Multiple sequence alignment - TraesCS5A01G004500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G004500 | chr5A | 100.000 | 8971 | 0 | 0 | 1 | 8971 | 3166148 | 3175118 | 0.000000e+00 | 16567.0 |
1 | TraesCS5A01G004500 | chr5A | 97.725 | 3692 | 79 | 4 | 3120 | 6809 | 39713215 | 39716903 | 0.000000e+00 | 6348.0 |
2 | TraesCS5A01G004500 | chr5A | 86.647 | 996 | 127 | 2 | 6958 | 7953 | 3176524 | 3177513 | 0.000000e+00 | 1098.0 |
3 | TraesCS5A01G004500 | chr5A | 85.312 | 994 | 136 | 8 | 6955 | 7946 | 3411522 | 3410537 | 0.000000e+00 | 1018.0 |
4 | TraesCS5A01G004500 | chr5A | 85.088 | 570 | 72 | 8 | 1673 | 2231 | 3175871 | 3176438 | 3.630000e-158 | 569.0 |
5 | TraesCS5A01G004500 | chr5A | 94.603 | 315 | 15 | 2 | 2266 | 2579 | 602624940 | 602625253 | 3.770000e-133 | 486.0 |
6 | TraesCS5A01G004500 | chr5A | 94.304 | 316 | 13 | 3 | 2266 | 2579 | 576824718 | 576825030 | 6.300000e-131 | 479.0 |
7 | TraesCS5A01G004500 | chr5A | 78.075 | 187 | 17 | 16 | 2601 | 2781 | 219304892 | 219304724 | 7.410000e-16 | 97.1 |
8 | TraesCS5A01G004500 | chr5A | 100.000 | 29 | 0 | 0 | 1540 | 1568 | 3167330 | 3167358 | 5.000000e-03 | 54.7 |
9 | TraesCS5A01G004500 | chr5A | 100.000 | 29 | 0 | 0 | 1183 | 1211 | 3167687 | 3167715 | 5.000000e-03 | 54.7 |
10 | TraesCS5A01G004500 | chr3A | 97.589 | 3691 | 86 | 3 | 3120 | 6808 | 729822599 | 729826288 | 0.000000e+00 | 6320.0 |
11 | TraesCS5A01G004500 | chr3A | 97.563 | 3693 | 85 | 4 | 3120 | 6808 | 708738356 | 708742047 | 0.000000e+00 | 6316.0 |
12 | TraesCS5A01G004500 | chr3A | 91.353 | 532 | 43 | 3 | 2591 | 3120 | 302915920 | 302916450 | 0.000000e+00 | 725.0 |
13 | TraesCS5A01G004500 | chr3A | 94.304 | 316 | 13 | 3 | 2266 | 2579 | 127983355 | 127983667 | 6.300000e-131 | 479.0 |
14 | TraesCS5A01G004500 | chr3A | 93.987 | 316 | 17 | 2 | 2265 | 2579 | 729248096 | 729247782 | 2.270000e-130 | 477.0 |
15 | TraesCS5A01G004500 | chr2A | 97.537 | 3695 | 84 | 5 | 3120 | 6808 | 548940254 | 548943947 | 0.000000e+00 | 6312.0 |
16 | TraesCS5A01G004500 | chr2A | 97.486 | 3700 | 78 | 9 | 3123 | 6811 | 42730710 | 42727015 | 0.000000e+00 | 6303.0 |
17 | TraesCS5A01G004500 | chr2A | 73.991 | 223 | 48 | 8 | 2011 | 2228 | 15633820 | 15634037 | 2.080000e-11 | 82.4 |
18 | TraesCS5A01G004500 | chr6A | 97.560 | 3688 | 87 | 3 | 3123 | 6808 | 242536912 | 242533226 | 0.000000e+00 | 6309.0 |
19 | TraesCS5A01G004500 | chr6A | 97.507 | 3691 | 87 | 4 | 3120 | 6808 | 22782147 | 22785834 | 0.000000e+00 | 6301.0 |
20 | TraesCS5A01G004500 | chr6A | 94.855 | 311 | 13 | 3 | 2266 | 2575 | 19060175 | 19060483 | 4.870000e-132 | 483.0 |
21 | TraesCS5A01G004500 | chr6A | 94.286 | 315 | 16 | 2 | 2266 | 2579 | 15973579 | 15973266 | 1.750000e-131 | 481.0 |
22 | TraesCS5A01G004500 | chr6A | 94.044 | 319 | 15 | 3 | 2263 | 2579 | 571343982 | 571343666 | 1.750000e-131 | 481.0 |
23 | TraesCS5A01G004500 | chr6A | 97.015 | 67 | 1 | 1 | 8710 | 8776 | 51002043 | 51001978 | 2.650000e-20 | 111.0 |
24 | TraesCS5A01G004500 | chr7A | 97.533 | 3689 | 87 | 4 | 3123 | 6808 | 2352622 | 2348935 | 0.000000e+00 | 6305.0 |
25 | TraesCS5A01G004500 | chr7A | 97.507 | 3691 | 87 | 4 | 3120 | 6808 | 92780619 | 92784306 | 0.000000e+00 | 6301.0 |
26 | TraesCS5A01G004500 | chr7A | 99.812 | 533 | 1 | 0 | 2591 | 3123 | 30992095 | 30991563 | 0.000000e+00 | 979.0 |
27 | TraesCS5A01G004500 | chr7A | 93.135 | 437 | 21 | 6 | 2679 | 3107 | 21087193 | 21087628 | 4.570000e-177 | 632.0 |
28 | TraesCS5A01G004500 | chr7A | 75.991 | 429 | 99 | 4 | 7497 | 7923 | 546424414 | 546423988 | 1.520000e-52 | 219.0 |
29 | TraesCS5A01G004500 | chr7A | 94.521 | 73 | 3 | 1 | 8705 | 8776 | 342815181 | 342815109 | 2.650000e-20 | 111.0 |
30 | TraesCS5A01G004500 | chr7A | 100.000 | 57 | 0 | 0 | 8720 | 8776 | 494496769 | 494496713 | 1.230000e-18 | 106.0 |
31 | TraesCS5A01G004500 | chr7A | 81.132 | 106 | 16 | 3 | 1419 | 1522 | 625378084 | 625378187 | 2.080000e-11 | 82.4 |
32 | TraesCS5A01G004500 | chr5D | 95.859 | 1787 | 50 | 7 | 6809 | 8594 | 6484221 | 6482458 | 0.000000e+00 | 2868.0 |
33 | TraesCS5A01G004500 | chr5D | 95.700 | 1465 | 53 | 10 | 806 | 2265 | 6485678 | 6484219 | 0.000000e+00 | 2348.0 |
34 | TraesCS5A01G004500 | chr5D | 89.529 | 1146 | 118 | 2 | 6827 | 7972 | 5367868 | 5369011 | 0.000000e+00 | 1450.0 |
35 | TraesCS5A01G004500 | chr5D | 95.391 | 716 | 17 | 7 | 54 | 753 | 6486382 | 6485667 | 0.000000e+00 | 1125.0 |
36 | TraesCS5A01G004500 | chr5D | 86.284 | 1028 | 131 | 3 | 6958 | 7981 | 6480885 | 6479864 | 0.000000e+00 | 1109.0 |
37 | TraesCS5A01G004500 | chr5D | 85.689 | 566 | 72 | 5 | 1673 | 2229 | 6481536 | 6480971 | 1.000000e-163 | 588.0 |
38 | TraesCS5A01G004500 | chr5D | 93.467 | 199 | 2 | 1 | 8773 | 8971 | 6482298 | 6482111 | 1.470000e-72 | 285.0 |
39 | TraesCS5A01G004500 | chr5D | 100.000 | 30 | 0 | 0 | 1182 | 1211 | 6484945 | 6484916 | 1.000000e-03 | 56.5 |
40 | TraesCS5A01G004500 | chr5D | 100.000 | 29 | 0 | 0 | 1540 | 1568 | 6485299 | 6485271 | 5.000000e-03 | 54.7 |
41 | TraesCS5A01G004500 | chr5B | 84.522 | 1066 | 149 | 11 | 6923 | 7981 | 6419433 | 6418377 | 0.000000e+00 | 1040.0 |
42 | TraesCS5A01G004500 | chr7B | 92.190 | 525 | 27 | 8 | 2591 | 3107 | 742561074 | 742560556 | 0.000000e+00 | 730.0 |
43 | TraesCS5A01G004500 | chr7B | 93.805 | 452 | 26 | 2 | 2658 | 3107 | 652058629 | 652058178 | 0.000000e+00 | 678.0 |
44 | TraesCS5A01G004500 | chr7B | 88.938 | 226 | 22 | 3 | 1282 | 1506 | 586333531 | 586333308 | 8.870000e-70 | 276.0 |
45 | TraesCS5A01G004500 | chr7B | 75.128 | 390 | 93 | 4 | 7497 | 7884 | 467975462 | 467975849 | 7.160000e-41 | 180.0 |
46 | TraesCS5A01G004500 | chr7B | 95.652 | 69 | 1 | 2 | 8709 | 8776 | 88863418 | 88863485 | 9.520000e-20 | 110.0 |
47 | TraesCS5A01G004500 | chr7B | 83.019 | 106 | 14 | 3 | 1419 | 1522 | 586333426 | 586333529 | 9.590000e-15 | 93.5 |
48 | TraesCS5A01G004500 | chr4D | 90.824 | 534 | 43 | 3 | 2587 | 3118 | 207543306 | 207542777 | 0.000000e+00 | 710.0 |
49 | TraesCS5A01G004500 | chr4D | 98.462 | 65 | 0 | 1 | 8713 | 8776 | 14652334 | 14652270 | 7.360000e-21 | 113.0 |
50 | TraesCS5A01G004500 | chr4D | 100.000 | 61 | 0 | 0 | 8716 | 8776 | 295019730 | 295019790 | 7.360000e-21 | 113.0 |
51 | TraesCS5A01G004500 | chr4D | 100.000 | 60 | 0 | 0 | 8718 | 8777 | 470854818 | 470854877 | 2.650000e-20 | 111.0 |
52 | TraesCS5A01G004500 | chr4D | 96.923 | 65 | 2 | 0 | 8712 | 8776 | 10263524 | 10263588 | 9.520000e-20 | 110.0 |
53 | TraesCS5A01G004500 | chr4B | 90.056 | 533 | 26 | 12 | 2618 | 3123 | 117781457 | 117780925 | 0.000000e+00 | 665.0 |
54 | TraesCS5A01G004500 | chr4B | 100.000 | 60 | 0 | 0 | 8717 | 8776 | 217278165 | 217278106 | 2.650000e-20 | 111.0 |
55 | TraesCS5A01G004500 | chr4B | 98.387 | 62 | 0 | 1 | 8715 | 8776 | 498403954 | 498403894 | 3.420000e-19 | 108.0 |
56 | TraesCS5A01G004500 | chr4A | 94.304 | 316 | 15 | 3 | 2266 | 2579 | 586723274 | 586722960 | 1.750000e-131 | 481.0 |
57 | TraesCS5A01G004500 | chr1A | 94.044 | 319 | 13 | 3 | 2266 | 2582 | 7610980 | 7610666 | 6.300000e-131 | 479.0 |
58 | TraesCS5A01G004500 | chr1A | 100.000 | 61 | 0 | 0 | 8716 | 8776 | 244176476 | 244176536 | 7.360000e-21 | 113.0 |
59 | TraesCS5A01G004500 | chr1A | 98.438 | 64 | 0 | 1 | 8718 | 8781 | 593280535 | 593280473 | 2.650000e-20 | 111.0 |
60 | TraesCS5A01G004500 | chr1A | 96.970 | 66 | 1 | 1 | 8711 | 8776 | 107104640 | 107104576 | 9.520000e-20 | 110.0 |
61 | TraesCS5A01G004500 | chr1A | 100.000 | 59 | 0 | 0 | 8718 | 8776 | 464809062 | 464809004 | 9.520000e-20 | 110.0 |
62 | TraesCS5A01G004500 | chr7D | 88.000 | 225 | 20 | 4 | 1282 | 1505 | 543384499 | 543384281 | 8.940000e-65 | 259.0 |
63 | TraesCS5A01G004500 | chr7D | 82.075 | 106 | 15 | 3 | 1419 | 1522 | 543384394 | 543384497 | 4.460000e-13 | 87.9 |
64 | TraesCS5A01G004500 | chr6B | 100.000 | 64 | 0 | 0 | 8713 | 8776 | 185012697 | 185012760 | 1.580000e-22 | 119.0 |
65 | TraesCS5A01G004500 | chr6B | 90.588 | 85 | 6 | 2 | 8693 | 8776 | 50706874 | 50706957 | 2.650000e-20 | 111.0 |
66 | TraesCS5A01G004500 | chr6B | 94.366 | 71 | 4 | 0 | 8706 | 8776 | 82163083 | 82163153 | 9.520000e-20 | 110.0 |
67 | TraesCS5A01G004500 | chr3B | 98.462 | 65 | 0 | 1 | 8713 | 8776 | 452975659 | 452975723 | 7.360000e-21 | 113.0 |
68 | TraesCS5A01G004500 | chr3B | 96.970 | 66 | 2 | 0 | 8711 | 8776 | 640061891 | 640061956 | 2.650000e-20 | 111.0 |
69 | TraesCS5A01G004500 | chr2B | 95.714 | 70 | 3 | 0 | 8707 | 8776 | 691641064 | 691641133 | 7.360000e-21 | 113.0 |
70 | TraesCS5A01G004500 | chr2B | 100.000 | 59 | 0 | 0 | 8718 | 8776 | 514279847 | 514279789 | 9.520000e-20 | 110.0 |
71 | TraesCS5A01G004500 | chr1B | 96.970 | 66 | 2 | 0 | 8711 | 8776 | 39685461 | 39685526 | 2.650000e-20 | 111.0 |
72 | TraesCS5A01G004500 | chrUn | 100.000 | 59 | 0 | 0 | 8718 | 8776 | 1035689 | 1035747 | 9.520000e-20 | 110.0 |
73 | TraesCS5A01G004500 | chrUn | 100.000 | 59 | 0 | 0 | 8718 | 8776 | 11913545 | 11913487 | 9.520000e-20 | 110.0 |
74 | TraesCS5A01G004500 | chrUn | 100.000 | 59 | 0 | 0 | 8718 | 8776 | 17582095 | 17582153 | 9.520000e-20 | 110.0 |
75 | TraesCS5A01G004500 | chrUn | 100.000 | 59 | 0 | 0 | 8718 | 8776 | 27366602 | 27366660 | 9.520000e-20 | 110.0 |
76 | TraesCS5A01G004500 | chrUn | 100.000 | 59 | 0 | 0 | 8718 | 8776 | 49493996 | 49493938 | 9.520000e-20 | 110.0 |
77 | TraesCS5A01G004500 | chrUn | 100.000 | 59 | 0 | 0 | 8718 | 8776 | 86972281 | 86972339 | 9.520000e-20 | 110.0 |
78 | TraesCS5A01G004500 | chrUn | 100.000 | 59 | 0 | 0 | 8718 | 8776 | 349855638 | 349855696 | 9.520000e-20 | 110.0 |
79 | TraesCS5A01G004500 | chrUn | 100.000 | 59 | 0 | 0 | 8718 | 8776 | 356902578 | 356902520 | 9.520000e-20 | 110.0 |
80 | TraesCS5A01G004500 | chrUn | 100.000 | 59 | 0 | 0 | 8718 | 8776 | 406809124 | 406809066 | 9.520000e-20 | 110.0 |
81 | TraesCS5A01G004500 | chr6D | 98.387 | 62 | 1 | 0 | 8715 | 8776 | 153190769 | 153190830 | 9.520000e-20 | 110.0 |
82 | TraesCS5A01G004500 | chr6D | 95.652 | 69 | 2 | 1 | 8708 | 8776 | 269703788 | 269703855 | 9.520000e-20 | 110.0 |
83 | TraesCS5A01G004500 | chr2D | 93.421 | 76 | 2 | 3 | 8703 | 8776 | 172402751 | 172402825 | 9.520000e-20 | 110.0 |
84 | TraesCS5A01G004500 | chr2D | 93.243 | 74 | 1 | 4 | 8704 | 8776 | 163017133 | 163017063 | 1.230000e-18 | 106.0 |
85 | TraesCS5A01G004500 | chr1D | 98.413 | 63 | 0 | 1 | 8715 | 8776 | 73687988 | 73687926 | 9.520000e-20 | 110.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G004500 | chr5A | 3166148 | 3175118 | 8970 | False | 16567.000 | 16567 | 100.00000 | 1 | 8971 | 1 | chr5A.!!$F1 | 8970 |
1 | TraesCS5A01G004500 | chr5A | 39713215 | 39716903 | 3688 | False | 6348.000 | 6348 | 97.72500 | 3120 | 6809 | 1 | chr5A.!!$F2 | 3689 |
2 | TraesCS5A01G004500 | chr5A | 3410537 | 3411522 | 985 | True | 1018.000 | 1018 | 85.31200 | 6955 | 7946 | 1 | chr5A.!!$R1 | 991 |
3 | TraesCS5A01G004500 | chr5A | 3175871 | 3177513 | 1642 | False | 833.500 | 1098 | 85.86750 | 1673 | 7953 | 2 | chr5A.!!$F6 | 6280 |
4 | TraesCS5A01G004500 | chr3A | 729822599 | 729826288 | 3689 | False | 6320.000 | 6320 | 97.58900 | 3120 | 6808 | 1 | chr3A.!!$F4 | 3688 |
5 | TraesCS5A01G004500 | chr3A | 708738356 | 708742047 | 3691 | False | 6316.000 | 6316 | 97.56300 | 3120 | 6808 | 1 | chr3A.!!$F3 | 3688 |
6 | TraesCS5A01G004500 | chr3A | 302915920 | 302916450 | 530 | False | 725.000 | 725 | 91.35300 | 2591 | 3120 | 1 | chr3A.!!$F2 | 529 |
7 | TraesCS5A01G004500 | chr2A | 548940254 | 548943947 | 3693 | False | 6312.000 | 6312 | 97.53700 | 3120 | 6808 | 1 | chr2A.!!$F2 | 3688 |
8 | TraesCS5A01G004500 | chr2A | 42727015 | 42730710 | 3695 | True | 6303.000 | 6303 | 97.48600 | 3123 | 6811 | 1 | chr2A.!!$R1 | 3688 |
9 | TraesCS5A01G004500 | chr6A | 242533226 | 242536912 | 3686 | True | 6309.000 | 6309 | 97.56000 | 3123 | 6808 | 1 | chr6A.!!$R3 | 3685 |
10 | TraesCS5A01G004500 | chr6A | 22782147 | 22785834 | 3687 | False | 6301.000 | 6301 | 97.50700 | 3120 | 6808 | 1 | chr6A.!!$F2 | 3688 |
11 | TraesCS5A01G004500 | chr7A | 2348935 | 2352622 | 3687 | True | 6305.000 | 6305 | 97.53300 | 3123 | 6808 | 1 | chr7A.!!$R1 | 3685 |
12 | TraesCS5A01G004500 | chr7A | 92780619 | 92784306 | 3687 | False | 6301.000 | 6301 | 97.50700 | 3120 | 6808 | 1 | chr7A.!!$F2 | 3688 |
13 | TraesCS5A01G004500 | chr7A | 30991563 | 30992095 | 532 | True | 979.000 | 979 | 99.81200 | 2591 | 3123 | 1 | chr7A.!!$R2 | 532 |
14 | TraesCS5A01G004500 | chr5D | 5367868 | 5369011 | 1143 | False | 1450.000 | 1450 | 89.52900 | 6827 | 7972 | 1 | chr5D.!!$F1 | 1145 |
15 | TraesCS5A01G004500 | chr5D | 6479864 | 6486382 | 6518 | True | 1054.275 | 2868 | 94.04875 | 54 | 8971 | 8 | chr5D.!!$R1 | 8917 |
16 | TraesCS5A01G004500 | chr5B | 6418377 | 6419433 | 1056 | True | 1040.000 | 1040 | 84.52200 | 6923 | 7981 | 1 | chr5B.!!$R1 | 1058 |
17 | TraesCS5A01G004500 | chr7B | 742560556 | 742561074 | 518 | True | 730.000 | 730 | 92.19000 | 2591 | 3107 | 1 | chr7B.!!$R3 | 516 |
18 | TraesCS5A01G004500 | chr4D | 207542777 | 207543306 | 529 | True | 710.000 | 710 | 90.82400 | 2587 | 3118 | 1 | chr4D.!!$R2 | 531 |
19 | TraesCS5A01G004500 | chr4B | 117780925 | 117781457 | 532 | True | 665.000 | 665 | 90.05600 | 2618 | 3123 | 1 | chr4B.!!$R1 | 505 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
654 | 666 | 0.687354 | CTTGGTACCCTGCACTCACT | 59.313 | 55.000 | 10.07 | 0.00 | 0.00 | 3.41 | F |
1370 | 1388 | 0.170116 | TGCGCGGATGTCCATTTTTC | 59.830 | 50.000 | 8.83 | 0.00 | 35.14 | 2.29 | F |
2321 | 2349 | 0.035739 | GGTCCTTTAGTGCCGGTTCA | 59.964 | 55.000 | 1.90 | 0.00 | 0.00 | 3.18 | F |
2323 | 2351 | 0.323629 | TCCTTTAGTGCCGGTTCAGG | 59.676 | 55.000 | 1.90 | 0.40 | 0.00 | 3.86 | F |
2324 | 2352 | 0.323629 | CCTTTAGTGCCGGTTCAGGA | 59.676 | 55.000 | 1.90 | 0.00 | 0.00 | 3.86 | F |
