Multiple sequence alignment - TraesCS5A01G010000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G010000 chr5A 100.000 2711 0 0 1 2711 6668462 6665752 0.000000e+00 5007.0
1 TraesCS5A01G010000 chr5A 82.991 341 40 10 427 767 538878850 538879172 2.640000e-75 292.0
2 TraesCS5A01G010000 chr5D 91.315 1612 88 19 443 2036 8494167 8492590 0.000000e+00 2154.0
3 TraesCS5A01G010000 chr5D 81.560 282 20 22 99 363 8494566 8494300 1.270000e-48 204.0
4 TraesCS5A01G010000 chr5D 89.552 67 1 2 38 98 8494661 8494595 2.240000e-11 80.5
5 TraesCS5A01G010000 chr5B 93.047 1280 64 12 770 2044 8877032 8875773 0.000000e+00 1847.0
6 TraesCS5A01G010000 chr5B 77.202 193 19 13 38 216 8900724 8900543 3.720000e-14 89.8
7 TraesCS5A01G010000 chr5B 95.652 46 1 1 2363 2407 8874884 8874839 3.740000e-09 73.1
8 TraesCS5A01G010000 chr5B 80.769 104 11 4 534 636 8877143 8877048 3.740000e-09 73.1
9 TraesCS5A01G010000 chr3B 95.899 317 11 2 2396 2711 310863549 310863864 1.860000e-141 512.0
10 TraesCS5A01G010000 chr3A 96.393 305 10 1 2407 2711 23267769 23267466 4.030000e-138 501.0
11 TraesCS5A01G010000 chr7A 95.779 308 11 2 2404 2711 13136709 13137014 1.870000e-136 496.0
12 TraesCS5A01G010000 chr7A 95.724 304 12 1 2408 2711 121912798 121912496 3.140000e-134 488.0
13 TraesCS5A01G010000 chr7A 94.737 304 15 1 2408 2711 220114463 220114765 3.160000e-129 472.0
14 TraesCS5A01G010000 chr7A 92.971 313 21 1 2399 2711 59390797 59391108 3.180000e-124 455.0
15 TraesCS5A01G010000 chr1A 95.410 305 12 2 2407 2711 292579487 292579789 4.060000e-133 484.0
16 TraesCS5A01G010000 chr1A 83.626 342 41 8 426 767 118062023 118062349 9.430000e-80 307.0
17 TraesCS5A01G010000 chr1A 83.817 241 23 4 780 1012 118062272 118062504 5.880000e-52 215.0
18 TraesCS5A01G010000 chr1A 80.000 125 17 6 185 302 118061709 118061832 4.810000e-13 86.1
19 TraesCS5A01G010000 chr2A 94.118 306 16 2 2407 2711 695651672 695651368 5.290000e-127 464.0
20 TraesCS5A01G010000 chr6A 93.770 305 18 1 2407 2711 410320567 410320870 8.850000e-125 457.0
21 TraesCS5A01G010000 chr6A 82.698 341 41 10 427 767 11526511 11526833 1.230000e-73 287.0
22 TraesCS5A01G010000 chr6A 81.121 339 49 8 429 767 540644573 540644250 9.630000e-65 257.0
23 TraesCS5A01G010000 chr6A 82.031 128 13 7 185 304 11526196 11526321 1.720000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G010000 chr5A 6665752 6668462 2710 True 5007.000000 5007 100.000000 1 2711 1 chr5A.!!$R1 2710
1 TraesCS5A01G010000 chr5D 8492590 8494661 2071 True 812.833333 2154 87.475667 38 2036 3 chr5D.!!$R1 1998
2 TraesCS5A01G010000 chr5B 8874839 8877143 2304 True 664.400000 1847 89.822667 534 2407 3 chr5B.!!$R2 1873
3 TraesCS5A01G010000 chr1A 118061709 118062504 795 False 202.700000 307 82.481000 185 1012 3 chr1A.!!$F2 827

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
173 213 0.105709 CCCTCCCCTCTCCTTCTCTC 60.106 65.0 0.0 0.0 0.0 3.2 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2163 2703 0.415429 ACTCCAGAGGTCTCCCACAT 59.585 55.0 0.0 0.0 0.0 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.854286 ACGAATTAATAAAGCCTCGCG 57.146 42.857 0.00 0.00 0.00 5.87
22 23 3.450578 ACGAATTAATAAAGCCTCGCGA 58.549 40.909 9.26 9.26 0.00 5.87
23 24 3.244579 ACGAATTAATAAAGCCTCGCGAC 59.755 43.478 3.71 0.00 0.00 5.19
24 25 3.658342 CGAATTAATAAAGCCTCGCGACG 60.658 47.826 3.71 1.73 0.00 5.12
25 26 2.282701 TTAATAAAGCCTCGCGACGT 57.717 45.000 3.71 0.00 0.00 4.34
26 27 2.282701 TAATAAAGCCTCGCGACGTT 57.717 45.000 3.71 3.68 0.00 3.99
27 28 0.719465 AATAAAGCCTCGCGACGTTG 59.281 50.000 3.71 0.00 0.00 4.10
28 29 1.693083 ATAAAGCCTCGCGACGTTGC 61.693 55.000 18.25 18.25 0.00 4.17
31 32 4.789075 GCCTCGCGACGTTGCCTA 62.789 66.667 21.95 9.58 0.00 3.93
32 33 2.126228 CCTCGCGACGTTGCCTAA 60.126 61.111 21.95 7.06 0.00 2.69
33 34 1.735198 CCTCGCGACGTTGCCTAAA 60.735 57.895 21.95 4.59 0.00 1.85
34 35 1.286354 CCTCGCGACGTTGCCTAAAA 61.286 55.000 21.95 2.15 0.00 1.52
35 36 0.509499 CTCGCGACGTTGCCTAAAAA 59.491 50.000 21.95 0.43 0.00 1.94
121 156 6.127196 GGTTCATACTCTCCTTGTCATCTTCT 60.127 42.308 0.00 0.00 0.00 2.85
124 159 4.817318 ACTCTCCTTGTCATCTTCTTCC 57.183 45.455 0.00 0.00 0.00 3.46
146 186 1.228124 CCACTTGTTCCCCGAAGCA 60.228 57.895 0.00 0.00 0.00 3.91
155 195 2.107141 CCCGAAGCATCTCGTCCC 59.893 66.667 2.80 0.00 37.11 4.46
160 200 2.034048 GAAGCATCTCGTCCCCTCCC 62.034 65.000 0.00 0.00 0.00 4.30
164 204 2.015726 ATCTCGTCCCCTCCCCTCT 61.016 63.158 0.00 0.00 0.00 3.69
166 206 3.742248 CTCGTCCCCTCCCCTCTCC 62.742 73.684 0.00 0.00 0.00 3.71
167 207 3.756783 CGTCCCCTCCCCTCTCCT 61.757 72.222 0.00 0.00 0.00 3.69
168 208 2.788589 GTCCCCTCCCCTCTCCTT 59.211 66.667 0.00 0.00 0.00 3.36
169 209 1.383386 GTCCCCTCCCCTCTCCTTC 60.383 68.421 0.00 0.00 0.00 3.46
170 210 1.550374 TCCCCTCCCCTCTCCTTCT 60.550 63.158 0.00 0.00 0.00 2.85
171 211 1.074850 CCCCTCCCCTCTCCTTCTC 60.075 68.421 0.00 0.00 0.00 2.87
172 212 1.598856 CCCCTCCCCTCTCCTTCTCT 61.599 65.000 0.00 0.00 0.00 3.10
173 213 0.105709 CCCTCCCCTCTCCTTCTCTC 60.106 65.000 0.00 0.00 0.00 3.20
174 214 0.467290 CCTCCCCTCTCCTTCTCTCG 60.467 65.000 0.00 0.00 0.00 4.04
175 215 1.076632 TCCCCTCTCCTTCTCTCGC 60.077 63.158 0.00 0.00 0.00 5.03
176 216 1.380515 CCCCTCTCCTTCTCTCGCA 60.381 63.158 0.00 0.00 0.00 5.10
177 217 1.671901 CCCCTCTCCTTCTCTCGCAC 61.672 65.000 0.00 0.00 0.00 5.34
178 218 1.671901 CCCTCTCCTTCTCTCGCACC 61.672 65.000 0.00 0.00 0.00 5.01
179 219 1.431440 CTCTCCTTCTCTCGCACCG 59.569 63.158 0.00 0.00 0.00 4.94
180 220 2.202676 CTCCTTCTCTCGCACCGC 60.203 66.667 0.00 0.00 0.00 5.68
181 221 3.708220 CTCCTTCTCTCGCACCGCC 62.708 68.421 0.00 0.00 0.00 6.13
238 292 1.602771 GTAAGCAGTCCCACCCTCC 59.397 63.158 0.00 0.00 0.00 4.30
339 415 4.587189 CCGCCCGATTCCTCGTCC 62.587 72.222 0.00 0.00 43.49 4.79
366 442 3.470888 GAGCGCCTCCTTGCCCTA 61.471 66.667 2.29 0.00 0.00 3.53
369 445 3.083997 CGCCTCCTTGCCCTAGGT 61.084 66.667 8.29 0.00 36.63 3.08
371 447 1.690985 GCCTCCTTGCCCTAGGTCT 60.691 63.158 8.29 0.00 36.63 3.85
372 448 1.275421 GCCTCCTTGCCCTAGGTCTT 61.275 60.000 8.29 0.00 36.63 3.01
417 566 4.710865 GGTTTAGTCTAGCCTAGGTGTCTT 59.289 45.833 11.31 0.00 0.00 3.01
419 568 2.645802 AGTCTAGCCTAGGTGTCTTCG 58.354 52.381 11.31 0.00 0.00 3.79
421 570 2.355444 GTCTAGCCTAGGTGTCTTCGTC 59.645 54.545 11.31 0.00 0.00 4.20
422 571 1.331138 CTAGCCTAGGTGTCTTCGTCG 59.669 57.143 11.31 0.00 0.00 5.12
424 573 1.310933 GCCTAGGTGTCTTCGTCGGA 61.311 60.000 11.31 0.00 0.00 4.55
489 653 0.871722 CGAGCTCCAGATCTCGTAGG 59.128 60.000 8.47 0.00 44.95 3.18
508 672 4.966787 GGCGTGTCCCTGCCCAAA 62.967 66.667 0.00 0.00 45.73 3.28
509 673 2.909965 GCGTGTCCCTGCCCAAAA 60.910 61.111 0.00 0.00 0.00 2.44
510 674 2.919494 GCGTGTCCCTGCCCAAAAG 61.919 63.158 0.00 0.00 0.00 2.27
511 675 2.268076 CGTGTCCCTGCCCAAAAGG 61.268 63.158 0.00 0.00 39.47 3.11
574 739 3.001736 GCATCGAGTAGATTCAAGTTGCC 59.998 47.826 0.00 0.00 37.52 4.52
576 741 4.471904 TCGAGTAGATTCAAGTTGCCAT 57.528 40.909 0.00 0.00 0.00 4.40
588 753 1.615392 AGTTGCCATTTCTGCAGTTCC 59.385 47.619 14.67 0.00 40.35 3.62
622 787 5.182570 TCTCATTCATTCCTTGTTTGAGCAG 59.817 40.000 0.00 0.00 36.36 4.24
630 795 3.507233 TCCTTGTTTGAGCAGCCTTATTG 59.493 43.478 0.00 0.00 0.00 1.90
636 801 3.354948 TGAGCAGCCTTATTGTGACAT 57.645 42.857 0.00 0.00 0.00 3.06
652 817 5.321102 TGTGACATACCTGGTTGCTTATTT 58.679 37.500 3.84 0.00 0.00 1.40
672 837 5.431420 TTTGCTGTCACGAATTTACACAT 57.569 34.783 0.00 0.00 0.00 3.21
699 864 4.021368 TCTGACTTGTAAACCTCTACCTGC 60.021 45.833 0.00 0.00 0.00 4.85
