Multiple sequence alignment - TraesCS5A01G005600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G005600 chr5A 100.000 3758 0 0 1 3758 3413290 3409533 0.000000e+00 6940.0
1 TraesCS5A01G005600 chr5A 85.368 991 135 8 1769 2751 3173102 3174090 0.000000e+00 1018.0
2 TraesCS5A01G005600 chr5A 83.116 995 162 5 1764 2754 3176514 3177506 0.000000e+00 902.0
3 TraesCS5A01G005600 chr5B 94.254 1775 93 4 1622 3389 6419548 6417776 0.000000e+00 2704.0
4 TraesCS5A01G005600 chr5B 94.693 603 32 0 947 1549 6420136 6419534 0.000000e+00 937.0
5 TraesCS5A01G005600 chr5B 82.915 837 68 32 135 950 6421042 6420260 0.000000e+00 684.0
6 TraesCS5A01G005600 chr5B 91.803 122 10 0 20 141 605958011 605958132 1.790000e-38 171.0
7 TraesCS5A01G005600 chr5B 90.816 98 9 0 3134 3231 1157052 1156955 8.470000e-27 132.0
8 TraesCS5A01G005600 chr5D 84.925 995 140 8 1768 2754 6484075 6483083 0.000000e+00 998.0
9 TraesCS5A01G005600 chr5D 84.569 998 142 7 1766 2754 5367991 5368985 0.000000e+00 979.0
10 TraesCS5A01G005600 chr5D 83.116 995 162 5 1764 2754 6480895 6479903 0.000000e+00 902.0
11 TraesCS5A01G005600 chr5D 95.833 72 2 1 1557 1628 466574130 466574060 8.530000e-22 115.0
12 TraesCS5A01G005600 chr5D 91.667 60 5 0 3402 3461 449053584 449053643 2.410000e-12 84.2
13 TraesCS5A01G005600 chr7A 89.103 156 12 4 3404 3557 693097801 693097953 4.960000e-44 189.0
14 TraesCS5A01G005600 chr7A 75.500 400 74 23 2305 2692 546424414 546424027 1.390000e-39 174.0
15 TraesCS5A01G005600 chr7A 90.769 130 11 1 8 136 724634511 724634382 4.990000e-39 172.0
16 TraesCS5A01G005600 chr7A 94.048 84 2 3 1545 1628 94974690 94974610 1.420000e-24 124.0
17 TraesCS5A01G005600 chr7A 82.877 146 13 3 3403 3547 319781852 319781718 1.830000e-23 121.0
18 TraesCS5A01G005600 chr3A 86.957 161 15 2 3402 3557 746052348 746052507 3.860000e-40 176.0
19 TraesCS5A01G005600 chr3A 92.562 121 7 2 20 140 489314440 489314322 4.990000e-39 172.0
20 TraesCS5A01G005600 chr3B 93.220 118 7 1 20 136 829009014 829009131 4.990000e-39 172.0
21 TraesCS5A01G005600 chr3B 89.130 138 10 2 3 135 650611084 650611221 2.320000e-37 167.0
22 TraesCS5A01G005600 chr3B 80.380 158 27 2 3402 3557 823457280 823457125 2.370000e-22 117.0
23 TraesCS5A01G005600 chr6B 91.200 125 10 1 12 136 130308891 130308768 6.460000e-38 169.0
24 TraesCS5A01G005600 chr6B 87.000 100 9 4 3402 3499 102087657 102087754 3.970000e-20 110.0
25 TraesCS5A01G005600 chr4D 89.209 139 10 3 2 136 449823020 449823157 6.460000e-38 169.0
26 TraesCS5A01G005600 chr4B 88.406 138 12 2 2 136 299556114 299556250 3.000000e-36 163.0
27 TraesCS5A01G005600 chr4B 93.671 79 3 2 1551 1628 200348030 200348107 2.370000e-22 117.0
28 TraesCS5A01G005600 chr2B 88.406 138 12 2 2 136 16197626 16197490 3.000000e-36 163.0
29 TraesCS5A01G005600 chr2B 94.872 78 3 1 1545 1622 535713542 535713466 1.830000e-23 121.0
30 TraesCS5A01G005600 chr2B 94.872 78 3 1 1549 1626 774260995 774260919 1.830000e-23 121.0
31 TraesCS5A01G005600 chr2B 92.857 84 2 4 1543 1626 774122422 774122343 6.590000e-23 119.0
32 TraesCS5A01G005600 chrUn 86.486 148 15 5 3402 3547 113054198 113054342 1.400000e-34 158.0
33 TraesCS5A01G005600 chrUn 90.816 98 9 0 3134 3231 318918723 318918820 8.470000e-27 132.0
34 TraesCS5A01G005600 chrUn 82.759 87 12 2 3473 3557 22832302 22832387 1.450000e-09 75.0
35 TraesCS5A01G005600 chr7B 84.810 158 21 3 2537 2692 467975693 467975849 5.030000e-34 156.0
36 TraesCS5A01G005600 chr1B 84.568 162 15 7 3404 3557 62419859 62420018 6.500000e-33 152.0
37 TraesCS5A01G005600 chr2D 83.974 156 17 1 3402 3557 168964776 168964629 3.910000e-30 143.0
38 TraesCS5A01G005600 chr1D 95.238 84 3 1 1545 1628 81365639 81365557 8.470000e-27 132.0
39 TraesCS5A01G005600 chr1D 75.172 290 66 6 1209 1495 352545610 352545324 8.470000e-27 132.0
40 TraesCS5A01G005600 chr3D 98.592 71 1 0 1552 1622 601392142 601392072 3.940000e-25 126.0
41 TraesCS5A01G005600 chr7D 96.053 76 1 2 1553 1628 245380031 245379958 5.100000e-24 122.0
42 TraesCS5A01G005600 chr1A 71.721 244 67 2 1253 1495 453093003 453092761 2.420000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G005600 chr5A 3409533 3413290 3757 True 6940.000000 6940 100.000000 1 3758 1 chr5A.!!$R1 3757
1 TraesCS5A01G005600 chr5A 3173102 3177506 4404 False 960.000000 1018 84.242000 1764 2754 2 chr5A.!!$F1 990
2 TraesCS5A01G005600 chr5B 6417776 6421042 3266 True 1441.666667 2704 90.620667 135 3389 3 chr5B.!!$R2 3254
3 TraesCS5A01G005600 chr5D 5367991 5368985 994 False 979.000000 979 84.569000 1766 2754 1 chr5D.!!$F1 988
4 TraesCS5A01G005600 chr5D 6479903 6484075 4172 True 950.000000 998 84.020500 1764 2754 2 chr5D.!!$R2 990

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
104 105 0.035056 ACATGGCCTAGCTGGTTGAC 60.035 55.0 3.32 0.0 38.35 3.18 F
123 124 0.179000 CCACCATTCTAGCGCCTCTT 59.821 55.0 2.29 0.0 0.00 2.85 F
1051 1207 0.321564 TGCCATTGTGGTCCTTCTCG 60.322 55.0 0.00 0.0 40.46 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1558 1714 0.034863 GGGTACGCCTCCATTTCCAA 60.035 55.0 0.00 0.0 34.45 3.53 R
1561 1717 0.463833 CAGGGGTACGCCTCCATTTC 60.464 60.0 27.56 0.0 44.92 2.17 R
3031 3255 0.034089 GGCTAGACCAGGGCAACAAT 60.034 55.0 0.00 0.0 38.86 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 8.989653 CTTTTCTCGAAAGTCTTCCTACTATT 57.010 34.615 0.00 0.00 39.92 1.73
36 37 9.425577 CTTTTCTCGAAAGTCTTCCTACTATTT 57.574 33.333 0.00 0.00 39.92 1.40
71 72 6.642707 AAAAATAATTTCTCACCGTGTCCA 57.357 33.333 0.00 0.00 0.00 4.02
72 73 6.642707 AAAATAATTTCTCACCGTGTCCAA 57.357 33.333 0.00 0.00 0.00 3.53
73 74 5.622770 AATAATTTCTCACCGTGTCCAAC 57.377 39.130 0.00 0.00 0.00 3.77
74 75 1.892209 ATTTCTCACCGTGTCCAACC 58.108 50.000 0.00 0.00 0.00 3.77
75 76 0.542333 TTTCTCACCGTGTCCAACCA 59.458 50.000 0.00 0.00 0.00 3.67
76 77 0.105964 TTCTCACCGTGTCCAACCAG 59.894 55.000 0.00 0.00 0.00 4.00
77 78 1.961277 CTCACCGTGTCCAACCAGC 60.961 63.158 0.00 0.00 0.00 4.85
78 79 2.203139 CACCGTGTCCAACCAGCA 60.203 61.111 0.00 0.00 0.00 4.41
79 80 1.600636 CACCGTGTCCAACCAGCAT 60.601 57.895 0.00 0.00 0.00 3.79
80 81 1.600636 ACCGTGTCCAACCAGCATG 60.601 57.895 0.00 0.00 0.00 4.06
81 82 2.562912 CGTGTCCAACCAGCATGC 59.437 61.111 10.51 10.51 31.97 4.06
82 83 2.562912 GTGTCCAACCAGCATGCG 59.437 61.111 13.01 7.31 31.97 4.73
83 84 3.364441 TGTCCAACCAGCATGCGC 61.364 61.111 13.01 0.00 38.99 6.09
84 85 4.120331 GTCCAACCAGCATGCGCC 62.120 66.667 13.01 0.00 39.83 6.53
85 86 4.657408 TCCAACCAGCATGCGCCA 62.657 61.111 13.01 0.00 39.83 5.69
86 87 4.424566 CCAACCAGCATGCGCCAC 62.425 66.667 13.01 0.00 39.83 5.01
87 88 3.672447 CAACCAGCATGCGCCACA 61.672 61.111 13.01 0.00 39.83 4.17
88 89 2.677524 AACCAGCATGCGCCACAT 60.678 55.556 13.01 0.00 40.66 3.21
100 101 3.001514 CCACATGGCCTAGCTGGT 58.998 61.111 3.32 0.00 38.35 4.00
101 102 1.304282 CCACATGGCCTAGCTGGTT 59.696 57.895 3.32 0.00 38.35 3.67
102 103 1.033746 CCACATGGCCTAGCTGGTTG 61.034 60.000 3.32 0.00 38.35 3.77
103 104 0.035152 CACATGGCCTAGCTGGTTGA 60.035 55.000 3.32 0.00 38.35 3.18
104 105 0.035056 ACATGGCCTAGCTGGTTGAC 60.035 55.000 3.32 0.00 38.35 3.18
105 106 0.749454 CATGGCCTAGCTGGTTGACC 60.749 60.000 3.32 0.00 38.35 4.02
106 107 1.207488 ATGGCCTAGCTGGTTGACCA 61.207 55.000 3.32 2.40 45.30 4.02
107 108 1.377333 GGCCTAGCTGGTTGACCAC 60.377 63.158 0.00 0.00 42.01 4.16
117 118 1.369625 GGTTGACCACCATTCTAGCG 58.630 55.000 0.00 0.00 46.42 4.26
118 119 0.727398 GTTGACCACCATTCTAGCGC 59.273 55.000 0.00 0.00 0.00 5.92
119 120 0.392461 TTGACCACCATTCTAGCGCC 60.392 55.000 2.29 0.00 0.00 6.53
120 121 1.264749 TGACCACCATTCTAGCGCCT 61.265 55.000 2.29 0.00 0.00 5.52
121 122 0.530870 GACCACCATTCTAGCGCCTC 60.531 60.000 2.29 0.00 0.00 4.70
122 123 0.978146 ACCACCATTCTAGCGCCTCT 60.978 55.000 2.29 0.00 0.00 3.69
123 124 0.179000 CCACCATTCTAGCGCCTCTT 59.821 55.000 2.29 0.00 0.00 2.85
124 125 1.412710 CCACCATTCTAGCGCCTCTTA 59.587 52.381 2.29 0.00 0.00 2.10
125 126 2.158957 CCACCATTCTAGCGCCTCTTAA 60.159 50.000 2.29 0.00 0.00 1.85
126 127 3.495100 CCACCATTCTAGCGCCTCTTAAT 60.495 47.826 2.29 0.00 0.00 1.40
127 128 3.496130 CACCATTCTAGCGCCTCTTAATG 59.504 47.826 2.29 7.63 31.75 1.90
128 129 3.070018 CCATTCTAGCGCCTCTTAATGG 58.930 50.000 17.60 17.60 39.07 3.16
129 130 2.910688 TTCTAGCGCCTCTTAATGGG 57.089 50.000 2.29 0.00 0.00 4.00
130 131 1.789523 TCTAGCGCCTCTTAATGGGT 58.210 50.000 2.29 0.00 0.00 4.51
131 132 2.116238 TCTAGCGCCTCTTAATGGGTT 58.884 47.619 2.29 0.00 0.00 4.11
132 133 2.504175 TCTAGCGCCTCTTAATGGGTTT 59.496 45.455 2.29 0.00 0.00 3.27
133 134 3.707611 TCTAGCGCCTCTTAATGGGTTTA 59.292 43.478 2.29 0.00 0.00 2.01
134 135 3.359695 AGCGCCTCTTAATGGGTTTAA 57.640 42.857 2.29 0.00 0.00 1.52
135 136 3.898482 AGCGCCTCTTAATGGGTTTAAT 58.102 40.909 2.29 0.00 0.00 1.40
136 137 4.278310 AGCGCCTCTTAATGGGTTTAATT 58.722 39.130 2.29 0.00 0.00 1.40
137 138 5.442391 AGCGCCTCTTAATGGGTTTAATTA 58.558 37.500 2.29 0.00 0.00 1.40
138 139 6.068670 AGCGCCTCTTAATGGGTTTAATTAT 58.931 36.000 2.29 0.00 0.00 1.28
