.544 60.000 2.18 0.00 0.00 4.00
2005 2117 1.460504 TCGCCGGGATATAGCTAGTG 58.539 55.000 2.18 0.00 0.00 2.74
2006 2118 2.025155 CATCGCCGGGATATAGCTAGT 58.975 52.381 2.18 0.00 32.85 2.57
2007 2119 1.338337 CCATCGCCGGGATATAGCTAG 59.662 57.143 2.18 0.00 32.85 3.42
2008 2120 1.399714 CCATCGCCGGGATATAGCTA 58.600 55.000 2.18 0.00 32.85 3.32
2009 2121 1.961180 GCCATCGCCGGGATATAGCT 61.961 60.000 2.18 0.00 32.85 3.32
2010 2122 1.521681 GCCATCGCCGGGATATAGC 60.522 63.158 2.18 4.99 32.85 2.97
2011 2123 4.835927 GCCATCGCCGGGATATAG 57.164 61.111 2.18 0.00 32.85 1.31
2030 2142 3.979739 CTAGCGGAGTAGGGCGGC 61.980 72.222 0.00 0.00 0.00 6.53
2031 2143 0.322277 TATCTAGCGGAGTAGGGCGG 60.322 60.000 0.00 0.00 0.00 6.13
2032 2144 1.088306 CTATCTAGCGGAGTAGGGCG 58.912 60.000 0.00 0.00 0.00 6.13
2033 2145 0.812549 GCTATCTAGCGGAGTAGGGC 59.187 60.000 0.00 0.00 39.82 5.19
2044 2156 0.250513 GGCGGGGAATGGCTATCTAG 59.749 60.000 0.00 0.00 0.00 2.43
2045 2157 1.541310 CGGCGGGGAATGGCTATCTA 61.541 60.000 0.00 0.00 0.00 1.98
2046 2158 2.883828 CGGCGGGGAATGGCTATCT 61.884 63.158 0.00 0.00 0.00 1.98
2047 2159 2.358737 CGGCGGGGAATGGCTATC 60.359 66.667 0.00 0.00 0.00 2.08
2048 2160 1.990160 TTTCGGCGGGGAATGGCTAT 61.990 55.000 7.21 0.00 0.00 2.97
2049 2161 2.199613 TTTTCGGCGGGGAATGGCTA 62.200 55.000 7.21 0.00 0.00 3.93
2050 2162 3.577334 TTTTCGGCGGGGAATGGCT 62.577 57.895 7.21 0.00 0.00 4.75
2051 2163 1.955495 ATTTTTCGGCGGGGAATGGC 61.955 55.000 7.21 0.00 0.00 4.40
2052 2164 1.336755 CTATTTTTCGGCGGGGAATGG 59.663 52.381 7.21 3.19 0.00 3.16
2053 2165 1.269051 GCTATTTTTCGGCGGGGAATG 60.269 52.381 7.21 2.06 0.00 2.67
2054 2166 1.029681 GCTATTTTTCGGCGGGGAAT 58.970 50.000 7.21 7.37 0.00 3.01
2055 2167 0.322636 TGCTATTTTTCGGCGGGGAA 60.323 50.000 7.21 0.00 0.00 3.97
2056 2168 0.746563 CTGCTATTTTTCGGCGGGGA 60.747 55.000 7.21 0.00 0.00 4.81
2057 2169 1.727467 CTGCTATTTTTCGGCGGGG 59.273 57.895 7.21 0.00 0.00 5.73
2058 2170 1.064134 GCTGCTATTTTTCGGCGGG 59.936 57.895 7.21 0.00 33.44 6.13
2059 2171 4.690159 GCTGCTATTTTTCGGCGG 57.310 55.556 7.21 0.00 35.66 6.13
2061 2173 0.179163 AAGCGCTGCTATTTTTCGGC 60.179 50.000 12.58 0.00 38.25 5.54
2062 2174 1.815132 GAAGCGCTGCTATTTTTCGG 58.185 50.000 12.58 0.00 38.25 4.30
2063 2175 1.446731 CGAAGCGCTGCTATTTTTCG 58.553 50.000 12.58 10.47 38.25 3.46
2099 2211 3.259425 GAAACGCCCAGCTGCTGTG 62.259 63.158 26.41 17.87 0.00 3.66
2100 2212 2.980233 GAAACGCCCAGCTGCTGT 60.980 61.111 26.41 8.37 0.00 4.40
2101 2213 3.741476 GGAAACGCCCAGCTGCTG 61.741 66.667 22.44 22.44 0.00 4.41
2135 2247 2.739287 TTAAACCGCGCCTCCACG 60.739 61.111 0.00 0.00 0.00 4.94
2136 2248 2.865308 GTTAAACCGCGCCTCCAC 59.135 61.111 0.00 0.00 0.00 4.02
2137 2249 2.739287 CGTTAAACCGCGCCTCCA 60.739 61.111 0.00 0.00 0.00 3.86