712 877 4.551388 CTCTACCTGCGGATAGATTTGTC 58.449 47.826 0.00 0.00 0.00 3.18
743 908 3.170791 TCCTTGCTTGAGAAGATAGCG 57.829 47.619 0.00 0.00 37.73 4.26
746 911 0.528466 TGCTTGAGAAGATAGCGCCG 60.528 55.000 2.29 0.00 37.73 6.46
753 918 1.895280 GAAGATAGCGCCGCATCTGC 61.895 60.000 19.54 15.74 31.01 4.26
758 923 4.899239 GCGCCGCATCTGCCTAGT 62.899 66.667 3.15 0.00 37.91 2.57
762 927 1.156645 GCCGCATCTGCCTAGTCTTG 61.157 60.000 0.00 0.00 37.91 3.02
771 936 3.326588 TCTGCCTAGTCTTGCTTTGGTAA 59.673 43.478 0.00 0.00 0.00 2.85
772 937 4.019321 TCTGCCTAGTCTTGCTTTGGTAAT 60.019 41.667 0.00 0.00 0.00 1.89
773 938 4.261801 TGCCTAGTCTTGCTTTGGTAATC 58.738 43.478 0.00 0.00 0.00 1.75
774 939 3.628032 GCCTAGTCTTGCTTTGGTAATCC 59.372 47.826 0.00 0.00 0.00 3.01
775 940 4.626529 GCCTAGTCTTGCTTTGGTAATCCT 60.627 45.833 0.00 0.00 34.23 3.24
776 941 4.878397 CCTAGTCTTGCTTTGGTAATCCTG 59.122 45.833 0.00 0.00 34.23 3.86
777 942 4.373156 AGTCTTGCTTTGGTAATCCTGT 57.627 40.909 0.00 0.00 34.23 4.00
778 943 4.074970 AGTCTTGCTTTGGTAATCCTGTG 58.925 43.478 0.00 0.00 34.23 3.66
779 944 2.819608 TCTTGCTTTGGTAATCCTGTGC 59.180 45.455 0.00 0.00 34.23 4.57
780 945 1.544724 TGCTTTGGTAATCCTGTGCC 58.455 50.000 0.00 0.00 34.23 5.01
781 946 1.075374 TGCTTTGGTAATCCTGTGCCT 59.925 47.619 0.00 0.00 34.23 4.75
782 947 1.474077 GCTTTGGTAATCCTGTGCCTG 59.526 52.381 0.00 0.00 34.23 4.85
788 953 3.265737 TGGTAATCCTGTGCCTGTACATT 59.734 43.478 0.00 0.00 34.23 2.71
821 986 0.305922 GCGATTCGATCCTTGCTTGG 59.694 55.000 10.88 0.00 0.00 3.61
825 990 2.806945 TTCGATCCTTGCTTGGGAAT 57.193 45.000 0.00 0.00 36.37 3.01
979 1158 3.670377 GTTGGTGGTTCCTGGCGC 61.670 66.667 0.00 0.00 37.07 6.53
1176 1358 2.103042 GCACATCCACTCGCACTCC 61.103 63.158 0.00 0.00 0.00 3.85
1233 1415 1.038130 ACAAGCTCGTCCCGCTCTAT 61.038 55.000 0.00 0.00 36.56 1.98
1365 1547 2.203437 AACCACTTCCCCAACGCC 60.203 61.111 0.00 0.00 0.00 5.68
1542 1724 1.499368 GGTTTCCCTATGGGTACGGA 58.501 55.000 2.25 0.00 44.74 4.69
1551 1733 2.124860 GGGTACGGACATGGCCAC 60.125 66.667 20.22 9.21 0.00 5.01
1585 1767 3.286404 CATGCTTTCCATGGTGGGA 57.714 52.632 12.58 4.88 46.09 4.37
1674 1862 2.894387 GCGCTGCTCATCCTGGTC 60.894 66.667 0.00 0.00 0.00 4.02
1680 1868 1.522580 GCTCATCCTGGTCGGCTTC 60.523 63.158 0.00 0.00 0.00 3.86
1714 1902 4.851639 AGCCTCATCACATTCTAGGTTT 57.148 40.909 0.00 0.00 0.00 3.27
1720 1908 2.695359 TCACATTCTAGGTTTGTCGGC 58.305 47.619 0.00 0.00 0.00 5.54
1727 1915 0.834687 TAGGTTTGTCGGCTCCCACT 60.835 55.000 0.00 0.00 0.00 4.00
1802 1994 3.507233 AGATGTTGTGTGCATTACCTTGG 59.493 43.478 0.00 0.00 0.00 3.61
1827 2020 2.158755 CCCATACAAAGCCCTGGTCTAG 60.159 54.545 0.00 0.00 0.00 2.43
1925 2119 1.804326 GCGCCTGTGTACCGTAGTG 60.804 63.158 0.00 0.00 0.00 2.74
1968 2163 3.640967 TGATTTGGAAACCTCTGTTTGGG 59.359 43.478 0.00 0.00 44.57 4.12
2023 2219 6.577427 GTGTAATTTTGATTCGACTGTCCAAC 59.423 38.462 1.55 0.00 0.00 3.77
2037 2547 1.418637 GTCCAACTGAGTGGGGTGTAA 59.581 52.381 6.10 0.00 39.34 2.41
2047 2557 2.158385 AGTGGGGTGTAAGCATTTTCCA 60.158 45.455 0.00 0.00 34.77 3.53
2056 2566 6.460953 GGTGTAAGCATTTTCCAGTCTTGAAA 60.461 38.462 0.00 0.00 0.00 2.69
2057 2567 6.417930 GTGTAAGCATTTTCCAGTCTTGAAAC 59.582 38.462 0.00 0.00 31.78 2.78
2065 2605 3.206150 TCCAGTCTTGAAACTTGTGAGC 58.794 45.455 0.00 0.00 0.00 4.26
2083 2623 0.319813 GCCCATCACCTGTTTTGCAC 60.320 55.000 0.00 0.00 0.00 4.57
2093 2633 0.469705 TGTTTTGCACTGCCTGGGAT 60.470 50.000 0.00 0.00 0.00 3.85
2109 2649 5.672503 CCTGGGATGCTTGATAGATAGATG 58.327 45.833 0.00 0.00 0.00 2.90
2132 2672 2.661537 TGCTCGGCGTCACTTGTG 60.662 61.111 6.85 0.00 0.00 3.33
2148 2688 3.384467 ACTTGTGTGATGTTTTGGAAGGG 59.616 43.478 0.00 0.00 0.00 3.95
2153 2693 2.492088 GTGATGTTTTGGAAGGGTAGGC 59.508 50.000 0.00 0.00 0.00 3.93
2161 2701 1.709994 GGAAGGGTAGGCCATCTGGG 61.710 65.000 5.01 0.00 40.85 4.45
2162 2702 0.988678 GAAGGGTAGGCCATCTGGGT 60.989 60.000 5.01 0.00 39.65 4.51
2163 2703 0.345502 AAGGGTAGGCCATCTGGGTA 59.654 55.000 5.01 0.00 39.65 3.69
2164 2704 0.573279 AGGGTAGGCCATCTGGGTAT 59.427 55.000 5.01 0.00 39.65 2.73
2165 2705 0.693049 GGGTAGGCCATCTGGGTATG 59.307 60.000 5.01 0.00 39.65 2.39
2189 2729 0.032615 AGACCTCTGGAGTAGCCTGG 60.033 60.000 0.00 0.00 37.63 4.45
2190 2730 0.324830 GACCTCTGGAGTAGCCTGGT 60.325 60.000 0.00 0.00 37.86 4.00
2199 2739 0.618680 AGTAGCCTGGTCCAGCATCA 60.619 55.000 13.99 0.00 0.00 3.07
2209 2749 2.626840 GTCCAGCATCAGGAGAAACTC 58.373 52.381 0.00 0.00 35.42 3.01
2213 2753 3.055240 CCAGCATCAGGAGAAACTCTTCT 60.055 47.826 0.00 0.00 44.93 2.85
2235 3054 2.031870 GTTTTCAGCCAACAACCTCCT 58.968 47.619 0.00 0.00 0.00 3.69
2242 3061 2.026905 GCCAACAACCTCCTGGACAAA 61.027 52.381 0.00 0.00 37.04 2.83
2243 3062 2.597455 CCAACAACCTCCTGGACAAAT 58.403 47.619 0.00 0.00 37.04 2.32
2253 3072 4.584325 CCTCCTGGACAAATTTGAAGTTCA 59.416 41.667 24.64 0.08 34.57 3.18
2255 3074 4.036262 TCCTGGACAAATTTGAAGTTCACG 59.964 41.667 24.64 6.32 0.00 4.35
2256 3075 4.290155 CTGGACAAATTTGAAGTTCACGG 58.710 43.478 24.64 7.15 0.00 4.94
2257 3076 3.948473 TGGACAAATTTGAAGTTCACGGA 59.052 39.130 24.64 0.00 0.00 4.69
2258 3077 4.036262 TGGACAAATTTGAAGTTCACGGAG 59.964 41.667 24.64 0.00 0.00 4.63
2264 3083 1.079057 GAAGTTCACGGAGGGAGGC 60.079 63.158 0.00 0.00 0.00 4.70
2278 3097 1.718757 GGAGGCTATTGCGTGCTTGG 61.719 60.000 6.13 0.00 41.18 3.61
2288 3107 2.324330 CGTGCTTGGCCGTCATCAA 61.324 57.895 0.00 0.00 0.00 2.57
2289 3108 1.647545 CGTGCTTGGCCGTCATCAAT 61.648 55.000 0.00 0.00 0.00 2.57
2290 3109 1.378531 GTGCTTGGCCGTCATCAATA 58.621 50.000 0.00 0.00 0.00 1.90
2291 3110 1.742831 GTGCTTGGCCGTCATCAATAA 59.257 47.619 0.00 0.00 0.00 1.40
2292 3111 2.358898 GTGCTTGGCCGTCATCAATAAT 59.641 45.455 0.00 0.00 0.00 1.28
2293 3112 3.563808 GTGCTTGGCCGTCATCAATAATA 59.436 43.478 0.00 0.00 0.00 0.98
2294 3113 3.563808 TGCTTGGCCGTCATCAATAATAC 59.436 43.478 0.00 0.00 0.00 1.89
2295 3114 3.563808 GCTTGGCCGTCATCAATAATACA 59.436 43.478 0.00 0.00 0.00 2.29
2296 3115 4.319766 GCTTGGCCGTCATCAATAATACAG 60.320 45.833 0.00 0.00 0.00 2.74
2297 3116 4.681074 TGGCCGTCATCAATAATACAGA 57.319 40.909 0.00 0.00 0.00 3.41
2298 3117 5.029807 TGGCCGTCATCAATAATACAGAA 57.970 39.130 0.00 0.00 0.00 3.02
2301 3120 6.873605 TGGCCGTCATCAATAATACAGAATAG 59.126 38.462 0.00 0.00 0.00 1.73
2302 3121 6.183360 GGCCGTCATCAATAATACAGAATAGC 60.183 42.308 0.00 0.00 0.00 2.97
2304 3123 7.412346 GCCGTCATCAATAATACAGAATAGCAG 60.412 40.741 0.00 0.00 0.00 4.24
2305 3124 7.600375 CCGTCATCAATAATACAGAATAGCAGT 59.400 37.037 0.00 0.00 0.00 4.40
2313 3132 6.927294 AATACAGAATAGCAGTAAAGGTGC 57.073 37.500 0.00 0.00 41.54 5.01
2314 3133 3.610911 ACAGAATAGCAGTAAAGGTGCC 58.389 45.455 0.00 0.00 42.24 5.01
2315 3134 2.609459 CAGAATAGCAGTAAAGGTGCCG 59.391 50.000 0.00 0.00 42.24 5.69
2316 3135 1.940613 GAATAGCAGTAAAGGTGCCGG 59.059 52.381 0.00 0.00 42.24 6.13
2317 3136 0.909623 ATAGCAGTAAAGGTGCCGGT 59.090 50.000 1.90 0.00 42.24 5.28
2319 3138 0.688487 AGCAGTAAAGGTGCCGGTAA 59.312 50.000 1.90 0.00 42.24 2.85
2320 3139 0.800631 GCAGTAAAGGTGCCGGTAAC 59.199 55.000 0.00 0.00 34.67 2.50
2321 3140 1.609841 GCAGTAAAGGTGCCGGTAACT 60.610 52.381 3.36 3.36 34.67 2.24
2322 3141 2.774687 CAGTAAAGGTGCCGGTAACTT 58.225 47.619 18.03 18.03 0.00 2.66
2323 3142 3.143728 CAGTAAAGGTGCCGGTAACTTT 58.856 45.455 33.45 33.45 37.05 2.66
2324 3143 3.566742 CAGTAAAGGTGCCGGTAACTTTT 59.433 43.478 35.51 26.01 35.11 2.27
2325 3144 3.817084 AGTAAAGGTGCCGGTAACTTTTC 59.183 43.478 35.51 30.09 35.11 2.29
