Multiple sequence alignment - TraesCS5A01G004500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G004500 chr5A 100.000 8971 0 0 1 8971 3166148 3175118 0.000000e+00 16567.0
1 TraesCS5A01G004500 chr5A 97.725 3692 79 4 3120 6809 39713215 39716903 0.000000e+00 6348.0
2 TraesCS5A01G004500 chr5A 86.647 996 127 2 6958 7953 3176524 3177513 0.000000e+00 1098.0
3 TraesCS5A01G004500 chr5A 85.312 994 136 8 6955 7946 3411522 3410537 0.000000e+00 1018.0
4 TraesCS5A01G004500 chr5A 85.088 570 72 8 1673 2231 3175871 3176438 3.630000e-158 569.0
5 TraesCS5A01G004500 chr5A 94.603 315 15 2 2266 2579 602624940 602625253 3.770000e-133 486.0
6 TraesCS5A01G004500 chr5A 94.304 316 13 3 2266 2579 576824718 576825030 6.300000e-131 479.0
7 TraesCS5A01G004500 chr5A 78.075 187 17 16 2601 2781 219304892 219304724 7.410000e-16 97.1
8 TraesCS5A01G004500 chr5A 100.000 29 0 0 1540 1568 3167330 3167358 5.000000e-03 54.7
9 TraesCS5A01G004500 chr5A 100.000 29 0 0 1183 1211 3167687 3167715 5.000000e-03 54.7
10 TraesCS5A01G004500 chr3A 97.589 3691 86 3 3120 6808 729822599 729826288 0.000000e+00 6320.0
11 TraesCS5A01G004500 chr3A 97.563 3693 85 4 3120 6808 708738356 708742047 0.000000e+00 6316.0
12 TraesCS5A01G004500 chr3A 91.353 532 43 3 2591 3120 302915920 302916450 0.000000e+00 725.0
13 TraesCS5A01G004500 chr3A 94.304 316 13 3 2266 2579 127983355 127983667 6.300000e-131 479.0
14 TraesCS5A01G004500 chr3A 93.987 316 17 2 2265 2579 729248096 729247782 2.270000e-130 477.0
15 TraesCS5A01G004500 chr2A 97.537 3695 84 5 3120 6808 548940254 548943947 0.000000e+00 6312.0
16 TraesCS5A01G004500 chr2A 97.486 3700 78 9 3123 6811 42730710 42727015 0.000000e+00 6303.0
17 TraesCS5A01G004500 chr2A 73.991 223 48 8 2011 2228 15633820 15634037 2.080000e-11 82.4
18 TraesCS5A01G004500 chr6A 97.560 3688 87 3 3123 6808 242536912 242533226 0.000000e+00 6309.0
19 TraesCS5A01G004500 chr6A 97.507 3691 87 4 3120 6808 22782147 22785834 0.000000e+00 6301.0
20 TraesCS5A01G004500 chr6A 94.855 311 13 3 2266 2575 19060175 19060483 4.870000e-132 483.0
21 TraesCS5A01G004500 chr6A 94.286 315 16 2 2266 2579 15973579 15973266 1.750000e-131 481.0
22 TraesCS5A01G004500 chr6A 94.044 319 15 3 2263 2579 571343982 571343666 1.750000e-131 481.0
23 TraesCS5A01G004500 chr6A 97.015 67 1 1 8710 8776 51002043 51001978 2.650000e-20 111.0
24 TraesCS5A01G004500 chr7A 97.533 3689 87 4 3123 6808 2352622 2348935 0.000000e+00 6305.0
25 TraesCS5A01G004500 chr7A 97.507 3691 87 4 3120 6808 92780619 92784306 0.000000e+00 6301.0
26 TraesCS5A01G004500 chr7A 99.812 533 1 0 2591 3123 30992095 30991563 0.000000e+00 979.0
27 TraesCS5A01G004500 chr7A 93.135 437 21 6 2679 3107 21087193 21087628 4.570000e-177 632.0
28 TraesCS5A01G004500 chr7A 75.991 429 99 4 7497 7923 546424414 546423988 1.520000e-52 219.0
29 TraesCS5A01G004500 chr7A 94.521 73 3 1 8705 8776 342815181 342815109 2.650000e-20 111.0
30 TraesCS5A01G004500 chr7A 100.000 57 0 0 8720 8776 494496769 494496713 1.230000e-18 106.0
31 TraesCS5A01G004500 chr7A 81.132 106 16 3 1419 1522 625378084 625378187 2.080000e-11 82.4
32 TraesCS5A01G004500 chr5D 95.859 1787 50 7 6809 8594 6484221 6482458 0.000000e+00 2868.0
33 TraesCS5A01G004500 chr5D 95.700 1465 53 10 806 2265 6485678 6484219 0.000000e+00 2348.0
34 TraesCS5A01G004500 chr5D 89.529 1146 118 2 6827 7972 5367868 5369011 0.000000e+00 1450.0
35 TraesCS5A01G004500 chr5D 95.391 716 17 7 54 753 6486382 6485667 0.000000e+00 1125.0
36 TraesCS5A01G004500 chr5D 86.284 1028 131 3 6958 7981 6480885 6479864 0.000000e+00 1109.0
37 TraesCS5A01G004500 chr5D 85.689 566 72 5 1673 2229 6481536 6480971 1.000000e-163 588.0
38 TraesCS5A01G004500 chr5D 93.467 199 2 1 8773 8971 6482298 6482111 1.470000e-72 285.0
39 TraesCS5A01G004500 chr5D 100.000 30 0 0 1182 1211 6484945 6484916 1.000000e-03 56.5
40 TraesCS5A01G004500 chr5D 100.000 29 0 0 1540 1568 6485299 6485271 5.000000e-03 54.7
41 TraesCS5A01G004500 chr5B 84.522 1066 149 11 6923 7981 6419433 6418377 0.000000e+00 1040.0
42 TraesCS5A01G004500 chr7B 92.190 525 27 8 2591 3107 742561074 742560556 0.000000e+00 730.0
43 TraesCS5A01G004500 chr7B 93.805 452 26 2 2658 3107 652058629 652058178 0.000000e+00 678.0
44 TraesCS5A01G004500 chr7B 88.938 226 22 3 1282 1506 586333531 586333308 8.870000e-70 276.0
45 TraesCS5A01G004500 chr7B 75.128 390 93 4 7497 7884 467975462 467975849 7.160000e-41 180.0
46 TraesCS5A01G004500 chr7B 95.652 69 1 2 8709 8776 88863418 88863485 9.520000e-20 110.0
47 TraesCS5A01G004500 chr7B 83.019 106 14 3 1419 1522 586333426 586333529 9.590000e-15 93.5
48 TraesCS5A01G004500 chr4D 90.824 534 43 3 2587 3118 207543306 207542777 0.000000e+00 710.0
49 TraesCS5A01G004500 chr4D 98.462 65 0 1 8713 8776 14652334 14652270 7.360000e-21 113.0
50 TraesCS5A01G004500 chr4D 100.000 61 0 0 8716 8776 295019730 295019790 7.360000e-21 113.0
51 TraesCS5A01G004500 chr4D 100.000 60 0 0 8718 8777 470854818 470854877 2.650000e-20 111.0
52 TraesCS5A01G004500 chr4D 96.923 65 2 0 8712 8776 10263524 10263588 9.520000e-20 110.0
53 TraesCS5A01G004500 chr4B 90.056 533 26 12 2618 3123 117781457 117780925 0.000000e+00 665.0
54 TraesCS5A01G004500 chr4B 100.000 60 0 0 8717 8776 217278165 217278106 2.650000e-20 111.0
55 TraesCS5A01G004500 chr4B 98.387 62 0 1 8715 8776 498403954 498403894 3.420000e-19 108.0
56 TraesCS5A01G004500 chr4A 94.304 316 15 3 2266 2579 586723274 586722960 1.750000e-131 481.0
57 TraesCS5A01G004500 chr1A 94.044 319 13 3 2266 2582 7610980 7610666 6.300000e-131 479.0
58 TraesCS5A01G004500 chr1A 100.000 61 0 0 8716 8776 244176476 244176536 7.360000e-21 113.0
59 TraesCS5A01G004500 chr1A 98.438 64 0 1 8718 8781 593280535 593280473 2.650000e-20 111.0
60 TraesCS5A01G004500 chr1A 96.970 66 1 1 8711 8776 107104640 107104576 9.520000e-20 110.0
61 TraesCS5A01G004500 chr1A 100.000 59 0 0 8718 8776 464809062 464809004 9.520000e-20 110.0
62 TraesCS5A01G004500 chr7D 88.000 225 20 4 1282 1505 543384499 543384281 8.940000e-65 259.0
63 TraesCS5A01G004500 chr7D 82.075 106 15 3 1419 1522 543384394 543384497 4.460000e-13 87.9
64 TraesCS5A01G004500 chr6B 100.000 64 0 0 8713 8776 185012697 185012760 1.580000e-22 119.0
65 TraesCS5A01G004500 chr6B 90.588 85 6 2 8693 8776 50706874 50706957 2.650000e-20 111.0
66 TraesCS5A01G004500 chr6B 94.366 71 4 0 8706 8776 82163083 82163153 9.520000e-20 110.0
67 TraesCS5A01G004500 chr3B 98.462 65 0 1 8713 8776 452975659 452975723 7.360000e-21 113.0
68 TraesCS5A01G004500 chr3B 96.970 66 2 0 8711 8776 640061891 640061956 2.650000e-20 111.0
69 TraesCS5A01G004500 chr2B 95.714 70 3 0 8707 8776 691641064 691641133 7.360000e-21 113.0
70 TraesCS5A01G004500 chr2B 100.000 59 0 0 8718 8776 514279847 514279789 9.520000e-20 110.0
71 TraesCS5A01G004500 chr1B 96.970 66 2 0 8711 8776 39685461 39685526 2.650000e-20 111.0
72 TraesCS5A01G004500 chrUn 100.000 59 0 0 8718 8776 1035689 1035747 9.520000e-20 110.0
73 TraesCS5A01G004500 chrUn 100.000 59 0 0 8718 8776 11913545 11913487 9.520000e-20 110.0
74 TraesCS5A01G004500 chrUn 100.000 59 0 0 8718 8776 17582095 17582153 9.520000e-20 110.0
75 TraesCS5A01G004500 chrUn 100.000 59 0 0 8718 8776 27366602 27366660 9.520000e-20 110.0
76 TraesCS5A01G004500 chrUn 100.000 59 0 0 8718 8776 49493996 49493938 9.520000e-20 110.0
77 TraesCS5A01G004500 chrUn 100.000 59 0 0 8718 8776 86972281 86972339 9.520000e-20 110.0
78 TraesCS5A01G004500 chrUn 100.000 59 0 0 8718 8776 349855638 349855696 9.520000e-20 110.0
79 TraesCS5A01G004500 chrUn 100.000 59 0 0 8718 8776 356902578 356902520 9.520000e-20 110.0
80 TraesCS5A01G004500 chrUn 100.000 59 0 0 8718 8776 406809124 406809066 9.520000e-20 110.0
81 TraesCS5A01G004500 chr6D 98.387 62 1 0 8715 8776 153190769 153190830 9.520000e-20 110.0
82 TraesCS5A01G004500 chr6D 95.652 69 2 1 8708 8776 269703788 269703855 9.520000e-20 110.0
83 TraesCS5A01G004500 chr2D 93.421 76 2 3 8703 8776 172402751 172402825 9.520000e-20 110.0
84 TraesCS5A01G004500 chr2D 93.243 74 1 4 8704 8776 163017133 163017063 1.230000e-18 106.0
85 TraesCS5A01G004500 chr1D 98.413 63 0 1 8715 8776 73687988 73687926 9.520000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G004500 chr5A 3166148 3175118 8970 False 16567.000 16567 100.00000 1 8971 1 chr5A.!!$F1 8970
1 TraesCS5A01G004500 chr5A 39713215 39716903 3688 False 6348.000 6348 97.72500 3120 6809 1 chr5A.!!$F2 3689
2 TraesCS5A01G004500 chr5A 3410537 3411522 985 True 1018.000 1018 85.31200 6955 7946 1 chr5A.!!$R1 991
3 TraesCS5A01G004500 chr5A 3175871 3177513 1642 False 833.500 1098 85.86750 1673 7953 2 chr5A.!!$F6 6280
4 TraesCS5A01G004500 chr3A 729822599 729826288 3689 False 6320.000 6320 97.58900 3120 6808 1 chr3A.!!$F4 3688
5 TraesCS5A01G004500 chr3A 708738356 708742047 3691 False 6316.000 6316 97.56300 3120 6808 1 chr3A.!!$F3 3688
6 TraesCS5A01G004500 chr3A 302915920 302916450 530 False 725.000 725 91.35300 2591 3120 1 chr3A.!!$F2 529
7 TraesCS5A01G004500 chr2A 548940254 548943947 3693 False 6312.000 6312 97.53700 3120 6808 1 chr2A.!!$F2 3688
8 TraesCS5A01G004500 chr2A 42727015 42730710 3695 True 6303.000 6303 97.48600 3123 6811 1 chr2A.!!$R1 3688
9 TraesCS5A01G004500 chr6A 242533226 242536912 3686 True 6309.000 6309 97.56000 3123 6808 1 chr6A.!!$R3 3685
10 TraesCS5A01G004500 chr6A 22782147 22785834 3687 False 6301.000 6301 97.50700 3120 6808 1 chr6A.!!$F2 3688
11 TraesCS5A01G004500 chr7A 2348935 2352622 3687 True 6305.000 6305 97.53300 3123 6808 1 chr7A.!!$R1 3685
12 TraesCS5A01G004500 chr7A 92780619 92784306 3687 False 6301.000 6301 97.50700 3120 6808 1 chr7A.!!$F2 3688
13 TraesCS5A01G004500 chr7A 30991563 30992095 532 True 979.000 979 99.81200 2591 3123 1 chr7A.!!$R2 532
14 TraesCS5A01G004500 chr5D 5367868 5369011 1143 False 1450.000 1450 89.52900 6827 7972 1 chr5D.!!$F1 1145
15 TraesCS5A01G004500 chr5D 6479864 6486382 6518 True 1054.275 2868 94.04875 54 8971 8 chr5D.!!$R1 8917
16 TraesCS5A01G004500 chr5B 6418377 6419433 1056 True 1040.000 1040 84.52200 6923 7981 1 chr5B.!!$R1 1058
17 TraesCS5A01G004500 chr7B 742560556 742561074 518 True 730.000 730 92.19000 2591 3107 1 chr7B.!!$R3 516
18 TraesCS5A01G004500 chr4D 207542777 207543306 529 True 710.000 710 90.82400 2587 3118 1 chr4D.!!$R2 531
19 TraesCS5A01G004500 chr4B 117780925 117781457 532 True 665.000 665 90.05600 2618 3123 1 chr4B.!!$R1 505


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
654 666 0.687354 CTTGGTACCCTGCACTCACT 59.313 55.000 10.07 0.00 0.00 3.41 F
1370 1388 0.170116 TGCGCGGATGTCCATTTTTC 59.830 50.000 8.83 0.00 35.14 2.29 F
2321 2349 0.035739 GGTCCTTTAGTGCCGGTTCA 59.964 55.000 1.90 0.00 0.00 3.18 F
2323 2351 0.323629 TCCTTTAGTGCCGGTTCAGG 59.676 55.000 1.90 0.40 0.00 3.86 F