2413 | 2441 | 0.458260 | AAAAGGAAACCACGTGGCAC | 59.542 | 50.000 | 34.26 | 23.29 | 39.32 | 5.01 | F |
2454 | 2482 | 0.616891 | AGCCCTTTAGTACCGGTTGG | 59.383 | 55.000 | 15.04 | 5.94 | 42.84 | 3.77 | F |
4666 | 4742 | 0.253327 | GAATCTTCTTCCTGGGGCGT | 59.747 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 | F |
5076 | 5152 | 1.135575 | GCAGTTTCTCTTTGCATCGGG | 60.136 | 52.381 | 0.00 | 0.00 | 37.75 | 5.14 | F |
5890 | 5969 | 1.609555 | CGGTTGGAATTTCCGGTTCAA | 59.390 | 47.619 | 10.79 | 0.00 | 40.17 | 2.69 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1475 | 1494 | 0.031994 | GCACATGGCAAAAGGAACGT | 59.968 | 50.000 | 0.00 | 0.00 | 43.97 | 3.99 | R |
2584 | 2612 | 0.032403 | TTTAGCGCTACCGTGTGTGT | 59.968 | 50.000 | 18.63 | 0.00 | 36.67 | 3.72 | R |
3658 | 3726 | 0.249398 | GGAGGACCAGCAACGTATGT | 59.751 | 55.000 | 0.00 | 0.00 | 35.97 | 2.29 | R |
4068 | 4143 | 1.355971 | CACTGTTTGGACGATACCGG | 58.644 | 55.000 | 0.00 | 0.00 | 40.78 | 5.28 | R |
4636 | 4712 | 3.054361 | GGAAGAAGATTCCTGCCAAGGTA | 60.054 | 47.826 | 0.00 | 0.00 | 44.82 | 3.08 | R |
4666 | 4742 | 3.458163 | GGTGATGTCGAGGGCCGA | 61.458 | 66.667 | 0.00 | 0.00 | 46.35 | 5.54 | R |
5076 | 5152 | 3.326006 | TGATGATCTAGGTCAGGCCATTC | 59.674 | 47.826 | 12.11 | 3.58 | 40.61 | 2.67 | R |
6818 | 6907 | 0.179070 | GAGCTAGAGGCCCTTTTCGG | 60.179 | 60.000 | 0.00 | 0.00 | 43.05 | 4.30 | R |
6819 | 6908 | 0.528684 | CGAGCTAGAGGCCCTTTTCG | 60.529 | 60.000 | 0.00 | 0.00 | 43.05 | 3.46 | R |
8449 | 8550 | 0.104304 | CCACCATACGTGTCTAGGCC | 59.896 | 60.000 | 0.00 | 0.00 | 41.26 | 5.19 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
22 | 23 | 5.850557 | TGCCAATCTTCACTCAAAAGAAA | 57.149 | 34.783 | 0.00 | 0.00 | 36.41 | 2.52 |
23 | 24 | 6.219417 | TGCCAATCTTCACTCAAAAGAAAA | 57.781 | 33.333 | 0.00 | 0.00 | 36.41 | 2.29 |
24 | 25 | 6.638610 | TGCCAATCTTCACTCAAAAGAAAAA | 58.361 | 32.000 | 0.00 | 0.00 | 36.41 | 1.94 |
44 | 45 | 4.647424 | AAAAAGACTGTTGCCAATCGAA | 57.353 | 36.364 | 0.00 | 0.00 | 0.00 | 3.71 |
45 | 46 | 3.626028 | AAAGACTGTTGCCAATCGAAC | 57.374 | 42.857 | 0.00 | 0.00 | 0.00 | 3.95 |
46 | 47 | 2.254546 | AGACTGTTGCCAATCGAACA | 57.745 | 45.000 | 0.00 | 0.00 | 0.00 | 3.18 |
47 | 48 | 2.783135 | AGACTGTTGCCAATCGAACAT | 58.217 | 42.857 | 0.00 | 0.00 | 31.81 | 2.71 |
48 | 49 | 2.485426 | AGACTGTTGCCAATCGAACATG | 59.515 | 45.455 | 0.00 | 0.00 | 31.81 | 3.21 |
49 | 50 | 1.068333 | ACTGTTGCCAATCGAACATGC | 60.068 | 47.619 | 0.00 | 0.00 | 31.81 | 4.06 |
50 | 51 | 0.957362 | TGTTGCCAATCGAACATGCA | 59.043 | 45.000 | 0.00 | 0.00 | 0.00 | 3.96 |
51 | 52 | 1.068402 | TGTTGCCAATCGAACATGCAG | 60.068 | 47.619 | 0.00 | 0.00 | 32.88 | 4.41 |
52 | 53 | 1.068333 | GTTGCCAATCGAACATGCAGT | 60.068 | 47.619 | 0.00 | 0.00 | 32.88 | 4.40 |
126 | 127 | 1.824230 | AGCAGCTAGAGTCTTGACCTG | 59.176 | 52.381 | 5.73 | 5.49 | 0.00 | 4.00 |
175 | 176 | 2.164422 | CTCAGCACGGTCTATCAGTCAA | 59.836 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
266 | 267 | 5.299279 | TGAGGTTTTTCAAAAGAGTAGGCAG | 59.701 | 40.000 | 0.00 | 0.00 | 0.00 | 4.85 |
316 | 317 | 3.251729 | CCCTCGATTCTGTGCAAATATGG | 59.748 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
331 | 332 | 8.446273 | GTGCAAATATGGTGAGCTACATAATAG | 58.554 | 37.037 | 8.70 | 4.35 | 33.69 | 1.73 |
342 | 343 | 7.169982 | GTGAGCTACATAATAGTTAGGCACTTG | 59.830 | 40.741 | 0.00 | 0.00 | 41.75 | 3.16 |
370 | 371 | 6.013293 | ACCTTTCAGTGCTATTTTCTCCTAGT | 60.013 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
480 | 481 | 7.490402 | ACTGAAAAGAGTCAAAGCTCAATTTTG | 59.510 | 33.333 | 0.00 | 0.00 | 37.94 | 2.44 |
592 | 593 | 6.351117 | CCCAAACTGTTACTACTAGCTAGCTT | 60.351 | 42.308 | 24.88 | 8.55 | 0.00 | 3.74 |
593 | 594 | 6.531948 | CCAAACTGTTACTACTAGCTAGCTTG | 59.468 | 42.308 | 24.88 | 23.43 | 0.00 | 4.01 |
594 | 595 | 5.251601 | ACTGTTACTACTAGCTAGCTTGC | 57.748 | 43.478 | 24.88 | 12.54 | 0.00 | 4.01 |
635 | 647 | 9.627395 | CTGGTATAACAGTTAGTCATACATAGC | 57.373 | 37.037 | 9.80 | 0.00 | 33.81 | 2.97 |
642 | 654 | 7.490000 | ACAGTTAGTCATACATAGCTTGGTAC | 58.510 | 38.462 | 0.00 | 0.00 | 0.00 | 3.34 |
646 | 658 | 4.345257 | AGTCATACATAGCTTGGTACCCTG | 59.655 | 45.833 | 10.07 | 2.97 | 0.00 | 4.45 |
647 | 659 | 3.071023 | TCATACATAGCTTGGTACCCTGC | 59.929 | 47.826 | 10.07 | 13.53 | 0.00 | 4.85 |
648 | 660 | 1.285280 | ACATAGCTTGGTACCCTGCA | 58.715 | 50.000 | 22.69 | 12.39 | 0.00 | 4.41 |
650 | 662 | 1.210478 | CATAGCTTGGTACCCTGCACT | 59.790 | 52.381 | 22.69 | 10.84 | 0.00 | 4.40 |
652 | 664 | 1.127567 | AGCTTGGTACCCTGCACTCA | 61.128 | 55.000 | 22.69 | 0.00 | 0.00 | 3.41 |
654 | 666 | 0.687354 | CTTGGTACCCTGCACTCACT | 59.313 | 55.000 | 10.07 | 0.00 | 0.00 | 3.41 |
736 | 752 | 4.070552 | GGCGCTGAGGACGGTTCT | 62.071 | 66.667 | 7.64 | 0.00 | 0.00 | 3.01 |
743 | 759 | 3.550678 | CGCTGAGGACGGTTCTAATTTAC | 59.449 | 47.826 | 0.00 | 0.00 | 0.00 | 2.01 |
747 | 763 | 5.345702 | TGAGGACGGTTCTAATTTACGATG | 58.654 | 41.667 | 0.00 | 0.00 | 0.00 | 3.84 |
748 | 764 | 4.117685 | AGGACGGTTCTAATTTACGATGC | 58.882 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
749 | 765 | 4.117685 | GGACGGTTCTAATTTACGATGCT | 58.882 | 43.478 | 0.00 | 0.00 | 0.00 | 3.79 |
750 | 766 | 5.068198 | AGGACGGTTCTAATTTACGATGCTA | 59.932 | 40.000 | 0.00 | 0.00 | 0.00 | 3.49 |
751 | 767 | 5.174579 | GGACGGTTCTAATTTACGATGCTAC | 59.825 | 44.000 | 0.00 | 0.00 | 0.00 | 3.58 |
752 | 768 | 5.653507 | ACGGTTCTAATTTACGATGCTACA | 58.346 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
753 | 769 | 6.278363 | ACGGTTCTAATTTACGATGCTACAT | 58.722 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
754 | 770 | 6.200286 | ACGGTTCTAATTTACGATGCTACATG | 59.800 | 38.462 | 0.00 | 0.00 | 0.00 | 3.21 |
755 | 771 | 6.419710 | CGGTTCTAATTTACGATGCTACATGA | 59.580 | 38.462 | 0.00 | 0.00 | 0.00 | 3.07 |
756 | 772 | 7.116376 | CGGTTCTAATTTACGATGCTACATGAT | 59.884 | 37.037 | 0.00 | 0.00 | 0.00 | 2.45 |
757 | 773 | 9.419297 | GGTTCTAATTTACGATGCTACATGATA | 57.581 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
782 | 798 | 6.985653 | ATATATGTGAGACACTAACCAGCT | 57.014 | 37.500 | 0.00 | 0.00 | 35.11 | 4.24 |
783 | 799 | 9.755122 | ATATATATGTGAGACACTAACCAGCTA | 57.245 | 33.333 | 0.00 | 0.00 | 35.11 | 3.32 |
784 | 800 | 4.727507 | ATGTGAGACACTAACCAGCTAG | 57.272 | 45.455 | 0.00 | 0.00 | 35.11 | 3.42 |
785 | 801 | 2.231478 | TGTGAGACACTAACCAGCTAGC | 59.769 | 50.000 | 6.62 | 6.62 | 35.11 | 3.42 |
786 | 802 | 2.231478 | GTGAGACACTAACCAGCTAGCA | 59.769 | 50.000 | 18.83 | 0.00 | 0.00 | 3.49 |
787 | 803 | 2.493675 | TGAGACACTAACCAGCTAGCAG | 59.506 | 50.000 | 18.83 | 9.15 | 0.00 | 4.24 |
788 | 804 | 1.827969 | AGACACTAACCAGCTAGCAGG | 59.172 | 52.381 | 23.56 | 23.56 | 0.00 | 4.85 |
789 | 805 | 1.550976 | GACACTAACCAGCTAGCAGGT | 59.449 | 52.381 | 24.98 | 24.98 | 37.43 | 4.00 |
790 | 806 | 2.758979 | GACACTAACCAGCTAGCAGGTA | 59.241 | 50.000 | 29.74 | 16.10 | 34.64 | 3.08 |
791 | 807 | 2.761208 | ACACTAACCAGCTAGCAGGTAG | 59.239 | 50.000 | 29.74 | 25.32 | 34.64 | 3.18 |
792 | 808 | 2.761208 | CACTAACCAGCTAGCAGGTAGT | 59.239 | 50.000 | 29.74 | 25.92 | 34.64 | 2.73 |
793 | 809 | 3.952323 | CACTAACCAGCTAGCAGGTAGTA | 59.048 | 47.826 | 29.74 | 18.78 | 34.64 | 1.82 |
794 | 810 | 4.585162 | CACTAACCAGCTAGCAGGTAGTAT | 59.415 | 45.833 | 29.74 | 17.64 | 34.64 | 2.12 |
795 | 811 | 5.768662 | CACTAACCAGCTAGCAGGTAGTATA | 59.231 | 44.000 | 29.74 | 17.81 | 34.64 | 1.47 |
796 | 812 | 5.769162 | ACTAACCAGCTAGCAGGTAGTATAC | 59.231 | 44.000 | 29.74 | 0.00 | 42.04 | 1.47 |
797 | 813 | 4.180377 | ACCAGCTAGCAGGTAGTATACA | 57.820 | 45.455 | 28.67 | 0.00 | 45.43 | 2.29 |
798 | 814 | 4.742012 | ACCAGCTAGCAGGTAGTATACAT | 58.258 | 43.478 | 28.67 | 2.11 | 45.43 | 2.29 |
799 | 815 | 5.888901 | ACCAGCTAGCAGGTAGTATACATA | 58.111 | 41.667 | 28.67 | 0.00 | 45.43 | 2.29 |
800 | 816 | 5.711036 | ACCAGCTAGCAGGTAGTATACATAC | 59.289 | 44.000 | 28.67 | 5.02 | 45.43 | 2.39 |
801 | 817 | 5.710567 | CCAGCTAGCAGGTAGTATACATACA | 59.289 | 44.000 | 18.83 | 0.00 | 45.43 | 2.29 |
802 | 818 | 6.349445 | CCAGCTAGCAGGTAGTATACATACAC | 60.349 | 46.154 | 18.83 | 0.00 | 45.43 | 2.90 |
803 | 819 | 6.431543 | CAGCTAGCAGGTAGTATACATACACT | 59.568 | 42.308 | 18.83 | 6.46 | 45.43 | 3.55 |
804 | 820 | 6.655848 | AGCTAGCAGGTAGTATACATACACTC | 59.344 | 42.308 | 18.83 | 0.00 | 45.43 | 3.51 |
805 | 821 | 6.430308 | GCTAGCAGGTAGTATACATACACTCA | 59.570 | 42.308 | 10.63 | 0.00 | 45.43 | 3.41 |
806 | 822 | 7.121463 | GCTAGCAGGTAGTATACATACACTCAT | 59.879 | 40.741 | 10.63 | 0.00 | 45.43 | 2.90 |
807 | 823 | 7.220741 | AGCAGGTAGTATACATACACTCATG | 57.779 | 40.000 | 5.50 | 0.00 | 45.43 | 3.07 |
808 | 824 | 7.004691 | AGCAGGTAGTATACATACACTCATGA | 58.995 | 38.462 | 5.50 | 0.00 | 45.43 | 3.07 |
917 | 933 | 6.584185 | TTAATTTTAACTTGCCAGGTCTCC | 57.416 | 37.500 | 0.00 | 0.00 | 0.00 | 3.71 |
921 | 937 | 4.755266 | TTAACTTGCCAGGTCTCCTATC | 57.245 | 45.455 | 0.00 | 0.00 | 29.64 | 2.08 |
932 | 948 | 2.287909 | GGTCTCCTATCTGCACGCTAAG | 60.288 | 54.545 | 0.00 | 0.00 | 0.00 | 2.18 |
945 | 961 | 2.157668 | CACGCTAAGTTGCTTCACGATT | 59.842 | 45.455 | 9.39 | 0.00 | 0.00 | 3.34 |
1013 | 1030 | 2.974794 | TCAGCTGCATGATATGGTACCT | 59.025 | 45.455 | 14.36 | 1.08 | 0.00 | 3.08 |
1015 | 1032 | 3.501062 | CAGCTGCATGATATGGTACCTTG | 59.499 | 47.826 | 14.36 | 2.72 | 0.00 | 3.61 |
1016 | 1033 | 3.137176 | AGCTGCATGATATGGTACCTTGT | 59.863 | 43.478 | 14.36 | 4.94 | 0.00 | 3.16 |
1075 | 1092 | 5.359194 | TGTAAGCCAAGCTAGCTAGATTT | 57.641 | 39.130 | 25.15 | 14.16 | 40.49 | 2.17 |
1265 | 1283 | 8.672815 | AGTGTATAAAAGGACTTCTAGTCGTAC | 58.327 | 37.037 | 2.84 | 0.00 | 45.96 | 3.67 |
1296 | 1314 | 8.943002 | AGTTTAACGAAAATGATAAGTACCTGG | 58.057 | 33.333 | 0.00 | 0.00 | 0.00 | 4.45 |
1333 | 1351 | 5.567552 | CACATGGCAAAACAAACGATTTTT | 58.432 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
1336 | 1354 | 7.320797 | CACATGGCAAAACAAACGATTTTTATG | 59.679 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
1344 | 1362 | 9.794685 | AAAACAAACGATTTTTATGGCAATTTT | 57.205 | 22.222 | 0.00 | 0.00 | 0.00 | 1.82 |
1355 | 1373 | 2.605030 | TGGCAATTTTAGTTGATGCGC | 58.395 | 42.857 | 0.00 | 0.00 | 37.88 | 6.09 |
1361 | 1379 | 1.732941 | TTTAGTTGATGCGCGGATGT | 58.267 | 45.000 | 20.78 | 0.00 | 0.00 | 3.06 |
1370 | 1388 | 0.170116 | TGCGCGGATGTCCATTTTTC | 59.830 | 50.000 | 8.83 | 0.00 | 35.14 | 2.29 |
1381 | 1400 | 5.843673 | TGTCCATTTTTCTTACAAGCACA | 57.156 | 34.783 | 0.00 | 0.00 | 0.00 | 4.57 |
1382 | 1401 | 5.830912 | TGTCCATTTTTCTTACAAGCACAG | 58.169 | 37.500 | 0.00 | 0.00 | 0.00 | 3.66 |
1408 | 1427 | 9.208022 | GCAATTTTCCTAGCAAAAAGATAAACT | 57.792 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
1415 | 1434 | 9.436957 | TCCTAGCAAAAAGATAAACTAAGACAG | 57.563 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
1447 | 1466 | 2.008242 | TGCCCACTAAACTTGCCATT | 57.992 | 45.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1463 | 1482 | 9.995003 | AACTTGCCATTCTCAACAAATATAAAA | 57.005 | 25.926 | 0.00 | 0.00 | 0.00 | 1.52 |
1466 | 1485 | 9.941325 | TTGCCATTCTCAACAAATATAAAATGT | 57.059 | 25.926 | 0.00 | 0.00 | 0.00 | 2.71 |
1506 | 1525 | 0.320334 | CCATGTGCACGTACCTGACA | 60.320 | 55.000 | 12.10 | 0.00 | 0.00 | 3.58 |
1532 | 1551 | 7.918076 | TCAGGTACTTTATCAGATTCCAAGTT | 58.082 | 34.615 | 7.35 | 0.00 | 34.60 | 2.66 |
1615 | 1634 | 9.923143 | GCATGGTGTACAATATATACTCTAACA | 57.077 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
1680 | 1699 | 6.805016 | AGTCAATCCAACTCATAGAGATGT | 57.195 | 37.500 | 0.31 | 0.00 | 31.83 | 3.06 |
1830 | 1855 | 5.182760 | GTCACCAAGATTTCAAGAGCAAGAT | 59.817 | 40.000 | 0.00 | 0.00 | 0.00 | 2.40 |
1919 | 1944 | 7.627311 | TCCTCAAACTATTACCTACCCTTTTC | 58.373 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
1941 | 1966 | 0.251916 | CAAGGGTCTACCGGCAATGA | 59.748 | 55.000 | 0.00 | 0.00 | 46.96 | 2.57 |
2009 | 2037 | 5.063204 | TCATTTGGAGTGAAGGTAACACTG | 58.937 | 41.667 | 0.00 | 0.00 | 46.57 | 3.66 |
2258 | 2286 | 3.577389 | GGCTGTGCCCTTACTCATT | 57.423 | 52.632 | 0.00 | 0.00 | 44.06 | 2.57 |
2265 | 2293 | 5.449177 | GCTGTGCCCTTACTCATTTGTTATC | 60.449 | 44.000 | 0.00 | 0.00 | 0.00 | 1.75 |
2266 | 2294 | 5.565509 | TGTGCCCTTACTCATTTGTTATCA | 58.434 | 37.500 | 0.00 | 0.00 | 0.00 | 2.15 |
2267 | 2295 | 5.414454 | TGTGCCCTTACTCATTTGTTATCAC | 59.586 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2269 | 2297 | 6.821665 | GTGCCCTTACTCATTTGTTATCACTA | 59.178 | 38.462 | 0.00 | 0.00 | 0.00 | 2.74 |
2270 | 2298 | 7.011482 | GTGCCCTTACTCATTTGTTATCACTAG | 59.989 | 40.741 | 0.00 | 0.00 | 0.00 | 2.57 |
2271 | 2299 | 7.048512 | GCCCTTACTCATTTGTTATCACTAGT | 58.951 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
2272 | 2300 | 7.011482 | GCCCTTACTCATTTGTTATCACTAGTG | 59.989 | 40.741 | 17.17 | 17.17 | 0.00 | 2.74 |
2275 | 2303 | 6.974932 | ACTCATTTGTTATCACTAGTGCAG | 57.025 | 37.500 | 18.45 | 0.00 | 0.00 | 4.41 |
2276 | 2304 | 6.701340 | ACTCATTTGTTATCACTAGTGCAGA | 58.299 | 36.000 | 18.45 | 6.00 | 0.00 | 4.26 |
2277 | 2305 | 7.161404 | ACTCATTTGTTATCACTAGTGCAGAA | 58.839 | 34.615 | 18.45 | 8.68 | 0.00 | 3.02 |
2278 | 2306 | 7.118390 | ACTCATTTGTTATCACTAGTGCAGAAC | 59.882 | 37.037 | 18.45 | 19.03 | 0.00 | 3.01 |
2279 | 2307 | 6.371548 | TCATTTGTTATCACTAGTGCAGAACC | 59.628 | 38.462 | 18.45 | 4.37 | 0.00 | 3.62 |
2280 | 2308 | 3.845178 | TGTTATCACTAGTGCAGAACCG | 58.155 | 45.455 | 18.45 | 0.00 | 0.00 | 4.44 |
2281 | 2309 | 3.187700 | GTTATCACTAGTGCAGAACCGG | 58.812 | 50.000 | 18.45 | 0.00 | 0.00 | 5.28 |
2282 | 2310 | 0.537188 | ATCACTAGTGCAGAACCGGG | 59.463 | 55.000 | 18.45 | 0.00 | 0.00 | 5.73 |
2283 | 2311 | 1.741770 | CACTAGTGCAGAACCGGGC | 60.742 | 63.158 | 10.54 | 0.00 | 0.00 | 6.13 |
2284 | 2312 | 2.214216 | ACTAGTGCAGAACCGGGCA | 61.214 | 57.895 | 6.32 | 1.81 | 37.77 | 5.36 |
