Multiple sequence alignment - TraesCS5A01G002100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G002100 | chr5A | 100.000 | 4631 | 0 | 0 | 1 | 4631 | 1835926 | 1831296 | 0.000000e+00 | 8552.0 |
1 | TraesCS5A01G002100 | chr5A | 83.473 | 1313 | 131 | 44 | 1054 | 2323 | 1759544 | 1758275 | 0.000000e+00 | 1144.0 |
2 | TraesCS5A01G002100 | chr5A | 82.745 | 1304 | 136 | 53 | 1079 | 2321 | 1714360 | 1713085 | 0.000000e+00 | 1079.0 |
3 | TraesCS5A01G002100 | chr5A | 93.351 | 376 | 24 | 1 | 1978 | 2353 | 1803140 | 1802766 | 5.240000e-154 | 555.0 |
4 | TraesCS5A01G002100 | chr5A | 80.305 | 655 | 99 | 22 | 3539 | 4171 | 1750824 | 1750178 | 7.020000e-128 | 468.0 |
5 | TraesCS5A01G002100 | chr5A | 85.919 | 419 | 44 | 10 | 2606 | 3012 | 1757862 | 1757447 | 2.560000e-117 | 433.0 |
6 | TraesCS5A01G002100 | chr5A | 93.818 | 275 | 15 | 1 | 3019 | 3291 | 406990999 | 406991273 | 3.330000e-111 | 412.0 |
7 | TraesCS5A01G002100 | chr5A | 92.527 | 281 | 19 | 1 | 3017 | 3295 | 581492883 | 581492603 | 7.220000e-108 | 401.0 |
8 | TraesCS5A01G002100 | chr5A | 90.438 | 251 | 19 | 3 | 2613 | 2859 | 1802584 | 1802335 | 4.470000e-85 | 326.0 |
9 | TraesCS5A01G002100 | chr5A | 95.122 | 205 | 10 | 0 | 4427 | 4631 | 1798260 | 1798056 | 1.610000e-84 | 324.0 |
10 | TraesCS5A01G002100 | chr5A | 85.938 | 256 | 18 | 12 | 1079 | 1319 | 1336401 | 1336653 | 1.650000e-64 | 257.0 |
11 | TraesCS5A01G002100 | chr5A | 90.000 | 200 | 19 | 1 | 319 | 518 | 1803409 | 1803211 | 1.650000e-64 | 257.0 |
12 | TraesCS5A01G002100 | chr5A | 88.235 | 204 | 24 | 0 | 4427 | 4630 | 1750022 | 1749819 | 1.290000e-60 | 244.0 |
13 | TraesCS5A01G002100 | chr5A | 87.097 | 186 | 13 | 3 | 319 | 498 | 1760179 | 1759999 | 2.830000e-47 | 200.0 |
14 | TraesCS5A01G002100 | chr5A | 94.017 | 117 | 7 | 0 | 4309 | 4425 | 1798433 | 1798317 | 1.320000e-40 | 178.0 |
15 | TraesCS5A01G002100 | chr5A | 89.286 | 112 | 12 | 0 | 4315 | 4426 | 1906428 | 1906317 | 1.740000e-29 | 141.0 |
16 | TraesCS5A01G002100 | chr5A | 91.489 | 94 | 6 | 1 | 2351 | 2442 | 1802685 | 1802592 | 1.350000e-25 | 128.0 |
17 | TraesCS5A01G002100 | chr5A | 87.387 | 111 | 9 | 3 | 4430 | 4540 | 1906258 | 1906153 | 6.290000e-24 | 122.0 |
18 | TraesCS5A01G002100 | chr5A | 85.859 | 99 | 14 | 0 | 3305 | 3403 | 1752483 | 1752385 | 6.340000e-19 | 106.0 |
19 | TraesCS5A01G002100 | chr5A | 93.651 | 63 | 3 | 1 | 351 | 413 | 1714500 | 1714439 | 4.930000e-15 | 93.5 |
20 | TraesCS5A01G002100 | chr5A | 92.537 | 67 | 1 | 1 | 2377 | 2443 | 1757927 | 1757865 | 4.930000e-15 | 93.5 |
21 | TraesCS5A01G002100 | chr5A | 95.652 | 46 | 2 | 0 | 4379 | 4424 | 1906834 | 1906789 | 1.790000e-09 | 75.0 |
22 | TraesCS5A01G002100 | chr5B | 89.388 | 2384 | 174 | 35 | 45 | 2408 | 2804575 | 2806899 | 0.000000e+00 | 2928.0 |
23 | TraesCS5A01G002100 | chr5B | 82.108 | 1442 | 162 | 57 | 931 | 2321 | 2883416 | 2884812 | 0.000000e+00 | 1146.0 |
24 | TraesCS5A01G002100 | chr5B | 81.005 | 1532 | 168 | 63 | 962 | 2442 | 2614438 | 2612979 | 0.000000e+00 | 1103.0 |
25 | TraesCS5A01G002100 | chr5B | 89.770 | 479 | 36 | 7 | 3704 | 4171 | 2810308 | 2810784 | 6.630000e-168 | 601.0 |
26 | TraesCS5A01G002100 | chr5B | 81.239 | 565 | 74 | 15 | 3564 | 4097 | 2611075 | 2610512 | 1.190000e-115 | 427.0 |
27 | TraesCS5A01G002100 | chr5B | 93.091 | 275 | 17 | 1 | 3019 | 3291 | 274471270 | 274471544 | 7.220000e-108 | 401.0 |
28 | TraesCS5A01G002100 | chr5B | 96.809 | 188 | 6 | 0 | 4427 | 4614 | 2810945 | 2811132 | 9.670000e-82 | 315.0 |
29 | TraesCS5A01G002100 | chr5B | 87.546 | 273 | 31 | 3 | 3416 | 3686 | 2810051 | 2810322 | 3.480000e-81 | 313.0 |
30 | TraesCS5A01G002100 | chr5B | 89.344 | 244 | 21 | 3 | 2779 | 3019 | 2612788 | 2612547 | 7.530000e-78 | 302.0 |
31 | TraesCS5A01G002100 | chr5B | 88.614 | 202 | 21 | 1 | 4429 | 4630 | 2610297 | 2610098 | 1.290000e-60 | 244.0 |
32 | TraesCS5A01G002100 | chr5B | 96.610 | 118 | 4 | 0 | 4309 | 4426 | 2810772 | 2810889 | 3.660000e-46 | 196.0 |
33 | TraesCS5A01G002100 | chr5B | 84.536 | 97 | 5 | 5 | 2734 | 2820 | 2806916 | 2807012 | 2.300000e-13 | 87.9 |
