Multiple sequence alignment - TraesCS5A01G007100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G007100 chr5A 100.000 2606 0 0 1 2606 4079763 4082368 0.000000e+00 4813.0
1 TraesCS5A01G007100 chr5A 93.333 75 4 1 341 415 536881210 536881283 2.740000e-20 110.0
2 TraesCS5A01G007100 chr4A 94.171 1750 50 14 904 2606 17887788 17889532 0.000000e+00 2619.0
3 TraesCS5A01G007100 chr4A 95.102 490 24 0 415 904 617673887 617674376 0.000000e+00 773.0
4 TraesCS5A01G007100 chr4A 95.702 349 7 3 1 349 17886059 17886399 2.930000e-154 555.0
5 TraesCS5A01G007100 chr4A 95.833 72 2 1 344 415 734291090 734291020 5.890000e-22 115.0
6 TraesCS5A01G007100 chr7D 95.510 490 22 0 415 904 567651681 567652170 0.000000e+00 784.0
7 TraesCS5A01G007100 chr7D 89.176 619 62 3 988 1604 376941113 376941728 0.000000e+00 767.0
8 TraesCS5A01G007100 chr7D 95.161 62 2 1 291 351 635697241 635697180 2.130000e-16 97.1
9 TraesCS5A01G007100 chr5D 94.898 490 25 0 415 904 128585802 128586291 0.000000e+00 767.0
10 TraesCS5A01G007100 chr5D 94.286 490 26 1 415 904 390979312 390979799 0.000000e+00 749.0
11 TraesCS5A01G007100 chr3D 94.908 491 24 1 415 904 583586390 583585900 0.000000e+00 767.0
12 TraesCS5A01G007100 chr3D 80.899 623 99 14 995 1614 332327019 332326414 8.440000e-130 473.0
13 TraesCS5A01G007100 chr7A 94.501 491 25 2 415 904 14668245 14667756 0.000000e+00 756.0
14 TraesCS5A01G007100 chr7A 88.264 622 72 1 984 1604 424534678 424535299 0.000000e+00 743.0
15 TraesCS5A01G007100 chr6A 94.082 490 28 1 415 904 77787302 77787790 0.000000e+00 743.0
16 TraesCS5A01G007100 chr6A 87.629 194 20 3 149 339 428597388 428597196 3.380000e-54 222.0
17 TraesCS5A01G007100 chr6A 87.629 194 20 3 149 339 428611543 428611351 3.380000e-54 222.0
18 TraesCS5A01G007100 chr6A 96.970 66 2 0 350 415 20711180 20711245 7.620000e-21 111.0
19 TraesCS5A01G007100 chr6A 94.286 70 4 0 346 415 6392972 6393041 9.860000e-20 108.0
20 TraesCS5A01G007100 chr6A 94.203 69 4 0 347 415 58033638 58033706 3.550000e-19 106.0
21 TraesCS5A01G007100 chr1A 94.082 490 28 1 415 904 482775877 482776365 0.000000e+00 743.0
22 TraesCS5A01G007100 chr1A 86.822 129 17 0 211 339 466029337 466029209 7.520000e-31 145.0
23 TraesCS5A01G007100 chr7B 88.331 617 72 0 988 1604 372008137 372008753 0.000000e+00 741.0
24 TraesCS5A01G007100 chr7B 92.000 75 4 2 340 413 41358292 41358365 1.280000e-18 104.0
25 TraesCS5A01G007100 chr1D 93.878 490 30 0 415 904 108827344 108827833 0.000000e+00 739.0
26 TraesCS5A01G007100 chr2A 87.418 612 73 2 995 1604 764913449 764914058 0.000000e+00 701.0
27 TraesCS5A01G007100 chr2A 95.714 70 3 0 346 415 542559198 542559129 2.120000e-21 113.0
28 TraesCS5A01G007100 chr2A 96.970 66 2 0 350 415 58171199 58171264 7.620000e-21 111.0
29 TraesCS5A01G007100 chr2B 87.034 617 80 0 988 1604 798294659 798295275 0.000000e+00 697.0
30 TraesCS5A01G007100 chr2B 87.625 598 74 0 1007 1604 798702764 798702167 0.000000e+00 695.0
31 TraesCS5A01G007100 chr5B 95.028 362 13 3 904 1261 6869307 6869667 4.870000e-157 564.0
32 TraesCS5A01G007100 chr4B 95.640 344 13 1 1 342 314425086 314424743 3.790000e-153 551.0
33 TraesCS5A01G007100 chr6D 94.395 339 16 2 1 336 137126000 137126338 3.840000e-143 518.0
34 TraesCS5A01G007100 chr3A 80.096 623 104 17 995 1614 449656933 449656328 1.840000e-121 446.0
35 TraesCS5A01G007100 chrUn 96.970 66 2 0 350 415 304097649 304097584 7.620000e-21 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G007100 chr5A 4079763 4082368 2605 False 4813 4813 100.0000 1 2606 1 chr5A.!!$F1 2605
1 TraesCS5A01G007100 chr4A 17886059 17889532 3473 False 1587 2619 94.9365 1 2606 2 chr4A.!!$F2 2605
2 TraesCS5A01G007100 chr7D 376941113 376941728 615 False 767 767 89.1760 988 1604 1 chr7D.!!$F1 616
3 TraesCS5A01G007100 chr3D 332326414 332327019 605 True 473 473 80.8990 995 1614 1 chr3D.!!$R1 619
4 TraesCS5A01G007100 chr7A 424534678 424535299 621 False 743 743 88.2640 984 1604 1 chr7A.!!$F1 620
5 TraesCS5A01G007100 chr7B 372008137 372008753 616 False 741 741 88.3310 988 1604 1 chr7B.!!$F2 616
6 TraesCS5A01G007100 chr2A 764913449 764914058 609 False 701 701 87.4180 995 1604 1 chr2A.!!$F2 609
7 TraesCS5A01G007100 chr2B 798294659 798295275 616 False 697 697 87.0340 988 1604 1 chr2B.!!$F1 616
8 TraesCS5A01G007100 chr2B 798702167 798702764 597 True 695 695 87.6250 1007 1604 1 chr2B.!!$R1 597
9 TraesCS5A01G007100 chr3A 449656328 449656933 605 True 446 446 80.0960 995 1614 1 chr3A.!!$R1 619

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
388 389 0.037975 CGTGTAGGCGTTACCCAACT 60.038 55.0 0.0 0.0 40.58 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1769 2723 0.250467 CATAAGGGAGTCGCCATGGG 60.25 60.0 15.13 3.69 38.95 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
157 158 2.203126 GCGGCCTGAGAGGAATGG 60.203 66.667 0.00 0.00 37.67 3.16
185 186 1.367840 GGAATAGAGATGCGGCGGT 59.632 57.895 9.78 0.00 0.00 5.68
209 210 3.877508 GGATTCGTTCGGGATGAGAATTT 59.122 43.478 0.00 0.00 32.42 1.82
279 280 3.448686 AGATTTGTGCTTAGATCCGACG 58.551 45.455 0.00 0.00 0.00 5.12
283 284 4.642445 TTGTGCTTAGATCCGACGATAA 57.358 40.909 0.00 0.00 0.00 1.75
289 290 5.048507 GCTTAGATCCGACGATAAAAAGGT 58.951 41.667 0.00 0.00 0.00 3.50
290 291 5.175308 GCTTAGATCCGACGATAAAAAGGTC 59.825 44.000 0.00 0.00 0.00 3.85
295 296 3.265138 CGACGATAAAAAGGTCGTTCG 57.735 47.619 4.78 4.20 46.07 3.95
296 297 2.027214 CGACGATAAAAAGGTCGTTCGG 59.973 50.000 4.78 0.00 46.07 4.30
349 350 7.166307 GGCCGTTATCAATTCCGTAAATTTAAC 59.834 37.037 0.00 0.00 35.32 2.01
350 351 7.097329 GCCGTTATCAATTCCGTAAATTTAACG 60.097 37.037 18.72 18.72 44.34 3.18
351 352 8.115520 CCGTTATCAATTCCGTAAATTTAACGA 58.884 33.333 22.78 6.58 45.74 3.85
352 353 9.475505 CGTTATCAATTCCGTAAATTTAACGAA 57.524 29.630 19.78 13.15 45.74 3.85
356 357 9.680315 ATCAATTCCGTAAATTTAACGAAAACA 57.320 25.926 16.57 4.91 42.90 2.83
357 358 8.956014 TCAATTCCGTAAATTTAACGAAAACAC 58.044 29.630 16.57 0.00 42.90 3.32
358 359 8.960075 CAATTCCGTAAATTTAACGAAAACACT 58.040 29.630 16.57 0.05 42.90 3.55
361 362 8.986039 TCCGTAAATTTAACGAAAACACTAAC 57.014 30.769 16.57 0.00 42.90 2.34
362 363 7.791590 TCCGTAAATTTAACGAAAACACTAACG 59.208 33.333 16.57 7.32 42.90 3.18
363 364 7.407142 CCGTAAATTTAACGAAAACACTAACGC 60.407 37.037 16.57 0.00 42.90 4.84
364 365 6.736807 AAATTTAACGAAAACACTAACGCC 57.263 33.333 0.00 0.00 0.00 5.68
365 366 3.876242 TTAACGAAAACACTAACGCCC 57.124 42.857 0.00 0.00 0.00 6.13
366 367 1.666054 AACGAAAACACTAACGCCCA 58.334 45.000 0.00 0.00 0.00 5.36
367 368 0.939419 ACGAAAACACTAACGCCCAC 59.061 50.000 0.00 0.00 0.00 4.61
368 369 0.938713 CGAAAACACTAACGCCCACA 59.061 50.000 0.00 0.00 0.00 4.17
369 370 1.333435 CGAAAACACTAACGCCCACAC 60.333 52.381 0.00 0.00 0.00 3.82
370 371 0.658897 AAAACACTAACGCCCACACG 59.341 50.000 0.00 0.00 39.50 4.49
379 380 4.675029 GCCCACACGTGTAGGCGT 62.675 66.667 36.08 5.25 42.49 5.68
380 381 2.029964 CCCACACGTGTAGGCGTT 59.970 61.111 22.90 0.00 43.83 4.84
381 382 1.289694 CCCACACGTGTAGGCGTTA 59.710 57.895 22.90 0.00 43.83 3.18
382 383 1.010419 CCCACACGTGTAGGCGTTAC 61.010 60.000 22.90 0.00 43.83 2.50
383 384 1.010419 CCACACGTGTAGGCGTTACC 61.010 60.000 22.90 0.00 43.83 2.85
384 385 1.010419 CACACGTGTAGGCGTTACCC 61.010 60.000 22.90 0.00 43.83 3.69
385 386 1.289694 CACGTGTAGGCGTTACCCA 59.710 57.895 7.58 0.00 43.83 4.51
386 387 0.319727 CACGTGTAGGCGTTACCCAA 60.320 55.000 7.58 0.00 43.83 4.12
387 388 0.319813 ACGTGTAGGCGTTACCCAAC 60.320 55.000 0.00 0.00 43.04 3.77
388 389 0.037975 CGTGTAGGCGTTACCCAACT 60.038 55.000 0.00 0.00 40.58 3.16
389 390 1.718396 GTGTAGGCGTTACCCAACTC 58.282 55.000 0.00 0.00 40.58 3.01
390 391 0.244450 TGTAGGCGTTACCCAACTCG 59.756 55.000 0.00 0.00 40.58 4.18