2285 | 2313 | 1.003839 | CTAGTGCAGAACCGGGCAA | 60.004 | 57.895 | 6.32 | 0.00 | 42.45 | 4.52 |
2286 | 2314 | 0.392998 | CTAGTGCAGAACCGGGCAAT | 60.393 | 55.000 | 6.32 | 7.58 | 42.45 | 3.56 |
2287 | 2315 | 0.906066 | TAGTGCAGAACCGGGCAATA | 59.094 | 50.000 | 6.32 | 6.43 | 42.45 | 1.90 |
2288 | 2316 | 0.392998 | AGTGCAGAACCGGGCAATAG | 60.393 | 55.000 | 6.32 | 0.00 | 42.45 | 1.73 |
2289 | 2317 | 1.748879 | TGCAGAACCGGGCAATAGC | 60.749 | 57.895 | 6.32 | 2.35 | 37.03 | 2.97 |
2290 | 2318 | 1.748879 | GCAGAACCGGGCAATAGCA | 60.749 | 57.895 | 6.32 | 0.00 | 44.61 | 3.49 |
2291 | 2319 | 1.993369 | GCAGAACCGGGCAATAGCAC | 61.993 | 60.000 | 6.32 | 0.00 | 44.61 | 4.40 |
2292 | 2320 | 1.077716 | AGAACCGGGCAATAGCACC | 60.078 | 57.895 | 6.32 | 0.00 | 42.77 | 5.01 |
2298 | 2326 | 1.941812 | GGGCAATAGCACCGATTCG | 59.058 | 57.895 | 0.00 | 0.00 | 44.61 | 3.34 |
2299 | 2327 | 0.814010 | GGGCAATAGCACCGATTCGT | 60.814 | 55.000 | 5.20 | 0.00 | 44.61 | 3.85 |
2300 | 2328 | 1.539496 | GGGCAATAGCACCGATTCGTA | 60.539 | 52.381 | 5.20 | 0.00 | 44.61 | 3.43 |
2301 | 2329 | 2.206750 | GGCAATAGCACCGATTCGTAA | 58.793 | 47.619 | 5.20 | 0.00 | 44.61 | 3.18 |
2302 | 2330 | 2.221055 | GGCAATAGCACCGATTCGTAAG | 59.779 | 50.000 | 5.20 | 0.00 | 44.61 | 2.34 |
2303 | 2331 | 2.221055 | GCAATAGCACCGATTCGTAAGG | 59.779 | 50.000 | 5.20 | 0.00 | 41.58 | 2.69 |
2304 | 2332 | 3.454375 | CAATAGCACCGATTCGTAAGGT | 58.546 | 45.455 | 5.20 | 2.88 | 39.12 | 3.50 |
2305 | 2333 | 2.857592 | TAGCACCGATTCGTAAGGTC | 57.142 | 50.000 | 5.20 | 0.00 | 35.85 | 3.85 |
2306 | 2334 | 0.175073 | AGCACCGATTCGTAAGGTCC | 59.825 | 55.000 | 5.20 | 0.00 | 35.85 | 4.46 |
2307 | 2335 | 0.175073 | GCACCGATTCGTAAGGTCCT | 59.825 | 55.000 | 5.20 | 0.00 | 35.85 | 3.85 |
2308 | 2336 | 1.405121 | GCACCGATTCGTAAGGTCCTT | 60.405 | 52.381 | 9.62 | 9.62 | 35.85 | 3.36 |
2309 | 2337 | 2.933928 | GCACCGATTCGTAAGGTCCTTT | 60.934 | 50.000 | 10.04 | 0.00 | 35.85 | 3.11 |
2310 | 2338 | 3.676873 | GCACCGATTCGTAAGGTCCTTTA | 60.677 | 47.826 | 10.04 | 0.00 | 35.85 | 1.85 |
2311 | 2339 | 4.110482 | CACCGATTCGTAAGGTCCTTTAG | 58.890 | 47.826 | 10.04 | 4.60 | 35.85 | 1.85 |
2312 | 2340 | 3.766051 | ACCGATTCGTAAGGTCCTTTAGT | 59.234 | 43.478 | 10.04 | 0.00 | 31.69 | 2.24 |
2313 | 2341 | 4.110482 | CCGATTCGTAAGGTCCTTTAGTG | 58.890 | 47.826 | 10.04 | 0.00 | 38.47 | 2.74 |
2314 | 2342 | 3.550678 | CGATTCGTAAGGTCCTTTAGTGC | 59.449 | 47.826 | 10.04 | 0.00 | 38.47 | 4.40 |
2315 | 2343 | 3.323751 | TTCGTAAGGTCCTTTAGTGCC | 57.676 | 47.619 | 10.04 | 0.00 | 38.47 | 5.01 |
2316 | 2344 | 1.203052 | TCGTAAGGTCCTTTAGTGCCG | 59.797 | 52.381 | 10.04 | 3.70 | 38.47 | 5.69 |
2317 | 2345 | 1.738030 | CGTAAGGTCCTTTAGTGCCGG | 60.738 | 57.143 | 10.04 | 0.00 | 0.00 | 6.13 |
2318 | 2346 | 1.277273 | GTAAGGTCCTTTAGTGCCGGT | 59.723 | 52.381 | 10.04 | 0.00 | 0.00 | 5.28 |
2319 | 2347 | 0.769247 | AAGGTCCTTTAGTGCCGGTT | 59.231 | 50.000 | 1.90 | 0.00 | 0.00 | 4.44 |
2320 | 2348 | 0.323957 | AGGTCCTTTAGTGCCGGTTC | 59.676 | 55.000 | 1.90 | 0.00 | 0.00 | 3.62 |
2321 | 2349 | 0.035739 | GGTCCTTTAGTGCCGGTTCA | 59.964 | 55.000 | 1.90 | 0.00 | 0.00 | 3.18 |
2322 | 2350 | 1.439679 | GTCCTTTAGTGCCGGTTCAG | 58.560 | 55.000 | 1.90 | 0.00 | 0.00 | 3.02 |
2323 | 2351 | 0.323629 | TCCTTTAGTGCCGGTTCAGG | 59.676 | 55.000 | 1.90 | 0.40 | 0.00 | 3.86 |
2324 | 2352 | 0.323629 | CCTTTAGTGCCGGTTCAGGA | 59.676 | 55.000 | 1.90 | 0.00 | 0.00 | 3.86 |
2325 | 2353 | 1.271163 | CCTTTAGTGCCGGTTCAGGAA | 60.271 | 52.381 | 1.90 | 0.00 | 0.00 | 3.36 |
2326 | 2354 | 1.804748 | CTTTAGTGCCGGTTCAGGAAC | 59.195 | 52.381 | 1.90 | 3.58 | 40.25 | 3.62 |
2339 | 2367 | 5.453567 | GTTCAGGAACCAGCATTAAAGTT | 57.546 | 39.130 | 0.64 | 0.00 | 35.36 | 2.66 |
2340 | 2368 | 5.842907 | GTTCAGGAACCAGCATTAAAGTTT | 58.157 | 37.500 | 0.64 | 0.00 | 35.36 | 2.66 |
2341 | 2369 | 5.705609 | TCAGGAACCAGCATTAAAGTTTC | 57.294 | 39.130 | 0.00 | 0.00 | 0.00 | 2.78 |
2342 | 2370 | 4.215399 | TCAGGAACCAGCATTAAAGTTTCG | 59.785 | 41.667 | 0.00 | 0.00 | 0.00 | 3.46 |
2343 | 2371 | 3.506067 | AGGAACCAGCATTAAAGTTTCGG | 59.494 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
2344 | 2372 | 3.242518 | GAACCAGCATTAAAGTTTCGGC | 58.757 | 45.455 | 0.00 | 0.00 | 0.00 | 5.54 |
2345 | 2373 | 2.235016 | ACCAGCATTAAAGTTTCGGCA | 58.765 | 42.857 | 0.00 | 0.00 | 0.00 | 5.69 |
2346 | 2374 | 2.030274 | ACCAGCATTAAAGTTTCGGCAC | 60.030 | 45.455 | 0.00 | 0.00 | 0.00 | 5.01 |
2347 | 2375 | 2.228822 | CCAGCATTAAAGTTTCGGCACT | 59.771 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
2348 | 2376 | 3.438781 | CCAGCATTAAAGTTTCGGCACTA | 59.561 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
2349 | 2377 | 4.083003 | CCAGCATTAAAGTTTCGGCACTAA | 60.083 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
2350 | 2378 | 5.457140 | CAGCATTAAAGTTTCGGCACTAAA | 58.543 | 37.500 | 0.00 | 0.00 | 0.00 | 1.85 |
2351 | 2379 | 5.569059 | CAGCATTAAAGTTTCGGCACTAAAG | 59.431 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
2352 | 2380 | 4.857037 | GCATTAAAGTTTCGGCACTAAAGG | 59.143 | 41.667 | 0.00 | 0.00 | 0.00 | 3.11 |
2353 | 2381 | 4.492791 | TTAAAGTTTCGGCACTAAAGGC | 57.507 | 40.909 | 0.00 | 0.00 | 0.00 | 4.35 |
2378 | 2406 | 1.278537 | CCCCCTTTAGTACCGGTTCA | 58.721 | 55.000 | 15.04 | 0.00 | 0.00 | 3.18 |
2379 | 2407 | 1.208776 | CCCCCTTTAGTACCGGTTCAG | 59.791 | 57.143 | 15.04 | 0.52 | 0.00 | 3.02 |
2380 | 2408 | 1.406477 | CCCCTTTAGTACCGGTTCAGC | 60.406 | 57.143 | 15.04 | 0.59 | 0.00 | 4.26 |
2381 | 2409 | 1.276989 | CCCTTTAGTACCGGTTCAGCA | 59.723 | 52.381 | 15.04 | 0.00 | 0.00 | 4.41 |
2382 | 2410 | 2.093128 | CCCTTTAGTACCGGTTCAGCAT | 60.093 | 50.000 | 15.04 | 0.00 | 0.00 | 3.79 |
2383 | 2411 | 2.936498 | CCTTTAGTACCGGTTCAGCATG | 59.064 | 50.000 | 15.04 | 0.00 | 37.54 | 4.06 |
2398 | 2426 | 2.262572 | GCATGAACCGGTGCTAAAAG | 57.737 | 50.000 | 15.35 | 0.00 | 38.30 | 2.27 |
2399 | 2427 | 1.135402 | GCATGAACCGGTGCTAAAAGG | 60.135 | 52.381 | 15.35 | 0.00 | 38.30 | 3.11 |
2400 | 2428 | 2.432444 | CATGAACCGGTGCTAAAAGGA | 58.568 | 47.619 | 15.35 | 0.00 | 0.00 | 3.36 |
2401 | 2429 | 2.642154 | TGAACCGGTGCTAAAAGGAA | 57.358 | 45.000 | 15.35 | 0.00 | 0.00 | 3.36 |
2402 | 2430 | 2.933573 | TGAACCGGTGCTAAAAGGAAA | 58.066 | 42.857 | 15.35 | 0.00 | 0.00 | 3.13 |
2403 | 2431 | 2.619646 | TGAACCGGTGCTAAAAGGAAAC | 59.380 | 45.455 | 15.35 | 0.00 | 0.00 | 2.78 |
2404 | 2432 | 1.612676 | ACCGGTGCTAAAAGGAAACC | 58.387 | 50.000 | 6.12 | 0.00 | 0.00 | 3.27 |
2405 | 2433 | 1.133730 | ACCGGTGCTAAAAGGAAACCA | 60.134 | 47.619 | 6.12 | 0.00 | 0.00 | 3.67 |
2406 | 2434 | 1.268625 | CCGGTGCTAAAAGGAAACCAC | 59.731 | 52.381 | 0.00 | 0.00 | 0.00 | 4.16 |
2407 | 2435 | 1.069500 | CGGTGCTAAAAGGAAACCACG | 60.069 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
2408 | 2436 | 1.951602 | GGTGCTAAAAGGAAACCACGT | 59.048 | 47.619 | 0.00 | 0.00 | 0.00 | 4.49 |
2409 | 2437 | 2.287368 | GGTGCTAAAAGGAAACCACGTG | 60.287 | 50.000 | 9.08 | 9.08 | 0.00 | 4.49 |
2410 | 2438 | 1.950909 | TGCTAAAAGGAAACCACGTGG | 59.049 | 47.619 | 32.83 | 32.83 | 42.17 | 4.94 |
2411 | 2439 | 1.335597 | GCTAAAAGGAAACCACGTGGC | 60.336 | 52.381 | 34.26 | 18.01 | 39.32 | 5.01 |
2412 | 2440 | 1.950909 | CTAAAAGGAAACCACGTGGCA | 59.049 | 47.619 | 34.26 | 7.30 | 39.32 | 4.92 |
2413 | 2441 | 0.458260 | AAAAGGAAACCACGTGGCAC | 59.542 | 50.000 | 34.26 | 23.29 | 39.32 | 5.01 |
2415 | 2443 | 2.589442 | GGAAACCACGTGGCACGA | 60.589 | 61.111 | 42.65 | 0.00 | 46.05 | 4.35 |
2416 | 2444 | 2.604174 | GGAAACCACGTGGCACGAG | 61.604 | 63.158 | 42.65 | 34.61 | 46.05 | 4.18 |
2417 | 2445 | 1.885850 | GAAACCACGTGGCACGAGT | 60.886 | 57.895 | 42.65 | 33.51 | 46.05 | 4.18 |
2418 | 2446 | 1.828331 | GAAACCACGTGGCACGAGTC | 61.828 | 60.000 | 42.65 | 25.09 | 46.05 | 3.36 |
2419 | 2447 | 2.581208 | AAACCACGTGGCACGAGTCA | 62.581 | 55.000 | 42.65 | 0.00 | 46.05 | 3.41 |
2420 | 2448 | 2.734723 | CCACGTGGCACGAGTCAG | 60.735 | 66.667 | 42.65 | 25.00 | 46.05 | 3.51 |
2421 | 2449 | 3.406361 | CACGTGGCACGAGTCAGC | 61.406 | 66.667 | 42.65 | 1.70 | 46.05 | 4.26 |
2422 | 2450 | 3.606662 | ACGTGGCACGAGTCAGCT | 61.607 | 61.111 | 42.65 | 18.80 | 46.05 | 4.24 |
2423 | 2451 | 2.807045 | CGTGGCACGAGTCAGCTC | 60.807 | 66.667 | 34.85 | 0.00 | 46.05 | 4.09 |
2424 | 2452 | 2.433318 | GTGGCACGAGTCAGCTCC | 60.433 | 66.667 | 0.00 | 0.00 | 38.49 | 4.70 |
2425 | 2453 | 4.056125 | TGGCACGAGTCAGCTCCG | 62.056 | 66.667 | 4.76 | 0.00 | 38.49 | 4.63 |
2426 | 2454 | 4.803426 | GGCACGAGTCAGCTCCGG | 62.803 | 72.222 | 0.00 | 0.00 | 38.49 | 5.14 |
2427 | 2455 | 4.803426 | GCACGAGTCAGCTCCGGG | 62.803 | 72.222 | 0.00 | 0.00 | 38.49 | 5.73 |
2428 | 2456 | 4.135153 | CACGAGTCAGCTCCGGGG | 62.135 | 72.222 | 0.00 | 0.00 | 38.49 | 5.73 |
2446 | 2474 | 3.638132 | GCCGGGAGCCCTTTAGTA | 58.362 | 61.111 | 2.18 | 0.00 | 34.35 | 1.82 |
2447 | 2475 | 1.145598 | GCCGGGAGCCCTTTAGTAC | 59.854 | 63.158 | 2.18 | 0.00 | 34.35 | 2.73 |
2448 | 2476 | 1.828081 | CCGGGAGCCCTTTAGTACC | 59.172 | 63.158 | 3.70 | 0.00 | 0.00 | 3.34 |
2449 | 2477 | 1.440476 | CGGGAGCCCTTTAGTACCG | 59.560 | 63.158 | 3.70 | 0.00 | 0.00 | 4.02 |
2450 | 2478 | 1.828081 | GGGAGCCCTTTAGTACCGG | 59.172 | 63.158 | 0.00 | 0.00 | 0.00 | 5.28 |
2451 | 2479 | 0.979709 | GGGAGCCCTTTAGTACCGGT | 60.980 | 60.000 | 13.98 | 13.98 | 0.00 | 5.28 |
2452 | 2480 | 0.907486 | GGAGCCCTTTAGTACCGGTT | 59.093 | 55.000 | 15.04 | 0.00 | 0.00 | 4.44 |
2453 | 2481 | 1.406477 | GGAGCCCTTTAGTACCGGTTG | 60.406 | 57.143 | 15.04 | 0.00 | 0.00 | 3.77 |
2454 | 2482 | 0.616891 | AGCCCTTTAGTACCGGTTGG | 59.383 | 55.000 | 15.04 | 5.94 | 42.84 | 3.77 |
2477 | 2505 | 8.203937 | TGGTAACATCAATCGGTACTAAAATG | 57.796 | 34.615 | 0.00 | 0.00 | 46.17 | 2.32 |
2478 | 2506 | 7.825270 | TGGTAACATCAATCGGTACTAAAATGT | 59.175 | 33.333 | 0.00 | 0.00 | 46.17 | 2.71 |
2479 | 2507 | 8.671028 | GGTAACATCAATCGGTACTAAAATGTT | 58.329 | 33.333 | 12.73 | 12.73 | 38.96 | 2.71 |
2481 | 2509 | 8.964420 | AACATCAATCGGTACTAAAATGTTTG | 57.036 | 30.769 | 0.00 | 0.00 | 33.58 | 2.93 |
2482 | 2510 | 7.535139 | ACATCAATCGGTACTAAAATGTTTGG | 58.465 | 34.615 | 0.00 | 0.00 | 0.00 | 3.28 |
2483 | 2511 | 6.503589 | TCAATCGGTACTAAAATGTTTGGG | 57.496 | 37.500 | 0.00 | 0.00 | 0.00 | 4.12 |
2484 | 2512 | 5.416326 | TCAATCGGTACTAAAATGTTTGGGG | 59.584 | 40.000 | 0.00 | 0.00 | 0.00 | 4.96 |
2485 | 2513 | 3.688235 | TCGGTACTAAAATGTTTGGGGG | 58.312 | 45.455 | 0.00 | 0.00 | 0.00 | 5.40 |
2486 | 2514 | 3.074242 | TCGGTACTAAAATGTTTGGGGGT | 59.926 | 43.478 | 0.00 | 0.00 | 0.00 | 4.95 |
2487 | 2515 | 3.827876 | CGGTACTAAAATGTTTGGGGGTT | 59.172 | 43.478 | 0.00 | 0.00 | 0.00 | 4.11 |
2488 | 2516 | 4.281435 | CGGTACTAAAATGTTTGGGGGTTT | 59.719 | 41.667 | 0.00 | 0.00 | 0.00 | 3.27 |
2489 | 2517 | 5.221481 | CGGTACTAAAATGTTTGGGGGTTTT | 60.221 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2490 | 2518 | 6.593807 | GGTACTAAAATGTTTGGGGGTTTTT | 58.406 | 36.000 | 0.00 | 0.00 | 0.00 | 1.94 |
2491 | 2519 | 6.483974 | GGTACTAAAATGTTTGGGGGTTTTTG | 59.516 | 38.462 | 0.00 | 0.00 | 0.00 | 2.44 |
2492 | 2520 | 5.441500 | ACTAAAATGTTTGGGGGTTTTTGG | 58.558 | 37.500 | 0.00 | 0.00 | 0.00 | 3.28 |
2493 | 2521 | 4.323569 | AAAATGTTTGGGGGTTTTTGGT | 57.676 | 36.364 | 0.00 | 0.00 | 0.00 | 3.67 |
2494 | 2522 | 4.323569 | AAATGTTTGGGGGTTTTTGGTT | 57.676 | 36.364 | 0.00 | 0.00 | 0.00 | 3.67 |
2495 | 2523 | 4.323569 | AATGTTTGGGGGTTTTTGGTTT | 57.676 | 36.364 | 0.00 | 0.00 | 0.00 | 3.27 |
2496 | 2524 | 3.808834 | TGTTTGGGGGTTTTTGGTTTT | 57.191 | 38.095 | 0.00 | 0.00 | 0.00 | 2.43 |
2497 | 2525 | 4.921644 | TGTTTGGGGGTTTTTGGTTTTA | 57.078 | 36.364 | 0.00 | 0.00 | 0.00 | 1.52 |
2498 | 2526 | 5.452341 | TGTTTGGGGGTTTTTGGTTTTAT | 57.548 | 34.783 | 0.00 | 0.00 | 0.00 | 1.40 |
2499 | 2527 | 5.193679 | TGTTTGGGGGTTTTTGGTTTTATG | 58.806 | 37.500 | 0.00 | 0.00 | 0.00 | 1.90 |
2500 | 2528 | 5.045140 | TGTTTGGGGGTTTTTGGTTTTATGA | 60.045 | 36.000 | 0.00 | 0.00 | 0.00 | 2.15 |
2501 | 2529 | 5.913946 | TTGGGGGTTTTTGGTTTTATGAT | 57.086 | 34.783 | 0.00 | 0.00 | 0.00 | 2.45 |
2502 | 2530 | 5.913946 | TGGGGGTTTTTGGTTTTATGATT | 57.086 | 34.783 | 0.00 | 0.00 | 0.00 | 2.57 |
2503 | 2531 | 6.267492 | TGGGGGTTTTTGGTTTTATGATTT | 57.733 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
2504 | 2532 | 6.673583 | TGGGGGTTTTTGGTTTTATGATTTT | 58.326 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2505 | 2533 | 7.126061 | TGGGGGTTTTTGGTTTTATGATTTTT | 58.874 | 30.769 | 0.00 | 0.00 | 0.00 | 1.94 |
2554 | 2582 | 7.835634 | TTTTAATTCTTTTTCGTTTGCTGGT | 57.164 | 28.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2555 | 2583 | 8.928270 | TTTTAATTCTTTTTCGTTTGCTGGTA | 57.072 | 26.923 | 0.00 | 0.00 | 0.00 | 3.25 |
2556 | 2584 | 9.535878 | TTTTAATTCTTTTTCGTTTGCTGGTAT | 57.464 | 25.926 | 0.00 | 0.00 | 0.00 | 2.73 |
2557 | 2585 | 9.535878 | TTTAATTCTTTTTCGTTTGCTGGTATT | 57.464 | 25.926 | 0.00 | 0.00 | 0.00 | 1.89 |
2558 | 2586 | 9.535878 | TTAATTCTTTTTCGTTTGCTGGTATTT | 57.464 | 25.926 | 0.00 | 0.00 | 0.00 | 1.40 |
2559 | 2587 | 8.432110 | AATTCTTTTTCGTTTGCTGGTATTTT | 57.568 | 26.923 | 0.00 | 0.00 | 0.00 | 1.82 |
2560 | 2588 | 9.535878 | AATTCTTTTTCGTTTGCTGGTATTTTA | 57.464 | 25.926 | 0.00 | 0.00 | 0.00 | 1.52 |
2561 | 2589 | 7.917720 | TCTTTTTCGTTTGCTGGTATTTTAC | 57.082 | 32.000 | 0.00 | 0.00 | 0.00 | 2.01 |
2562 | 2590 | 6.633634 | TCTTTTTCGTTTGCTGGTATTTTACG | 59.366 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
2563 | 2591 | 4.407496 | TTCGTTTGCTGGTATTTTACGG | 57.593 | 40.909 | 0.00 | 0.00 | 0.00 | 4.02 |
2564 | 2592 | 3.401182 | TCGTTTGCTGGTATTTTACGGT | 58.599 | 40.909 | 0.00 | 0.00 | 0.00 | 4.83 |
2565 | 2593 | 4.564041 | TCGTTTGCTGGTATTTTACGGTA | 58.436 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
2566 | 2594 | 4.388469 | TCGTTTGCTGGTATTTTACGGTAC | 59.612 | 41.667 | 0.00 | 0.00 | 0.00 | 3.34 |