34 | TraesCS5A01G002100 | chr5D | 91.114 | 1463 | 90 | 16 | 897 | 2353 | 2797125 | 2798553 | 0.000000e+00 | 1945.0 |
35 | TraesCS5A01G002100 | chr5D | 83.475 | 1416 | 148 | 43 | 1079 | 2442 | 3012517 | 3013898 | 0.000000e+00 | 1240.0 |
36 | TraesCS5A01G002100 | chr5D | 82.974 | 1439 | 151 | 52 | 931 | 2321 | 3070466 | 3071858 | 0.000000e+00 | 1214.0 |
37 | TraesCS5A01G002100 | chr5D | 88.716 | 771 | 70 | 10 | 3416 | 4171 | 2843686 | 2844454 | 0.000000e+00 | 926.0 |
38 | TraesCS5A01G002100 | chr5D | 91.132 | 530 | 27 | 7 | 52 | 581 | 2796562 | 2797071 | 0.000000e+00 | 701.0 |
39 | TraesCS5A01G002100 | chr5D | 92.000 | 350 | 24 | 2 | 2674 | 3019 | 2798621 | 2798970 | 5.390000e-134 | 488.0 |
40 | TraesCS5A01G002100 | chr5D | 92.683 | 205 | 15 | 0 | 4427 | 4631 | 2844615 | 2844819 | 3.500000e-76 | 296.0 |
41 | TraesCS5A01G002100 | chr5D | 89.604 | 202 | 19 | 1 | 4429 | 4630 | 3033391 | 3033590 | 5.950000e-64 | 255.0 |
42 | TraesCS5A01G002100 | chr5D | 79.480 | 346 | 61 | 9 | 523 | 860 | 496697448 | 496697791 | 2.150000e-58 | 237.0 |
43 | TraesCS5A01G002100 | chr5D | 90.805 | 174 | 14 | 2 | 639 | 810 | 3237745 | 3237918 | 1.000000e-56 | 231.0 |
44 | TraesCS5A01G002100 | chr5D | 88.021 | 192 | 15 | 6 | 2426 | 2616 | 32496840 | 32497024 | 2.170000e-53 | 220.0 |
45 | TraesCS5A01G002100 | chr5D | 89.011 | 182 | 11 | 6 | 2431 | 2610 | 66671956 | 66671782 | 2.810000e-52 | 217.0 |
46 | TraesCS5A01G002100 | chr5D | 88.398 | 181 | 18 | 1 | 316 | 496 | 3070226 | 3070403 | 1.010000e-51 | 215.0 |
47 | TraesCS5A01G002100 | chr5D | 90.141 | 142 | 14 | 0 | 4165 | 4306 | 370635441 | 370635300 | 7.910000e-43 | 185.0 |
48 | TraesCS5A01G002100 | chr5D | 94.872 | 117 | 6 | 0 | 4309 | 4425 | 2844442 | 2844558 | 2.850000e-42 | 183.0 |
49 | TraesCS5A01G002100 | chr5D | 88.793 | 116 | 9 | 2 | 4309 | 4424 | 3033221 | 3033332 | 6.250000e-29 | 139.0 |
50 | TraesCS5A01G002100 | chr5D | 84.545 | 110 | 17 | 0 | 4315 | 4424 | 2750336 | 2750445 | 4.900000e-20 | 110.0 |
51 | TraesCS5A01G002100 | chr5D | 100.000 | 40 | 0 | 0 | 2403 | 2442 | 2798566 | 2798605 | 1.790000e-09 | 75.0 |
52 | TraesCS5A01G002100 | chr1D | 93.333 | 285 | 17 | 1 | 3017 | 3299 | 396411369 | 396411653 | 1.990000e-113 | 420.0 |
53 | TraesCS5A01G002100 | chr1D | 90.000 | 170 | 10 | 4 | 2440 | 2607 | 74927419 | 74927255 | 3.630000e-51 | 213.0 |
54 | TraesCS5A01G002100 | chr1D | 92.254 | 142 | 10 | 1 | 4165 | 4305 | 74389210 | 74389351 | 2.830000e-47 | 200.0 |
55 | TraesCS5A01G002100 | chr1D | 90.977 | 133 | 12 | 0 | 4173 | 4305 | 360845626 | 360845494 | 3.680000e-41 | 180.0 |
56 | TraesCS5A01G002100 | chr1D | 88.356 | 146 | 15 | 2 | 4168 | 4312 | 386168303 | 386168159 | 1.710000e-39 | 174.0 |
57 | TraesCS5A01G002100 | chr1D | 87.943 | 141 | 15 | 2 | 4167 | 4306 | 81365492 | 81365631 | 1.030000e-36 | 165.0 |
58 | TraesCS5A01G002100 | chr2A | 93.165 | 278 | 17 | 1 | 3016 | 3291 | 398656745 | 398657022 | 1.550000e-109 | 407.0 |
59 | TraesCS5A01G002100 | chr2A | 79.179 | 341 | 55 | 11 | 526 | 853 | 660267931 | 660268268 | 6.030000e-54 | 222.0 |
60 | TraesCS5A01G002100 | chr3B | 93.141 | 277 | 17 | 1 | 3017 | 3291 | 296024580 | 296024304 | 5.580000e-109 | 405.0 |
61 | TraesCS5A01G002100 | chr3B | 90.058 | 171 | 12 | 3 | 2440 | 2609 | 775481568 | 775481734 | 2.810000e-52 | 217.0 |
62 | TraesCS5A01G002100 | chr3B | 92.143 | 140 | 9 | 1 | 4165 | 4304 | 599090526 | 599090663 | 3.660000e-46 | 196.0 |
63 | TraesCS5A01G002100 | chr4B | 93.091 | 275 | 17 | 1 | 3019 | 3291 | 30668055 | 30668329 | 7.220000e-108 | 401.0 |
64 | TraesCS5A01G002100 | chr4B | 89.595 | 173 | 13 | 3 | 2436 | 2607 | 512755416 | 512755248 | 1.010000e-51 | 215.0 |
65 | TraesCS5A01G002100 | chr4B | 92.029 | 138 | 10 | 1 | 4167 | 4304 | 667287855 | 667287991 | 4.730000e-45 | 193.0 |
66 | TraesCS5A01G002100 | chr4B | 89.928 | 139 | 13 | 1 | 4167 | 4305 | 667265424 | 667265561 | 1.320000e-40 | 178.0 |
67 | TraesCS5A01G002100 | chr4B | 89.928 | 139 | 10 | 4 | 4168 | 4306 | 72172885 | 72173019 | 4.760000e-40 | 176.0 |
68 | TraesCS5A01G002100 | chr4B | 88.194 | 144 | 14 | 2 | 4165 | 4307 | 147067937 | 147067796 | 7.970000e-38 | 169.0 |