391 392 1.080435 GTAGGCGTTACCCAACTCGC 61.080 60.000 0.00 0.00 46.42 5.03
393 394 3.122971 GCGTTACCCAACTCGCCC 61.123 66.667 0.00 0.00 42.33 6.13
394 395 2.344500 CGTTACCCAACTCGCCCA 59.656 61.111 0.00 0.00 32.09 5.36
395 396 2.030958 CGTTACCCAACTCGCCCAC 61.031 63.158 0.00 0.00 32.09 4.61
396 397 1.071814 GTTACCCAACTCGCCCACA 59.928 57.895 0.00 0.00 0.00 4.17
397 398 1.071814 TTACCCAACTCGCCCACAC 59.928 57.895 0.00 0.00 0.00 3.82
398 399 2.718747 TTACCCAACTCGCCCACACG 62.719 60.000 0.00 0.00 0.00 4.49
399 400 4.619227 CCCAACTCGCCCACACGT 62.619 66.667 0.00 0.00 0.00 4.49
400 401 3.041940 CCAACTCGCCCACACGTC 61.042 66.667 0.00 0.00 0.00 4.34
401 402 2.029073 CAACTCGCCCACACGTCT 59.971 61.111 0.00 0.00 0.00 4.18
402 403 2.029073 AACTCGCCCACACGTCTG 59.971 61.111 0.00 0.00 0.00 3.51
403 404 3.515316 AACTCGCCCACACGTCTGG 62.515 63.158 2.34 2.34 0.00 3.86
404 405 3.680786 CTCGCCCACACGTCTGGA 61.681 66.667 11.92 0.00 32.30 3.86
405 406 2.994995 TCGCCCACACGTCTGGAT 60.995 61.111 11.92 0.00 32.30 3.41
406 407 2.509336 CGCCCACACGTCTGGATC 60.509 66.667 11.92 1.97 32.30 3.36
407 408 2.509336 GCCCACACGTCTGGATCG 60.509 66.667 11.92 0.00 32.30 3.69
408 409 2.970639 CCCACACGTCTGGATCGT 59.029 61.111 11.92 0.00 42.33 3.73
409 410 1.153823 CCCACACGTCTGGATCGTC 60.154 63.158 11.92 0.00 39.55 4.20
410 411 1.514228 CCACACGTCTGGATCGTCG 60.514 63.158 3.36 0.00 39.55 5.12
411 412 1.209383 CACACGTCTGGATCGTCGT 59.791 57.895 0.00 0.00 39.55 4.34
412 413 0.386858 CACACGTCTGGATCGTCGTT 60.387 55.000 0.00 0.00 39.55 3.85
413 414 0.109873 ACACGTCTGGATCGTCGTTC 60.110 55.000 0.00 0.00 39.55 3.95
414 415 0.109919 CACGTCTGGATCGTCGTTCA 60.110 55.000 5.71 0.00 39.55 3.18
415 416 0.594602 ACGTCTGGATCGTCGTTCAA 59.405 50.000 5.71 0.00 36.85 2.69
416 417 1.260206 CGTCTGGATCGTCGTTCAAG 58.740 55.000 5.71 3.75 0.00 3.02
417 418 1.630148 GTCTGGATCGTCGTTCAAGG 58.370 55.000 7.67 0.00 0.00 3.61
418 419 1.067776 GTCTGGATCGTCGTTCAAGGT 60.068 52.381 7.67 0.00 0.00 3.50
419 420 1.067846 TCTGGATCGTCGTTCAAGGTG 60.068 52.381 7.67 0.00 0.00 4.00
420 421 0.963225 TGGATCGTCGTTCAAGGTGA 59.037 50.000 5.71 0.00 0.00 4.02
421 422 1.341852 TGGATCGTCGTTCAAGGTGAA 59.658 47.619 5.71 0.00 33.32 3.18
422 423 2.028476 TGGATCGTCGTTCAAGGTGAAT 60.028 45.455 5.71 0.00 38.79 2.57
423 424 3.000727 GGATCGTCGTTCAAGGTGAATT 58.999 45.455 5.71 0.00 38.79 2.17
424 425 3.435671 GGATCGTCGTTCAAGGTGAATTT 59.564 43.478 5.71 0.00 38.79 1.82
425 426 3.870723 TCGTCGTTCAAGGTGAATTTG 57.129 42.857 0.00 0.00 38.79 2.32
426 427 2.546368 TCGTCGTTCAAGGTGAATTTGG 59.454 45.455 0.00 0.00 38.79 3.28
427 428 2.289547 CGTCGTTCAAGGTGAATTTGGT 59.710 45.455 0.00 0.00 38.79 3.67
428 429 3.628017 GTCGTTCAAGGTGAATTTGGTG 58.372 45.455 0.00 0.00 38.79 4.17
429 430 3.066203 GTCGTTCAAGGTGAATTTGGTGT 59.934 43.478 0.00 0.00 38.79 4.16
430 431 3.066064 TCGTTCAAGGTGAATTTGGTGTG 59.934 43.478 0.00 0.00 38.79 3.82
431 432 3.123050 GTTCAAGGTGAATTTGGTGTGC 58.877 45.455 0.00 0.00 38.79 4.57
432 433 1.686052 TCAAGGTGAATTTGGTGTGCC 59.314 47.619 0.00 0.00 0.00 5.01
433 434 1.411977 CAAGGTGAATTTGGTGTGCCA 59.588 47.619 0.00 0.00 44.38 4.92
434 435 1.039856 AGGTGAATTTGGTGTGCCAC 58.960 50.000 0.00 0.00 46.01 5.01
435 436 0.318614 GGTGAATTTGGTGTGCCACG 60.319 55.000 0.00 0.00 46.01 4.94
436 437 0.383949 GTGAATTTGGTGTGCCACGT 59.616 50.000 0.00 0.00 46.01 4.49
437 438 1.604755 GTGAATTTGGTGTGCCACGTA 59.395 47.619 0.00 0.00 46.01 3.57
438 439 1.876799 TGAATTTGGTGTGCCACGTAG 59.123 47.619 0.00 0.00 46.01 3.51
439 440 1.199097 GAATTTGGTGTGCCACGTAGG 59.801 52.381 0.00 0.00 46.01 3.18
440 441 0.398696 ATTTGGTGTGCCACGTAGGA 59.601 50.000 8.04 0.00 46.01 2.94
441 442 0.533308 TTTGGTGTGCCACGTAGGAC 60.533 55.000 0.00 0.00 46.01 3.85
442 443 2.702751 TTGGTGTGCCACGTAGGACG 62.703 60.000 0.82 0.00 46.01 4.79
451 452 4.143333 CGTAGGACGGGGCTGGTG 62.143 72.222 0.00 0.00 38.08 4.17
452 453 3.001406 GTAGGACGGGGCTGGTGT 61.001 66.667 0.00 0.00 0.00 4.16
453 454 3.000819 TAGGACGGGGCTGGTGTG 61.001 66.667 0.00 0.00 0.00 3.82
454 455 3.839046 TAGGACGGGGCTGGTGTGT 62.839 63.158 0.00 0.00 0.00 3.72
462 463 3.964875 GCTGGTGTGTGGGCGTTG 61.965 66.667 0.00 0.00 0.00 4.10
473 474 1.285950 GGGCGTTGAAGAGTTTGCC 59.714 57.895 0.00 0.00 41.72 4.52
474 475 1.285950 GGCGTTGAAGAGTTTGCCC 59.714 57.895 0.00 0.00 36.51 5.36
475 476 1.452145 GGCGTTGAAGAGTTTGCCCA 61.452 55.000 0.00 0.00 36.51 5.36
476 477 0.317854 GCGTTGAAGAGTTTGCCCAC 60.318 55.000 0.00 0.00 0.00 4.61
477 478 1.021202 CGTTGAAGAGTTTGCCCACA 58.979 50.000 0.00 0.00 0.00 4.17
478 479 1.268539 CGTTGAAGAGTTTGCCCACAC 60.269 52.381 0.00 0.00 0.00 3.82
479 480 1.021202 TTGAAGAGTTTGCCCACACG 58.979 50.000 0.00 0.00 0.00 4.49
481 482 0.586802 GAAGAGTTTGCCCACACGTC 59.413 55.000 0.00 0.00 0.00 4.34
482 483 0.818040 AAGAGTTTGCCCACACGTCC 60.818 55.000 0.00 0.00 0.00 4.79
484 485 4.322385 GTTTGCCCACACGTCCGC 62.322 66.667 0.00 0.00 0.00 5.54
485 486 4.858680 TTTGCCCACACGTCCGCA 62.859 61.111 0.00 0.00 0.00 5.69
490 491 4.602259 CCACACGTCCGCACCACT 62.602 66.667 0.00 0.00 0.00 4.00
491 492 3.036084 CACACGTCCGCACCACTC 61.036 66.667 0.00 0.00 0.00 3.51
492 493 3.224324 ACACGTCCGCACCACTCT 61.224 61.111 0.00 0.00 0.00 3.24
493 494 2.734723 CACGTCCGCACCACTCTG 60.735 66.667 0.00 0.00 0.00 3.35
494 495 3.224324 ACGTCCGCACCACTCTGT 61.224 61.111 0.00 0.00 0.00 3.41
496 497 1.594293 CGTCCGCACCACTCTGTTT 60.594 57.895 0.00 0.00 0.00 2.83
497 498 1.831389 CGTCCGCACCACTCTGTTTG 61.831 60.000 0.00 0.00 0.00 2.93
500 501 2.186160 CGCACCACTCTGTTTGCCA 61.186 57.895 0.00 0.00 0.00 4.92
501 502 1.656441 GCACCACTCTGTTTGCCAG 59.344 57.895 0.00 0.00 42.97 4.85
502 503 1.656441 CACCACTCTGTTTGCCAGC 59.344 57.895 0.00 0.00 41.25 4.85
503 504 0.820891 CACCACTCTGTTTGCCAGCT 60.821 55.000 0.00 0.00 41.25 4.24
505 506 1.285023 CACTCTGTTTGCCAGCTGC 59.715 57.895 8.66 4.57 41.25 5.25
506 507 2.256591 ACTCTGTTTGCCAGCTGCG 61.257 57.895 8.66 2.70 45.60 5.18
507 508 2.203195 TCTGTTTGCCAGCTGCGT 60.203 55.556 8.66 0.00 45.60 5.24
509 510 1.659335 CTGTTTGCCAGCTGCGTTG 60.659 57.895 8.66 0.00 45.60 4.10
510 511 2.340453 CTGTTTGCCAGCTGCGTTGT 62.340 55.000 8.66 0.00 45.60 3.32
511 512 1.945662 GTTTGCCAGCTGCGTTGTG 60.946 57.895 8.66 0.00 45.60 3.33
512 513 2.413963 TTTGCCAGCTGCGTTGTGT 61.414 52.632 8.66 0.00 45.60 3.72
513 514 1.943116 TTTGCCAGCTGCGTTGTGTT 61.943 50.000 8.66 0.00 45.60 3.32
515 516 2.332514 CCAGCTGCGTTGTGTTGG 59.667 61.111 8.66 0.00 0.00 3.77
516 517 2.353839 CAGCTGCGTTGTGTTGGC 60.354 61.111 0.00 0.00 0.00 4.52
517 518 3.952675 AGCTGCGTTGTGTTGGCG 61.953 61.111 0.00 0.00 0.00 5.69
518 519 3.947841 GCTGCGTTGTGTTGGCGA 61.948 61.111 0.00 0.00 0.00 5.54
520 521 1.654137 CTGCGTTGTGTTGGCGAAC 60.654 57.895 4.41 4.41 0.00 3.95
521 522 2.047151 CTGCGTTGTGTTGGCGAACT 62.047 55.000 13.01 0.00 32.79 3.01
522 523 1.654137 GCGTTGTGTTGGCGAACTG 60.654 57.895 13.01 0.00 32.79 3.16
523 524 1.654137 CGTTGTGTTGGCGAACTGC 60.654 57.895 13.01 6.49 45.38 4.40
524 525 1.727467 GTTGTGTTGGCGAACTGCT 59.273 52.632 13.01 0.00 45.43 4.24
527 528 0.814457 TGTGTTGGCGAACTGCTTTT 59.186 45.000 13.01 0.00 45.43 2.27
530 531 0.576798 GTTGGCGAACTGCTTTTTGC 59.423 50.000 4.11 2.37 45.43 3.68
532 533 1.664649 GGCGAACTGCTTTTTGCCC 60.665 57.895 15.02 2.00 46.77 5.36
534 535 1.215014 GCGAACTGCTTTTTGCCCAC 61.215 55.000 0.00 0.00 42.00 4.61
535 536 0.102120 CGAACTGCTTTTTGCCCACA 59.898 50.000 0.00 0.00 42.00 4.17
538 539 0.461135 ACTGCTTTTTGCCCACACAG 59.539 50.000 0.00 0.00 42.00 3.66
539 540 0.877213 CTGCTTTTTGCCCACACAGC 60.877 55.000 0.00 0.00 42.00 4.40
540 541 1.595109 GCTTTTTGCCCACACAGCC 60.595 57.895 0.00 0.00 35.15 4.85