139 140 6.206829 AGCGCCTCTTAATGGGTTTAATTATC 59.793 38.462 2.29 0.00 0.00 1.75
140 141 6.206829 GCGCCTCTTAATGGGTTTAATTATCT 59.793 38.462 0.00 0.00 0.00 1.98
225 227 5.535753 ACTTTTTGACCAATCCAGGAAAG 57.464 39.130 0.00 0.00 0.00 2.62
228 230 5.948742 TTTTGACCAATCCAGGAAAGTTT 57.051 34.783 0.00 0.00 0.00 2.66
236 238 6.434340 ACCAATCCAGGAAAGTTTCATACTTC 59.566 38.462 17.16 0.00 46.34 3.01
287 290 4.220602 AGAATACGCTTTCAGCCCATTTTT 59.779 37.500 1.37 0.00 38.18 1.94
335 338 8.925161 TTAAAGTGTCCACAGAAAATTGAAAG 57.075 30.769 0.00 0.00 0.00 2.62
362 365 4.332543 TCTGTAAAATCAACGCTAGCATGG 59.667 41.667 16.45 0.00 0.00 3.66
367 370 0.391130 TCAACGCTAGCATGGTGACC 60.391 55.000 16.45 0.00 0.00 4.02
374 377 3.741075 CGCTAGCATGGTGACCAATCTAA 60.741 47.826 16.45 0.00 36.95 2.10
383 386 5.003804 TGGTGACCAATCTAAGAAAGCTTC 58.996 41.667 0.00 0.00 35.56 3.86
384 387 5.003804 GGTGACCAATCTAAGAAAGCTTCA 58.996 41.667 0.00 0.00 35.56 3.02
404 407 5.083533 TCACACTTTTTGGCAAACAGATT 57.916 34.783 27.67 13.69 0.00 2.40
406 409 5.936956 TCACACTTTTTGGCAAACAGATTTT 59.063 32.000 27.67 7.07 0.00 1.82
411 414 7.806960 CACTTTTTGGCAAACAGATTTTGAAAA 59.193 29.630 27.67 8.70 0.00 2.29
412 415 8.355913 ACTTTTTGGCAAACAGATTTTGAAAAA 58.644 25.926 27.67 8.52 30.98 1.94
439 442 4.759793 AGAAATACCCTTTCAACCCCTT 57.240 40.909 1.06 0.00 0.00 3.95
463 466 1.805945 GACGCGGCAGTTGACTAGG 60.806 63.158 7.34 0.00 0.00 3.02
467 470 1.671742 CGGCAGTTGACTAGGTGGT 59.328 57.895 0.00 0.00 0.00 4.16
515 518 0.554305 AAGAAACCGGTTTGAGGGGT 59.446 50.000 36.17 11.61 34.99 4.95
523 526 1.001269 GTTTGAGGGGTGGTAGGGC 60.001 63.158 0.00 0.00 0.00 5.19
528 531 1.616628 AGGGGTGGTAGGGCTGAAG 60.617 63.158 0.00 0.00 0.00 3.02
551 554 5.992217 AGTTTTGCTGGTTTCTAGAGTACAG 59.008 40.000 12.61 12.61 0.00 2.74
552 555 5.801531 TTTGCTGGTTTCTAGAGTACAGA 57.198 39.130 18.26 6.05 0.00 3.41
559 562 8.347035 GCTGGTTTCTAGAGTACAGAGTTATAG 58.653 40.741 18.26 0.00 0.00 1.31
600 604 7.556275 AGTTTGGAGTTGTTTCTTAGACATTCA 59.444 33.333 0.00 0.00 0.00 2.57
610 614 9.681692 TGTTTCTTAGACATTCATGACAATTTG 57.318 29.630 0.00 0.00 0.00 2.32
620 624 9.260002 ACATTCATGACAATTTGAGGTTAAAAC 57.740 29.630 2.79 0.00 0.00 2.43
631 635 6.877611 TTGAGGTTAAAACATGGACTTCTC 57.122 37.500 0.00 0.00 0.00 2.87
638 642 8.504815 GGTTAAAACATGGACTTCTCTCTTTAC 58.495 37.037 0.00 0.00 0.00 2.01
667 671 7.582667 AAAAAGGTAGCTGTGTTTCTATGTT 57.417 32.000 0.00 0.00 0.00 2.71
668 672 8.685838 AAAAAGGTAGCTGTGTTTCTATGTTA 57.314 30.769 0.00 0.00 0.00 2.41
669 673 8.685838 AAAAGGTAGCTGTGTTTCTATGTTAA 57.314 30.769 0.00 0.00 0.00 2.01
670 674 7.668525 AAGGTAGCTGTGTTTCTATGTTAAC 57.331 36.000 0.00 0.00 0.00 2.01
671 675 6.765403 AGGTAGCTGTGTTTCTATGTTAACA 58.235 36.000 11.41 11.41 32.21 2.41
672 676 7.221450 AGGTAGCTGTGTTTCTATGTTAACAA 58.779 34.615 13.23 1.56 36.15 2.83
673 677 7.717875 AGGTAGCTGTGTTTCTATGTTAACAAA 59.282 33.333 13.23 0.00 36.15 2.83
674 678 8.347035 GGTAGCTGTGTTTCTATGTTAACAAAA 58.653 33.333 13.23 6.12 36.15 2.44
675 679 9.166126 GTAGCTGTGTTTCTATGTTAACAAAAC 57.834 33.333 20.21 20.21 36.15 2.43
697 701 3.975168 AGCTGTTTCGGTAGGTACATT 57.025 42.857 0.00 0.00 0.00 2.71
698 702 3.596214 AGCTGTTTCGGTAGGTACATTG 58.404 45.455 0.00 0.00 0.00 2.82
699 703 3.007614 AGCTGTTTCGGTAGGTACATTGT 59.992 43.478 0.00 0.00 0.00 2.71
700 704 4.221262 AGCTGTTTCGGTAGGTACATTGTA 59.779 41.667 0.00 0.00 0.00 2.41
701 705 5.105064 AGCTGTTTCGGTAGGTACATTGTAT 60.105 40.000 0.00 0.00 0.00 2.29
794 799 8.868916 CAACATTTACAATACCAAAGCAATACC 58.131 33.333 0.00 0.00 0.00 2.73
881 891 7.863375 GTGTACATCTATCATGTTGTCTAGGAC 59.137 40.741 0.00 0.00 33.76 3.85
892 921 6.911250 TGTTGTCTAGGACATTGAACTAGA 57.089 37.500 13.96 13.96 42.40 2.43
907 936 1.699634 ACTAGACTTGGCTGCAAGGAA 59.300 47.619 0.50 0.00 36.55 3.36
908 937 2.307098 ACTAGACTTGGCTGCAAGGAAT 59.693 45.455 0.50 0.00 36.55 3.01
917 946 3.876914 TGGCTGCAAGGAATTAATAGACG 59.123 43.478 0.50 0.00 0.00 4.18
919 948 5.054477 GGCTGCAAGGAATTAATAGACGTA 58.946 41.667 0.50 0.00 0.00 3.57
920 949 5.526111 GGCTGCAAGGAATTAATAGACGTAA 59.474 40.000 0.50 0.00 0.00 3.18
945 974 4.242811 AGAGGAAGGCAATCCACCATATA 58.757 43.478 11.34 0.00 42.27 0.86
950 979 6.680197 AGGAAGGCAATCCACCATATAGATAT 59.320 38.462 11.34 0.00 42.27 1.63
1008 1164 8.727910 CAGGTCAAATATCATCATATGGACTTG 58.272 37.037 2.13 2.32 34.47 3.16
1024 1180 0.602638 CTTGACAAGTAGCACCGCCA 60.603 55.000 7.05 0.00 0.00 5.69
1048 1204 0.598065 GTGTGCCATTGTGGTCCTTC 59.402 55.000 0.00 0.00 40.46 3.46
1051 1207 0.321564 TGCCATTGTGGTCCTTCTCG 60.322 55.000 0.00 0.00 40.46 4.04
1055 1211 2.355108 CCATTGTGGTCCTTCTCGTCAT 60.355 50.000 0.00 0.00 31.35 3.06
1069 1225 3.131396 CTCGTCATGTTATTAGCCACCC 58.869 50.000 0.00 0.00 0.00 4.61
1086 1242 3.560882 CCACCCAAAAGATCTCAAGAGCT 60.561 47.826 0.00 0.00 43.46 4.09
1101 1257 5.174395 TCAAGAGCTAGAAGAATGAGTTGC 58.826 41.667 0.00 0.00 0.00 4.17
1114 1270 3.144657 TGAGTTGCATTGATCCACAGT 57.855 42.857 0.00 0.00 0.00 3.55
1184 1340 5.195146 TGAGACTATTACCTACCCTCCTGAA 59.805 44.000 0.00 0.00 0.00 3.02
1242 1398 3.070878 TCAAGTATGGCAGTGTCTTCACA 59.929 43.478 0.00 0.00 46.01 3.58
1250 1406 3.495001 GGCAGTGTCTTCACAGTAAGTTC 59.505 47.826 1.36 0.00 46.01 3.01
1257 1413 6.260050 GTGTCTTCACAGTAAGTTCATTTGGA 59.740 38.462 0.00 0.00 43.37 3.53
1305 1461 1.880027 GAGGTGACGGTGCATTTCTTT 59.120 47.619 0.00 0.00 0.00 2.52
1312 1468 2.293399 ACGGTGCATTTCTTTCAAGGTC 59.707 45.455 0.00 0.00 0.00 3.85
1493 1649 3.942829 TGCTTCAAGAAGTGGAGGTATG 58.057 45.455 11.14 0.00 40.45 2.39
1530 1686 6.106673 CAGTCGGTTGTAGACTAAATCCATT 58.893 40.000 0.00 0.00 46.16 3.16
1535 1691 6.257193 CGGTTGTAGACTAAATCCATTACCAC 59.743 42.308 1.49 0.00 0.00 4.16
1539 1695 7.553334 TGTAGACTAAATCCATTACCACAGTC 58.447 38.462 0.00 0.00 0.00 3.51
1546 1702 2.375174 TCCATTACCACAGTCTGGCTTT 59.625 45.455 4.53 0.00 45.32 3.51
1549 1705 4.949856 CCATTACCACAGTCTGGCTTTATT 59.050 41.667 4.53 0.00 45.32 1.40
1550 1706 5.418840 CCATTACCACAGTCTGGCTTTATTT 59.581 40.000 4.53 0.00 45.32 1.40
1551 1707 6.601613 CCATTACCACAGTCTGGCTTTATTTA 59.398 38.462 4.53 0.00 45.32 1.40
1552 1708 7.285401 CCATTACCACAGTCTGGCTTTATTTAT 59.715 37.037 4.53 0.00 45.32 1.40
1553 1709 8.686334 CATTACCACAGTCTGGCTTTATTTATT 58.314 33.333 4.53 0.00 45.32 1.40
1554 1710 8.644374 TTACCACAGTCTGGCTTTATTTATTT 57.356 30.769 4.53 0.00 45.32 1.40
1555 1711 9.742144 TTACCACAGTCTGGCTTTATTTATTTA 57.258 29.630 4.53 0.00 45.32 1.40
1556 1712 8.823220 ACCACAGTCTGGCTTTATTTATTTAT 57.177 30.769 4.53 0.00 45.32 1.40
1557 1713 9.255029 ACCACAGTCTGGCTTTATTTATTTATT 57.745 29.630 4.53 0.00 45.32 1.40
1572 1728 8.661352 ATTTATTTATTTTGGAAATGGAGGCG 57.339 30.769 0.00 0.00 0.00 5.52
1573 1729 5.675684 ATTTATTTTGGAAATGGAGGCGT 57.324 34.783 0.00 0.00 0.00 5.68
1574 1730 6.783708 ATTTATTTTGGAAATGGAGGCGTA 57.216 33.333 0.00 0.00 0.00 4.42
1575 1731 5.570234 TTATTTTGGAAATGGAGGCGTAC 57.430 39.130 0.00 0.00 0.00 3.67
1576 1732 1.828979 TTTGGAAATGGAGGCGTACC 58.171 50.000 0.00 0.00 0.00 3.34
1577 1733 0.034863 TTGGAAATGGAGGCGTACCC 60.035 55.000 0.00 0.00 36.11 3.69
1578 1734 1.153025 GGAAATGGAGGCGTACCCC 60.153 63.158 0.00 0.00 36.11 4.95
1579 1735 1.632965 GGAAATGGAGGCGTACCCCT 61.633 60.000 0.00 0.00 38.12 4.79
1580 1736 0.463833 GAAATGGAGGCGTACCCCTG 60.464 60.000 3.11 0.00 34.69 4.45
1581 1737 1.921869 AAATGGAGGCGTACCCCTGG 61.922 60.000 3.11 0.00 34.69 4.45
1587 1743 4.162690 GCGTACCCCTGGCCTCTG 62.163 72.222 3.32 0.00 0.00 3.35
1588 1744 4.162690 CGTACCCCTGGCCTCTGC 62.163 72.222 3.32 0.00 0.00 4.26
1589 1745 3.009115 GTACCCCTGGCCTCTGCA 61.009 66.667 3.32 0.00 40.13 4.41
1590 1746 2.042762 TACCCCTGGCCTCTGCAT 59.957 61.111 3.32 0.00 40.13 3.96
1591 1747 2.072487 TACCCCTGGCCTCTGCATC 61.072 63.158 3.32 0.00 40.13 3.91
1592 1748 2.838436 TACCCCTGGCCTCTGCATCA 62.838 60.000 3.32 0.00 40.13 3.07
1593 1749 2.764737 CCCCTGGCCTCTGCATCAT 61.765 63.158 3.32 0.00 40.13 2.45
1594 1750 1.421346 CCCCTGGCCTCTGCATCATA 61.421 60.000 3.32 0.00 40.13 2.15
1595 1751 0.475475 CCCTGGCCTCTGCATCATAA 59.525 55.000 3.32 0.00 40.13 1.90
1596 1752 1.075050 CCCTGGCCTCTGCATCATAAT 59.925 52.381 3.32 0.00 40.13 1.28
1597 1753 2.160205 CCTGGCCTCTGCATCATAATG 58.840 52.381 3.32 0.00 40.13 1.90
1598 1754 2.224695 CCTGGCCTCTGCATCATAATGA 60.225 50.000 3.32 0.00 40.13 2.57
1599 1755 3.561528 CCTGGCCTCTGCATCATAATGAT 60.562 47.826 3.32 0.00 37.65 2.45
1609 1765 3.511699 CATCATAATGATGCATGCAGCC 58.488 45.455 31.30 22.02 46.37 4.85
1610 1766 2.588620 TCATAATGATGCATGCAGCCA 58.411 42.857 31.30 26.44 44.83 4.75
1611 1767 3.161866 TCATAATGATGCATGCAGCCAT 58.838 40.909 31.30 27.32 44.83 4.40
1612 1768 3.192633 TCATAATGATGCATGCAGCCATC 59.807 43.478 31.30 20.98 44.83 3.51
1613 1769 1.704641 AATGATGCATGCAGCCATCT 58.295 45.000 31.30 18.87 44.83 2.90
1614 1770 1.704641 ATGATGCATGCAGCCATCTT 58.295 45.000 31.30 16.09 44.83 2.40
1615 1771 2.351706 TGATGCATGCAGCCATCTTA 57.648 45.000 31.30 10.43 44.83 2.10