2326 3145 2.351706 AAGGTGCCGGTAACTTTTCA 57.648 45.000 18.03 0.00 0.00 2.69
2327 3146 2.579410 AGGTGCCGGTAACTTTTCAT 57.421 45.000 3.36 0.00 0.00 2.57
2328 3147 2.159382 AGGTGCCGGTAACTTTTCATG 58.841 47.619 3.36 0.00 0.00 3.07
2329 3148 1.201414 GGTGCCGGTAACTTTTCATGG 59.799 52.381 1.90 0.00 0.00 3.66
2330 3149 0.885196 TGCCGGTAACTTTTCATGGC 59.115 50.000 1.90 0.00 41.33 4.40
2331 3150 0.172578 GCCGGTAACTTTTCATGGCC 59.827 55.000 1.90 0.00 35.01 5.36
2332 3151 0.815095 CCGGTAACTTTTCATGGCCC 59.185 55.000 0.00 0.00 0.00 5.80
2333 3152 0.815095 CGGTAACTTTTCATGGCCCC 59.185 55.000 0.00 0.00 0.00 5.80
2334 3153 0.815095 GGTAACTTTTCATGGCCCCG 59.185 55.000 0.00 0.00 0.00 5.73
2335 3154 1.541379 GTAACTTTTCATGGCCCCGT 58.459 50.000 0.00 0.00 0.00 5.28
2336 3155 1.471287 GTAACTTTTCATGGCCCCGTC 59.529 52.381 0.00 0.00 0.00 4.79
2337 3156 0.112412 AACTTTTCATGGCCCCGTCT 59.888 50.000 0.00 0.00 0.00 4.18
2338 3157 0.609131 ACTTTTCATGGCCCCGTCTG 60.609 55.000 0.00 0.00 0.00 3.51
2339 3158 1.937546 CTTTTCATGGCCCCGTCTGC 61.938 60.000 0.00 0.00 0.00 4.26
2340 3159 2.424842 TTTTCATGGCCCCGTCTGCT 62.425 55.000 0.00 0.00 0.00 4.24
2341 3160 1.558167 TTTCATGGCCCCGTCTGCTA 61.558 55.000 0.00 0.00 0.00 3.49
2342 3161 1.971505 TTCATGGCCCCGTCTGCTAG 61.972 60.000 0.00 0.00 0.00 3.42
2343 3162 2.041922 ATGGCCCCGTCTGCTAGA 60.042 61.111 0.00 0.00 0.00 2.43
2344 3163 2.435693 ATGGCCCCGTCTGCTAGAC 61.436 63.158 0.00 6.31 41.71 2.59
2345 3164 3.851128 GGCCCCGTCTGCTAGACC 61.851 72.222 0.00 0.00 42.12 3.85
2346 3165 2.760385 GCCCCGTCTGCTAGACCT 60.760 66.667 9.71 0.00 42.12 3.85
2347 3166 3.082579 GCCCCGTCTGCTAGACCTG 62.083 68.421 9.71 3.41 42.12 4.00
2348 3167 2.496817 CCCGTCTGCTAGACCTGC 59.503 66.667 9.71 0.00 42.12 4.85
2349 3168 2.103143 CCGTCTGCTAGACCTGCG 59.897 66.667 9.71 0.00 42.12 5.18
2350 3169 2.407428 CCGTCTGCTAGACCTGCGA 61.407 63.158 9.71 0.00 42.12 5.10
2351 3170 1.226435 CGTCTGCTAGACCTGCGAC 60.226 63.158 9.71 0.00 42.12 5.19
2352 3171 1.649390 CGTCTGCTAGACCTGCGACT 61.649 60.000 9.71 0.00 42.12 4.18
2353 3172 0.179150 GTCTGCTAGACCTGCGACTG 60.179 60.000 0.00 0.00 39.28 3.51
2354 3173 1.140589 CTGCTAGACCTGCGACTGG 59.859 63.158 0.00 0.00 0.00 4.00
2355 3174 2.290122 CTGCTAGACCTGCGACTGGG 62.290 65.000 0.00 0.00 0.00 4.45
2356 3175 2.052690 GCTAGACCTGCGACTGGGA 61.053 63.158 0.00 0.00 0.00 4.37
2357 3176 1.395826 GCTAGACCTGCGACTGGGAT 61.396 60.000 0.00 0.00 0.00 3.85
2358 3177 0.387202 CTAGACCTGCGACTGGGATG 59.613 60.000 7.46 0.00 0.00 3.51
2359 3178 1.043116 TAGACCTGCGACTGGGATGG 61.043 60.000 7.46 0.00 0.00 3.51
2360 3179 2.607750 ACCTGCGACTGGGATGGT 60.608 61.111 7.46 0.00 0.00 3.55
2361 3180 2.185310 GACCTGCGACTGGGATGGTT 62.185 60.000 7.46 0.00 0.00 3.67
2374 3193 4.746466 TGGGATGGTTAAAAATGGAGTGT 58.254 39.130 0.00 0.00 0.00 3.55
2403 3222 4.202567 TGGCCTCCAACTCAAATCTTTACT 60.203 41.667 3.32 0.00 0.00 2.24
2407 3226 7.039993 GGCCTCCAACTCAAATCTTTACTTTTA 60.040 37.037 0.00 0.00 0.00 1.52
2408 3227 7.808381 GCCTCCAACTCAAATCTTTACTTTTAC 59.192 37.037 0.00 0.00 0.00 2.01
2409 3228 9.067986 CCTCCAACTCAAATCTTTACTTTTACT 57.932 33.333 0.00 0.00 0.00 2.24
2421 3240 9.833917 ATCTTTACTTTTACTAGTAGAATGCCC 57.166 33.333 3.59 0.00 32.54 5.36
2422 3241 7.977853 TCTTTACTTTTACTAGTAGAATGCCCG 59.022 37.037 3.59 0.00 32.54 6.13
2423 3242 5.672421 ACTTTTACTAGTAGAATGCCCGT 57.328 39.130 3.59 0.00 0.00 5.28
2424 3243 5.416947 ACTTTTACTAGTAGAATGCCCGTG 58.583 41.667 3.59 0.00 0.00 4.94
2425 3244 3.447918 TTACTAGTAGAATGCCCGTGC 57.552 47.619 3.59 0.00 38.26 5.34
2426 3245 0.102481 ACTAGTAGAATGCCCGTGCG 59.898 55.000 3.59 0.00 41.78 5.34
2427 3246 0.102481 CTAGTAGAATGCCCGTGCGT 59.898 55.000 0.00 0.00 41.78 5.24
2429 3248 1.019278 AGTAGAATGCCCGTGCGTTG 61.019 55.000 0.86 0.00 46.55 4.10
2430 3249 2.395360 TAGAATGCCCGTGCGTTGC 61.395 57.895 0.86 0.00 46.55 4.17
2431 3250 2.796483 TAGAATGCCCGTGCGTTGCT 62.796 55.000 0.86 2.45 46.55 3.91
2432 3251 2.359354 AATGCCCGTGCGTTGCTA 60.359 55.556 0.00 0.00 44.90 3.49
2433 3252 2.577763 GAATGCCCGTGCGTTGCTAC 62.578 60.000 0.86 0.00 46.55 3.58
2447 3266 3.226884 GCTACGGGCACAAGAGAAA 57.773 52.632 0.00 0.00 41.35 2.52
2448 3267 1.739067 GCTACGGGCACAAGAGAAAT 58.261 50.000 0.00 0.00 41.35 2.17
2449 3268 2.901249 GCTACGGGCACAAGAGAAATA 58.099 47.619 0.00 0.00 41.35 1.40
2450 3269 3.467803 GCTACGGGCACAAGAGAAATAT 58.532 45.455 0.00 0.00 41.35 1.28
2451 3270 4.628074 GCTACGGGCACAAGAGAAATATA 58.372 43.478 0.00 0.00 41.35 0.86
2452 3271 4.686554 GCTACGGGCACAAGAGAAATATAG 59.313 45.833 0.00 0.00 41.35 1.31
2453 3272 5.509163 GCTACGGGCACAAGAGAAATATAGA 60.509 44.000 0.00 0.00 41.35 1.98
2454 3273 5.552870 ACGGGCACAAGAGAAATATAGAT 57.447 39.130 0.00 0.00 0.00 1.98
2455 3274 5.300752 ACGGGCACAAGAGAAATATAGATG 58.699 41.667 0.00 0.00 0.00 2.90
2456 3275 5.070446 ACGGGCACAAGAGAAATATAGATGA 59.930 40.000 0.00 0.00 0.00 2.92
2457 3276 5.636965 CGGGCACAAGAGAAATATAGATGAG 59.363 44.000 0.00 0.00 0.00 2.90
2458 3277 6.529220 GGGCACAAGAGAAATATAGATGAGT 58.471 40.000 0.00 0.00 0.00 3.41
2459 3278 6.648725 GGGCACAAGAGAAATATAGATGAGTC 59.351 42.308 0.00 0.00 0.00 3.36
2460 3279 6.648725 GGCACAAGAGAAATATAGATGAGTCC 59.351 42.308 0.00 0.00 0.00 3.85
2461 3280 7.212976 GCACAAGAGAAATATAGATGAGTCCA 58.787 38.462 0.00 0.00 0.00 4.02
2462 3281 7.712639 GCACAAGAGAAATATAGATGAGTCCAA 59.287 37.037 0.00 0.00 0.00 3.53
2463 3282 9.258826 CACAAGAGAAATATAGATGAGTCCAAG 57.741 37.037 0.00 0.00 0.00 3.61
2464 3283 9.206690 ACAAGAGAAATATAGATGAGTCCAAGA 57.793 33.333 0.00 0.00 0.00 3.02
2465 3284 9.695526 CAAGAGAAATATAGATGAGTCCAAGAG 57.304 37.037 0.00 0.00 0.00 2.85
2466 3285 7.895759 AGAGAAATATAGATGAGTCCAAGAGC 58.104 38.462 0.00 0.00 0.00 4.09
2467 3286 7.508636 AGAGAAATATAGATGAGTCCAAGAGCA 59.491 37.037 0.00 0.00 0.00 4.26
2468 3287 8.204903 AGAAATATAGATGAGTCCAAGAGCAT 57.795 34.615 0.00 0.00 0.00 3.79
2469 3288 9.319060 AGAAATATAGATGAGTCCAAGAGCATA 57.681 33.333 0.00 0.00 0.00 3.14
2470 3289 9.935241 GAAATATAGATGAGTCCAAGAGCATAA 57.065 33.333 0.00 0.00 0.00 1.90
2471 3290 9.941325 AAATATAGATGAGTCCAAGAGCATAAG 57.059 33.333 0.00 0.00 0.00 1.73
2472 3291 6.992664 ATAGATGAGTCCAAGAGCATAAGT 57.007 37.500 0.00 0.00 0.00 2.24
2473 3292 5.690464 AGATGAGTCCAAGAGCATAAGTT 57.310 39.130 0.00 0.00 0.00 2.66
2474 3293 5.426504 AGATGAGTCCAAGAGCATAAGTTG 58.573 41.667 0.00 0.00 0.00 3.16
2475 3294 4.623932 TGAGTCCAAGAGCATAAGTTGT 57.376 40.909 0.00 0.00 0.00 3.32
2476 3295 4.318332 TGAGTCCAAGAGCATAAGTTGTG 58.682 43.478 0.00 0.00 0.00 3.33
2477 3296 3.679389 AGTCCAAGAGCATAAGTTGTGG 58.321 45.455 1.52 0.00 0.00 4.17
2478 3297 2.162408 GTCCAAGAGCATAAGTTGTGGC 59.838 50.000 1.52 0.00 0.00 5.01
2479 3298 1.474077 CCAAGAGCATAAGTTGTGGCC 59.526 52.381 0.00 0.00 0.00 5.36
2480 3299 2.161855 CAAGAGCATAAGTTGTGGCCA 58.838 47.619 0.00 0.00 0.00 5.36
2481 3300 2.756760 CAAGAGCATAAGTTGTGGCCAT 59.243 45.455 9.72 0.00 0.00 4.40
2482 3301 2.648059 AGAGCATAAGTTGTGGCCATC 58.352 47.619 9.72 3.12 0.00 3.51
2483 3302 2.240667 AGAGCATAAGTTGTGGCCATCT 59.759 45.455 9.72 5.38 0.00 2.90
2484 3303 3.019564 GAGCATAAGTTGTGGCCATCTT 58.980 45.455 9.72 16.39 35.38 2.40
2485 3304 3.434309 AGCATAAGTTGTGGCCATCTTT 58.566 40.909 9.72 4.26 33.66 2.52
2486 3305 3.834231 AGCATAAGTTGTGGCCATCTTTT 59.166 39.130 9.72 7.04 33.66 2.27
2487 3306 5.016173 AGCATAAGTTGTGGCCATCTTTTA 58.984 37.500 9.72 6.95 33.66 1.52
2488 3307 5.658190 AGCATAAGTTGTGGCCATCTTTTAT 59.342 36.000 9.72 9.06 33.66 1.40
2489 3308 5.979517 GCATAAGTTGTGGCCATCTTTTATC 59.020 40.000 9.72 0.00 33.66 1.75