541 542 1.821936 CTTTTTGCCCACACAGCCA 59.178 52.632 0.00 0.00 0.00 4.75
542 543 0.530431 CTTTTTGCCCACACAGCCAC 60.530 55.000 0.00 0.00 0.00 5.01
543 544 1.965754 TTTTTGCCCACACAGCCACC 61.966 55.000 0.00 0.00 0.00 4.61
544 545 3.668922 TTTGCCCACACAGCCACCA 62.669 57.895 0.00 0.00 0.00 4.17
545 546 4.892965 TGCCCACACAGCCACCAC 62.893 66.667 0.00 0.00 0.00 4.16
547 548 3.889692 CCCACACAGCCACCACCT 61.890 66.667 0.00 0.00 0.00 4.00
549 550 1.003355 CCACACAGCCACCACCTAG 60.003 63.158 0.00 0.00 0.00 3.02
550 551 1.003355 CACACAGCCACCACCTAGG 60.003 63.158 7.41 7.41 45.67 3.02
559 560 2.586079 CCACCTAGGTCATGCGCG 60.586 66.667 12.84 0.00 0.00 6.86
560 561 2.184322 CACCTAGGTCATGCGCGT 59.816 61.111 12.84 0.00 0.00 6.01
561 562 2.167219 CACCTAGGTCATGCGCGTG 61.167 63.158 23.73 23.73 0.00 5.34
564 565 2.125713 TAGGTCATGCGCGTGTGG 60.126 61.111 27.72 4.17 0.00 4.17
565 566 3.657448 TAGGTCATGCGCGTGTGGG 62.657 63.158 27.72 3.77 0.00 4.61
577 578 1.733526 GTGTGGGCGAACTGCTTTT 59.266 52.632 0.00 0.00 45.43 2.27
583 584 3.339731 CGAACTGCTTTTCGCCCA 58.660 55.556 7.23 0.00 41.73 5.36
585 586 1.781025 CGAACTGCTTTTCGCCCACA 61.781 55.000 7.23 0.00 41.73 4.17
586 587 0.317854 GAACTGCTTTTCGCCCACAC 60.318 55.000 0.00 0.00 38.05 3.82
587 588 2.058829 AACTGCTTTTCGCCCACACG 62.059 55.000 0.00 0.00 38.05 4.49
588 589 2.203084 TGCTTTTCGCCCACACGA 60.203 55.556 0.00 0.00 41.04 4.35
589 590 2.251371 GCTTTTCGCCCACACGAC 59.749 61.111 0.00 0.00 42.78 4.34
591 592 1.278637 CTTTTCGCCCACACGACAC 59.721 57.895 0.00 0.00 42.78 3.67
592 593 1.153329 TTTTCGCCCACACGACACT 60.153 52.632 0.00 0.00 42.78 3.55
593 594 1.155424 TTTTCGCCCACACGACACTC 61.155 55.000 0.00 0.00 42.78 3.51
595 596 3.991051 CGCCCACACGACACTCCT 61.991 66.667 0.00 0.00 34.06 3.69
596 597 2.632544 CGCCCACACGACACTCCTA 61.633 63.158 0.00 0.00 34.06 2.94
598 599 1.590147 CCCACACGACACTCCTACC 59.410 63.158 0.00 0.00 0.00 3.18
599 600 0.898789 CCCACACGACACTCCTACCT 60.899 60.000 0.00 0.00 0.00 3.08
603 604 1.340248 ACACGACACTCCTACCTTGTG 59.660 52.381 0.00 0.00 37.67 3.33
604 605 0.966920 ACGACACTCCTACCTTGTGG 59.033 55.000 0.00 0.00 36.16 4.17
606 607 1.825474 CGACACTCCTACCTTGTGGAT 59.175 52.381 0.00 0.00 36.16 3.41
608 609 1.909302 ACACTCCTACCTTGTGGATGG 59.091 52.381 0.00 0.00 36.16 3.51
609 610 0.912486 ACTCCTACCTTGTGGATGGC 59.088 55.000 0.00 0.00 37.04 4.40
611 612 1.281867 CTCCTACCTTGTGGATGGCAA 59.718 52.381 0.00 0.00 37.04 4.52
613 614 1.004745 CCTACCTTGTGGATGGCAACT 59.995 52.381 0.00 0.00 37.04 3.16
614 615 2.086869 CTACCTTGTGGATGGCAACTG 58.913 52.381 0.00 0.00 37.04 3.16
615 616 1.181098 ACCTTGTGGATGGCAACTGC 61.181 55.000 0.00 0.00 37.42 4.40
617 618 0.242825 CTTGTGGATGGCAACTGCAG 59.757 55.000 13.48 13.48 44.36 4.41
618 619 0.467844 TTGTGGATGGCAACTGCAGT 60.468 50.000 15.25 15.25 44.36 4.40
619 620 0.467844 TGTGGATGGCAACTGCAGTT 60.468 50.000 26.36 26.36 44.36 3.16
621 622 1.200020 GTGGATGGCAACTGCAGTTAC 59.800 52.381 30.67 25.03 44.36 2.50
622 623 0.447801 GGATGGCAACTGCAGTTACG 59.552 55.000 30.67 20.47 44.36 3.18
626 627 1.567537 GCAACTGCAGTTACGCGAA 59.432 52.632 30.67 0.00 41.59 4.70
627 628 0.165944 GCAACTGCAGTTACGCGAAT 59.834 50.000 30.67 4.52 41.59 3.34
628 629 1.869503 CAACTGCAGTTACGCGAATG 58.130 50.000 30.67 13.79 36.32 2.67
629 630 1.194547 CAACTGCAGTTACGCGAATGT 59.805 47.619 30.67 2.88 36.32 2.71
631 632 0.095245 CTGCAGTTACGCGAATGTGG 59.905 55.000 15.93 0.00 33.35 4.17
632 633 1.226018 GCAGTTACGCGAATGTGGC 60.226 57.895 15.93 5.29 0.00 5.01
635 636 0.515564 AGTTACGCGAATGTGGCAAC 59.484 50.000 15.93 3.50 0.00 4.17
636 637 0.515564 GTTACGCGAATGTGGCAACT 59.484 50.000 15.93 0.00 37.61 3.16
638 639 1.348538 TACGCGAATGTGGCAACTCG 61.349 55.000 15.93 9.12 37.61 4.18
639 640 2.480555 GCGAATGTGGCAACTCGG 59.519 61.111 13.76 0.00 37.61 4.63
641 642 1.573829 GCGAATGTGGCAACTCGGAA 61.574 55.000 13.76 0.00 37.61 4.30
642 643 0.165944 CGAATGTGGCAACTCGGAAC 59.834 55.000 6.30 0.00 37.61 3.62
643 644 1.234821 GAATGTGGCAACTCGGAACA 58.765 50.000 0.00 0.00 37.61 3.18
644 645 0.951558 AATGTGGCAACTCGGAACAC 59.048 50.000 0.00 0.00 37.61 3.32
646 647 1.092921 TGTGGCAACTCGGAACACAC 61.093 55.000 0.00 0.00 37.16 3.82
647 648 1.092921 GTGGCAACTCGGAACACACA 61.093 55.000 0.00 0.00 37.61 3.72
648 649 1.092921 TGGCAACTCGGAACACACAC 61.093 55.000 0.00 0.00 37.61 3.82
649 650 1.092921 GGCAACTCGGAACACACACA 61.093 55.000 0.00 0.00 0.00 3.72
651 652 1.334059 GCAACTCGGAACACACACATG 60.334 52.381 0.00 0.00 0.00 3.21
652 653 2.209273 CAACTCGGAACACACACATGA 58.791 47.619 0.00 0.00 0.00 3.07
653 654 1.865865 ACTCGGAACACACACATGAC 58.134 50.000 0.00 0.00 0.00 3.06
654 655 1.138069 ACTCGGAACACACACATGACA 59.862 47.619 0.00 0.00 0.00 3.58
655 656 2.209273 CTCGGAACACACACATGACAA 58.791 47.619 0.00 0.00 0.00 3.18
656 657 1.937223 TCGGAACACACACATGACAAC 59.063 47.619 0.00 0.00 0.00 3.32
657 658 1.939934 CGGAACACACACATGACAACT 59.060 47.619 0.00 0.00 0.00 3.16
658 659 2.286359 CGGAACACACACATGACAACTG 60.286 50.000 0.00 0.00 0.00 3.16
659 660 2.682856 GGAACACACACATGACAACTGT 59.317 45.455 0.00 0.00 0.00 3.55
660 661 3.874543 GGAACACACACATGACAACTGTA 59.125 43.478 0.00 0.00 0.00 2.74
663 664 6.449635 AACACACACATGACAACTGTAATT 57.550 33.333 0.00 0.00 0.00 1.40
665 666 5.822519 ACACACACATGACAACTGTAATTCT 59.177 36.000 0.00 0.00 0.00 2.40
666 667 6.318648 ACACACACATGACAACTGTAATTCTT 59.681 34.615 0.00 0.00 0.00 2.52
667 668 7.148086 ACACACACATGACAACTGTAATTCTTT 60.148 33.333 0.00 0.00 0.00 2.52
668 669 7.166307 CACACACATGACAACTGTAATTCTTTG 59.834 37.037 0.00 0.00 0.00 2.77
669 670 6.142798 CACACATGACAACTGTAATTCTTTGC 59.857 38.462 0.00 0.00 0.00 3.68
670 671 6.039717 ACACATGACAACTGTAATTCTTTGCT 59.960 34.615 0.00 0.00 0.00 3.91
671 672 7.228507 ACACATGACAACTGTAATTCTTTGCTA 59.771 33.333 0.00 0.00 0.00 3.49
672 673 7.535258 CACATGACAACTGTAATTCTTTGCTAC 59.465 37.037 0.00 0.00 0.00 3.58
673 674 7.228507 ACATGACAACTGTAATTCTTTGCTACA 59.771 33.333 0.00 0.00 0.00 2.74
675 676 5.985781 ACAACTGTAATTCTTTGCTACACG 58.014 37.500 0.00 0.00 0.00 4.49
676 677 5.049680 ACAACTGTAATTCTTTGCTACACGG 60.050 40.000 0.00 0.00 0.00 4.94
677 678 3.435671 ACTGTAATTCTTTGCTACACGGC 59.564 43.478 0.00 0.00 0.00 5.68
678 679 3.403968 TGTAATTCTTTGCTACACGGCA 58.596 40.909 0.00 0.00 40.74 5.69
683 684 3.339731 TTGCTACACGGCAACTGC 58.660 55.556 0.00 0.00 45.64 4.40
684 685 1.524849 TTGCTACACGGCAACTGCA 60.525 52.632 3.76 0.00 45.64 4.41
687 688 1.507141 GCTACACGGCAACTGCAGTT 61.507 55.000 26.36 26.36 46.84 3.16
689 690 1.459592 CTACACGGCAACTGCAGTTAC 59.540 52.381 30.67 25.03 46.84 2.50
691 692 2.173382 CGGCAACTGCAGTTACGC 59.827 61.111 30.67 27.96 44.36 4.42
692 693 2.173382 GGCAACTGCAGTTACGCG 59.827 61.111 30.67 19.41 44.36 6.01
694 695 1.567537 GCAACTGCAGTTACGCGAA 59.432 52.632 30.67 0.00 41.59 4.70
695 696 0.721483 GCAACTGCAGTTACGCGAAC 60.721 55.000 30.67 13.24 41.59 3.95
696 697 0.448861 CAACTGCAGTTACGCGAACG 60.449 55.000 30.67 12.86 43.37 3.95
706 707 3.334751 CGCGAACGTGGCAACTCA 61.335 61.111 0.00 0.00 37.61 3.41
707 708 2.551270 GCGAACGTGGCAACTCAG 59.449 61.111 6.96 0.00 37.61 3.35
708 709 2.244651 GCGAACGTGGCAACTCAGT 61.245 57.895 6.96 0.00 37.61 3.41
710 711 0.782384 CGAACGTGGCAACTCAGTAC 59.218 55.000 0.00 0.00 37.61 2.73
714 715 0.859232 CGTGGCAACTCAGTACACAC 59.141 55.000 7.67 2.79 37.61 3.82
716 717 1.597663 GTGGCAACTCAGTACACACAC 59.402 52.381 0.00 0.00 37.61 3.82
717 718 1.208293 TGGCAACTCAGTACACACACA 59.792 47.619 0.00 0.00 37.61 3.72
719 720 2.224079 GGCAACTCAGTACACACACATG 59.776 50.000 0.00 0.00 0.00 3.21
720 721 2.224079 GCAACTCAGTACACACACATGG 59.776 50.000 0.00 0.00 0.00 3.66
721 722 2.169832 ACTCAGTACACACACATGGC 57.830 50.000 0.00 0.00 0.00 4.40