1616 1772 2.871453 TGATGCATGCAGCCATCTTAT 58.129 42.857 31.30 9.02 44.83 1.73
1617 1773 3.227614 TGATGCATGCAGCCATCTTATT 58.772 40.909 31.30 8.21 44.83 1.40
1618 1774 4.400120 TGATGCATGCAGCCATCTTATTA 58.600 39.130 31.30 8.11 44.83 0.98
1619 1775 4.828387 TGATGCATGCAGCCATCTTATTAA 59.172 37.500 31.30 7.33 44.83 1.40
1620 1776 5.302313 TGATGCATGCAGCCATCTTATTAAA 59.698 36.000 31.30 6.79 44.83 1.52
1621 1777 5.595257 TGCATGCAGCCATCTTATTAAAA 57.405 34.783 18.46 0.00 44.83 1.52
1622 1778 6.164417 TGCATGCAGCCATCTTATTAAAAT 57.836 33.333 18.46 0.00 44.83 1.82
1623 1779 7.287512 TGCATGCAGCCATCTTATTAAAATA 57.712 32.000 18.46 0.00 44.83 1.40
1624 1780 7.372714 TGCATGCAGCCATCTTATTAAAATAG 58.627 34.615 18.46 0.00 44.83 1.73
1625 1781 7.014518 TGCATGCAGCCATCTTATTAAAATAGT 59.985 33.333 18.46 0.00 44.83 2.12
1626 1782 7.540055 GCATGCAGCCATCTTATTAAAATAGTC 59.460 37.037 14.21 0.00 37.23 2.59
1627 1783 8.790718 CATGCAGCCATCTTATTAAAATAGTCT 58.209 33.333 0.00 0.00 0.00 3.24
1628 1784 8.158169 TGCAGCCATCTTATTAAAATAGTCTG 57.842 34.615 0.00 0.00 0.00 3.51
1629 1785 7.229306 TGCAGCCATCTTATTAAAATAGTCTGG 59.771 37.037 0.00 0.00 0.00 3.86
1630 1786 7.588512 CAGCCATCTTATTAAAATAGTCTGGC 58.411 38.462 16.13 16.13 38.80 4.85
1631 1787 7.446625 CAGCCATCTTATTAAAATAGTCTGGCT 59.553 37.037 18.58 18.58 43.55 4.75
1632 1788 8.001292 AGCCATCTTATTAAAATAGTCTGGCTT 58.999 33.333 18.58 10.01 42.02 4.35
1633 1789 8.633561 GCCATCTTATTAAAATAGTCTGGCTTT 58.366 33.333 16.38 0.00 37.33 3.51
1645 1801 1.762370 TCTGGCTTTATGCATCCTCGA 59.238 47.619 0.19 0.00 45.15 4.04
1647 1803 1.486310 TGGCTTTATGCATCCTCGAGT 59.514 47.619 12.31 0.00 45.15 4.18
1676 1832 3.173668 ACTCTTAATATCGCGTTGGCA 57.826 42.857 5.77 0.00 39.92 4.92
1678 1834 4.878439 ACTCTTAATATCGCGTTGGCATA 58.122 39.130 5.77 0.00 39.92 3.14
1684 1840 1.037493 ATCGCGTTGGCATAGAGGTA 58.963 50.000 5.77 0.00 39.92 3.08
1751 1907 8.830201 ATCAAAATAATTGCACAAAGCTTACA 57.170 26.923 0.00 0.00 45.94 2.41
1855 2011 4.400884 AGTTACTCATGTTGATCTCGAGCT 59.599 41.667 7.81 0.00 0.00 4.09
1906 2062 4.703575 AGAACATGTTTGATGAGGTCCATG 59.296 41.667 13.36 0.00 35.17 3.66
1917 2073 3.499338 TGAGGTCCATGCACTTTTTCAT 58.501 40.909 0.00 0.00 0.00 2.57
1972 2131 6.289482 TCTTGTTCCCATATCTCCCTACTA 57.711 41.667 0.00 0.00 0.00 1.82
1985 2144 1.202336 CCCTACTACAGTAAACCGGCG 60.202 57.143 0.00 0.00 0.00 6.46
2006 2165 2.338620 CGATAGGGCGCGGATCAA 59.661 61.111 8.83 0.00 0.00 2.57
2082 2241 5.065218 AGTTGAGCAAGACACACTACAAAAG 59.935 40.000 0.00 0.00 0.00 2.27
2131 2290 1.183549 CCCTACAACGGTAGCAGAGT 58.816 55.000 0.00 0.00 44.64 3.24
2223 2382 1.751351 TCTTGTCTACTCAGCCATCCG 59.249 52.381 0.00 0.00 0.00 4.18
2303 2465 6.036470 GTGGGCTAGATTACAATGCTTTTTC 58.964 40.000 0.00 0.00 0.00 2.29
2401 2563 0.035439 ACATAAGCCCTTCACGGTGG 60.035 55.000 8.50 0.00 0.00 4.61
2523 2685 5.918576 TCACGTGTATGATCCATATCGTTTC 59.081 40.000 16.51 0.00 37.50 2.78
2772 2934 8.907222 AGAGAAAATAATGGTGTTTTGCATTT 57.093 26.923 0.00 0.00 29.16 2.32
2774 2936 7.873910 AGAAAATAATGGTGTTTTGCATTTGG 58.126 30.769 0.00 0.00 29.16 3.28
2787 2949 7.489757 TGTTTTGCATTTGGTTACTTAGTTGAC 59.510 33.333 0.00 0.00 0.00 3.18
2800 2962 6.973460 ACTTAGTTGACCTACTTGTGTACT 57.027 37.500 0.00 0.00 0.00 2.73
2929 3153 3.319122 AGATTCTTTGTTGTGGAACCTGC 59.681 43.478 0.00 0.00 34.36 4.85
2967 3191 7.125792 AGTCCTCGACTTGGTATGAATATTT 57.874 36.000 0.00 0.00 40.28 1.40
2968 3192 8.246430 AGTCCTCGACTTGGTATGAATATTTA 57.754 34.615 0.00 0.00 40.28 1.40
3000 3224 1.362224 TTAGCCAGCCAGTTCCTCTT 58.638 50.000 0.00 0.00 0.00 2.85
3013 3237 5.412904 CCAGTTCCTCTTGCTTACCTAAAAG 59.587 44.000 0.00 0.00 0.00 2.27
3026 3250 1.545841 CTAAAAGAAGGTGGGCCCAC 58.454 55.000 42.18 42.18 45.49 4.61
3050 3274 0.034089 ATTGTTGCCCTGGTCTAGCC 60.034 55.000 0.00 0.00 37.90 3.93
3064 3288 1.765314 TCTAGCCAGCCATTTCCTCTC 59.235 52.381 0.00 0.00 0.00 3.20
3093 3321 1.170290 AAAAACAGTTCCTCCCGCCG 61.170 55.000 0.00 0.00 0.00 6.46
3135 3363 2.799540 GCCGCCGTCTTCGTTGATC 61.800 63.158 0.00 0.00 35.01 2.92
3144 3372 1.066858 TCTTCGTTGATCAGGTGCTCC 60.067 52.381 0.00 0.00 0.00 4.70
3145 3373 0.036388 TTCGTTGATCAGGTGCTCCC 60.036 55.000 0.00 0.00 0.00 4.30
3163 3391 2.363795 CCTCGCCCCAGACTACCA 60.364 66.667 0.00 0.00 0.00 3.25
3191 3419 1.701847 AGTGTGACATTCCTCCAGCTT 59.298 47.619 0.00 0.00 0.00 3.74
3192 3420 1.808945 GTGTGACATTCCTCCAGCTTG 59.191 52.381 0.00 0.00 0.00 4.01
3215 3443 2.832838 TCCTTCTAGCAATGGAGGTCA 58.167 47.619 0.00 0.00 0.00 4.02
3221 3449 1.366319 AGCAATGGAGGTCAGAGGTT 58.634 50.000 0.00 0.00 0.00 3.50
3316 3544 6.651755 ATTTTGATTTTGCCATGATTCGAC 57.348 33.333 0.00 0.00 0.00 4.20
3325 3553 4.126437 TGCCATGATTCGACGATATTTGT 58.874 39.130 0.00 0.00 0.00 2.83
3351 3579 1.760192 ATGATCTTCCAAGCCTGCAC 58.240 50.000 0.00 0.00 0.00 4.57
3410 3638 9.938280 TTAGTAAGTCAATTACATGTAACAGCT 57.062 29.630 20.26 12.73 45.34 4.24
3411 3639 8.480643 AGTAAGTCAATTACATGTAACAGCTC 57.519 34.615 20.26 10.12 45.34 4.09
3412 3640 8.314751 AGTAAGTCAATTACATGTAACAGCTCT 58.685 33.333 20.26 11.95 45.34 4.09
3413 3641 7.602517 AAGTCAATTACATGTAACAGCTCTC 57.397 36.000 20.26 7.82 0.00 3.20
3414 3642 5.807520 AGTCAATTACATGTAACAGCTCTCG 59.192 40.000 20.26 3.84 0.00 4.04
3415 3643 5.005779 GTCAATTACATGTAACAGCTCTCGG 59.994 44.000 20.26 3.41 0.00 4.63
3416 3644 3.520290 TTACATGTAACAGCTCTCGGG 57.480 47.619 14.35 0.00 0.00 5.14
3417 3645 1.267121 ACATGTAACAGCTCTCGGGT 58.733 50.000 0.00 0.00 0.00 5.28
3419 3647 0.108138 ATGTAACAGCTCTCGGGTGC 60.108 55.000 0.00 0.00 46.30 5.01
3420 3648 1.805945 GTAACAGCTCTCGGGTGCG 60.806 63.158 3.28 1.83 46.30 5.34
3421 3649 2.273179 TAACAGCTCTCGGGTGCGT 61.273 57.895 3.28 2.48 46.30 5.24
3422 3650 2.209064 TAACAGCTCTCGGGTGCGTC 62.209 60.000 3.28 0.00 46.30 5.19
3423 3651 3.753434 CAGCTCTCGGGTGCGTCT 61.753 66.667 3.28 0.00 36.61 4.18
3424 3652 2.045242 AGCTCTCGGGTGCGTCTA 60.045 61.111 3.28 0.00 37.09 2.59
3425 3653 2.102553 GCTCTCGGGTGCGTCTAC 59.897 66.667 0.00 0.00 0.00 2.59
3426 3654 2.697761 GCTCTCGGGTGCGTCTACA 61.698 63.158 0.00 0.00 0.00 2.74
3427 3655 1.136984 CTCTCGGGTGCGTCTACAC 59.863 63.158 0.00 0.00 39.94 2.90
3434 3662 3.050703 GTGCGTCTACACCCTCATG 57.949 57.895 0.00 0.00 34.35 3.07
3435 3663 0.530744 GTGCGTCTACACCCTCATGA 59.469 55.000 0.00 0.00 34.35 3.07
3436 3664 1.067142 GTGCGTCTACACCCTCATGAA 60.067 52.381 0.00 0.00 34.35 2.57
3437 3665 1.067142 TGCGTCTACACCCTCATGAAC 60.067 52.381 0.00 0.00 0.00 3.18
3438 3666 1.067142 GCGTCTACACCCTCATGAACA 60.067 52.381 0.00 0.00 0.00 3.18
3439 3667 2.881074 CGTCTACACCCTCATGAACAG 58.119 52.381 0.00 0.00 0.00 3.16
3440 3668 2.231478 CGTCTACACCCTCATGAACAGT 59.769 50.000 0.00 0.00 0.00 3.55
3441 3669 3.442625 CGTCTACACCCTCATGAACAGTA 59.557 47.826 0.00 0.00 0.00 2.74
3442 3670 4.082408 CGTCTACACCCTCATGAACAGTAA 60.082 45.833 0.00 0.00 0.00 2.24
3443 3671 5.566032 CGTCTACACCCTCATGAACAGTAAA 60.566 44.000 0.00 0.00 0.00 2.01
3444 3672 6.407202 GTCTACACCCTCATGAACAGTAAAT 58.593 40.000 0.00 0.00 0.00 1.40
3445 3673 6.879458 GTCTACACCCTCATGAACAGTAAATT 59.121 38.462 0.00 0.00 0.00 1.82
3446 3674 7.064728 GTCTACACCCTCATGAACAGTAAATTC 59.935 40.741 0.00 0.00 0.00 2.17
3447 3675 4.695455 ACACCCTCATGAACAGTAAATTCG 59.305 41.667 0.00 0.00 0.00 3.34
3448 3676 4.695455 CACCCTCATGAACAGTAAATTCGT 59.305 41.667 0.00 0.00 0.00 3.85
3449 3677 5.872617 CACCCTCATGAACAGTAAATTCGTA 59.127 40.000 0.00 0.00 0.00 3.43
3450 3678 6.370442 CACCCTCATGAACAGTAAATTCGTAA 59.630 38.462 0.00 0.00 0.00 3.18
3451 3679 6.938030 ACCCTCATGAACAGTAAATTCGTAAA 59.062 34.615 0.00 0.00 0.00 2.01
3452 3680 7.446013 ACCCTCATGAACAGTAAATTCGTAAAA 59.554 33.333 0.00 0.00 0.00 1.52
3453 3681 7.962918 CCCTCATGAACAGTAAATTCGTAAAAG 59.037 37.037 0.00 0.00 0.00 2.27
3454 3682 8.717821 CCTCATGAACAGTAAATTCGTAAAAGA 58.282 33.333 0.00 0.00 0.00 2.52
3499 3727 6.579666 TGAAACTTTCAGGGATCAAAGATG 57.420 37.500 9.54 0.00 34.08 2.90
3500 3728 6.306199 TGAAACTTTCAGGGATCAAAGATGA 58.694 36.000 9.54 0.00 35.77 2.92
3501 3729 6.950041 TGAAACTTTCAGGGATCAAAGATGAT 59.050 34.615 9.54 0.00 40.93 2.45
3502 3730 7.121759 TGAAACTTTCAGGGATCAAAGATGATC 59.878 37.037 9.74 9.74 46.00 2.92
3515 3743 7.933215 TCAAAGATGATCACAGATTTGATGT 57.067 32.000 16.43 0.00 38.38 3.06
3516 3744 8.344446 TCAAAGATGATCACAGATTTGATGTT 57.656 30.769 16.43 0.00 38.38 2.71
3517 3745 8.456471 TCAAAGATGATCACAGATTTGATGTTC 58.544 33.333 16.43 0.79 38.38 3.18
3518 3746 6.939132 AGATGATCACAGATTTGATGTTCC 57.061 37.500 0.00 0.00 36.30 3.62
3519 3747 6.660800 AGATGATCACAGATTTGATGTTCCT 58.339 36.000 0.00 0.00 36.30 3.36
3520 3748 6.542735 AGATGATCACAGATTTGATGTTCCTG 59.457 38.462 0.00 0.00 36.30 3.86
3521 3749 4.397103 TGATCACAGATTTGATGTTCCTGC 59.603 41.667 0.00 0.00 36.30 4.85
3522 3750 3.753815 TCACAGATTTGATGTTCCTGCA 58.246 40.909 0.00 0.00 0.00 4.41
3523 3751 4.143543 TCACAGATTTGATGTTCCTGCAA 58.856 39.130 0.00 0.00 0.00 4.08