69 | TraesCS5A01G002100 | chr4B | 90.909 | 44 | 4 | 0 | 1537 | 1580 | 29674203 | 29674160 | 5.000000e-05 | 60.2 |
70 | TraesCS5A01G002100 | chr3D | 92.014 | 288 | 20 | 2 | 3017 | 3302 | 387275315 | 387275029 | 7.220000e-108 | 401.0 |
71 | TraesCS5A01G002100 | chr3D | 89.855 | 138 | 13 | 1 | 4178 | 4315 | 538703037 | 538702901 | 4.760000e-40 | 176.0 |
72 | TraesCS5A01G002100 | chr3D | 87.838 | 148 | 13 | 4 | 4167 | 4313 | 578207712 | 578207569 | 7.970000e-38 | 169.0 |
73 | TraesCS5A01G002100 | chr1A | 93.091 | 275 | 17 | 1 | 3019 | 3291 | 312241203 | 312241477 | 7.220000e-108 | 401.0 |
74 | TraesCS5A01G002100 | chr1A | 88.652 | 141 | 15 | 1 | 4167 | 4307 | 24436947 | 24436808 | 2.220000e-38 | 171.0 |
75 | TraesCS5A01G002100 | chr7D | 83.284 | 335 | 47 | 9 | 523 | 854 | 603730875 | 603731203 | 2.710000e-77 | 300.0 |
76 | TraesCS5A01G002100 | chr7D | 94.286 | 140 | 6 | 1 | 4167 | 4306 | 198028716 | 198028853 | 3.630000e-51 | 213.0 |
77 | TraesCS5A01G002100 | chr7D | 91.971 | 137 | 10 | 1 | 4167 | 4303 | 20910444 | 20910579 | 1.700000e-44 | 191.0 |
78 | TraesCS5A01G002100 | chr2B | 85.159 | 283 | 37 | 5 | 526 | 804 | 5810796 | 5810515 | 7.580000e-73 | 285.0 |
79 | TraesCS5A01G002100 | chr2B | 84.375 | 288 | 38 | 7 | 523 | 806 | 5964873 | 5965157 | 4.560000e-70 | 276.0 |
80 | TraesCS5A01G002100 | chr2B | 83.333 | 72 | 6 | 5 | 2578 | 2646 | 30146024 | 30145956 | 1.390000e-05 | 62.1 |
81 | TraesCS5A01G002100 | chr3A | 81.105 | 344 | 45 | 14 | 523 | 860 | 66217855 | 66218184 | 1.650000e-64 | 257.0 |
82 | TraesCS5A01G002100 | chr1B | 95.070 | 142 | 7 | 0 | 4165 | 4306 | 686409607 | 686409466 | 1.680000e-54 | 224.0 |
83 | TraesCS5A01G002100 | chr1B | 95.070 | 142 | 7 | 0 | 4165 | 4306 | 686436444 | 686436303 | 1.680000e-54 | 224.0 |
84 | TraesCS5A01G002100 | chr1B | 95.035 | 141 | 7 | 0 | 4165 | 4305 | 686146426 | 686146286 | 6.030000e-54 | 222.0 |
85 | TraesCS5A01G002100 | chr1B | 89.080 | 174 | 14 | 4 | 2439 | 2611 | 427602942 | 427603111 | 1.310000e-50 | 211.0 |
86 | TraesCS5A01G002100 | chr1B | 90.909 | 143 | 11 | 1 | 4165 | 4307 | 685983308 | 685983168 | 1.700000e-44 | 191.0 |
87 | TraesCS5A01G002100 | chrUn | 88.827 | 179 | 15 | 3 | 2437 | 2614 | 74119618 | 74119444 | 1.010000e-51 | 215.0 |
88 | TraesCS5A01G002100 | chrUn | 83.117 | 231 | 25 | 8 | 624 | 853 | 16200568 | 16200785 | 1.020000e-46 | 198.0 |
89 | TraesCS5A01G002100 | chrUn | 88.489 | 139 | 15 | 1 | 4167 | 4305 | 79707170 | 79707307 | 2.870000e-37 | 167.0 |
90 | TraesCS5A01G002100 | chrUn | 87.234 | 141 | 16 | 2 | 4167 | 4307 | 294461590 | 294461452 | 4.800000e-35 | 159.0 |
91 | TraesCS5A01G002100 | chrUn | 89.916 | 119 | 9 | 3 | 4186 | 4303 | 382908995 | 382908879 | 2.890000e-32 | 150.0 |
92 | TraesCS5A01G002100 | chrUn | 90.291 | 103 | 7 | 2 | 4204 | 4305 | 269227162 | 269227262 | 1.050000e-26 | 132.0 |
93 | TraesCS5A01G002100 | chrUn | 86.066 | 122 | 10 | 5 | 4186 | 4307 | 68791091 | 68791205 | 1.750000e-24 | 124.0 |
94 | TraesCS5A01G002100 | chrUn | 93.902 | 82 | 2 | 2 | 4225 | 4306 | 109126507 | 109126585 | 2.260000e-23 | 121.0 |
95 | TraesCS5A01G002100 | chr2D | 89.595 | 173 | 12 | 4 | 2440 | 2611 | 620389400 | 620389233 | 1.010000e-51 | 215.0 |
96 | TraesCS5A01G002100 | chr2D | 92.481 | 133 | 10 | 0 | 4173 | 4305 | 266899405 | 266899537 | 1.700000e-44 | 191.0 |
97 | TraesCS5A01G002100 | chr4D | 88.333 | 180 | 16 | 3 | 2440 | 2618 | 190480243 | 190480418 | 1.310000e-50 | 211.0 |
98 | TraesCS5A01G002100 | chr4D | 87.943 | 141 | 15 | 2 | 4168 | 4308 | 63108302 | 63108164 | 1.030000e-36 | 165.0 |
99 | TraesCS5A01G002100 | chr4D | 87.943 | 141 | 16 | 1 | 4168 | 4308 | 502975768 | 502975907 | 1.030000e-36 | 165.0 |
100 | TraesCS5A01G002100 | chr4D | 87.143 | 140 | 15 | 2 | 4168 | 4306 | 98023377 | 98023514 | 6.200000e-34 | 156.0 |
101 | TraesCS5A01G002100 | chr4D | 88.889 | 126 | 13 | 1 | 4178 | 4303 | 14431844 | 14431720 | 2.230000e-33 | 154.0 |
102 | TraesCS5A01G002100 | chr4D | 86.154 | 130 | 12 | 4 | 4179 | 4308 | 20483757 | 20483880 | 8.080000e-28 | 135.0 |
103 | TraesCS5A01G002100 | chr4D | 85.950 | 121 | 15 | 2 | 4186 | 4305 | 32937798 | 32937917 | 1.350000e-25 | 128.0 |