2490 3309 6.183360 GCATAAGTTGTGGCCATCTTTTATCT 60.183 38.462 9.72 0.00 33.66 1.98
2491 3310 5.649782 AAGTTGTGGCCATCTTTTATCTG 57.350 39.130 9.72 0.00 28.38 2.90
2492 3311 3.445096 AGTTGTGGCCATCTTTTATCTGC 59.555 43.478 9.72 0.00 0.00 4.26
2493 3312 3.370840 TGTGGCCATCTTTTATCTGCT 57.629 42.857 9.72 0.00 0.00 4.24
2494 3313 3.282021 TGTGGCCATCTTTTATCTGCTC 58.718 45.455 9.72 0.00 0.00 4.26
2495 3314 2.620585 GTGGCCATCTTTTATCTGCTCC 59.379 50.000 9.72 0.00 0.00 4.70
2496 3315 2.241941 TGGCCATCTTTTATCTGCTCCA 59.758 45.455 0.00 0.00 0.00 3.86
2497 3316 2.620585 GGCCATCTTTTATCTGCTCCAC 59.379 50.000 0.00 0.00 0.00 4.02
2498 3317 2.289002 GCCATCTTTTATCTGCTCCACG 59.711 50.000 0.00 0.00 0.00 4.94
2499 3318 3.797039 CCATCTTTTATCTGCTCCACGA 58.203 45.455 0.00 0.00 0.00 4.35
2500 3319 4.191544 CCATCTTTTATCTGCTCCACGAA 58.808 43.478 0.00 0.00 0.00 3.85
2501 3320 4.272018 CCATCTTTTATCTGCTCCACGAAG 59.728 45.833 0.00 0.00 0.00 3.79
2502 3321 4.801330 TCTTTTATCTGCTCCACGAAGA 57.199 40.909 0.00 0.00 0.00 2.87
2503 3322 5.344743 TCTTTTATCTGCTCCACGAAGAT 57.655 39.130 0.00 0.00 34.99 2.40
2504 3323 5.111989 TCTTTTATCTGCTCCACGAAGATG 58.888 41.667 0.00 0.00 32.92 2.90
2505 3324 4.471904 TTTATCTGCTCCACGAAGATGT 57.528 40.909 0.00 0.00 32.92 3.06
2506 3325 4.471904 TTATCTGCTCCACGAAGATGTT 57.528 40.909 0.00 0.00 32.92 2.71
2507 3326 2.084610 TCTGCTCCACGAAGATGTTG 57.915 50.000 0.00 0.00 0.00 3.33
2508 3327 1.344438 TCTGCTCCACGAAGATGTTGT 59.656 47.619 0.00 0.00 0.00 3.32
2509 3328 1.728971 CTGCTCCACGAAGATGTTGTC 59.271 52.381 0.00 0.00 0.00 3.18
2510 3329 1.079503 GCTCCACGAAGATGTTGTCC 58.920 55.000 0.00 0.00 0.00 4.02
2511 3330 1.726853 CTCCACGAAGATGTTGTCCC 58.273 55.000 0.00 0.00 0.00 4.46
2512 3331 1.276421 CTCCACGAAGATGTTGTCCCT 59.724 52.381 0.00 0.00 0.00 4.20
2513 3332 1.275291 TCCACGAAGATGTTGTCCCTC 59.725 52.381 0.00 0.00 0.00 4.30
2514 3333 1.001974 CCACGAAGATGTTGTCCCTCA 59.998 52.381 0.00 0.00 0.00 3.86
2515 3334 2.549992 CCACGAAGATGTTGTCCCTCAA 60.550 50.000 0.00 0.00 0.00 3.02
2533 3352 9.930693 GTCCCTCAACTTTTCTACATATATAGG 57.069 37.037 0.00 0.00 0.00 2.57
2534 3353 9.670442 TCCCTCAACTTTTCTACATATATAGGT 57.330 33.333 5.26 5.26 0.00 3.08
2580 3399 6.653989 ACCAAGATTGTAGGAAGACATAAGG 58.346 40.000 0.00 0.00 0.00 2.69
2581 3400 6.215636 ACCAAGATTGTAGGAAGACATAAGGT 59.784 38.462 0.00 0.00 0.00 3.50
2582 3401 7.402071 ACCAAGATTGTAGGAAGACATAAGGTA 59.598 37.037 0.00 0.00 0.00 3.08
2583 3402 8.265055 CCAAGATTGTAGGAAGACATAAGGTAA 58.735 37.037 0.00 0.00 0.00 2.85
2584 3403 9.099454 CAAGATTGTAGGAAGACATAAGGTAAC 57.901 37.037 0.00 0.00 0.00 2.50
2585 3404 8.375493 AGATTGTAGGAAGACATAAGGTAACA 57.625 34.615 0.00 0.00 41.41 2.41
2586 3405 8.993424 AGATTGTAGGAAGACATAAGGTAACAT 58.007 33.333 0.00 0.00 41.41 2.71
2587 3406 9.614792 GATTGTAGGAAGACATAAGGTAACATT 57.385 33.333 0.00 0.00 41.41 2.71
2588 3407 9.975218 ATTGTAGGAAGACATAAGGTAACATTT 57.025 29.630 0.00 0.00 41.41 2.32
2589 3408 9.444600 TTGTAGGAAGACATAAGGTAACATTTC 57.555 33.333 0.00 0.00 41.41 2.17
2590 3409 8.598916 TGTAGGAAGACATAAGGTAACATTTCA 58.401 33.333 0.00 0.00 41.41 2.69
2591 3410 9.614792 GTAGGAAGACATAAGGTAACATTTCAT 57.385 33.333 0.00 0.00 41.41 2.57
2597 3416 9.698309 AGACATAAGGTAACATTTCATATCTCG 57.302 33.333 0.00 0.00 41.41 4.04
2598 3417 9.477484 GACATAAGGTAACATTTCATATCTCGT 57.523 33.333 0.00 0.00 41.41 4.18
2599 3418 9.832445 ACATAAGGTAACATTTCATATCTCGTT 57.168 29.630 0.00 0.00 41.41 3.85
2601 3420 7.787725 AAGGTAACATTTCATATCTCGTTCC 57.212 36.000 0.00 0.00 41.41 3.62
2602 3421 7.125792 AGGTAACATTTCATATCTCGTTCCT 57.874 36.000 0.00 0.00 41.41 3.36
2603 3422 7.565680 AGGTAACATTTCATATCTCGTTCCTT 58.434 34.615 0.00 0.00 41.41 3.36
2604 3423 8.047310 AGGTAACATTTCATATCTCGTTCCTTT 58.953 33.333 0.00 0.00 41.41 3.11
2605 3424 8.336080 GGTAACATTTCATATCTCGTTCCTTTC 58.664 37.037 0.00 0.00 0.00 2.62
2606 3425 6.927294 ACATTTCATATCTCGTTCCTTTCC 57.073 37.500 0.00 0.00 0.00 3.13
2607 3426 6.414732 ACATTTCATATCTCGTTCCTTTCCA 58.585 36.000 0.00 0.00 0.00 3.53
2608 3427 7.056635 ACATTTCATATCTCGTTCCTTTCCAT 58.943 34.615 0.00 0.00 0.00 3.41
2609 3428 7.557719 ACATTTCATATCTCGTTCCTTTCCATT 59.442 33.333 0.00 0.00 0.00 3.16
2610 3429 7.938140 TTTCATATCTCGTTCCTTTCCATTT 57.062 32.000 0.00 0.00 0.00 2.32
2611 3430 7.553881 TTCATATCTCGTTCCTTTCCATTTC 57.446 36.000 0.00 0.00 0.00 2.17
2612 3431 6.055588 TCATATCTCGTTCCTTTCCATTTCC 58.944 40.000 0.00 0.00 0.00 3.13
2613 3432 4.576330 ATCTCGTTCCTTTCCATTTCCT 57.424 40.909 0.00 0.00 0.00 3.36
2614 3433 3.939066 TCTCGTTCCTTTCCATTTCCTC 58.061 45.455 0.00 0.00 0.00 3.71
2615 3434 3.010420 CTCGTTCCTTTCCATTTCCTCC 58.990 50.000 0.00 0.00 0.00 4.30
2616 3435 2.642807 TCGTTCCTTTCCATTTCCTCCT 59.357 45.455 0.00 0.00 0.00 3.69
2617 3436 3.073946 TCGTTCCTTTCCATTTCCTCCTT 59.926 43.478 0.00 0.00 0.00 3.36
2618 3437 4.287585 TCGTTCCTTTCCATTTCCTCCTTA 59.712 41.667 0.00 0.00 0.00 2.69
2619 3438 5.007682 CGTTCCTTTCCATTTCCTCCTTAA 58.992 41.667 0.00 0.00 0.00 1.85
2620 3439 5.652452 CGTTCCTTTCCATTTCCTCCTTAAT 59.348 40.000 0.00 0.00 0.00 1.40
2621 3440 6.152831 CGTTCCTTTCCATTTCCTCCTTAATT 59.847 38.462 0.00 0.00 0.00 1.40
2622 3441 7.548097 GTTCCTTTCCATTTCCTCCTTAATTC 58.452 38.462 0.00 0.00 0.00 2.17
2623 3442 6.799827 TCCTTTCCATTTCCTCCTTAATTCA 58.200 36.000 0.00 0.00 0.00 2.57
2624 3443 6.663523 TCCTTTCCATTTCCTCCTTAATTCAC 59.336 38.462 0.00 0.00 0.00 3.18
2625 3444 6.127338 CCTTTCCATTTCCTCCTTAATTCACC 60.127 42.308 0.00 0.00 0.00 4.02
2626 3445 5.528600 TCCATTTCCTCCTTAATTCACCA 57.471 39.130 0.00 0.00 0.00 4.17
2627 3446 6.091076 TCCATTTCCTCCTTAATTCACCAT 57.909 37.500 0.00 0.00 0.00 3.55
2628 3447 6.129179 TCCATTTCCTCCTTAATTCACCATC 58.871 40.000 0.00 0.00 0.00 3.51
2629 3448 5.009010 CCATTTCCTCCTTAATTCACCATCG 59.991 44.000 0.00 0.00 0.00 3.84
2630 3449 5.429681 TTTCCTCCTTAATTCACCATCGA 57.570 39.130 0.00 0.00 0.00 3.59
2631 3450 5.429681 TTCCTCCTTAATTCACCATCGAA 57.570 39.130 0.00 0.00 0.00 3.71
2632 3451 5.429681 TCCTCCTTAATTCACCATCGAAA 57.570 39.130 0.00 0.00 0.00 3.46
2633 3452 5.183228 TCCTCCTTAATTCACCATCGAAAC 58.817 41.667 0.00 0.00 0.00 2.78
2634 3453 4.941263 CCTCCTTAATTCACCATCGAAACA 59.059 41.667 0.00 0.00 0.00 2.83
2635 3454 5.414454 CCTCCTTAATTCACCATCGAAACAA 59.586 40.000 0.00 0.00 0.00 2.83
2636 3455 6.403636 CCTCCTTAATTCACCATCGAAACAAG 60.404 42.308 0.00 0.00 0.00 3.16
2637 3456 6.234920 TCCTTAATTCACCATCGAAACAAGA 58.765 36.000 0.00 0.00 0.00 3.02
2638 3457 6.148811 TCCTTAATTCACCATCGAAACAAGAC 59.851 38.462 0.00 0.00 0.00 3.01
2639 3458 4.404507 AATTCACCATCGAAACAAGACG 57.595 40.909 0.00 0.00 0.00 4.18
2640 3459 2.519377 TCACCATCGAAACAAGACGT 57.481 45.000 0.00 0.00 0.00 4.34
2641 3460 2.131972 TCACCATCGAAACAAGACGTG 58.868 47.619 0.00 0.00 0.00 4.49
2642 3461 2.131972 CACCATCGAAACAAGACGTGA 58.868 47.619 0.00 0.00 0.00 4.35
2643 3462 2.096909 CACCATCGAAACAAGACGTGAC 60.097 50.000 0.00 0.00 0.00 3.67
2644 3463 2.131972 CCATCGAAACAAGACGTGACA 58.868 47.619 0.00 0.00 0.00 3.58
2645 3464 2.736721 CCATCGAAACAAGACGTGACAT 59.263 45.455 0.00 0.00 0.00 3.06
2646 3465 3.181530 CCATCGAAACAAGACGTGACATC 60.182 47.826 0.00 0.00 0.00 3.06
2647 3466 3.086818 TCGAAACAAGACGTGACATCA 57.913 42.857 0.00 0.00 0.00 3.07
2648 3467 3.649073 TCGAAACAAGACGTGACATCAT 58.351 40.909 0.00 0.00 0.00 2.45
2649 3468 3.428534 TCGAAACAAGACGTGACATCATG 59.571 43.478 0.00 0.00 38.76 3.07
2651 3470 4.318760 CGAAACAAGACGTGACATCATGTT 60.319 41.667 8.12 0.00 45.32 2.71