2324 2352 0.323629 CCTTTAGTGCCGGTTCAGGA 59.676 55.000 1.90 0.00 0.00 3.86 F
2413 2441 0.458260 AAAAGGAAACCACGTGGCAC 59.542 50.000 34.26 23.29 39.32 5.01 F
2454 2482 0.616891 AGCCCTTTAGTACCGGTTGG 59.383 55.000 15.04 5.94 42.84 3.77 F
4666 4742 0.253327 GAATCTTCTTCCTGGGGCGT 59.747 55.000 0.00 0.00 0.00 5.68 F
5076 5152 1.135575 GCAGTTTCTCTTTGCATCGGG 60.136 52.381 0.00 0.00 37.75 5.14 F
5890 5969 1.609555 CGGTTGGAATTTCCGGTTCAA 59.390 47.619 10.79 0.00 40.17 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1475 1494 0.031994 GCACATGGCAAAAGGAACGT 59.968 50.000 0.00 0.00 43.97 3.99 R
2584 2612 0.032403 TTTAGCGCTACCGTGTGTGT 59.968 50.000 18.63 0.00 36.67 3.72 R
3658 3726 0.249398 GGAGGACCAGCAACGTATGT 59.751 55.000 0.00 0.00 35.97 2.29 R
4068 4143 1.355971 CACTGTTTGGACGATACCGG 58.644 55.000 0.00 0.00 40.78 5.28 R
4636 4712 3.054361 GGAAGAAGATTCCTGCCAAGGTA 60.054 47.826 0.00 0.00 44.82 3.08 R
4666 4742 3.458163 GGTGATGTCGAGGGCCGA 61.458 66.667 0.00 0.00 46.35 5.54 R
5076 5152 3.326006 TGATGATCTAGGTCAGGCCATTC 59.674 47.826 12.11 3.58 40.61 2.67 R
6818 6907 0.179070 GAGCTAGAGGCCCTTTTCGG 60.179 60.000 0.00 0.00 43.05 4.30 R
6819 6908 0.528684 CGAGCTAGAGGCCCTTTTCG 60.529 60.000 0.00 0.00 43.05 3.46 R
8449 8550 0.104304 CCACCATACGTGTCTAGGCC 59.896 60.000 0.00 0.00 41.26 5.19 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.850557 TGCCAATCTTCACTCAAAAGAAA 57.149 34.783 0.00 0.00 36.41 2.52
23 24 6.219417 TGCCAATCTTCACTCAAAAGAAAA 57.781 33.333 0.00 0.00 36.41 2.29
24 25 6.638610 TGCCAATCTTCACTCAAAAGAAAAA 58.361 32.000 0.00 0.00 36.41 1.94
44 45 4.647424 AAAAAGACTGTTGCCAATCGAA 57.353 36.364 0.00 0.00 0.00 3.71
45 46 3.626028 AAAGACTGTTGCCAATCGAAC 57.374 42.857 0.00 0.00 0.00 3.95
46 47 2.254546 AGACTGTTGCCAATCGAACA 57.745 45.000 0.00 0.00 0.00 3.18
47 48 2.783135 AGACTGTTGCCAATCGAACAT 58.217 42.857 0.00 0.00 31.81 2.71
48 49 2.485426 AGACTGTTGCCAATCGAACATG 59.515 45.455 0.00 0.00 31.81 3.21
49 50 1.068333 ACTGTTGCCAATCGAACATGC 60.068 47.619 0.00 0.00 31.81 4.06
50 51 0.957362 TGTTGCCAATCGAACATGCA 59.043 45.000 0.00 0.00 0.00 3.96
51 52 1.068402 TGTTGCCAATCGAACATGCAG 60.068 47.619 0.00 0.00 32.88 4.41
52 53 1.068333 GTTGCCAATCGAACATGCAGT 60.068 47.619 0.00 0.00 32.88 4.40
126 127 1.824230 AGCAGCTAGAGTCTTGACCTG 59.176 52.381 5.73 5.49 0.00 4.00
175 176 2.164422 CTCAGCACGGTCTATCAGTCAA 59.836 50.000 0.00 0.00 0.00 3.18
266 267 5.299279 TGAGGTTTTTCAAAAGAGTAGGCAG 59.701 40.000 0.00 0.00 0.00 4.85
316 317 3.251729 CCCTCGATTCTGTGCAAATATGG 59.748 47.826 0.00 0.00 0.00 2.74
331 332 8.446273 GTGCAAATATGGTGAGCTACATAATAG 58.554 37.037 8.70 4.35 33.69 1.73
342 343 7.169982 GTGAGCTACATAATAGTTAGGCACTTG 59.830 40.741 0.00 0.00 41.75 3.16
370 371 6.013293 ACCTTTCAGTGCTATTTTCTCCTAGT 60.013 38.462 0.00 0.00 0.00 2.57
480 481 7.490402 ACTGAAAAGAGTCAAAGCTCAATTTTG 59.510 33.333 0.00 0.00 37.94 2.44
592 593 6.351117 CCCAAACTGTTACTACTAGCTAGCTT 60.351 42.308 24.88 8.55 0.00 3.74
593 594 6.531948 CCAAACTGTTACTACTAGCTAGCTTG 59.468 42.308 24.88 23.43 0.00 4.01
594 595 5.251601 ACTGTTACTACTAGCTAGCTTGC 57.748 43.478 24.88 12.54 0.00 4.01
635 647 9.627395 CTGGTATAACAGTTAGTCATACATAGC 57.373 37.037 9.80 0.00 33.81 2.97
642 654 7.490000 ACAGTTAGTCATACATAGCTTGGTAC 58.510 38.462 0.00 0.00 0.00 3.34
646 658 4.345257 AGTCATACATAGCTTGGTACCCTG 59.655 45.833 10.07 2.97 0.00 4.45
647 659 3.071023 TCATACATAGCTTGGTACCCTGC 59.929 47.826 10.07 13.53 0.00 4.85
648 660 1.285280 ACATAGCTTGGTACCCTGCA 58.715 50.000 22.69 12.39 0.00 4.41
650 662 1.210478 CATAGCTTGGTACCCTGCACT 59.790 52.381 22.69 10.84 0.00 4.40
652 664 1.127567 AGCTTGGTACCCTGCACTCA 61.128 55.000 22.69 0.00 0.00 3.41
654 666 0.687354 CTTGGTACCCTGCACTCACT 59.313 55.000 10.07 0.00 0.00 3.41
736 752 4.070552 GGCGCTGAGGACGGTTCT 62.071 66.667 7.64 0.00 0.00 3.01
743 759 3.550678 CGCTGAGGACGGTTCTAATTTAC 59.449 47.826 0.00 0.00 0.00 2.01
747 763 5.345702 TGAGGACGGTTCTAATTTACGATG 58.654 41.667 0.00 0.00 0.00 3.84
748 764 4.117685 AGGACGGTTCTAATTTACGATGC 58.882 43.478 0.00 0.00 0.00 3.91
749 765 4.117685 GGACGGTTCTAATTTACGATGCT 58.882 43.478 0.00 0.00 0.00 3.79
750 766 5.068198 AGGACGGTTCTAATTTACGATGCTA 59.932 40.000 0.00 0.00 0.00 3.49
751 767 5.174579 GGACGGTTCTAATTTACGATGCTAC 59.825 44.000 0.00 0.00 0.00 3.58
752 768 5.653507 ACGGTTCTAATTTACGATGCTACA 58.346 37.500 0.00 0.00 0.00 2.74
753 769 6.278363 ACGGTTCTAATTTACGATGCTACAT 58.722 36.000 0.00 0.00 0.00 2.29
754 770 6.200286 ACGGTTCTAATTTACGATGCTACATG 59.800 38.462 0.00 0.00 0.00 3.21
755 771 6.419710 CGGTTCTAATTTACGATGCTACATGA 59.580 38.462 0.00 0.00 0.00 3.07
756 772 7.116376 CGGTTCTAATTTACGATGCTACATGAT 59.884 37.037 0.00 0.00 0.00 2.45
757 773 9.419297 GGTTCTAATTTACGATGCTACATGATA 57.581 33.333 0.00 0.00 0.00 2.15
782 798 6.985653 ATATATGTGAGACACTAACCAGCT 57.014 37.500 0.00 0.00 35.11 4.24
783 799 9.755122 ATATATATGTGAGACACTAACCAGCTA 57.245 33.333 0.00 0.00 35.11 3.32
784 800 4.727507 ATGTGAGACACTAACCAGCTAG 57.272 45.455 0.00 0.00 35.11 3.42
785 801 2.231478 TGTGAGACACTAACCAGCTAGC 59.769 50.000 6.62 6.62 35.11 3.42
786 802 2.231478 GTGAGACACTAACCAGCTAGCA 59.769 50.000 18.83 0.00 0.00 3.49
787 803 2.493675 TGAGACACTAACCAGCTAGCAG 59.506 50.000 18.83 9.15 0.00 4.24
788 804 1.827969 AGACACTAACCAGCTAGCAGG 59.172 52.381 23.56 23.56 0.00 4.85
789 805 1.550976 GACACTAACCAGCTAGCAGGT 59.449 52.381 24.98 24.98 37.43 4.00
790 806 2.758979 GACACTAACCAGCTAGCAGGTA 59.241 50.000 29.74 16.10 34.64 3.08
791 807 2.761208 ACACTAACCAGCTAGCAGGTAG 59.239 50.000 29.74 25.32 34.64 3.18
792 808 2.761208 CACTAACCAGCTAGCAGGTAGT 59.239 50.000 29.74 25.92 34.64 2.73
793 809 3.952323 CACTAACCAGCTAGCAGGTAGTA 59.048 47.826 29.74 18.78 34.64 1.82
794 810 4.585162 CACTAACCAGCTAGCAGGTAGTAT 59.415 45.833 29.74 17.64 34.64 2.12
795 811 5.768662 CACTAACCAGCTAGCAGGTAGTATA 59.231 44.000 29.74 17.81 34.64 1.47
796 812 5.769162 ACTAACCAGCTAGCAGGTAGTATAC 59.231 44.000 29.74 0.00 42.04 1.47
797 813 4.180377 ACCAGCTAGCAGGTAGTATACA 57.820 45.455 28.67 0.00 45.43 2.29
798 814 4.742012 ACCAGCTAGCAGGTAGTATACAT 58.258 43.478 28.67 2.11 45.43 2.29
799 815 5.888901 ACCAGCTAGCAGGTAGTATACATA 58.111 41.667 28.67 0.00 45.43 2.29
800 816 5.711036 ACCAGCTAGCAGGTAGTATACATAC 59.289 44.000 28.67 5.02 45.43 2.39
801 817 5.710567 CCAGCTAGCAGGTAGTATACATACA 59.289 44.000 18.83 0.00 45.43 2.29
802 818 6.349445 CCAGCTAGCAGGTAGTATACATACAC 60.349 46.154 18.83 0.00 45.43 2.90
803 819 6.431543 CAGCTAGCAGGTAGTATACATACACT 59.568 42.308 18.83 6.46 45.43 3.55
804 820 6.655848 AGCTAGCAGGTAGTATACATACACTC 59.344 42.308 18.83 0.00 45.43 3.51
805 821 6.430308 GCTAGCAGGTAGTATACATACACTCA 59.570 42.308 10.63 0.00 45.43 3.41
806 822 7.121463 GCTAGCAGGTAGTATACATACACTCAT 59.879 40.741 10.63 0.00 45.43 2.90
807 823 7.220741 AGCAGGTAGTATACATACACTCATG 57.779 40.000 5.50 0.00 45.43 3.07
808 824 7.004691 AGCAGGTAGTATACATACACTCATGA 58.995 38.462 5.50 0.00 45.43 3.07
917 933 6.584185 TTAATTTTAACTTGCCAGGTCTCC 57.416 37.500 0.00 0.00 0.00 3.71
921 937 4.755266 TTAACTTGCCAGGTCTCCTATC 57.245 45.455 0.00 0.00 29.64 2.08
932 948 2.287909 GGTCTCCTATCTGCACGCTAAG 60.288 54.545 0.00 0.00 0.00 2.18
945 961 2.157668 CACGCTAAGTTGCTTCACGATT 59.842 45.455 9.39 0.00 0.00 3.34
1013 1030 2.974794 TCAGCTGCATGATATGGTACCT 59.025 45.455 14.36 1.08 0.00 3.08
1015 1032 3.501062 CAGCTGCATGATATGGTACCTTG 59.499 47.826 14.36 2.72 0.00 3.61
1016 1033 3.137176 AGCTGCATGATATGGTACCTTGT 59.863 43.478 14.36 4.94 0.00 3.16
1075 1092 5.359194 TGTAAGCCAAGCTAGCTAGATTT 57.641 39.130 25.15 14.16 40.49 2.17
1265 1283 8.672815 AGTGTATAAAAGGACTTCTAGTCGTAC 58.327 37.037 2.84 0.00 45.96 3.67
1296 1314 8.943002 AGTTTAACGAAAATGATAAGTACCTGG 58.057 33.333 0.00 0.00 0.00 4.45
1333 1351 5.567552 CACATGGCAAAACAAACGATTTTT 58.432 33.333 0.00 0.00 0.00 1.94
1336 1354 7.320797 CACATGGCAAAACAAACGATTTTTATG 59.679 33.333 0.00 0.00 0.00 1.90
1344 1362 9.794685 AAAACAAACGATTTTTATGGCAATTTT 57.205 22.222 0.00 0.00 0.00 1.82
1355 1373 2.605030 TGGCAATTTTAGTTGATGCGC 58.395 42.857 0.00 0.00 37.88 6.09
1361 1379 1.732941 TTTAGTTGATGCGCGGATGT 58.267 45.000 20.78 0.00 0.00 3.06
1370 1388 0.170116 TGCGCGGATGTCCATTTTTC 59.830 50.000 8.83 0.00 35.14 2.29
1381 1400 5.843673 TGTCCATTTTTCTTACAAGCACA 57.156 34.783 0.00 0.00 0.00 4.57
1382 1401 5.830912 TGTCCATTTTTCTTACAAGCACAG 58.169 37.500 0.00 0.00 0.00 3.66
1408 1427 9.208022 GCAATTTTCCTAGCAAAAAGATAAACT 57.792 29.630 0.00 0.00 0.00 2.66
1415 1434 9.436957 TCCTAGCAAAAAGATAAACTAAGACAG 57.563 33.333 0.00 0.00 0.00 3.51
1447 1466 2.008242 TGCCCACTAAACTTGCCATT 57.992 45.000 0.00 0.00 0.00 3.16
1463 1482 9.995003 AACTTGCCATTCTCAACAAATATAAAA 57.005 25.926 0.00 0.00 0.00 1.52
1466 1485 9.941325 TTGCCATTCTCAACAAATATAAAATGT 57.059 25.926 0.00 0.00 0.00 2.71
1506 1525 0.320334 CCATGTGCACGTACCTGACA 60.320 55.000 12.10 0.00 0.00 3.58
1532 1551 7.918076 TCAGGTACTTTATCAGATTCCAAGTT 58.082 34.615 7.35 0.00 34.60 2.66
1615 1634 9.923143 GCATGGTGTACAATATATACTCTAACA 57.077 33.333 0.00 0.00 0.00 2.41
1680 1699 6.805016 AGTCAATCCAACTCATAGAGATGT 57.195 37.500 0.31 0.00 31.83 3.06
1830 1855 5.182760 GTCACCAAGATTTCAAGAGCAAGAT 59.817 40.000 0.00 0.00 0.00 2.40
1919 1944 7.627311 TCCTCAAACTATTACCTACCCTTTTC 58.373 38.462 0.00 0.00 0.00 2.29
1941 1966 0.251916 CAAGGGTCTACCGGCAATGA 59.748 55.000 0.00 0.00 46.96 2.57
2009 2037 5.063204 TCATTTGGAGTGAAGGTAACACTG 58.937 41.667 0.00 0.00 46.57 3.66
2258 2286 3.577389 GGCTGTGCCCTTACTCATT 57.423 52.632 0.00 0.00 44.06 2.57
2265 2293 5.449177 GCTGTGCCCTTACTCATTTGTTATC 60.449 44.000 0.00 0.00 0.00 1.75
2266 2294 5.565509 TGTGCCCTTACTCATTTGTTATCA 58.434 37.500 0.00 0.00 0.00 2.15
2267 2295 5.414454 TGTGCCCTTACTCATTTGTTATCAC 59.586 40.000 0.00 0.00 0.00 3.06
2269 2297 6.821665 GTGCCCTTACTCATTTGTTATCACTA 59.178 38.462 0.00 0.00 0.00 2.74
2270 2298 7.011482 GTGCCCTTACTCATTTGTTATCACTAG 59.989 40.741 0.00 0.00 0.00 2.57
2271 2299 7.048512 GCCCTTACTCATTTGTTATCACTAGT 58.951 38.462 0.00 0.00 0.00 2.57
2272 2300 7.011482 GCCCTTACTCATTTGTTATCACTAGTG 59.989 40.741 17.17 17.17 0.00 2.74
2275 2303 6.974932 ACTCATTTGTTATCACTAGTGCAG 57.025 37.500 18.45 0.00 0.00 4.41
2276 2304 6.701340 ACTCATTTGTTATCACTAGTGCAGA 58.299 36.000 18.45 6.00 0.00 4.26
2277 2305 7.161404 ACTCATTTGTTATCACTAGTGCAGAA 58.839 34.615 18.45 8.68 0.00 3.02
2278 2306 7.118390 ACTCATTTGTTATCACTAGTGCAGAAC 59.882 37.037 18.45 19.03 0.00 3.01
2279 2307 6.371548 TCATTTGTTATCACTAGTGCAGAACC 59.628 38.462 18.45 4.37 0.00 3.62
2280 2308 3.845178 TGTTATCACTAGTGCAGAACCG 58.155 45.455 18.45 0.00 0.00 4.44
2281 2309 3.187700 GTTATCACTAGTGCAGAACCGG 58.812 50.000 18.45 0.00 0.00 5.28
2282 2310 0.537188 ATCACTAGTGCAGAACCGGG 59.463 55.000 18.45 0.00 0.00 5.73