3524 3752 4.583907 TCACAGATTTGATGTTCCTGCAAA 59.416 37.500 0.00 0.00 36.15 3.68
3525 3753 4.921515 CACAGATTTGATGTTCCTGCAAAG 59.078 41.667 0.00 0.00 35.29 2.77
3526 3754 4.586001 ACAGATTTGATGTTCCTGCAAAGT 59.414 37.500 0.00 0.00 35.29 2.66
3527 3755 5.069516 ACAGATTTGATGTTCCTGCAAAGTT 59.930 36.000 0.00 0.00 35.29 2.66
3528 3756 5.987347 CAGATTTGATGTTCCTGCAAAGTTT 59.013 36.000 0.00 0.00 35.29 2.66
3529 3757 6.145048 CAGATTTGATGTTCCTGCAAAGTTTC 59.855 38.462 0.00 0.00 35.29 2.78
3530 3758 4.998671 TTGATGTTCCTGCAAAGTTTCA 57.001 36.364 0.00 0.00 0.00 2.69
3531 3759 4.572985 TGATGTTCCTGCAAAGTTTCAG 57.427 40.909 0.00 7.63 0.00 3.02
3532 3760 2.869233 TGTTCCTGCAAAGTTTCAGC 57.131 45.000 8.64 1.41 0.00 4.26
3533 3761 2.378038 TGTTCCTGCAAAGTTTCAGCT 58.622 42.857 8.64 0.00 0.00 4.24
3534 3762 3.550820 TGTTCCTGCAAAGTTTCAGCTA 58.449 40.909 8.64 0.04 0.00 3.32
3535 3763 3.315191 TGTTCCTGCAAAGTTTCAGCTAC 59.685 43.478 8.64 8.74 0.00 3.58
3536 3764 3.207265 TCCTGCAAAGTTTCAGCTACA 57.793 42.857 8.64 0.00 0.00 2.74
3537 3765 3.550820 TCCTGCAAAGTTTCAGCTACAA 58.449 40.909 8.64 0.00 0.00 2.41
3538 3766 3.951037 TCCTGCAAAGTTTCAGCTACAAA 59.049 39.130 8.64 0.00 0.00 2.83
3539 3767 4.584325 TCCTGCAAAGTTTCAGCTACAAAT 59.416 37.500 8.64 0.00 0.00 2.32
3540 3768 5.767665 TCCTGCAAAGTTTCAGCTACAAATA 59.232 36.000 8.64 0.00 0.00 1.40
3541 3769 6.072508 TCCTGCAAAGTTTCAGCTACAAATAG 60.073 38.462 8.64 0.00 0.00 1.73
3553 3781 4.125912 CTACAAATAGCATTCGCAGAGC 57.874 45.455 0.00 0.00 42.27 4.09
3562 3790 1.270550 CATTCGCAGAGCCCTTTTGTT 59.729 47.619 0.00 0.00 38.43 2.83
3568 3796 2.890945 GCAGAGCCCTTTTGTTTCCTTA 59.109 45.455 0.00 0.00 0.00 2.69
3569 3797 3.320826 GCAGAGCCCTTTTGTTTCCTTAA 59.679 43.478 0.00 0.00 0.00 1.85
3570 3798 4.021104 GCAGAGCCCTTTTGTTTCCTTAAT 60.021 41.667 0.00 0.00 0.00 1.40
3571 3799 5.511373 GCAGAGCCCTTTTGTTTCCTTAATT 60.511 40.000 0.00 0.00 0.00 1.40
3572 3800 6.295067 GCAGAGCCCTTTTGTTTCCTTAATTA 60.295 38.462 0.00 0.00 0.00 1.40
3573 3801 7.315890 CAGAGCCCTTTTGTTTCCTTAATTAG 58.684 38.462 0.00 0.00 0.00 1.73
3574 3802 7.176690 CAGAGCCCTTTTGTTTCCTTAATTAGA 59.823 37.037 0.00 0.00 0.00 2.10
3576 4398 7.667557 AGCCCTTTTGTTTCCTTAATTAGAAC 58.332 34.615 0.00 0.00 0.00 3.01
3622 4444 9.017669 CAATAAATCTTAACAAGAGCTTGATGC 57.982 33.333 16.47 0.00 42.93 3.91
3623 4445 5.573337 AATCTTAACAAGAGCTTGATGCC 57.427 39.130 16.47 0.00 42.93 4.40
3625 4447 3.009473 TCTTAACAAGAGCTTGATGCCCT 59.991 43.478 16.47 0.00 42.93 5.19
3626 4448 2.299326 AACAAGAGCTTGATGCCCTT 57.701 45.000 16.47 0.00 40.47 3.95
3627 4449 2.299326 ACAAGAGCTTGATGCCCTTT 57.701 45.000 16.47 0.00 37.65 3.11
3629 4451 2.298163 ACAAGAGCTTGATGCCCTTTTG 59.702 45.455 16.47 0.00 37.65 2.44
3652 7019 3.443037 CAATTTCTTGCGTGAAACACCA 58.557 40.909 6.15 0.00 38.54 4.17
3654 7021 2.031258 TTCTTGCGTGAAACACCAGA 57.969 45.000 0.00 0.00 35.74 3.86
3655 7022 1.295792 TCTTGCGTGAAACACCAGAC 58.704 50.000 0.00 0.00 35.74 3.51
3656 7023 1.134521 TCTTGCGTGAAACACCAGACT 60.135 47.619 0.00 0.00 35.74 3.24
3657 7024 1.261619 CTTGCGTGAAACACCAGACTC 59.738 52.381 0.00 0.00 35.74 3.36
3658 7025 0.874175 TGCGTGAAACACCAGACTCG 60.874 55.000 0.00 0.00 35.74 4.18
3659 7026 0.596600 GCGTGAAACACCAGACTCGA 60.597 55.000 0.00 0.00 35.74 4.04
3660 7027 1.129326 CGTGAAACACCAGACTCGAC 58.871 55.000 0.00 0.00 35.74 4.20
3661 7028 1.499049 GTGAAACACCAGACTCGACC 58.501 55.000 0.00 0.00 36.32 4.79
3664 7031 0.393077 AAACACCAGACTCGACCCTG 59.607 55.000 3.05 3.05 0.00 4.45
3665 7032 0.469331 AACACCAGACTCGACCCTGA 60.469 55.000 10.06 0.00 32.37 3.86
3666 7033 0.896019 ACACCAGACTCGACCCTGAG 60.896 60.000 10.06 5.83 41.86 3.35
3667 7034 0.609406 CACCAGACTCGACCCTGAGA 60.609 60.000 10.06 0.00 39.35 3.27
3668 7035 0.322997 ACCAGACTCGACCCTGAGAG 60.323 60.000 10.06 0.00 39.35 3.20
3673 7040 2.702592 ACTCGACCCTGAGAGTCTAG 57.297 55.000 0.00 0.00 43.52 2.43
3674 7041 1.910671 ACTCGACCCTGAGAGTCTAGT 59.089 52.381 0.00 0.00 43.52 2.57
3675 7042 2.306512 ACTCGACCCTGAGAGTCTAGTT 59.693 50.000 0.00 0.00 43.52 2.24
3676 7043 3.244981 ACTCGACCCTGAGAGTCTAGTTT 60.245 47.826 0.00 0.00 43.52 2.66
3677 7044 3.759618 CTCGACCCTGAGAGTCTAGTTTT 59.240 47.826 0.00 0.00 38.28 2.43
3678 7045 4.914983 TCGACCCTGAGAGTCTAGTTTTA 58.085 43.478 0.00 0.00 31.83 1.52
3679 7046 4.942483 TCGACCCTGAGAGTCTAGTTTTAG 59.058 45.833 0.00 0.00 31.83 1.85
3680 7047 4.096682 CGACCCTGAGAGTCTAGTTTTAGG 59.903 50.000 0.00 0.00 31.83 2.69
3682 7049 4.045590 ACCCTGAGAGTCTAGTTTTAGGGA 59.954 45.833 20.24 0.00 45.10 4.20
3683 7050 5.024118 CCCTGAGAGTCTAGTTTTAGGGAA 58.976 45.833 13.01 0.00 45.10 3.97
3684 7051 5.128008 CCCTGAGAGTCTAGTTTTAGGGAAG 59.872 48.000 13.01 0.00 45.10 3.46
3685 7052 5.394773 CCTGAGAGTCTAGTTTTAGGGAAGC 60.395 48.000 0.00 0.00 0.00 3.86
3686 7053 5.084519 TGAGAGTCTAGTTTTAGGGAAGCA 58.915 41.667 0.00 0.00 0.00 3.91
3687 7054 5.186021 TGAGAGTCTAGTTTTAGGGAAGCAG 59.814 44.000 0.00 0.00 0.00 4.24
3688 7055 4.081365 AGAGTCTAGTTTTAGGGAAGCAGC 60.081 45.833 0.00 0.00 0.00 5.25
3689 7056 3.583086 AGTCTAGTTTTAGGGAAGCAGCA 59.417 43.478 0.00 0.00 0.00 4.41
3690 7057 3.935828 GTCTAGTTTTAGGGAAGCAGCAG 59.064 47.826 0.00 0.00 0.00 4.24
3691 7058 1.539157 AGTTTTAGGGAAGCAGCAGC 58.461 50.000 0.00 0.00 42.56 5.25
3703 7070 1.281899 GCAGCAGCTAGACTTAACGG 58.718 55.000 0.00 0.00 37.91 4.44
3704 7071 1.404315 GCAGCAGCTAGACTTAACGGT 60.404 52.381 0.00 0.00 37.91 4.83
3705 7072 2.931320 GCAGCAGCTAGACTTAACGGTT 60.931 50.000 0.00 0.00 37.91 4.44
3706 7073 2.924290 CAGCAGCTAGACTTAACGGTTC 59.076 50.000 0.00 0.00 0.00 3.62
3707 7074 1.918609 GCAGCTAGACTTAACGGTTCG 59.081 52.381 0.00 0.00 0.00 3.95
3708 7075 2.527100 CAGCTAGACTTAACGGTTCGG 58.473 52.381 0.00 0.00 0.00 4.30
3709 7076 2.094854 CAGCTAGACTTAACGGTTCGGT 60.095 50.000 0.00 0.00 0.00 4.69
3710 7077 2.094854 AGCTAGACTTAACGGTTCGGTG 60.095 50.000 0.00 0.00 0.00 4.94
3711 7078 2.095059 GCTAGACTTAACGGTTCGGTGA 60.095 50.000 0.00 0.00 0.00 4.02
3712 7079 3.612479 GCTAGACTTAACGGTTCGGTGAA 60.612 47.826 0.00 0.00 0.00 3.18
3713 7080 3.022607 AGACTTAACGGTTCGGTGAAG 57.977 47.619 0.00 0.00 0.00 3.02
3714 7081 1.458445 GACTTAACGGTTCGGTGAAGC 59.542 52.381 0.00 0.00 36.79 3.86
3715 7082 1.202557 ACTTAACGGTTCGGTGAAGCA 60.203 47.619 9.13 0.00 39.64 3.91
3716 7083 1.459592 CTTAACGGTTCGGTGAAGCAG 59.540 52.381 9.13 4.81 39.64 4.24
3717 7084 0.390124 TAACGGTTCGGTGAAGCAGT 59.610 50.000 9.13 5.34 39.64 4.40
3718 7085 1.157870 AACGGTTCGGTGAAGCAGTG 61.158 55.000 9.13 0.00 39.64 3.66
3719 7086 2.946762 GGTTCGGTGAAGCAGTGC 59.053 61.111 7.13 7.13 39.49 4.40
3720 7087 1.598130 GGTTCGGTGAAGCAGTGCT 60.598 57.895 13.14 13.14 42.56 4.40
3721 7088 1.571460 GTTCGGTGAAGCAGTGCTG 59.429 57.895 20.55 5.65 39.62 4.41
3722 7089 1.597854 TTCGGTGAAGCAGTGCTGG 60.598 57.895 20.55 6.24 39.62 4.85
3723 7090 3.052082 CGGTGAAGCAGTGCTGGG 61.052 66.667 20.55 2.54 39.62 4.45
3724 7091 2.431683 GGTGAAGCAGTGCTGGGA 59.568 61.111 20.55 2.29 39.62 4.37
3725 7092 1.228245 GGTGAAGCAGTGCTGGGAA 60.228 57.895 20.55 1.50 39.62 3.97
3726 7093 0.610232 GGTGAAGCAGTGCTGGGAAT 60.610 55.000 20.55 1.19 39.62 3.01
3727 7094 0.524862 GTGAAGCAGTGCTGGGAATG 59.475 55.000 20.55 0.00 39.62 2.67
3728 7095 1.246056 TGAAGCAGTGCTGGGAATGC 61.246 55.000 20.55 6.43 39.62 3.56
3729 7096 2.262471 GAAGCAGTGCTGGGAATGCG 62.262 60.000 20.55 0.00 43.41 4.73
3730 7097 2.747460 GCAGTGCTGGGAATGCGA 60.747 61.111 8.18 0.00 0.00 5.10
3731 7098 2.117156 GCAGTGCTGGGAATGCGAT 61.117 57.895 8.18 0.00 0.00 4.58
3732 7099 2.020131 CAGTGCTGGGAATGCGATC 58.980 57.895 0.00 0.00 0.00 3.69
3733 7100 0.745486 CAGTGCTGGGAATGCGATCA 60.745 55.000 0.00 0.00 0.00 2.92
3734 7101 0.035152 AGTGCTGGGAATGCGATCAA 60.035 50.000 0.00 0.00 0.00 2.57
3735 7102 1.027357 GTGCTGGGAATGCGATCAAT 58.973 50.000 0.00 0.00 0.00 2.57
3736 7103 2.158769 AGTGCTGGGAATGCGATCAATA 60.159 45.455 0.00 0.00 0.00 1.90
3737 7104 2.031682 GTGCTGGGAATGCGATCAATAC 60.032 50.000 0.00 0.00 0.00 1.89
3738 7105 2.221169 GCTGGGAATGCGATCAATACA 58.779 47.619 0.00 0.00 0.00 2.29
3739 7106 2.031682 GCTGGGAATGCGATCAATACAC 60.032 50.000 0.00 0.00 0.00 2.90
3740 7107 3.205338 CTGGGAATGCGATCAATACACA 58.795 45.455 0.00 0.00 0.00 3.72
3741 7108 3.205338 TGGGAATGCGATCAATACACAG 58.795 45.455 0.00 0.00 0.00 3.66
3742 7109 3.118445 TGGGAATGCGATCAATACACAGA 60.118 43.478 0.00 0.00 0.00 3.41
3743 7110 4.067896 GGGAATGCGATCAATACACAGAT 58.932 43.478 0.00 0.00 0.00 2.90
3744 7111 4.153117 GGGAATGCGATCAATACACAGATC 59.847 45.833 0.00 0.00 37.79 2.75
3745 7112 4.153117 GGAATGCGATCAATACACAGATCC 59.847 45.833 0.00 0.00 37.87 3.36
3746 7113 3.817709 TGCGATCAATACACAGATCCA 57.182 42.857 0.00 0.00 37.87 3.41
3747 7114 3.721035 TGCGATCAATACACAGATCCAG 58.279 45.455 0.00 0.00 37.87 3.86
3748 7115 3.384467 TGCGATCAATACACAGATCCAGA 59.616 43.478 0.00 0.00 37.87 3.86
3749 7116 4.039609 TGCGATCAATACACAGATCCAGAT 59.960 41.667 0.00 0.00 37.87 2.90
3750 7117 4.624882 GCGATCAATACACAGATCCAGATC 59.375 45.833 0.00 0.00 37.87 2.75