2567 | 2595 | 4.389687 | CGTTTGCTGGTATTTTACGGTACT | 59.610 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
2568 | 2596 | 5.576384 | CGTTTGCTGGTATTTTACGGTACTA | 59.424 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2569 | 2597 | 6.454186 | CGTTTGCTGGTATTTTACGGTACTAC | 60.454 | 42.308 | 0.00 | 0.00 | 0.00 | 2.73 |
2570 | 2598 | 5.657826 | TGCTGGTATTTTACGGTACTACA | 57.342 | 39.130 | 0.00 | 0.00 | 0.00 | 2.74 |
2571 | 2599 | 5.410067 | TGCTGGTATTTTACGGTACTACAC | 58.590 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
2572 | 2600 | 5.047448 | TGCTGGTATTTTACGGTACTACACA | 60.047 | 40.000 | 0.00 | 0.00 | 0.00 | 3.72 |
2573 | 2601 | 6.044682 | GCTGGTATTTTACGGTACTACACAT | 58.955 | 40.000 | 0.00 | 0.00 | 0.00 | 3.21 |
2574 | 2602 | 6.536224 | GCTGGTATTTTACGGTACTACACATT | 59.464 | 38.462 | 0.00 | 0.00 | 0.00 | 2.71 |
2575 | 2603 | 7.064966 | GCTGGTATTTTACGGTACTACACATTT | 59.935 | 37.037 | 0.00 | 0.00 | 0.00 | 2.32 |
2576 | 2604 | 8.845413 | TGGTATTTTACGGTACTACACATTTT | 57.155 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
2577 | 2605 | 9.935241 | TGGTATTTTACGGTACTACACATTTTA | 57.065 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
2579 | 2607 | 9.885743 | GTATTTTACGGTACTACACATTTTACG | 57.114 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
2580 | 2608 | 6.942886 | TTTACGGTACTACACATTTTACGG | 57.057 | 37.500 | 0.00 | 0.00 | 0.00 | 4.02 |
2581 | 2609 | 4.519540 | ACGGTACTACACATTTTACGGT | 57.480 | 40.909 | 0.00 | 0.00 | 0.00 | 4.83 |
2582 | 2610 | 5.637006 | ACGGTACTACACATTTTACGGTA | 57.363 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
2583 | 2611 | 5.399013 | ACGGTACTACACATTTTACGGTAC | 58.601 | 41.667 | 0.00 | 0.00 | 0.00 | 3.34 |
2584 | 2612 | 5.048364 | ACGGTACTACACATTTTACGGTACA | 60.048 | 40.000 | 0.00 | 0.00 | 32.44 | 2.90 |
2585 | 2613 | 5.286082 | CGGTACTACACATTTTACGGTACAC | 59.714 | 44.000 | 0.00 | 0.00 | 32.44 | 2.90 |
2586 | 2614 | 6.155827 | GGTACTACACATTTTACGGTACACA | 58.844 | 40.000 | 0.00 | 0.00 | 32.44 | 3.72 |
2587 | 2615 | 6.089417 | GGTACTACACATTTTACGGTACACAC | 59.911 | 42.308 | 0.00 | 0.00 | 32.44 | 3.82 |
2588 | 2616 | 5.599732 | ACTACACATTTTACGGTACACACA | 58.400 | 37.500 | 0.00 | 0.00 | 0.00 | 3.72 |
2589 | 2617 | 4.799419 | ACACATTTTACGGTACACACAC | 57.201 | 40.909 | 0.00 | 0.00 | 0.00 | 3.82 |
3126 | 3194 | 3.577415 | GGCTATATAAGACCCTTCACGGT | 59.423 | 47.826 | 0.00 | 0.00 | 39.49 | 4.83 |
3134 | 3202 | 1.057851 | ACCCTTCACGGTCCTTGGAA | 61.058 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
3173 | 3241 | 6.238648 | GCCTAGCACGGTTATGAACATATTTT | 60.239 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
3225 | 3293 | 8.502738 | AGGGGAACATATTGTGTAGAAATACAT | 58.497 | 33.333 | 0.00 | 0.00 | 41.14 | 2.29 |
3442 | 3510 | 0.683412 | ACGTTTTCCGGTAGAAGCCT | 59.317 | 50.000 | 0.00 | 0.00 | 42.24 | 4.58 |
3457 | 3525 | 1.377202 | GCCTCCTCAATGCAACCGA | 60.377 | 57.895 | 0.00 | 0.00 | 0.00 | 4.69 |
3581 | 3649 | 4.275810 | ACGGTACCTTAATACTGAGCAGA | 58.724 | 43.478 | 10.90 | 0.00 | 35.36 | 4.26 |
3658 | 3726 | 3.119065 | TGATGTATGCCGTCTTTTCCGTA | 60.119 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
3685 | 3753 | 3.322466 | CTGGTCCTCCCGTGCCTT | 61.322 | 66.667 | 0.00 | 0.00 | 35.15 | 4.35 |
3805 | 3873 | 2.158755 | CGAGGTCTTTCCAATAGGGCAT | 60.159 | 50.000 | 0.00 | 0.00 | 39.02 | 4.40 |
4277 | 4352 | 5.904984 | ATGGCCTTAGGTACACATCAATA | 57.095 | 39.130 | 3.32 | 0.00 | 0.00 | 1.90 |
4636 | 4712 | 7.568128 | TGGTATTATAGGAGCATACCACATT | 57.432 | 36.000 | 8.55 | 0.00 | 44.96 | 2.71 |
4666 | 4742 | 0.253327 | GAATCTTCTTCCTGGGGCGT | 59.747 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
5076 | 5152 | 1.135575 | GCAGTTTCTCTTTGCATCGGG | 60.136 | 52.381 | 0.00 | 0.00 | 37.75 | 5.14 |
5101 | 5177 | 2.435805 | GGCCTGACCTAGATCATCAACA | 59.564 | 50.000 | 0.00 | 0.00 | 34.51 | 3.33 |
5645 | 5724 | 3.868888 | GATCAAGATCGCAACTAAGGC | 57.131 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
5890 | 5969 | 1.609555 | CGGTTGGAATTTCCGGTTCAA | 59.390 | 47.619 | 10.79 | 0.00 | 40.17 | 2.69 |
5891 | 5970 | 2.606065 | CGGTTGGAATTTCCGGTTCAAC | 60.606 | 50.000 | 10.79 | 3.05 | 40.17 | 3.18 |
5901 | 5980 | 2.450476 | TCCGGTTCAACTACCTCCTAC | 58.550 | 52.381 | 0.00 | 0.00 | 35.97 | 3.18 |
5903 | 5982 | 2.764572 | CCGGTTCAACTACCTCCTACAT | 59.235 | 50.000 | 0.00 | 0.00 | 35.97 | 2.29 |
5905 | 5984 | 4.202090 | CCGGTTCAACTACCTCCTACATAC | 60.202 | 50.000 | 0.00 | 0.00 | 35.97 | 2.39 |
5910 | 5989 | 8.480501 | GGTTCAACTACCTCCTACATACAAATA | 58.519 | 37.037 | 0.00 | 0.00 | 35.23 | 1.40 |
5929 | 6008 | 7.934457 | ACAAATATCTATGTCAACTTGATGGC | 58.066 | 34.615 | 0.00 | 0.00 | 0.00 | 4.40 |
6388 | 6476 | 5.287674 | TCTAGCAATGAGAGATGAAAGGG | 57.712 | 43.478 | 0.00 | 0.00 | 0.00 | 3.95 |
6600 | 6688 | 2.303890 | CAAGAACCGGTACTAAAGGGGT | 59.696 | 50.000 | 8.00 | 0.00 | 0.00 | 4.95 |
6755 | 6844 | 3.830744 | TGTATACATTAGTGCCGGCTT | 57.169 | 42.857 | 29.70 | 18.41 | 0.00 | 4.35 |
6811 | 6900 | 9.281371 | GTTTGACCCTTTTTCTACTAGTGTATT | 57.719 | 33.333 | 5.39 | 0.00 | 0.00 | 1.89 |
6812 | 6901 | 9.856162 | TTTGACCCTTTTTCTACTAGTGTATTT | 57.144 | 29.630 | 5.39 | 0.00 | 0.00 | 1.40 |
6813 | 6902 | 9.856162 | TTGACCCTTTTTCTACTAGTGTATTTT | 57.144 | 29.630 | 5.39 | 0.00 | 0.00 | 1.82 |
6814 | 6903 | 9.856162 | TGACCCTTTTTCTACTAGTGTATTTTT | 57.144 | 29.630 | 5.39 | 0.00 | 0.00 | 1.94 |
6816 | 6905 | 8.573885 | ACCCTTTTTCTACTAGTGTATTTTTGC | 58.426 | 33.333 | 5.39 | 0.00 | 0.00 | 3.68 |
6817 | 6906 | 8.027189 | CCCTTTTTCTACTAGTGTATTTTTGCC | 58.973 | 37.037 | 5.39 | 0.00 | 0.00 | 4.52 |
6818 | 6907 | 8.027189 | CCTTTTTCTACTAGTGTATTTTTGCCC | 58.973 | 37.037 | 5.39 | 0.00 | 0.00 | 5.36 |
6819 | 6908 | 7.457024 | TTTTCTACTAGTGTATTTTTGCCCC | 57.543 | 36.000 | 5.39 | 0.00 | 0.00 | 5.80 |
6850 | 6939 | 2.478134 | CTCTAGCTCGGTTTATGCATGC | 59.522 | 50.000 | 11.82 | 11.82 | 0.00 | 4.06 |
6983 | 7080 | 4.222810 | GGTTACTTTGCAAAATGGGGAGAT | 59.777 | 41.667 | 13.84 | 0.00 | 0.00 | 2.75 |
7097 | 7194 | 5.952526 | TGTTCGATGAAGTCTACACACTA | 57.047 | 39.130 | 0.00 | 0.00 | 0.00 | 2.74 |
7127 | 7224 | 4.978099 | AGATTGAAGACAATGGTGTGACT | 58.022 | 39.130 | 0.00 | 0.00 | 45.30 | 3.41 |
7158 | 7255 | 4.446889 | GCTTCTTGTTCCCATATCTCCCAT | 60.447 | 45.833 | 0.00 | 0.00 | 0.00 | 4.00 |
7224 | 7321 | 4.452114 | CACAAATCCTTTCTGATGTCGTCA | 59.548 | 41.667 | 0.00 | 0.00 | 35.05 | 4.35 |
7571 | 7668 | 2.046023 | CCAATGCTGGTCCGCAGA | 60.046 | 61.111 | 12.72 | 0.00 | 44.10 | 4.26 |
7581 | 7678 | 0.175760 | GGTCCGCAGAGCACATAAGA | 59.824 | 55.000 | 0.00 | 0.00 | 40.37 | 2.10 |
7649 | 7746 | 0.249398 | ACCACATCGTAGCAACTCCC | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
7733 | 7830 | 0.768622 | TTGGCCCCGAAAGAAGAGAA | 59.231 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
7977 | 8078 | 6.371548 | TGTGCAGTCACTTAATTAGTTGATCC | 59.628 | 38.462 | 0.00 | 0.00 | 43.49 | 3.36 |
8076 | 8177 | 0.886490 | CGGACTTGGCTTTGAGTGCT | 60.886 | 55.000 | 0.00 | 0.00 | 32.76 | 4.40 |
8291 | 8392 | 4.576463 | CACTATTCACTACTGAAATGGCCC | 59.424 | 45.833 | 0.00 | 0.00 | 39.90 | 5.80 |
8329 | 8430 | 0.534203 | GTTGGACACTCGGCAAAGGA | 60.534 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
8330 | 8431 | 0.400213 | TTGGACACTCGGCAAAGGAT | 59.600 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
8343 | 8444 | 3.561725 | GGCAAAGGATCTCATAAACCGAG | 59.438 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
8436 | 8537 | 1.503542 | GCACTCGGCAAAGACATGG | 59.496 | 57.895 | 0.00 | 0.00 | 43.97 | 3.66 |
8437 | 8538 | 0.955428 | GCACTCGGCAAAGACATGGA | 60.955 | 55.000 | 0.00 | 0.00 | 43.97 | 3.41 |
8438 | 8539 | 0.798776 | CACTCGGCAAAGACATGGAC | 59.201 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
8439 | 8540 | 0.687354 | ACTCGGCAAAGACATGGACT | 59.313 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
8440 | 8541 | 1.338200 | ACTCGGCAAAGACATGGACTC | 60.338 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
8441 | 8542 | 0.976641 | TCGGCAAAGACATGGACTCT | 59.023 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
8442 | 8543 | 1.066858 | TCGGCAAAGACATGGACTCTC | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 3.20 |
8443 | 8544 | 1.363744 | GGCAAAGACATGGACTCTCG | 58.636 | 55.000 | 0.00 | 0.00 | 0.00 | 4.04 |
8444 | 8545 | 1.363744 | GCAAAGACATGGACTCTCGG | 58.636 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
8445 | 8546 | 1.363744 | CAAAGACATGGACTCTCGGC | 58.636 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
8446 | 8547 | 0.976641 | AAAGACATGGACTCTCGGCA | 59.023 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 |
8447 | 8548 | 0.976641 | AAGACATGGACTCTCGGCAA | 59.023 | 50.000 | 0.00 | 0.00 | 0.00 | 4.52 |
8448 | 8549 | 0.976641 | AGACATGGACTCTCGGCAAA | 59.023 | 50.000 | 0.00 | 0.00 | 0.00 | 3.68 |
8449 | 8550 | 1.066573 | AGACATGGACTCTCGGCAAAG | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 2.77 |
8450 | 8551 | 0.036010 | ACATGGACTCTCGGCAAAGG | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 3.11 |
8451 | 8552 | 1.078143 | ATGGACTCTCGGCAAAGGC | 60.078 | 57.895 | 0.00 | 0.00 | 40.13 | 4.35 |
8545 | 8646 | 5.089970 | AGCATAATCTGTAGAAGTGTGCA | 57.910 | 39.130 | 15.12 | 0.00 | 34.79 | 4.57 |
8546 | 8647 | 5.678583 | AGCATAATCTGTAGAAGTGTGCAT | 58.321 | 37.500 | 15.12 | 3.86 | 34.79 | 3.96 |
8586 | 8687 | 2.269241 | CACGGCCTCTTTCTCCCC | 59.731 | 66.667 | 0.00 | 0.00 | 0.00 | 4.81 |
8587 | 8688 | 3.391382 | ACGGCCTCTTTCTCCCCG | 61.391 | 66.667 | 0.00 | 0.00 | 44.19 | 5.73 |
8588 | 8689 | 3.075005 | CGGCCTCTTTCTCCCCGA | 61.075 | 66.667 | 0.00 | 0.00 | 41.34 | 5.14 |
8590 | 8691 | 1.915983 | GGCCTCTTTCTCCCCGATT | 59.084 | 57.895 | 0.00 | 0.00 | 0.00 | 3.34 |
8591 | 8692 | 1.129058 | GGCCTCTTTCTCCCCGATTA | 58.871 | 55.000 | 0.00 | 0.00 | 0.00 | 1.75 |
8594 | 8695 | 3.142174 | GCCTCTTTCTCCCCGATTATTG | 58.858 | 50.000 | 0.00 | 0.00 | 0.00 | 1.90 |
8596 | 8697 | 4.130118 | CCTCTTTCTCCCCGATTATTGTG | 58.870 | 47.826 | 0.00 | 0.00 | 0.00 | 3.33 |
8597 | 8698 | 4.384208 | CCTCTTTCTCCCCGATTATTGTGT | 60.384 | 45.833 | 0.00 | 0.00 | 0.00 | 3.72 |
8598 | 8699 | 5.174037 | TCTTTCTCCCCGATTATTGTGTT | 57.826 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
8599 | 8700 | 5.566469 | TCTTTCTCCCCGATTATTGTGTTT | 58.434 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
8601 | 8702 | 5.637006 | TTCTCCCCGATTATTGTGTTTTG | 57.363 | 39.130 | 0.00 | 0.00 | 0.00 | 2.44 |
8602 | 8703 | 3.442273 | TCTCCCCGATTATTGTGTTTTGC | 59.558 | 43.478 | 0.00 | 0.00 | 0.00 | 3.68 |
8603 | 8704 | 2.162608 | TCCCCGATTATTGTGTTTTGCG | 59.837 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
8604 | 8705 | 2.162608 | CCCCGATTATTGTGTTTTGCGA | 59.837 | 45.455 | 0.00 | 0.00 | 0.00 | 5.10 |
8605 | 8706 | 3.366476 | CCCCGATTATTGTGTTTTGCGAA | 60.366 | 43.478 | 0.00 | 0.00 | 0.00 | 4.70 |
8607 | 8708 | 4.862018 | CCCGATTATTGTGTTTTGCGAATT | 59.138 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
8608 | 8709 | 5.347364 | CCCGATTATTGTGTTTTGCGAATTT | 59.653 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
8611 | 8712 | 7.890717 | CCGATTATTGTGTTTTGCGAATTTTAC | 59.109 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
8612 | 8713 | 7.621567 | CGATTATTGTGTTTTGCGAATTTTACG | 59.378 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
8613 | 8714 | 7.909777 | TTATTGTGTTTTGCGAATTTTACGA | 57.090 | 28.000 | 0.00 | 0.00 | 0.00 | 3.43 |
8615 | 8716 | 5.607858 | TGTGTTTTGCGAATTTTACGAAC | 57.392 | 34.783 | 0.00 | 0.00 | 0.00 | 3.95 |
8616 | 8717 | 4.499758 | TGTGTTTTGCGAATTTTACGAACC | 59.500 | 37.500 | 0.00 | 0.00 | 0.00 | 3.62 |
8617 | 8718 | 4.499758 | GTGTTTTGCGAATTTTACGAACCA | 59.500 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
8618 | 8719 | 5.004535 | GTGTTTTGCGAATTTTACGAACCAA | 59.995 | 36.000 | 0.00 | 0.00 | 0.00 | 3.67 |
8619 | 8720 | 5.575606 | TGTTTTGCGAATTTTACGAACCAAA | 59.424 | 32.000 | 0.00 | 0.00 | 0.00 | 3.28 |
8620 | 8721 | 5.874892 | TTTGCGAATTTTACGAACCAAAG | 57.125 | 34.783 | 0.00 | 0.00 | 0.00 | 2.77 |
8621 | 8722 | 4.815040 | TGCGAATTTTACGAACCAAAGA | 57.185 | 36.364 | 0.00 | 0.00 | 0.00 | 2.52 |
8622 | 8723 | 4.778904 | TGCGAATTTTACGAACCAAAGAG | 58.221 | 39.130 | 0.00 | 0.00 | 0.00 | 2.85 |
8623 | 8724 | 4.156182 | GCGAATTTTACGAACCAAAGAGG | 58.844 | 43.478 | 0.00 | 0.00 | 45.67 | 3.69 |
8624 | 8725 | 4.156182 | CGAATTTTACGAACCAAAGAGGC | 58.844 | 43.478 | 0.00 | 0.00 | 43.14 | 4.70 |
8625 | 8726 | 4.482386 | GAATTTTACGAACCAAAGAGGCC | 58.518 | 43.478 | 0.00 | 0.00 | 43.14 | 5.19 |
8626 | 8727 | 1.900245 | TTTACGAACCAAAGAGGCCC | 58.100 | 50.000 | 0.00 | 0.00 | 43.14 | 5.80 |
8628 | 8729 | 1.941377 | TACGAACCAAAGAGGCCCTA | 58.059 | 50.000 | 0.00 | 0.00 | 43.14 | 3.53 |
8629 | 8730 | 1.286248 | ACGAACCAAAGAGGCCCTAT | 58.714 | 50.000 | 0.00 | 0.00 | 43.14 | 2.57 |
8630 | 8731 | 1.065418 | ACGAACCAAAGAGGCCCTATG | 60.065 | 52.381 | 0.00 | 0.00 | 43.14 | 2.23 |
8631 | 8732 | 1.393603 | GAACCAAAGAGGCCCTATGC | 58.606 | 55.000 | 0.00 | 0.00 | 43.14 | 3.14 |
8633 | 8734 | 0.929244 | ACCAAAGAGGCCCTATGCAT | 59.071 | 50.000 | 3.79 | 3.79 | 43.89 | 3.96 |
8634 | 8735 | 1.325355 | CCAAAGAGGCCCTATGCATG | 58.675 | 55.000 | 10.16 | 0.00 | 43.89 | 4.06 |
8635 | 8736 | 0.672342 | CAAAGAGGCCCTATGCATGC | 59.328 | 55.000 | 11.82 | 11.82 | 43.89 | 4.06 |
8636 | 8737 | 0.468771 | AAAGAGGCCCTATGCATGCC | 60.469 | 55.000 | 16.68 | 16.76 | 45.70 | 4.40 |
8637 | 8738 | 2.282745 | GAGGCCCTATGCATGCCC | 60.283 | 66.667 | 19.91 | 7.83 | 46.55 | 5.36 |
8639 | 8740 | 2.123338 | GGCCCTATGCATGCCCAA | 60.123 | 61.111 | 16.68 | 0.00 | 43.89 | 4.12 |
8640 | 8741 | 1.534717 | GGCCCTATGCATGCCCAAT | 60.535 | 57.895 | 16.68 | 4.59 | 43.89 | 3.16 |