2652 3471 4.732285 AACAAGACGTGACATCATGTTC 57.268 40.909 8.12 2.76 45.32 3.18
2653 3472 3.727726 ACAAGACGTGACATCATGTTCA 58.272 40.909 8.12 0.00 45.32 3.18
2654 3473 4.318332 ACAAGACGTGACATCATGTTCAT 58.682 39.130 8.12 0.00 45.32 2.57
2655 3474 4.756642 ACAAGACGTGACATCATGTTCATT 59.243 37.500 8.12 2.31 45.32 2.57
2656 3475 5.106948 ACAAGACGTGACATCATGTTCATTC 60.107 40.000 8.12 0.00 45.32 2.67
2657 3476 4.825422 AGACGTGACATCATGTTCATTCT 58.175 39.130 8.12 0.00 45.32 2.40
2658 3477 4.867047 AGACGTGACATCATGTTCATTCTC 59.133 41.667 8.12 0.00 45.32 2.87
2659 3478 3.935203 ACGTGACATCATGTTCATTCTCC 59.065 43.478 0.71 0.00 43.01 3.71
2660 3479 3.310774 CGTGACATCATGTTCATTCTCCC 59.689 47.826 0.00 0.00 0.00 4.30
2661 3480 4.264253 GTGACATCATGTTCATTCTCCCA 58.736 43.478 0.00 0.00 0.00 4.37
2662 3481 4.095483 GTGACATCATGTTCATTCTCCCAC 59.905 45.833 0.00 0.00 0.00 4.61
2663 3482 4.263418 TGACATCATGTTCATTCTCCCACA 60.263 41.667 0.00 0.00 0.00 4.17
2664 3483 4.665451 ACATCATGTTCATTCTCCCACAA 58.335 39.130 0.00 0.00 0.00 3.33
2665 3484 5.078949 ACATCATGTTCATTCTCCCACAAA 58.921 37.500 0.00 0.00 0.00 2.83
2666 3485 5.539574 ACATCATGTTCATTCTCCCACAAAA 59.460 36.000 0.00 0.00 0.00 2.44
2667 3486 6.041865 ACATCATGTTCATTCTCCCACAAAAA 59.958 34.615 0.00 0.00 0.00 1.94
2699 3518 5.904362 AAATGTTCATTCTCCCTAGTTGC 57.096 39.130 0.00 0.00 0.00 4.17
2700 3519 3.350219 TGTTCATTCTCCCTAGTTGCC 57.650 47.619 0.00 0.00 0.00 4.52
2701 3520 2.912956 TGTTCATTCTCCCTAGTTGCCT 59.087 45.455 0.00 0.00 0.00 4.75
2702 3521 3.055094 TGTTCATTCTCCCTAGTTGCCTC 60.055 47.826 0.00 0.00 0.00 4.70
2703 3522 2.119495 TCATTCTCCCTAGTTGCCTCC 58.881 52.381 0.00 0.00 0.00 4.30
2704 3523 2.122768 CATTCTCCCTAGTTGCCTCCT 58.877 52.381 0.00 0.00 0.00 3.69
2705 3524 3.052109 TCATTCTCCCTAGTTGCCTCCTA 60.052 47.826 0.00 0.00 0.00 2.94
2706 3525 3.708236 TTCTCCCTAGTTGCCTCCTAT 57.292 47.619 0.00 0.00 0.00 2.57
2707 3526 3.708236 TCTCCCTAGTTGCCTCCTATT 57.292 47.619 0.00 0.00 0.00 1.73
2708 3527 4.008916 TCTCCCTAGTTGCCTCCTATTT 57.991 45.455 0.00 0.00 0.00 1.40
2709 3528 4.371681 TCTCCCTAGTTGCCTCCTATTTT 58.628 43.478 0.00 0.00 0.00 1.82
2710 3529 4.409247 TCTCCCTAGTTGCCTCCTATTTTC 59.591 45.833 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.866910 TCGCGAGGCTTTATTAATTCGTT 59.133 39.130 3.71 0.00 0.00 3.85
1 2 3.244579 GTCGCGAGGCTTTATTAATTCGT 59.755 43.478 10.24 0.00 0.00 3.85
3 4 3.244579 ACGTCGCGAGGCTTTATTAATTC 59.755 43.478 27.18 1.02 0.00 2.17
4 5 3.192466 ACGTCGCGAGGCTTTATTAATT 58.808 40.909 27.18 2.09 0.00 1.40
5 6 2.817901 ACGTCGCGAGGCTTTATTAAT 58.182 42.857 27.18 2.85 0.00 1.40
6 7 2.282701 ACGTCGCGAGGCTTTATTAA 57.717 45.000 27.18 0.00 0.00 1.40
7 8 1.921887 CAACGTCGCGAGGCTTTATTA 59.078 47.619 27.18 0.00 0.00 0.98
8 9 0.719465 CAACGTCGCGAGGCTTTATT 59.281 50.000 27.18 11.79 0.00 1.40
9 10 1.693083 GCAACGTCGCGAGGCTTTAT 61.693 55.000 27.18 5.88 0.00 1.40
10 11 2.377310 GCAACGTCGCGAGGCTTTA 61.377 57.895 27.18 0.00 0.00 1.85
11 12 3.712881 GCAACGTCGCGAGGCTTT 61.713 61.111 27.18 13.23 0.00 3.51
14 15 4.789075 TAGGCAACGTCGCGAGGC 62.789 66.667 27.18 19.01 46.39 4.70
15 16 1.286354 TTTTAGGCAACGTCGCGAGG 61.286 55.000 25.84 25.84 46.39 4.63
16 17 0.509499 TTTTTAGGCAACGTCGCGAG 59.491 50.000 10.24 6.53 46.39 5.03
17 18 2.602738 TTTTTAGGCAACGTCGCGA 58.397 47.368 3.71 3.71 46.39 5.87
33 34 5.279106 GGTCAAGCCGGGTTAATTAGTTTTT 60.279 40.000 20.28 0.00 0.00 1.94
34 35 4.219070 GGTCAAGCCGGGTTAATTAGTTTT 59.781 41.667 20.28 0.00 0.00 2.43
35 36 3.760151 GGTCAAGCCGGGTTAATTAGTTT 59.240 43.478 20.28 0.00 0.00 2.66
36 37 3.244981 TGGTCAAGCCGGGTTAATTAGTT 60.245 43.478 20.28 0.00 41.21 2.24
121 156 1.432023 GGGGAACAAGTGGGGAGGAA 61.432 60.000 0.00 0.00 0.00 3.36
124 159 1.774894 TTCGGGGAACAAGTGGGGAG 61.775 60.000 0.00 0.00 0.00 4.30
146 186 2.014033 GAGAGGGGAGGGGACGAGAT 62.014 65.000 0.00 0.00 0.00 2.75
155 195 0.467290 CGAGAGAAGGAGAGGGGAGG 60.467 65.000 0.00 0.00 0.00 4.30
160 200 1.813192 GGTGCGAGAGAAGGAGAGG 59.187 63.158 0.00 0.00 0.00 3.69
164 204 3.760035 GGCGGTGCGAGAGAAGGA 61.760 66.667 0.00 0.00 0.00 3.36
219 273 1.218316 GAGGGTGGGACTGCTTACG 59.782 63.158 0.00 0.00 0.00 3.18
369 445 2.669569 GCAGCGGCACAGGAAAGA 60.670 61.111 3.18 0.00 40.72 2.52
417 566 3.429141 GAGCACCGACTCCGACGA 61.429 66.667 0.00 0.00 38.22 4.20
507 671 0.103009 ACCCTCCCCTTTACCCCTTT 60.103 55.000 0.00 0.00 0.00 3.11
508 672 0.103009 AACCCTCCCCTTTACCCCTT 60.103 55.000 0.00 0.00 0.00 3.95
509 673 0.849540 CAACCCTCCCCTTTACCCCT 60.850 60.000 0.00 0.00 0.00 4.79
510 674 1.695465 CAACCCTCCCCTTTACCCC 59.305 63.158 0.00 0.00 0.00 4.95
511 675 1.695465 CCAACCCTCCCCTTTACCC 59.305 63.158 0.00 0.00 0.00 3.69
512 676 1.695465 CCCAACCCTCCCCTTTACC 59.305 63.158 0.00 0.00 0.00 2.85
513 677 0.847758 TCCCCAACCCTCCCCTTTAC 60.848 60.000 0.00 0.00 0.00 2.01
514 678 0.124522 ATCCCCAACCCTCCCCTTTA 59.875 55.000 0.00 0.00 0.00 1.85
574 739 2.349886 GACTAGCGGAACTGCAGAAATG 59.650 50.000 23.35 8.54 37.31 2.32
576 741 1.668919 CGACTAGCGGAACTGCAGAAA 60.669 52.381 23.35 0.00 37.31 2.52
622 787 3.886123 ACCAGGTATGTCACAATAAGGC 58.114 45.455 0.00 0.00 0.00 4.35
630 795 5.640732 CAAATAAGCAACCAGGTATGTCAC 58.359 41.667 0.00 0.00 0.00 3.67
636 801 3.756434 GACAGCAAATAAGCAACCAGGTA 59.244 43.478 0.00 0.00 36.85 3.08
652 817 6.546972 TTTATGTGTAAATTCGTGACAGCA 57.453 33.333 0.00 0.00 0.00 4.41
672 837 8.311836 CAGGTAGAGGTTTACAAGTCAGATTTA 58.688 37.037 0.00 0.00 0.00 1.40
699 864 4.202357 TGGAATCCCTGACAAATCTATCCG 60.202 45.833 0.00 0.00 0.00 4.18
725 890 1.596727 GGCGCTATCTTCTCAAGCAAG 59.403 52.381 7.64 0.00 35.98 4.01
732 897 0.038709 AGATGCGGCGCTATCTTCTC 60.039 55.000 33.26 16.25 29.64 2.87
734 899 1.895280 GCAGATGCGGCGCTATCTTC 61.895 60.000 30.37 25.32 31.53 2.87
743 908 1.144936 AAGACTAGGCAGATGCGGC 59.855 57.895 0.00 0.00 43.26 6.53
746 911 2.035530 AAGCAAGACTAGGCAGATGC 57.964 50.000 11.81 11.81 41.14 3.91
753 918 4.878397 CAGGATTACCAAAGCAAGACTAGG 59.122 45.833 0.00 0.00 38.94 3.02
758 923 2.819608 GCACAGGATTACCAAAGCAAGA 59.180 45.455 0.00 0.00 38.94 3.02
762 927 1.474077 CAGGCACAGGATTACCAAAGC 59.526 52.381 0.00 0.00 38.94 3.51
771 936 3.939740 ATCAATGTACAGGCACAGGAT 57.060 42.857 0.33 0.00 0.00 3.24
772 937 4.030216 TCTATCAATGTACAGGCACAGGA 58.970 43.478 0.33 0.00 0.00 3.86
773 938 4.406648 TCTATCAATGTACAGGCACAGG 57.593 45.455 0.33 0.00 0.00 4.00
774 939 6.317140 ACAAATCTATCAATGTACAGGCACAG 59.683 38.462 0.33 0.00 0.00 3.66
775 940 6.179756 ACAAATCTATCAATGTACAGGCACA 58.820 36.000 0.33 0.00 0.00 4.57
776 941 6.316140 TGACAAATCTATCAATGTACAGGCAC 59.684 38.462 0.33 0.00 0.00 5.01
777 942 6.413892 TGACAAATCTATCAATGTACAGGCA 58.586 36.000 0.33 0.00 0.00 4.75
778 943 6.512415 GCTGACAAATCTATCAATGTACAGGC 60.512 42.308 0.33 0.00 0.00 4.85
779 944 6.292542 CGCTGACAAATCTATCAATGTACAGG 60.293 42.308 0.33 0.00 0.00 4.00
780 945 6.476706 TCGCTGACAAATCTATCAATGTACAG 59.523 38.462 0.33 0.00 0.00 2.74
781 946 6.337356 TCGCTGACAAATCTATCAATGTACA 58.663 36.000 0.00 0.00 0.00 2.90
782 947 6.828502 TCGCTGACAAATCTATCAATGTAC 57.171 37.500 0.00 0.00 0.00 2.90
788 953 4.932146 TCGAATCGCTGACAAATCTATCA 58.068 39.130 0.00 0.00 0.00 2.15
821 986 2.746362 GCCAGATGTGCAGCTATATTCC 59.254 50.000 0.00 0.00 0.00 3.01
825 990 3.234353 ACTAGCCAGATGTGCAGCTATA 58.766 45.455 3.83 0.00 37.22 1.31
876 1041 4.858692 CAGCTTGTAAAATTGCAGCGTATT 59.141 37.500 0.00 0.00 0.00 1.89
1365 1547 0.774908 TGAACCAGGGGTTAGGGTTG 59.225 55.000 0.00 0.00 46.95 3.77