722 723 1.416030 ACTCAGTACACACACATGGCA 59.584 47.619 0.00 0.00 0.00 4.92
723 724 2.158827 ACTCAGTACACACACATGGCAA 60.159 45.455 0.00 0.00 0.00 4.52
724 725 3.076621 CTCAGTACACACACATGGCAAT 58.923 45.455 0.00 0.00 0.00 3.56
725 726 3.485394 TCAGTACACACACATGGCAATT 58.515 40.909 0.00 0.00 0.00 2.32
726 727 3.252944 TCAGTACACACACATGGCAATTG 59.747 43.478 0.00 0.00 0.00 2.32
727 728 3.004629 CAGTACACACACATGGCAATTGT 59.995 43.478 7.40 0.00 0.00 2.71
730 731 2.629137 ACACACACATGGCAATTGTGAT 59.371 40.909 28.60 17.59 45.83 3.06
731 732 3.069872 ACACACACATGGCAATTGTGATT 59.930 39.130 28.60 16.51 45.83 2.57
732 733 3.676172 CACACACATGGCAATTGTGATTC 59.324 43.478 28.60 0.00 45.83 2.52
734 735 4.039488 ACACACATGGCAATTGTGATTCTT 59.961 37.500 28.60 10.89 45.83 2.52
735 736 4.992319 CACACATGGCAATTGTGATTCTTT 59.008 37.500 23.92 1.82 45.83 2.52
736 737 4.992319 ACACATGGCAATTGTGATTCTTTG 59.008 37.500 23.92 1.58 45.83 2.77
738 739 4.250464 CATGGCAATTGTGATTCTTTGCT 58.750 39.130 7.40 0.00 43.04 3.91
739 740 5.047164 ACATGGCAATTGTGATTCTTTGCTA 60.047 36.000 7.40 1.14 43.04 3.49
740 741 4.808558 TGGCAATTGTGATTCTTTGCTAC 58.191 39.130 7.40 0.00 43.04 3.58
742 743 5.047164 TGGCAATTGTGATTCTTTGCTACAT 60.047 36.000 7.40 0.00 43.04 2.29
744 745 5.290158 GCAATTGTGATTCTTTGCTACATGG 59.710 40.000 7.40 0.00 40.90 3.66
752 753 3.033419 TTGCTACATGGCAACTGCA 57.967 47.368 5.40 0.00 45.64 4.41
753 754 0.883153 TTGCTACATGGCAACTGCAG 59.117 50.000 13.48 13.48 45.64 4.41
755 756 0.883833 GCTACATGGCAACTGCAGTT 59.116 50.000 26.36 26.36 44.36 3.16
763 764 2.935955 AACTGCAGTTGCGCGTAC 59.064 55.556 30.66 6.69 45.83 3.67
764 765 2.938823 AACTGCAGTTGCGCGTACG 61.939 57.895 30.66 11.84 45.83 3.67
765 766 3.403057 CTGCAGTTGCGCGTACGT 61.403 61.111 17.90 0.00 45.83 3.57
766 767 3.614024 CTGCAGTTGCGCGTACGTG 62.614 63.158 23.94 23.94 45.83 4.49
767 768 4.424430 GCAGTTGCGCGTACGTGG 62.424 66.667 28.26 16.26 42.83 4.94
768 769 4.424430 CAGTTGCGCGTACGTGGC 62.424 66.667 28.26 24.49 42.83 5.01
774 775 3.773630 CGCGTACGTGGCAACCAG 61.774 66.667 20.84 0.00 32.34 4.00
775 776 2.356553 GCGTACGTGGCAACCAGA 60.357 61.111 17.90 0.00 32.34 3.86
776 777 1.740296 GCGTACGTGGCAACCAGAT 60.740 57.895 17.90 0.00 32.34 2.90
780 781 2.093152 CGTACGTGGCAACCAGATAAAC 59.907 50.000 7.22 0.00 32.34 2.01
781 782 2.264005 ACGTGGCAACCAGATAAACA 57.736 45.000 0.00 0.00 32.34 2.83
783 784 1.876799 CGTGGCAACCAGATAAACACA 59.123 47.619 0.00 0.00 32.34 3.72
784 785 2.350388 CGTGGCAACCAGATAAACACAC 60.350 50.000 0.00 0.00 32.34 3.82
785 786 2.621055 GTGGCAACCAGATAAACACACA 59.379 45.455 0.00 0.00 32.34 3.72
786 787 3.255642 GTGGCAACCAGATAAACACACAT 59.744 43.478 0.00 0.00 32.34 3.21
787 788 3.255395 TGGCAACCAGATAAACACACATG 59.745 43.478 0.00 0.00 0.00 3.21
788 789 3.367292 GGCAACCAGATAAACACACATGG 60.367 47.826 0.00 0.00 0.00 3.66
789 790 3.505680 GCAACCAGATAAACACACATGGA 59.494 43.478 0.00 0.00 0.00 3.41
790 791 4.615912 GCAACCAGATAAACACACATGGAC 60.616 45.833 0.00 0.00 0.00 4.02
792 793 4.072131 ACCAGATAAACACACATGGACAC 58.928 43.478 0.00 0.00 0.00 3.67
793 794 4.202461 ACCAGATAAACACACATGGACACT 60.202 41.667 0.00 0.00 0.00 3.55
794 795 4.154737 CCAGATAAACACACATGGACACTG 59.845 45.833 0.00 0.00 0.00 3.66
795 796 4.756642 CAGATAAACACACATGGACACTGT 59.243 41.667 0.00 0.00 0.00 3.55
797 798 2.708216 AACACACATGGACACTGTGA 57.292 45.000 15.86 0.00 45.44 3.58
800 801 4.350368 ACACACATGGACACTGTGATTA 57.650 40.909 15.86 0.00 45.44 1.75
801 802 4.713553 ACACACATGGACACTGTGATTAA 58.286 39.130 15.86 0.00 45.44 1.40
802 803 4.515191 ACACACATGGACACTGTGATTAAC 59.485 41.667 15.86 0.38 45.44 2.01
804 805 5.008514 CACACATGGACACTGTGATTAACAA 59.991 40.000 15.86 0.00 45.44 2.83
805 806 5.769662 ACACATGGACACTGTGATTAACAAT 59.230 36.000 15.86 0.00 45.44 2.71
807 808 7.094805 ACACATGGACACTGTGATTAACAATAC 60.095 37.037 15.86 0.00 45.44 1.89
808 809 6.939730 ACATGGACACTGTGATTAACAATACA 59.060 34.615 15.86 0.00 38.67 2.29
809 810 7.611467 ACATGGACACTGTGATTAACAATACAT 59.389 33.333 15.86 0.00 38.67 2.29
810 811 7.376435 TGGACACTGTGATTAACAATACATG 57.624 36.000 15.86 0.00 38.67 3.21
811 812 6.374053 TGGACACTGTGATTAACAATACATGG 59.626 38.462 15.86 0.00 38.67 3.66
815 816 6.527722 CACTGTGATTAACAATACATGGCAAC 59.472 38.462 0.32 0.00 38.67 4.17
817 818 7.609918 ACTGTGATTAACAATACATGGCAACTA 59.390 33.333 0.00 0.00 38.67 2.24
819 820 8.404765 TGTGATTAACAATACATGGCAACTATG 58.595 33.333 0.00 0.00 35.24 2.23
820 821 7.862372 GTGATTAACAATACATGGCAACTATGG 59.138 37.037 0.00 0.00 37.61 2.74
821 822 7.559533 TGATTAACAATACATGGCAACTATGGT 59.440 33.333 0.00 0.00 37.61 3.55
822 823 7.710676 TTAACAATACATGGCAACTATGGTT 57.289 32.000 10.69 10.69 35.86 3.67
843 844 3.966215 CCACACGTGGCAACTAGG 58.034 61.111 21.57 5.92 44.73 3.02
845 846 0.319083 CCACACGTGGCAACTAGGTA 59.681 55.000 21.57 0.00 44.73 3.08
846 847 1.270412 CCACACGTGGCAACTAGGTAA 60.270 52.381 21.57 0.00 44.73 2.85
848 849 2.222445 CACACGTGGCAACTAGGTAAAC 59.778 50.000 21.57 0.00 37.61 2.01
850 851 2.222445 CACGTGGCAACTAGGTAAACAC 59.778 50.000 7.95 0.00 37.61 3.32
851 852 2.158928 ACGTGGCAACTAGGTAAACACA 60.159 45.455 8.73 0.00 37.61 3.72
852 853 2.222445 CGTGGCAACTAGGTAAACACAC 59.778 50.000 8.73 0.00 37.61 3.82
853 854 3.207778 GTGGCAACTAGGTAAACACACA 58.792 45.455 0.00 0.00 37.61 3.72
856 857 3.190535 GGCAACTAGGTAAACACACATGG 59.809 47.826 0.00 0.00 0.00 3.66
858 859 4.998672 GCAACTAGGTAAACACACATGGTA 59.001 41.667 0.00 0.00 0.00 3.25
859 860 5.470777 GCAACTAGGTAAACACACATGGTAA 59.529 40.000 0.00 0.00 0.00 2.85
860 861 6.567132 GCAACTAGGTAAACACACATGGTAAC 60.567 42.308 0.00 0.00 0.00 2.50
861 862 6.429521 ACTAGGTAAACACACATGGTAACT 57.570 37.500 0.00 0.00 37.61 2.24
862 863 7.543359 ACTAGGTAAACACACATGGTAACTA 57.457 36.000 0.00 0.00 37.61 2.24
864 865 6.429521 AGGTAAACACACATGGTAACTACT 57.570 37.500 0.00 0.00 37.61 2.57
865 866 6.228258 AGGTAAACACACATGGTAACTACTG 58.772 40.000 0.00 0.00 37.61 2.74
866 867 5.106830 GGTAAACACACATGGTAACTACTGC 60.107 44.000 0.00 0.00 37.61 4.40
867 868 4.351874 AACACACATGGTAACTACTGCT 57.648 40.909 0.00 0.00 37.61 4.24
868 869 4.351874 ACACACATGGTAACTACTGCTT 57.648 40.909 0.00 0.00 37.61 3.91
869 870 4.714632 ACACACATGGTAACTACTGCTTT 58.285 39.130 0.00 0.00 37.61 3.51
870 871 4.515191 ACACACATGGTAACTACTGCTTTG 59.485 41.667 0.00 0.00 37.61 2.77
871 872 4.754618 CACACATGGTAACTACTGCTTTGA 59.245 41.667 0.00 0.00 37.61 2.69
872 873 4.755123 ACACATGGTAACTACTGCTTTGAC 59.245 41.667 0.00 0.00 37.61 3.18
873 874 4.154195 CACATGGTAACTACTGCTTTGACC 59.846 45.833 0.00 0.00 37.61 4.02
874 875 4.202419 ACATGGTAACTACTGCTTTGACCA 60.202 41.667 0.00 0.00 39.66 4.02
875 876 4.634012 TGGTAACTACTGCTTTGACCAT 57.366 40.909 0.00 0.00 30.67 3.55
876 877 4.980573 TGGTAACTACTGCTTTGACCATT 58.019 39.130 0.00 0.00 30.67 3.16
877 878 5.381757 TGGTAACTACTGCTTTGACCATTT 58.618 37.500 0.00 0.00 30.67 2.32
879 880 5.240844 GGTAACTACTGCTTTGACCATTTGT 59.759 40.000 0.00 0.00 0.00 2.83
880 881 4.836125 ACTACTGCTTTGACCATTTGTG 57.164 40.909 0.00 0.00 0.00 3.33
881 882 3.569701 ACTACTGCTTTGACCATTTGTGG 59.430 43.478 0.00 0.00 0.00 4.17
882 883 1.069049 ACTGCTTTGACCATTTGTGGC 59.931 47.619 0.00 0.00 0.00 5.01
883 884 1.068895 CTGCTTTGACCATTTGTGGCA 59.931 47.619 0.00 0.00 0.00 4.92
884 885 1.483827 TGCTTTGACCATTTGTGGCAA 59.516 42.857 0.00 0.00 0.00 4.52
885 886 2.137523 GCTTTGACCATTTGTGGCAAG 58.862 47.619 0.00 0.00 0.00 4.01
887 888 3.243704 GCTTTGACCATTTGTGGCAAGTA 60.244 43.478 0.00 0.00 0.00 2.24
888 889 4.549458 CTTTGACCATTTGTGGCAAGTAG 58.451 43.478 0.00 0.00 0.00 2.57
891 892 4.720046 TGACCATTTGTGGCAAGTAGTTA 58.280 39.130 0.00 0.00 0.00 2.24
893 894 5.772672 TGACCATTTGTGGCAAGTAGTTAAT 59.227 36.000 0.00 0.00 0.00 1.40