2283 2311 1.741770 CACTAGTGCAGAACCGGGC 60.742 63.158 10.54 0.00 0.00 6.13
2284 2312 2.214216 ACTAGTGCAGAACCGGGCA 61.214 57.895 6.32 1.81 37.77 5.36
2285 2313 1.003839 CTAGTGCAGAACCGGGCAA 60.004 57.895 6.32 0.00 42.45 4.52
2286 2314 0.392998 CTAGTGCAGAACCGGGCAAT 60.393 55.000 6.32 7.58 42.45 3.56
2287 2315 0.906066 TAGTGCAGAACCGGGCAATA 59.094 50.000 6.32 6.43 42.45 1.90
2288 2316 0.392998 AGTGCAGAACCGGGCAATAG 60.393 55.000 6.32 0.00 42.45 1.73
2289 2317 1.748879 TGCAGAACCGGGCAATAGC 60.749 57.895 6.32 2.35 37.03 2.97
2290 2318 1.748879 GCAGAACCGGGCAATAGCA 60.749 57.895 6.32 0.00 44.61 3.49
2291 2319 1.993369 GCAGAACCGGGCAATAGCAC 61.993 60.000 6.32 0.00 44.61 4.40
2292 2320 1.077716 AGAACCGGGCAATAGCACC 60.078 57.895 6.32 0.00 42.77 5.01
2298 2326 1.941812 GGGCAATAGCACCGATTCG 59.058 57.895 0.00 0.00 44.61 3.34
2299 2327 0.814010 GGGCAATAGCACCGATTCGT 60.814 55.000 5.20 0.00 44.61 3.85
2300 2328 1.539496 GGGCAATAGCACCGATTCGTA 60.539 52.381 5.20 0.00 44.61 3.43
2301 2329 2.206750 GGCAATAGCACCGATTCGTAA 58.793 47.619 5.20 0.00 44.61 3.18
2302 2330 2.221055 GGCAATAGCACCGATTCGTAAG 59.779 50.000 5.20 0.00 44.61 2.34
2303 2331 2.221055 GCAATAGCACCGATTCGTAAGG 59.779 50.000 5.20 0.00 41.58 2.69
2304 2332 3.454375 CAATAGCACCGATTCGTAAGGT 58.546 45.455 5.20 2.88 39.12 3.50
2305 2333 2.857592 TAGCACCGATTCGTAAGGTC 57.142 50.000 5.20 0.00 35.85 3.85
2306 2334 0.175073 AGCACCGATTCGTAAGGTCC 59.825 55.000 5.20 0.00 35.85 4.46
2307 2335 0.175073 GCACCGATTCGTAAGGTCCT 59.825 55.000 5.20 0.00 35.85 3.85
2308 2336 1.405121 GCACCGATTCGTAAGGTCCTT 60.405 52.381 9.62 9.62 35.85 3.36
2309 2337 2.933928 GCACCGATTCGTAAGGTCCTTT 60.934 50.000 10.04 0.00 35.85 3.11
2310 2338 3.676873 GCACCGATTCGTAAGGTCCTTTA 60.677 47.826 10.04 0.00 35.85 1.85
2311 2339 4.110482 CACCGATTCGTAAGGTCCTTTAG 58.890 47.826 10.04 4.60 35.85 1.85
2312 2340 3.766051 ACCGATTCGTAAGGTCCTTTAGT 59.234 43.478 10.04 0.00 31.69 2.24
2313 2341 4.110482 CCGATTCGTAAGGTCCTTTAGTG 58.890 47.826 10.04 0.00 38.47 2.74
2314 2342 3.550678 CGATTCGTAAGGTCCTTTAGTGC 59.449 47.826 10.04 0.00 38.47 4.40
2315 2343 3.323751 TTCGTAAGGTCCTTTAGTGCC 57.676 47.619 10.04 0.00 38.47 5.01
2316 2344 1.203052 TCGTAAGGTCCTTTAGTGCCG 59.797 52.381 10.04 3.70 38.47 5.69
2317 2345 1.738030 CGTAAGGTCCTTTAGTGCCGG 60.738 57.143 10.04 0.00 0.00 6.13
2318 2346 1.277273 GTAAGGTCCTTTAGTGCCGGT 59.723 52.381 10.04 0.00 0.00 5.28
2319 2347 0.769247 AAGGTCCTTTAGTGCCGGTT 59.231 50.000 1.90 0.00 0.00 4.44
2320 2348 0.323957 AGGTCCTTTAGTGCCGGTTC 59.676 55.000 1.90 0.00 0.00 3.62
2321 2349 0.035739 GGTCCTTTAGTGCCGGTTCA 59.964 55.000 1.90 0.00 0.00 3.18
2322 2350 1.439679 GTCCTTTAGTGCCGGTTCAG 58.560 55.000 1.90 0.00 0.00 3.02
2323 2351 0.323629 TCCTTTAGTGCCGGTTCAGG 59.676 55.000 1.90 0.40 0.00 3.86
2324 2352 0.323629 CCTTTAGTGCCGGTTCAGGA 59.676 55.000 1.90 0.00 0.00 3.86
2325 2353 1.271163 CCTTTAGTGCCGGTTCAGGAA 60.271 52.381 1.90 0.00 0.00 3.36
2326 2354 1.804748 CTTTAGTGCCGGTTCAGGAAC 59.195 52.381 1.90 3.58 40.25 3.62
2339 2367 5.453567 GTTCAGGAACCAGCATTAAAGTT 57.546 39.130 0.64 0.00 35.36 2.66
2340 2368 5.842907 GTTCAGGAACCAGCATTAAAGTTT 58.157 37.500 0.64 0.00 35.36 2.66
2341 2369 5.705609 TCAGGAACCAGCATTAAAGTTTC 57.294 39.130 0.00 0.00 0.00 2.78
2342 2370 4.215399 TCAGGAACCAGCATTAAAGTTTCG 59.785 41.667 0.00 0.00 0.00 3.46
2343 2371 3.506067 AGGAACCAGCATTAAAGTTTCGG 59.494 43.478 0.00 0.00 0.00 4.30
2344 2372 3.242518 GAACCAGCATTAAAGTTTCGGC 58.757 45.455 0.00 0.00 0.00 5.54
2345 2373 2.235016 ACCAGCATTAAAGTTTCGGCA 58.765 42.857 0.00 0.00 0.00 5.69
2346 2374 2.030274 ACCAGCATTAAAGTTTCGGCAC 60.030 45.455 0.00 0.00 0.00 5.01
2347 2375 2.228822 CCAGCATTAAAGTTTCGGCACT 59.771 45.455 0.00 0.00 0.00 4.40
2348 2376 3.438781 CCAGCATTAAAGTTTCGGCACTA 59.561 43.478 0.00 0.00 0.00 2.74
2349 2377 4.083003 CCAGCATTAAAGTTTCGGCACTAA 60.083 41.667 0.00 0.00 0.00 2.24
2350 2378 5.457140 CAGCATTAAAGTTTCGGCACTAAA 58.543 37.500 0.00 0.00 0.00 1.85
2351 2379 5.569059 CAGCATTAAAGTTTCGGCACTAAAG 59.431 40.000 0.00 0.00 0.00 1.85
2352 2380 4.857037 GCATTAAAGTTTCGGCACTAAAGG 59.143 41.667 0.00 0.00 0.00 3.11
2353 2381 4.492791 TTAAAGTTTCGGCACTAAAGGC 57.507 40.909 0.00 0.00 0.00 4.35
2378 2406 1.278537 CCCCCTTTAGTACCGGTTCA 58.721 55.000 15.04 0.00 0.00 3.18
2379 2407 1.208776 CCCCCTTTAGTACCGGTTCAG 59.791 57.143 15.04 0.52 0.00 3.02
2380 2408 1.406477 CCCCTTTAGTACCGGTTCAGC 60.406 57.143 15.04 0.59 0.00 4.26
2381 2409 1.276989 CCCTTTAGTACCGGTTCAGCA 59.723 52.381 15.04 0.00 0.00 4.41
2382 2410 2.093128 CCCTTTAGTACCGGTTCAGCAT 60.093 50.000 15.04 0.00 0.00 3.79
2383 2411 2.936498 CCTTTAGTACCGGTTCAGCATG 59.064 50.000 15.04 0.00 37.54 4.06
2398 2426 2.262572 GCATGAACCGGTGCTAAAAG 57.737 50.000 15.35 0.00 38.30 2.27
2399 2427 1.135402 GCATGAACCGGTGCTAAAAGG 60.135 52.381 15.35 0.00 38.30 3.11
2400 2428 2.432444 CATGAACCGGTGCTAAAAGGA 58.568 47.619 15.35 0.00 0.00 3.36
2401 2429 2.642154 TGAACCGGTGCTAAAAGGAA 57.358 45.000 15.35 0.00 0.00 3.36
2402 2430 2.933573 TGAACCGGTGCTAAAAGGAAA 58.066 42.857 15.35 0.00 0.00 3.13
2403 2431 2.619646 TGAACCGGTGCTAAAAGGAAAC 59.380 45.455 15.35 0.00 0.00 2.78
2404 2432 1.612676 ACCGGTGCTAAAAGGAAACC 58.387 50.000 6.12 0.00 0.00 3.27
2405 2433 1.133730 ACCGGTGCTAAAAGGAAACCA 60.134 47.619 6.12 0.00 0.00 3.67
2406 2434 1.268625 CCGGTGCTAAAAGGAAACCAC 59.731 52.381 0.00 0.00 0.00 4.16
2407 2435 1.069500 CGGTGCTAAAAGGAAACCACG 60.069 52.381 0.00 0.00 0.00 4.94
2408 2436 1.951602 GGTGCTAAAAGGAAACCACGT 59.048 47.619 0.00 0.00 0.00 4.49
2409 2437 2.287368 GGTGCTAAAAGGAAACCACGTG 60.287 50.000 9.08 9.08 0.00 4.49
2410 2438 1.950909 TGCTAAAAGGAAACCACGTGG 59.049 47.619 32.83 32.83 42.17 4.94
2411 2439 1.335597 GCTAAAAGGAAACCACGTGGC 60.336 52.381 34.26 18.01 39.32 5.01
2412 2440 1.950909 CTAAAAGGAAACCACGTGGCA 59.049 47.619 34.26 7.30 39.32 4.92
2413 2441 0.458260 AAAAGGAAACCACGTGGCAC 59.542 50.000 34.26 23.29 39.32 5.01
2415 2443 2.589442 GGAAACCACGTGGCACGA 60.589 61.111 42.65 0.00 46.05 4.35
2416 2444 2.604174 GGAAACCACGTGGCACGAG 61.604 63.158 42.65 34.61 46.05 4.18
2417 2445 1.885850 GAAACCACGTGGCACGAGT 60.886 57.895 42.65 33.51 46.05 4.18
2418 2446 1.828331 GAAACCACGTGGCACGAGTC 61.828 60.000 42.65 25.09 46.05 3.36
2419 2447 2.581208 AAACCACGTGGCACGAGTCA 62.581 55.000 42.65 0.00 46.05 3.41
2420 2448 2.734723 CCACGTGGCACGAGTCAG 60.735 66.667 42.65 25.00 46.05 3.51
2421 2449 3.406361 CACGTGGCACGAGTCAGC 61.406 66.667 42.65 1.70 46.05 4.26
2422 2450 3.606662 ACGTGGCACGAGTCAGCT 61.607 61.111 42.65 18.80 46.05 4.24
2423 2451 2.807045 CGTGGCACGAGTCAGCTC 60.807 66.667 34.85 0.00 46.05 4.09
2424 2452 2.433318 GTGGCACGAGTCAGCTCC 60.433 66.667 0.00 0.00 38.49 4.70
2425 2453 4.056125 TGGCACGAGTCAGCTCCG 62.056 66.667 4.76 0.00 38.49 4.63
2426 2454 4.803426 GGCACGAGTCAGCTCCGG 62.803 72.222 0.00 0.00 38.49 5.14
2427 2455 4.803426 GCACGAGTCAGCTCCGGG 62.803 72.222 0.00 0.00 38.49 5.73
2428 2456 4.135153 CACGAGTCAGCTCCGGGG 62.135 72.222 0.00 0.00 38.49 5.73
2446 2474 3.638132 GCCGGGAGCCCTTTAGTA 58.362 61.111 2.18 0.00 34.35 1.82
2447 2475 1.145598 GCCGGGAGCCCTTTAGTAC 59.854 63.158 2.18 0.00 34.35 2.73
2448 2476 1.828081 CCGGGAGCCCTTTAGTACC 59.172 63.158 3.70 0.00 0.00 3.34
2449 2477 1.440476 CGGGAGCCCTTTAGTACCG 59.560 63.158 3.70 0.00 0.00 4.02
2450 2478 1.828081 GGGAGCCCTTTAGTACCGG 59.172 63.158 0.00 0.00 0.00 5.28
2451 2479 0.979709 GGGAGCCCTTTAGTACCGGT 60.980 60.000 13.98 13.98 0.00 5.28
2452 2480 0.907486 GGAGCCCTTTAGTACCGGTT 59.093 55.000 15.04 0.00 0.00 4.44
2453 2481 1.406477 GGAGCCCTTTAGTACCGGTTG 60.406 57.143 15.04 0.00 0.00 3.77
2454 2482 0.616891 AGCCCTTTAGTACCGGTTGG 59.383 55.000 15.04 5.94 42.84 3.77
2477 2505 8.203937 TGGTAACATCAATCGGTACTAAAATG 57.796 34.615 0.00 0.00 46.17 2.32
2478 2506 7.825270 TGGTAACATCAATCGGTACTAAAATGT 59.175 33.333 0.00 0.00 46.17 2.71
2479 2507 8.671028 GGTAACATCAATCGGTACTAAAATGTT 58.329 33.333 12.73 12.73 38.96 2.71
2481 2509 8.964420 AACATCAATCGGTACTAAAATGTTTG 57.036 30.769 0.00 0.00 33.58 2.93
2482 2510 7.535139 ACATCAATCGGTACTAAAATGTTTGG 58.465 34.615 0.00 0.00 0.00 3.28
2483 2511 6.503589 TCAATCGGTACTAAAATGTTTGGG 57.496 37.500 0.00 0.00 0.00 4.12
2484 2512 5.416326 TCAATCGGTACTAAAATGTTTGGGG 59.584 40.000 0.00 0.00 0.00 4.96
2485 2513 3.688235 TCGGTACTAAAATGTTTGGGGG 58.312 45.455 0.00 0.00 0.00 5.40
2486 2514 3.074242 TCGGTACTAAAATGTTTGGGGGT 59.926 43.478 0.00 0.00 0.00 4.95
2487 2515 3.827876 CGGTACTAAAATGTTTGGGGGTT 59.172 43.478 0.00 0.00 0.00 4.11
2488 2516 4.281435 CGGTACTAAAATGTTTGGGGGTTT 59.719 41.667 0.00 0.00 0.00 3.27
2489 2517 5.221481 CGGTACTAAAATGTTTGGGGGTTTT 60.221 40.000 0.00 0.00 0.00 2.43
2490 2518 6.593807 GGTACTAAAATGTTTGGGGGTTTTT 58.406 36.000 0.00 0.00 0.00 1.94
2491 2519 6.483974 GGTACTAAAATGTTTGGGGGTTTTTG 59.516 38.462 0.00 0.00 0.00 2.44
2492 2520 5.441500 ACTAAAATGTTTGGGGGTTTTTGG 58.558 37.500 0.00 0.00 0.00 3.28
2493 2521 4.323569 AAAATGTTTGGGGGTTTTTGGT 57.676 36.364 0.00 0.00 0.00 3.67
2494 2522 4.323569 AAATGTTTGGGGGTTTTTGGTT 57.676 36.364 0.00 0.00 0.00 3.67
2495 2523 4.323569 AATGTTTGGGGGTTTTTGGTTT 57.676 36.364 0.00 0.00 0.00 3.27
2496 2524 3.808834 TGTTTGGGGGTTTTTGGTTTT 57.191 38.095 0.00 0.00 0.00 2.43
2497 2525 4.921644 TGTTTGGGGGTTTTTGGTTTTA 57.078 36.364 0.00 0.00 0.00 1.52
2498 2526 5.452341 TGTTTGGGGGTTTTTGGTTTTAT 57.548 34.783 0.00 0.00 0.00 1.40
2499 2527 5.193679 TGTTTGGGGGTTTTTGGTTTTATG 58.806 37.500 0.00 0.00 0.00 1.90
2500 2528 5.045140 TGTTTGGGGGTTTTTGGTTTTATGA 60.045 36.000 0.00 0.00 0.00 2.15
2501 2529 5.913946 TTGGGGGTTTTTGGTTTTATGAT 57.086 34.783 0.00 0.00 0.00 2.45
2502 2530 5.913946 TGGGGGTTTTTGGTTTTATGATT 57.086 34.783 0.00 0.00 0.00 2.57
2503 2531 6.267492 TGGGGGTTTTTGGTTTTATGATTT 57.733 33.333 0.00 0.00 0.00 2.17
2504 2532 6.673583 TGGGGGTTTTTGGTTTTATGATTTT 58.326 32.000 0.00 0.00 0.00 1.82
2505 2533 7.126061 TGGGGGTTTTTGGTTTTATGATTTTT 58.874 30.769 0.00 0.00 0.00 1.94
2554 2582 7.835634 TTTTAATTCTTTTTCGTTTGCTGGT 57.164 28.000 0.00 0.00 0.00 4.00
2555 2583 8.928270 TTTTAATTCTTTTTCGTTTGCTGGTA 57.072 26.923 0.00 0.00 0.00 3.25
2556 2584 9.535878 TTTTAATTCTTTTTCGTTTGCTGGTAT 57.464 25.926 0.00 0.00 0.00 2.73
2557 2585 9.535878 TTTAATTCTTTTTCGTTTGCTGGTATT 57.464 25.926 0.00 0.00 0.00 1.89
2558 2586 9.535878 TTAATTCTTTTTCGTTTGCTGGTATTT 57.464 25.926 0.00 0.00 0.00 1.40
2559 2587 8.432110 AATTCTTTTTCGTTTGCTGGTATTTT 57.568 26.923 0.00 0.00 0.00 1.82
2560 2588 9.535878 AATTCTTTTTCGTTTGCTGGTATTTTA 57.464 25.926 0.00 0.00 0.00 1.52
2561 2589 7.917720 TCTTTTTCGTTTGCTGGTATTTTAC 57.082 32.000 0.00 0.00 0.00 2.01
2562 2590 6.633634 TCTTTTTCGTTTGCTGGTATTTTACG 59.366 34.615 0.00 0.00 0.00 3.18
2563 2591 4.407496 TTCGTTTGCTGGTATTTTACGG 57.593 40.909 0.00 0.00 0.00 4.02