1674 1862 2.956964 GCGATCACGAGGAAGCCG 60.957 66.667 0.00 0.00 42.66 5.52
1680 1868 1.880340 GAGGCTTGCGATCACGAGG 60.880 63.158 0.20 0.00 42.66 4.63
1714 1902 0.535335 GACAATAGTGGGAGCCGACA 59.465 55.000 4.49 0.00 0.00 4.35
1720 1908 4.396166 GGTGACAAATGACAATAGTGGGAG 59.604 45.833 0.00 0.00 0.00 4.30
1727 1915 7.857734 ATTATGACGGTGACAAATGACAATA 57.142 32.000 0.00 0.00 0.00 1.90
1777 1968 3.753272 AGGTAATGCACACAACATCTGAC 59.247 43.478 0.00 0.00 0.00 3.51
1820 2013 2.103373 GCACCACTCAGATCTAGACCA 58.897 52.381 0.00 0.00 0.00 4.02
1827 2020 2.143122 TCAAAACGCACCACTCAGATC 58.857 47.619 0.00 0.00 0.00 2.75
1908 2101 1.153901 CCACTACGGTACACAGGCG 60.154 63.158 0.00 0.00 0.00 5.52
1945 2139 4.501400 CCCAAACAGAGGTTTCCAAATCAC 60.501 45.833 0.00 0.00 45.18 3.06
1968 2163 3.366052 AATTGGTCTGGTACATCCACC 57.634 47.619 0.00 0.00 40.62 4.61
2023 2219 2.496899 AATGCTTACACCCCACTCAG 57.503 50.000 0.00 0.00 0.00 3.35
2037 2547 5.127682 ACAAGTTTCAAGACTGGAAAATGCT 59.872 36.000 6.59 0.00 36.14 3.79
2047 2557 2.092429 TGGGCTCACAAGTTTCAAGACT 60.092 45.455 0.00 0.00 0.00 3.24
2065 2605 1.000060 CAGTGCAAAACAGGTGATGGG 60.000 52.381 0.00 0.00 0.00 4.00
2083 2623 1.419012 TCTATCAAGCATCCCAGGCAG 59.581 52.381 0.00 0.00 0.00 4.85
2093 2633 3.906218 AGGCCACATCTATCTATCAAGCA 59.094 43.478 5.01 0.00 0.00 3.91
2127 2667 3.384467 ACCCTTCCAAAACATCACACAAG 59.616 43.478 0.00 0.00 0.00 3.16
2132 2672 2.492088 GCCTACCCTTCCAAAACATCAC 59.508 50.000 0.00 0.00 0.00 3.06
2148 2688 1.072331 CCACATACCCAGATGGCCTAC 59.928 57.143 3.32 0.00 37.83 3.18
2153 2693 1.417890 GTCTCCCACATACCCAGATGG 59.582 57.143 0.00 0.00 41.37 3.51
2161 2701 2.035632 CTCCAGAGGTCTCCCACATAC 58.964 57.143 0.00 0.00 0.00 2.39
2162 2702 1.646447 ACTCCAGAGGTCTCCCACATA 59.354 52.381 0.00 0.00 0.00 2.29
2163 2703 0.415429 ACTCCAGAGGTCTCCCACAT 59.585 55.000 0.00 0.00 0.00 3.21
2164 2704 1.006043 CTACTCCAGAGGTCTCCCACA 59.994 57.143 0.00 0.00 0.00 4.17
2165 2705 1.770294 CTACTCCAGAGGTCTCCCAC 58.230 60.000 0.00 0.00 0.00 4.61
2183 2723 2.677289 CCTGATGCTGGACCAGGCT 61.677 63.158 23.09 5.78 40.69 4.58
2184 2724 2.124403 CCTGATGCTGGACCAGGC 60.124 66.667 23.09 15.07 40.69 4.85
2185 2725 0.979709 TCTCCTGATGCTGGACCAGG 60.980 60.000 23.09 2.56 46.64 4.45
2189 2729 2.235898 AGAGTTTCTCCTGATGCTGGAC 59.764 50.000 0.00 0.00 0.00 4.02
2190 2730 2.544721 AGAGTTTCTCCTGATGCTGGA 58.455 47.619 0.00 0.00 0.00 3.86
2199 2739 5.298026 GCTGAAAACAAGAAGAGTTTCTCCT 59.702 40.000 0.00 0.00 42.80 3.69
2209 2749 3.865164 GGTTGTTGGCTGAAAACAAGAAG 59.135 43.478 8.11 0.00 45.49 2.85
2213 2753 2.167487 GGAGGTTGTTGGCTGAAAACAA 59.833 45.455 4.75 4.75 43.39 2.83
2235 3054 3.948473 TCCGTGAACTTCAAATTTGTCCA 59.052 39.130 17.47 7.20 0.00 4.02
2242 3061 2.290323 CCTCCCTCCGTGAACTTCAAAT 60.290 50.000 0.00 0.00 0.00 2.32
2243 3062 1.071699 CCTCCCTCCGTGAACTTCAAA 59.928 52.381 0.00 0.00 0.00 2.69
2253 3072 2.797278 CGCAATAGCCTCCCTCCGT 61.797 63.158 0.00 0.00 37.52 4.69
2255 3074 1.227674 CACGCAATAGCCTCCCTCC 60.228 63.158 0.00 0.00 37.52 4.30
2256 3075 1.889573 GCACGCAATAGCCTCCCTC 60.890 63.158 0.00 0.00 37.52 4.30
2257 3076 1.915078 AAGCACGCAATAGCCTCCCT 61.915 55.000 0.00 0.00 37.52 4.20
2258 3077 1.452108 AAGCACGCAATAGCCTCCC 60.452 57.895 0.00 0.00 37.52 4.30
2264 3083 2.309764 GACGGCCAAGCACGCAATAG 62.310 60.000 2.24 0.00 0.00 1.73
2278 3097 6.368791 TGCTATTCTGTATTATTGATGACGGC 59.631 38.462 0.00 0.00 0.00 5.68
2288 3107 7.661847 GGCACCTTTACTGCTATTCTGTATTAT 59.338 37.037 0.00 0.00 34.84 1.28
2289 3108 6.990349 GGCACCTTTACTGCTATTCTGTATTA 59.010 38.462 0.00 0.00 34.84 0.98
2290 3109 5.823045 GGCACCTTTACTGCTATTCTGTATT 59.177 40.000 0.00 0.00 34.84 1.89
2291 3110 5.368989 GGCACCTTTACTGCTATTCTGTAT 58.631 41.667 0.00 0.00 34.84 2.29
2292 3111 4.679639 CGGCACCTTTACTGCTATTCTGTA 60.680 45.833 0.00 0.00 34.84 2.74
2293 3112 3.610911 GGCACCTTTACTGCTATTCTGT 58.389 45.455 0.00 0.00 34.84 3.41
2294 3113 2.609459 CGGCACCTTTACTGCTATTCTG 59.391 50.000 0.00 0.00 34.84 3.02
2295 3114 2.420129 CCGGCACCTTTACTGCTATTCT 60.420 50.000 0.00 0.00 34.84 2.40
2296 3115 1.940613 CCGGCACCTTTACTGCTATTC 59.059 52.381 0.00 0.00 34.84 1.75
2297 3116 1.280998 ACCGGCACCTTTACTGCTATT 59.719 47.619 0.00 0.00 34.84 1.73
2298 3117 0.909623 ACCGGCACCTTTACTGCTAT 59.090 50.000 0.00 0.00 34.84 2.97
2301 3120 0.800631 GTTACCGGCACCTTTACTGC 59.199 55.000 0.00 0.00 0.00 4.40
2302 3121 2.467566 AGTTACCGGCACCTTTACTG 57.532 50.000 0.00 0.00 0.00 2.74
2304 3123 3.565063 TGAAAAGTTACCGGCACCTTTAC 59.435 43.478 0.00 0.00 0.00 2.01
2305 3124 3.818180 TGAAAAGTTACCGGCACCTTTA 58.182 40.909 0.00 0.00 0.00 1.85
2307 3126 2.351706 TGAAAAGTTACCGGCACCTT 57.648 45.000 0.00 0.00 0.00 3.50
2308 3127 2.159382 CATGAAAAGTTACCGGCACCT 58.841 47.619 0.00 0.00 0.00 4.00
2309 3128 1.201414 CCATGAAAAGTTACCGGCACC 59.799 52.381 0.00 0.00 0.00 5.01
2310 3129 1.402325 GCCATGAAAAGTTACCGGCAC 60.402 52.381 0.00 0.00 37.98 5.01
2311 3130 0.885196 GCCATGAAAAGTTACCGGCA 59.115 50.000 0.00 0.00 37.98 5.69
2312 3131 0.172578 GGCCATGAAAAGTTACCGGC 59.827 55.000 0.00 0.00 37.33 6.13
2313 3132 0.815095 GGGCCATGAAAAGTTACCGG 59.185 55.000 4.39 0.00 0.00 5.28
2314 3133 0.815095 GGGGCCATGAAAAGTTACCG 59.185 55.000 4.39 0.00 0.00 4.02
2315 3134 0.815095 CGGGGCCATGAAAAGTTACC 59.185 55.000 4.39 0.00 0.00 2.85
2316 3135 1.471287 GACGGGGCCATGAAAAGTTAC 59.529 52.381 4.39 0.00 0.00 2.50
2317 3136 1.353022 AGACGGGGCCATGAAAAGTTA 59.647 47.619 4.39 0.00 0.00 2.24
2319 3138 0.609131 CAGACGGGGCCATGAAAAGT 60.609 55.000 4.39 0.00 0.00 2.66
2320 3139 1.937546 GCAGACGGGGCCATGAAAAG 61.938 60.000 4.39 0.00 0.00 2.27
2321 3140 1.976474 GCAGACGGGGCCATGAAAA 60.976 57.895 4.39 0.00 0.00 2.29
2322 3141 1.558167 TAGCAGACGGGGCCATGAAA 61.558 55.000 4.39 0.00 0.00 2.69
2323 3142 1.971505 CTAGCAGACGGGGCCATGAA 61.972 60.000 4.39 0.00 0.00 2.57
2324 3143 2.364973 TAGCAGACGGGGCCATGA 60.365 61.111 4.39 0.00 0.00 3.07
2325 3144 2.109799 CTAGCAGACGGGGCCATG 59.890 66.667 4.39 0.00 0.00 3.66
2326 3145 2.041922 TCTAGCAGACGGGGCCAT 60.042 61.111 4.39 0.00 0.00 4.40
2327 3146 3.075005 GTCTAGCAGACGGGGCCA 61.075 66.667 4.39 0.00 35.28 5.36
2328 3147 3.851128 GGTCTAGCAGACGGGGCC 61.851 72.222 0.00 0.00 45.96 5.80
2329 3148 2.760385 AGGTCTAGCAGACGGGGC 60.760 66.667 9.29 0.00 45.96 5.80
2330 3149 3.082579 GCAGGTCTAGCAGACGGGG 62.083 68.421 9.29 4.24 45.96 5.73
2331 3150 2.496817 GCAGGTCTAGCAGACGGG 59.503 66.667 9.29 6.08 45.96 5.28
2332 3151 2.103143 CGCAGGTCTAGCAGACGG 59.897 66.667 9.29 6.34 45.96 4.79
2333 3152 1.226435 GTCGCAGGTCTAGCAGACG 60.226 63.158 9.29 0.00 45.96 4.18
2334 3153 0.179150 CAGTCGCAGGTCTAGCAGAC 60.179 60.000 7.52 7.52 44.32 3.51
2335 3154 1.315981 CCAGTCGCAGGTCTAGCAGA 61.316 60.000 0.00 0.00 0.00 4.26
2336 3155 1.140589 CCAGTCGCAGGTCTAGCAG 59.859 63.158 0.00 0.00 0.00 4.24
2337 3156 2.351244 CCCAGTCGCAGGTCTAGCA 61.351 63.158 0.00 0.00 0.00 3.49
2338 3157 1.395826 ATCCCAGTCGCAGGTCTAGC 61.396 60.000 0.00 0.00 0.00 3.42
2339 3158 0.387202 CATCCCAGTCGCAGGTCTAG 59.613 60.000 0.00 0.00 0.00 2.43
2340 3159 1.043116 CCATCCCAGTCGCAGGTCTA 61.043 60.000 0.00 0.00 0.00 2.59
2341 3160 2.362369 CCATCCCAGTCGCAGGTCT 61.362 63.158 0.00 0.00 0.00 3.85
2342 3161 2.185310 AACCATCCCAGTCGCAGGTC 62.185 60.000 0.00 0.00 0.00 3.85
2343 3162 0.907704 TAACCATCCCAGTCGCAGGT 60.908 55.000 0.00 0.00 0.00 4.00
2344 3163 0.251916 TTAACCATCCCAGTCGCAGG 59.748 55.000 0.00 0.00 0.00 4.85
2345 3164 2.107950 TTTAACCATCCCAGTCGCAG 57.892 50.000 0.00 0.00 0.00 5.18