894 895 6.072175 TGACCATTTGTGGCAAGTAGTTAATC 60.072 38.462 0.00 0.00 0.00 1.75
896 897 6.092748 CCATTTGTGGCAAGTAGTTAATCAC 58.907 40.000 0.00 0.00 0.00 3.06
898 899 5.682943 TTGTGGCAAGTAGTTAATCACAC 57.317 39.130 10.26 0.00 34.08 3.82
900 901 4.513692 TGTGGCAAGTAGTTAATCACACAC 59.486 41.667 0.00 0.00 32.12 3.82
901 902 3.743911 TGGCAAGTAGTTAATCACACACG 59.256 43.478 0.00 0.00 0.00 4.49
902 903 3.124636 GGCAAGTAGTTAATCACACACGG 59.875 47.826 0.00 0.00 0.00 4.94
939 1877 1.635663 CTCGCTGGGTTTACGCCTTG 61.636 60.000 0.00 0.00 0.00 3.61
940 1878 1.964373 CGCTGGGTTTACGCCTTGT 60.964 57.895 0.00 0.00 0.00 3.16
941 1879 1.512156 CGCTGGGTTTACGCCTTGTT 61.512 55.000 0.00 0.00 0.00 2.83
942 1880 0.671796 GCTGGGTTTACGCCTTGTTT 59.328 50.000 0.00 0.00 0.00 2.83
943 1881 1.881324 GCTGGGTTTACGCCTTGTTTA 59.119 47.619 0.00 0.00 0.00 2.01
944 1882 2.095415 GCTGGGTTTACGCCTTGTTTAG 60.095 50.000 0.00 0.00 0.00 1.85
945 1883 3.404899 CTGGGTTTACGCCTTGTTTAGA 58.595 45.455 0.00 0.00 0.00 2.10
957 1895 7.331791 ACGCCTTGTTTAGATTAGATCTCTTT 58.668 34.615 0.00 0.00 40.76 2.52
1146 2084 2.401766 CCACAAGCTCATCGTGGGC 61.402 63.158 13.91 2.11 46.33 5.36
1344 2282 4.681978 GACGCCAACCGCCTGAGT 62.682 66.667 0.00 0.00 41.76 3.41
1359 2297 1.291272 GAGTAACGACCACGGCCTT 59.709 57.895 0.00 0.00 44.46 4.35
1616 2554 2.752121 CGACTACTGAGATGCATGCAT 58.248 47.619 32.66 32.66 39.69 3.96
1656 2594 2.100252 GCTGTCCTGCAATACCTACGTA 59.900 50.000 0.00 0.00 0.00 3.57
1657 2595 3.703420 CTGTCCTGCAATACCTACGTAC 58.297 50.000 0.00 0.00 0.00 3.67
1658 2596 3.359033 TGTCCTGCAATACCTACGTACT 58.641 45.455 0.00 0.00 0.00 2.73
1659 2597 4.525996 TGTCCTGCAATACCTACGTACTA 58.474 43.478 0.00 0.00 0.00 1.82
1660 2598 4.577693 TGTCCTGCAATACCTACGTACTAG 59.422 45.833 0.00 0.00 0.00 2.57
1717 2671 5.292765 TCGATCTGTAATGAAGAATCAGCC 58.707 41.667 0.00 0.00 39.39 4.85
1744 2698 3.236632 TGGTGATGATGAGTTGTCGAG 57.763 47.619 0.00 0.00 0.00 4.04
1755 2709 4.369182 TGAGTTGTCGAGGACTTTTCTTC 58.631 43.478 2.47 0.00 33.15 2.87
1769 2723 7.174080 AGGACTTTTCTTCTAAAGAGTTGATGC 59.826 37.037 0.00 0.00 39.03 3.91
1786 2740 2.742116 GCCCATGGCGACTCCCTTA 61.742 63.158 6.09 0.00 39.62 2.69
1793 2747 0.318762 GGCGACTCCCTTATGCTAGG 59.681 60.000 0.00 0.00 34.92 3.02
1889 2843 4.636206 GCAATTCTTCGGTCCTCAACTATT 59.364 41.667 0.00 0.00 0.00 1.73
1904 2858 8.788806 TCCTCAACTATTATCTCTTTCTCGATC 58.211 37.037 0.00 0.00 0.00 3.69
2122 3077 0.958382 GGTCGTGCCCTGCATGTAAA 60.958 55.000 8.04 0.00 44.84 2.01
2129 3084 1.410083 GCCCTGCATGTAAAGATCCCA 60.410 52.381 0.00 0.00 0.00 4.37
2134 3089 5.132502 CCTGCATGTAAAGATCCCAATGTA 58.867 41.667 0.00 0.00 0.00 2.29
2147 3102 5.638530 TCCCAATGTATATGCACCTGTAA 57.361 39.130 0.00 0.00 0.00 2.41
2148 3103 5.373222 TCCCAATGTATATGCACCTGTAAC 58.627 41.667 0.00 0.00 0.00 2.50
2149 3104 4.518970 CCCAATGTATATGCACCTGTAACC 59.481 45.833 0.00 0.00 0.00 2.85
2150 3105 5.129634 CCAATGTATATGCACCTGTAACCA 58.870 41.667 0.00 0.00 0.00 3.67
2151 3106 5.239306 CCAATGTATATGCACCTGTAACCAG 59.761 44.000 0.00 0.00 38.50 4.00
2152 3107 3.804036 TGTATATGCACCTGTAACCAGC 58.196 45.455 0.00 0.00 37.38 4.85
2177 3137 5.017294 TGGCAATACACACGAGATTCATA 57.983 39.130 0.00 0.00 0.00 2.15
2231 3191 1.379977 CCTCTACCTCTCCCACGCA 60.380 63.158 0.00 0.00 0.00 5.24
2232 3192 1.668101 CCTCTACCTCTCCCACGCAC 61.668 65.000 0.00 0.00 0.00 5.34
2292 3269 0.249120 CCTATTGACGTGTGCCCTCA 59.751 55.000 0.00 0.00 0.00 3.86
2316 3293 0.526662 CTGGCTACGGACGAGAACTT 59.473 55.000 0.00 0.00 0.00 2.66
2340 3317 2.182030 CGTCGGTCTCCCTCTTGC 59.818 66.667 0.00 0.00 0.00 4.01
2341 3318 2.579738 GTCGGTCTCCCTCTTGCC 59.420 66.667 0.00 0.00 0.00 4.52
2344 3321 2.726351 CGGTCTCCCTCTTGCCTCC 61.726 68.421 0.00 0.00 0.00 4.30
2443 3428 3.551496 TTCAAGCTGGCCCTGGACG 62.551 63.158 0.00 0.00 0.00 4.79
2508 3493 0.941463 CGTGCTATGATGCGGAGGAC 60.941 60.000 0.00 0.00 35.36 3.85
2526 3511 4.796231 CACGTCCGGGAAGCCTCG 62.796 72.222 10.02 6.18 0.00 4.63
2584 3569 4.023707 CAGGCTTTTGGTCACTTGAGTTAG 60.024 45.833 0.00 0.00 0.00 2.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
157 158 4.142049 CGCATCTCTATTCCCCTCCTTATC 60.142 50.000 0.00 0.00 0.00 1.75
185 186 0.464036 CTCATCCCGAACGAATCCCA 59.536 55.000 0.00 0.00 0.00 4.37
296 297 2.799540 GATTTCTGACGTCCCGCGC 61.800 63.158 14.12 0.00 46.11 6.86
349 350 0.938713 TGTGGGCGTTAGTGTTTTCG 59.061 50.000 0.00 0.00 0.00 3.46
350 351 1.333435 CGTGTGGGCGTTAGTGTTTTC 60.333 52.381 0.00 0.00 0.00 2.29
351 352 0.658897 CGTGTGGGCGTTAGTGTTTT 59.341 50.000 0.00 0.00 0.00 2.43
352 353 0.462403 ACGTGTGGGCGTTAGTGTTT 60.462 50.000 0.00 0.00 43.04 2.83
353 354 1.144496 ACGTGTGGGCGTTAGTGTT 59.856 52.632 0.00 0.00 43.04 3.32
354 355 1.593209 CACGTGTGGGCGTTAGTGT 60.593 57.895 7.58 0.00 43.83 3.55
355 356 0.318869 TACACGTGTGGGCGTTAGTG 60.319 55.000 30.83 0.00 43.83 2.74
356 357 0.038892 CTACACGTGTGGGCGTTAGT 60.039 55.000 30.83 2.09 43.83 2.24
357 358 0.734942 CCTACACGTGTGGGCGTTAG 60.735 60.000 34.11 19.73 43.83 2.34
358 359 1.289694 CCTACACGTGTGGGCGTTA 59.710 57.895 34.11 11.35 43.83 3.18
359 360 2.029964 CCTACACGTGTGGGCGTT 59.970 61.111 34.11 7.99 43.83 4.84
369 370 0.037975 AGTTGGGTAACGCCTACACG 60.038 55.000 0.00 0.00 41.71 4.49
370 371 1.718396 GAGTTGGGTAACGCCTACAC 58.282 55.000 0.00 0.00 41.71 2.90
371 372 0.244450 CGAGTTGGGTAACGCCTACA 59.756 55.000 0.00 0.00 41.71 2.74
372 373 1.080435 GCGAGTTGGGTAACGCCTAC 61.080 60.000 0.00 0.00 44.27 3.18
373 374 1.216178 GCGAGTTGGGTAACGCCTA 59.784 57.895 0.00 0.00 44.27 3.93
374 375 2.047560 GCGAGTTGGGTAACGCCT 60.048 61.111 0.00 0.00 44.27 5.52
377 378 2.030958 GTGGGCGAGTTGGGTAACG 61.031 63.158 0.00 0.00 41.71 3.18
378 379 1.071814 TGTGGGCGAGTTGGGTAAC 59.928 57.895 0.00 0.00 37.06 2.50
379 380 1.071814 GTGTGGGCGAGTTGGGTAA 59.928 57.895 0.00 0.00 0.00 2.85
380 381 2.745037 GTGTGGGCGAGTTGGGTA 59.255 61.111 0.00 0.00 0.00 3.69
381 382 4.619227 CGTGTGGGCGAGTTGGGT 62.619 66.667 0.00 0.00 0.00 4.51
382 383 4.619227 ACGTGTGGGCGAGTTGGG 62.619 66.667 0.00 0.00 35.59 4.12
383 384 3.041940 GACGTGTGGGCGAGTTGG 61.042 66.667 0.00 0.00 35.59 3.77
384 385 2.029073 AGACGTGTGGGCGAGTTG 59.971 61.111 0.00 0.00 35.59 3.16
385 386 2.029073 CAGACGTGTGGGCGAGTT 59.971 61.111 4.46 0.00 35.59 3.01
386 387 3.991051 CCAGACGTGTGGGCGAGT 61.991 66.667 23.61 0.00 33.46 4.18
387 388 2.890847 GATCCAGACGTGTGGGCGAG 62.891 65.000 29.47 5.74 38.26 5.03
388 389 2.994995 ATCCAGACGTGTGGGCGA 60.995 61.111 29.47 12.79 38.26 5.54
389 390 2.509336 GATCCAGACGTGTGGGCG 60.509 66.667 29.47 6.50 38.26 6.13
390 391 2.509336 CGATCCAGACGTGTGGGC 60.509 66.667 29.47 20.50 38.26 5.36
391 392 1.153823 GACGATCCAGACGTGTGGG 60.154 63.158 29.47 17.05 43.97 4.61
392 393 1.514228 CGACGATCCAGACGTGTGG 60.514 63.158 25.19 25.19 43.97 4.17
393 394 0.386858 AACGACGATCCAGACGTGTG 60.387 55.000 5.57 5.57 43.97 3.82
394 395 0.109873 GAACGACGATCCAGACGTGT 60.110 55.000 0.00 0.00 43.97 4.49
395 396 0.109919 TGAACGACGATCCAGACGTG 60.110 55.000 0.00 0.00 43.97 4.49
396 397 0.594602 TTGAACGACGATCCAGACGT 59.405 50.000 0.00 0.00 46.58 4.34
397 398 1.260206 CTTGAACGACGATCCAGACG 58.740 55.000 0.00 0.00 35.60 4.18
398 399 1.067776 ACCTTGAACGACGATCCAGAC 60.068 52.381 0.00 0.00 0.00 3.51
399 400 1.067846 CACCTTGAACGACGATCCAGA 60.068 52.381 0.00 0.00 0.00 3.86
400 401 1.067846 TCACCTTGAACGACGATCCAG 60.068 52.381 0.00 0.00 0.00 3.86
401 402 0.963225 TCACCTTGAACGACGATCCA 59.037 50.000 0.00 0.00 0.00 3.41
402 403 2.074547 TTCACCTTGAACGACGATCC 57.925 50.000 0.00 0.00 30.26 3.36
403 404 4.394795 CAAATTCACCTTGAACGACGATC 58.605 43.478 0.00 0.00 39.45 3.69
404 405 3.188460 CCAAATTCACCTTGAACGACGAT 59.812 43.478 0.00 0.00 39.45 3.73