2564 2592 3.401182 TCGTTTGCTGGTATTTTACGGT 58.599 40.909 0.00 0.00 0.00 4.83
2565 2593 4.564041 TCGTTTGCTGGTATTTTACGGTA 58.436 39.130 0.00 0.00 0.00 4.02
2566 2594 4.388469 TCGTTTGCTGGTATTTTACGGTAC 59.612 41.667 0.00 0.00 0.00 3.34
2567 2595 4.389687 CGTTTGCTGGTATTTTACGGTACT 59.610 41.667 0.00 0.00 0.00 2.73
2568 2596 5.576384 CGTTTGCTGGTATTTTACGGTACTA 59.424 40.000 0.00 0.00 0.00 1.82
2569 2597 6.454186 CGTTTGCTGGTATTTTACGGTACTAC 60.454 42.308 0.00 0.00 0.00 2.73
2570 2598 5.657826 TGCTGGTATTTTACGGTACTACA 57.342 39.130 0.00 0.00 0.00 2.74
2571 2599 5.410067 TGCTGGTATTTTACGGTACTACAC 58.590 41.667 0.00 0.00 0.00 2.90
2572 2600 5.047448 TGCTGGTATTTTACGGTACTACACA 60.047 40.000 0.00 0.00 0.00 3.72
2573 2601 6.044682 GCTGGTATTTTACGGTACTACACAT 58.955 40.000 0.00 0.00 0.00 3.21
2574 2602 6.536224 GCTGGTATTTTACGGTACTACACATT 59.464 38.462 0.00 0.00 0.00 2.71
2575 2603 7.064966 GCTGGTATTTTACGGTACTACACATTT 59.935 37.037 0.00 0.00 0.00 2.32
2576 2604 8.845413 TGGTATTTTACGGTACTACACATTTT 57.155 30.769 0.00 0.00 0.00 1.82
2577 2605 9.935241 TGGTATTTTACGGTACTACACATTTTA 57.065 29.630 0.00 0.00 0.00 1.52
2579 2607 9.885743 GTATTTTACGGTACTACACATTTTACG 57.114 33.333 0.00 0.00 0.00 3.18
2580 2608 6.942886 TTTACGGTACTACACATTTTACGG 57.057 37.500 0.00 0.00 0.00 4.02
2581 2609 4.519540 ACGGTACTACACATTTTACGGT 57.480 40.909 0.00 0.00 0.00 4.83
2582 2610 5.637006 ACGGTACTACACATTTTACGGTA 57.363 39.130 0.00 0.00 0.00 4.02
2583 2611 5.399013 ACGGTACTACACATTTTACGGTAC 58.601 41.667 0.00 0.00 0.00 3.34
2584 2612 5.048364 ACGGTACTACACATTTTACGGTACA 60.048 40.000 0.00 0.00 32.44 2.90
2585 2613 5.286082 CGGTACTACACATTTTACGGTACAC 59.714 44.000 0.00 0.00 32.44 2.90
2586 2614 6.155827 GGTACTACACATTTTACGGTACACA 58.844 40.000 0.00 0.00 32.44 3.72
2587 2615 6.089417 GGTACTACACATTTTACGGTACACAC 59.911 42.308 0.00 0.00 32.44 3.82
2588 2616 5.599732 ACTACACATTTTACGGTACACACA 58.400 37.500 0.00 0.00 0.00 3.72
2589 2617 4.799419 ACACATTTTACGGTACACACAC 57.201 40.909 0.00 0.00 0.00 3.82
3126 3194 3.577415 GGCTATATAAGACCCTTCACGGT 59.423 47.826 0.00 0.00 39.49 4.83
3134 3202 1.057851 ACCCTTCACGGTCCTTGGAA 61.058 55.000 0.00 0.00 0.00 3.53
3173 3241 6.238648 GCCTAGCACGGTTATGAACATATTTT 60.239 38.462 0.00 0.00 0.00 1.82
3225 3293 8.502738 AGGGGAACATATTGTGTAGAAATACAT 58.497 33.333 0.00 0.00 41.14 2.29
3442 3510 0.683412 ACGTTTTCCGGTAGAAGCCT 59.317 50.000 0.00 0.00 42.24 4.58
3457 3525 1.377202 GCCTCCTCAATGCAACCGA 60.377 57.895 0.00 0.00 0.00 4.69
3581 3649 4.275810 ACGGTACCTTAATACTGAGCAGA 58.724 43.478 10.90 0.00 35.36 4.26
3658 3726 3.119065 TGATGTATGCCGTCTTTTCCGTA 60.119 43.478 0.00 0.00 0.00 4.02
3685 3753 3.322466 CTGGTCCTCCCGTGCCTT 61.322 66.667 0.00 0.00 35.15 4.35
3805 3873 2.158755 CGAGGTCTTTCCAATAGGGCAT 60.159 50.000 0.00 0.00 39.02 4.40
4277 4352 5.904984 ATGGCCTTAGGTACACATCAATA 57.095 39.130 3.32 0.00 0.00 1.90
4636 4712 7.568128 TGGTATTATAGGAGCATACCACATT 57.432 36.000 8.55 0.00 44.96 2.71
4666 4742 0.253327 GAATCTTCTTCCTGGGGCGT 59.747 55.000 0.00 0.00 0.00 5.68
5076 5152 1.135575 GCAGTTTCTCTTTGCATCGGG 60.136 52.381 0.00 0.00 37.75 5.14
5101 5177 2.435805 GGCCTGACCTAGATCATCAACA 59.564 50.000 0.00 0.00 34.51 3.33
5645 5724 3.868888 GATCAAGATCGCAACTAAGGC 57.131 47.619 0.00 0.00 0.00 4.35
5890 5969 1.609555 CGGTTGGAATTTCCGGTTCAA 59.390 47.619 10.79 0.00 40.17 2.69
5891 5970 2.606065 CGGTTGGAATTTCCGGTTCAAC 60.606 50.000 10.79 3.05 40.17 3.18
5901 5980 2.450476 TCCGGTTCAACTACCTCCTAC 58.550 52.381 0.00 0.00 35.97 3.18
5903 5982 2.764572 CCGGTTCAACTACCTCCTACAT 59.235 50.000 0.00 0.00 35.97 2.29
5905 5984 4.202090 CCGGTTCAACTACCTCCTACATAC 60.202 50.000 0.00 0.00 35.97 2.39
5910 5989 8.480501 GGTTCAACTACCTCCTACATACAAATA 58.519 37.037 0.00 0.00 35.23 1.40
5929 6008 7.934457 ACAAATATCTATGTCAACTTGATGGC 58.066 34.615 0.00 0.00 0.00 4.40
6388 6476 5.287674 TCTAGCAATGAGAGATGAAAGGG 57.712 43.478 0.00 0.00 0.00 3.95
6600 6688 2.303890 CAAGAACCGGTACTAAAGGGGT 59.696 50.000 8.00 0.00 0.00 4.95
6755 6844 3.830744 TGTATACATTAGTGCCGGCTT 57.169 42.857 29.70 18.41 0.00 4.35
6811 6900 9.281371 GTTTGACCCTTTTTCTACTAGTGTATT 57.719 33.333 5.39 0.00 0.00 1.89
6812 6901 9.856162 TTTGACCCTTTTTCTACTAGTGTATTT 57.144 29.630 5.39 0.00 0.00 1.40
6813 6902 9.856162 TTGACCCTTTTTCTACTAGTGTATTTT 57.144 29.630 5.39 0.00 0.00 1.82
6814 6903 9.856162 TGACCCTTTTTCTACTAGTGTATTTTT 57.144 29.630 5.39 0.00 0.00 1.94
6816 6905 8.573885 ACCCTTTTTCTACTAGTGTATTTTTGC 58.426 33.333 5.39 0.00 0.00 3.68
6817 6906 8.027189 CCCTTTTTCTACTAGTGTATTTTTGCC 58.973 37.037 5.39 0.00 0.00 4.52
6818 6907 8.027189 CCTTTTTCTACTAGTGTATTTTTGCCC 58.973 37.037 5.39 0.00 0.00 5.36
6819 6908 7.457024 TTTTCTACTAGTGTATTTTTGCCCC 57.543 36.000 5.39 0.00 0.00 5.80
6850 6939 2.478134 CTCTAGCTCGGTTTATGCATGC 59.522 50.000 11.82 11.82 0.00 4.06
6983 7080 4.222810 GGTTACTTTGCAAAATGGGGAGAT 59.777 41.667 13.84 0.00 0.00 2.75
7097 7194 5.952526 TGTTCGATGAAGTCTACACACTA 57.047 39.130 0.00 0.00 0.00 2.74
7127 7224 4.978099 AGATTGAAGACAATGGTGTGACT 58.022 39.130 0.00 0.00 45.30 3.41
7158 7255 4.446889 GCTTCTTGTTCCCATATCTCCCAT 60.447 45.833 0.00 0.00 0.00 4.00
7224 7321 4.452114 CACAAATCCTTTCTGATGTCGTCA 59.548 41.667 0.00 0.00 35.05 4.35
7571 7668 2.046023 CCAATGCTGGTCCGCAGA 60.046 61.111 12.72 0.00 44.10 4.26
7581 7678 0.175760 GGTCCGCAGAGCACATAAGA 59.824 55.000 0.00 0.00 40.37 2.10
7649 7746 0.249398 ACCACATCGTAGCAACTCCC 59.751 55.000 0.00 0.00 0.00 4.30
7733 7830 0.768622 TTGGCCCCGAAAGAAGAGAA 59.231 50.000 0.00 0.00 0.00 2.87
7977 8078 6.371548 TGTGCAGTCACTTAATTAGTTGATCC 59.628 38.462 0.00 0.00 43.49 3.36
8076 8177 0.886490 CGGACTTGGCTTTGAGTGCT 60.886 55.000 0.00 0.00 32.76 4.40
8291 8392 4.576463 CACTATTCACTACTGAAATGGCCC 59.424 45.833 0.00 0.00 39.90 5.80
8329 8430 0.534203 GTTGGACACTCGGCAAAGGA 60.534 55.000 0.00 0.00 0.00 3.36
8330 8431 0.400213 TTGGACACTCGGCAAAGGAT 59.600 50.000 0.00 0.00 0.00 3.24
8343 8444 3.561725 GGCAAAGGATCTCATAAACCGAG 59.438 47.826 0.00 0.00 0.00 4.63
8436 8537 1.503542 GCACTCGGCAAAGACATGG 59.496 57.895 0.00 0.00 43.97 3.66
8437 8538 0.955428 GCACTCGGCAAAGACATGGA 60.955 55.000 0.00 0.00 43.97 3.41
8438 8539 0.798776 CACTCGGCAAAGACATGGAC 59.201 55.000 0.00 0.00 0.00 4.02
8439 8540 0.687354 ACTCGGCAAAGACATGGACT 59.313 50.000 0.00 0.00 0.00 3.85
8440 8541 1.338200 ACTCGGCAAAGACATGGACTC 60.338 52.381 0.00 0.00 0.00 3.36
8441 8542 0.976641 TCGGCAAAGACATGGACTCT 59.023 50.000 0.00 0.00 0.00 3.24
8442 8543 1.066858 TCGGCAAAGACATGGACTCTC 60.067 52.381 0.00 0.00 0.00 3.20
8443 8544 1.363744 GGCAAAGACATGGACTCTCG 58.636 55.000 0.00 0.00 0.00 4.04
8444 8545 1.363744 GCAAAGACATGGACTCTCGG 58.636 55.000 0.00 0.00 0.00 4.63
8445 8546 1.363744 CAAAGACATGGACTCTCGGC 58.636 55.000 0.00 0.00 0.00 5.54
8446 8547 0.976641 AAAGACATGGACTCTCGGCA 59.023 50.000 0.00 0.00 0.00 5.69
8447 8548 0.976641 AAGACATGGACTCTCGGCAA 59.023 50.000 0.00 0.00 0.00 4.52
8448 8549 0.976641 AGACATGGACTCTCGGCAAA 59.023 50.000 0.00 0.00 0.00 3.68
8449 8550 1.066573 AGACATGGACTCTCGGCAAAG 60.067 52.381 0.00 0.00 0.00 2.77
8450 8551 0.036010 ACATGGACTCTCGGCAAAGG 60.036 55.000 0.00 0.00 0.00 3.11
8451 8552 1.078143 ATGGACTCTCGGCAAAGGC 60.078 57.895 0.00 0.00 40.13 4.35
8545 8646 5.089970 AGCATAATCTGTAGAAGTGTGCA 57.910 39.130 15.12 0.00 34.79 4.57
8546 8647 5.678583 AGCATAATCTGTAGAAGTGTGCAT 58.321 37.500 15.12 3.86 34.79 3.96
8586 8687 2.269241 CACGGCCTCTTTCTCCCC 59.731 66.667 0.00 0.00 0.00 4.81
8587 8688 3.391382 ACGGCCTCTTTCTCCCCG 61.391 66.667 0.00 0.00 44.19 5.73
8588 8689 3.075005 CGGCCTCTTTCTCCCCGA 61.075 66.667 0.00 0.00 41.34 5.14
8590 8691 1.915983 GGCCTCTTTCTCCCCGATT 59.084 57.895 0.00 0.00 0.00 3.34
8591 8692 1.129058 GGCCTCTTTCTCCCCGATTA 58.871 55.000 0.00 0.00 0.00 1.75
8594 8695 3.142174 GCCTCTTTCTCCCCGATTATTG 58.858 50.000 0.00 0.00 0.00 1.90
8596 8697 4.130118 CCTCTTTCTCCCCGATTATTGTG 58.870 47.826 0.00 0.00 0.00 3.33
8597 8698 4.384208 CCTCTTTCTCCCCGATTATTGTGT 60.384 45.833 0.00 0.00 0.00 3.72
8598 8699 5.174037 TCTTTCTCCCCGATTATTGTGTT 57.826 39.130 0.00 0.00 0.00 3.32
8599 8700 5.566469 TCTTTCTCCCCGATTATTGTGTTT 58.434 37.500 0.00 0.00 0.00 2.83
8601 8702 5.637006 TTCTCCCCGATTATTGTGTTTTG 57.363 39.130 0.00 0.00 0.00 2.44
8602 8703 3.442273 TCTCCCCGATTATTGTGTTTTGC 59.558 43.478 0.00 0.00 0.00 3.68
8603 8704 2.162608 TCCCCGATTATTGTGTTTTGCG 59.837 45.455 0.00 0.00 0.00 4.85
8604 8705 2.162608 CCCCGATTATTGTGTTTTGCGA 59.837 45.455 0.00 0.00 0.00 5.10
8605 8706 3.366476 CCCCGATTATTGTGTTTTGCGAA 60.366 43.478 0.00 0.00 0.00 4.70
8607 8708 4.862018 CCCGATTATTGTGTTTTGCGAATT 59.138 37.500 0.00 0.00 0.00 2.17
8608 8709 5.347364 CCCGATTATTGTGTTTTGCGAATTT 59.653 36.000 0.00 0.00 0.00 1.82
8611 8712 7.890717 CCGATTATTGTGTTTTGCGAATTTTAC 59.109 33.333 0.00 0.00 0.00 2.01
8612 8713 7.621567 CGATTATTGTGTTTTGCGAATTTTACG 59.378 33.333 0.00 0.00 0.00 3.18
8613 8714 7.909777 TTATTGTGTTTTGCGAATTTTACGA 57.090 28.000 0.00 0.00 0.00 3.43
8615 8716 5.607858 TGTGTTTTGCGAATTTTACGAAC 57.392 34.783 0.00 0.00 0.00 3.95
8616 8717 4.499758 TGTGTTTTGCGAATTTTACGAACC 59.500 37.500 0.00 0.00 0.00 3.62
8617 8718 4.499758 GTGTTTTGCGAATTTTACGAACCA 59.500 37.500 0.00 0.00 0.00 3.67
8618 8719 5.004535 GTGTTTTGCGAATTTTACGAACCAA 59.995 36.000 0.00 0.00 0.00 3.67
8619 8720 5.575606 TGTTTTGCGAATTTTACGAACCAAA 59.424 32.000 0.00 0.00 0.00 3.28
8620 8721 5.874892 TTTGCGAATTTTACGAACCAAAG 57.125 34.783 0.00 0.00 0.00 2.77
8621 8722 4.815040 TGCGAATTTTACGAACCAAAGA 57.185 36.364 0.00 0.00 0.00 2.52
8622 8723 4.778904 TGCGAATTTTACGAACCAAAGAG 58.221 39.130 0.00 0.00 0.00 2.85
8623 8724 4.156182 GCGAATTTTACGAACCAAAGAGG 58.844 43.478 0.00 0.00 45.67 3.69
8624 8725 4.156182 CGAATTTTACGAACCAAAGAGGC 58.844 43.478 0.00 0.00 43.14 4.70
8625 8726 4.482386 GAATTTTACGAACCAAAGAGGCC 58.518 43.478 0.00 0.00 43.14 5.19
8626 8727 1.900245 TTTACGAACCAAAGAGGCCC 58.100 50.000 0.00 0.00 43.14 5.80
8628 8729 1.941377 TACGAACCAAAGAGGCCCTA 58.059 50.000 0.00 0.00 43.14 3.53
8629 8730 1.286248 ACGAACCAAAGAGGCCCTAT 58.714 50.000 0.00 0.00 43.14 2.57
8630 8731 1.065418 ACGAACCAAAGAGGCCCTATG 60.065 52.381 0.00 0.00 43.14 2.23
8631 8732 1.393603 GAACCAAAGAGGCCCTATGC 58.606 55.000 0.00 0.00 43.14 3.14
8633 8734 0.929244 ACCAAAGAGGCCCTATGCAT 59.071 50.000 3.79 3.79 43.89 3.96
8634 8735 1.325355 CCAAAGAGGCCCTATGCATG 58.675 55.000 10.16 0.00 43.89 4.06
8635 8736 0.672342 CAAAGAGGCCCTATGCATGC 59.328 55.000 11.82 11.82 43.89 4.06
8636 8737 0.468771 AAAGAGGCCCTATGCATGCC 60.469 55.000 16.68 16.76 45.70 4.40
8637 8738 2.282745 GAGGCCCTATGCATGCCC 60.283 66.667 19.91 7.83 46.55 5.36
8639 8740 2.123338 GGCCCTATGCATGCCCAA 60.123 61.111 16.68 0.00 43.89 4.12
8640 8741 1.534717 GGCCCTATGCATGCCCAAT 60.535 57.895 16.68 4.59 43.89 3.16