2346 3165 2.570415 TTTTAACCATCCCAGTCGCA 57.430 45.000 0.00 0.00 0.00 5.10
2347 3166 3.428862 CCATTTTTAACCATCCCAGTCGC 60.429 47.826 0.00 0.00 0.00 5.19
2348 3167 4.013728 TCCATTTTTAACCATCCCAGTCG 58.986 43.478 0.00 0.00 0.00 4.18
2349 3168 5.016831 ACTCCATTTTTAACCATCCCAGTC 58.983 41.667 0.00 0.00 0.00 3.51
2350 3169 4.772100 CACTCCATTTTTAACCATCCCAGT 59.228 41.667 0.00 0.00 0.00 4.00
2351 3170 4.772100 ACACTCCATTTTTAACCATCCCAG 59.228 41.667 0.00 0.00 0.00 4.45
2352 3171 4.746466 ACACTCCATTTTTAACCATCCCA 58.254 39.130 0.00 0.00 0.00 4.37
2353 3172 5.163693 CGTACACTCCATTTTTAACCATCCC 60.164 44.000 0.00 0.00 0.00 3.85
2354 3173 5.163693 CCGTACACTCCATTTTTAACCATCC 60.164 44.000 0.00 0.00 0.00 3.51
2355 3174 5.644636 TCCGTACACTCCATTTTTAACCATC 59.355 40.000 0.00 0.00 0.00 3.51
2356 3175 5.562635 TCCGTACACTCCATTTTTAACCAT 58.437 37.500 0.00 0.00 0.00 3.55
2357 3176 4.970711 TCCGTACACTCCATTTTTAACCA 58.029 39.130 0.00 0.00 0.00 3.67
2358 3177 5.163693 CCATCCGTACACTCCATTTTTAACC 60.164 44.000 0.00 0.00 0.00 2.85
2359 3178 5.675323 GCCATCCGTACACTCCATTTTTAAC 60.675 44.000 0.00 0.00 0.00 2.01
2360 3179 4.396790 GCCATCCGTACACTCCATTTTTAA 59.603 41.667 0.00 0.00 0.00 1.52
2361 3180 3.942748 GCCATCCGTACACTCCATTTTTA 59.057 43.478 0.00 0.00 0.00 1.52
2403 3222 4.186159 GCACGGGCATTCTACTAGTAAAA 58.814 43.478 3.77 0.00 40.72 1.52
2407 3226 0.102481 CGCACGGGCATTCTACTAGT 59.898 55.000 11.77 0.00 41.24 2.57
2408 3227 0.102481 ACGCACGGGCATTCTACTAG 59.898 55.000 11.77 0.00 41.24 2.57
2409 3228 0.533491 AACGCACGGGCATTCTACTA 59.467 50.000 11.77 0.00 41.24 1.82
2410 3229 1.019278 CAACGCACGGGCATTCTACT 61.019 55.000 11.77 0.00 41.24 2.57
2411 3230 1.423845 CAACGCACGGGCATTCTAC 59.576 57.895 11.77 0.00 41.24 2.59
2412 3231 2.395360 GCAACGCACGGGCATTCTA 61.395 57.895 11.77 0.00 41.24 2.10
2413 3232 2.796483 TAGCAACGCACGGGCATTCT 62.796 55.000 11.77 2.86 41.24 2.40
2414 3233 2.395360 TAGCAACGCACGGGCATTC 61.395 57.895 11.77 0.00 41.24 2.67
2415 3234 2.359354 TAGCAACGCACGGGCATT 60.359 55.556 11.77 0.00 41.24 3.56
2416 3235 3.124921 GTAGCAACGCACGGGCAT 61.125 61.111 11.77 0.00 41.24 4.40
2429 3248 1.739067 ATTTCTCTTGTGCCCGTAGC 58.261 50.000 0.00 0.00 44.14 3.58
2430 3249 6.085555 TCTATATTTCTCTTGTGCCCGTAG 57.914 41.667 0.00 0.00 0.00 3.51
2431 3250 6.266786 TCATCTATATTTCTCTTGTGCCCGTA 59.733 38.462 0.00 0.00 0.00 4.02
2432 3251 5.070446 TCATCTATATTTCTCTTGTGCCCGT 59.930 40.000 0.00 0.00 0.00 5.28
2433 3252 5.541845 TCATCTATATTTCTCTTGTGCCCG 58.458 41.667 0.00 0.00 0.00 6.13
2434 3253 6.529220 ACTCATCTATATTTCTCTTGTGCCC 58.471 40.000 0.00 0.00 0.00 5.36
2435 3254 6.648725 GGACTCATCTATATTTCTCTTGTGCC 59.351 42.308 0.00 0.00 0.00 5.01
2436 3255 7.212976 TGGACTCATCTATATTTCTCTTGTGC 58.787 38.462 0.00 0.00 0.00 4.57
2437 3256 9.258826 CTTGGACTCATCTATATTTCTCTTGTG 57.741 37.037 0.00 0.00 0.00 3.33
2438 3257 9.206690 TCTTGGACTCATCTATATTTCTCTTGT 57.793 33.333 0.00 0.00 0.00 3.16
2439 3258 9.695526 CTCTTGGACTCATCTATATTTCTCTTG 57.304 37.037 0.00 0.00 0.00 3.02
2440 3259 8.367156 GCTCTTGGACTCATCTATATTTCTCTT 58.633 37.037 0.00 0.00 0.00 2.85
2441 3260 7.508636 TGCTCTTGGACTCATCTATATTTCTCT 59.491 37.037 0.00 0.00 0.00 3.10
2442 3261 7.665690 TGCTCTTGGACTCATCTATATTTCTC 58.334 38.462 0.00 0.00 0.00 2.87
2443 3262 7.609097 TGCTCTTGGACTCATCTATATTTCT 57.391 36.000 0.00 0.00 0.00 2.52
2444 3263 9.935241 TTATGCTCTTGGACTCATCTATATTTC 57.065 33.333 0.00 0.00 0.00 2.17
2445 3264 9.941325 CTTATGCTCTTGGACTCATCTATATTT 57.059 33.333 0.00 0.00 0.00 1.40
2446 3265 9.099071 ACTTATGCTCTTGGACTCATCTATATT 57.901 33.333 0.00 0.00 0.00 1.28
2447 3266 8.663209 ACTTATGCTCTTGGACTCATCTATAT 57.337 34.615 0.00 0.00 0.00 0.86
2448 3267 8.363390 CAACTTATGCTCTTGGACTCATCTATA 58.637 37.037 0.00 0.00 0.00 1.31
2449 3268 6.992664 ACTTATGCTCTTGGACTCATCTAT 57.007 37.500 0.00 0.00 0.00 1.98
2450 3269 6.155221 ACAACTTATGCTCTTGGACTCATCTA 59.845 38.462 0.00 0.00 0.00 1.98
2451 3270 5.046014 ACAACTTATGCTCTTGGACTCATCT 60.046 40.000 0.00 0.00 0.00 2.90
2452 3271 5.064452 CACAACTTATGCTCTTGGACTCATC 59.936 44.000 0.00 0.00 0.00 2.92
2453 3272 4.940046 CACAACTTATGCTCTTGGACTCAT 59.060 41.667 0.00 0.00 0.00 2.90
2454 3273 4.318332 CACAACTTATGCTCTTGGACTCA 58.682 43.478 0.00 0.00 0.00 3.41
2455 3274 3.686726 CCACAACTTATGCTCTTGGACTC 59.313 47.826 0.00 0.00 0.00 3.36
2456 3275 3.679389 CCACAACTTATGCTCTTGGACT 58.321 45.455 0.00 0.00 0.00 3.85
2457 3276 2.162408 GCCACAACTTATGCTCTTGGAC 59.838 50.000 0.00 0.00 0.00 4.02
2458 3277 2.436417 GCCACAACTTATGCTCTTGGA 58.564 47.619 0.00 0.00 0.00 3.53
2459 3278 1.474077 GGCCACAACTTATGCTCTTGG 59.526 52.381 0.00 0.00 0.00 3.61
2460 3279 2.161855 TGGCCACAACTTATGCTCTTG 58.838 47.619 0.00 0.00 0.00 3.02
2461 3280 2.584835 TGGCCACAACTTATGCTCTT 57.415 45.000 0.00 0.00 0.00 2.85
2462 3281 2.240667 AGATGGCCACAACTTATGCTCT 59.759 45.455 8.16 0.00 0.00 4.09
2463 3282 2.648059 AGATGGCCACAACTTATGCTC 58.352 47.619 8.16 0.00 0.00 4.26
2464 3283 2.814805 AGATGGCCACAACTTATGCT 57.185 45.000 8.16 0.00 0.00 3.79
2465 3284 3.874392 AAAGATGGCCACAACTTATGC 57.126 42.857 8.16 0.00 38.58 3.14
2466 3285 7.198390 CAGATAAAAGATGGCCACAACTTATG 58.802 38.462 8.16 5.89 38.58 1.90
2467 3286 6.183360 GCAGATAAAAGATGGCCACAACTTAT 60.183 38.462 8.16 9.63 38.58 1.73
2468 3287 5.125417 GCAGATAAAAGATGGCCACAACTTA 59.875 40.000 8.16 4.48 38.58 2.24
2469 3288 4.082026 GCAGATAAAAGATGGCCACAACTT 60.082 41.667 8.16 11.85 40.90 2.66
2470 3289 3.445096 GCAGATAAAAGATGGCCACAACT 59.555 43.478 8.16 5.17 0.00 3.16
2471 3290 3.445096 AGCAGATAAAAGATGGCCACAAC 59.555 43.478 8.16 2.33 0.00 3.32
2472 3291 3.696051 GAGCAGATAAAAGATGGCCACAA 59.304 43.478 8.16 0.00 0.00 3.33
2473 3292 3.282021 GAGCAGATAAAAGATGGCCACA 58.718 45.455 8.16 0.00 0.00 4.17
2474 3293 2.620585 GGAGCAGATAAAAGATGGCCAC 59.379 50.000 8.16 1.58 0.00 5.01
2475 3294 2.241941 TGGAGCAGATAAAAGATGGCCA 59.758 45.455 8.56 8.56 0.00 5.36
2476 3295 2.620585 GTGGAGCAGATAAAAGATGGCC 59.379 50.000 0.00 0.00 0.00 5.36
2477 3296 2.289002 CGTGGAGCAGATAAAAGATGGC 59.711 50.000 0.00 0.00 0.00 4.40
2478 3297 3.797039 TCGTGGAGCAGATAAAAGATGG 58.203 45.455 0.00 0.00 0.00 3.51
2479 3298 5.111989 TCTTCGTGGAGCAGATAAAAGATG 58.888 41.667 0.00 0.00 0.00 2.90
2480 3299 5.344743 TCTTCGTGGAGCAGATAAAAGAT 57.655 39.130 0.00 0.00 0.00 2.40
2481 3300 4.801330 TCTTCGTGGAGCAGATAAAAGA 57.199 40.909 0.00 0.00 0.00 2.52
2482 3301 4.872691 ACATCTTCGTGGAGCAGATAAAAG 59.127 41.667 0.00 0.00 31.08 2.27
2483 3302 4.832248 ACATCTTCGTGGAGCAGATAAAA 58.168 39.130 0.00 0.00 31.08 1.52
2484 3303 4.471904 ACATCTTCGTGGAGCAGATAAA 57.528 40.909 0.00 0.00 31.08 1.40
2485 3304 4.183865 CAACATCTTCGTGGAGCAGATAA 58.816 43.478 0.00 0.00 31.08 1.75
2486 3305 3.195610 ACAACATCTTCGTGGAGCAGATA 59.804 43.478 0.00 0.00 31.08 1.98
2487 3306 2.027745 ACAACATCTTCGTGGAGCAGAT 60.028 45.455 0.00 0.00 33.07 2.90
2488 3307 1.344438 ACAACATCTTCGTGGAGCAGA 59.656 47.619 0.00 0.00 0.00 4.26
2489 3308 1.728971 GACAACATCTTCGTGGAGCAG 59.271 52.381 0.00 0.00 0.00 4.24
2490 3309 1.608025 GGACAACATCTTCGTGGAGCA 60.608 52.381 0.00 0.00 0.00 4.26
2491 3310 1.079503 GGACAACATCTTCGTGGAGC 58.920 55.000 0.00 0.00 0.00 4.70
2492 3311 1.276421 AGGGACAACATCTTCGTGGAG 59.724 52.381 0.00 0.00 0.00 3.86
2493 3312 1.275291 GAGGGACAACATCTTCGTGGA 59.725 52.381 0.00 0.00 0.00 4.02
2494 3313 1.001974 TGAGGGACAACATCTTCGTGG 59.998 52.381 0.00 0.00 0.00 4.94
2495 3314 2.455674 TGAGGGACAACATCTTCGTG 57.544 50.000 0.00 0.00 0.00 4.35
2507 3326 9.930693 CCTATATATGTAGAAAAGTTGAGGGAC 57.069 37.037 8.00 0.00 0.00 4.46