2138 2250 3.493440 CCGTTAAACCGCGCCTCC 61.493 66.667 0.00 0.00 0.00 4.30
2139 2251 4.156622 GCCGTTAAACCGCGCCTC 62.157 66.667 0.00 0.00 0.00 4.70
2144 2256 2.434011 TACCCGCCGTTAAACCGC 60.434 61.111 0.00 0.00 0.00 5.68
2145 2257 1.373999 TGTACCCGCCGTTAAACCG 60.374 57.895 0.00 0.00 0.00 4.44
2146 2258 1.625759 CGTGTACCCGCCGTTAAACC 61.626 60.000 0.00 0.00 0.00 3.27
2147 2259 1.780931 CGTGTACCCGCCGTTAAAC 59.219 57.895 0.00 0.00 0.00 2.01
2148 2260 4.258502 CGTGTACCCGCCGTTAAA 57.741 55.556 0.00 0.00 0.00 1.52
2169 2281 2.665185 GAACACCTTGCGCTCGGT 60.665 61.111 9.73 12.43 0.00 4.69
2170 2282 3.777925 CGAACACCTTGCGCTCGG 61.778 66.667 9.73 11.69 0.00 4.63
2171 2283 3.777925 CCGAACACCTTGCGCTCG 61.778 66.667 9.73 7.54 0.00 5.03
2172 2284 4.090057 GCCGAACACCTTGCGCTC 62.090 66.667 9.73 0.00 0.00 5.03
2176 2288 1.065109 AAAACGCCGAACACCTTGC 59.935 52.632 0.00 0.00 0.00 4.01
2177 2289 1.206115 GCAAAACGCCGAACACCTTG 61.206 55.000 0.00 0.00 32.94 3.61
2178 2290 1.065109 GCAAAACGCCGAACACCTT 59.935 52.632 0.00 0.00 32.94 3.50
2179 2291 2.719354 GCAAAACGCCGAACACCT 59.281 55.556 0.00 0.00 32.94 4.00
2188 2300 2.556287 CCGAGACAGGCAAAACGC 59.444 61.111 0.00 0.00 41.28 4.84
2196 2308 2.105128 GTCCATCGCCGAGACAGG 59.895 66.667 2.03 0.00 0.00 4.00
2197 2309 1.064946 GAGTCCATCGCCGAGACAG 59.935 63.158 8.87 0.00 32.82 3.51
2198 2310 2.761195 CGAGTCCATCGCCGAGACA 61.761 63.158 8.87 0.00 45.98 3.41
2199 2311 2.024871 CGAGTCCATCGCCGAGAC 59.975 66.667 0.00 0.00 45.98 3.36
2207 2319 0.965439 CCTCCTCATCCGAGTCCATC 59.035 60.000 0.00 0.00 37.59 3.51
2208 2320 0.558220 TCCTCCTCATCCGAGTCCAT 59.442 55.000 0.00 0.00 37.59 3.41
2209 2321 0.335019 TTCCTCCTCATCCGAGTCCA 59.665 55.000 0.00 0.00 37.59 4.02
2210 2322 1.036707 CTTCCTCCTCATCCGAGTCC 58.963 60.000 0.00 0.00 37.59 3.85
2211 2323 1.953686 CTCTTCCTCCTCATCCGAGTC 59.046 57.143 0.00 0.00 37.59 3.36
2212 2324 2.026905 GCTCTTCCTCCTCATCCGAGT 61.027 57.143 0.00 0.00 37.59 4.18
2213 2325 0.673437 GCTCTTCCTCCTCATCCGAG 59.327 60.000 0.00 0.00 39.16 4.63
2214 2326 0.260230 AGCTCTTCCTCCTCATCCGA 59.740 55.000 0.00 0.00 0.00 4.55
2215 2327 0.673437 GAGCTCTTCCTCCTCATCCG 59.327 60.000 6.43 0.00 0.00 4.18
2216 2328 0.673437 CGAGCTCTTCCTCCTCATCC 59.327 60.000 12.85 0.00 0.00 3.51
2217 2329 0.031994 GCGAGCTCTTCCTCCTCATC 59.968 60.000 12.85 0.00 0.00 2.92
2218 2330 1.398958 GGCGAGCTCTTCCTCCTCAT 61.399 60.000 12.85 0.00 0.00 2.90
2219 2331 2.055042 GGCGAGCTCTTCCTCCTCA 61.055 63.158 12.85 0.00 0.00 3.86
2220 2332 2.811799 GGCGAGCTCTTCCTCCTC 59.188 66.667 12.85 0.00 0.00 3.71
2221 2333 3.144193 CGGCGAGCTCTTCCTCCT 61.144 66.667 12.85 0.00 0.00 3.69
2222 2334 4.882396 GCGGCGAGCTCTTCCTCC 62.882 72.222 12.98 4.19 44.04 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.