104 | TraesCS5A01G002100 | chr7A | 78.498 | 293 | 49 | 10 | 569 | 854 | 696408921 | 696409206 | 3.680000e-41 | 180.0 |
105 | TraesCS5A01G002100 | chr6D | 88.112 | 143 | 14 | 3 | 4163 | 4305 | 60226708 | 60226569 | 2.870000e-37 | 167.0 |
106 | TraesCS5A01G002100 | chr6D | 89.922 | 129 | 12 | 1 | 4178 | 4306 | 139376994 | 139376867 | 1.030000e-36 | 165.0 |
107 | TraesCS5A01G002100 | chr6D | 87.324 | 142 | 15 | 3 | 4167 | 4306 | 333375889 | 333376029 | 4.800000e-35 | 159.0 |
108 | TraesCS5A01G002100 | chr6D | 89.062 | 128 | 12 | 2 | 4178 | 4305 | 440214649 | 440214524 | 1.720000e-34 | 158.0 |
109 | TraesCS5A01G002100 | chr6D | 86.525 | 141 | 15 | 3 | 4169 | 4308 | 436667426 | 436667289 | 8.030000e-33 | 152.0 |
110 | TraesCS5A01G002100 | chr4A | 85.185 | 108 | 14 | 2 | 2189 | 2295 | 583162401 | 583162295 | 4.900000e-20 | 110.0 |
111 | TraesCS5A01G002100 | chr4A | 74.595 | 185 | 33 | 8 | 1537 | 1720 | 583163119 | 583162948 | 8.310000e-08 | 69.4 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G002100 | chr5A | 1831296 | 1835926 | 4630 | True | 8552.000000 | 8552 | 100.000000 | 1 | 4631 | 1 | chr5A.!!$R1 | 4630 |
1 | TraesCS5A01G002100 | chr5A | 1713085 | 1714500 | 1415 | True | 586.250000 | 1079 | 88.198000 | 351 | 2321 | 2 | chr5A.!!$R3 | 1970 |
2 | TraesCS5A01G002100 | chr5A | 1757447 | 1760179 | 2732 | True | 467.625000 | 1144 | 87.256500 | 319 | 3012 | 4 | chr5A.!!$R5 | 2693 |
3 | TraesCS5A01G002100 | chr5A | 1798056 | 1803409 | 5353 | True | 294.666667 | 555 | 92.402833 | 319 | 4631 | 6 | chr5A.!!$R6 | 4312 |
4 | TraesCS5A01G002100 | chr5A | 1749819 | 1752483 | 2664 | True | 272.666667 | 468 | 84.799667 | 3305 | 4630 | 3 | chr5A.!!$R4 | 1325 |
5 | TraesCS5A01G002100 | chr5B | 2883416 | 2884812 | 1396 | False | 1146.000000 | 1146 | 82.108000 | 931 | 2321 | 1 | chr5B.!!$F1 | 1390 |
6 | TraesCS5A01G002100 | chr5B | 2804575 | 2811132 | 6557 | False | 740.150000 | 2928 | 90.776500 | 45 | 4614 | 6 | chr5B.!!$F3 | 4569 |
7 | TraesCS5A01G002100 | chr5B | 2610098 | 2614438 | 4340 | True | 519.000000 | 1103 | 85.050500 | 962 | 4630 | 4 | chr5B.!!$R1 | 3668 |
8 | TraesCS5A01G002100 | chr5D | 3012517 | 3013898 | 1381 | False | 1240.000000 | 1240 | 83.475000 | 1079 | 2442 | 1 | chr5D.!!$F2 | 1363 |
9 | TraesCS5A01G002100 | chr5D | 2796562 | 2798970 | 2408 | False | 802.250000 | 1945 | 93.561500 | 52 | 3019 | 4 | chr5D.!!$F6 | 2967 |
10 | TraesCS5A01G002100 | chr5D | 3070226 | 3071858 | 1632 | False | 714.500000 | 1214 | 85.686000 | 316 | 2321 | 2 | chr5D.!!$F9 | 2005 |
11 | TraesCS5A01G002100 | chr5D | 2843686 | 2844819 | 1133 | False | 468.333333 | 926 | 92.090333 | 3416 | 4631 | 3 | chr5D.!!$F7 | 1215 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
435 | 443 | 0.257039 | GCTGTCCCCCATTGACATCT | 59.743 | 55.0 | 0.0 | 0.0 | 41.58 | 2.90 | F |
1802 | 2353 | 0.588252 | CAACAGCCAGACCAAGAACG | 59.412 | 55.0 | 0.0 | 0.0 | 0.00 | 3.95 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1855 | 2427 | 0.033991 | TCGTCCTCCTCCTTCTCCAG | 60.034 | 60.0 | 0.00 | 0.00 | 0.00 | 3.86 | R |
3770 | 8678 | 0.390492 | TACATGCATGAGGAGAGCCG | 59.610 | 55.0 | 32.75 | 2.55 | 39.96 | 5.52 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
22 | 23 | 1.835494 | TCACGGACAGAGGAAGTAGG | 58.165 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
23 | 24 | 1.075050 | TCACGGACAGAGGAAGTAGGT | 59.925 | 52.381 | 0.00 | 0.00 | 0.00 | 3.08 |
24 | 25 | 2.306805 | TCACGGACAGAGGAAGTAGGTA | 59.693 | 50.000 | 0.00 | 0.00 | 0.00 | 3.08 |
25 | 26 | 2.683867 | CACGGACAGAGGAAGTAGGTAG | 59.316 | 54.545 | 0.00 | 0.00 | 0.00 | 3.18 |
26 | 27 | 2.308275 | ACGGACAGAGGAAGTAGGTAGT | 59.692 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
27 | 28 | 3.521126 | ACGGACAGAGGAAGTAGGTAGTA | 59.479 | 47.826 | 0.00 | 0.00 | 0.00 | 1.82 |
28 | 29 | 3.876320 | CGGACAGAGGAAGTAGGTAGTAC | 59.124 | 52.174 | 0.00 | 0.00 | 0.00 | 2.73 |
29 | 30 | 4.383989 | CGGACAGAGGAAGTAGGTAGTACT | 60.384 | 50.000 | 0.00 | 0.00 | 44.51 | 2.73 |
90 | 91 | 6.983307 | GCAAATGGGCATATATTGTGTGTTAA | 59.017 | 34.615 | 0.00 | 0.00 | 0.00 | 2.01 |