8641 | 8742 | 1.123246 | GGCCCTATGCATGCCCAATT | 61.123 | 55.000 | 16.68 | 0.00 | 43.89 | 2.32 |
8642 | 8743 | 1.631405 | GCCCTATGCATGCCCAATTA | 58.369 | 50.000 | 16.68 | 0.00 | 40.77 | 1.40 |
8643 | 8744 | 2.181975 | GCCCTATGCATGCCCAATTAT | 58.818 | 47.619 | 16.68 | 2.96 | 40.77 | 1.28 |
8645 | 8746 | 3.768757 | GCCCTATGCATGCCCAATTATTA | 59.231 | 43.478 | 16.68 | 0.00 | 40.77 | 0.98 |
8686 | 8826 | 5.079406 | CGCTGATTATTTACACACACACAC | 58.921 | 41.667 | 0.00 | 0.00 | 0.00 | 3.82 |
8687 | 8827 | 5.333721 | CGCTGATTATTTACACACACACACA | 60.334 | 40.000 | 0.00 | 0.00 | 0.00 | 3.72 |
8688 | 8828 | 5.851177 | GCTGATTATTTACACACACACACAC | 59.149 | 40.000 | 0.00 | 0.00 | 0.00 | 3.82 |
8689 | 8829 | 6.512578 | GCTGATTATTTACACACACACACACA | 60.513 | 38.462 | 0.00 | 0.00 | 0.00 | 3.72 |
8690 | 8830 | 6.720343 | TGATTATTTACACACACACACACAC | 58.280 | 36.000 | 0.00 | 0.00 | 0.00 | 3.82 |
8718 | 8858 | 5.523588 | AGAGAGAGAGAGAGAGAGAGAGAA | 58.476 | 45.833 | 0.00 | 0.00 | 0.00 | 2.87 |
8719 | 8859 | 5.362430 | AGAGAGAGAGAGAGAGAGAGAGAAC | 59.638 | 48.000 | 0.00 | 0.00 | 0.00 | 3.01 |
8720 | 8860 | 5.026121 | AGAGAGAGAGAGAGAGAGAGAACA | 58.974 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
8721 | 8861 | 5.485353 | AGAGAGAGAGAGAGAGAGAGAACAA | 59.515 | 44.000 | 0.00 | 0.00 | 0.00 | 2.83 |
8722 | 8862 | 5.491982 | AGAGAGAGAGAGAGAGAGAACAAC | 58.508 | 45.833 | 0.00 | 0.00 | 0.00 | 3.32 |
8723 | 8863 | 5.013079 | AGAGAGAGAGAGAGAGAGAACAACA | 59.987 | 44.000 | 0.00 | 0.00 | 0.00 | 3.33 |
8724 | 8864 | 5.630121 | AGAGAGAGAGAGAGAGAACAACAA | 58.370 | 41.667 | 0.00 | 0.00 | 0.00 | 2.83 |
8725 | 8865 | 5.473504 | AGAGAGAGAGAGAGAGAACAACAAC | 59.526 | 44.000 | 0.00 | 0.00 | 0.00 | 3.32 |
8726 | 8866 | 5.136828 | AGAGAGAGAGAGAGAACAACAACA | 58.863 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
8727 | 8867 | 5.596361 | AGAGAGAGAGAGAGAACAACAACAA | 59.404 | 40.000 | 0.00 | 0.00 | 0.00 | 2.83 |
8728 | 8868 | 5.596845 | AGAGAGAGAGAGAACAACAACAAC | 58.403 | 41.667 | 0.00 | 0.00 | 0.00 | 3.32 |
8729 | 8869 | 5.127845 | AGAGAGAGAGAGAACAACAACAACA | 59.872 | 40.000 | 0.00 | 0.00 | 0.00 | 3.33 |
8730 | 8870 | 5.734720 | AGAGAGAGAGAACAACAACAACAA | 58.265 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
8731 | 8871 | 5.582665 | AGAGAGAGAGAACAACAACAACAAC | 59.417 | 40.000 | 0.00 | 0.00 | 0.00 | 3.32 |
8732 | 8872 | 5.245531 | AGAGAGAGAACAACAACAACAACA | 58.754 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
8733 | 8873 | 5.705441 | AGAGAGAGAACAACAACAACAACAA | 59.295 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
8734 | 8874 | 5.699839 | AGAGAGAACAACAACAACAACAAC | 58.300 | 37.500 | 0.00 | 0.00 | 0.00 | 3.32 |
8735 | 8875 | 5.240623 | AGAGAGAACAACAACAACAACAACA | 59.759 | 36.000 | 0.00 | 0.00 | 0.00 | 3.33 |
8736 | 8876 | 5.837437 | AGAGAACAACAACAACAACAACAA | 58.163 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
8737 | 8877 | 5.689961 | AGAGAACAACAACAACAACAACAAC | 59.310 | 36.000 | 0.00 | 0.00 | 0.00 | 3.32 |
8738 | 8878 | 5.352284 | AGAACAACAACAACAACAACAACA | 58.648 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
8739 | 8879 | 5.812642 | AGAACAACAACAACAACAACAACAA | 59.187 | 32.000 | 0.00 | 0.00 | 0.00 | 2.83 |
8740 | 8880 | 6.313905 | AGAACAACAACAACAACAACAACAAA | 59.686 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
8741 | 8881 | 6.042144 | ACAACAACAACAACAACAACAAAG | 57.958 | 33.333 | 0.00 | 0.00 | 0.00 | 2.77 |
8742 | 8882 | 4.723879 | ACAACAACAACAACAACAAAGC | 57.276 | 36.364 | 0.00 | 0.00 | 0.00 | 3.51 |
8743 | 8883 | 3.496507 | ACAACAACAACAACAACAAAGCC | 59.503 | 39.130 | 0.00 | 0.00 | 0.00 | 4.35 |
8744 | 8884 | 3.676291 | ACAACAACAACAACAAAGCCT | 57.324 | 38.095 | 0.00 | 0.00 | 0.00 | 4.58 |
8745 | 8885 | 4.001618 | ACAACAACAACAACAAAGCCTT | 57.998 | 36.364 | 0.00 | 0.00 | 0.00 | 4.35 |
8746 | 8886 | 4.384940 | ACAACAACAACAACAAAGCCTTT | 58.615 | 34.783 | 0.00 | 0.00 | 0.00 | 3.11 |
8747 | 8887 | 5.542779 | ACAACAACAACAACAAAGCCTTTA | 58.457 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
8748 | 8888 | 5.637387 | ACAACAACAACAACAAAGCCTTTAG | 59.363 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
8749 | 8889 | 5.400066 | ACAACAACAACAAAGCCTTTAGT | 57.600 | 34.783 | 0.00 | 0.00 | 0.00 | 2.24 |
8750 | 8890 | 5.407502 | ACAACAACAACAAAGCCTTTAGTC | 58.592 | 37.500 | 0.00 | 0.00 | 0.00 | 2.59 |
8751 | 8891 | 4.649088 | ACAACAACAAAGCCTTTAGTCC | 57.351 | 40.909 | 0.00 | 0.00 | 0.00 | 3.85 |
8752 | 8892 | 3.383505 | ACAACAACAAAGCCTTTAGTCCC | 59.616 | 43.478 | 0.00 | 0.00 | 0.00 | 4.46 |
8753 | 8893 | 3.306472 | ACAACAAAGCCTTTAGTCCCA | 57.694 | 42.857 | 0.00 | 0.00 | 0.00 | 4.37 |
8754 | 8894 | 3.637769 | ACAACAAAGCCTTTAGTCCCAA | 58.362 | 40.909 | 0.00 | 0.00 | 0.00 | 4.12 |
8755 | 8895 | 4.027437 | ACAACAAAGCCTTTAGTCCCAAA | 58.973 | 39.130 | 0.00 | 0.00 | 0.00 | 3.28 |
8756 | 8896 | 4.142026 | ACAACAAAGCCTTTAGTCCCAAAC | 60.142 | 41.667 | 0.00 | 0.00 | 0.00 | 2.93 |
8757 | 8897 | 3.637769 | ACAAAGCCTTTAGTCCCAAACA | 58.362 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
8758 | 8898 | 4.027437 | ACAAAGCCTTTAGTCCCAAACAA | 58.973 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
8759 | 8899 | 4.099419 | ACAAAGCCTTTAGTCCCAAACAAG | 59.901 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
8760 | 8900 | 3.595190 | AGCCTTTAGTCCCAAACAAGT | 57.405 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
8761 | 8901 | 3.910989 | AGCCTTTAGTCCCAAACAAGTT | 58.089 | 40.909 | 0.00 | 0.00 | 0.00 | 2.66 |
8762 | 8902 | 3.636764 | AGCCTTTAGTCCCAAACAAGTTG | 59.363 | 43.478 | 0.00 | 0.00 | 36.94 | 3.16 |
8771 | 8911 | 1.995376 | CAAACAAGTTGGGGTAGGCT | 58.005 | 50.000 | 7.96 | 0.00 | 33.18 | 4.58 |
8772 | 8912 | 3.149005 | CAAACAAGTTGGGGTAGGCTA | 57.851 | 47.619 | 7.96 | 0.00 | 33.18 | 3.93 |
8824 | 8964 | 9.820229 | TTGCTAGTTAAATTCATAGTCAAAACG | 57.180 | 29.630 | 0.00 | 0.00 | 0.00 | 3.60 |
8825 | 8965 | 8.995220 | TGCTAGTTAAATTCATAGTCAAAACGT | 58.005 | 29.630 | 0.00 | 0.00 | 0.00 | 3.99 |
8826 | 8966 | 9.262472 | GCTAGTTAAATTCATAGTCAAAACGTG | 57.738 | 33.333 | 0.00 | 0.00 | 0.00 | 4.49 |
8827 | 8967 | 9.755064 | CTAGTTAAATTCATAGTCAAAACGTGG | 57.245 | 33.333 | 0.00 | 0.00 | 0.00 | 4.94 |
8828 | 8968 | 7.081976 | AGTTAAATTCATAGTCAAAACGTGGC | 58.918 | 34.615 | 0.00 | 0.00 | 0.00 | 5.01 |
8829 | 8969 | 4.434713 | AATTCATAGTCAAAACGTGGCC | 57.565 | 40.909 | 0.00 | 0.00 | 29.16 | 5.36 |
8830 | 8970 | 2.851263 | TCATAGTCAAAACGTGGCCT | 57.149 | 45.000 | 3.32 | 0.00 | 29.16 | 5.19 |
8831 | 8971 | 3.965379 | TCATAGTCAAAACGTGGCCTA | 57.035 | 42.857 | 3.32 | 0.00 | 29.16 | 3.93 |
8832 | 8972 | 4.274602 | TCATAGTCAAAACGTGGCCTAA | 57.725 | 40.909 | 3.32 | 0.00 | 29.16 | 2.69 |
8833 | 8973 | 4.250464 | TCATAGTCAAAACGTGGCCTAAG | 58.750 | 43.478 | 3.32 | 0.00 | 29.16 | 2.18 |
8834 | 8974 | 2.922740 | AGTCAAAACGTGGCCTAAGA | 57.077 | 45.000 | 3.32 | 0.00 | 29.16 | 2.10 |
8844 | 8984 | 2.936498 | CGTGGCCTAAGATACAAACCAG | 59.064 | 50.000 | 3.32 | 0.00 | 0.00 | 4.00 |
8865 | 9005 | 5.044558 | CAGAAGCGAGGGAGTAGTATTTTC | 58.955 | 45.833 | 0.00 | 0.00 | 0.00 | 2.29 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 5.850557 | TTTCTTTTGAGTGAAGATTGGCA | 57.149 | 34.783 | 0.00 | 0.00 | 33.48 | 4.92 |
32 | 33 | 1.068333 | ACTGCATGTTCGATTGGCAAC | 60.068 | 47.619 | 0.00 | 0.00 | 33.58 | 4.17 |
33 | 34 | 1.068402 | CACTGCATGTTCGATTGGCAA | 60.068 | 47.619 | 0.68 | 0.68 | 33.58 | 4.52 |
34 | 35 | 0.522626 | CACTGCATGTTCGATTGGCA | 59.477 | 50.000 | 0.00 | 0.00 | 0.00 | 4.92 |
35 | 36 | 0.523072 | ACACTGCATGTTCGATTGGC | 59.477 | 50.000 | 0.00 | 0.00 | 38.98 | 4.52 |
44 | 45 | 2.586425 | ACTAGCCAAAACACTGCATGT | 58.414 | 42.857 | 0.00 | 0.00 | 46.42 | 3.21 |
45 | 46 | 3.648339 | AACTAGCCAAAACACTGCATG | 57.352 | 42.857 | 0.00 | 0.00 | 0.00 | 4.06 |
46 | 47 | 4.670896 | AAAACTAGCCAAAACACTGCAT | 57.329 | 36.364 | 0.00 | 0.00 | 0.00 | 3.96 |
47 | 48 | 4.499019 | GCTAAAACTAGCCAAAACACTGCA | 60.499 | 41.667 | 0.00 | 0.00 | 37.11 | 4.41 |
48 | 49 | 3.981416 | GCTAAAACTAGCCAAAACACTGC | 59.019 | 43.478 | 0.00 | 0.00 | 37.11 | 4.40 |
49 | 50 | 5.181690 | TGCTAAAACTAGCCAAAACACTG | 57.818 | 39.130 | 1.88 | 0.00 | 42.17 | 3.66 |
50 | 51 | 6.715264 | ACTATGCTAAAACTAGCCAAAACACT | 59.285 | 34.615 | 1.88 | 0.00 | 42.17 | 3.55 |
51 | 52 | 6.909909 | ACTATGCTAAAACTAGCCAAAACAC | 58.090 | 36.000 | 1.88 | 0.00 | 42.17 | 3.32 |
52 | 53 | 8.508875 | GTTACTATGCTAAAACTAGCCAAAACA | 58.491 | 33.333 | 1.88 | 0.00 | 42.17 | 2.83 |
126 | 127 | 7.344441 | GTCACAAATTTTGAACATGGTTAAGC | 58.656 | 34.615 | 15.81 | 0.00 | 0.00 | 3.09 |
175 | 176 | 7.817962 | GGACTACACAACACTAGATAAACATGT | 59.182 | 37.037 | 0.00 | 0.00 | 0.00 | 3.21 |
316 | 317 | 6.750148 | AGTGCCTAACTATTATGTAGCTCAC | 58.250 | 40.000 | 0.00 | 0.00 | 37.36 | 3.51 |
331 | 332 | 5.122396 | CACTGAAAGGTATCAAGTGCCTAAC | 59.878 | 44.000 | 0.00 | 0.00 | 42.78 | 2.34 |
342 | 343 | 7.051000 | AGGAGAAAATAGCACTGAAAGGTATC | 58.949 | 38.462 | 0.00 | 0.00 | 39.30 | 2.24 |
370 | 371 | 6.934083 | TCTGCAACTTAATTGTATGACAGTGA | 59.066 | 34.615 | 0.00 | 0.00 | 40.77 | 3.41 |
480 | 481 | 1.668751 | TGCACGTGTTTCTTCCTGTTC | 59.331 | 47.619 | 18.38 | 0.00 | 0.00 | 3.18 |
617 | 629 | 6.546428 | ACCAAGCTATGTATGACTAACTGT | 57.454 | 37.500 | 0.00 | 0.00 | 0.00 | 3.55 |
642 | 654 | 2.136298 | TAGAGAGAGTGAGTGCAGGG | 57.864 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
646 | 658 | 8.612619 | GCTAGAATATATAGAGAGAGTGAGTGC | 58.387 | 40.741 | 0.00 | 0.00 | 0.00 | 4.40 |
647 | 659 | 9.890629 | AGCTAGAATATATAGAGAGAGTGAGTG | 57.109 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
756 | 772 | 9.755122 | AGCTGGTTAGTGTCTCACATATATATA | 57.245 | 33.333 | 0.00 | 0.00 | 36.74 | 0.86 |
757 | 773 | 8.657387 | AGCTGGTTAGTGTCTCACATATATAT | 57.343 | 34.615 | 2.80 | 0.00 | 36.74 | 0.86 |
758 | 774 | 9.232473 | CTAGCTGGTTAGTGTCTCACATATATA | 57.768 | 37.037 | 0.00 | 0.00 | 36.74 | 0.86 |
759 | 775 | 6.985653 | AGCTGGTTAGTGTCTCACATATAT | 57.014 | 37.500 | 2.80 | 0.00 | 36.74 | 0.86 |
760 | 776 | 6.016192 | GCTAGCTGGTTAGTGTCTCACATATA | 60.016 | 42.308 | 7.70 | 0.00 | 36.74 | 0.86 |
761 | 777 | 5.221342 | GCTAGCTGGTTAGTGTCTCACATAT | 60.221 | 44.000 | 7.70 | 0.00 | 36.74 | 1.78 |
762 | 778 | 4.098044 | GCTAGCTGGTTAGTGTCTCACATA | 59.902 | 45.833 | 7.70 | 0.00 | 36.74 | 2.29 |
763 | 779 | 3.118956 | GCTAGCTGGTTAGTGTCTCACAT | 60.119 | 47.826 | 7.70 | 0.00 | 36.74 | 3.21 |
764 | 780 | 2.231478 | GCTAGCTGGTTAGTGTCTCACA | 59.769 | 50.000 | 7.70 | 0.00 | 36.74 | 3.58 |
765 | 781 | 2.231478 | TGCTAGCTGGTTAGTGTCTCAC | 59.769 | 50.000 | 17.23 | 0.00 | 34.10 | 3.51 |
766 | 782 | 2.493675 | CTGCTAGCTGGTTAGTGTCTCA | 59.506 | 50.000 | 17.23 | 0.00 | 0.00 | 3.27 |
767 | 783 | 2.159170 | CCTGCTAGCTGGTTAGTGTCTC | 60.159 | 54.545 | 27.73 | 0.00 | 0.00 | 3.36 |
768 | 784 | 1.827969 | CCTGCTAGCTGGTTAGTGTCT | 59.172 | 52.381 | 27.73 | 0.00 | 0.00 | 3.41 |
769 | 785 | 1.550976 | ACCTGCTAGCTGGTTAGTGTC | 59.449 | 52.381 | 33.67 | 0.00 | 44.20 | 3.67 |
770 | 786 | 1.645710 | ACCTGCTAGCTGGTTAGTGT | 58.354 | 50.000 | 33.67 | 15.38 | 44.20 | 3.55 |
771 | 787 | 2.761208 | ACTACCTGCTAGCTGGTTAGTG | 59.239 | 50.000 | 40.38 | 29.70 | 44.20 | 2.74 |
772 | 788 | 3.103080 | ACTACCTGCTAGCTGGTTAGT | 57.897 | 47.619 | 40.38 | 33.76 | 44.20 | 2.24 |
773 | 789 | 5.768662 | TGTATACTACCTGCTAGCTGGTTAG | 59.231 | 44.000 | 40.38 | 33.28 | 44.20 | 2.34 |
774 | 790 | 5.698104 | TGTATACTACCTGCTAGCTGGTTA | 58.302 | 41.667 | 40.38 | 30.18 | 44.20 | 2.85 |
775 | 791 | 4.543689 | TGTATACTACCTGCTAGCTGGTT | 58.456 | 43.478 | 40.38 | 29.25 | 44.20 | 3.67 |
777 | 793 | 5.710567 | TGTATGTATACTACCTGCTAGCTGG | 59.289 | 44.000 | 32.42 | 32.42 | 36.48 | 4.85 |
778 | 794 | 6.431543 | AGTGTATGTATACTACCTGCTAGCTG | 59.568 | 42.308 | 17.23 | 15.65 | 34.41 | 4.24 |
779 | 795 | 6.544650 | AGTGTATGTATACTACCTGCTAGCT | 58.455 | 40.000 | 17.23 | 0.00 | 34.41 | 3.32 |
780 | 796 | 6.430308 | TGAGTGTATGTATACTACCTGCTAGC | 59.570 | 42.308 | 8.10 | 8.10 | 34.41 | 3.42 |
781 | 797 | 7.981102 | TGAGTGTATGTATACTACCTGCTAG | 57.019 | 40.000 | 4.17 | 0.00 | 34.41 | 3.42 |
782 | 798 | 8.161425 | TCATGAGTGTATGTATACTACCTGCTA | 58.839 | 37.037 | 4.17 | 0.00 | 34.41 | 3.49 |
783 | 799 | 7.004691 | TCATGAGTGTATGTATACTACCTGCT | 58.995 | 38.462 | 4.17 | 3.71 | 34.41 | 4.24 |
784 | 800 | 7.215719 | TCATGAGTGTATGTATACTACCTGC | 57.784 | 40.000 | 4.17 | 0.00 | 34.41 | 4.85 |
785 | 801 | 7.175816 | AGCTCATGAGTGTATGTATACTACCTG | 59.824 | 40.741 | 23.38 | 0.00 | 34.41 | 4.00 |
786 | 802 | 7.235079 | AGCTCATGAGTGTATGTATACTACCT | 58.765 | 38.462 | 23.38 | 3.80 | 34.41 | 3.08 |
787 | 803 | 7.175119 | TGAGCTCATGAGTGTATGTATACTACC | 59.825 | 40.741 | 23.38 | 1.50 | 34.41 | 3.18 |
788 | 804 | 8.018520 | GTGAGCTCATGAGTGTATGTATACTAC | 58.981 | 40.741 | 21.47 | 5.22 | 34.41 | 2.73 |
789 | 805 | 7.719633 | TGTGAGCTCATGAGTGTATGTATACTA | 59.280 | 37.037 | 21.47 | 0.00 | 34.41 | 1.82 |
790 | 806 | 6.547510 | TGTGAGCTCATGAGTGTATGTATACT | 59.452 | 38.462 | 21.47 | 8.10 | 34.41 | 2.12 |
791 | 807 | 6.739112 | TGTGAGCTCATGAGTGTATGTATAC | 58.261 | 40.000 | 21.47 | 10.35 | 0.00 | 1.47 |
792 | 808 | 6.959639 | TGTGAGCTCATGAGTGTATGTATA | 57.040 | 37.500 | 21.47 | 0.62 | 0.00 | 1.47 |
793 | 809 | 5.859205 | TGTGAGCTCATGAGTGTATGTAT | 57.141 | 39.130 | 21.47 | 0.79 | 0.00 | 2.29 |
794 | 810 | 5.410924 | GTTGTGAGCTCATGAGTGTATGTA | 58.589 | 41.667 | 21.47 | 2.82 | 0.00 | 2.29 |
795 | 811 | 4.248859 | GTTGTGAGCTCATGAGTGTATGT | 58.751 | 43.478 | 21.47 | 2.47 | 0.00 | 2.29 |
796 | 812 | 3.620374 | GGTTGTGAGCTCATGAGTGTATG | 59.380 | 47.826 | 21.47 | 0.00 | 0.00 | 2.39 |
797 | 813 | 3.369892 | GGGTTGTGAGCTCATGAGTGTAT | 60.370 | 47.826 | 21.47 | 7.95 | 0.00 | 2.29 |
798 | 814 | 2.028112 | GGGTTGTGAGCTCATGAGTGTA | 60.028 | 50.000 | 21.47 | 7.61 | 0.00 | 2.90 |