3752 7119 6.349694 GCGATCAATACACAGATCCAGATCTA 60.350 42.308 9.78 0.00 45.78 1.98
3753 7120 7.630297 GCGATCAATACACAGATCCAGATCTAT 60.630 40.741 9.78 0.00 45.78 1.98
3754 7121 8.249638 CGATCAATACACAGATCCAGATCTATT 58.750 37.037 9.78 4.12 45.78 1.73
3755 7122 9.585099 GATCAATACACAGATCCAGATCTATTC 57.415 37.037 9.78 0.00 45.78 1.75
3756 7123 8.482852 TCAATACACAGATCCAGATCTATTCA 57.517 34.615 9.78 0.00 45.78 2.57
3757 7124 8.363390 TCAATACACAGATCCAGATCTATTCAC 58.637 37.037 9.78 0.00 45.78 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 6.642707 TGGACACGGTGAGAAATTATTTTT 57.357 33.333 16.29 0.00 0.00 1.94
49 50 6.443792 GTTGGACACGGTGAGAAATTATTTT 58.556 36.000 16.29 0.00 0.00 1.82
50 51 5.048294 GGTTGGACACGGTGAGAAATTATTT 60.048 40.000 16.29 0.00 0.00 1.40
51 52 4.457949 GGTTGGACACGGTGAGAAATTATT 59.542 41.667 16.29 0.00 0.00 1.40
52 53 4.007659 GGTTGGACACGGTGAGAAATTAT 58.992 43.478 16.29 0.00 0.00 1.28
53 54 3.181453 TGGTTGGACACGGTGAGAAATTA 60.181 43.478 16.29 0.00 0.00 1.40
54 55 2.227194 GGTTGGACACGGTGAGAAATT 58.773 47.619 16.29 0.00 0.00 1.82
55 56 1.142060 TGGTTGGACACGGTGAGAAAT 59.858 47.619 16.29 0.00 0.00 2.17
56 57 0.542333 TGGTTGGACACGGTGAGAAA 59.458 50.000 16.29 2.75 0.00 2.52
57 58 0.105964 CTGGTTGGACACGGTGAGAA 59.894 55.000 16.29 1.29 0.00 2.87
58 59 1.745890 CTGGTTGGACACGGTGAGA 59.254 57.895 16.29 0.00 0.00 3.27
59 60 1.961277 GCTGGTTGGACACGGTGAG 60.961 63.158 16.29 0.56 0.00 3.51
60 61 2.050836 ATGCTGGTTGGACACGGTGA 62.051 55.000 16.29 0.00 0.00 4.02
61 62 1.600636 ATGCTGGTTGGACACGGTG 60.601 57.895 6.58 6.58 0.00 4.94
62 63 1.600636 CATGCTGGTTGGACACGGT 60.601 57.895 0.00 0.00 0.00 4.83
63 64 2.981560 GCATGCTGGTTGGACACGG 61.982 63.158 11.37 0.00 0.00 4.94
64 65 2.562912 GCATGCTGGTTGGACACG 59.437 61.111 11.37 0.00 0.00 4.49
65 66 2.562912 CGCATGCTGGTTGGACAC 59.437 61.111 17.13 0.00 0.00 3.67
66 67 3.364441 GCGCATGCTGGTTGGACA 61.364 61.111 17.13 0.00 38.39 4.02
67 68 4.120331 GGCGCATGCTGGTTGGAC 62.120 66.667 17.13 0.00 42.25 4.02
68 69 4.657408 TGGCGCATGCTGGTTGGA 62.657 61.111 17.13 0.00 42.25 3.53
69 70 4.424566 GTGGCGCATGCTGGTTGG 62.425 66.667 17.13 0.00 42.25 3.77
70 71 2.997075 ATGTGGCGCATGCTGGTTG 61.997 57.895 17.13 0.00 42.25 3.77
71 72 2.677524 ATGTGGCGCATGCTGGTT 60.678 55.556 17.13 0.00 42.25 3.67
83 84 1.033746 CAACCAGCTAGGCCATGTGG 61.034 60.000 5.01 8.81 43.14 4.17
84 85 0.035152 TCAACCAGCTAGGCCATGTG 60.035 55.000 5.01 0.00 43.14 3.21
85 86 0.035056 GTCAACCAGCTAGGCCATGT 60.035 55.000 5.01 0.00 43.14 3.21
86 87 0.749454 GGTCAACCAGCTAGGCCATG 60.749 60.000 5.01 0.00 43.14 3.66
87 88 1.207488 TGGTCAACCAGCTAGGCCAT 61.207 55.000 5.01 0.00 42.01 4.40
88 89 1.845664 TGGTCAACCAGCTAGGCCA 60.846 57.895 5.01 0.07 42.01 5.36
89 90 3.077907 TGGTCAACCAGCTAGGCC 58.922 61.111 0.00 0.00 42.01 5.19
99 100 0.727398 GCGCTAGAATGGTGGTCAAC 59.273 55.000 0.00 0.00 0.00 3.18
100 101 0.392461 GGCGCTAGAATGGTGGTCAA 60.392 55.000 7.64 0.00 0.00 3.18
101 102 1.220749 GGCGCTAGAATGGTGGTCA 59.779 57.895 7.64 0.00 0.00 4.02
102 103 0.530870 GAGGCGCTAGAATGGTGGTC 60.531 60.000 7.64 0.00 0.00 4.02
103 104 0.978146 AGAGGCGCTAGAATGGTGGT 60.978 55.000 7.64 0.00 0.00 4.16
104 105 0.179000 AAGAGGCGCTAGAATGGTGG 59.821 55.000 7.64 0.00 0.00 4.61
105 106 2.890808 TAAGAGGCGCTAGAATGGTG 57.109 50.000 7.64 0.00 0.00 4.17
106 107 3.495100 CCATTAAGAGGCGCTAGAATGGT 60.495 47.826 24.57 0.37 41.23 3.55
107 108 3.070018 CCATTAAGAGGCGCTAGAATGG 58.930 50.000 21.86 21.86 40.76 3.16
108 109 3.070018 CCCATTAAGAGGCGCTAGAATG 58.930 50.000 7.64 14.77 33.21 2.67
109 110 2.706190 ACCCATTAAGAGGCGCTAGAAT 59.294 45.455 7.64 0.00 0.00 2.40
110 111 2.116238 ACCCATTAAGAGGCGCTAGAA 58.884 47.619 7.64 0.00 0.00 2.10
111 112 1.789523 ACCCATTAAGAGGCGCTAGA 58.210 50.000 7.64 0.00 0.00 2.43
112 113 2.622064 AACCCATTAAGAGGCGCTAG 57.378 50.000 7.64 0.00 0.00 3.42
113 114 4.490899 TTAAACCCATTAAGAGGCGCTA 57.509 40.909 7.64 0.00 0.00 4.26
114 115 3.359695 TTAAACCCATTAAGAGGCGCT 57.640 42.857 7.64 0.00 0.00 5.92
115 116 4.649088 AATTAAACCCATTAAGAGGCGC 57.351 40.909 0.00 0.00 36.94 6.53
116 117 7.745620 AGATAATTAAACCCATTAAGAGGCG 57.254 36.000 0.00 0.00 36.94 5.52
127 128 9.542462 GGCCAAGATAAAAAGATAATTAAACCC 57.458 33.333 0.00 0.00 0.00 4.11
137 138 9.372189 AGCAATAATAGGCCAAGATAAAAAGAT 57.628 29.630 5.01 0.00 0.00 2.40
138 139 8.766994 AGCAATAATAGGCCAAGATAAAAAGA 57.233 30.769 5.01 0.00 0.00 2.52
139 140 9.822185 AAAGCAATAATAGGCCAAGATAAAAAG 57.178 29.630 5.01 0.00 0.00 2.27
140 141 9.598517 CAAAGCAATAATAGGCCAAGATAAAAA 57.401 29.630 5.01 0.00 0.00 1.94
158 159 9.344309 CAAAAGATCAAACAAAAACAAAGCAAT 57.656 25.926 0.00 0.00 0.00 3.56
228 230 9.460019 TCAAATATGGTTGTCAATGAAGTATGA 57.540 29.630 0.00 0.00 0.00 2.15
306 309 9.883142 TCAATTTTCTGTGGACACTTTAATTTT 57.117 25.926 3.91 0.00 0.00 1.82
307 310 9.883142 TTCAATTTTCTGTGGACACTTTAATTT 57.117 25.926 3.91 0.00 0.00 1.82
308 311 9.883142 TTTCAATTTTCTGTGGACACTTTAATT 57.117 25.926 3.91 2.83 0.00 1.40
309 312 9.533253 CTTTCAATTTTCTGTGGACACTTTAAT 57.467 29.630 3.91 0.00 0.00 1.40
310 313 8.744652 TCTTTCAATTTTCTGTGGACACTTTAA 58.255 29.630 3.91 0.00 0.00 1.52
311 314 8.287439 TCTTTCAATTTTCTGTGGACACTTTA 57.713 30.769 3.91 0.00 0.00 1.85
312 315 7.169158 TCTTTCAATTTTCTGTGGACACTTT 57.831 32.000 3.91 0.00 0.00 2.66
313 316 6.773976 TCTTTCAATTTTCTGTGGACACTT 57.226 33.333 3.91 0.00 0.00 3.16
314 317 6.773976 TTCTTTCAATTTTCTGTGGACACT 57.226 33.333 3.91 0.00 0.00 3.55
315 318 7.922811 AGAATTCTTTCAATTTTCTGTGGACAC 59.077 33.333 0.88 0.00 34.08 3.67
316 319 7.922278 CAGAATTCTTTCAATTTTCTGTGGACA 59.078 33.333 4.86 0.00 38.82 4.02
317 320 8.290663 CAGAATTCTTTCAATTTTCTGTGGAC 57.709 34.615 4.86 0.00 38.82 4.02
335 338 6.542852 TGCTAGCGTTGATTTTACAGAATTC 58.457 36.000 10.77 0.00 0.00 2.17
347 350 1.656652 GTCACCATGCTAGCGTTGAT 58.343 50.000 14.56 0.00 0.00 2.57
362 365 5.470098 TGTGAAGCTTTCTTAGATTGGTCAC 59.530 40.000 0.00 0.00 31.30 3.67
367 370 8.749499 CAAAAAGTGTGAAGCTTTCTTAGATTG 58.251 33.333 0.00 6.80 35.38 2.67
374 377 3.195396 TGCCAAAAAGTGTGAAGCTTTCT 59.805 39.130 0.00 0.00 35.38 2.52
383 386 5.799681 AAATCTGTTTGCCAAAAAGTGTG 57.200 34.783 7.23 0.00 0.00 3.82
384 387 5.936956 TCAAAATCTGTTTGCCAAAAAGTGT 59.063 32.000 7.23 0.00 0.00 3.55
411 414 7.837689 GGGGTTGAAAGGGTATTTCTACTATTT 59.162 37.037 12.33 0.00 35.52 1.40
412 415 7.185856 AGGGGTTGAAAGGGTATTTCTACTATT 59.814 37.037 12.33 0.37 35.52 1.73
439 442 1.063327 CAACTGCCGCGTCACAAAA 59.937 52.632 4.92 0.00 0.00 2.44
463 466 2.933906 TCGTTTTGACTGAGTTGACCAC 59.066 45.455 0.00 0.00 0.00 4.16
467 470 3.113322 CGACTCGTTTTGACTGAGTTGA 58.887 45.455 3.30 0.00 43.73 3.18
515 518 1.144913 AGCAAAACTTCAGCCCTACCA 59.855 47.619 0.00 0.00 0.00 3.25
523 526 5.529060 ACTCTAGAAACCAGCAAAACTTCAG 59.471 40.000 0.00 0.00 0.00 3.02
528 531 5.989777 TCTGTACTCTAGAAACCAGCAAAAC 59.010 40.000 0.00 0.00 0.00 2.43
559 562 7.019774 ACTCCAAACTTTAAAACCGTCTTAC 57.980 36.000 0.00 0.00 0.00 2.34
562 565 5.416639 ACAACTCCAAACTTTAAAACCGTCT 59.583 36.000 0.00 0.00 0.00 4.18
563 566 5.643664 ACAACTCCAAACTTTAAAACCGTC 58.356 37.500 0.00 0.00 0.00 4.79
564 567 5.648178 ACAACTCCAAACTTTAAAACCGT 57.352 34.783 0.00 0.00 0.00 4.83
565 568 6.809689 AGAAACAACTCCAAACTTTAAAACCG 59.190 34.615 0.00 0.00 0.00 4.44
578 582 7.173218 GTCATGAATGTCTAAGAAACAACTCCA 59.827 37.037 0.00 0.00 0.00 3.86
600 604 7.872483 GTCCATGTTTTAACCTCAAATTGTCAT 59.128 33.333 0.00 0.00 0.00 3.06
609 613 6.043243 AGAGAGAAGTCCATGTTTTAACCTCA 59.957 38.462 0.00 0.00 0.00 3.86
610 614 6.468543 AGAGAGAAGTCCATGTTTTAACCTC 58.531 40.000 0.00 0.00 0.00 3.85
612 616 7.511959 AAAGAGAGAAGTCCATGTTTTAACC 57.488 36.000 0.00 0.00 0.00 2.85
647 651 6.765403 TGTTAACATAGAAACACAGCTACCT 58.235 36.000 3.59 0.00 30.88 3.08
648 652 7.429636 TTGTTAACATAGAAACACAGCTACC 57.570 36.000 9.56 0.00 35.43 3.18
649 653 9.166126 GTTTTGTTAACATAGAAACACAGCTAC 57.834 33.333 21.35 2.81 35.43 3.58
650 654 9.116067 AGTTTTGTTAACATAGAAACACAGCTA 57.884 29.630 25.25 1.18 35.43 3.32
651 655 7.996385 AGTTTTGTTAACATAGAAACACAGCT 58.004 30.769 25.25 10.30 35.43 4.24
652 656 9.382244 CTAGTTTTGTTAACATAGAAACACAGC 57.618 33.333 25.25 8.16 35.43 4.40
653 657 9.382244 GCTAGTTTTGTTAACATAGAAACACAG 57.618 33.333 25.25 22.07 35.43 3.66
654 658 9.116067 AGCTAGTTTTGTTAACATAGAAACACA 57.884 29.630 25.25 16.31 35.43 3.72
655 659 9.382244 CAGCTAGTTTTGTTAACATAGAAACAC 57.618 33.333 25.25 17.73 35.43 3.32
656 660 9.116067 ACAGCTAGTTTTGTTAACATAGAAACA 57.884 29.630 25.25 15.49 33.77 2.83
657 661 9.946165 AACAGCTAGTTTTGTTAACATAGAAAC 57.054 29.630 19.73 19.73 37.03 2.78
673 677 3.828451 TGTACCTACCGAAACAGCTAGTT 59.172 43.478 0.00 0.00 43.89 2.24
674 678 3.424703 TGTACCTACCGAAACAGCTAGT 58.575 45.455 0.00 0.00 0.00 2.57
675 679 4.650754 ATGTACCTACCGAAACAGCTAG 57.349 45.455 0.00 0.00 0.00 3.42
764 769 7.492524 TGCTTTGGTATTGTAAATGTTGACAA 58.507 30.769 0.00 0.00 39.74 3.18