405 406 2.546368 CCAAATTCACCTTGAACGACGA 59.454 45.455 0.00 0.00 39.45 4.20
406 407 2.289547 ACCAAATTCACCTTGAACGACG 59.710 45.455 0.00 0.00 39.45 5.12
407 408 3.066203 ACACCAAATTCACCTTGAACGAC 59.934 43.478 0.00 0.00 39.45 4.34
408 409 3.066064 CACACCAAATTCACCTTGAACGA 59.934 43.478 0.00 0.00 39.45 3.85
409 410 3.371168 CACACCAAATTCACCTTGAACG 58.629 45.455 0.00 0.00 39.45 3.95
410 411 3.123050 GCACACCAAATTCACCTTGAAC 58.877 45.455 0.00 0.00 39.45 3.18
411 412 2.102252 GGCACACCAAATTCACCTTGAA 59.898 45.455 0.00 0.00 36.98 2.69
412 413 1.686052 GGCACACCAAATTCACCTTGA 59.314 47.619 0.00 0.00 35.26 3.02
413 414 1.411977 TGGCACACCAAATTCACCTTG 59.588 47.619 0.00 0.00 45.37 3.61
414 415 1.786937 TGGCACACCAAATTCACCTT 58.213 45.000 0.00 0.00 45.37 3.50
415 416 3.529948 TGGCACACCAAATTCACCT 57.470 47.368 0.00 0.00 45.37 4.00
427 428 3.687102 CCCGTCCTACGTGGCACA 61.687 66.667 19.09 0.00 40.58 4.57
428 429 4.446413 CCCCGTCCTACGTGGCAC 62.446 72.222 7.79 7.79 40.58 5.01
431 432 4.143333 CAGCCCCGTCCTACGTGG 62.143 72.222 0.00 0.00 42.14 4.94
432 433 4.143333 CCAGCCCCGTCCTACGTG 62.143 72.222 0.00 0.00 40.58 4.49
433 434 4.691359 ACCAGCCCCGTCCTACGT 62.691 66.667 0.00 0.00 40.58 3.57
434 435 4.143333 CACCAGCCCCGTCCTACG 62.143 72.222 0.00 0.00 42.11 3.51
435 436 3.001406 ACACCAGCCCCGTCCTAC 61.001 66.667 0.00 0.00 0.00 3.18
436 437 3.000819 CACACCAGCCCCGTCCTA 61.001 66.667 0.00 0.00 0.00 2.94
445 446 3.964875 CAACGCCCACACACCAGC 61.965 66.667 0.00 0.00 0.00 4.85
446 447 1.785041 CTTCAACGCCCACACACCAG 61.785 60.000 0.00 0.00 0.00 4.00
447 448 1.821759 CTTCAACGCCCACACACCA 60.822 57.895 0.00 0.00 0.00 4.17
448 449 1.507141 CTCTTCAACGCCCACACACC 61.507 60.000 0.00 0.00 0.00 4.16
449 450 0.814010 ACTCTTCAACGCCCACACAC 60.814 55.000 0.00 0.00 0.00 3.82
450 451 0.107410 AACTCTTCAACGCCCACACA 60.107 50.000 0.00 0.00 0.00 3.72
451 452 1.021968 AAACTCTTCAACGCCCACAC 58.978 50.000 0.00 0.00 0.00 3.82
452 453 1.021202 CAAACTCTTCAACGCCCACA 58.979 50.000 0.00 0.00 0.00 4.17
453 454 0.317854 GCAAACTCTTCAACGCCCAC 60.318 55.000 0.00 0.00 0.00 4.61
454 455 1.452145 GGCAAACTCTTCAACGCCCA 61.452 55.000 0.00 0.00 33.31 5.36
455 456 1.285950 GGCAAACTCTTCAACGCCC 59.714 57.895 0.00 0.00 33.31 6.13
456 457 1.285950 GGGCAAACTCTTCAACGCC 59.714 57.895 0.00 0.00 38.85 5.68
457 458 0.317854 GTGGGCAAACTCTTCAACGC 60.318 55.000 0.00 0.00 0.00 4.84
458 459 1.021202 TGTGGGCAAACTCTTCAACG 58.979 50.000 0.00 0.00 0.00 4.10
459 460 1.268539 CGTGTGGGCAAACTCTTCAAC 60.269 52.381 0.00 0.00 0.00 3.18
460 461 1.021202 CGTGTGGGCAAACTCTTCAA 58.979 50.000 0.00 0.00 0.00 2.69
461 462 0.107410 ACGTGTGGGCAAACTCTTCA 60.107 50.000 0.00 0.00 0.00 3.02
462 463 0.586802 GACGTGTGGGCAAACTCTTC 59.413 55.000 0.00 0.00 0.00 2.87
473 474 4.602259 AGTGGTGCGGACGTGTGG 62.602 66.667 0.00 0.00 0.00 4.17
474 475 3.036084 GAGTGGTGCGGACGTGTG 61.036 66.667 0.00 0.00 0.00 3.82
475 476 3.224324 AGAGTGGTGCGGACGTGT 61.224 61.111 0.00 0.00 0.00 4.49
476 477 2.734723 CAGAGTGGTGCGGACGTG 60.735 66.667 0.00 0.00 0.00 4.49
477 478 2.306255 AAACAGAGTGGTGCGGACGT 62.306 55.000 0.00 0.00 0.00 4.34
478 479 1.594293 AAACAGAGTGGTGCGGACG 60.594 57.895 0.00 0.00 0.00 4.79
479 480 1.941812 CAAACAGAGTGGTGCGGAC 59.058 57.895 0.00 0.00 0.00 4.79
481 482 2.639286 GCAAACAGAGTGGTGCGG 59.361 61.111 0.00 0.00 0.00 5.69
482 483 2.186160 TGGCAAACAGAGTGGTGCG 61.186 57.895 0.00 0.00 34.56 5.34
492 493 2.412525 CAACGCAGCTGGCAAACA 59.587 55.556 17.12 0.00 45.17 2.83
493 494 1.945662 CACAACGCAGCTGGCAAAC 60.946 57.895 17.12 0.00 45.17 2.93
494 495 1.943116 AACACAACGCAGCTGGCAAA 61.943 50.000 17.12 0.00 45.17 3.68
496 497 2.828095 AACACAACGCAGCTGGCA 60.828 55.556 17.12 0.00 45.17 4.92
497 498 2.353839 CAACACAACGCAGCTGGC 60.354 61.111 17.12 6.97 39.90 4.85
500 501 3.952675 CGCCAACACAACGCAGCT 61.953 61.111 0.00 0.00 0.00 4.24
501 502 3.462333 TTCGCCAACACAACGCAGC 62.462 57.895 0.00 0.00 0.00 5.25
502 503 1.654137 GTTCGCCAACACAACGCAG 60.654 57.895 0.00 0.00 32.14 5.18
503 504 2.109739 AGTTCGCCAACACAACGCA 61.110 52.632 0.00 0.00 34.60 5.24
505 506 1.654137 GCAGTTCGCCAACACAACG 60.654 57.895 0.00 0.00 34.60 4.10
506 507 0.100503 AAGCAGTTCGCCAACACAAC 59.899 50.000 0.00 0.00 44.04 3.32
507 508 0.814457 AAAGCAGTTCGCCAACACAA 59.186 45.000 0.00 0.00 44.04 3.33
509 510 1.587946 CAAAAAGCAGTTCGCCAACAC 59.412 47.619 0.00 0.00 44.04 3.32
510 511 1.919918 CAAAAAGCAGTTCGCCAACA 58.080 45.000 0.00 0.00 44.04 3.33
511 512 0.576798 GCAAAAAGCAGTTCGCCAAC 59.423 50.000 0.00 0.00 44.04 3.77
512 513 2.970576 GCAAAAAGCAGTTCGCCAA 58.029 47.368 0.00 0.00 44.04 4.52
513 514 4.728058 GCAAAAAGCAGTTCGCCA 57.272 50.000 0.00 0.00 44.04 5.69
522 523 1.595109 GGCTGTGTGGGCAAAAAGC 60.595 57.895 0.00 0.00 44.65 3.51
523 524 0.530431 GTGGCTGTGTGGGCAAAAAG 60.530 55.000 0.00 0.00 43.18 2.27
524 525 1.519719 GTGGCTGTGTGGGCAAAAA 59.480 52.632 0.00 0.00 43.18 1.94
527 528 4.134785 TGGTGGCTGTGTGGGCAA 62.135 61.111 0.00 0.00 43.18 4.52
530 531 2.469465 CTAGGTGGTGGCTGTGTGGG 62.469 65.000 0.00 0.00 0.00 4.61
532 533 1.003355 CCTAGGTGGTGGCTGTGTG 60.003 63.158 0.00 0.00 0.00 3.82
542 543 2.586079 CGCGCATGACCTAGGTGG 60.586 66.667 22.10 9.84 42.93 4.61
543 544 2.167219 CACGCGCATGACCTAGGTG 61.167 63.158 22.10 6.29 0.00 4.00
544 545 2.184322 CACGCGCATGACCTAGGT 59.816 61.111 16.26 16.26 0.00 3.08
545 546 2.167219 CACACGCGCATGACCTAGG 61.167 63.158 11.87 7.41 0.00 3.02
546 547 2.167219 CCACACGCGCATGACCTAG 61.167 63.158 11.87 0.00 0.00 3.02
547 548 2.125713 CCACACGCGCATGACCTA 60.126 61.111 11.87 0.00 0.00 3.08
558 559 2.058829 AAAAGCAGTTCGCCCACACG 62.059 55.000 0.00 0.00 44.04 4.49
559 560 0.317854 GAAAAGCAGTTCGCCCACAC 60.318 55.000 0.00 0.00 44.04 3.82
560 561 1.781025 CGAAAAGCAGTTCGCCCACA 61.781 55.000 8.58 0.00 43.38 4.17
561 562 1.082104 CGAAAAGCAGTTCGCCCAC 60.082 57.895 8.58 0.00 43.38 4.61
572 573 2.251371 GTCGTGTGGGCGAAAAGC 59.749 61.111 0.00 0.00 42.82 3.51
573 574 1.157870 AGTGTCGTGTGGGCGAAAAG 61.158 55.000 0.00 0.00 42.82 2.27
577 578 3.986006 GGAGTGTCGTGTGGGCGA 61.986 66.667 0.00 0.00 38.68 5.54
579 580 1.080025 GTAGGAGTGTCGTGTGGGC 60.080 63.158 0.00 0.00 0.00 5.36
581 582 0.966920 AAGGTAGGAGTGTCGTGTGG 59.033 55.000 0.00 0.00 0.00 4.17
582 583 1.340248 ACAAGGTAGGAGTGTCGTGTG 59.660 52.381 0.00 0.00 0.00 3.82
583 584 1.340248 CACAAGGTAGGAGTGTCGTGT 59.660 52.381 0.00 0.00 0.00 4.49
585 586 0.966920 CCACAAGGTAGGAGTGTCGT 59.033 55.000 0.00 0.00 0.00 4.34
586 587 1.254026 TCCACAAGGTAGGAGTGTCG 58.746 55.000 0.00 0.00 35.89 4.35
587 588 2.093447 CCATCCACAAGGTAGGAGTGTC 60.093 54.545 0.00 0.00 37.34 3.67
588 589 1.909302 CCATCCACAAGGTAGGAGTGT 59.091 52.381 0.00 0.00 37.34 3.55
589 590 1.407437 GCCATCCACAAGGTAGGAGTG 60.407 57.143 0.00 0.00 37.34 3.51
591 592 0.911769 TGCCATCCACAAGGTAGGAG 59.088 55.000 0.00 0.00 37.34 3.69
592 593 1.004277 GTTGCCATCCACAAGGTAGGA 59.996 52.381 0.00 0.00 38.50 2.94
593 594 1.004745 AGTTGCCATCCACAAGGTAGG 59.995 52.381 0.00 0.00 35.89 3.18
595 596 1.886222 GCAGTTGCCATCCACAAGGTA 60.886 52.381 0.00 0.00 33.47 3.08
596 597 1.181098 GCAGTTGCCATCCACAAGGT 61.181 55.000 0.00 0.00 33.47 3.50
598 599 0.242825 CTGCAGTTGCCATCCACAAG 59.757 55.000 5.25 0.00 41.18 3.16
599 600 0.467844 ACTGCAGTTGCCATCCACAA 60.468 50.000 15.25 0.00 41.18 3.33
603 604 0.447801 CGTAACTGCAGTTGCCATCC 59.552 55.000 36.50 17.91 41.18 3.51
604 605 0.179189 GCGTAACTGCAGTTGCCATC 60.179 55.000 36.50 22.68 41.18 3.51
606 607 2.603247 CGCGTAACTGCAGTTGCCA 61.603 57.895 36.50 18.43 41.18 4.92
608 609 0.165944 ATTCGCGTAACTGCAGTTGC 59.834 50.000 36.50 33.57 38.90 4.17
609 610 1.194547 ACATTCGCGTAACTGCAGTTG 59.805 47.619 36.50 24.02 38.90 3.16