94 | 95 | 7.946381 | TGGGCATATATTGTGTGTTAAAAGA | 57.054 | 32.000 | 0.00 | 0.00 | 0.00 | 2.52 |
95 | 96 | 7.995289 | TGGGCATATATTGTGTGTTAAAAGAG | 58.005 | 34.615 | 0.00 | 0.00 | 0.00 | 2.85 |
96 | 97 | 7.613801 | TGGGCATATATTGTGTGTTAAAAGAGT | 59.386 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
131 | 132 | 8.357402 | AGTATTAATTCCCTCAACAACAACAAC | 58.643 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
134 | 135 | 3.859411 | TCCCTCAACAACAACAACAAC | 57.141 | 42.857 | 0.00 | 0.00 | 0.00 | 3.32 |
135 | 136 | 3.157881 | TCCCTCAACAACAACAACAACA | 58.842 | 40.909 | 0.00 | 0.00 | 0.00 | 3.33 |
136 | 137 | 3.574396 | TCCCTCAACAACAACAACAACAA | 59.426 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
137 | 138 | 3.677596 | CCCTCAACAACAACAACAACAAC | 59.322 | 43.478 | 0.00 | 0.00 | 0.00 | 3.32 |
138 | 139 | 4.302455 | CCTCAACAACAACAACAACAACA | 58.698 | 39.130 | 0.00 | 0.00 | 0.00 | 3.33 |
139 | 140 | 4.747108 | CCTCAACAACAACAACAACAACAA | 59.253 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
140 | 141 | 5.332959 | CCTCAACAACAACAACAACAACAAC | 60.333 | 40.000 | 0.00 | 0.00 | 0.00 | 3.32 |
141 | 142 | 5.109210 | TCAACAACAACAACAACAACAACA | 58.891 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
142 | 143 | 5.580691 | TCAACAACAACAACAACAACAACAA | 59.419 | 32.000 | 0.00 | 0.00 | 0.00 | 2.83 |
143 | 144 | 5.396750 | ACAACAACAACAACAACAACAAC | 57.603 | 34.783 | 0.00 | 0.00 | 0.00 | 3.32 |
144 | 145 | 4.870426 | ACAACAACAACAACAACAACAACA | 59.130 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
145 | 146 | 5.351465 | ACAACAACAACAACAACAACAACAA | 59.649 | 32.000 | 0.00 | 0.00 | 0.00 | 2.83 |
146 | 147 | 5.396750 | ACAACAACAACAACAACAACAAC | 57.603 | 34.783 | 0.00 | 0.00 | 0.00 | 3.32 |
147 | 148 | 4.870426 | ACAACAACAACAACAACAACAACA | 59.130 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
148 | 149 | 5.351465 | ACAACAACAACAACAACAACAACAA | 59.649 | 32.000 | 0.00 | 0.00 | 0.00 | 2.83 |
149 | 150 | 6.128282 | ACAACAACAACAACAACAACAACAAA | 60.128 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
150 | 151 | 6.422776 | ACAACAACAACAACAACAACAAAA | 57.577 | 29.167 | 0.00 | 0.00 | 0.00 | 2.44 |
237 | 239 | 7.880160 | AAGTGCATATTATTTCTAGTTGCCA | 57.120 | 32.000 | 0.00 | 0.00 | 0.00 | 4.92 |
258 | 260 | 5.681695 | GCCAGAAAGTAGTATGTAGGTGACC | 60.682 | 48.000 | 0.00 | 0.00 | 0.00 | 4.02 |
305 | 307 | 6.151691 | TGATGCTTGTTAGAAGAACAATTGC | 58.848 | 36.000 | 5.05 | 5.63 | 39.16 | 3.56 |
349 | 352 | 5.573337 | AGCCTGAATTTTCAAGATGCTAC | 57.427 | 39.130 | 0.00 | 0.00 | 36.64 | 3.58 |
435 | 443 | 0.257039 | GCTGTCCCCCATTGACATCT | 59.743 | 55.000 | 0.00 | 0.00 | 41.58 | 2.90 |
524 | 532 | 5.150683 | GTTTTGCAAACATACTACATCGCA | 58.849 | 37.500 | 12.39 | 0.00 | 0.00 | 5.10 |
561 | 569 | 2.867429 | CATTTGCTTCCGGATGAACAC | 58.133 | 47.619 | 20.87 | 3.84 | 0.00 | 3.32 |
576 | 584 | 6.202954 | CGGATGAACACTAACTCAAAAGAAGT | 59.797 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
581 | 589 | 7.279313 | TGAACACTAACTCAAAAGAAGTGGTAC | 59.721 | 37.037 | 5.83 | 0.00 | 38.89 | 3.34 |
582 | 590 | 5.751990 | ACACTAACTCAAAAGAAGTGGTACG | 59.248 | 40.000 | 5.83 | 0.00 | 40.86 | 3.67 |
585 | 593 | 5.924475 | AACTCAAAAGAAGTGGTACGATG | 57.076 | 39.130 | 0.00 | 0.00 | 0.00 | 3.84 |
586 | 594 | 3.746492 | ACTCAAAAGAAGTGGTACGATGC | 59.254 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
593 | 601 | 3.997021 | AGAAGTGGTACGATGCTTTCAAG | 59.003 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
603 | 611 | 6.317789 | ACGATGCTTTCAAGAAATTCTGAA | 57.682 | 33.333 | 0.00 | 0.34 | 0.00 | 3.02 |
633 | 641 | 3.487942 | TGTGAATGTTCGTGTTAGTGTCG | 59.512 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
637 | 645 | 2.269172 | TGTTCGTGTTAGTGTCGCAAA | 58.731 | 42.857 | 0.00 | 0.00 | 0.00 | 3.68 |
647 | 655 | 1.881973 | AGTGTCGCAAACATGCTTGAT | 59.118 | 42.857 | 12.98 | 0.00 | 40.80 | 2.57 |
656 | 664 | 6.308524 | TCGCAAACATGCTTGATAATTTTCAG | 59.691 | 34.615 | 12.98 | 0.00 | 0.00 | 3.02 |
674 | 682 | 1.068472 | CAGACGAAACGGAGCAGTAGT | 60.068 | 52.381 | 0.00 | 0.00 | 0.00 | 2.73 |