765 770 7.043961 TGCTTTGGTATTGTAAATGTTGACA 57.956 32.000 0.00 0.00 0.00 3.58
766 771 7.938563 TTGCTTTGGTATTGTAAATGTTGAC 57.061 32.000 0.00 0.00 0.00 3.18
847 857 9.586435 CAACATGATAGATGTACACTTACTTCA 57.414 33.333 0.00 0.00 35.66 3.02
848 858 9.587772 ACAACATGATAGATGTACACTTACTTC 57.412 33.333 0.00 0.00 34.14 3.01
853 863 8.417106 CCTAGACAACATGATAGATGTACACTT 58.583 37.037 0.00 0.00 0.00 3.16
854 864 7.780271 TCCTAGACAACATGATAGATGTACACT 59.220 37.037 0.00 0.13 0.00 3.55
855 865 7.863375 GTCCTAGACAACATGATAGATGTACAC 59.137 40.741 0.00 0.00 32.09 2.90
856 866 7.559897 TGTCCTAGACAACATGATAGATGTACA 59.440 37.037 0.00 0.00 39.78 2.90
863 873 7.984050 AGTTCAATGTCCTAGACAACATGATAG 59.016 37.037 0.00 0.00 45.96 2.08
877 887 3.584848 AGCCAAGTCTAGTTCAATGTCCT 59.415 43.478 0.00 0.00 0.00 3.85
881 891 3.076621 TGCAGCCAAGTCTAGTTCAATG 58.923 45.455 0.00 0.00 0.00 2.82
892 921 5.358160 GTCTATTAATTCCTTGCAGCCAAGT 59.642 40.000 0.00 0.00 45.57 3.16
907 936 8.044908 TGCCTTCCTCTTTTTACGTCTATTAAT 58.955 33.333 0.00 0.00 0.00 1.40
908 937 7.388437 TGCCTTCCTCTTTTTACGTCTATTAA 58.612 34.615 0.00 0.00 0.00 1.40
917 946 4.082190 GGTGGATTGCCTTCCTCTTTTTAC 60.082 45.833 3.91 0.00 36.68 2.01
919 948 2.899900 GGTGGATTGCCTTCCTCTTTTT 59.100 45.455 3.91 0.00 36.68 1.94
920 949 2.158325 TGGTGGATTGCCTTCCTCTTTT 60.158 45.455 3.91 0.00 36.68 2.27
962 1118 8.803235 TGACCTGCGATTATATTAGTATGAGTT 58.197 33.333 0.00 0.00 0.00 3.01
975 1131 9.842775 ATATGATGATATTTGACCTGCGATTAT 57.157 29.630 0.00 0.00 0.00 1.28
977 1133 7.066645 CCATATGATGATATTTGACCTGCGATT 59.933 37.037 3.65 0.00 0.00 3.34
1008 1164 0.673644 ACATGGCGGTGCTACTTGTC 60.674 55.000 0.00 0.00 0.00 3.18
1032 1188 0.321564 CGAGAAGGACCACAATGGCA 60.322 55.000 0.00 0.00 42.67 4.92
1048 1204 3.131396 GGGTGGCTAATAACATGACGAG 58.869 50.000 0.00 0.00 0.00 4.18
1051 1207 5.417580 TCTTTTGGGTGGCTAATAACATGAC 59.582 40.000 0.00 0.00 0.00 3.06
1055 1211 5.826643 AGATCTTTTGGGTGGCTAATAACA 58.173 37.500 0.00 0.00 0.00 2.41
1069 1225 8.605746 CATTCTTCTAGCTCTTGAGATCTTTTG 58.394 37.037 0.00 0.00 0.00 2.44
1086 1242 6.317140 GTGGATCAATGCAACTCATTCTTCTA 59.683 38.462 0.00 0.00 43.21 2.10
1101 1257 3.127548 GGCTTGTACACTGTGGATCAATG 59.872 47.826 13.09 8.88 0.00 2.82
1114 1270 2.685897 GTGGAAGTTGTTGGCTTGTACA 59.314 45.455 0.00 0.00 0.00 2.90
1205 1361 7.874528 TGCCATACTTGACATACAGATCATTAG 59.125 37.037 0.00 0.00 0.00 1.73
1242 1398 5.941788 ACCTTGAGTCCAAATGAACTTACT 58.058 37.500 0.00 0.00 0.00 2.24
1250 1406 7.390440 TCAATAGTGTTACCTTGAGTCCAAATG 59.610 37.037 0.00 0.00 0.00 2.32
1257 1413 5.395324 CCCGATCAATAGTGTTACCTTGAGT 60.395 44.000 0.00 0.00 31.69 3.41
1312 1468 3.305676 CCGTGGCTAATATCTGACTCCAG 60.306 52.174 0.00 0.00 41.74 3.86
1401 1557 0.097674 AGCGCATCTGTTCAATTCGC 59.902 50.000 11.47 0.00 38.72 4.70
1510 1666 6.257193 GTGGTAATGGATTTAGTCTACAACCG 59.743 42.308 0.00 0.00 31.68 4.44
1511 1667 7.107542 TGTGGTAATGGATTTAGTCTACAACC 58.892 38.462 0.00 0.00 0.00 3.77
1546 1702 9.757227 CGCCTCCATTTCCAAAATAAATAAATA 57.243 29.630 0.00 0.00 0.00 1.40
1549 1705 7.176589 ACGCCTCCATTTCCAAAATAAATAA 57.823 32.000 0.00 0.00 0.00 1.40
1550 1706 6.783708 ACGCCTCCATTTCCAAAATAAATA 57.216 33.333 0.00 0.00 0.00 1.40
1551 1707 5.675684 ACGCCTCCATTTCCAAAATAAAT 57.324 34.783 0.00 0.00 0.00 1.40
1552 1708 5.105675 GGTACGCCTCCATTTCCAAAATAAA 60.106 40.000 0.00 0.00 0.00 1.40
1553 1709 4.399934 GGTACGCCTCCATTTCCAAAATAA 59.600 41.667 0.00 0.00 0.00 1.40
1554 1710 3.949113 GGTACGCCTCCATTTCCAAAATA 59.051 43.478 0.00 0.00 0.00 1.40
1555 1711 2.758423 GGTACGCCTCCATTTCCAAAAT 59.242 45.455 0.00 0.00 0.00 1.82
1556 1712 2.164338 GGTACGCCTCCATTTCCAAAA 58.836 47.619 0.00 0.00 0.00 2.44
1557 1713 1.614850 GGGTACGCCTCCATTTCCAAA 60.615 52.381 0.00 0.00 34.45 3.28
1558 1714 0.034863 GGGTACGCCTCCATTTCCAA 60.035 55.000 0.00 0.00 34.45 3.53
1559 1715 1.605453 GGGTACGCCTCCATTTCCA 59.395 57.895 0.00 0.00 34.45 3.53
1560 1716 1.153025 GGGGTACGCCTCCATTTCC 60.153 63.158 21.18 0.00 34.11 3.13
1561 1717 0.463833 CAGGGGTACGCCTCCATTTC 60.464 60.000 27.56 0.00 44.92 2.17
1562 1718 1.607612 CAGGGGTACGCCTCCATTT 59.392 57.895 27.56 4.34 44.92 2.32
1563 1719 2.375345 CCAGGGGTACGCCTCCATT 61.375 63.158 27.56 5.12 44.92 3.16
1564 1720 2.768344 CCAGGGGTACGCCTCCAT 60.768 66.667 27.56 5.53 44.92 3.41
1570 1726 4.162690 CAGAGGCCAGGGGTACGC 62.163 72.222 5.01 0.29 43.76 4.42
1571 1727 4.162690 GCAGAGGCCAGGGGTACG 62.163 72.222 5.01 0.00 0.00 3.67
1572 1728 2.330924 GATGCAGAGGCCAGGGGTAC 62.331 65.000 5.01 0.00 40.13 3.34
1573 1729 2.042762 ATGCAGAGGCCAGGGGTA 59.957 61.111 5.01 0.00 40.13 3.69
1574 1730 3.415087 GATGCAGAGGCCAGGGGT 61.415 66.667 5.01 0.00 40.13 4.95
1575 1731 1.421346 TATGATGCAGAGGCCAGGGG 61.421 60.000 5.01 0.00 40.13 4.79
1576 1732 0.475475 TTATGATGCAGAGGCCAGGG 59.525 55.000 5.01 0.00 40.13 4.45
1577 1733 2.160205 CATTATGATGCAGAGGCCAGG 58.840 52.381 5.01 0.00 40.13 4.45
1578 1734 3.136009 TCATTATGATGCAGAGGCCAG 57.864 47.619 5.01 0.00 40.13 4.85
1579 1735 3.418047 CATCATTATGATGCAGAGGCCA 58.582 45.455 20.33 0.00 46.37 5.36
1589 1745 3.161866 TGGCTGCATGCATCATTATGAT 58.838 40.909 22.97 1.25 45.15 2.45
1590 1746 2.588620 TGGCTGCATGCATCATTATGA 58.411 42.857 22.97 0.00 45.15 2.15
1591 1747 3.193479 AGATGGCTGCATGCATCATTATG 59.807 43.478 26.74 14.81 45.15 1.90
1592 1748 3.431415 AGATGGCTGCATGCATCATTAT 58.569 40.909 26.74 19.38 45.15 1.28
1593 1749 2.871453 AGATGGCTGCATGCATCATTA 58.129 42.857 26.74 13.79 45.15 1.90
1594 1750 1.704641 AGATGGCTGCATGCATCATT 58.295 45.000 26.74 17.93 45.15 2.57
1595 1751 1.704641 AAGATGGCTGCATGCATCAT 58.295 45.000 26.51 26.51 45.15 2.45
1596 1752 2.351706 TAAGATGGCTGCATGCATCA 57.648 45.000 22.97 21.78 45.15 3.07
1597 1753 3.936372 AATAAGATGGCTGCATGCATC 57.064 42.857 22.97 17.75 45.15 3.91
1598 1754 5.794726 TTTAATAAGATGGCTGCATGCAT 57.205 34.783 22.97 5.92 45.15 3.96
1599 1755 5.595257 TTTTAATAAGATGGCTGCATGCA 57.405 34.783 21.29 21.29 45.15 3.96
1600 1756 7.373493 ACTATTTTAATAAGATGGCTGCATGC 58.627 34.615 11.82 11.82 41.94 4.06
1601 1757 8.790718 AGACTATTTTAATAAGATGGCTGCATG 58.209 33.333 0.50 0.00 0.00 4.06
1602 1758 8.790718 CAGACTATTTTAATAAGATGGCTGCAT 58.209 33.333 0.50 0.00 0.00 3.96
1603 1759 7.229306 CCAGACTATTTTAATAAGATGGCTGCA 59.771 37.037 0.50 0.00 0.00 4.41
1604 1760 7.588512 CCAGACTATTTTAATAAGATGGCTGC 58.411 38.462 0.00 0.00 0.00 5.25
1605 1761 7.446625 AGCCAGACTATTTTAATAAGATGGCTG 59.553 37.037 21.28 11.42 43.66 4.85
1606 1762 7.521669 AGCCAGACTATTTTAATAAGATGGCT 58.478 34.615 18.72 18.72 42.24 4.75
1607 1763 7.751768 AGCCAGACTATTTTAATAAGATGGC 57.248 36.000 16.24 16.24 39.92 4.40
1615 1771 8.579863 GGATGCATAAAGCCAGACTATTTTAAT 58.420 33.333 0.00 0.00 44.83 1.40
1616 1772 7.779798 AGGATGCATAAAGCCAGACTATTTTAA 59.220 33.333 0.00 0.00 44.83 1.52
1617 1773 7.290061 AGGATGCATAAAGCCAGACTATTTTA 58.710 34.615 0.00 0.00 44.83 1.52
1618 1774 6.131961 AGGATGCATAAAGCCAGACTATTTT 58.868 36.000 0.00 0.00 44.83 1.82
1619 1775 5.699143 AGGATGCATAAAGCCAGACTATTT 58.301 37.500 0.00 0.00 44.83 1.40
1620 1776 5.312079 GAGGATGCATAAAGCCAGACTATT 58.688 41.667 0.00 0.00 44.83 1.73
1621 1777 4.562347 CGAGGATGCATAAAGCCAGACTAT 60.562 45.833 0.00 0.00 44.83 2.12
1622 1778 3.243873 CGAGGATGCATAAAGCCAGACTA 60.244 47.826 0.00 0.00 44.83 2.59
1623 1779 2.484417 CGAGGATGCATAAAGCCAGACT 60.484 50.000 0.00 0.00 44.83 3.24
1624 1780 1.869767 CGAGGATGCATAAAGCCAGAC 59.130 52.381 0.00 0.00 44.83 3.51
1625 1781 1.762370 TCGAGGATGCATAAAGCCAGA 59.238 47.619 0.00 0.00 44.83 3.86
1626 1782 2.141517 CTCGAGGATGCATAAAGCCAG 58.858 52.381 3.91 0.00 44.83 4.85
1627 1783 1.486310 ACTCGAGGATGCATAAAGCCA 59.514 47.619 18.41 0.00 44.83 4.75
1628 1784 2.246719 ACTCGAGGATGCATAAAGCC 57.753 50.000 18.41 0.00 44.83 4.35
1629 1785 3.462021 AGAACTCGAGGATGCATAAAGC 58.538 45.455 18.41 0.00 45.96 3.51
1630 1786 6.276847 AGTTAGAACTCGAGGATGCATAAAG 58.723 40.000 18.41 0.00 32.86 1.85
1631 1787 6.222038 AGTTAGAACTCGAGGATGCATAAA 57.778 37.500 18.41 0.00 32.86 1.40
1632 1788 5.854010 AGTTAGAACTCGAGGATGCATAA 57.146 39.130 18.41 4.29 32.86 1.90
1633 1789 6.546403 AGTTAGTTAGAACTCGAGGATGCATA 59.454 38.462 18.41 0.00 40.37 3.14
1634 1790 5.361285 AGTTAGTTAGAACTCGAGGATGCAT 59.639 40.000 18.41 0.00 40.37 3.96
1635 1791 4.705507 AGTTAGTTAGAACTCGAGGATGCA 59.294 41.667 18.41 0.00 40.37 3.96
1645 1801 8.619546 ACGCGATATTAAGAGTTAGTTAGAACT 58.380 33.333 15.93 0.00 42.42 3.01
1647 1803 9.229784 CAACGCGATATTAAGAGTTAGTTAGAA 57.770 33.333 15.93 0.00 0.00 2.10
1751 1907 4.934001 CCTGCATATACAATCAATCTCGCT 59.066 41.667 0.00 0.00 0.00 4.93
1763 1919 3.874543 CGCAAAGTAACCCTGCATATACA 59.125 43.478 0.00 0.00 35.78 2.29
1855 2011 2.561419 CCTCTTTTCCGAGTAGACACCA 59.439 50.000 0.00 0.00 0.00 4.17
1906 2062 4.556523 GCTTTCGATCTCATGAAAAAGTGC 59.443 41.667 0.00 0.00 34.00 4.40
1917 2073 3.701542 AGGTCATACTGCTTTCGATCTCA 59.298 43.478 0.00 0.00 0.00 3.27
2006 2165 5.047943 ACGTCAGAGAGTATTTGTGTTAGCT 60.048 40.000 0.00 0.00 0.00 3.32