799 | 815 | 1.271054 | GGGTTGTGAGCTCATGAGTGT | 60.271 | 52.381 | 21.47 | 11.69 | 0.00 | 3.55 |
800 | 816 | 1.002888 | AGGGTTGTGAGCTCATGAGTG | 59.997 | 52.381 | 21.47 | 0.72 | 0.00 | 3.51 |
801 | 817 | 1.277557 | GAGGGTTGTGAGCTCATGAGT | 59.722 | 52.381 | 21.47 | 10.70 | 0.00 | 3.41 |
802 | 818 | 1.554160 | AGAGGGTTGTGAGCTCATGAG | 59.446 | 52.381 | 21.47 | 18.84 | 0.00 | 2.90 |
803 | 819 | 1.649321 | AGAGGGTTGTGAGCTCATGA | 58.351 | 50.000 | 21.47 | 8.85 | 0.00 | 3.07 |
804 | 820 | 2.486472 | AAGAGGGTTGTGAGCTCATG | 57.514 | 50.000 | 21.47 | 0.00 | 0.00 | 3.07 |
805 | 821 | 2.787994 | CAAAGAGGGTTGTGAGCTCAT | 58.212 | 47.619 | 21.47 | 1.50 | 0.00 | 2.90 |
806 | 822 | 1.815408 | GCAAAGAGGGTTGTGAGCTCA | 60.815 | 52.381 | 13.74 | 13.74 | 0.00 | 4.26 |
807 | 823 | 0.877743 | GCAAAGAGGGTTGTGAGCTC | 59.122 | 55.000 | 6.82 | 6.82 | 0.00 | 4.09 |
808 | 824 | 0.538287 | GGCAAAGAGGGTTGTGAGCT | 60.538 | 55.000 | 0.00 | 0.00 | 0.00 | 4.09 |
917 | 933 | 2.544685 | AGCAACTTAGCGTGCAGATAG | 58.455 | 47.619 | 10.46 | 0.00 | 40.15 | 2.08 |
921 | 937 | 0.867746 | TGAAGCAACTTAGCGTGCAG | 59.132 | 50.000 | 10.46 | 0.00 | 40.15 | 4.41 |
1103 | 1120 | 2.531685 | ACAGCACCCAGGGCCTAA | 60.532 | 61.111 | 5.28 | 0.00 | 0.00 | 2.69 |
1255 | 1273 | 7.189693 | TCGTTAAACTTCTTGTACGACTAGA | 57.810 | 36.000 | 0.00 | 0.00 | 33.65 | 2.43 |
1296 | 1314 | 0.443869 | CATGTGCAAGTACCTGACGC | 59.556 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
1333 | 1351 | 4.358851 | GCGCATCAACTAAAATTGCCATA | 58.641 | 39.130 | 0.30 | 0.00 | 0.00 | 2.74 |
1336 | 1354 | 1.583404 | CGCGCATCAACTAAAATTGCC | 59.417 | 47.619 | 8.75 | 0.00 | 0.00 | 4.52 |
1344 | 1362 | 0.529773 | GGACATCCGCGCATCAACTA | 60.530 | 55.000 | 8.75 | 0.00 | 0.00 | 2.24 |
1355 | 1373 | 5.095490 | GCTTGTAAGAAAAATGGACATCCG | 58.905 | 41.667 | 0.00 | 0.00 | 39.43 | 4.18 |
1361 | 1379 | 4.340666 | TGCTGTGCTTGTAAGAAAAATGGA | 59.659 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
1370 | 1388 | 4.874970 | AGGAAAATTGCTGTGCTTGTAAG | 58.125 | 39.130 | 0.00 | 0.00 | 0.00 | 2.34 |
1381 | 1400 | 9.208022 | GTTTATCTTTTTGCTAGGAAAATTGCT | 57.792 | 29.630 | 20.96 | 11.90 | 0.00 | 3.91 |
1382 | 1401 | 9.208022 | AGTTTATCTTTTTGCTAGGAAAATTGC | 57.792 | 29.630 | 20.96 | 8.93 | 0.00 | 3.56 |
1408 | 1427 | 3.119388 | GCAAGCATGGCAAATCTGTCTTA | 60.119 | 43.478 | 0.00 | 0.00 | 32.79 | 2.10 |
1421 | 1440 | 1.549203 | AGTTTAGTGGGCAAGCATGG | 58.451 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
1474 | 1493 | 1.537990 | GCACATGGCAAAAGGAACGTT | 60.538 | 47.619 | 0.00 | 0.00 | 43.97 | 3.99 |
1475 | 1494 | 0.031994 | GCACATGGCAAAAGGAACGT | 59.968 | 50.000 | 0.00 | 0.00 | 43.97 | 3.99 |
1476 | 1495 | 2.813100 | GCACATGGCAAAAGGAACG | 58.187 | 52.632 | 0.00 | 0.00 | 43.97 | 3.95 |
1502 | 1521 | 7.125659 | TGGAATCTGATAAAGTACCTGATGTCA | 59.874 | 37.037 | 0.00 | 0.00 | 0.00 | 3.58 |
1506 | 1525 | 8.095452 | ACTTGGAATCTGATAAAGTACCTGAT | 57.905 | 34.615 | 10.04 | 0.00 | 29.56 | 2.90 |
1520 | 1539 | 8.970691 | AACAAATCGATTAAACTTGGAATCTG | 57.029 | 30.769 | 11.83 | 3.68 | 31.15 | 2.90 |
1521 | 1540 | 9.014297 | AGAACAAATCGATTAAACTTGGAATCT | 57.986 | 29.630 | 11.83 | 8.23 | 31.15 | 2.40 |
1612 | 1631 | 8.730680 | GTCACATAAATGGACTGTTAAGATGTT | 58.269 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
1615 | 1634 | 7.103641 | ACGTCACATAAATGGACTGTTAAGAT | 58.896 | 34.615 | 8.79 | 0.00 | 0.00 | 2.40 |
1661 | 1680 | 4.411540 | AGGCACATCTCTATGAGTTGGATT | 59.588 | 41.667 | 9.52 | 0.00 | 34.70 | 3.01 |
1680 | 1699 | 3.430453 | CTCCCCTTCATTTTGTTAGGCA | 58.570 | 45.455 | 0.00 | 0.00 | 0.00 | 4.75 |
1760 | 1785 | 4.323477 | GCCCACCACACTGCGGTA | 62.323 | 66.667 | 0.00 | 0.00 | 34.02 | 4.02 |
1830 | 1855 | 3.674955 | CGATGTAGATCAACGGTGGTGAA | 60.675 | 47.826 | 0.00 | 0.00 | 38.39 | 3.18 |
1898 | 1923 | 8.398878 | TGTTGAAAAGGGTAGGTAATAGTTTG | 57.601 | 34.615 | 0.00 | 0.00 | 0.00 | 2.93 |
1919 | 1944 | 0.250553 | TTGCCGGTAGACCCTTGTTG | 60.251 | 55.000 | 1.90 | 0.00 | 0.00 | 3.33 |
2009 | 2037 | 1.450312 | CACCTCTGGCCCGATCAAC | 60.450 | 63.158 | 0.00 | 0.00 | 0.00 | 3.18 |
2258 | 2286 | 4.242475 | CGGTTCTGCACTAGTGATAACAA | 58.758 | 43.478 | 27.08 | 7.91 | 0.00 | 2.83 |
2265 | 2293 | 1.741770 | GCCCGGTTCTGCACTAGTG | 60.742 | 63.158 | 18.93 | 18.93 | 0.00 | 2.74 |
2266 | 2294 | 1.764571 | TTGCCCGGTTCTGCACTAGT | 61.765 | 55.000 | 0.00 | 0.00 | 37.18 | 2.57 |
2267 | 2295 | 0.392998 | ATTGCCCGGTTCTGCACTAG | 60.393 | 55.000 | 0.00 | 0.00 | 37.18 | 2.57 |
2269 | 2297 | 0.392998 | CTATTGCCCGGTTCTGCACT | 60.393 | 55.000 | 0.00 | 0.00 | 37.18 | 4.40 |
2270 | 2298 | 1.993369 | GCTATTGCCCGGTTCTGCAC | 61.993 | 60.000 | 0.00 | 0.00 | 37.18 | 4.57 |
2271 | 2299 | 1.748879 | GCTATTGCCCGGTTCTGCA | 60.749 | 57.895 | 0.00 | 0.00 | 35.27 | 4.41 |
2272 | 2300 | 1.748879 | TGCTATTGCCCGGTTCTGC | 60.749 | 57.895 | 0.00 | 0.00 | 38.71 | 4.26 |
2275 | 2303 | 2.469516 | CGGTGCTATTGCCCGGTTC | 61.470 | 63.158 | 16.86 | 0.00 | 43.94 | 3.62 |
2276 | 2304 | 2.265467 | ATCGGTGCTATTGCCCGGTT | 62.265 | 55.000 | 21.56 | 11.69 | 45.99 | 4.44 |
2277 | 2305 | 2.265467 | AATCGGTGCTATTGCCCGGT | 62.265 | 55.000 | 21.56 | 15.64 | 45.99 | 5.28 |
2278 | 2306 | 1.507141 | GAATCGGTGCTATTGCCCGG | 61.507 | 60.000 | 21.56 | 0.00 | 45.99 | 5.73 |
2279 | 2307 | 1.831389 | CGAATCGGTGCTATTGCCCG | 61.831 | 60.000 | 17.97 | 17.97 | 46.73 | 6.13 |
2280 | 2308 | 0.814010 | ACGAATCGGTGCTATTGCCC | 60.814 | 55.000 | 7.80 | 0.00 | 38.71 | 5.36 |
2281 | 2309 | 1.860676 | TACGAATCGGTGCTATTGCC | 58.139 | 50.000 | 7.80 | 0.00 | 38.71 | 4.52 |
2282 | 2310 | 2.221055 | CCTTACGAATCGGTGCTATTGC | 59.779 | 50.000 | 7.80 | 0.00 | 40.20 | 3.56 |
2283 | 2311 | 3.454375 | ACCTTACGAATCGGTGCTATTG | 58.546 | 45.455 | 7.80 | 0.00 | 0.00 | 1.90 |
2284 | 2312 | 3.492137 | GGACCTTACGAATCGGTGCTATT | 60.492 | 47.826 | 7.80 | 0.00 | 36.38 | 1.73 |
2285 | 2313 | 2.035576 | GGACCTTACGAATCGGTGCTAT | 59.964 | 50.000 | 7.80 | 0.00 | 36.38 | 2.97 |
2286 | 2314 | 1.406539 | GGACCTTACGAATCGGTGCTA | 59.593 | 52.381 | 7.80 | 0.00 | 36.38 | 3.49 |
2287 | 2315 | 0.175073 | GGACCTTACGAATCGGTGCT | 59.825 | 55.000 | 7.80 | 0.00 | 36.38 | 4.40 |
2288 | 2316 | 0.175073 | AGGACCTTACGAATCGGTGC | 59.825 | 55.000 | 7.80 | 0.10 | 39.17 | 5.01 |
2289 | 2317 | 2.667473 | AAGGACCTTACGAATCGGTG | 57.333 | 50.000 | 4.44 | 0.00 | 0.00 | 4.94 |
2290 | 2318 | 3.766051 | ACTAAAGGACCTTACGAATCGGT | 59.234 | 43.478 | 7.30 | 0.00 | 0.00 | 4.69 |
2291 | 2319 | 4.110482 | CACTAAAGGACCTTACGAATCGG | 58.890 | 47.826 | 7.30 | 0.00 | 0.00 | 4.18 |
2292 | 2320 | 3.550678 | GCACTAAAGGACCTTACGAATCG | 59.449 | 47.826 | 7.30 | 0.00 | 0.00 | 3.34 |
2293 | 2321 | 3.869832 | GGCACTAAAGGACCTTACGAATC | 59.130 | 47.826 | 7.30 | 0.00 | 0.00 | 2.52 |
2294 | 2322 | 3.677976 | CGGCACTAAAGGACCTTACGAAT | 60.678 | 47.826 | 7.30 | 0.00 | 0.00 | 3.34 |
2295 | 2323 | 2.353011 | CGGCACTAAAGGACCTTACGAA | 60.353 | 50.000 | 7.30 | 0.00 | 0.00 | 3.85 |
2296 | 2324 | 1.203052 | CGGCACTAAAGGACCTTACGA | 59.797 | 52.381 | 7.30 | 0.00 | 0.00 | 3.43 |
2297 | 2325 | 1.636988 | CGGCACTAAAGGACCTTACG | 58.363 | 55.000 | 7.30 | 4.18 | 0.00 | 3.18 |
2298 | 2326 | 1.277273 | ACCGGCACTAAAGGACCTTAC | 59.723 | 52.381 | 7.30 | 0.00 | 0.00 | 2.34 |
2299 | 2327 | 1.648116 | ACCGGCACTAAAGGACCTTA | 58.352 | 50.000 | 7.30 | 0.00 | 0.00 | 2.69 |
2300 | 2328 | 0.769247 | AACCGGCACTAAAGGACCTT | 59.231 | 50.000 | 0.00 | 0.00 | 0.00 | 3.50 |
2301 | 2329 | 0.323957 | GAACCGGCACTAAAGGACCT | 59.676 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2302 | 2330 | 0.035739 | TGAACCGGCACTAAAGGACC | 59.964 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2303 | 2331 | 1.439679 | CTGAACCGGCACTAAAGGAC | 58.560 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2304 | 2332 | 0.323629 | CCTGAACCGGCACTAAAGGA | 59.676 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2305 | 2333 | 0.323629 | TCCTGAACCGGCACTAAAGG | 59.676 | 55.000 | 0.00 | 0.00 | 0.00 | 3.11 |
2306 | 2334 | 1.804748 | GTTCCTGAACCGGCACTAAAG | 59.195 | 52.381 | 0.00 | 0.00 | 35.36 | 1.85 |
2307 | 2335 | 1.886886 | GTTCCTGAACCGGCACTAAA | 58.113 | 50.000 | 0.00 | 0.00 | 35.36 | 1.85 |
2308 | 2336 | 3.618171 | GTTCCTGAACCGGCACTAA | 57.382 | 52.632 | 0.00 | 0.00 | 35.36 | 2.24 |
2317 | 2345 | 5.453567 | AACTTTAATGCTGGTTCCTGAAC | 57.546 | 39.130 | 1.33 | 1.33 | 40.45 | 3.18 |
2318 | 2346 | 5.278266 | CGAAACTTTAATGCTGGTTCCTGAA | 60.278 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2319 | 2347 | 4.215399 | CGAAACTTTAATGCTGGTTCCTGA | 59.785 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
2320 | 2348 | 4.475944 | CGAAACTTTAATGCTGGTTCCTG | 58.524 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
2321 | 2349 | 3.506067 | CCGAAACTTTAATGCTGGTTCCT | 59.494 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
2322 | 2350 | 3.833442 | CCGAAACTTTAATGCTGGTTCC | 58.167 | 45.455 | 0.00 | 0.00 | 0.00 | 3.62 |
2323 | 2351 | 3.242518 | GCCGAAACTTTAATGCTGGTTC | 58.757 | 45.455 | 0.00 | 0.00 | 0.00 | 3.62 |
2324 | 2352 | 2.625790 | TGCCGAAACTTTAATGCTGGTT | 59.374 | 40.909 | 0.00 | 0.00 | 0.00 | 3.67 |
2325 | 2353 | 2.030274 | GTGCCGAAACTTTAATGCTGGT | 60.030 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
2326 | 2354 | 2.228822 | AGTGCCGAAACTTTAATGCTGG | 59.771 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
2327 | 2355 | 3.559238 | AGTGCCGAAACTTTAATGCTG | 57.441 | 42.857 | 0.00 | 0.00 | 0.00 | 4.41 |
2328 | 2356 | 5.335661 | CCTTTAGTGCCGAAACTTTAATGCT | 60.336 | 40.000 | 0.00 | 0.00 | 0.00 | 3.79 |
2329 | 2357 | 4.857037 | CCTTTAGTGCCGAAACTTTAATGC | 59.143 | 41.667 | 0.00 | 0.00 | 0.00 | 3.56 |
2330 | 2358 | 4.857037 | GCCTTTAGTGCCGAAACTTTAATG | 59.143 | 41.667 | 0.00 | 0.00 | 0.00 | 1.90 |
2331 | 2359 | 4.082408 | GGCCTTTAGTGCCGAAACTTTAAT | 60.082 | 41.667 | 0.00 | 0.00 | 39.48 | 1.40 |
2332 | 2360 | 3.253921 | GGCCTTTAGTGCCGAAACTTTAA | 59.746 | 43.478 | 0.00 | 0.00 | 39.48 | 1.52 |
2333 | 2361 | 2.815503 | GGCCTTTAGTGCCGAAACTTTA | 59.184 | 45.455 | 0.00 | 0.00 | 39.48 | 1.85 |
2334 | 2362 | 1.611977 | GGCCTTTAGTGCCGAAACTTT | 59.388 | 47.619 | 0.00 | 0.00 | 39.48 | 2.66 |
2335 | 2363 | 1.244816 | GGCCTTTAGTGCCGAAACTT | 58.755 | 50.000 | 0.00 | 0.00 | 39.48 | 2.66 |
2336 | 2364 | 2.942641 | GGCCTTTAGTGCCGAAACT | 58.057 | 52.632 | 0.00 | 0.00 | 39.48 | 2.66 |
2359 | 2387 | 1.208776 | CTGAACCGGTACTAAAGGGGG | 59.791 | 57.143 | 8.00 | 0.00 | 0.00 | 5.40 |
2360 | 2388 | 1.406477 | GCTGAACCGGTACTAAAGGGG | 60.406 | 57.143 | 8.00 | 0.00 | 0.00 | 4.79 |
2361 | 2389 | 1.276989 | TGCTGAACCGGTACTAAAGGG | 59.723 | 52.381 | 8.00 | 0.00 | 0.00 | 3.95 |
2362 | 2390 | 2.754946 | TGCTGAACCGGTACTAAAGG | 57.245 | 50.000 | 8.00 | 0.00 | 0.00 | 3.11 |
2363 | 2391 | 3.857052 | TCATGCTGAACCGGTACTAAAG | 58.143 | 45.455 | 8.00 | 2.29 | 0.00 | 1.85 |
2364 | 2392 | 3.965379 | TCATGCTGAACCGGTACTAAA | 57.035 | 42.857 | 8.00 | 0.00 | 0.00 | 1.85 |
2365 | 2393 | 3.965379 | TTCATGCTGAACCGGTACTAA | 57.035 | 42.857 | 8.00 | 0.00 | 30.26 | 2.24 |
2375 | 2403 | 3.667087 | GCACCGGTTCATGCTGAA | 58.333 | 55.556 | 2.97 | 0.00 | 38.84 | 3.02 |
2379 | 2407 | 1.135402 | CCTTTTAGCACCGGTTCATGC | 60.135 | 52.381 | 2.97 | 5.25 | 42.39 | 4.06 |
2380 | 2408 | 2.432444 | TCCTTTTAGCACCGGTTCATG | 58.568 | 47.619 | 2.97 | 0.00 | 0.00 | 3.07 |
2381 | 2409 | 2.871096 | TCCTTTTAGCACCGGTTCAT | 57.129 | 45.000 | 2.97 | 0.00 | 0.00 | 2.57 |
2382 | 2410 | 2.619646 | GTTTCCTTTTAGCACCGGTTCA | 59.380 | 45.455 | 2.97 | 0.00 | 0.00 | 3.18 |
2383 | 2411 | 2.030540 | GGTTTCCTTTTAGCACCGGTTC | 60.031 | 50.000 | 2.97 | 0.00 | 0.00 | 3.62 |
2384 | 2412 | 1.958579 | GGTTTCCTTTTAGCACCGGTT | 59.041 | 47.619 | 2.97 | 0.00 | 0.00 | 4.44 |
2385 | 2413 | 1.133730 | TGGTTTCCTTTTAGCACCGGT | 60.134 | 47.619 | 0.00 | 0.00 | 0.00 | 5.28 |
2386 | 2414 | 1.268625 | GTGGTTTCCTTTTAGCACCGG | 59.731 | 52.381 | 0.00 | 0.00 | 36.92 | 5.28 |
2387 | 2415 | 1.069500 | CGTGGTTTCCTTTTAGCACCG | 60.069 | 52.381 | 0.00 | 0.00 | 39.05 | 4.94 |
2388 | 2416 | 1.951602 | ACGTGGTTTCCTTTTAGCACC | 59.048 | 47.619 | 0.00 | 0.00 | 39.05 | 5.01 |
2389 | 2417 | 2.287368 | CCACGTGGTTTCCTTTTAGCAC | 60.287 | 50.000 | 26.95 | 0.00 | 38.91 | 4.40 |
2390 | 2418 | 1.950909 | CCACGTGGTTTCCTTTTAGCA | 59.049 | 47.619 | 26.95 | 0.00 | 0.00 | 3.49 |
2391 | 2419 | 1.335597 | GCCACGTGGTTTCCTTTTAGC | 60.336 | 52.381 | 33.92 | 12.50 | 37.57 | 3.09 |
2392 | 2420 | 1.950909 | TGCCACGTGGTTTCCTTTTAG | 59.049 | 47.619 | 33.92 | 6.07 | 37.57 | 1.85 |
2393 | 2421 | 1.677052 | GTGCCACGTGGTTTCCTTTTA | 59.323 | 47.619 | 33.92 | 8.23 | 37.57 | 1.52 |
2394 | 2422 | 0.458260 | GTGCCACGTGGTTTCCTTTT | 59.542 | 50.000 | 33.92 | 0.00 | 37.57 | 2.27 |
2395 | 2423 | 1.720694 | CGTGCCACGTGGTTTCCTTT | 61.721 | 55.000 | 33.92 | 0.00 | 36.74 | 3.11 |
2396 | 2424 | 2.184167 | CGTGCCACGTGGTTTCCTT | 61.184 | 57.895 | 33.92 | 0.00 | 36.74 | 3.36 |
2397 | 2425 | 2.590575 | CGTGCCACGTGGTTTCCT | 60.591 | 61.111 | 33.92 | 0.00 | 36.74 | 3.36 |
2398 | 2426 | 2.589442 | TCGTGCCACGTGGTTTCC | 60.589 | 61.111 | 33.92 | 18.72 | 43.14 | 3.13 |
2399 | 2427 | 1.828331 | GACTCGTGCCACGTGGTTTC | 61.828 | 60.000 | 33.92 | 22.22 | 43.14 | 2.78 |
2400 | 2428 | 1.885850 | GACTCGTGCCACGTGGTTT | 60.886 | 57.895 | 33.92 | 13.19 | 43.14 | 3.27 |
2401 | 2429 | 2.279918 | GACTCGTGCCACGTGGTT | 60.280 | 61.111 | 33.92 | 12.83 | 43.14 | 3.67 |
2402 | 2430 | 3.499929 | CTGACTCGTGCCACGTGGT | 62.500 | 63.158 | 33.92 | 14.84 | 43.14 | 4.16 |
2403 | 2431 | 2.734723 | CTGACTCGTGCCACGTGG | 60.735 | 66.667 | 30.66 | 30.66 | 43.14 | 4.94 |
2404 | 2432 | 3.406361 | GCTGACTCGTGCCACGTG | 61.406 | 66.667 | 17.83 | 17.30 | 43.14 | 4.49 |
2405 | 2433 | 3.559657 | GAGCTGACTCGTGCCACGT | 62.560 | 63.158 | 17.83 | 0.00 | 43.14 | 4.49 |
2406 | 2434 | 2.807045 | GAGCTGACTCGTGCCACG | 60.807 | 66.667 | 11.80 | 11.80 | 44.19 | 4.94 |