2508 3327 9.670442 ACCTATATATGTAGAAAAGTTGAGGGA 57.330 33.333 8.00 0.00 0.00 4.20
2554 3373 8.432805 CCTTATGTCTTCCTACAATCTTGGTAT 58.567 37.037 0.00 0.00 32.02 2.73
2555 3374 7.402071 ACCTTATGTCTTCCTACAATCTTGGTA 59.598 37.037 0.00 0.00 32.02 3.25
2556 3375 6.215636 ACCTTATGTCTTCCTACAATCTTGGT 59.784 38.462 0.00 0.00 32.02 3.67
2557 3376 6.653989 ACCTTATGTCTTCCTACAATCTTGG 58.346 40.000 0.00 0.00 32.02 3.61
2558 3377 9.099454 GTTACCTTATGTCTTCCTACAATCTTG 57.901 37.037 0.00 0.00 32.02 3.02
2559 3378 8.822805 TGTTACCTTATGTCTTCCTACAATCTT 58.177 33.333 0.00 0.00 32.02 2.40
2560 3379 8.375493 TGTTACCTTATGTCTTCCTACAATCT 57.625 34.615 0.00 0.00 32.02 2.40
2561 3380 9.614792 AATGTTACCTTATGTCTTCCTACAATC 57.385 33.333 0.00 0.00 32.02 2.67
2562 3381 9.975218 AAATGTTACCTTATGTCTTCCTACAAT 57.025 29.630 0.00 0.00 32.02 2.71
2563 3382 9.444600 GAAATGTTACCTTATGTCTTCCTACAA 57.555 33.333 0.00 0.00 32.02 2.41
2564 3383 8.598916 TGAAATGTTACCTTATGTCTTCCTACA 58.401 33.333 0.00 0.00 0.00 2.74
2565 3384 9.614792 ATGAAATGTTACCTTATGTCTTCCTAC 57.385 33.333 0.00 0.00 0.00 3.18
2571 3390 9.698309 CGAGATATGAAATGTTACCTTATGTCT 57.302 33.333 0.00 0.00 0.00 3.41
2572 3391 9.477484 ACGAGATATGAAATGTTACCTTATGTC 57.523 33.333 0.00 0.00 0.00 3.06
2573 3392 9.832445 AACGAGATATGAAATGTTACCTTATGT 57.168 29.630 0.00 0.00 0.00 2.29
2575 3394 9.490379 GGAACGAGATATGAAATGTTACCTTAT 57.510 33.333 0.00 0.00 0.00 1.73
2576 3395 8.701895 AGGAACGAGATATGAAATGTTACCTTA 58.298 33.333 0.00 0.00 0.00 2.69
2577 3396 7.565680 AGGAACGAGATATGAAATGTTACCTT 58.434 34.615 0.00 0.00 0.00 3.50
2578 3397 7.125792 AGGAACGAGATATGAAATGTTACCT 57.874 36.000 0.00 0.00 0.00 3.08
2579 3398 7.787725 AAGGAACGAGATATGAAATGTTACC 57.212 36.000 0.00 0.00 0.00 2.85
2580 3399 8.336080 GGAAAGGAACGAGATATGAAATGTTAC 58.664 37.037 0.00 0.00 0.00 2.50
2581 3400 8.044309 TGGAAAGGAACGAGATATGAAATGTTA 58.956 33.333 0.00 0.00 0.00 2.41
2582 3401 6.884295 TGGAAAGGAACGAGATATGAAATGTT 59.116 34.615 0.00 0.00 0.00 2.71
2583 3402 6.414732 TGGAAAGGAACGAGATATGAAATGT 58.585 36.000 0.00 0.00 0.00 2.71
2584 3403 6.925610 TGGAAAGGAACGAGATATGAAATG 57.074 37.500 0.00 0.00 0.00 2.32
2585 3404 8.525290 AAATGGAAAGGAACGAGATATGAAAT 57.475 30.769 0.00 0.00 0.00 2.17
2586 3405 7.067008 GGAAATGGAAAGGAACGAGATATGAAA 59.933 37.037 0.00 0.00 0.00 2.69
2587 3406 6.542370 GGAAATGGAAAGGAACGAGATATGAA 59.458 38.462 0.00 0.00 0.00 2.57
2588 3407 6.055588 GGAAATGGAAAGGAACGAGATATGA 58.944 40.000 0.00 0.00 0.00 2.15
2589 3408 6.058183 AGGAAATGGAAAGGAACGAGATATG 58.942 40.000 0.00 0.00 0.00 1.78
2590 3409 6.253946 AGGAAATGGAAAGGAACGAGATAT 57.746 37.500 0.00 0.00 0.00 1.63
2591 3410 5.396436 GGAGGAAATGGAAAGGAACGAGATA 60.396 44.000 0.00 0.00 0.00 1.98
2592 3411 4.518249 GAGGAAATGGAAAGGAACGAGAT 58.482 43.478 0.00 0.00 0.00 2.75
2593 3412 3.307480 GGAGGAAATGGAAAGGAACGAGA 60.307 47.826 0.00 0.00 0.00 4.04
2594 3413 3.010420 GGAGGAAATGGAAAGGAACGAG 58.990 50.000 0.00 0.00 0.00 4.18
2595 3414 2.642807 AGGAGGAAATGGAAAGGAACGA 59.357 45.455 0.00 0.00 0.00 3.85
2596 3415 3.073274 AGGAGGAAATGGAAAGGAACG 57.927 47.619 0.00 0.00 0.00 3.95
2597 3416 7.178451 TGAATTAAGGAGGAAATGGAAAGGAAC 59.822 37.037 0.00 0.00 0.00 3.62
2598 3417 7.178451 GTGAATTAAGGAGGAAATGGAAAGGAA 59.822 37.037 0.00 0.00 0.00 3.36
2599 3418 6.663523 GTGAATTAAGGAGGAAATGGAAAGGA 59.336 38.462 0.00 0.00 0.00 3.36
2600 3419 6.127338 GGTGAATTAAGGAGGAAATGGAAAGG 60.127 42.308 0.00 0.00 0.00 3.11
2601 3420 6.437162 TGGTGAATTAAGGAGGAAATGGAAAG 59.563 38.462 0.00 0.00 0.00 2.62
2602 3421 6.318913 TGGTGAATTAAGGAGGAAATGGAAA 58.681 36.000 0.00 0.00 0.00 3.13
2603 3422 5.898120 TGGTGAATTAAGGAGGAAATGGAA 58.102 37.500 0.00 0.00 0.00 3.53
2604 3423 5.528600 TGGTGAATTAAGGAGGAAATGGA 57.471 39.130 0.00 0.00 0.00 3.41
2605 3424 5.009010 CGATGGTGAATTAAGGAGGAAATGG 59.991 44.000 0.00 0.00 0.00 3.16
2606 3425 5.822519 TCGATGGTGAATTAAGGAGGAAATG 59.177 40.000 0.00 0.00 0.00 2.32
2607 3426 6.001449 TCGATGGTGAATTAAGGAGGAAAT 57.999 37.500 0.00 0.00 0.00 2.17
2608 3427 5.429681 TCGATGGTGAATTAAGGAGGAAA 57.570 39.130 0.00 0.00 0.00 3.13
2609 3428 5.429681 TTCGATGGTGAATTAAGGAGGAA 57.570 39.130 0.00 0.00 0.00 3.36
2610 3429 5.183228 GTTTCGATGGTGAATTAAGGAGGA 58.817 41.667 0.00 0.00 0.00 3.71
2611 3430 4.941263 TGTTTCGATGGTGAATTAAGGAGG 59.059 41.667 0.00 0.00 0.00 4.30
2612 3431 6.371548 TCTTGTTTCGATGGTGAATTAAGGAG 59.628 38.462 0.00 0.00 0.00 3.69
2613 3432 6.148811 GTCTTGTTTCGATGGTGAATTAAGGA 59.851 38.462 0.00 0.00 0.00 3.36
2614 3433 6.314784 GTCTTGTTTCGATGGTGAATTAAGG 58.685 40.000 0.00 0.00 0.00 2.69
2615 3434 6.015504 CGTCTTGTTTCGATGGTGAATTAAG 58.984 40.000 0.00 0.00 0.00 1.85
2616 3435 5.467399 ACGTCTTGTTTCGATGGTGAATTAA 59.533 36.000 0.00 0.00 0.00 1.40
2617 3436 4.992319 ACGTCTTGTTTCGATGGTGAATTA 59.008 37.500 0.00 0.00 0.00 1.40
2618 3437 3.813166 ACGTCTTGTTTCGATGGTGAATT 59.187 39.130 0.00 0.00 0.00 2.17
2619 3438 3.186409 CACGTCTTGTTTCGATGGTGAAT 59.814 43.478 0.00 0.00 0.00 2.57
2620 3439 2.542178 CACGTCTTGTTTCGATGGTGAA 59.458 45.455 0.00 0.00 0.00 3.18
2621 3440 2.131972 CACGTCTTGTTTCGATGGTGA 58.868 47.619 0.00 0.00 0.00 4.02
2622 3441 2.096909 GTCACGTCTTGTTTCGATGGTG 60.097 50.000 0.00 0.00 0.00 4.17
2623 3442 2.132762 GTCACGTCTTGTTTCGATGGT 58.867 47.619 0.00 0.00 0.00 3.55
2624 3443 2.131972 TGTCACGTCTTGTTTCGATGG 58.868 47.619 0.00 0.00 0.00 3.51
2625 3444 3.428534 TGATGTCACGTCTTGTTTCGATG 59.571 43.478 0.00 0.00 0.00 3.84
2626 3445 3.649073 TGATGTCACGTCTTGTTTCGAT 58.351 40.909 0.00 0.00 0.00 3.59
2627 3446 3.086818 TGATGTCACGTCTTGTTTCGA 57.913 42.857 0.00 0.00 0.00 3.71
2628 3447 3.184379 ACATGATGTCACGTCTTGTTTCG 59.816 43.478 11.82 0.00 32.13 3.46
2629 3448 4.732285 ACATGATGTCACGTCTTGTTTC 57.268 40.909 11.82 0.00 32.13 2.78
2630 3449 4.574421 TGAACATGATGTCACGTCTTGTTT 59.426 37.500 24.64 13.40 41.29 2.83
2631 3450 4.126437 TGAACATGATGTCACGTCTTGTT 58.874 39.130 24.29 24.29 42.83 2.83
2632 3451 3.727726 TGAACATGATGTCACGTCTTGT 58.272 40.909 11.82 11.82 36.05 3.16
2633 3452 4.934075 ATGAACATGATGTCACGTCTTG 57.066 40.909 10.63 10.63 0.00 3.02
2634 3453 5.240891 AGAATGAACATGATGTCACGTCTT 58.759 37.500 0.00 0.00 0.00 3.01
2635 3454 4.825422 AGAATGAACATGATGTCACGTCT 58.175 39.130 0.00 3.55 0.00 4.18
2636 3455 4.033358 GGAGAATGAACATGATGTCACGTC 59.967 45.833 0.00 0.00 0.00 4.34
2637 3456 3.935203 GGAGAATGAACATGATGTCACGT 59.065 43.478 0.00 0.00 0.00 4.49
2638 3457 3.310774 GGGAGAATGAACATGATGTCACG 59.689 47.826 0.00 0.00 0.00 4.35
2639 3458 4.095483 GTGGGAGAATGAACATGATGTCAC 59.905 45.833 0.00 0.00 0.00 3.67
2640 3459 4.263418 TGTGGGAGAATGAACATGATGTCA 60.263 41.667 0.00 0.00 0.00 3.58
2641 3460 4.264253 TGTGGGAGAATGAACATGATGTC 58.736 43.478 0.00 0.00 0.00 3.06
2642 3461 4.305539 TGTGGGAGAATGAACATGATGT 57.694 40.909 0.00 0.00 0.00 3.06
2643 3462 5.648178 TTTGTGGGAGAATGAACATGATG 57.352 39.130 0.00 0.00 0.00 3.07
2644 3463 6.669125 TTTTTGTGGGAGAATGAACATGAT 57.331 33.333 0.00 0.00 0.00 2.45
2675 3494 6.295292 GGCAACTAGGGAGAATGAACATTTTT 60.295 38.462 1.56 0.00 0.00 1.94
2676 3495 5.185828 GGCAACTAGGGAGAATGAACATTTT 59.814 40.000 1.56 0.00 0.00 1.82
2677 3496 4.706962 GGCAACTAGGGAGAATGAACATTT 59.293 41.667 1.56 0.00 0.00 2.32
2678 3497 4.273318 GGCAACTAGGGAGAATGAACATT 58.727 43.478 0.00 0.00 0.00 2.71
2679 3498 3.891049 GGCAACTAGGGAGAATGAACAT 58.109 45.455 0.00 0.00 0.00 2.71
2680 3499 3.350219 GGCAACTAGGGAGAATGAACA 57.650 47.619 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.