8641 8742 1.123246 GGCCCTATGCATGCCCAATT 61.123 55.000 16.68 0.00 43.89 2.32
8642 8743 1.631405 GCCCTATGCATGCCCAATTA 58.369 50.000 16.68 0.00 40.77 1.40
8643 8744 2.181975 GCCCTATGCATGCCCAATTAT 58.818 47.619 16.68 2.96 40.77 1.28
8645 8746 3.768757 GCCCTATGCATGCCCAATTATTA 59.231 43.478 16.68 0.00 40.77 0.98
8686 8826 5.079406 CGCTGATTATTTACACACACACAC 58.921 41.667 0.00 0.00 0.00 3.82
8687 8827 5.333721 CGCTGATTATTTACACACACACACA 60.334 40.000 0.00 0.00 0.00 3.72
8688 8828 5.851177 GCTGATTATTTACACACACACACAC 59.149 40.000 0.00 0.00 0.00 3.82
8689 8829 6.512578 GCTGATTATTTACACACACACACACA 60.513 38.462 0.00 0.00 0.00 3.72
8690 8830 6.720343 TGATTATTTACACACACACACACAC 58.280 36.000 0.00 0.00 0.00 3.82
8718 8858 5.523588 AGAGAGAGAGAGAGAGAGAGAGAA 58.476 45.833 0.00 0.00 0.00 2.87
8719 8859 5.362430 AGAGAGAGAGAGAGAGAGAGAGAAC 59.638 48.000 0.00 0.00 0.00 3.01
8720 8860 5.026121 AGAGAGAGAGAGAGAGAGAGAACA 58.974 45.833 0.00 0.00 0.00 3.18
8721 8861 5.485353 AGAGAGAGAGAGAGAGAGAGAACAA 59.515 44.000 0.00 0.00 0.00 2.83
8722 8862 5.491982 AGAGAGAGAGAGAGAGAGAACAAC 58.508 45.833 0.00 0.00 0.00 3.32
8723 8863 5.013079 AGAGAGAGAGAGAGAGAGAACAACA 59.987 44.000 0.00 0.00 0.00 3.33
8724 8864 5.630121 AGAGAGAGAGAGAGAGAACAACAA 58.370 41.667 0.00 0.00 0.00 2.83
8725 8865 5.473504 AGAGAGAGAGAGAGAGAACAACAAC 59.526 44.000 0.00 0.00 0.00 3.32
8726 8866 5.136828 AGAGAGAGAGAGAGAACAACAACA 58.863 41.667 0.00 0.00 0.00 3.33
8727 8867 5.596361 AGAGAGAGAGAGAGAACAACAACAA 59.404 40.000 0.00 0.00 0.00 2.83
8728 8868 5.596845 AGAGAGAGAGAGAACAACAACAAC 58.403 41.667 0.00 0.00 0.00 3.32
8729 8869 5.127845 AGAGAGAGAGAGAACAACAACAACA 59.872 40.000 0.00 0.00 0.00 3.33
8730 8870 5.734720 AGAGAGAGAGAACAACAACAACAA 58.265 37.500 0.00 0.00 0.00 2.83
8731 8871 5.582665 AGAGAGAGAGAACAACAACAACAAC 59.417 40.000 0.00 0.00 0.00 3.32
8732 8872 5.245531 AGAGAGAGAACAACAACAACAACA 58.754 37.500 0.00 0.00 0.00 3.33
8733 8873 5.705441 AGAGAGAGAACAACAACAACAACAA 59.295 36.000 0.00 0.00 0.00 2.83
8734 8874 5.699839 AGAGAGAACAACAACAACAACAAC 58.300 37.500 0.00 0.00 0.00 3.32
8735 8875 5.240623 AGAGAGAACAACAACAACAACAACA 59.759 36.000 0.00 0.00 0.00 3.33
8736 8876 5.837437 AGAGAACAACAACAACAACAACAA 58.163 33.333 0.00 0.00 0.00 2.83
8737 8877 5.689961 AGAGAACAACAACAACAACAACAAC 59.310 36.000 0.00 0.00 0.00 3.32
8738 8878 5.352284 AGAACAACAACAACAACAACAACA 58.648 33.333 0.00 0.00 0.00 3.33
8739 8879 5.812642 AGAACAACAACAACAACAACAACAA 59.187 32.000 0.00 0.00 0.00 2.83
8740 8880 6.313905 AGAACAACAACAACAACAACAACAAA 59.686 30.769 0.00 0.00 0.00 2.83
8741 8881 6.042144 ACAACAACAACAACAACAACAAAG 57.958 33.333 0.00 0.00 0.00 2.77
8742 8882 4.723879 ACAACAACAACAACAACAAAGC 57.276 36.364 0.00 0.00 0.00 3.51
8743 8883 3.496507 ACAACAACAACAACAACAAAGCC 59.503 39.130 0.00 0.00 0.00 4.35
8744 8884 3.676291 ACAACAACAACAACAAAGCCT 57.324 38.095 0.00 0.00 0.00 4.58
8745 8885 4.001618 ACAACAACAACAACAAAGCCTT 57.998 36.364 0.00 0.00 0.00 4.35
8746 8886 4.384940 ACAACAACAACAACAAAGCCTTT 58.615 34.783 0.00 0.00 0.00 3.11
8747 8887 5.542779 ACAACAACAACAACAAAGCCTTTA 58.457 33.333 0.00 0.00 0.00 1.85
8748 8888 5.637387 ACAACAACAACAACAAAGCCTTTAG 59.363 36.000 0.00 0.00 0.00 1.85
8749 8889 5.400066 ACAACAACAACAAAGCCTTTAGT 57.600 34.783 0.00 0.00 0.00 2.24
8750 8890 5.407502 ACAACAACAACAAAGCCTTTAGTC 58.592 37.500 0.00 0.00 0.00 2.59
8751 8891 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
8752 8892 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
8753 8893 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
8754 8894 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
8755 8895 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
8756 8896 4.142026 ACAACAAAGCCTTTAGTCCCAAAC 60.142 41.667 0.00 0.00 0.00 2.93
8757 8897 3.637769 ACAAAGCCTTTAGTCCCAAACA 58.362 40.909 0.00 0.00 0.00 2.83
8758 8898 4.027437 ACAAAGCCTTTAGTCCCAAACAA 58.973 39.130 0.00 0.00 0.00 2.83
8759 8899 4.099419 ACAAAGCCTTTAGTCCCAAACAAG 59.901 41.667 0.00 0.00 0.00 3.16
8760 8900 3.595190 AGCCTTTAGTCCCAAACAAGT 57.405 42.857 0.00 0.00 0.00 3.16
8761 8901 3.910989 AGCCTTTAGTCCCAAACAAGTT 58.089 40.909 0.00 0.00 0.00 2.66
8762 8902 3.636764 AGCCTTTAGTCCCAAACAAGTTG 59.363 43.478 0.00 0.00 36.94 3.16
8771 8911 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
8772 8912 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
8824 8964 9.820229 TTGCTAGTTAAATTCATAGTCAAAACG 57.180 29.630 0.00 0.00 0.00 3.60
8825 8965 8.995220 TGCTAGTTAAATTCATAGTCAAAACGT 58.005 29.630 0.00 0.00 0.00 3.99
8826 8966 9.262472 GCTAGTTAAATTCATAGTCAAAACGTG 57.738 33.333 0.00 0.00 0.00 4.49
8827 8967 9.755064 CTAGTTAAATTCATAGTCAAAACGTGG 57.245 33.333 0.00 0.00 0.00 4.94
8828 8968 7.081976 AGTTAAATTCATAGTCAAAACGTGGC 58.918 34.615 0.00 0.00 0.00 5.01
8829 8969 4.434713 AATTCATAGTCAAAACGTGGCC 57.565 40.909 0.00 0.00 29.16 5.36
8830 8970 2.851263 TCATAGTCAAAACGTGGCCT 57.149 45.000 3.32 0.00 29.16 5.19
8831 8971 3.965379 TCATAGTCAAAACGTGGCCTA 57.035 42.857 3.32 0.00 29.16 3.93
8832 8972 4.274602 TCATAGTCAAAACGTGGCCTAA 57.725 40.909 3.32 0.00 29.16 2.69
8833 8973 4.250464 TCATAGTCAAAACGTGGCCTAAG 58.750 43.478 3.32 0.00 29.16 2.18
8834 8974 2.922740 AGTCAAAACGTGGCCTAAGA 57.077 45.000 3.32 0.00 29.16 2.10
8844 8984 2.936498 CGTGGCCTAAGATACAAACCAG 59.064 50.000 3.32 0.00 0.00 4.00
8865 9005 5.044558 CAGAAGCGAGGGAGTAGTATTTTC 58.955 45.833 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.850557 TTTCTTTTGAGTGAAGATTGGCA 57.149 34.783 0.00 0.00 33.48 4.92
32 33 1.068333 ACTGCATGTTCGATTGGCAAC 60.068 47.619 0.00 0.00 33.58 4.17
33 34 1.068402 CACTGCATGTTCGATTGGCAA 60.068 47.619 0.68 0.68 33.58 4.52
34 35 0.522626 CACTGCATGTTCGATTGGCA 59.477 50.000 0.00 0.00 0.00 4.92
35 36 0.523072 ACACTGCATGTTCGATTGGC 59.477 50.000 0.00 0.00 38.98 4.52
44 45 2.586425 ACTAGCCAAAACACTGCATGT 58.414 42.857 0.00 0.00 46.42 3.21
45 46 3.648339 AACTAGCCAAAACACTGCATG 57.352 42.857 0.00 0.00 0.00 4.06
46 47 4.670896 AAAACTAGCCAAAACACTGCAT 57.329 36.364 0.00 0.00 0.00 3.96
47 48 4.499019 GCTAAAACTAGCCAAAACACTGCA 60.499 41.667 0.00 0.00 37.11 4.41
48 49 3.981416 GCTAAAACTAGCCAAAACACTGC 59.019 43.478 0.00 0.00 37.11 4.40
49 50 5.181690 TGCTAAAACTAGCCAAAACACTG 57.818 39.130 1.88 0.00 42.17 3.66
50 51 6.715264 ACTATGCTAAAACTAGCCAAAACACT 59.285 34.615 1.88 0.00 42.17 3.55
51 52 6.909909 ACTATGCTAAAACTAGCCAAAACAC 58.090 36.000 1.88 0.00 42.17 3.32
52 53 8.508875 GTTACTATGCTAAAACTAGCCAAAACA 58.491 33.333 1.88 0.00 42.17 2.83
126 127 7.344441 GTCACAAATTTTGAACATGGTTAAGC 58.656 34.615 15.81 0.00 0.00 3.09
175 176 7.817962 GGACTACACAACACTAGATAAACATGT 59.182 37.037 0.00 0.00 0.00 3.21
316 317 6.750148 AGTGCCTAACTATTATGTAGCTCAC 58.250 40.000 0.00 0.00 37.36 3.51
331 332 5.122396 CACTGAAAGGTATCAAGTGCCTAAC 59.878 44.000 0.00 0.00 42.78 2.34
342 343 7.051000 AGGAGAAAATAGCACTGAAAGGTATC 58.949 38.462 0.00 0.00 39.30 2.24
370 371 6.934083 TCTGCAACTTAATTGTATGACAGTGA 59.066 34.615 0.00 0.00 40.77 3.41
480 481 1.668751 TGCACGTGTTTCTTCCTGTTC 59.331 47.619 18.38 0.00 0.00 3.18
617 629 6.546428 ACCAAGCTATGTATGACTAACTGT 57.454 37.500 0.00 0.00 0.00 3.55
642 654 2.136298 TAGAGAGAGTGAGTGCAGGG 57.864 55.000 0.00 0.00 0.00 4.45
646 658 8.612619 GCTAGAATATATAGAGAGAGTGAGTGC 58.387 40.741 0.00 0.00 0.00 4.40
647 659 9.890629 AGCTAGAATATATAGAGAGAGTGAGTG 57.109 37.037 0.00 0.00 0.00 3.51
756 772 9.755122 AGCTGGTTAGTGTCTCACATATATATA 57.245 33.333 0.00 0.00 36.74 0.86
757 773 8.657387 AGCTGGTTAGTGTCTCACATATATAT 57.343 34.615 2.80 0.00 36.74 0.86
758 774 9.232473 CTAGCTGGTTAGTGTCTCACATATATA 57.768 37.037 0.00 0.00 36.74 0.86
759 775 6.985653 AGCTGGTTAGTGTCTCACATATAT 57.014 37.500 2.80 0.00 36.74 0.86
760 776 6.016192 GCTAGCTGGTTAGTGTCTCACATATA 60.016 42.308 7.70 0.00 36.74 0.86
761 777 5.221342 GCTAGCTGGTTAGTGTCTCACATAT 60.221 44.000 7.70 0.00 36.74 1.78
762 778 4.098044 GCTAGCTGGTTAGTGTCTCACATA 59.902 45.833 7.70 0.00 36.74 2.29
763 779 3.118956 GCTAGCTGGTTAGTGTCTCACAT 60.119 47.826 7.70 0.00 36.74 3.21
764 780 2.231478 GCTAGCTGGTTAGTGTCTCACA 59.769 50.000 7.70 0.00 36.74 3.58
765 781 2.231478 TGCTAGCTGGTTAGTGTCTCAC 59.769 50.000 17.23 0.00 34.10 3.51
766 782 2.493675 CTGCTAGCTGGTTAGTGTCTCA 59.506 50.000 17.23 0.00 0.00 3.27
767 783 2.159170 CCTGCTAGCTGGTTAGTGTCTC 60.159 54.545 27.73 0.00 0.00 3.36
768 784 1.827969 CCTGCTAGCTGGTTAGTGTCT 59.172 52.381 27.73 0.00 0.00 3.41
769 785 1.550976 ACCTGCTAGCTGGTTAGTGTC 59.449 52.381 33.67 0.00 44.20 3.67
770 786 1.645710 ACCTGCTAGCTGGTTAGTGT 58.354 50.000 33.67 15.38 44.20 3.55
771 787 2.761208 ACTACCTGCTAGCTGGTTAGTG 59.239 50.000 40.38 29.70 44.20 2.74
772 788 3.103080 ACTACCTGCTAGCTGGTTAGT 57.897 47.619 40.38 33.76 44.20 2.24
773 789 5.768662 TGTATACTACCTGCTAGCTGGTTAG 59.231 44.000 40.38 33.28 44.20 2.34
774 790 5.698104 TGTATACTACCTGCTAGCTGGTTA 58.302 41.667 40.38 30.18 44.20 2.85
775 791 4.543689 TGTATACTACCTGCTAGCTGGTT 58.456 43.478 40.38 29.25 44.20 3.67
777 793 5.710567 TGTATGTATACTACCTGCTAGCTGG 59.289 44.000 32.42 32.42 36.48 4.85
778 794 6.431543 AGTGTATGTATACTACCTGCTAGCTG 59.568 42.308 17.23 15.65 34.41 4.24
779 795 6.544650 AGTGTATGTATACTACCTGCTAGCT 58.455 40.000 17.23 0.00 34.41 3.32
780 796 6.430308 TGAGTGTATGTATACTACCTGCTAGC 59.570 42.308 8.10 8.10 34.41 3.42
781 797 7.981102 TGAGTGTATGTATACTACCTGCTAG 57.019 40.000 4.17 0.00 34.41 3.42
782 798 8.161425 TCATGAGTGTATGTATACTACCTGCTA 58.839 37.037 4.17 0.00 34.41 3.49
783 799 7.004691 TCATGAGTGTATGTATACTACCTGCT 58.995 38.462 4.17 3.71 34.41 4.24
784 800 7.215719 TCATGAGTGTATGTATACTACCTGC 57.784 40.000 4.17 0.00 34.41 4.85
785 801 7.175816 AGCTCATGAGTGTATGTATACTACCTG 59.824 40.741 23.38 0.00 34.41 4.00
786 802 7.235079 AGCTCATGAGTGTATGTATACTACCT 58.765 38.462 23.38 3.80 34.41 3.08
787 803 7.175119 TGAGCTCATGAGTGTATGTATACTACC 59.825 40.741 23.38 1.50 34.41 3.18
788 804 8.018520 GTGAGCTCATGAGTGTATGTATACTAC 58.981 40.741 21.47 5.22 34.41 2.73
789 805 7.719633 TGTGAGCTCATGAGTGTATGTATACTA 59.280 37.037 21.47 0.00 34.41 1.82
790 806 6.547510 TGTGAGCTCATGAGTGTATGTATACT 59.452 38.462 21.47 8.10 34.41 2.12
791 807 6.739112 TGTGAGCTCATGAGTGTATGTATAC 58.261 40.000 21.47 10.35 0.00 1.47
792 808 6.959639 TGTGAGCTCATGAGTGTATGTATA 57.040 37.500 21.47 0.62 0.00 1.47
793 809 5.859205 TGTGAGCTCATGAGTGTATGTAT 57.141 39.130 21.47 0.79 0.00 2.29
794 810 5.410924 GTTGTGAGCTCATGAGTGTATGTA 58.589 41.667 21.47 2.82 0.00 2.29
795 811 4.248859 GTTGTGAGCTCATGAGTGTATGT 58.751 43.478 21.47 2.47 0.00 2.29
796 812 3.620374 GGTTGTGAGCTCATGAGTGTATG 59.380 47.826 21.47 0.00 0.00 2.39
797 813 3.369892 GGGTTGTGAGCTCATGAGTGTAT 60.370 47.826 21.47 7.95 0.00 2.29
798 814 2.028112 GGGTTGTGAGCTCATGAGTGTA 60.028 50.000 21.47 7.61 0.00 2.90