2407 | 2435 | 2.433318 | GGAGCTGACTCGTGCCAC | 60.433 | 66.667 | 0.00 | 0.00 | 44.48 | 5.01 |
2408 | 2436 | 4.056125 | CGGAGCTGACTCGTGCCA | 62.056 | 66.667 | 0.00 | 0.00 | 44.48 | 4.92 |
2409 | 2437 | 4.803426 | CCGGAGCTGACTCGTGCC | 62.803 | 72.222 | 0.00 | 0.00 | 44.48 | 5.01 |
2410 | 2438 | 4.803426 | CCCGGAGCTGACTCGTGC | 62.803 | 72.222 | 0.73 | 0.00 | 44.48 | 5.34 |
2411 | 2439 | 4.135153 | CCCCGGAGCTGACTCGTG | 62.135 | 72.222 | 0.73 | 0.00 | 44.48 | 4.35 |
2429 | 2457 | 1.145598 | GTACTAAAGGGCTCCCGGC | 59.854 | 63.158 | 0.00 | 0.00 | 41.95 | 6.13 |
2430 | 2458 | 1.828081 | GGTACTAAAGGGCTCCCGG | 59.172 | 63.158 | 0.00 | 0.00 | 41.95 | 5.73 |
2431 | 2459 | 1.440476 | CGGTACTAAAGGGCTCCCG | 59.560 | 63.158 | 0.00 | 0.00 | 41.95 | 5.14 |
2432 | 2460 | 0.979709 | ACCGGTACTAAAGGGCTCCC | 60.980 | 60.000 | 4.49 | 0.00 | 0.00 | 4.30 |
2433 | 2461 | 0.907486 | AACCGGTACTAAAGGGCTCC | 59.093 | 55.000 | 8.00 | 0.00 | 0.00 | 4.70 |
2434 | 2462 | 1.406477 | CCAACCGGTACTAAAGGGCTC | 60.406 | 57.143 | 8.00 | 0.00 | 0.00 | 4.70 |
2435 | 2463 | 0.616891 | CCAACCGGTACTAAAGGGCT | 59.383 | 55.000 | 8.00 | 0.00 | 0.00 | 5.19 |
2436 | 2464 | 0.325933 | ACCAACCGGTACTAAAGGGC | 59.674 | 55.000 | 8.00 | 0.00 | 46.71 | 5.19 |
2445 | 2473 | 3.523547 | CGATTGATGTTACCAACCGGTA | 58.476 | 45.455 | 8.00 | 0.00 | 46.71 | 4.02 |
2446 | 2474 | 2.937873 | CCGATTGATGTTACCAACCGGT | 60.938 | 50.000 | 0.00 | 0.00 | 43.77 | 5.28 |
2447 | 2475 | 1.668751 | CCGATTGATGTTACCAACCGG | 59.331 | 52.381 | 0.00 | 0.00 | 43.36 | 5.28 |
2448 | 2476 | 2.352388 | ACCGATTGATGTTACCAACCG | 58.648 | 47.619 | 0.00 | 0.00 | 30.71 | 4.44 |
2449 | 2477 | 4.510571 | AGTACCGATTGATGTTACCAACC | 58.489 | 43.478 | 0.00 | 0.00 | 0.00 | 3.77 |
2450 | 2478 | 7.599630 | TTTAGTACCGATTGATGTTACCAAC | 57.400 | 36.000 | 0.00 | 0.00 | 0.00 | 3.77 |
2451 | 2479 | 8.670135 | CATTTTAGTACCGATTGATGTTACCAA | 58.330 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
2452 | 2480 | 7.825270 | ACATTTTAGTACCGATTGATGTTACCA | 59.175 | 33.333 | 0.00 | 0.00 | 0.00 | 3.25 |
2453 | 2481 | 8.205131 | ACATTTTAGTACCGATTGATGTTACC | 57.795 | 34.615 | 0.00 | 0.00 | 0.00 | 2.85 |
2456 | 2484 | 8.026607 | CCAAACATTTTAGTACCGATTGATGTT | 58.973 | 33.333 | 0.00 | 0.00 | 37.89 | 2.71 |
2457 | 2485 | 7.362574 | CCCAAACATTTTAGTACCGATTGATGT | 60.363 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
2458 | 2486 | 6.972328 | CCCAAACATTTTAGTACCGATTGATG | 59.028 | 38.462 | 0.00 | 0.00 | 0.00 | 3.07 |
2459 | 2487 | 6.096282 | CCCCAAACATTTTAGTACCGATTGAT | 59.904 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
2460 | 2488 | 5.416326 | CCCCAAACATTTTAGTACCGATTGA | 59.584 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2461 | 2489 | 5.393678 | CCCCCAAACATTTTAGTACCGATTG | 60.394 | 44.000 | 0.00 | 0.00 | 0.00 | 2.67 |
2462 | 2490 | 4.707934 | CCCCCAAACATTTTAGTACCGATT | 59.292 | 41.667 | 0.00 | 0.00 | 0.00 | 3.34 |
2463 | 2491 | 4.264038 | ACCCCCAAACATTTTAGTACCGAT | 60.264 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
2464 | 2492 | 3.074242 | ACCCCCAAACATTTTAGTACCGA | 59.926 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
2465 | 2493 | 3.423749 | ACCCCCAAACATTTTAGTACCG | 58.576 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
2466 | 2494 | 5.811796 | AAACCCCCAAACATTTTAGTACC | 57.188 | 39.130 | 0.00 | 0.00 | 0.00 | 3.34 |
2467 | 2495 | 6.483974 | CCAAAAACCCCCAAACATTTTAGTAC | 59.516 | 38.462 | 0.00 | 0.00 | 0.00 | 2.73 |
2468 | 2496 | 6.158169 | ACCAAAAACCCCCAAACATTTTAGTA | 59.842 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
2469 | 2497 | 5.044772 | ACCAAAAACCCCCAAACATTTTAGT | 60.045 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2470 | 2498 | 5.441500 | ACCAAAAACCCCCAAACATTTTAG | 58.558 | 37.500 | 0.00 | 0.00 | 0.00 | 1.85 |
2471 | 2499 | 5.452341 | ACCAAAAACCCCCAAACATTTTA | 57.548 | 34.783 | 0.00 | 0.00 | 0.00 | 1.52 |
2472 | 2500 | 4.323569 | ACCAAAAACCCCCAAACATTTT | 57.676 | 36.364 | 0.00 | 0.00 | 0.00 | 1.82 |
2473 | 2501 | 4.323569 | AACCAAAAACCCCCAAACATTT | 57.676 | 36.364 | 0.00 | 0.00 | 0.00 | 2.32 |
2474 | 2502 | 4.323569 | AAACCAAAAACCCCCAAACATT | 57.676 | 36.364 | 0.00 | 0.00 | 0.00 | 2.71 |
2475 | 2503 | 4.323569 | AAAACCAAAAACCCCCAAACAT | 57.676 | 36.364 | 0.00 | 0.00 | 0.00 | 2.71 |
2476 | 2504 | 3.808834 | AAAACCAAAAACCCCCAAACA | 57.191 | 38.095 | 0.00 | 0.00 | 0.00 | 2.83 |
2477 | 2505 | 5.437946 | TCATAAAACCAAAAACCCCCAAAC | 58.562 | 37.500 | 0.00 | 0.00 | 0.00 | 2.93 |
2478 | 2506 | 5.710409 | TCATAAAACCAAAAACCCCCAAA | 57.290 | 34.783 | 0.00 | 0.00 | 0.00 | 3.28 |
2479 | 2507 | 5.913946 | ATCATAAAACCAAAAACCCCCAA | 57.086 | 34.783 | 0.00 | 0.00 | 0.00 | 4.12 |
2480 | 2508 | 5.913946 | AATCATAAAACCAAAAACCCCCA | 57.086 | 34.783 | 0.00 | 0.00 | 0.00 | 4.96 |
2481 | 2509 | 7.589958 | AAAAATCATAAAACCAAAAACCCCC | 57.410 | 32.000 | 0.00 | 0.00 | 0.00 | 5.40 |
2528 | 2556 | 9.535878 | ACCAGCAAACGAAAAAGAATTAAAATA | 57.464 | 25.926 | 0.00 | 0.00 | 0.00 | 1.40 |
2529 | 2557 | 8.432110 | ACCAGCAAACGAAAAAGAATTAAAAT | 57.568 | 26.923 | 0.00 | 0.00 | 0.00 | 1.82 |
2530 | 2558 | 7.835634 | ACCAGCAAACGAAAAAGAATTAAAA | 57.164 | 28.000 | 0.00 | 0.00 | 0.00 | 1.52 |
2531 | 2559 | 9.535878 | AATACCAGCAAACGAAAAAGAATTAAA | 57.464 | 25.926 | 0.00 | 0.00 | 0.00 | 1.52 |
2532 | 2560 | 9.535878 | AAATACCAGCAAACGAAAAAGAATTAA | 57.464 | 25.926 | 0.00 | 0.00 | 0.00 | 1.40 |
2533 | 2561 | 9.535878 | AAAATACCAGCAAACGAAAAAGAATTA | 57.464 | 25.926 | 0.00 | 0.00 | 0.00 | 1.40 |
2534 | 2562 | 8.432110 | AAAATACCAGCAAACGAAAAAGAATT | 57.568 | 26.923 | 0.00 | 0.00 | 0.00 | 2.17 |
2535 | 2563 | 8.974408 | GTAAAATACCAGCAAACGAAAAAGAAT | 58.026 | 29.630 | 0.00 | 0.00 | 0.00 | 2.40 |
2536 | 2564 | 7.166142 | CGTAAAATACCAGCAAACGAAAAAGAA | 59.834 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
2537 | 2565 | 6.633634 | CGTAAAATACCAGCAAACGAAAAAGA | 59.366 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
2538 | 2566 | 6.129300 | CCGTAAAATACCAGCAAACGAAAAAG | 60.129 | 38.462 | 0.00 | 0.00 | 0.00 | 2.27 |
2539 | 2567 | 5.686397 | CCGTAAAATACCAGCAAACGAAAAA | 59.314 | 36.000 | 0.00 | 0.00 | 0.00 | 1.94 |
2540 | 2568 | 5.213675 | CCGTAAAATACCAGCAAACGAAAA | 58.786 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
2541 | 2569 | 4.275443 | ACCGTAAAATACCAGCAAACGAAA | 59.725 | 37.500 | 0.00 | 0.00 | 0.00 | 3.46 |
2542 | 2570 | 3.814283 | ACCGTAAAATACCAGCAAACGAA | 59.186 | 39.130 | 0.00 | 0.00 | 0.00 | 3.85 |
2543 | 2571 | 3.401182 | ACCGTAAAATACCAGCAAACGA | 58.599 | 40.909 | 0.00 | 0.00 | 0.00 | 3.85 |
2544 | 2572 | 3.817148 | ACCGTAAAATACCAGCAAACG | 57.183 | 42.857 | 0.00 | 0.00 | 0.00 | 3.60 |
2545 | 2573 | 5.868043 | AGTACCGTAAAATACCAGCAAAC | 57.132 | 39.130 | 0.00 | 0.00 | 0.00 | 2.93 |
2546 | 2574 | 6.368516 | GTGTAGTACCGTAAAATACCAGCAAA | 59.631 | 38.462 | 0.00 | 0.00 | 0.00 | 3.68 |
2547 | 2575 | 5.868801 | GTGTAGTACCGTAAAATACCAGCAA | 59.131 | 40.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2548 | 2576 | 5.047448 | TGTGTAGTACCGTAAAATACCAGCA | 60.047 | 40.000 | 0.00 | 0.00 | 0.00 | 4.41 |
2549 | 2577 | 5.410067 | TGTGTAGTACCGTAAAATACCAGC | 58.590 | 41.667 | 0.00 | 0.00 | 0.00 | 4.85 |
2550 | 2578 | 8.483307 | AAATGTGTAGTACCGTAAAATACCAG | 57.517 | 34.615 | 0.00 | 0.00 | 0.00 | 4.00 |
2551 | 2579 | 8.845413 | AAAATGTGTAGTACCGTAAAATACCA | 57.155 | 30.769 | 0.00 | 0.00 | 0.00 | 3.25 |
2553 | 2581 | 9.885743 | CGTAAAATGTGTAGTACCGTAAAATAC | 57.114 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
2554 | 2582 | 9.081997 | CCGTAAAATGTGTAGTACCGTAAAATA | 57.918 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2555 | 2583 | 7.602265 | ACCGTAAAATGTGTAGTACCGTAAAAT | 59.398 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
2556 | 2584 | 6.926272 | ACCGTAAAATGTGTAGTACCGTAAAA | 59.074 | 34.615 | 0.00 | 0.00 | 0.00 | 1.52 |
2557 | 2585 | 6.451393 | ACCGTAAAATGTGTAGTACCGTAAA | 58.549 | 36.000 | 0.00 | 0.00 | 0.00 | 2.01 |
2558 | 2586 | 6.019779 | ACCGTAAAATGTGTAGTACCGTAA | 57.980 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
2559 | 2587 | 5.637006 | ACCGTAAAATGTGTAGTACCGTA | 57.363 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
2560 | 2588 | 4.519540 | ACCGTAAAATGTGTAGTACCGT | 57.480 | 40.909 | 0.00 | 0.00 | 0.00 | 4.83 |
2561 | 2589 | 5.286082 | GTGTACCGTAAAATGTGTAGTACCG | 59.714 | 44.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2562 | 2590 | 6.089417 | GTGTGTACCGTAAAATGTGTAGTACC | 59.911 | 42.308 | 0.00 | 0.00 | 0.00 | 3.34 |
2563 | 2591 | 6.640499 | TGTGTGTACCGTAAAATGTGTAGTAC | 59.360 | 38.462 | 0.00 | 0.00 | 0.00 | 2.73 |
2564 | 2592 | 6.640499 | GTGTGTGTACCGTAAAATGTGTAGTA | 59.360 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
2565 | 2593 | 5.463061 | GTGTGTGTACCGTAAAATGTGTAGT | 59.537 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2566 | 2594 | 5.462729 | TGTGTGTGTACCGTAAAATGTGTAG | 59.537 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2567 | 2595 | 5.233902 | GTGTGTGTGTACCGTAAAATGTGTA | 59.766 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2568 | 2596 | 4.034279 | GTGTGTGTGTACCGTAAAATGTGT | 59.966 | 41.667 | 0.00 | 0.00 | 0.00 | 3.72 |
2569 | 2597 | 4.520078 | GTGTGTGTGTACCGTAAAATGTG | 58.480 | 43.478 | 0.00 | 0.00 | 0.00 | 3.21 |
2570 | 2598 | 3.245754 | CGTGTGTGTGTACCGTAAAATGT | 59.754 | 43.478 | 0.00 | 0.00 | 0.00 | 2.71 |
2571 | 2599 | 3.363182 | CCGTGTGTGTGTACCGTAAAATG | 60.363 | 47.826 | 0.00 | 0.00 | 0.00 | 2.32 |
2572 | 2600 | 2.801679 | CCGTGTGTGTGTACCGTAAAAT | 59.198 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
2573 | 2601 | 2.200067 | CCGTGTGTGTGTACCGTAAAA | 58.800 | 47.619 | 0.00 | 0.00 | 0.00 | 1.52 |
2574 | 2602 | 1.135915 | ACCGTGTGTGTGTACCGTAAA | 59.864 | 47.619 | 0.00 | 0.00 | 0.00 | 2.01 |
2575 | 2603 | 0.743688 | ACCGTGTGTGTGTACCGTAA | 59.256 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2576 | 2604 | 1.535028 | CTACCGTGTGTGTGTACCGTA | 59.465 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
2577 | 2605 | 0.311790 | CTACCGTGTGTGTGTACCGT | 59.688 | 55.000 | 0.00 | 0.00 | 0.00 | 4.83 |
2578 | 2606 | 1.005294 | GCTACCGTGTGTGTGTACCG | 61.005 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2579 | 2607 | 1.005294 | CGCTACCGTGTGTGTGTACC | 61.005 | 60.000 | 0.00 | 0.00 | 0.00 | 3.34 |
2580 | 2608 | 1.611592 | GCGCTACCGTGTGTGTGTAC | 61.612 | 60.000 | 0.00 | 0.00 | 36.67 | 2.90 |
2581 | 2609 | 1.372004 | GCGCTACCGTGTGTGTGTA | 60.372 | 57.895 | 0.00 | 0.00 | 36.67 | 2.90 |
2582 | 2610 | 1.798234 | TAGCGCTACCGTGTGTGTGT | 61.798 | 55.000 | 14.45 | 0.00 | 36.67 | 3.72 |
2583 | 2611 | 0.665068 | TTAGCGCTACCGTGTGTGTG | 60.665 | 55.000 | 18.63 | 0.00 | 36.67 | 3.82 |
2584 | 2612 | 0.032403 | TTTAGCGCTACCGTGTGTGT | 59.968 | 50.000 | 18.63 | 0.00 | 36.67 | 3.72 |
2585 | 2613 | 0.713883 | CTTTAGCGCTACCGTGTGTG | 59.286 | 55.000 | 18.63 | 0.00 | 36.67 | 3.82 |
2586 | 2614 | 0.316204 | ACTTTAGCGCTACCGTGTGT | 59.684 | 50.000 | 18.63 | 6.95 | 36.67 | 3.72 |
2587 | 2615 | 1.916000 | GTACTTTAGCGCTACCGTGTG | 59.084 | 52.381 | 18.63 | 6.32 | 36.67 | 3.82 |
2588 | 2616 | 1.541147 | TGTACTTTAGCGCTACCGTGT | 59.459 | 47.619 | 18.63 | 15.00 | 36.67 | 4.49 |
2589 | 2617 | 1.916000 | GTGTACTTTAGCGCTACCGTG | 59.084 | 52.381 | 18.63 | 9.87 | 36.67 | 4.94 |
3134 | 3202 | 1.409381 | GCTAGGCCAGAAGGAAGCATT | 60.409 | 52.381 | 5.01 | 0.00 | 36.95 | 3.56 |
3173 | 3241 | 7.324388 | TGAGAGGTTTATGGGAGTCTTAAAA | 57.676 | 36.000 | 0.00 | 0.00 | 30.20 | 1.52 |
3188 | 3256 | 3.903530 | ATGTTCCCCTTTGAGAGGTTT | 57.096 | 42.857 | 0.00 | 0.00 | 44.71 | 3.27 |
3225 | 3293 | 4.449743 | CGAAGAGATTAACGTTTTGGGTCA | 59.550 | 41.667 | 5.91 | 0.00 | 0.00 | 4.02 |
3442 | 3510 | 0.881118 | GCTTTCGGTTGCATTGAGGA | 59.119 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
3457 | 3525 | 3.424829 | CGTGATTATGACGCAACTGCTTT | 60.425 | 43.478 | 0.00 | 0.00 | 39.32 | 3.51 |
3658 | 3726 | 0.249398 | GGAGGACCAGCAACGTATGT | 59.751 | 55.000 | 0.00 | 0.00 | 35.97 | 2.29 |
3685 | 3753 | 6.636454 | ATGGGAAGACAAAAGATACACCTA | 57.364 | 37.500 | 0.00 | 0.00 | 0.00 | 3.08 |
3805 | 3873 | 9.408648 | GGAAGAAGAAATCTATATTTTGGGACA | 57.591 | 33.333 | 0.00 | 0.00 | 37.42 | 4.02 |
4068 | 4143 | 1.355971 | CACTGTTTGGACGATACCGG | 58.644 | 55.000 | 0.00 | 0.00 | 40.78 | 5.28 |
4636 | 4712 | 3.054361 | GGAAGAAGATTCCTGCCAAGGTA | 60.054 | 47.826 | 0.00 | 0.00 | 44.82 | 3.08 |
4666 | 4742 | 3.458163 | GGTGATGTCGAGGGCCGA | 61.458 | 66.667 | 0.00 | 0.00 | 46.35 | 5.54 |
5076 | 5152 | 3.326006 | TGATGATCTAGGTCAGGCCATTC | 59.674 | 47.826 | 12.11 | 3.58 | 40.61 | 2.67 |
5645 | 5724 | 3.880047 | ATGCTGTTGGATCCATTGTTG | 57.120 | 42.857 | 17.06 | 5.87 | 0.00 | 3.33 |
5754 | 5833 | 1.233950 | TGCATGTTGCCGATGTCGTT | 61.234 | 50.000 | 1.44 | 0.00 | 44.23 | 3.85 |
5903 | 5982 | 9.056005 | GCCATCAAGTTGACATAGATATTTGTA | 57.944 | 33.333 | 7.96 | 0.00 | 0.00 | 2.41 |
5905 | 5984 | 7.013559 | TGGCCATCAAGTTGACATAGATATTTG | 59.986 | 37.037 | 7.96 | 0.00 | 0.00 | 2.32 |
5910 | 5989 | 4.508551 | TGGCCATCAAGTTGACATAGAT | 57.491 | 40.909 | 7.96 | 0.00 | 0.00 | 1.98 |
5929 | 6008 | 8.320295 | GCATTTCGTGTTTATGACAAATTATGG | 58.680 | 33.333 | 0.00 | 0.00 | 40.65 | 2.74 |
6600 | 6688 | 2.935481 | CAGACTGGGCCCCTCCAA | 60.935 | 66.667 | 22.27 | 0.00 | 36.21 | 3.53 |
6755 | 6844 | 6.184580 | CACATTAGTGCCGGTTTGTATTTA | 57.815 | 37.500 | 1.90 | 0.00 | 39.21 | 1.40 |
6818 | 6907 | 0.179070 | GAGCTAGAGGCCCTTTTCGG | 60.179 | 60.000 | 0.00 | 0.00 | 43.05 | 4.30 |
6819 | 6908 | 0.528684 | CGAGCTAGAGGCCCTTTTCG | 60.529 | 60.000 | 0.00 | 0.00 | 43.05 | 3.46 |
6850 | 6939 | 7.951530 | AAACTTTGTAATGAAAAGATGCCTG | 57.048 | 32.000 | 3.09 | 0.00 | 37.91 | 4.85 |
6983 | 7080 | 5.994250 | AGCTTTAGATCAACTATGCCTTCA | 58.006 | 37.500 | 0.00 | 0.00 | 34.16 | 3.02 |