2065 2224 6.145534 TCGATTAGCTTTTGTAGTGTGTCTTG 59.854 38.462 0.00 0.00 0.00 3.02
2082 2241 3.687572 TTGTACTCGGAGTCGATTAGC 57.312 47.619 15.05 0.00 45.04 3.09
2131 2290 4.955811 ATGACATGATAAGCCCGACTAA 57.044 40.909 0.00 0.00 0.00 2.24
2223 2382 0.322975 TGGCAGCTCTCAAGAAGACC 59.677 55.000 0.00 0.00 0.00 3.85
2303 2465 2.452295 ATGCAGCGTATCCATCTCTG 57.548 50.000 0.00 0.00 0.00 3.35
2401 2563 2.869233 TGTTTGCCTTGCTTTGTCTC 57.131 45.000 0.00 0.00 0.00 3.36
2523 2685 2.085320 TCCTCTCTTCTTTCGAGACCG 58.915 52.381 0.00 0.00 34.11 4.79
2754 2916 7.449247 AGTAACCAAATGCAAAACACCATTAT 58.551 30.769 0.00 0.00 31.82 1.28
2772 2934 6.098695 ACACAAGTAGGTCAACTAAGTAACCA 59.901 38.462 0.00 0.00 34.09 3.67
2774 2936 8.355913 AGTACACAAGTAGGTCAACTAAGTAAC 58.644 37.037 0.00 0.00 32.37 2.50
2787 2949 6.985188 ATATGTTGCAAGTACACAAGTAGG 57.015 37.500 0.00 0.00 0.00 3.18
2800 2962 6.704050 ACACGTGCTATACATATATGTTGCAA 59.296 34.615 27.06 13.04 41.97 4.08
2886 3110 9.197694 GAATCTAACGCATTGTAGTTCATCTAT 57.802 33.333 3.57 0.00 0.00 1.98
2891 3115 7.172532 ACAAAGAATCTAACGCATTGTAGTTCA 59.827 33.333 3.57 0.00 0.00 3.18
2903 3127 5.238650 AGGTTCCACAACAAAGAATCTAACG 59.761 40.000 0.00 0.00 33.70 3.18
2909 3133 2.365293 GGCAGGTTCCACAACAAAGAAT 59.635 45.455 0.00 0.00 33.70 2.40
2929 3153 1.003718 GGACTTGAACTCGGGTGGG 60.004 63.158 0.00 0.00 0.00 4.61
2967 3191 4.644685 GGCTGGCTAAATCAGGAAAATGTA 59.355 41.667 0.00 0.00 33.16 2.29
2968 3192 3.448660 GGCTGGCTAAATCAGGAAAATGT 59.551 43.478 0.00 0.00 33.16 2.71
2979 3203 1.918957 AGAGGAACTGGCTGGCTAAAT 59.081 47.619 2.00 0.00 41.55 1.40
3000 3224 3.812882 GCCCACCTTCTTTTAGGTAAGCA 60.813 47.826 9.92 0.00 46.80 3.91
3031 3255 0.034089 GGCTAGACCAGGGCAACAAT 60.034 55.000 0.00 0.00 38.86 2.71
3050 3274 0.731417 CAAGCGAGAGGAAATGGCTG 59.269 55.000 0.00 0.00 31.61 4.85
3056 3280 2.851263 TTTAGGCAAGCGAGAGGAAA 57.149 45.000 0.00 0.00 0.00 3.13
3122 3350 0.716108 GCACCTGATCAACGAAGACG 59.284 55.000 0.00 0.00 45.75 4.18
3127 3355 1.596934 GGGAGCACCTGATCAACGA 59.403 57.895 0.00 0.00 35.85 3.85
3130 3358 1.229951 AGGGGGAGCACCTGATCAA 60.230 57.895 0.00 0.00 40.03 2.57
3131 3359 1.690633 GAGGGGGAGCACCTGATCA 60.691 63.158 0.00 0.00 38.79 2.92
3144 3372 3.155167 GTAGTCTGGGGCGAGGGG 61.155 72.222 0.00 0.00 0.00 4.79
3145 3373 3.155167 GGTAGTCTGGGGCGAGGG 61.155 72.222 0.00 0.00 0.00 4.30
3163 3391 3.511477 AGGAATGTCACACTGACCTACT 58.489 45.455 0.00 0.00 46.40 2.57
3175 3403 2.957402 AACAAGCTGGAGGAATGTCA 57.043 45.000 0.00 0.00 0.00 3.58
3186 3414 4.380233 CCATTGCTAGAAGGAAACAAGCTG 60.380 45.833 0.00 0.00 34.28 4.24
3191 3419 3.330701 ACCTCCATTGCTAGAAGGAAACA 59.669 43.478 0.00 0.00 0.00 2.83
3192 3420 3.942115 GACCTCCATTGCTAGAAGGAAAC 59.058 47.826 0.00 0.00 0.00 2.78
3282 3510 9.685828 ATGGCAAAATCAAAATTCATTCTTTTG 57.314 25.926 0.00 0.00 42.33 2.44
3285 3513 8.624367 TCATGGCAAAATCAAAATTCATTCTT 57.376 26.923 0.00 0.00 0.00 2.52
3292 3520 6.183360 CGTCGAATCATGGCAAAATCAAAATT 60.183 34.615 0.00 0.00 0.00 1.82
3293 3521 5.289193 CGTCGAATCATGGCAAAATCAAAAT 59.711 36.000 0.00 0.00 0.00 1.82
3297 3525 3.006247 TCGTCGAATCATGGCAAAATCA 58.994 40.909 0.00 0.00 0.00 2.57
3306 3534 4.905866 GGCAACAAATATCGTCGAATCATG 59.094 41.667 0.00 0.00 0.00 3.07
3316 3544 6.128172 GGAAGATCATAGGGCAACAAATATCG 60.128 42.308 0.00 0.00 39.74 2.92
3325 3553 2.423373 GGCTTGGAAGATCATAGGGCAA 60.423 50.000 0.00 0.00 0.00 4.52
3389 3617 6.311445 CGAGAGCTGTTACATGTAATTGACTT 59.689 38.462 20.72 6.89 0.00 3.01
3390 3618 5.807520 CGAGAGCTGTTACATGTAATTGACT 59.192 40.000 20.72 15.13 0.00 3.41
3391 3619 5.005779 CCGAGAGCTGTTACATGTAATTGAC 59.994 44.000 20.72 9.72 0.00 3.18
3392 3620 5.109210 CCGAGAGCTGTTACATGTAATTGA 58.891 41.667 20.72 7.92 0.00 2.57
3393 3621 4.271049 CCCGAGAGCTGTTACATGTAATTG 59.729 45.833 20.72 16.35 0.00 2.32
3394 3622 4.081087 ACCCGAGAGCTGTTACATGTAATT 60.081 41.667 20.72 7.86 0.00 1.40
3395 3623 3.451178 ACCCGAGAGCTGTTACATGTAAT 59.549 43.478 20.72 5.38 0.00 1.89
3396 3624 2.829720 ACCCGAGAGCTGTTACATGTAA 59.170 45.455 14.35 14.35 0.00 2.41
3397 3625 2.165641 CACCCGAGAGCTGTTACATGTA 59.834 50.000 0.08 0.08 0.00 2.29
3398 3626 1.066858 CACCCGAGAGCTGTTACATGT 60.067 52.381 2.69 2.69 0.00 3.21
3399 3627 1.645034 CACCCGAGAGCTGTTACATG 58.355 55.000 0.00 0.00 0.00 3.21
3400 3628 0.108138 GCACCCGAGAGCTGTTACAT 60.108 55.000 0.00 0.00 0.00 2.29
3401 3629 1.292223 GCACCCGAGAGCTGTTACA 59.708 57.895 0.00 0.00 0.00 2.41
3402 3630 1.805945 CGCACCCGAGAGCTGTTAC 60.806 63.158 0.00 0.00 36.29 2.50
3403 3631 2.209064 GACGCACCCGAGAGCTGTTA 62.209 60.000 0.00 0.00 38.29 2.41
3404 3632 3.575351 GACGCACCCGAGAGCTGTT 62.575 63.158 0.00 0.00 38.29 3.16
3405 3633 4.057428 GACGCACCCGAGAGCTGT 62.057 66.667 0.00 0.00 38.29 4.40
3406 3634 2.407428 TAGACGCACCCGAGAGCTG 61.407 63.158 0.00 0.00 38.29 4.24
3407 3635 2.045242 TAGACGCACCCGAGAGCT 60.045 61.111 0.00 0.00 38.29 4.09
3408 3636 2.102553 GTAGACGCACCCGAGAGC 59.897 66.667 0.00 0.00 38.29 4.09
3409 3637 1.136984 GTGTAGACGCACCCGAGAG 59.863 63.158 0.00 0.00 38.29 3.20
3410 3638 3.271014 GTGTAGACGCACCCGAGA 58.729 61.111 0.00 0.00 38.29 4.04
3416 3644 0.530744 TCATGAGGGTGTAGACGCAC 59.469 55.000 9.80 3.77 37.50 5.34
3417 3645 1.067142 GTTCATGAGGGTGTAGACGCA 60.067 52.381 9.80 0.00 37.50 5.24
3418 3646 1.067142 TGTTCATGAGGGTGTAGACGC 60.067 52.381 0.00 0.00 35.25 5.19
3419 3647 2.231478 ACTGTTCATGAGGGTGTAGACG 59.769 50.000 0.00 0.00 0.00 4.18
3420 3648 3.963428 ACTGTTCATGAGGGTGTAGAC 57.037 47.619 0.00 0.00 0.00 2.59
3421 3649 6.620877 ATTTACTGTTCATGAGGGTGTAGA 57.379 37.500 0.00 0.00 0.00 2.59
3422 3650 6.036083 CGAATTTACTGTTCATGAGGGTGTAG 59.964 42.308 0.00 0.00 0.00 2.74
3423 3651 5.872617 CGAATTTACTGTTCATGAGGGTGTA 59.127 40.000 0.00 0.00 0.00 2.90
3424 3652 4.695455 CGAATTTACTGTTCATGAGGGTGT 59.305 41.667 0.00 0.00 0.00 4.16
3425 3653 4.695455 ACGAATTTACTGTTCATGAGGGTG 59.305 41.667 0.00 0.00 0.00 4.61
3426 3654 4.906618 ACGAATTTACTGTTCATGAGGGT 58.093 39.130 0.00 0.00 0.00 4.34
3427 3655 6.978343 TTACGAATTTACTGTTCATGAGGG 57.022 37.500 0.00 0.00 0.00 4.30
3428 3656 8.717821 TCTTTTACGAATTTACTGTTCATGAGG 58.282 33.333 0.00 0.00 0.00 3.86
3475 3703 7.122353 ATCATCTTTGATCCCTGAAAGTTTCAG 59.878 37.037 30.69 30.69 46.06 3.02
3476 3704 6.306199 TCATCTTTGATCCCTGAAAGTTTCA 58.694 36.000 17.16 17.16 38.17 2.69
3477 3705 6.824305 TCATCTTTGATCCCTGAAAGTTTC 57.176 37.500 8.75 8.75 32.11 2.78
3490 3718 8.521170 ACATCAAATCTGTGATCATCTTTGAT 57.479 30.769 20.42 20.42 45.39 2.57
3491 3719 7.933215 ACATCAAATCTGTGATCATCTTTGA 57.067 32.000 18.71 18.71 36.04 2.69
3492 3720 7.701078 GGAACATCAAATCTGTGATCATCTTTG 59.299 37.037 0.00 7.21 36.04 2.77
3493 3721 7.614583 AGGAACATCAAATCTGTGATCATCTTT 59.385 33.333 0.00 0.00 36.04 2.52
3494 3722 7.067129 CAGGAACATCAAATCTGTGATCATCTT 59.933 37.037 0.00 0.00 36.04 2.40
3495 3723 6.542735 CAGGAACATCAAATCTGTGATCATCT 59.457 38.462 0.00 0.00 36.04 2.90
3496 3724 6.726230 CAGGAACATCAAATCTGTGATCATC 58.274 40.000 0.00 0.00 36.04 2.92
3497 3725 5.067413 GCAGGAACATCAAATCTGTGATCAT 59.933 40.000 0.00 0.00 36.04 2.45
3498 3726 4.397103 GCAGGAACATCAAATCTGTGATCA 59.603 41.667 0.00 0.00 36.04 2.92
3499 3727 4.397103 TGCAGGAACATCAAATCTGTGATC 59.603 41.667 0.00 0.00 36.04 2.92
3500 3728 4.338012 TGCAGGAACATCAAATCTGTGAT 58.662 39.130 0.00 0.00 38.84 3.06
3501 3729 3.753815 TGCAGGAACATCAAATCTGTGA 58.246 40.909 0.00 0.00 0.00 3.58
3502 3730 4.508461 TTGCAGGAACATCAAATCTGTG 57.492 40.909 0.00 0.00 0.00 3.66
3503 3731 4.586001 ACTTTGCAGGAACATCAAATCTGT 59.414 37.500 0.00 0.00 33.11 3.41
3504 3732 5.130292 ACTTTGCAGGAACATCAAATCTG 57.870 39.130 0.00 0.00 33.11 2.90
3505 3733 5.796424 AACTTTGCAGGAACATCAAATCT 57.204 34.783 0.00 0.00 33.11 2.40
3506 3734 5.984926 TGAAACTTTGCAGGAACATCAAATC 59.015 36.000 0.00 0.00 33.11 2.17
3507 3735 5.916318 TGAAACTTTGCAGGAACATCAAAT 58.084 33.333 0.00 0.00 33.11 2.32
3508 3736 5.336150 TGAAACTTTGCAGGAACATCAAA 57.664 34.783 0.00 0.00 32.71 2.69
3509 3737 4.737352 GCTGAAACTTTGCAGGAACATCAA 60.737 41.667 0.00 0.00 32.83 2.57
3510 3738 3.243501 GCTGAAACTTTGCAGGAACATCA 60.244 43.478 0.00 0.00 32.83 3.07
3511 3739 3.005155 AGCTGAAACTTTGCAGGAACATC 59.995 43.478 0.00 0.00 32.83 3.06
3512 3740 2.961062 AGCTGAAACTTTGCAGGAACAT 59.039 40.909 0.00 0.00 32.83 2.71
3513 3741 2.378038 AGCTGAAACTTTGCAGGAACA 58.622 42.857 0.00 0.00 32.83 3.18
3514 3742 3.315191 TGTAGCTGAAACTTTGCAGGAAC 59.685 43.478 0.00 0.00 32.83 3.62
3515 3743 3.550820 TGTAGCTGAAACTTTGCAGGAA 58.449 40.909 0.00 0.00 32.83 3.36
3516 3744 3.207265 TGTAGCTGAAACTTTGCAGGA 57.793 42.857 0.00 0.00 32.83 3.86
3517 3745 3.988379 TTGTAGCTGAAACTTTGCAGG 57.012 42.857 0.00 0.00 32.83 4.85
3518 3746 5.570589 GCTATTTGTAGCTGAAACTTTGCAG 59.429 40.000 0.00 0.00 39.84 4.41
3519 3747 5.009510 TGCTATTTGTAGCTGAAACTTTGCA 59.990 36.000 0.00 2.46 43.20 4.08
3520 3748 5.460646 TGCTATTTGTAGCTGAAACTTTGC 58.539 37.500 0.00 0.03 43.20 3.68