799 815 1.271054 GGGTTGTGAGCTCATGAGTGT 60.271 52.381 21.47 11.69 0.00 3.55
800 816 1.002888 AGGGTTGTGAGCTCATGAGTG 59.997 52.381 21.47 0.72 0.00 3.51
801 817 1.277557 GAGGGTTGTGAGCTCATGAGT 59.722 52.381 21.47 10.70 0.00 3.41
802 818 1.554160 AGAGGGTTGTGAGCTCATGAG 59.446 52.381 21.47 18.84 0.00 2.90
803 819 1.649321 AGAGGGTTGTGAGCTCATGA 58.351 50.000 21.47 8.85 0.00 3.07
804 820 2.486472 AAGAGGGTTGTGAGCTCATG 57.514 50.000 21.47 0.00 0.00 3.07
805 821 2.787994 CAAAGAGGGTTGTGAGCTCAT 58.212 47.619 21.47 1.50 0.00 2.90
806 822 1.815408 GCAAAGAGGGTTGTGAGCTCA 60.815 52.381 13.74 13.74 0.00 4.26
807 823 0.877743 GCAAAGAGGGTTGTGAGCTC 59.122 55.000 6.82 6.82 0.00 4.09
808 824 0.538287 GGCAAAGAGGGTTGTGAGCT 60.538 55.000 0.00 0.00 0.00 4.09
917 933 2.544685 AGCAACTTAGCGTGCAGATAG 58.455 47.619 10.46 0.00 40.15 2.08
921 937 0.867746 TGAAGCAACTTAGCGTGCAG 59.132 50.000 10.46 0.00 40.15 4.41
1103 1120 2.531685 ACAGCACCCAGGGCCTAA 60.532 61.111 5.28 0.00 0.00 2.69
1255 1273 7.189693 TCGTTAAACTTCTTGTACGACTAGA 57.810 36.000 0.00 0.00 33.65 2.43
1296 1314 0.443869 CATGTGCAAGTACCTGACGC 59.556 55.000 0.00 0.00 0.00 5.19
1333 1351 4.358851 GCGCATCAACTAAAATTGCCATA 58.641 39.130 0.30 0.00 0.00 2.74
1336 1354 1.583404 CGCGCATCAACTAAAATTGCC 59.417 47.619 8.75 0.00 0.00 4.52
1344 1362 0.529773 GGACATCCGCGCATCAACTA 60.530 55.000 8.75 0.00 0.00 2.24
1355 1373 5.095490 GCTTGTAAGAAAAATGGACATCCG 58.905 41.667 0.00 0.00 39.43 4.18
1361 1379 4.340666 TGCTGTGCTTGTAAGAAAAATGGA 59.659 37.500 0.00 0.00 0.00 3.41
1370 1388 4.874970 AGGAAAATTGCTGTGCTTGTAAG 58.125 39.130 0.00 0.00 0.00 2.34
1381 1400 9.208022 GTTTATCTTTTTGCTAGGAAAATTGCT 57.792 29.630 20.96 11.90 0.00 3.91
1382 1401 9.208022 AGTTTATCTTTTTGCTAGGAAAATTGC 57.792 29.630 20.96 8.93 0.00 3.56
1408 1427 3.119388 GCAAGCATGGCAAATCTGTCTTA 60.119 43.478 0.00 0.00 32.79 2.10
1421 1440 1.549203 AGTTTAGTGGGCAAGCATGG 58.451 50.000 0.00 0.00 0.00 3.66
1474 1493 1.537990 GCACATGGCAAAAGGAACGTT 60.538 47.619 0.00 0.00 43.97 3.99
1475 1494 0.031994 GCACATGGCAAAAGGAACGT 59.968 50.000 0.00 0.00 43.97 3.99
1476 1495 2.813100 GCACATGGCAAAAGGAACG 58.187 52.632 0.00 0.00 43.97 3.95
1502 1521 7.125659 TGGAATCTGATAAAGTACCTGATGTCA 59.874 37.037 0.00 0.00 0.00 3.58
1506 1525 8.095452 ACTTGGAATCTGATAAAGTACCTGAT 57.905 34.615 10.04 0.00 29.56 2.90
1520 1539 8.970691 AACAAATCGATTAAACTTGGAATCTG 57.029 30.769 11.83 3.68 31.15 2.90
1521 1540 9.014297 AGAACAAATCGATTAAACTTGGAATCT 57.986 29.630 11.83 8.23 31.15 2.40
1612 1631 8.730680 GTCACATAAATGGACTGTTAAGATGTT 58.269 33.333 0.00 0.00 0.00 2.71
1615 1634 7.103641 ACGTCACATAAATGGACTGTTAAGAT 58.896 34.615 8.79 0.00 0.00 2.40
1661 1680 4.411540 AGGCACATCTCTATGAGTTGGATT 59.588 41.667 9.52 0.00 34.70 3.01
1680 1699 3.430453 CTCCCCTTCATTTTGTTAGGCA 58.570 45.455 0.00 0.00 0.00 4.75
1760 1785 4.323477 GCCCACCACACTGCGGTA 62.323 66.667 0.00 0.00 34.02 4.02
1830 1855 3.674955 CGATGTAGATCAACGGTGGTGAA 60.675 47.826 0.00 0.00 38.39 3.18
1898 1923 8.398878 TGTTGAAAAGGGTAGGTAATAGTTTG 57.601 34.615 0.00 0.00 0.00 2.93
1919 1944 0.250553 TTGCCGGTAGACCCTTGTTG 60.251 55.000 1.90 0.00 0.00 3.33
2009 2037 1.450312 CACCTCTGGCCCGATCAAC 60.450 63.158 0.00 0.00 0.00 3.18
2258 2286 4.242475 CGGTTCTGCACTAGTGATAACAA 58.758 43.478 27.08 7.91 0.00 2.83
2265 2293 1.741770 GCCCGGTTCTGCACTAGTG 60.742 63.158 18.93 18.93 0.00 2.74
2266 2294 1.764571 TTGCCCGGTTCTGCACTAGT 61.765 55.000 0.00 0.00 37.18 2.57
2267 2295 0.392998 ATTGCCCGGTTCTGCACTAG 60.393 55.000 0.00 0.00 37.18 2.57
2269 2297 0.392998 CTATTGCCCGGTTCTGCACT 60.393 55.000 0.00 0.00 37.18 4.40
2270 2298 1.993369 GCTATTGCCCGGTTCTGCAC 61.993 60.000 0.00 0.00 37.18 4.57
2271 2299 1.748879 GCTATTGCCCGGTTCTGCA 60.749 57.895 0.00 0.00 35.27 4.41
2272 2300 1.748879 TGCTATTGCCCGGTTCTGC 60.749 57.895 0.00 0.00 38.71 4.26
2275 2303 2.469516 CGGTGCTATTGCCCGGTTC 61.470 63.158 16.86 0.00 43.94 3.62
2276 2304 2.265467 ATCGGTGCTATTGCCCGGTT 62.265 55.000 21.56 11.69 45.99 4.44
2277 2305 2.265467 AATCGGTGCTATTGCCCGGT 62.265 55.000 21.56 15.64 45.99 5.28
2278 2306 1.507141 GAATCGGTGCTATTGCCCGG 61.507 60.000 21.56 0.00 45.99 5.73
2279 2307 1.831389 CGAATCGGTGCTATTGCCCG 61.831 60.000 17.97 17.97 46.73 6.13
2280 2308 0.814010 ACGAATCGGTGCTATTGCCC 60.814 55.000 7.80 0.00 38.71 5.36
2281 2309 1.860676 TACGAATCGGTGCTATTGCC 58.139 50.000 7.80 0.00 38.71 4.52
2282 2310 2.221055 CCTTACGAATCGGTGCTATTGC 59.779 50.000 7.80 0.00 40.20 3.56
2283 2311 3.454375 ACCTTACGAATCGGTGCTATTG 58.546 45.455 7.80 0.00 0.00 1.90
2284 2312 3.492137 GGACCTTACGAATCGGTGCTATT 60.492 47.826 7.80 0.00 36.38 1.73
2285 2313 2.035576 GGACCTTACGAATCGGTGCTAT 59.964 50.000 7.80 0.00 36.38 2.97
2286 2314 1.406539 GGACCTTACGAATCGGTGCTA 59.593 52.381 7.80 0.00 36.38 3.49
2287 2315 0.175073 GGACCTTACGAATCGGTGCT 59.825 55.000 7.80 0.00 36.38 4.40
2288 2316 0.175073 AGGACCTTACGAATCGGTGC 59.825 55.000 7.80 0.10 39.17 5.01
2289 2317 2.667473 AAGGACCTTACGAATCGGTG 57.333 50.000 4.44 0.00 0.00 4.94
2290 2318 3.766051 ACTAAAGGACCTTACGAATCGGT 59.234 43.478 7.30 0.00 0.00 4.69
2291 2319 4.110482 CACTAAAGGACCTTACGAATCGG 58.890 47.826 7.30 0.00 0.00 4.18
2292 2320 3.550678 GCACTAAAGGACCTTACGAATCG 59.449 47.826 7.30 0.00 0.00 3.34
2293 2321 3.869832 GGCACTAAAGGACCTTACGAATC 59.130 47.826 7.30 0.00 0.00 2.52
2294 2322 3.677976 CGGCACTAAAGGACCTTACGAAT 60.678 47.826 7.30 0.00 0.00 3.34
2295 2323 2.353011 CGGCACTAAAGGACCTTACGAA 60.353 50.000 7.30 0.00 0.00 3.85
2296 2324 1.203052 CGGCACTAAAGGACCTTACGA 59.797 52.381 7.30 0.00 0.00 3.43
2297 2325 1.636988 CGGCACTAAAGGACCTTACG 58.363 55.000 7.30 4.18 0.00 3.18
2298 2326 1.277273 ACCGGCACTAAAGGACCTTAC 59.723 52.381 7.30 0.00 0.00 2.34
2299 2327 1.648116 ACCGGCACTAAAGGACCTTA 58.352 50.000 7.30 0.00 0.00 2.69
2300 2328 0.769247 AACCGGCACTAAAGGACCTT 59.231 50.000 0.00 0.00 0.00 3.50
2301 2329 0.323957 GAACCGGCACTAAAGGACCT 59.676 55.000 0.00 0.00 0.00 3.85
2302 2330 0.035739 TGAACCGGCACTAAAGGACC 59.964 55.000 0.00 0.00 0.00 4.46
2303 2331 1.439679 CTGAACCGGCACTAAAGGAC 58.560 55.000 0.00 0.00 0.00 3.85
2304 2332 0.323629 CCTGAACCGGCACTAAAGGA 59.676 55.000 0.00 0.00 0.00 3.36
2305 2333 0.323629 TCCTGAACCGGCACTAAAGG 59.676 55.000 0.00 0.00 0.00 3.11
2306 2334 1.804748 GTTCCTGAACCGGCACTAAAG 59.195 52.381 0.00 0.00 35.36 1.85
2307 2335 1.886886 GTTCCTGAACCGGCACTAAA 58.113 50.000 0.00 0.00 35.36 1.85
2308 2336 3.618171 GTTCCTGAACCGGCACTAA 57.382 52.632 0.00 0.00 35.36 2.24
2317 2345 5.453567 AACTTTAATGCTGGTTCCTGAAC 57.546 39.130 1.33 1.33 40.45 3.18
2318 2346 5.278266 CGAAACTTTAATGCTGGTTCCTGAA 60.278 40.000 0.00 0.00 0.00 3.02
2319 2347 4.215399 CGAAACTTTAATGCTGGTTCCTGA 59.785 41.667 0.00 0.00 0.00 3.86
2320 2348 4.475944 CGAAACTTTAATGCTGGTTCCTG 58.524 43.478 0.00 0.00 0.00 3.86
2321 2349 3.506067 CCGAAACTTTAATGCTGGTTCCT 59.494 43.478 0.00 0.00 0.00 3.36
2322 2350 3.833442 CCGAAACTTTAATGCTGGTTCC 58.167 45.455 0.00 0.00 0.00 3.62
2323 2351 3.242518 GCCGAAACTTTAATGCTGGTTC 58.757 45.455 0.00 0.00 0.00 3.62
2324 2352 2.625790 TGCCGAAACTTTAATGCTGGTT 59.374 40.909 0.00 0.00 0.00 3.67
2325 2353 2.030274 GTGCCGAAACTTTAATGCTGGT 60.030 45.455 0.00 0.00 0.00 4.00
2326 2354 2.228822 AGTGCCGAAACTTTAATGCTGG 59.771 45.455 0.00 0.00 0.00 4.85
2327 2355 3.559238 AGTGCCGAAACTTTAATGCTG 57.441 42.857 0.00 0.00 0.00 4.41
2328 2356 5.335661 CCTTTAGTGCCGAAACTTTAATGCT 60.336 40.000 0.00 0.00 0.00 3.79
2329 2357 4.857037 CCTTTAGTGCCGAAACTTTAATGC 59.143 41.667 0.00 0.00 0.00 3.56
2330 2358 4.857037 GCCTTTAGTGCCGAAACTTTAATG 59.143 41.667 0.00 0.00 0.00 1.90
2331 2359 4.082408 GGCCTTTAGTGCCGAAACTTTAAT 60.082 41.667 0.00 0.00 39.48 1.40
2332 2360 3.253921 GGCCTTTAGTGCCGAAACTTTAA 59.746 43.478 0.00 0.00 39.48 1.52
2333 2361 2.815503 GGCCTTTAGTGCCGAAACTTTA 59.184 45.455 0.00 0.00 39.48 1.85
2334 2362 1.611977 GGCCTTTAGTGCCGAAACTTT 59.388 47.619 0.00 0.00 39.48 2.66
2335 2363 1.244816 GGCCTTTAGTGCCGAAACTT 58.755 50.000 0.00 0.00 39.48 2.66
2336 2364 2.942641 GGCCTTTAGTGCCGAAACT 58.057 52.632 0.00 0.00 39.48 2.66
2359 2387 1.208776 CTGAACCGGTACTAAAGGGGG 59.791 57.143 8.00 0.00 0.00 5.40
2360 2388 1.406477 GCTGAACCGGTACTAAAGGGG 60.406 57.143 8.00 0.00 0.00 4.79
2361 2389 1.276989 TGCTGAACCGGTACTAAAGGG 59.723 52.381 8.00 0.00 0.00 3.95
2362 2390 2.754946 TGCTGAACCGGTACTAAAGG 57.245 50.000 8.00 0.00 0.00 3.11
2363 2391 3.857052 TCATGCTGAACCGGTACTAAAG 58.143 45.455 8.00 2.29 0.00 1.85
2364 2392 3.965379 TCATGCTGAACCGGTACTAAA 57.035 42.857 8.00 0.00 0.00 1.85
2365 2393 3.965379 TTCATGCTGAACCGGTACTAA 57.035 42.857 8.00 0.00 30.26 2.24
2375 2403 3.667087 GCACCGGTTCATGCTGAA 58.333 55.556 2.97 0.00 38.84 3.02
2379 2407 1.135402 CCTTTTAGCACCGGTTCATGC 60.135 52.381 2.97 5.25 42.39 4.06
2380 2408 2.432444 TCCTTTTAGCACCGGTTCATG 58.568 47.619 2.97 0.00 0.00 3.07
2381 2409 2.871096 TCCTTTTAGCACCGGTTCAT 57.129 45.000 2.97 0.00 0.00 2.57
2382 2410 2.619646 GTTTCCTTTTAGCACCGGTTCA 59.380 45.455 2.97 0.00 0.00 3.18
2383 2411 2.030540 GGTTTCCTTTTAGCACCGGTTC 60.031 50.000 2.97 0.00 0.00 3.62
2384 2412 1.958579 GGTTTCCTTTTAGCACCGGTT 59.041 47.619 2.97 0.00 0.00 4.44
2385 2413 1.133730 TGGTTTCCTTTTAGCACCGGT 60.134 47.619 0.00 0.00 0.00 5.28
2386 2414 1.268625 GTGGTTTCCTTTTAGCACCGG 59.731 52.381 0.00 0.00 36.92 5.28
2387 2415 1.069500 CGTGGTTTCCTTTTAGCACCG 60.069 52.381 0.00 0.00 39.05 4.94
2388 2416 1.951602 ACGTGGTTTCCTTTTAGCACC 59.048 47.619 0.00 0.00 39.05 5.01
2389 2417 2.287368 CCACGTGGTTTCCTTTTAGCAC 60.287 50.000 26.95 0.00 38.91 4.40
2390 2418 1.950909 CCACGTGGTTTCCTTTTAGCA 59.049 47.619 26.95 0.00 0.00 3.49
2391 2419 1.335597 GCCACGTGGTTTCCTTTTAGC 60.336 52.381 33.92 12.50 37.57 3.09
2392 2420 1.950909 TGCCACGTGGTTTCCTTTTAG 59.049 47.619 33.92 6.07 37.57 1.85
2393 2421 1.677052 GTGCCACGTGGTTTCCTTTTA 59.323 47.619 33.92 8.23 37.57 1.52
2394 2422 0.458260 GTGCCACGTGGTTTCCTTTT 59.542 50.000 33.92 0.00 37.57 2.27
2395 2423 1.720694 CGTGCCACGTGGTTTCCTTT 61.721 55.000 33.92 0.00 36.74 3.11
2396 2424 2.184167 CGTGCCACGTGGTTTCCTT 61.184 57.895 33.92 0.00 36.74 3.36
2397 2425 2.590575 CGTGCCACGTGGTTTCCT 60.591 61.111 33.92 0.00 36.74 3.36
2398 2426 2.589442 TCGTGCCACGTGGTTTCC 60.589 61.111 33.92 18.72 43.14 3.13
2399 2427 1.828331 GACTCGTGCCACGTGGTTTC 61.828 60.000 33.92 22.22 43.14 2.78
2400 2428 1.885850 GACTCGTGCCACGTGGTTT 60.886 57.895 33.92 13.19 43.14 3.27
2401 2429 2.279918 GACTCGTGCCACGTGGTT 60.280 61.111 33.92 12.83 43.14 3.67
2402 2430 3.499929 CTGACTCGTGCCACGTGGT 62.500 63.158 33.92 14.84 43.14 4.16
2403 2431 2.734723 CTGACTCGTGCCACGTGG 60.735 66.667 30.66 30.66 43.14 4.94
2404 2432 3.406361 GCTGACTCGTGCCACGTG 61.406 66.667 17.83 17.30 43.14 4.49