611 612 0.790207 CACATTCGCGTAACTGCAGT 59.210 50.000 15.25 15.25 34.15 4.40
613 614 1.906994 GCCACATTCGCGTAACTGCA 61.907 55.000 5.77 0.00 34.15 4.41
614 615 1.226018 GCCACATTCGCGTAACTGC 60.226 57.895 5.77 0.00 0.00 4.40
615 616 0.515127 TTGCCACATTCGCGTAACTG 59.485 50.000 5.77 2.12 0.00 3.16
617 618 0.515564 AGTTGCCACATTCGCGTAAC 59.484 50.000 5.77 0.62 0.00 2.50
618 619 0.793861 GAGTTGCCACATTCGCGTAA 59.206 50.000 5.77 0.00 0.00 3.18
619 620 1.348538 CGAGTTGCCACATTCGCGTA 61.349 55.000 5.77 0.00 0.00 4.42
621 622 2.096406 CGAGTTGCCACATTCGCG 59.904 61.111 0.00 0.00 0.00 5.87
622 623 1.573829 TTCCGAGTTGCCACATTCGC 61.574 55.000 0.00 0.00 0.00 4.70
626 627 0.179032 TGTGTTCCGAGTTGCCACAT 60.179 50.000 0.00 0.00 31.55 3.21
627 628 1.092921 GTGTGTTCCGAGTTGCCACA 61.093 55.000 0.00 0.00 33.92 4.17
628 629 1.092921 TGTGTGTTCCGAGTTGCCAC 61.093 55.000 0.00 0.00 0.00 5.01
629 630 1.092921 GTGTGTGTTCCGAGTTGCCA 61.093 55.000 0.00 0.00 0.00 4.92
631 632 0.944386 ATGTGTGTGTTCCGAGTTGC 59.056 50.000 0.00 0.00 0.00 4.17
632 633 2.032894 GTCATGTGTGTGTTCCGAGTTG 60.033 50.000 0.00 0.00 0.00 3.16
635 636 1.864565 TGTCATGTGTGTGTTCCGAG 58.135 50.000 0.00 0.00 0.00 4.63
636 637 1.937223 GTTGTCATGTGTGTGTTCCGA 59.063 47.619 0.00 0.00 0.00 4.55
638 639 2.682856 ACAGTTGTCATGTGTGTGTTCC 59.317 45.455 0.00 0.00 0.00 3.62
639 640 5.478233 TTACAGTTGTCATGTGTGTGTTC 57.522 39.130 0.00 0.00 32.02 3.18
641 642 5.822519 AGAATTACAGTTGTCATGTGTGTGT 59.177 36.000 0.00 0.00 32.02 3.72
642 643 6.304356 AGAATTACAGTTGTCATGTGTGTG 57.696 37.500 0.00 0.00 32.02 3.82
643 644 6.942532 AAGAATTACAGTTGTCATGTGTGT 57.057 33.333 0.00 0.00 32.02 3.72
644 645 6.142798 GCAAAGAATTACAGTTGTCATGTGTG 59.857 38.462 0.00 0.00 32.02 3.82
646 647 6.441274 AGCAAAGAATTACAGTTGTCATGTG 58.559 36.000 0.00 0.00 32.02 3.21
647 648 6.639632 AGCAAAGAATTACAGTTGTCATGT 57.360 33.333 0.00 0.00 34.62 3.21
648 649 7.535258 GTGTAGCAAAGAATTACAGTTGTCATG 59.465 37.037 0.00 0.00 0.00 3.07
649 650 7.571244 CGTGTAGCAAAGAATTACAGTTGTCAT 60.571 37.037 0.00 0.00 0.00 3.06
651 652 6.071463 CGTGTAGCAAAGAATTACAGTTGTC 58.929 40.000 0.00 0.00 0.00 3.18
652 653 5.049680 CCGTGTAGCAAAGAATTACAGTTGT 60.050 40.000 0.00 0.00 0.00 3.32
653 654 5.382303 CCGTGTAGCAAAGAATTACAGTTG 58.618 41.667 0.00 0.00 0.00 3.16
654 655 4.083484 GCCGTGTAGCAAAGAATTACAGTT 60.083 41.667 0.00 0.00 0.00 3.16
655 656 3.435671 GCCGTGTAGCAAAGAATTACAGT 59.564 43.478 0.00 0.00 0.00 3.55
656 657 3.435327 TGCCGTGTAGCAAAGAATTACAG 59.565 43.478 0.00 0.00 40.56 2.74
657 658 3.403968 TGCCGTGTAGCAAAGAATTACA 58.596 40.909 0.00 0.00 40.56 2.41
667 668 1.960763 CTGCAGTTGCCGTGTAGCA 60.961 57.895 5.25 0.00 42.17 3.49
668 669 1.507141 AACTGCAGTTGCCGTGTAGC 61.507 55.000 30.66 0.00 38.49 3.58
669 670 1.459592 GTAACTGCAGTTGCCGTGTAG 59.540 52.381 36.50 0.67 38.49 2.74
670 671 1.504359 GTAACTGCAGTTGCCGTGTA 58.496 50.000 36.50 16.24 38.49 2.90
671 672 1.495584 CGTAACTGCAGTTGCCGTGT 61.496 55.000 36.50 15.57 38.49 4.49
672 673 1.204062 CGTAACTGCAGTTGCCGTG 59.796 57.895 36.50 21.14 38.49 4.94
673 674 2.604174 GCGTAACTGCAGTTGCCGT 61.604 57.895 36.50 17.03 40.20 5.68
675 676 1.837538 TTCGCGTAACTGCAGTTGCC 61.838 55.000 36.50 26.63 41.18 4.52
676 677 0.721483 GTTCGCGTAACTGCAGTTGC 60.721 55.000 36.50 33.57 38.90 4.17
677 678 0.448861 CGTTCGCGTAACTGCAGTTG 60.449 55.000 36.50 24.02 38.90 3.16
678 679 1.850640 CGTTCGCGTAACTGCAGTT 59.149 52.632 32.97 32.97 41.73 3.16
679 680 3.534160 CGTTCGCGTAACTGCAGT 58.466 55.556 15.25 15.25 35.81 4.40
691 692 0.782384 GTACTGAGTTGCCACGTTCG 59.218 55.000 0.00 0.00 0.00 3.95
692 693 1.525619 GTGTACTGAGTTGCCACGTTC 59.474 52.381 0.00 0.00 0.00 3.95
694 695 0.462375 TGTGTACTGAGTTGCCACGT 59.538 50.000 0.00 0.00 0.00 4.49
695 696 0.859232 GTGTGTACTGAGTTGCCACG 59.141 55.000 0.00 0.00 0.00 4.94
696 697 1.597663 GTGTGTGTACTGAGTTGCCAC 59.402 52.381 0.00 0.00 0.00 5.01
698 699 1.948104 TGTGTGTGTACTGAGTTGCC 58.052 50.000 0.00 0.00 0.00 4.52
699 700 2.224079 CCATGTGTGTGTACTGAGTTGC 59.776 50.000 0.00 0.00 0.00 4.17
700 701 2.224079 GCCATGTGTGTGTACTGAGTTG 59.776 50.000 0.00 0.00 0.00 3.16
705 706 3.004629 ACAATTGCCATGTGTGTGTACTG 59.995 43.478 5.05 0.00 0.00 2.74
706 707 3.004629 CACAATTGCCATGTGTGTGTACT 59.995 43.478 5.05 0.00 42.48 2.73
707 708 3.004210 TCACAATTGCCATGTGTGTGTAC 59.996 43.478 5.05 0.00 46.42 2.90
708 709 3.217626 TCACAATTGCCATGTGTGTGTA 58.782 40.909 5.05 0.00 46.42 2.90
710 711 2.797074 TCACAATTGCCATGTGTGTG 57.203 45.000 5.05 8.53 46.42 3.82
716 717 4.593597 GCAAAGAATCACAATTGCCATG 57.406 40.909 5.05 0.00 41.67 3.66
720 721 5.290158 CCATGTAGCAAAGAATCACAATTGC 59.710 40.000 5.05 1.31 46.43 3.56
721 722 5.290158 GCCATGTAGCAAAGAATCACAATTG 59.710 40.000 3.24 3.24 0.00 2.32
722 723 5.047164 TGCCATGTAGCAAAGAATCACAATT 60.047 36.000 0.00 0.00 40.56 2.32
723 724 4.463539 TGCCATGTAGCAAAGAATCACAAT 59.536 37.500 0.00 0.00 40.56 2.71
724 725 3.825585 TGCCATGTAGCAAAGAATCACAA 59.174 39.130 0.00 0.00 40.56 3.33
725 726 3.419943 TGCCATGTAGCAAAGAATCACA 58.580 40.909 0.00 0.00 40.56 3.58
735 736 0.250858 ACTGCAGTTGCCATGTAGCA 60.251 50.000 15.25 0.00 42.17 3.49
736 737 0.883833 AACTGCAGTTGCCATGTAGC 59.116 50.000 30.66 0.00 41.18 3.58
748 749 3.403057 ACGTACGCGCAACTGCAG 61.403 61.111 16.72 13.48 42.83 4.41
749 750 3.697444 CACGTACGCGCAACTGCA 61.697 61.111 16.72 0.00 42.83 4.41
750 751 4.424430 CCACGTACGCGCAACTGC 62.424 66.667 16.72 0.00 42.83 4.40
751 752 4.424430 GCCACGTACGCGCAACTG 62.424 66.667 16.72 4.65 42.83 3.16
752 753 4.953868 TGCCACGTACGCGCAACT 62.954 61.111 23.60 0.00 42.83 3.16
753 754 4.003011 TTGCCACGTACGCGCAAC 62.003 61.111 29.09 11.90 42.83 4.17
757 758 3.773630 CTGGTTGCCACGTACGCG 61.774 66.667 16.72 3.53 44.93 6.01
759 760 1.999048 TTATCTGGTTGCCACGTACG 58.001 50.000 15.01 15.01 0.00 3.67
760 761 3.068560 TGTTTATCTGGTTGCCACGTAC 58.931 45.455 0.00 0.00 0.00 3.67
762 763 1.877443 GTGTTTATCTGGTTGCCACGT 59.123 47.619 0.00 0.00 0.00 4.49
763 764 1.876799 TGTGTTTATCTGGTTGCCACG 59.123 47.619 0.00 0.00 0.00 4.94
764 765 2.621055 TGTGTGTTTATCTGGTTGCCAC 59.379 45.455 0.00 0.00 0.00 5.01
765 766 2.937519 TGTGTGTTTATCTGGTTGCCA 58.062 42.857 0.00 0.00 0.00 4.92
766 767 3.367292 CCATGTGTGTTTATCTGGTTGCC 60.367 47.826 0.00 0.00 0.00 4.52
767 768 3.505680 TCCATGTGTGTTTATCTGGTTGC 59.494 43.478 0.00 0.00 0.00 4.17
768 769 4.518590 TGTCCATGTGTGTTTATCTGGTTG 59.481 41.667 0.00 0.00 0.00 3.77
772 773 4.756642 ACAGTGTCCATGTGTGTTTATCTG 59.243 41.667 0.00 0.00 0.00 2.90
774 775 4.754618 TCACAGTGTCCATGTGTGTTTATC 59.245 41.667 11.76 0.00 46.49 1.75
775 776 4.713553 TCACAGTGTCCATGTGTGTTTAT 58.286 39.130 11.76 0.00 46.49 1.40
776 777 4.143986 TCACAGTGTCCATGTGTGTTTA 57.856 40.909 11.76 0.00 46.49 2.01
780 781 4.514816 TGTTAATCACAGTGTCCATGTGTG 59.485 41.667 6.99 6.99 46.49 3.82
781 782 4.713553 TGTTAATCACAGTGTCCATGTGT 58.286 39.130 0.00 0.00 46.49 3.72
783 784 6.939730 TGTATTGTTAATCACAGTGTCCATGT 59.060 34.615 0.00 0.00 36.48 3.21
784 785 7.376435 TGTATTGTTAATCACAGTGTCCATG 57.624 36.000 0.00 0.00 36.48 3.66
785 786 7.067372 CCATGTATTGTTAATCACAGTGTCCAT 59.933 37.037 0.00 0.00 36.48 3.41
786 787 6.374053 CCATGTATTGTTAATCACAGTGTCCA 59.626 38.462 0.00 0.00 36.48 4.02
787 788 6.677920 GCCATGTATTGTTAATCACAGTGTCC 60.678 42.308 0.00 0.00 36.48 4.02
788 789 6.128035 TGCCATGTATTGTTAATCACAGTGTC 60.128 38.462 0.00 0.00 36.48 3.67
789 790 5.709631 TGCCATGTATTGTTAATCACAGTGT 59.290 36.000 0.00 0.00 36.48 3.55
790 791 6.193514 TGCCATGTATTGTTAATCACAGTG 57.806 37.500 0.00 0.00 36.48 3.66
792 793 6.855836 AGTTGCCATGTATTGTTAATCACAG 58.144 36.000 0.00 0.00 36.48 3.66
793 794 6.832520 AGTTGCCATGTATTGTTAATCACA 57.167 33.333 0.00 0.00 0.00 3.58