7097 | 7194 | 5.707298 | ACCATTGTCTTCAATCTCGTGAAAT | 59.293 | 36.000 | 0.00 | 0.00 | 41.66 | 2.17 |
7127 | 7224 | 3.831323 | TGGGAACAAGAAGCTGATCAAA | 58.169 | 40.909 | 0.00 | 0.00 | 37.44 | 2.69 |
7158 | 7255 | 2.032528 | CTGCCGGTTTGCTGGAGA | 59.967 | 61.111 | 1.90 | 0.00 | 43.97 | 3.71 |
7224 | 7321 | 2.304761 | TGCCAGAGTTCTTACGGGAATT | 59.695 | 45.455 | 0.00 | 0.00 | 0.00 | 2.17 |
7532 | 7629 | 1.351350 | GTTGGAGGGTGCTTCCTTAGT | 59.649 | 52.381 | 0.18 | 0.00 | 37.25 | 2.24 |
7571 | 7668 | 3.054875 | TCACCATGAAGCTCTTATGTGCT | 60.055 | 43.478 | 0.00 | 0.00 | 43.83 | 4.40 |
7733 | 7830 | 3.136626 | AGAACTTGCCACCTACTTTGTCT | 59.863 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
7977 | 8078 | 9.140286 | GTACATATACACATATAGGTTGCAGTG | 57.860 | 37.037 | 0.00 | 0.00 | 38.76 | 3.66 |
8076 | 8177 | 6.380846 | ACATAATTGTGGGTACGGAACTACTA | 59.619 | 38.462 | 0.00 | 0.00 | 33.85 | 1.82 |
8264 | 8365 | 6.036517 | GCCATTTCAGTAGTGAATAGTGAGTG | 59.963 | 42.308 | 13.69 | 2.43 | 43.23 | 3.51 |
8291 | 8392 | 0.806102 | CAGGACGCACTACCAATCCG | 60.806 | 60.000 | 0.00 | 0.00 | 34.46 | 4.18 |
8329 | 8430 | 5.957842 | TTTTTGCACTCGGTTTATGAGAT | 57.042 | 34.783 | 0.00 | 0.00 | 36.93 | 2.75 |
8372 | 8473 | 1.896660 | GGCTTTGCCGAGTGTCCAA | 60.897 | 57.895 | 0.00 | 0.00 | 39.62 | 3.53 |
8433 | 8534 | 1.078143 | GCCTTTGCCGAGAGTCCAT | 60.078 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
8444 | 8545 | 1.933853 | CATACGTGTCTAGGCCTTTGC | 59.066 | 52.381 | 12.58 | 1.24 | 0.00 | 3.68 |
8445 | 8546 | 2.093658 | ACCATACGTGTCTAGGCCTTTG | 60.094 | 50.000 | 12.58 | 4.55 | 0.00 | 2.77 |
8446 | 8547 | 2.093658 | CACCATACGTGTCTAGGCCTTT | 60.094 | 50.000 | 12.58 | 0.00 | 37.73 | 3.11 |
8447 | 8548 | 1.480954 | CACCATACGTGTCTAGGCCTT | 59.519 | 52.381 | 12.58 | 0.00 | 37.73 | 4.35 |
8448 | 8549 | 1.112113 | CACCATACGTGTCTAGGCCT | 58.888 | 55.000 | 11.78 | 11.78 | 37.73 | 5.19 |
8449 | 8550 | 0.104304 | CCACCATACGTGTCTAGGCC | 59.896 | 60.000 | 0.00 | 0.00 | 41.26 | 5.19 |
8450 | 8551 | 0.529992 | GCCACCATACGTGTCTAGGC | 60.530 | 60.000 | 0.00 | 2.51 | 41.26 | 3.93 |
8451 | 8552 | 0.104304 | GGCCACCATACGTGTCTAGG | 59.896 | 60.000 | 0.00 | 0.00 | 41.26 | 3.02 |
8452 | 8553 | 1.112113 | AGGCCACCATACGTGTCTAG | 58.888 | 55.000 | 5.01 | 0.00 | 41.26 | 2.43 |
8453 | 8554 | 1.479323 | GAAGGCCACCATACGTGTCTA | 59.521 | 52.381 | 5.01 | 0.00 | 41.26 | 2.59 |
8454 | 8555 | 0.249398 | GAAGGCCACCATACGTGTCT | 59.751 | 55.000 | 5.01 | 0.00 | 41.26 | 3.41 |
8537 | 8638 | 4.989279 | AGAACTTGAAACATGCACACTT | 57.011 | 36.364 | 0.00 | 0.00 | 0.00 | 3.16 |
8545 | 8646 | 7.117667 | GTGGTTTTCAACAAGAACTTGAAACAT | 59.882 | 33.333 | 19.35 | 0.00 | 43.83 | 2.71 |
8546 | 8647 | 6.422400 | GTGGTTTTCAACAAGAACTTGAAACA | 59.578 | 34.615 | 19.35 | 9.73 | 43.83 | 2.83 |
8586 | 8687 | 7.621567 | CGTAAAATTCGCAAAACACAATAATCG | 59.378 | 33.333 | 0.00 | 0.00 | 0.00 | 3.34 |
8587 | 8688 | 8.631695 | TCGTAAAATTCGCAAAACACAATAATC | 58.368 | 29.630 | 0.00 | 0.00 | 0.00 | 1.75 |
8588 | 8689 | 8.508800 | TCGTAAAATTCGCAAAACACAATAAT | 57.491 | 26.923 | 0.00 | 0.00 | 0.00 | 1.28 |
8590 | 8691 | 7.096558 | GGTTCGTAAAATTCGCAAAACACAATA | 60.097 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
8591 | 8692 | 6.291902 | GGTTCGTAAAATTCGCAAAACACAAT | 60.292 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
8594 | 8695 | 4.499758 | TGGTTCGTAAAATTCGCAAAACAC | 59.500 | 37.500 | 0.00 | 0.00 | 0.00 | 3.32 |
8596 | 8697 | 5.623174 | TTGGTTCGTAAAATTCGCAAAAC | 57.377 | 34.783 | 0.00 | 0.00 | 0.00 | 2.43 |
8597 | 8698 | 6.034591 | TCTTTGGTTCGTAAAATTCGCAAAA | 58.965 | 32.000 | 0.00 | 0.00 | 0.00 | 2.44 |
8598 | 8699 | 5.579718 | TCTTTGGTTCGTAAAATTCGCAAA | 58.420 | 33.333 | 0.00 | 0.00 | 0.00 | 3.68 |
8599 | 8700 | 5.171147 | TCTTTGGTTCGTAAAATTCGCAA | 57.829 | 34.783 | 0.00 | 0.00 | 0.00 | 4.85 |
8601 | 8702 | 4.156182 | CCTCTTTGGTTCGTAAAATTCGC | 58.844 | 43.478 | 0.00 | 0.00 | 0.00 | 4.70 |
8602 | 8703 | 4.156182 | GCCTCTTTGGTTCGTAAAATTCG | 58.844 | 43.478 | 0.00 | 0.00 | 38.35 | 3.34 |
8603 | 8704 | 4.482386 | GGCCTCTTTGGTTCGTAAAATTC | 58.518 | 43.478 | 0.00 | 0.00 | 38.35 | 2.17 |
8604 | 8705 | 3.257375 | GGGCCTCTTTGGTTCGTAAAATT | 59.743 | 43.478 | 0.84 | 0.00 | 38.35 | 1.82 |
8605 | 8706 | 2.823747 | GGGCCTCTTTGGTTCGTAAAAT | 59.176 | 45.455 | 0.84 | 0.00 | 38.35 | 1.82 |
8607 | 8708 | 1.422402 | AGGGCCTCTTTGGTTCGTAAA | 59.578 | 47.619 | 0.00 | 0.00 | 38.35 | 2.01 |
8608 | 8709 | 1.061546 | AGGGCCTCTTTGGTTCGTAA | 58.938 | 50.000 | 0.00 | 0.00 | 38.35 | 3.18 |
8611 | 8712 | 1.668419 | CATAGGGCCTCTTTGGTTCG | 58.332 | 55.000 | 10.74 | 0.00 | 38.35 | 3.95 |
8612 | 8713 | 1.340991 | TGCATAGGGCCTCTTTGGTTC | 60.341 | 52.381 | 10.74 | 0.00 | 43.89 | 3.62 |
8613 | 8714 | 0.704076 | TGCATAGGGCCTCTTTGGTT | 59.296 | 50.000 | 10.74 | 0.00 | 43.89 | 3.67 |
8615 | 8716 | 1.325355 | CATGCATAGGGCCTCTTTGG | 58.675 | 55.000 | 10.74 | 0.00 | 43.89 | 3.28 |
8616 | 8717 | 0.672342 | GCATGCATAGGGCCTCTTTG | 59.328 | 55.000 | 10.74 | 8.10 | 43.89 | 2.77 |
8617 | 8718 | 0.468771 | GGCATGCATAGGGCCTCTTT | 60.469 | 55.000 | 21.36 | 0.00 | 44.32 | 2.52 |
8618 | 8719 | 1.152368 | GGCATGCATAGGGCCTCTT | 59.848 | 57.895 | 21.36 | 0.00 | 44.32 | 2.85 |
8619 | 8720 | 2.842058 | GGCATGCATAGGGCCTCT | 59.158 | 61.111 | 21.36 | 0.00 | 44.32 | 3.69 |
8623 | 8724 | 1.631405 | TAATTGGGCATGCATAGGGC | 58.369 | 50.000 | 21.36 | 0.00 | 45.13 | 5.19 |
8624 | 8725 | 6.407299 | GGAATAATAATTGGGCATGCATAGGG | 60.407 | 42.308 | 21.36 | 0.00 | 0.00 | 3.53 |
8625 | 8726 | 6.381994 | AGGAATAATAATTGGGCATGCATAGG | 59.618 | 38.462 | 21.36 | 0.00 | 0.00 | 2.57 |
8626 | 8727 | 7.414222 | AGGAATAATAATTGGGCATGCATAG | 57.586 | 36.000 | 21.36 | 0.00 | 0.00 | 2.23 |
8628 | 8729 | 6.691255 | AAGGAATAATAATTGGGCATGCAT | 57.309 | 33.333 | 21.36 | 0.85 | 0.00 | 3.96 |
8629 | 8730 | 6.552725 | TGTAAGGAATAATAATTGGGCATGCA | 59.447 | 34.615 | 21.36 | 0.00 | 0.00 | 3.96 |
8630 | 8731 | 6.991938 | TGTAAGGAATAATAATTGGGCATGC | 58.008 | 36.000 | 9.90 | 9.90 | 0.00 | 4.06 |
8631 | 8732 | 9.829507 | TTTTGTAAGGAATAATAATTGGGCATG | 57.170 | 29.630 | 0.00 | 0.00 | 0.00 | 4.06 |
8633 | 8734 | 9.883142 | CTTTTTGTAAGGAATAATAATTGGGCA | 57.117 | 29.630 | 0.00 | 0.00 | 0.00 | 5.36 |
8634 | 8735 | 9.325198 | CCTTTTTGTAAGGAATAATAATTGGGC | 57.675 | 33.333 | 0.00 | 0.00 | 39.81 | 5.36 |
8635 | 8736 | 9.830975 | CCCTTTTTGTAAGGAATAATAATTGGG | 57.169 | 33.333 | 5.15 | 0.00 | 39.81 | 4.12 |
8639 | 8740 | 8.410912 | GCGACCCTTTTTGTAAGGAATAATAAT | 58.589 | 33.333 | 5.15 | 0.00 | 39.81 | 1.28 |
8640 | 8741 | 7.612633 | AGCGACCCTTTTTGTAAGGAATAATAA | 59.387 | 33.333 | 5.15 | 0.00 | 39.81 | 1.40 |
8641 | 8742 | 7.066525 | CAGCGACCCTTTTTGTAAGGAATAATA | 59.933 | 37.037 | 5.15 | 0.00 | 39.81 | 0.98 |
8642 | 8743 | 5.949952 | AGCGACCCTTTTTGTAAGGAATAAT | 59.050 | 36.000 | 5.15 | 0.00 | 39.81 | 1.28 |
8643 | 8744 | 5.182380 | CAGCGACCCTTTTTGTAAGGAATAA | 59.818 | 40.000 | 5.15 | 0.00 | 39.81 | 1.40 |
8645 | 8746 | 3.506067 | CAGCGACCCTTTTTGTAAGGAAT | 59.494 | 43.478 | 5.15 | 0.00 | 39.81 | 3.01 |
8662 | 8802 | 4.991687 | TGTGTGTGTGTAAATAATCAGCGA | 59.008 | 37.500 | 0.00 | 0.00 | 0.00 | 4.93 |
8664 | 8804 | 5.851177 | GTGTGTGTGTGTGTAAATAATCAGC | 59.149 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
8686 | 8826 | 4.081476 | TCTCTCTCTCTCTCTCTCTGTGTG | 60.081 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
8687 | 8827 | 4.096681 | TCTCTCTCTCTCTCTCTCTGTGT | 58.903 | 47.826 | 0.00 | 0.00 | 0.00 | 3.72 |
8688 | 8828 | 4.403752 | TCTCTCTCTCTCTCTCTCTCTGTG | 59.596 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
8689 | 8829 | 4.614475 | TCTCTCTCTCTCTCTCTCTCTGT | 58.386 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
8690 | 8830 | 4.892345 | TCTCTCTCTCTCTCTCTCTCTCTG | 59.108 | 50.000 | 0.00 | 0.00 | 0.00 | 3.35 |
8718 | 8858 | 5.503194 | GCTTTGTTGTTGTTGTTGTTGTTGT | 60.503 | 36.000 | 0.00 | 0.00 | 0.00 | 3.32 |
8719 | 8859 | 4.903016 | GCTTTGTTGTTGTTGTTGTTGTTG | 59.097 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
8720 | 8860 | 4.024472 | GGCTTTGTTGTTGTTGTTGTTGTT | 60.024 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
8721 | 8861 | 3.496507 | GGCTTTGTTGTTGTTGTTGTTGT | 59.503 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
8722 | 8862 | 3.745458 | AGGCTTTGTTGTTGTTGTTGTTG | 59.255 | 39.130 | 0.00 | 0.00 | 0.00 | 3.33 |
8723 | 8863 | 4.001618 | AGGCTTTGTTGTTGTTGTTGTT | 57.998 | 36.364 | 0.00 | 0.00 | 0.00 | 2.83 |
8724 | 8864 | 3.676291 | AGGCTTTGTTGTTGTTGTTGT | 57.324 | 38.095 | 0.00 | 0.00 | 0.00 | 3.32 |
8725 | 8865 | 5.637387 | ACTAAAGGCTTTGTTGTTGTTGTTG | 59.363 | 36.000 | 22.32 | 0.00 | 0.00 | 3.33 |
8726 | 8866 | 5.789521 | ACTAAAGGCTTTGTTGTTGTTGTT | 58.210 | 33.333 | 22.32 | 0.00 | 0.00 | 2.83 |
8727 | 8867 | 5.400066 | ACTAAAGGCTTTGTTGTTGTTGT | 57.600 | 34.783 | 22.32 | 0.00 | 0.00 | 3.32 |
8728 | 8868 | 4.803613 | GGACTAAAGGCTTTGTTGTTGTTG | 59.196 | 41.667 | 22.32 | 0.00 | 0.00 | 3.33 |
8729 | 8869 | 4.142026 | GGGACTAAAGGCTTTGTTGTTGTT | 60.142 | 41.667 | 22.32 | 0.00 | 0.00 | 2.83 |
8730 | 8870 | 3.383505 | GGGACTAAAGGCTTTGTTGTTGT | 59.616 | 43.478 | 22.32 | 10.58 | 0.00 | 3.32 |
8731 | 8871 | 3.383185 | TGGGACTAAAGGCTTTGTTGTTG | 59.617 | 43.478 | 22.32 | 7.79 | 0.00 | 3.33 |
8732 | 8872 | 3.637769 | TGGGACTAAAGGCTTTGTTGTT | 58.362 | 40.909 | 22.32 | 1.84 | 0.00 | 2.83 |
8733 | 8873 | 3.306472 | TGGGACTAAAGGCTTTGTTGT | 57.694 | 42.857 | 22.32 | 16.69 | 0.00 | 3.32 |
8734 | 8874 | 4.142049 | TGTTTGGGACTAAAGGCTTTGTTG | 60.142 | 41.667 | 22.32 | 13.85 | 0.00 | 3.33 |
8735 | 8875 | 4.027437 | TGTTTGGGACTAAAGGCTTTGTT | 58.973 | 39.130 | 22.32 | 8.73 | 0.00 | 2.83 |
8736 | 8876 | 3.637769 | TGTTTGGGACTAAAGGCTTTGT | 58.362 | 40.909 | 22.32 | 16.86 | 0.00 | 2.83 |
8737 | 8877 | 4.099419 | ACTTGTTTGGGACTAAAGGCTTTG | 59.901 | 41.667 | 22.32 | 13.97 | 0.00 | 2.77 |
8738 | 8878 | 4.286707 | ACTTGTTTGGGACTAAAGGCTTT | 58.713 | 39.130 | 17.76 | 17.76 | 0.00 | 3.51 |
8739 | 8879 | 3.910989 | ACTTGTTTGGGACTAAAGGCTT | 58.089 | 40.909 | 0.00 | 0.00 | 0.00 | 4.35 |
8740 | 8880 | 3.595190 | ACTTGTTTGGGACTAAAGGCT | 57.405 | 42.857 | 0.00 | 0.00 | 0.00 | 4.58 |
8741 | 8881 | 3.977427 | CAACTTGTTTGGGACTAAAGGC | 58.023 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
8752 | 8892 | 1.995376 | AGCCTACCCCAACTTGTTTG | 58.005 | 50.000 | 0.00 | 0.00 | 34.63 | 2.93 |
8753 | 8893 | 2.983898 | TCTAGCCTACCCCAACTTGTTT | 59.016 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
8754 | 8894 | 2.572104 | CTCTAGCCTACCCCAACTTGTT | 59.428 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
8755 | 8895 | 2.188817 | CTCTAGCCTACCCCAACTTGT | 58.811 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
8756 | 8896 | 2.432510 | CTCTCTAGCCTACCCCAACTTG | 59.567 | 54.545 | 0.00 | 0.00 | 0.00 | 3.16 |
8757 | 8897 | 2.315155 | TCTCTCTAGCCTACCCCAACTT | 59.685 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
8758 | 8898 | 1.930914 | TCTCTCTAGCCTACCCCAACT | 59.069 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
8759 | 8899 | 2.091775 | TCTCTCTCTAGCCTACCCCAAC | 60.092 | 54.545 | 0.00 | 0.00 | 0.00 | 3.77 |
8760 | 8900 | 2.175931 | CTCTCTCTCTAGCCTACCCCAA | 59.824 | 54.545 | 0.00 | 0.00 | 0.00 | 4.12 |
8761 | 8901 | 1.777878 | CTCTCTCTCTAGCCTACCCCA | 59.222 | 57.143 | 0.00 | 0.00 | 0.00 | 4.96 |
8762 | 8902 | 2.039879 | CTCTCTCTCTCTAGCCTACCCC | 59.960 | 59.091 | 0.00 | 0.00 | 0.00 | 4.95 |
8763 | 8903 | 2.976882 | TCTCTCTCTCTCTAGCCTACCC | 59.023 | 54.545 | 0.00 | 0.00 | 0.00 | 3.69 |
8764 | 8904 | 3.901844 | TCTCTCTCTCTCTCTAGCCTACC | 59.098 | 52.174 | 0.00 | 0.00 | 0.00 | 3.18 |
8765 | 8905 | 4.833380 | TCTCTCTCTCTCTCTCTAGCCTAC | 59.167 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
8766 | 8906 | 5.074746 | TCTCTCTCTCTCTCTCTAGCCTA | 57.925 | 47.826 | 0.00 | 0.00 | 0.00 | 3.93 |
8767 | 8907 | 3.900601 | CTCTCTCTCTCTCTCTCTAGCCT | 59.099 | 52.174 | 0.00 | 0.00 | 0.00 | 4.58 |
8768 | 8908 | 3.898123 | TCTCTCTCTCTCTCTCTCTAGCC | 59.102 | 52.174 | 0.00 | 0.00 | 0.00 | 3.93 |
8769 | 8909 | 4.830046 | TCTCTCTCTCTCTCTCTCTCTAGC | 59.170 | 50.000 | 0.00 | 0.00 | 0.00 | 3.42 |
8770 | 8910 | 6.968263 | TTCTCTCTCTCTCTCTCTCTCTAG | 57.032 | 45.833 | 0.00 | 0.00 | 0.00 | 2.43 |
8771 | 8911 | 9.607333 | AATATTCTCTCTCTCTCTCTCTCTCTA | 57.393 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
8772 | 8912 | 8.503428 | AATATTCTCTCTCTCTCTCTCTCTCT | 57.497 | 38.462 | 0.00 | 0.00 | 0.00 | 3.10 |
8824 | 8964 | 4.216411 | TCTGGTTTGTATCTTAGGCCAC | 57.784 | 45.455 | 5.01 | 0.00 | 0.00 | 5.01 |
8825 | 8965 | 4.843728 | CTTCTGGTTTGTATCTTAGGCCA | 58.156 | 43.478 | 5.01 | 0.00 | 0.00 | 5.36 |
8826 | 8966 | 3.628032 | GCTTCTGGTTTGTATCTTAGGCC | 59.372 | 47.826 | 0.00 | 0.00 | 0.00 | 5.19 |
8827 | 8967 | 3.309954 | CGCTTCTGGTTTGTATCTTAGGC | 59.690 | 47.826 | 0.00 | 0.00 | 0.00 | 3.93 |
8828 | 8968 | 4.755411 | TCGCTTCTGGTTTGTATCTTAGG | 58.245 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
8829 | 8969 | 4.806247 | CCTCGCTTCTGGTTTGTATCTTAG | 59.194 | 45.833 | 0.00 | 0.00 | 0.00 | 2.18 |
8830 | 8970 | 4.382685 | CCCTCGCTTCTGGTTTGTATCTTA | 60.383 | 45.833 | 0.00 | 0.00 | 0.00 | 2.10 |
8831 | 8971 | 3.600388 | CCTCGCTTCTGGTTTGTATCTT | 58.400 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
8832 | 8972 | 2.093447 | CCCTCGCTTCTGGTTTGTATCT | 60.093 | 50.000 | 0.00 | 0.00 | 0.00 | 1.98 |
8833 | 8973 | 2.093658 | TCCCTCGCTTCTGGTTTGTATC | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
8834 | 8974 | 1.906574 | TCCCTCGCTTCTGGTTTGTAT | 59.093 | 47.619 | 0.00 | 0.00 | 0.00 | 2.29 |
8844 | 8984 | 5.068067 | AGAGAAAATACTACTCCCTCGCTTC | 59.932 | 44.000 | 0.00 | 0.00 | 0.00 | 3.86 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.