2405 2433 3.559657 GAGCTGACTCGTGCCACGT 62.560 63.158 17.83 0.00 43.14 4.49
2406 2434 2.807045 GAGCTGACTCGTGCCACG 60.807 66.667 11.80 11.80 44.19 4.94
2407 2435 2.433318 GGAGCTGACTCGTGCCAC 60.433 66.667 0.00 0.00 44.48 5.01
2408 2436 4.056125 CGGAGCTGACTCGTGCCA 62.056 66.667 0.00 0.00 44.48 4.92
2409 2437 4.803426 CCGGAGCTGACTCGTGCC 62.803 72.222 0.00 0.00 44.48 5.01
2410 2438 4.803426 CCCGGAGCTGACTCGTGC 62.803 72.222 0.73 0.00 44.48 5.34
2411 2439 4.135153 CCCCGGAGCTGACTCGTG 62.135 72.222 0.73 0.00 44.48 4.35
2429 2457 1.145598 GTACTAAAGGGCTCCCGGC 59.854 63.158 0.00 0.00 41.95 6.13
2430 2458 1.828081 GGTACTAAAGGGCTCCCGG 59.172 63.158 0.00 0.00 41.95 5.73
2431 2459 1.440476 CGGTACTAAAGGGCTCCCG 59.560 63.158 0.00 0.00 41.95 5.14
2432 2460 0.979709 ACCGGTACTAAAGGGCTCCC 60.980 60.000 4.49 0.00 0.00 4.30
2433 2461 0.907486 AACCGGTACTAAAGGGCTCC 59.093 55.000 8.00 0.00 0.00 4.70
2434 2462 1.406477 CCAACCGGTACTAAAGGGCTC 60.406 57.143 8.00 0.00 0.00 4.70
2435 2463 0.616891 CCAACCGGTACTAAAGGGCT 59.383 55.000 8.00 0.00 0.00 5.19
2436 2464 0.325933 ACCAACCGGTACTAAAGGGC 59.674 55.000 8.00 0.00 46.71 5.19
2445 2473 3.523547 CGATTGATGTTACCAACCGGTA 58.476 45.455 8.00 0.00 46.71 4.02
2446 2474 2.937873 CCGATTGATGTTACCAACCGGT 60.938 50.000 0.00 0.00 43.77 5.28
2447 2475 1.668751 CCGATTGATGTTACCAACCGG 59.331 52.381 0.00 0.00 43.36 5.28
2448 2476 2.352388 ACCGATTGATGTTACCAACCG 58.648 47.619 0.00 0.00 30.71 4.44
2449 2477 4.510571 AGTACCGATTGATGTTACCAACC 58.489 43.478 0.00 0.00 0.00 3.77
2450 2478 7.599630 TTTAGTACCGATTGATGTTACCAAC 57.400 36.000 0.00 0.00 0.00 3.77
2451 2479 8.670135 CATTTTAGTACCGATTGATGTTACCAA 58.330 33.333 0.00 0.00 0.00 3.67
2452 2480 7.825270 ACATTTTAGTACCGATTGATGTTACCA 59.175 33.333 0.00 0.00 0.00 3.25
2453 2481 8.205131 ACATTTTAGTACCGATTGATGTTACC 57.795 34.615 0.00 0.00 0.00 2.85
2456 2484 8.026607 CCAAACATTTTAGTACCGATTGATGTT 58.973 33.333 0.00 0.00 37.89 2.71
2457 2485 7.362574 CCCAAACATTTTAGTACCGATTGATGT 60.363 37.037 0.00 0.00 0.00 3.06
2458 2486 6.972328 CCCAAACATTTTAGTACCGATTGATG 59.028 38.462 0.00 0.00 0.00 3.07
2459 2487 6.096282 CCCCAAACATTTTAGTACCGATTGAT 59.904 38.462 0.00 0.00 0.00 2.57
2460 2488 5.416326 CCCCAAACATTTTAGTACCGATTGA 59.584 40.000 0.00 0.00 0.00 2.57
2461 2489 5.393678 CCCCCAAACATTTTAGTACCGATTG 60.394 44.000 0.00 0.00 0.00 2.67
2462 2490 4.707934 CCCCCAAACATTTTAGTACCGATT 59.292 41.667 0.00 0.00 0.00 3.34
2463 2491 4.264038 ACCCCCAAACATTTTAGTACCGAT 60.264 41.667 0.00 0.00 0.00 4.18
2464 2492 3.074242 ACCCCCAAACATTTTAGTACCGA 59.926 43.478 0.00 0.00 0.00 4.69
2465 2493 3.423749 ACCCCCAAACATTTTAGTACCG 58.576 45.455 0.00 0.00 0.00 4.02
2466 2494 5.811796 AAACCCCCAAACATTTTAGTACC 57.188 39.130 0.00 0.00 0.00 3.34
2467 2495 6.483974 CCAAAAACCCCCAAACATTTTAGTAC 59.516 38.462 0.00 0.00 0.00 2.73
2468 2496 6.158169 ACCAAAAACCCCCAAACATTTTAGTA 59.842 34.615 0.00 0.00 0.00 1.82
2469 2497 5.044772 ACCAAAAACCCCCAAACATTTTAGT 60.045 36.000 0.00 0.00 0.00 2.24
2470 2498 5.441500 ACCAAAAACCCCCAAACATTTTAG 58.558 37.500 0.00 0.00 0.00 1.85
2471 2499 5.452341 ACCAAAAACCCCCAAACATTTTA 57.548 34.783 0.00 0.00 0.00 1.52
2472 2500 4.323569 ACCAAAAACCCCCAAACATTTT 57.676 36.364 0.00 0.00 0.00 1.82
2473 2501 4.323569 AACCAAAAACCCCCAAACATTT 57.676 36.364 0.00 0.00 0.00 2.32
2474 2502 4.323569 AAACCAAAAACCCCCAAACATT 57.676 36.364 0.00 0.00 0.00 2.71
2475 2503 4.323569 AAAACCAAAAACCCCCAAACAT 57.676 36.364 0.00 0.00 0.00 2.71
2476 2504 3.808834 AAAACCAAAAACCCCCAAACA 57.191 38.095 0.00 0.00 0.00 2.83
2477 2505 5.437946 TCATAAAACCAAAAACCCCCAAAC 58.562 37.500 0.00 0.00 0.00 2.93
2478 2506 5.710409 TCATAAAACCAAAAACCCCCAAA 57.290 34.783 0.00 0.00 0.00 3.28
2479 2507 5.913946 ATCATAAAACCAAAAACCCCCAA 57.086 34.783 0.00 0.00 0.00 4.12
2480 2508 5.913946 AATCATAAAACCAAAAACCCCCA 57.086 34.783 0.00 0.00 0.00 4.96
2481 2509 7.589958 AAAAATCATAAAACCAAAAACCCCC 57.410 32.000 0.00 0.00 0.00 5.40
2528 2556 9.535878 ACCAGCAAACGAAAAAGAATTAAAATA 57.464 25.926 0.00 0.00 0.00 1.40
2529 2557 8.432110 ACCAGCAAACGAAAAAGAATTAAAAT 57.568 26.923 0.00 0.00 0.00 1.82
2530 2558 7.835634 ACCAGCAAACGAAAAAGAATTAAAA 57.164 28.000 0.00 0.00 0.00 1.52
2531 2559 9.535878 AATACCAGCAAACGAAAAAGAATTAAA 57.464 25.926 0.00 0.00 0.00 1.52
2532 2560 9.535878 AAATACCAGCAAACGAAAAAGAATTAA 57.464 25.926 0.00 0.00 0.00 1.40
2533 2561 9.535878 AAAATACCAGCAAACGAAAAAGAATTA 57.464 25.926 0.00 0.00 0.00 1.40
2534 2562 8.432110 AAAATACCAGCAAACGAAAAAGAATT 57.568 26.923 0.00 0.00 0.00 2.17
2535 2563 8.974408 GTAAAATACCAGCAAACGAAAAAGAAT 58.026 29.630 0.00 0.00 0.00 2.40
2536 2564 7.166142 CGTAAAATACCAGCAAACGAAAAAGAA 59.834 33.333 0.00 0.00 0.00 2.52
2537 2565 6.633634 CGTAAAATACCAGCAAACGAAAAAGA 59.366 34.615 0.00 0.00 0.00 2.52
2538 2566 6.129300 CCGTAAAATACCAGCAAACGAAAAAG 60.129 38.462 0.00 0.00 0.00 2.27
2539 2567 5.686397 CCGTAAAATACCAGCAAACGAAAAA 59.314 36.000 0.00 0.00 0.00 1.94
2540 2568 5.213675 CCGTAAAATACCAGCAAACGAAAA 58.786 37.500 0.00 0.00 0.00 2.29
2541 2569 4.275443 ACCGTAAAATACCAGCAAACGAAA 59.725 37.500 0.00 0.00 0.00 3.46
2542 2570 3.814283 ACCGTAAAATACCAGCAAACGAA 59.186 39.130 0.00 0.00 0.00 3.85
2543 2571 3.401182 ACCGTAAAATACCAGCAAACGA 58.599 40.909 0.00 0.00 0.00 3.85
2544 2572 3.817148 ACCGTAAAATACCAGCAAACG 57.183 42.857 0.00 0.00 0.00 3.60
2545 2573 5.868043 AGTACCGTAAAATACCAGCAAAC 57.132 39.130 0.00 0.00 0.00 2.93
2546 2574 6.368516 GTGTAGTACCGTAAAATACCAGCAAA 59.631 38.462 0.00 0.00 0.00 3.68
2547 2575 5.868801 GTGTAGTACCGTAAAATACCAGCAA 59.131 40.000 0.00 0.00 0.00 3.91
2548 2576 5.047448 TGTGTAGTACCGTAAAATACCAGCA 60.047 40.000 0.00 0.00 0.00 4.41
2549 2577 5.410067 TGTGTAGTACCGTAAAATACCAGC 58.590 41.667 0.00 0.00 0.00 4.85
2550 2578 8.483307 AAATGTGTAGTACCGTAAAATACCAG 57.517 34.615 0.00 0.00 0.00 4.00
2551 2579 8.845413 AAAATGTGTAGTACCGTAAAATACCA 57.155 30.769 0.00 0.00 0.00 3.25
2553 2581 9.885743 CGTAAAATGTGTAGTACCGTAAAATAC 57.114 33.333 0.00 0.00 0.00 1.89
2554 2582 9.081997 CCGTAAAATGTGTAGTACCGTAAAATA 57.918 33.333 0.00 0.00 0.00 1.40
2555 2583 7.602265 ACCGTAAAATGTGTAGTACCGTAAAAT 59.398 33.333 0.00 0.00 0.00 1.82
2556 2584 6.926272 ACCGTAAAATGTGTAGTACCGTAAAA 59.074 34.615 0.00 0.00 0.00 1.52
2557 2585 6.451393 ACCGTAAAATGTGTAGTACCGTAAA 58.549 36.000 0.00 0.00 0.00 2.01
2558 2586 6.019779 ACCGTAAAATGTGTAGTACCGTAA 57.980 37.500 0.00 0.00 0.00 3.18
2559 2587 5.637006 ACCGTAAAATGTGTAGTACCGTA 57.363 39.130 0.00 0.00 0.00 4.02
2560 2588 4.519540 ACCGTAAAATGTGTAGTACCGT 57.480 40.909 0.00 0.00 0.00 4.83
2561 2589 5.286082 GTGTACCGTAAAATGTGTAGTACCG 59.714 44.000 0.00 0.00 0.00 4.02
2562 2590 6.089417 GTGTGTACCGTAAAATGTGTAGTACC 59.911 42.308 0.00 0.00 0.00 3.34
2563 2591 6.640499 TGTGTGTACCGTAAAATGTGTAGTAC 59.360 38.462 0.00 0.00 0.00 2.73
2564 2592 6.640499 GTGTGTGTACCGTAAAATGTGTAGTA 59.360 38.462 0.00 0.00 0.00 1.82
2565 2593 5.463061 GTGTGTGTACCGTAAAATGTGTAGT 59.537 40.000 0.00 0.00 0.00 2.73
2566 2594 5.462729 TGTGTGTGTACCGTAAAATGTGTAG 59.537 40.000 0.00 0.00 0.00 2.74
2567 2595 5.233902 GTGTGTGTGTACCGTAAAATGTGTA 59.766 40.000 0.00 0.00 0.00 2.90
2568 2596 4.034279 GTGTGTGTGTACCGTAAAATGTGT 59.966 41.667 0.00 0.00 0.00 3.72
2569 2597 4.520078 GTGTGTGTGTACCGTAAAATGTG 58.480 43.478 0.00 0.00 0.00 3.21
2570 2598 3.245754 CGTGTGTGTGTACCGTAAAATGT 59.754 43.478 0.00 0.00 0.00 2.71
2571 2599 3.363182 CCGTGTGTGTGTACCGTAAAATG 60.363 47.826 0.00 0.00 0.00 2.32
2572 2600 2.801679 CCGTGTGTGTGTACCGTAAAAT 59.198 45.455 0.00 0.00 0.00 1.82
2573 2601 2.200067 CCGTGTGTGTGTACCGTAAAA 58.800 47.619 0.00 0.00 0.00 1.52
2574 2602 1.135915 ACCGTGTGTGTGTACCGTAAA 59.864 47.619 0.00 0.00 0.00 2.01
2575 2603 0.743688 ACCGTGTGTGTGTACCGTAA 59.256 50.000 0.00 0.00 0.00 3.18
2576 2604 1.535028 CTACCGTGTGTGTGTACCGTA 59.465 52.381 0.00 0.00 0.00 4.02
2577 2605 0.311790 CTACCGTGTGTGTGTACCGT 59.688 55.000 0.00 0.00 0.00 4.83
2578 2606 1.005294 GCTACCGTGTGTGTGTACCG 61.005 60.000 0.00 0.00 0.00 4.02
2579 2607 1.005294 CGCTACCGTGTGTGTGTACC 61.005 60.000 0.00 0.00 0.00 3.34
2580 2608 1.611592 GCGCTACCGTGTGTGTGTAC 61.612 60.000 0.00 0.00 36.67 2.90
2581 2609 1.372004 GCGCTACCGTGTGTGTGTA 60.372 57.895 0.00 0.00 36.67 2.90
2582 2610 1.798234 TAGCGCTACCGTGTGTGTGT 61.798 55.000 14.45 0.00 36.67 3.72
2583 2611 0.665068 TTAGCGCTACCGTGTGTGTG 60.665 55.000 18.63 0.00 36.67 3.82
2584 2612 0.032403 TTTAGCGCTACCGTGTGTGT 59.968 50.000 18.63 0.00 36.67 3.72
2585 2613 0.713883 CTTTAGCGCTACCGTGTGTG 59.286 55.000 18.63 0.00 36.67 3.82
2586 2614 0.316204 ACTTTAGCGCTACCGTGTGT 59.684 50.000 18.63 6.95 36.67 3.72
2587 2615 1.916000 GTACTTTAGCGCTACCGTGTG 59.084 52.381 18.63 6.32 36.67 3.82
2588 2616 1.541147 TGTACTTTAGCGCTACCGTGT 59.459 47.619 18.63 15.00 36.67 4.49
2589 2617 1.916000 GTGTACTTTAGCGCTACCGTG 59.084 52.381 18.63 9.87 36.67 4.94
3134 3202 1.409381 GCTAGGCCAGAAGGAAGCATT 60.409 52.381 5.01 0.00 36.95 3.56
3173 3241 7.324388 TGAGAGGTTTATGGGAGTCTTAAAA 57.676 36.000 0.00 0.00 30.20 1.52
3188 3256 3.903530 ATGTTCCCCTTTGAGAGGTTT 57.096 42.857 0.00 0.00 44.71 3.27
3225 3293 4.449743 CGAAGAGATTAACGTTTTGGGTCA 59.550 41.667 5.91 0.00 0.00 4.02
3442 3510 0.881118 GCTTTCGGTTGCATTGAGGA 59.119 50.000 0.00 0.00 0.00 3.71
3457 3525 3.424829 CGTGATTATGACGCAACTGCTTT 60.425 43.478 0.00 0.00 39.32 3.51
3658 3726 0.249398 GGAGGACCAGCAACGTATGT 59.751 55.000 0.00 0.00 35.97 2.29
3685 3753 6.636454 ATGGGAAGACAAAAGATACACCTA 57.364 37.500 0.00 0.00 0.00 3.08
3805 3873 9.408648 GGAAGAAGAAATCTATATTTTGGGACA 57.591 33.333 0.00 0.00 37.42 4.02
4068 4143 1.355971 CACTGTTTGGACGATACCGG 58.644 55.000 0.00 0.00 40.78 5.28
4636 4712 3.054361 GGAAGAAGATTCCTGCCAAGGTA 60.054 47.826 0.00 0.00 44.82 3.08
4666 4742 3.458163 GGTGATGTCGAGGGCCGA 61.458 66.667 0.00 0.00 46.35 5.54
5076 5152 3.326006 TGATGATCTAGGTCAGGCCATTC 59.674 47.826 12.11 3.58 40.61 2.67
5645 5724 3.880047 ATGCTGTTGGATCCATTGTTG 57.120 42.857 17.06 5.87 0.00 3.33
5754 5833 1.233950 TGCATGTTGCCGATGTCGTT 61.234 50.000 1.44 0.00 44.23 3.85
5903 5982 9.056005 GCCATCAAGTTGACATAGATATTTGTA 57.944 33.333 7.96 0.00 0.00 2.41
5905 5984 7.013559 TGGCCATCAAGTTGACATAGATATTTG 59.986 37.037 7.96 0.00 0.00 2.32
5910 5989 4.508551 TGGCCATCAAGTTGACATAGAT 57.491 40.909 7.96 0.00 0.00 1.98
5929 6008 8.320295 GCATTTCGTGTTTATGACAAATTATGG 58.680 33.333 0.00 0.00 40.65 2.74
6600 6688 2.935481 CAGACTGGGCCCCTCCAA 60.935 66.667 22.27 0.00 36.21 3.53
6755 6844 6.184580 CACATTAGTGCCGGTTTGTATTTA 57.815 37.500 1.90 0.00 39.21 1.40
6818 6907 0.179070 GAGCTAGAGGCCCTTTTCGG 60.179 60.000 0.00 0.00 43.05 4.30
6819 6908 0.528684 CGAGCTAGAGGCCCTTTTCG 60.529 60.000 0.00 0.00 43.05 3.46
6850 6939 7.951530 AAACTTTGTAATGAAAAGATGCCTG 57.048 32.000 3.09 0.00 37.91 4.85
6983 7080 5.994250 AGCTTTAGATCAACTATGCCTTCA 58.006 37.500 0.00 0.00 34.16 3.02