680 | 688 | 1.779569 | AACGGAGCAGTAGTGTTTCG | 58.220 | 50.000 | 13.03 | 13.03 | 41.48 | 3.46 |
691 | 699 | 5.446741 | GCAGTAGTGTTTCGTCAGTGAAAAA | 60.447 | 40.000 | 0.00 | 0.00 | 39.40 | 1.94 |
715 | 723 | 5.814481 | ACAAATTTGGGATAACATTTGGGG | 58.186 | 37.500 | 21.74 | 0.00 | 39.79 | 4.96 |
718 | 726 | 6.461577 | AATTTGGGATAACATTTGGGGTTT | 57.538 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
720 | 728 | 7.575499 | ATTTGGGATAACATTTGGGGTTTAA | 57.425 | 32.000 | 0.00 | 0.00 | 0.00 | 1.52 |
721 | 729 | 7.575499 | TTTGGGATAACATTTGGGGTTTAAT | 57.425 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
722 | 730 | 7.575499 | TTGGGATAACATTTGGGGTTTAATT | 57.425 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
723 | 731 | 7.575499 | TGGGATAACATTTGGGGTTTAATTT | 57.425 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
724 | 732 | 7.398024 | TGGGATAACATTTGGGGTTTAATTTG | 58.602 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
725 | 733 | 7.017651 | TGGGATAACATTTGGGGTTTAATTTGT | 59.982 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
726 | 734 | 7.885922 | GGGATAACATTTGGGGTTTAATTTGTT | 59.114 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
727 | 735 | 8.726068 | GGATAACATTTGGGGTTTAATTTGTTG | 58.274 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
728 | 736 | 9.278978 | GATAACATTTGGGGTTTAATTTGTTGT | 57.721 | 29.630 | 0.00 | 0.00 | 0.00 | 3.32 |
752 | 760 | 4.978083 | TTTTGCACATGCCAAAATGTTT | 57.022 | 31.818 | 16.47 | 0.00 | 38.75 | 2.83 |
754 | 762 | 6.441093 | TTTTGCACATGCCAAAATGTTTAA | 57.559 | 29.167 | 16.47 | 0.00 | 38.75 | 1.52 |
755 | 763 | 5.415415 | TTGCACATGCCAAAATGTTTAAC | 57.585 | 34.783 | 0.49 | 0.00 | 38.75 | 2.01 |
756 | 764 | 3.812053 | TGCACATGCCAAAATGTTTAACC | 59.188 | 39.130 | 0.49 | 0.00 | 38.75 | 2.85 |
802 | 810 | 7.661437 | GGTAGCATTTGGATGTGACTATGAATA | 59.339 | 37.037 | 0.00 | 0.00 | 35.63 | 1.75 |
876 | 884 | 2.001872 | CGCAAGCCAAATTGGATTTCC | 58.998 | 47.619 | 17.47 | 8.17 | 44.95 | 3.13 |
877 | 885 | 2.001872 | GCAAGCCAAATTGGATTTCCG | 58.998 | 47.619 | 17.47 | 5.33 | 44.95 | 4.30 |
878 | 886 | 2.353605 | GCAAGCCAAATTGGATTTCCGA | 60.354 | 45.455 | 17.47 | 0.00 | 44.95 | 4.55 |
879 | 887 | 3.253230 | CAAGCCAAATTGGATTTCCGAC | 58.747 | 45.455 | 17.47 | 0.00 | 44.95 | 4.79 |
921 | 931 | 5.639082 | ACTTGTTAAGCAGCCAAATAAATGC | 59.361 | 36.000 | 0.00 | 0.00 | 38.97 | 3.56 |
945 | 979 | 4.394729 | ACTTCTATTTGGACGGCTGAAAA | 58.605 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
947 | 981 | 3.343617 | TCTATTTGGACGGCTGAAAAGG | 58.656 | 45.455 | 0.00 | 0.00 | 0.00 | 3.11 |
948 | 982 | 2.286365 | ATTTGGACGGCTGAAAAGGA | 57.714 | 45.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1016 | 1358 | 0.736053 | CTCACTCACTCGCTACCTCC | 59.264 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1025 | 1367 | 2.032620 | CTCGCTACCTCCCTACACAAT | 58.967 | 52.381 | 0.00 | 0.00 | 0.00 | 2.71 |
1028 | 1370 | 2.116238 | GCTACCTCCCTACACAATCCA | 58.884 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
1049 | 1398 | 3.767902 | GCTAGGAAGCTTCATCTCCAT | 57.232 | 47.619 | 27.02 | 0.72 | 45.85 | 3.41 |
1100 | 1481 | 3.784701 | TCCGCTCTGATCTTTCTGTAC | 57.215 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
1146 | 1535 | 2.588596 | CATGTCATGCCGGCGCTA | 60.589 | 61.111 | 23.90 | 4.21 | 35.36 | 4.26 |
1341 | 1760 | 2.659016 | CTCAGCCTCTGCACCGAA | 59.341 | 61.111 | 0.00 | 0.00 | 41.13 | 4.30 |
1429 | 1851 | 3.680786 | CGTCGTCCCACCTGAGCA | 61.681 | 66.667 | 0.00 | 0.00 | 0.00 | 4.26 |
1470 | 1898 | 2.089980 | GACTCAGTGGCATTGCAAGAT | 58.910 | 47.619 | 11.39 | 0.00 | 0.00 | 2.40 |
1674 | 2126 | 3.961414 | GCCACGAAACCCCAGGGA | 61.961 | 66.667 | 7.25 | 0.00 | 38.96 | 4.20 |
1710 | 2162 | 4.344865 | GAGGGTGGCCGCCTCAAA | 62.345 | 66.667 | 33.66 | 0.00 | 31.77 | 2.69 |
1802 | 2353 | 0.588252 | CAACAGCCAGACCAAGAACG | 59.412 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
1809 | 2360 | 1.363744 | CAGACCAAGAACGGATGCTC | 58.636 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
1855 | 2427 | 4.166523 | TGTCGACGATGAAGAAGATGAAC | 58.833 | 43.478 | 11.62 | 0.00 | 0.00 | 3.18 |