794 795 7.862372 CCATAGTTGCCATGTATTGTTAATCAC 59.138 37.037 0.00 0.00 0.00 3.06
795 796 7.559533 ACCATAGTTGCCATGTATTGTTAATCA 59.440 33.333 0.00 0.00 0.00 2.57
796 797 7.940850 ACCATAGTTGCCATGTATTGTTAATC 58.059 34.615 0.00 0.00 0.00 1.75
797 798 7.896383 ACCATAGTTGCCATGTATTGTTAAT 57.104 32.000 0.00 0.00 0.00 1.40
800 801 5.964758 CAACCATAGTTGCCATGTATTGTT 58.035 37.500 0.00 0.00 46.43 2.83
801 802 5.581126 CAACCATAGTTGCCATGTATTGT 57.419 39.130 0.00 0.00 46.43 2.71
827 828 2.157834 TTACCTAGTTGCCACGTGTG 57.842 50.000 15.65 7.24 0.00 3.82
828 829 2.158928 TGTTTACCTAGTTGCCACGTGT 60.159 45.455 15.65 0.00 0.00 4.49
829 830 2.222445 GTGTTTACCTAGTTGCCACGTG 59.778 50.000 9.08 9.08 0.00 4.49
831 832 2.222445 GTGTGTTTACCTAGTTGCCACG 59.778 50.000 0.00 0.00 0.00 4.94
832 833 3.207778 TGTGTGTTTACCTAGTTGCCAC 58.792 45.455 0.00 0.00 0.00 5.01
833 834 3.562343 TGTGTGTTTACCTAGTTGCCA 57.438 42.857 0.00 0.00 0.00 4.92
834 835 3.190535 CCATGTGTGTTTACCTAGTTGCC 59.809 47.826 0.00 0.00 0.00 4.52
835 836 3.818773 ACCATGTGTGTTTACCTAGTTGC 59.181 43.478 0.00 0.00 0.00 4.17
836 837 6.708949 AGTTACCATGTGTGTTTACCTAGTTG 59.291 38.462 0.00 0.00 0.00 3.16
837 838 6.834107 AGTTACCATGTGTGTTTACCTAGTT 58.166 36.000 0.00 0.00 0.00 2.24
838 839 6.429521 AGTTACCATGTGTGTTTACCTAGT 57.570 37.500 0.00 0.00 0.00 2.57
839 840 7.544566 CAGTAGTTACCATGTGTGTTTACCTAG 59.455 40.741 0.00 0.00 0.00 3.02
841 842 6.228258 CAGTAGTTACCATGTGTGTTTACCT 58.772 40.000 0.00 0.00 0.00 3.08
842 843 5.106830 GCAGTAGTTACCATGTGTGTTTACC 60.107 44.000 0.00 0.00 0.00 2.85
843 844 5.699458 AGCAGTAGTTACCATGTGTGTTTAC 59.301 40.000 0.00 0.00 0.00 2.01
845 846 4.714632 AGCAGTAGTTACCATGTGTGTTT 58.285 39.130 0.00 0.00 0.00 2.83
846 847 4.351874 AGCAGTAGTTACCATGTGTGTT 57.648 40.909 0.00 0.00 0.00 3.32
848 849 4.754618 TCAAAGCAGTAGTTACCATGTGTG 59.245 41.667 0.00 0.00 0.00 3.82
850 851 4.154195 GGTCAAAGCAGTAGTTACCATGTG 59.846 45.833 0.00 0.00 0.00 3.21
851 852 4.202419 TGGTCAAAGCAGTAGTTACCATGT 60.202 41.667 0.00 0.00 30.84 3.21
852 853 4.323417 TGGTCAAAGCAGTAGTTACCATG 58.677 43.478 0.00 0.00 30.84 3.66
853 854 4.634012 TGGTCAAAGCAGTAGTTACCAT 57.366 40.909 0.00 0.00 30.84 3.55
856 857 6.142817 CACAAATGGTCAAAGCAGTAGTTAC 58.857 40.000 0.00 0.00 0.00 2.50
858 859 4.037923 CCACAAATGGTCAAAGCAGTAGTT 59.962 41.667 0.00 0.00 41.64 2.24
859 860 3.569701 CCACAAATGGTCAAAGCAGTAGT 59.430 43.478 0.00 0.00 41.64 2.73
860 861 4.164822 CCACAAATGGTCAAAGCAGTAG 57.835 45.455 0.00 0.00 41.64 2.57
873 874 6.582295 GTGTGATTAACTACTTGCCACAAATG 59.418 38.462 0.00 0.00 35.26 2.32
874 875 6.264292 TGTGTGATTAACTACTTGCCACAAAT 59.736 34.615 0.00 0.00 35.26 2.32
875 876 5.590663 TGTGTGATTAACTACTTGCCACAAA 59.409 36.000 0.00 0.00 35.26 2.83
876 877 5.008217 GTGTGTGATTAACTACTTGCCACAA 59.992 40.000 0.00 0.00 35.26 3.33
877 878 4.513692 GTGTGTGATTAACTACTTGCCACA 59.486 41.667 0.00 0.00 0.00 4.17
879 880 3.743911 CGTGTGTGATTAACTACTTGCCA 59.256 43.478 0.00 0.00 0.00 4.92
880 881 3.124636 CCGTGTGTGATTAACTACTTGCC 59.875 47.826 0.00 0.00 0.00 4.52
881 882 3.424433 GCCGTGTGTGATTAACTACTTGC 60.424 47.826 0.00 0.00 0.00 4.01
882 883 3.181534 CGCCGTGTGTGATTAACTACTTG 60.182 47.826 0.00 0.00 0.00 3.16
883 884 2.991190 CGCCGTGTGTGATTAACTACTT 59.009 45.455 0.00 0.00 0.00 2.24
884 885 2.602878 CGCCGTGTGTGATTAACTACT 58.397 47.619 0.00 0.00 0.00 2.57
885 886 1.060122 GCGCCGTGTGTGATTAACTAC 59.940 52.381 0.00 0.00 0.00 2.73
887 888 0.320421 AGCGCCGTGTGTGATTAACT 60.320 50.000 2.29 0.00 0.00 2.24
888 889 0.515564 AAGCGCCGTGTGTGATTAAC 59.484 50.000 2.29 0.00 29.80 2.01
891 892 1.291877 GAGAAGCGCCGTGTGTGATT 61.292 55.000 2.29 0.00 35.40 2.57
893 894 2.355837 GAGAAGCGCCGTGTGTGA 60.356 61.111 2.29 0.00 0.00 3.58
894 895 3.767230 CGAGAAGCGCCGTGTGTG 61.767 66.667 2.29 0.00 0.00 3.82
920 1858 1.375523 AAGGCGTAAACCCAGCGAG 60.376 57.895 0.00 0.00 0.00 5.03
932 1870 6.472686 AGAGATCTAATCTAAACAAGGCGT 57.527 37.500 0.00 0.00 40.38 5.68
939 1877 9.646427 ACACACAGAAAGAGATCTAATCTAAAC 57.354 33.333 0.00 0.00 40.38 2.01
942 1880 9.645059 CAAACACACAGAAAGAGATCTAATCTA 57.355 33.333 0.00 0.00 40.38 1.98
943 1881 8.153550 ACAAACACACAGAAAGAGATCTAATCT 58.846 33.333 0.00 0.00 43.70 2.40
944 1882 8.226448 CACAAACACACAGAAAGAGATCTAATC 58.774 37.037 0.00 0.00 0.00 1.75
945 1883 7.308229 GCACAAACACACAGAAAGAGATCTAAT 60.308 37.037 0.00 0.00 0.00 1.73
957 1895 3.990092 CTAGGTAGCACAAACACACAGA 58.010 45.455 0.00 0.00 0.00 3.41
999 1937 2.100631 CAACGTCTCGGTGGCCATC 61.101 63.158 9.72 7.61 41.23 3.51
1146 2084 4.742201 CGCCACTCCACGTCCAGG 62.742 72.222 0.00 0.00 0.00 4.45
1341 2279 1.012486 CAAGGCCGTGGTCGTTACTC 61.012 60.000 11.31 0.00 35.01 2.59
1344 2282 2.344500 CCAAGGCCGTGGTCGTTA 59.656 61.111 27.89 0.00 33.63 3.18
1616 2554 2.577059 GAAGACGGCCGTGGATCA 59.423 61.111 39.65 0.00 0.00 2.92
1656 2594 0.328258 AGCAATCCAAACGCCCTAGT 59.672 50.000 0.00 0.00 0.00 2.57
1657 2595 1.463674 AAGCAATCCAAACGCCCTAG 58.536 50.000 0.00 0.00 0.00 3.02
1658 2596 2.791347 TAAGCAATCCAAACGCCCTA 57.209 45.000 0.00 0.00 0.00 3.53
1659 2597 1.917872 TTAAGCAATCCAAACGCCCT 58.082 45.000 0.00 0.00 0.00 5.19
1660 2598 2.959507 ATTAAGCAATCCAAACGCCC 57.040 45.000 0.00 0.00 0.00 6.13
1661 2599 6.640907 CCTAATAATTAAGCAATCCAAACGCC 59.359 38.462 0.00 0.00 0.00 5.68
1717 2671 4.698780 ACAACTCATCATCACCAATGTCTG 59.301 41.667 0.00 0.00 36.68 3.51
1744 2698 7.301789 GCATCAACTCTTTAGAAGAAAAGTCC 58.698 38.462 0.00 0.00 37.65 3.85
1769 2723 0.250467 CATAAGGGAGTCGCCATGGG 60.250 60.000 15.13 3.69 38.95 4.00
1786 2740 7.670605 TGTATCCAAAGTTACTACCTAGCAT 57.329 36.000 0.00 0.00 0.00 3.79
1793 2747 8.448615 GTGGACATTTGTATCCAAAGTTACTAC 58.551 37.037 0.00 0.00 46.53 2.73
1823 2777 3.746492 GTCGAGTCATGGCAAAGTTAACT 59.254 43.478 1.12 1.12 0.00 2.24
1889 2843 8.879427 TGGGTAATATGATCGAGAAAGAGATA 57.121 34.615 0.00 0.00 0.00 1.98
1904 2858 3.727726 TGCACGAGTGATGGGTAATATG 58.272 45.455 7.50 0.00 0.00 1.78
2082 3037 2.125512 GTGGTGGCGCTGGACTAG 60.126 66.667 7.64 0.00 0.00 2.57
2111 3066 3.956199 ACATTGGGATCTTTACATGCAGG 59.044 43.478 0.00 0.00 0.00 4.85
2122 3077 4.352001 ACAGGTGCATATACATTGGGATCT 59.648 41.667 0.00 0.00 0.00 2.75
2129 3084 4.821805 GCTGGTTACAGGTGCATATACATT 59.178 41.667 0.00 0.00 45.04 2.71
2147 3102 2.643551 GTGTGTATTGCCATAGCTGGT 58.356 47.619 0.00 0.00 45.10 4.00
2148 3103 1.599071 CGTGTGTATTGCCATAGCTGG 59.401 52.381 0.00 0.00 46.17 4.85
2149 3104 2.541346 CTCGTGTGTATTGCCATAGCTG 59.459 50.000 0.00 0.00 40.80 4.24
2150 3105 2.430694 TCTCGTGTGTATTGCCATAGCT 59.569 45.455 0.00 0.00 40.80 3.32
2151 3106 2.821546 TCTCGTGTGTATTGCCATAGC 58.178 47.619 0.00 0.00 40.48 2.97
2152 3107 5.049828 TGAATCTCGTGTGTATTGCCATAG 58.950 41.667 0.00 0.00 0.00 2.23
2167 3127 8.122952 GGTTACCAAACTGAATTATGAATCTCG 58.877 37.037 0.00 0.00 35.81 4.04
2177 3137 4.469657 TGCTCTGGTTACCAAACTGAATT 58.530 39.130 5.31 0.00 35.81 2.17
2251 3228 2.580815 CCTGCAGTGAGATCCGCA 59.419 61.111 13.81 0.00 0.00 5.69
2292 3269 1.729470 CTCGTCCGTAGCCAGAGCAT 61.729 60.000 0.00 0.00 43.56 3.79
2316 3293 2.515523 GGAGACCGACGGATCCGA 60.516 66.667 39.55 0.00 42.83 4.55
2340 3317 3.339093 GGTTGGGTGGGAGGGAGG 61.339 72.222 0.00 0.00 0.00 4.30
2341 3318 2.204151 AGGTTGGGTGGGAGGGAG 60.204 66.667 0.00 0.00 0.00 4.30
2344 3321 2.411765 GACACAGGTTGGGTGGGAGG 62.412 65.000 0.00 0.00 40.54 4.30
2443 3428 1.371635 AGCGCGTGAATTTTGTGCC 60.372 52.632 8.43 0.00 39.86 5.01
2508 3493 4.452733 GAGGCTTCCCGGACGTGG 62.453 72.222 0.73 0.00 35.76 4.94
2526 3511 3.969250 TTTGGACATCCGGCGAGCC 62.969 63.158 9.30 3.59 39.43 4.70
2584 3569 1.028868 GGCAGACTCACCAATGGAGC 61.029 60.000 6.16 0.00 35.79 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.