7097 7194 5.707298 ACCATTGTCTTCAATCTCGTGAAAT 59.293 36.000 0.00 0.00 41.66 2.17
7127 7224 3.831323 TGGGAACAAGAAGCTGATCAAA 58.169 40.909 0.00 0.00 37.44 2.69
7158 7255 2.032528 CTGCCGGTTTGCTGGAGA 59.967 61.111 1.90 0.00 43.97 3.71
7224 7321 2.304761 TGCCAGAGTTCTTACGGGAATT 59.695 45.455 0.00 0.00 0.00 2.17
7532 7629 1.351350 GTTGGAGGGTGCTTCCTTAGT 59.649 52.381 0.18 0.00 37.25 2.24
7571 7668 3.054875 TCACCATGAAGCTCTTATGTGCT 60.055 43.478 0.00 0.00 43.83 4.40
7733 7830 3.136626 AGAACTTGCCACCTACTTTGTCT 59.863 43.478 0.00 0.00 0.00 3.41
7977 8078 9.140286 GTACATATACACATATAGGTTGCAGTG 57.860 37.037 0.00 0.00 38.76 3.66
8076 8177 6.380846 ACATAATTGTGGGTACGGAACTACTA 59.619 38.462 0.00 0.00 33.85 1.82
8264 8365 6.036517 GCCATTTCAGTAGTGAATAGTGAGTG 59.963 42.308 13.69 2.43 43.23 3.51
8291 8392 0.806102 CAGGACGCACTACCAATCCG 60.806 60.000 0.00 0.00 34.46 4.18
8329 8430 5.957842 TTTTTGCACTCGGTTTATGAGAT 57.042 34.783 0.00 0.00 36.93 2.75
8372 8473 1.896660 GGCTTTGCCGAGTGTCCAA 60.897 57.895 0.00 0.00 39.62 3.53
8433 8534 1.078143 GCCTTTGCCGAGAGTCCAT 60.078 57.895 0.00 0.00 0.00 3.41
8444 8545 1.933853 CATACGTGTCTAGGCCTTTGC 59.066 52.381 12.58 1.24 0.00 3.68
8445 8546 2.093658 ACCATACGTGTCTAGGCCTTTG 60.094 50.000 12.58 4.55 0.00 2.77
8446 8547 2.093658 CACCATACGTGTCTAGGCCTTT 60.094 50.000 12.58 0.00 37.73 3.11
8447 8548 1.480954 CACCATACGTGTCTAGGCCTT 59.519 52.381 12.58 0.00 37.73 4.35
8448 8549 1.112113 CACCATACGTGTCTAGGCCT 58.888 55.000 11.78 11.78 37.73 5.19
8449 8550 0.104304 CCACCATACGTGTCTAGGCC 59.896 60.000 0.00 0.00 41.26 5.19
8450 8551 0.529992 GCCACCATACGTGTCTAGGC 60.530 60.000 0.00 2.51 41.26 3.93
8451 8552 0.104304 GGCCACCATACGTGTCTAGG 59.896 60.000 0.00 0.00 41.26 3.02
8452 8553 1.112113 AGGCCACCATACGTGTCTAG 58.888 55.000 5.01 0.00 41.26 2.43
8453 8554 1.479323 GAAGGCCACCATACGTGTCTA 59.521 52.381 5.01 0.00 41.26 2.59
8454 8555 0.249398 GAAGGCCACCATACGTGTCT 59.751 55.000 5.01 0.00 41.26 3.41
8537 8638 4.989279 AGAACTTGAAACATGCACACTT 57.011 36.364 0.00 0.00 0.00 3.16
8545 8646 7.117667 GTGGTTTTCAACAAGAACTTGAAACAT 59.882 33.333 19.35 0.00 43.83 2.71
8546 8647 6.422400 GTGGTTTTCAACAAGAACTTGAAACA 59.578 34.615 19.35 9.73 43.83 2.83
8586 8687 7.621567 CGTAAAATTCGCAAAACACAATAATCG 59.378 33.333 0.00 0.00 0.00 3.34
8587 8688 8.631695 TCGTAAAATTCGCAAAACACAATAATC 58.368 29.630 0.00 0.00 0.00 1.75
8588 8689 8.508800 TCGTAAAATTCGCAAAACACAATAAT 57.491 26.923 0.00 0.00 0.00 1.28
8590 8691 7.096558 GGTTCGTAAAATTCGCAAAACACAATA 60.097 33.333 0.00 0.00 0.00 1.90
8591 8692 6.291902 GGTTCGTAAAATTCGCAAAACACAAT 60.292 34.615 0.00 0.00 0.00 2.71
8594 8695 4.499758 TGGTTCGTAAAATTCGCAAAACAC 59.500 37.500 0.00 0.00 0.00 3.32
8596 8697 5.623174 TTGGTTCGTAAAATTCGCAAAAC 57.377 34.783 0.00 0.00 0.00 2.43
8597 8698 6.034591 TCTTTGGTTCGTAAAATTCGCAAAA 58.965 32.000 0.00 0.00 0.00 2.44
8598 8699 5.579718 TCTTTGGTTCGTAAAATTCGCAAA 58.420 33.333 0.00 0.00 0.00 3.68
8599 8700 5.171147 TCTTTGGTTCGTAAAATTCGCAA 57.829 34.783 0.00 0.00 0.00 4.85
8601 8702 4.156182 CCTCTTTGGTTCGTAAAATTCGC 58.844 43.478 0.00 0.00 0.00 4.70
8602 8703 4.156182 GCCTCTTTGGTTCGTAAAATTCG 58.844 43.478 0.00 0.00 38.35 3.34
8603 8704 4.482386 GGCCTCTTTGGTTCGTAAAATTC 58.518 43.478 0.00 0.00 38.35 2.17
8604 8705 3.257375 GGGCCTCTTTGGTTCGTAAAATT 59.743 43.478 0.84 0.00 38.35 1.82
8605 8706 2.823747 GGGCCTCTTTGGTTCGTAAAAT 59.176 45.455 0.84 0.00 38.35 1.82
8607 8708 1.422402 AGGGCCTCTTTGGTTCGTAAA 59.578 47.619 0.00 0.00 38.35 2.01
8608 8709 1.061546 AGGGCCTCTTTGGTTCGTAA 58.938 50.000 0.00 0.00 38.35 3.18
8611 8712 1.668419 CATAGGGCCTCTTTGGTTCG 58.332 55.000 10.74 0.00 38.35 3.95
8612 8713 1.340991 TGCATAGGGCCTCTTTGGTTC 60.341 52.381 10.74 0.00 43.89 3.62
8613 8714 0.704076 TGCATAGGGCCTCTTTGGTT 59.296 50.000 10.74 0.00 43.89 3.67
8615 8716 1.325355 CATGCATAGGGCCTCTTTGG 58.675 55.000 10.74 0.00 43.89 3.28
8616 8717 0.672342 GCATGCATAGGGCCTCTTTG 59.328 55.000 10.74 8.10 43.89 2.77
8617 8718 0.468771 GGCATGCATAGGGCCTCTTT 60.469 55.000 21.36 0.00 44.32 2.52
8618 8719 1.152368 GGCATGCATAGGGCCTCTT 59.848 57.895 21.36 0.00 44.32 2.85
8619 8720 2.842058 GGCATGCATAGGGCCTCT 59.158 61.111 21.36 0.00 44.32 3.69
8623 8724 1.631405 TAATTGGGCATGCATAGGGC 58.369 50.000 21.36 0.00 45.13 5.19
8624 8725 6.407299 GGAATAATAATTGGGCATGCATAGGG 60.407 42.308 21.36 0.00 0.00 3.53
8625 8726 6.381994 AGGAATAATAATTGGGCATGCATAGG 59.618 38.462 21.36 0.00 0.00 2.57
8626 8727 7.414222 AGGAATAATAATTGGGCATGCATAG 57.586 36.000 21.36 0.00 0.00 2.23
8628 8729 6.691255 AAGGAATAATAATTGGGCATGCAT 57.309 33.333 21.36 0.85 0.00 3.96
8629 8730 6.552725 TGTAAGGAATAATAATTGGGCATGCA 59.447 34.615 21.36 0.00 0.00 3.96
8630 8731 6.991938 TGTAAGGAATAATAATTGGGCATGC 58.008 36.000 9.90 9.90 0.00 4.06
8631 8732 9.829507 TTTTGTAAGGAATAATAATTGGGCATG 57.170 29.630 0.00 0.00 0.00 4.06
8633 8734 9.883142 CTTTTTGTAAGGAATAATAATTGGGCA 57.117 29.630 0.00 0.00 0.00 5.36
8634 8735 9.325198 CCTTTTTGTAAGGAATAATAATTGGGC 57.675 33.333 0.00 0.00 39.81 5.36
8635 8736 9.830975 CCCTTTTTGTAAGGAATAATAATTGGG 57.169 33.333 5.15 0.00 39.81 4.12
8639 8740 8.410912 GCGACCCTTTTTGTAAGGAATAATAAT 58.589 33.333 5.15 0.00 39.81 1.28
8640 8741 7.612633 AGCGACCCTTTTTGTAAGGAATAATAA 59.387 33.333 5.15 0.00 39.81 1.40
8641 8742 7.066525 CAGCGACCCTTTTTGTAAGGAATAATA 59.933 37.037 5.15 0.00 39.81 0.98
8642 8743 5.949952 AGCGACCCTTTTTGTAAGGAATAAT 59.050 36.000 5.15 0.00 39.81 1.28
8643 8744 5.182380 CAGCGACCCTTTTTGTAAGGAATAA 59.818 40.000 5.15 0.00 39.81 1.40
8645 8746 3.506067 CAGCGACCCTTTTTGTAAGGAAT 59.494 43.478 5.15 0.00 39.81 3.01
8662 8802 4.991687 TGTGTGTGTGTAAATAATCAGCGA 59.008 37.500 0.00 0.00 0.00 4.93
8664 8804 5.851177 GTGTGTGTGTGTGTAAATAATCAGC 59.149 40.000 0.00 0.00 0.00 4.26
8686 8826 4.081476 TCTCTCTCTCTCTCTCTCTGTGTG 60.081 50.000 0.00 0.00 0.00 3.82
8687 8827 4.096681 TCTCTCTCTCTCTCTCTCTGTGT 58.903 47.826 0.00 0.00 0.00 3.72
8688 8828 4.403752 TCTCTCTCTCTCTCTCTCTCTGTG 59.596 50.000 0.00 0.00 0.00 3.66
8689 8829 4.614475 TCTCTCTCTCTCTCTCTCTCTGT 58.386 47.826 0.00 0.00 0.00 3.41
8690 8830 4.892345 TCTCTCTCTCTCTCTCTCTCTCTG 59.108 50.000 0.00 0.00 0.00 3.35
8718 8858 5.503194 GCTTTGTTGTTGTTGTTGTTGTTGT 60.503 36.000 0.00 0.00 0.00 3.32
8719 8859 4.903016 GCTTTGTTGTTGTTGTTGTTGTTG 59.097 37.500 0.00 0.00 0.00 3.33
8720 8860 4.024472 GGCTTTGTTGTTGTTGTTGTTGTT 60.024 37.500 0.00 0.00 0.00 2.83
8721 8861 3.496507 GGCTTTGTTGTTGTTGTTGTTGT 59.503 39.130 0.00 0.00 0.00 3.32
8722 8862 3.745458 AGGCTTTGTTGTTGTTGTTGTTG 59.255 39.130 0.00 0.00 0.00 3.33
8723 8863 4.001618 AGGCTTTGTTGTTGTTGTTGTT 57.998 36.364 0.00 0.00 0.00 2.83
8724 8864 3.676291 AGGCTTTGTTGTTGTTGTTGT 57.324 38.095 0.00 0.00 0.00 3.32
8725 8865 5.637387 ACTAAAGGCTTTGTTGTTGTTGTTG 59.363 36.000 22.32 0.00 0.00 3.33
8726 8866 5.789521 ACTAAAGGCTTTGTTGTTGTTGTT 58.210 33.333 22.32 0.00 0.00 2.83
8727 8867 5.400066 ACTAAAGGCTTTGTTGTTGTTGT 57.600 34.783 22.32 0.00 0.00 3.32
8728 8868 4.803613 GGACTAAAGGCTTTGTTGTTGTTG 59.196 41.667 22.32 0.00 0.00 3.33
8729 8869 4.142026 GGGACTAAAGGCTTTGTTGTTGTT 60.142 41.667 22.32 0.00 0.00 2.83
8730 8870 3.383505 GGGACTAAAGGCTTTGTTGTTGT 59.616 43.478 22.32 10.58 0.00 3.32
8731 8871 3.383185 TGGGACTAAAGGCTTTGTTGTTG 59.617 43.478 22.32 7.79 0.00 3.33
8732 8872 3.637769 TGGGACTAAAGGCTTTGTTGTT 58.362 40.909 22.32 1.84 0.00 2.83
8733 8873 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
8734 8874 4.142049 TGTTTGGGACTAAAGGCTTTGTTG 60.142 41.667 22.32 13.85 0.00 3.33
8735 8875 4.027437 TGTTTGGGACTAAAGGCTTTGTT 58.973 39.130 22.32 8.73 0.00 2.83
8736 8876 3.637769 TGTTTGGGACTAAAGGCTTTGT 58.362 40.909 22.32 16.86 0.00 2.83
8737 8877 4.099419 ACTTGTTTGGGACTAAAGGCTTTG 59.901 41.667 22.32 13.97 0.00 2.77
8738 8878 4.286707 ACTTGTTTGGGACTAAAGGCTTT 58.713 39.130 17.76 17.76 0.00 3.51
8739 8879 3.910989 ACTTGTTTGGGACTAAAGGCTT 58.089 40.909 0.00 0.00 0.00 4.35
8740 8880 3.595190 ACTTGTTTGGGACTAAAGGCT 57.405 42.857 0.00 0.00 0.00 4.58
8741 8881 3.977427 CAACTTGTTTGGGACTAAAGGC 58.023 45.455 0.00 0.00 0.00 4.35
8752 8892 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
8753 8893 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
8754 8894 2.572104 CTCTAGCCTACCCCAACTTGTT 59.428 50.000 0.00 0.00 0.00 2.83
8755 8895 2.188817 CTCTAGCCTACCCCAACTTGT 58.811 52.381 0.00 0.00 0.00 3.16
8756 8896 2.432510 CTCTCTAGCCTACCCCAACTTG 59.567 54.545 0.00 0.00 0.00 3.16
8757 8897 2.315155 TCTCTCTAGCCTACCCCAACTT 59.685 50.000 0.00 0.00 0.00 2.66
8758 8898 1.930914 TCTCTCTAGCCTACCCCAACT 59.069 52.381 0.00 0.00 0.00 3.16
8759 8899 2.091775 TCTCTCTCTAGCCTACCCCAAC 60.092 54.545 0.00 0.00 0.00 3.77
8760 8900 2.175931 CTCTCTCTCTAGCCTACCCCAA 59.824 54.545 0.00 0.00 0.00 4.12
8761 8901 1.777878 CTCTCTCTCTAGCCTACCCCA 59.222 57.143 0.00 0.00 0.00 4.96
8762 8902 2.039879 CTCTCTCTCTCTAGCCTACCCC 59.960 59.091 0.00 0.00 0.00 4.95
8763 8903 2.976882 TCTCTCTCTCTCTAGCCTACCC 59.023 54.545 0.00 0.00 0.00 3.69
8764 8904 3.901844 TCTCTCTCTCTCTCTAGCCTACC 59.098 52.174 0.00 0.00 0.00 3.18
8765 8905 4.833380 TCTCTCTCTCTCTCTCTAGCCTAC 59.167 50.000 0.00 0.00 0.00 3.18
8766 8906 5.074746 TCTCTCTCTCTCTCTCTAGCCTA 57.925 47.826 0.00 0.00 0.00 3.93
8767 8907 3.900601 CTCTCTCTCTCTCTCTCTAGCCT 59.099 52.174 0.00 0.00 0.00 4.58
8768 8908 3.898123 TCTCTCTCTCTCTCTCTCTAGCC 59.102 52.174 0.00 0.00 0.00 3.93
8769 8909 4.830046 TCTCTCTCTCTCTCTCTCTCTAGC 59.170 50.000 0.00 0.00 0.00 3.42
8770 8910 6.968263 TTCTCTCTCTCTCTCTCTCTCTAG 57.032 45.833 0.00 0.00 0.00 2.43
8771 8911 9.607333 AATATTCTCTCTCTCTCTCTCTCTCTA 57.393 37.037 0.00 0.00 0.00 2.43
8772 8912 8.503428 AATATTCTCTCTCTCTCTCTCTCTCT 57.497 38.462 0.00 0.00 0.00 3.10
8824 8964 4.216411 TCTGGTTTGTATCTTAGGCCAC 57.784 45.455 5.01 0.00 0.00 5.01
8825 8965 4.843728 CTTCTGGTTTGTATCTTAGGCCA 58.156 43.478 5.01 0.00 0.00 5.36
8826 8966 3.628032 GCTTCTGGTTTGTATCTTAGGCC 59.372 47.826 0.00 0.00 0.00 5.19
8827 8967 3.309954 CGCTTCTGGTTTGTATCTTAGGC 59.690 47.826 0.00 0.00 0.00 3.93
8828 8968 4.755411 TCGCTTCTGGTTTGTATCTTAGG 58.245 43.478 0.00 0.00 0.00 2.69
8829 8969 4.806247 CCTCGCTTCTGGTTTGTATCTTAG 59.194 45.833 0.00 0.00 0.00 2.18
8830 8970 4.382685 CCCTCGCTTCTGGTTTGTATCTTA 60.383 45.833 0.00 0.00 0.00 2.10
8831 8971 3.600388 CCTCGCTTCTGGTTTGTATCTT 58.400 45.455 0.00 0.00 0.00 2.40
8832 8972 2.093447 CCCTCGCTTCTGGTTTGTATCT 60.093 50.000 0.00 0.00 0.00 1.98
8833 8973 2.093658 TCCCTCGCTTCTGGTTTGTATC 60.094 50.000 0.00 0.00 0.00 2.24
8834 8974 1.906574 TCCCTCGCTTCTGGTTTGTAT 59.093 47.619 0.00 0.00 0.00 2.29
8844 8984 5.068067 AGAGAAAATACTACTCCCTCGCTTC 59.932 44.000 0.00 0.00 0.00 3.86



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.