1861 | 2439 | 4.464244 | ACGATGAAGAAGATGAACTGGAGA | 59.536 | 41.667 | 0.00 | 0.00 | 0.00 | 3.71 |
2329 | 2936 | 6.721318 | TGATCATTACTCCAAACTAGCCTTT | 58.279 | 36.000 | 0.00 | 0.00 | 0.00 | 3.11 |
2448 | 3437 | 9.752961 | GAGGTTGATTACTTAATTACTCTCTCC | 57.247 | 37.037 | 0.00 | 0.00 | 0.00 | 3.71 |
2449 | 3438 | 8.414778 | AGGTTGATTACTTAATTACTCTCTCCG | 58.585 | 37.037 | 0.00 | 0.00 | 0.00 | 4.63 |
2450 | 3439 | 8.196103 | GGTTGATTACTTAATTACTCTCTCCGT | 58.804 | 37.037 | 0.00 | 0.00 | 0.00 | 4.69 |
2451 | 3440 | 9.583765 | GTTGATTACTTAATTACTCTCTCCGTT | 57.416 | 33.333 | 0.00 | 0.00 | 0.00 | 4.44 |
2452 | 3441 | 9.798994 | TTGATTACTTAATTACTCTCTCCGTTC | 57.201 | 33.333 | 0.00 | 0.00 | 0.00 | 3.95 |
2453 | 3442 | 8.411683 | TGATTACTTAATTACTCTCTCCGTTCC | 58.588 | 37.037 | 0.00 | 0.00 | 0.00 | 3.62 |
2454 | 3443 | 7.951347 | TTACTTAATTACTCTCTCCGTTCCT | 57.049 | 36.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2455 | 3444 | 9.638176 | ATTACTTAATTACTCTCTCCGTTCCTA | 57.362 | 33.333 | 0.00 | 0.00 | 0.00 | 2.94 |
2456 | 3445 | 7.951347 | ACTTAATTACTCTCTCCGTTCCTAA | 57.049 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2457 | 3446 | 8.358582 | ACTTAATTACTCTCTCCGTTCCTAAA | 57.641 | 34.615 | 0.00 | 0.00 | 0.00 | 1.85 |
2458 | 3447 | 8.979534 | ACTTAATTACTCTCTCCGTTCCTAAAT | 58.020 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2463 | 3452 | 9.765795 | ATTACTCTCTCCGTTCCTAAATATTTG | 57.234 | 33.333 | 11.05 | 1.40 | 0.00 | 2.32 |
2464 | 3453 | 7.184067 | ACTCTCTCCGTTCCTAAATATTTGT | 57.816 | 36.000 | 11.05 | 0.00 | 0.00 | 2.83 |
2465 | 3454 | 7.266400 | ACTCTCTCCGTTCCTAAATATTTGTC | 58.734 | 38.462 | 11.05 | 0.00 | 0.00 | 3.18 |
2466 | 3455 | 7.124448 | ACTCTCTCCGTTCCTAAATATTTGTCT | 59.876 | 37.037 | 11.05 | 0.00 | 0.00 | 3.41 |
2467 | 3456 | 7.848128 | TCTCTCCGTTCCTAAATATTTGTCTT | 58.152 | 34.615 | 11.05 | 0.00 | 0.00 | 3.01 |
2468 | 3457 | 8.319146 | TCTCTCCGTTCCTAAATATTTGTCTTT | 58.681 | 33.333 | 11.05 | 0.00 | 0.00 | 2.52 |
2469 | 3458 | 8.488651 | TCTCCGTTCCTAAATATTTGTCTTTC | 57.511 | 34.615 | 11.05 | 0.00 | 0.00 | 2.62 |
2470 | 3459 | 8.319146 | TCTCCGTTCCTAAATATTTGTCTTTCT | 58.681 | 33.333 | 11.05 | 0.00 | 0.00 | 2.52 |
2471 | 3460 | 9.595823 | CTCCGTTCCTAAATATTTGTCTTTCTA | 57.404 | 33.333 | 11.05 | 0.00 | 0.00 | 2.10 |
2501 | 3490 | 7.878477 | ATTTCAACGAGTGACTAAATACGAA | 57.122 | 32.000 | 0.00 | 0.00 | 35.39 | 3.85 |
2502 | 3491 | 7.697352 | TTTCAACGAGTGACTAAATACGAAA | 57.303 | 32.000 | 0.00 | 0.00 | 35.39 | 3.46 |
2503 | 3492 | 6.922980 | TCAACGAGTGACTAAATACGAAAG | 57.077 | 37.500 | 0.00 | 0.00 | 0.00 | 2.62 |
2504 | 3493 | 6.671190 | TCAACGAGTGACTAAATACGAAAGA | 58.329 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2505 | 3494 | 7.140705 | TCAACGAGTGACTAAATACGAAAGAA | 58.859 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
2506 | 3495 | 7.648908 | TCAACGAGTGACTAAATACGAAAGAAA | 59.351 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
2507 | 3496 | 8.433126 | CAACGAGTGACTAAATACGAAAGAAAT | 58.567 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
2508 | 3497 | 7.950236 | ACGAGTGACTAAATACGAAAGAAATG | 58.050 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
2509 | 3498 | 7.811236 | ACGAGTGACTAAATACGAAAGAAATGA | 59.189 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2510 | 3499 | 8.314635 | CGAGTGACTAAATACGAAAGAAATGAG | 58.685 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
2511 | 3500 | 9.141400 | GAGTGACTAAATACGAAAGAAATGAGT | 57.859 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
2512 | 3501 | 8.926710 | AGTGACTAAATACGAAAGAAATGAGTG | 58.073 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
2513 | 3502 | 8.922676 | GTGACTAAATACGAAAGAAATGAGTGA | 58.077 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
2514 | 3503 | 9.483916 | TGACTAAATACGAAAGAAATGAGTGAA | 57.516 | 29.630 | 0.00 | 0.00 | 0.00 | 3.18 |
2520 | 3509 | 9.653287 | AATACGAAAGAAATGAGTGAATCTACA | 57.347 | 29.630 | 0.00 | 0.00 | 0.00 | 2.74 |
2521 | 3510 | 7.352719 | ACGAAAGAAATGAGTGAATCTACAC | 57.647 | 36.000 | 0.00 | 0.00 | 40.60 | 2.90 |