3521 3749 7.007725 CGAATGCTATTTGTAGCTGAAACTTTG 59.992 37.037 0.00 0.00 43.20 2.77
3522 3750 7.023575 CGAATGCTATTTGTAGCTGAAACTTT 58.976 34.615 0.00 0.00 43.20 2.66
3523 3751 6.546395 CGAATGCTATTTGTAGCTGAAACTT 58.454 36.000 0.00 0.00 43.20 2.66
3524 3752 5.447818 GCGAATGCTATTTGTAGCTGAAACT 60.448 40.000 0.00 0.00 43.20 2.66
3525 3753 4.730521 GCGAATGCTATTTGTAGCTGAAAC 59.269 41.667 0.00 0.00 43.20 2.78
3526 3754 4.394610 TGCGAATGCTATTTGTAGCTGAAA 59.605 37.500 0.00 0.00 43.20 2.69
3527 3755 3.938334 TGCGAATGCTATTTGTAGCTGAA 59.062 39.130 0.00 0.00 43.20 3.02
3528 3756 3.530535 TGCGAATGCTATTTGTAGCTGA 58.469 40.909 0.00 0.00 43.20 4.26
3529 3757 3.557185 TCTGCGAATGCTATTTGTAGCTG 59.443 43.478 0.00 0.00 43.20 4.24
3530 3758 3.797039 TCTGCGAATGCTATTTGTAGCT 58.203 40.909 8.68 0.00 43.20 3.32
3531 3759 3.605692 GCTCTGCGAATGCTATTTGTAGC 60.606 47.826 0.64 0.64 43.34 3.58
3532 3760 3.059325 GGCTCTGCGAATGCTATTTGTAG 60.059 47.826 0.00 7.45 43.34 2.74
3533 3761 2.872245 GGCTCTGCGAATGCTATTTGTA 59.128 45.455 0.00 0.00 43.34 2.41
3534 3762 1.672881 GGCTCTGCGAATGCTATTTGT 59.327 47.619 0.00 0.00 43.34 2.83
3535 3763 1.002033 GGGCTCTGCGAATGCTATTTG 60.002 52.381 0.00 0.00 43.34 2.32
3536 3764 1.133976 AGGGCTCTGCGAATGCTATTT 60.134 47.619 0.00 0.00 43.34 1.40
3537 3765 0.471617 AGGGCTCTGCGAATGCTATT 59.528 50.000 0.00 0.00 43.34 1.73
3538 3766 0.471617 AAGGGCTCTGCGAATGCTAT 59.528 50.000 0.00 0.00 43.34 2.97
3539 3767 0.253044 AAAGGGCTCTGCGAATGCTA 59.747 50.000 0.00 0.00 43.34 3.49
3540 3768 0.610232 AAAAGGGCTCTGCGAATGCT 60.610 50.000 0.00 0.00 43.34 3.79
3541 3769 0.457337 CAAAAGGGCTCTGCGAATGC 60.457 55.000 0.00 0.00 43.20 3.56
3542 3770 0.883833 ACAAAAGGGCTCTGCGAATG 59.116 50.000 0.00 0.00 0.00 2.67
3543 3771 1.620822 AACAAAAGGGCTCTGCGAAT 58.379 45.000 0.00 0.00 0.00 3.34
3544 3772 1.336755 GAAACAAAAGGGCTCTGCGAA 59.663 47.619 0.00 0.00 0.00 4.70
3545 3773 0.951558 GAAACAAAAGGGCTCTGCGA 59.048 50.000 0.00 0.00 0.00 5.10
3546 3774 0.039165 GGAAACAAAAGGGCTCTGCG 60.039 55.000 0.00 0.00 0.00 5.18
3547 3775 1.332195 AGGAAACAAAAGGGCTCTGC 58.668 50.000 0.00 0.00 0.00 4.26
3548 3776 5.728637 ATTAAGGAAACAAAAGGGCTCTG 57.271 39.130 0.00 0.00 0.00 3.35
3549 3777 7.238710 TCTAATTAAGGAAACAAAAGGGCTCT 58.761 34.615 0.00 0.00 0.00 4.09
3550 3778 7.462571 TCTAATTAAGGAAACAAAAGGGCTC 57.537 36.000 0.00 0.00 0.00 4.70
3551 3779 7.289084 TGTTCTAATTAAGGAAACAAAAGGGCT 59.711 33.333 0.00 0.00 0.00 5.19
3552 3780 7.438564 TGTTCTAATTAAGGAAACAAAAGGGC 58.561 34.615 0.00 0.00 0.00 5.19
3553 3781 8.856103 TCTGTTCTAATTAAGGAAACAAAAGGG 58.144 33.333 0.00 0.00 0.00 3.95
3599 4421 6.095440 GGGCATCAAGCTCTTGTTAAGATTTA 59.905 38.462 9.20 0.00 41.91 1.40
3602 4424 3.950395 GGGCATCAAGCTCTTGTTAAGAT 59.050 43.478 9.20 0.00 41.91 2.40
3603 4425 3.347216 GGGCATCAAGCTCTTGTTAAGA 58.653 45.455 9.20 0.00 41.91 2.10
3604 4426 3.772060 GGGCATCAAGCTCTTGTTAAG 57.228 47.619 9.20 0.00 41.91 1.85
3622 4444 1.799994 CGCAAGAAATTGCCAAAAGGG 59.200 47.619 7.34 0.00 44.66 3.95
3623 4445 2.221517 CACGCAAGAAATTGCCAAAAGG 59.778 45.455 7.34 0.00 44.66 3.11
3625 4447 3.170791 TCACGCAAGAAATTGCCAAAA 57.829 38.095 7.34 0.00 44.66 2.44
3626 4448 2.879002 TCACGCAAGAAATTGCCAAA 57.121 40.000 7.34 0.00 44.66 3.28
3627 4449 2.863137 GTTTCACGCAAGAAATTGCCAA 59.137 40.909 7.34 0.00 44.66 4.52
3629 4451 2.218530 GTGTTTCACGCAAGAAATTGCC 59.781 45.455 7.34 0.00 44.66 4.52
3634 7001 2.096819 GTCTGGTGTTTCACGCAAGAAA 59.903 45.455 0.00 0.00 40.09 2.52
3642 7009 1.499049 GGTCGAGTCTGGTGTTTCAC 58.501 55.000 0.00 0.00 0.00 3.18
3643 7010 0.391597 GGGTCGAGTCTGGTGTTTCA 59.608 55.000 0.00 0.00 0.00 2.69
3646 7013 0.469331 TCAGGGTCGAGTCTGGTGTT 60.469 55.000 13.07 0.00 0.00 3.32
3647 7014 0.896019 CTCAGGGTCGAGTCTGGTGT 60.896 60.000 13.07 0.00 0.00 4.16
3651 7018 3.257935 ACTCTCAGGGTCGAGTCTG 57.742 57.895 8.24 8.24 35.72 3.51
3654 7021 1.910671 ACTAGACTCTCAGGGTCGAGT 59.089 52.381 14.39 14.39 42.02 4.18
3655 7022 2.702592 ACTAGACTCTCAGGGTCGAG 57.297 55.000 13.01 13.01 40.52 4.04
3656 7023 3.436577 AAACTAGACTCTCAGGGTCGA 57.563 47.619 0.00 0.00 38.58 4.20
3657 7024 4.096682 CCTAAAACTAGACTCTCAGGGTCG 59.903 50.000 0.00 0.00 38.58 4.79
3658 7025 4.403113 CCCTAAAACTAGACTCTCAGGGTC 59.597 50.000 0.00 0.00 37.32 4.46
3659 7026 4.045590 TCCCTAAAACTAGACTCTCAGGGT 59.954 45.833 14.29 0.00 41.89 4.34
3660 7027 4.611367 TCCCTAAAACTAGACTCTCAGGG 58.389 47.826 0.00 4.75 42.46 4.45
3661 7028 5.394773 GCTTCCCTAAAACTAGACTCTCAGG 60.395 48.000 0.00 0.00 0.00 3.86
3664 7031 5.656480 CTGCTTCCCTAAAACTAGACTCTC 58.344 45.833 0.00 0.00 0.00 3.20
3665 7032 4.081365 GCTGCTTCCCTAAAACTAGACTCT 60.081 45.833 0.00 0.00 0.00 3.24
3666 7033 4.185394 GCTGCTTCCCTAAAACTAGACTC 58.815 47.826 0.00 0.00 0.00 3.36
3667 7034 3.583086 TGCTGCTTCCCTAAAACTAGACT 59.417 43.478 0.00 0.00 0.00 3.24
3668 7035 3.935828 CTGCTGCTTCCCTAAAACTAGAC 59.064 47.826 0.00 0.00 0.00 2.59
3669 7036 3.619979 GCTGCTGCTTCCCTAAAACTAGA 60.620 47.826 8.53 0.00 36.03 2.43
3670 7037 2.680339 GCTGCTGCTTCCCTAAAACTAG 59.320 50.000 8.53 0.00 36.03 2.57
3684 7051 1.281899 CCGTTAAGTCTAGCTGCTGC 58.718 55.000 13.43 7.62 40.05 5.25
3685 7052 2.656560 ACCGTTAAGTCTAGCTGCTG 57.343 50.000 13.43 2.51 0.00 4.41
3686 7053 2.415625 CGAACCGTTAAGTCTAGCTGCT 60.416 50.000 7.57 7.57 0.00 4.24
3687 7054 1.918609 CGAACCGTTAAGTCTAGCTGC 59.081 52.381 0.00 0.00 0.00 5.25
3688 7055 2.094854 ACCGAACCGTTAAGTCTAGCTG 60.095 50.000 0.00 0.00 0.00 4.24
3689 7056 2.094854 CACCGAACCGTTAAGTCTAGCT 60.095 50.000 0.00 0.00 0.00 3.32
3690 7057 2.095059 TCACCGAACCGTTAAGTCTAGC 60.095 50.000 0.00 0.00 0.00 3.42
3691 7058 3.837213 TCACCGAACCGTTAAGTCTAG 57.163 47.619 0.00 0.00 0.00 2.43
3692 7059 3.612479 GCTTCACCGAACCGTTAAGTCTA 60.612 47.826 0.00 0.00 0.00 2.59
3693 7060 2.865276 GCTTCACCGAACCGTTAAGTCT 60.865 50.000 0.00 0.00 0.00 3.24
3694 7061 1.458445 GCTTCACCGAACCGTTAAGTC 59.542 52.381 0.00 0.00 0.00 3.01
3695 7062 1.202557 TGCTTCACCGAACCGTTAAGT 60.203 47.619 0.00 0.00 0.00 2.24
3696 7063 1.459592 CTGCTTCACCGAACCGTTAAG 59.540 52.381 0.00 0.00 0.00 1.85
3697 7064 1.202557 ACTGCTTCACCGAACCGTTAA 60.203 47.619 0.00 0.00 0.00 2.01
3698 7065 0.390124 ACTGCTTCACCGAACCGTTA 59.610 50.000 0.00 0.00 0.00 3.18
3699 7066 1.145377 ACTGCTTCACCGAACCGTT 59.855 52.632 0.00 0.00 0.00 4.44
3700 7067 1.594293 CACTGCTTCACCGAACCGT 60.594 57.895 0.00 0.00 0.00 4.83
3701 7068 2.954753 GCACTGCTTCACCGAACCG 61.955 63.158 0.00 0.00 0.00 4.44
3702 7069 1.598130 AGCACTGCTTCACCGAACC 60.598 57.895 0.00 0.00 33.89 3.62
3703 7070 1.571460 CAGCACTGCTTCACCGAAC 59.429 57.895 0.00 0.00 36.40 3.95
3704 7071 1.597854 CCAGCACTGCTTCACCGAA 60.598 57.895 0.00 0.00 36.40 4.30
3705 7072 2.031012 CCAGCACTGCTTCACCGA 59.969 61.111 0.00 0.00 36.40 4.69
3706 7073 3.052082 CCCAGCACTGCTTCACCG 61.052 66.667 0.00 0.00 36.40 4.94
3707 7074 0.610232 ATTCCCAGCACTGCTTCACC 60.610 55.000 0.00 0.00 36.40 4.02
3708 7075 0.524862 CATTCCCAGCACTGCTTCAC 59.475 55.000 0.00 0.00 36.40 3.18
3709 7076 1.246056 GCATTCCCAGCACTGCTTCA 61.246 55.000 0.00 0.00 36.40 3.02
3710 7077 1.509923 GCATTCCCAGCACTGCTTC 59.490 57.895 0.00 0.00 36.40 3.86
3711 7078 2.338015 CGCATTCCCAGCACTGCTT 61.338 57.895 0.00 0.00 36.40 3.91
3712 7079 2.547640 ATCGCATTCCCAGCACTGCT 62.548 55.000 0.00 0.00 40.77 4.24
3713 7080 2.056481 GATCGCATTCCCAGCACTGC 62.056 60.000 0.00 0.00 0.00 4.40
3714 7081 0.745486 TGATCGCATTCCCAGCACTG 60.745 55.000 0.00 0.00 0.00 3.66
3715 7082 0.035152 TTGATCGCATTCCCAGCACT 60.035 50.000 0.00 0.00 0.00 4.40
3716 7083 1.027357 ATTGATCGCATTCCCAGCAC 58.973 50.000 0.00 0.00 0.00 4.40
3717 7084 2.221169 GTATTGATCGCATTCCCAGCA 58.779 47.619 0.00 0.00 0.00 4.41
3718 7085 2.031682 GTGTATTGATCGCATTCCCAGC 60.032 50.000 0.00 0.00 0.00 4.85
3719 7086 3.205338 TGTGTATTGATCGCATTCCCAG 58.795 45.455 0.00 0.00 0.00 4.45
3720 7087 3.118445 TCTGTGTATTGATCGCATTCCCA 60.118 43.478 0.00 0.00 0.00 4.37
3721 7088 3.466836 TCTGTGTATTGATCGCATTCCC 58.533 45.455 0.00 0.00 0.00 3.97
3722 7089 4.153117 GGATCTGTGTATTGATCGCATTCC 59.847 45.833 0.00 0.00 39.77 3.01
3723 7090 4.751600 TGGATCTGTGTATTGATCGCATTC 59.248 41.667 0.00 0.00 39.77 2.67
3724 7091 4.707105 TGGATCTGTGTATTGATCGCATT 58.293 39.130 0.00 0.00 39.77 3.56
3725 7092 4.039609 TCTGGATCTGTGTATTGATCGCAT 59.960 41.667 0.00 0.00 39.77 4.73
3726 7093 3.384467 TCTGGATCTGTGTATTGATCGCA 59.616 43.478 0.00 0.00 39.77 5.10
3727 7094 3.982475 TCTGGATCTGTGTATTGATCGC 58.018 45.455 0.00 0.00 39.77 4.58
3728 7095 6.023357 AGATCTGGATCTGTGTATTGATCG 57.977 41.667 11.74 0.00 45.77 3.69
3729 7096 9.585099 GAATAGATCTGGATCTGTGTATTGATC 57.415 37.037 19.71 5.62 46.80 2.92
3730 7097 9.097946 TGAATAGATCTGGATCTGTGTATTGAT 57.902 33.333 19.71 3.67 46.80 2.57
3731 7098 8.363390 GTGAATAGATCTGGATCTGTGTATTGA 58.637 37.037 19.71 6.24 46.80 2.57
3732 7099 8.531622 GTGAATAGATCTGGATCTGTGTATTG 57.468 38.462 19.71 0.00 46.80 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.