2568 | 3557 | 9.996554 | ATATTCGTATGTGATAGTCCATTTGAA | 57.003 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
2569 | 3558 | 8.731275 | ATTCGTATGTGATAGTCCATTTGAAA | 57.269 | 30.769 | 0.00 | 0.00 | 0.00 | 2.69 |
2570 | 3559 | 8.731275 | TTCGTATGTGATAGTCCATTTGAAAT | 57.269 | 30.769 | 0.00 | 0.00 | 0.00 | 2.17 |
2571 | 3560 | 8.141835 | TCGTATGTGATAGTCCATTTGAAATG | 57.858 | 34.615 | 10.84 | 10.84 | 0.00 | 2.32 |
2572 | 3561 | 7.984617 | TCGTATGTGATAGTCCATTTGAAATGA | 59.015 | 33.333 | 18.82 | 3.09 | 0.00 | 2.57 |
2573 | 3562 | 8.064222 | CGTATGTGATAGTCCATTTGAAATGAC | 58.936 | 37.037 | 18.82 | 13.92 | 0.00 | 3.06 |
2574 | 3563 | 9.113838 | GTATGTGATAGTCCATTTGAAATGACT | 57.886 | 33.333 | 18.82 | 19.11 | 0.00 | 3.41 |
2576 | 3565 | 9.857656 | ATGTGATAGTCCATTTGAAATGACTAT | 57.142 | 29.630 | 25.46 | 25.46 | 38.21 | 2.12 |
2583 | 3572 | 9.739276 | AGTCCATTTGAAATGACTATAAAGACA | 57.261 | 29.630 | 18.82 | 0.00 | 0.00 | 3.41 |
2601 | 3590 | 7.625828 | AAAGACAAATATTTAGGAACGGAGG | 57.374 | 36.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2602 | 3591 | 5.681639 | AGACAAATATTTAGGAACGGAGGG | 58.318 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
2603 | 3592 | 5.427481 | AGACAAATATTTAGGAACGGAGGGA | 59.573 | 40.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2604 | 3593 | 5.681639 | ACAAATATTTAGGAACGGAGGGAG | 58.318 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
2708 | 3699 | 2.268076 | ATGTCACGCCCTGGCAAAC | 61.268 | 57.895 | 9.17 | 3.54 | 38.24 | 2.93 |
2711 | 3702 | 1.754621 | TCACGCCCTGGCAAACAAA | 60.755 | 52.632 | 9.17 | 0.00 | 42.06 | 2.83 |
2756 | 3747 | 9.378551 | CTAACCATAGAGTGCACTTTATTAACA | 57.621 | 33.333 | 23.46 | 11.10 | 0.00 | 2.41 |
2821 | 3843 | 9.745018 | TCTCTGATCTCTATGACCAAAAATTTT | 57.255 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
2977 | 4002 | 1.354101 | TGGACACCGTGTAATCCCTT | 58.646 | 50.000 | 3.58 | 0.00 | 0.00 | 3.95 |
3018 | 4043 | 0.035739 | GAACGGTGGAGCCAAGGTTA | 59.964 | 55.000 | 6.47 | 0.00 | 36.97 | 2.85 |
3019 | 4044 | 0.036306 | AACGGTGGAGCCAAGGTTAG | 59.964 | 55.000 | 5.06 | 0.00 | 36.97 | 2.34 |
3020 | 4045 | 1.078426 | CGGTGGAGCCAAGGTTAGG | 60.078 | 63.158 | 0.00 | 0.00 | 36.97 | 2.69 |
3030 | 4055 | 3.199880 | CCAAGGTTAGGCTGGTCATAG | 57.800 | 52.381 | 0.00 | 0.00 | 0.00 | 2.23 |
3031 | 4056 | 2.505819 | CCAAGGTTAGGCTGGTCATAGT | 59.494 | 50.000 | 0.00 | 0.00 | 0.00 | 2.12 |
3032 | 4057 | 3.535561 | CAAGGTTAGGCTGGTCATAGTG | 58.464 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
3033 | 4058 | 2.119495 | AGGTTAGGCTGGTCATAGTGG | 58.881 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
3034 | 4059 | 1.141053 | GGTTAGGCTGGTCATAGTGGG | 59.859 | 57.143 | 0.00 | 0.00 | 0.00 | 4.61 |
3035 | 4060 | 1.141053 | GTTAGGCTGGTCATAGTGGGG | 59.859 | 57.143 | 0.00 | 0.00 | 0.00 | 4.96 |
3036 | 4061 | 0.639943 | TAGGCTGGTCATAGTGGGGA | 59.360 | 55.000 | 0.00 | 0.00 | 0.00 | 4.81 |
3037 | 4062 | 0.692419 | AGGCTGGTCATAGTGGGGAG | 60.692 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3038 | 4063 | 0.983378 | GGCTGGTCATAGTGGGGAGT | 60.983 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3039 | 4064 | 1.691482 | GGCTGGTCATAGTGGGGAGTA | 60.691 | 57.143 | 0.00 | 0.00 | 0.00 | 2.59 |
3040 | 4065 | 2.116238 | GCTGGTCATAGTGGGGAGTAA | 58.884 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
3041 | 4066 | 2.158943 | GCTGGTCATAGTGGGGAGTAAC | 60.159 | 54.545 | 0.00 | 0.00 | 0.00 | 2.50 |
3042 | 4067 | 3.375699 | CTGGTCATAGTGGGGAGTAACT | 58.624 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3043 | 4068 | 3.775316 | CTGGTCATAGTGGGGAGTAACTT | 59.225 | 47.826 | 0.00 | 0.00 | 0.00 | 2.66 |
3044 | 4069 | 4.950361 | TGGTCATAGTGGGGAGTAACTTA | 58.050 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
3045 | 4070 | 4.960469 | TGGTCATAGTGGGGAGTAACTTAG | 59.040 | 45.833 | 0.00 | 0.00 | 0.00 | 2.18 |
3046 | 4071 | 5.206587 | GGTCATAGTGGGGAGTAACTTAGA | 58.793 | 45.833 | 0.00 | 0.00 | 0.00 | 2.10 |
3047 | 4072 | 5.068855 | GGTCATAGTGGGGAGTAACTTAGAC | 59.931 | 48.000 | 0.00 | 0.00 | 32.58 | 2.59 |
3048 | 4073 | 5.892686 | GTCATAGTGGGGAGTAACTTAGACT | 59.107 | 44.000 | 0.00 | 0.00 | 31.58 | 3.24 |
3049 | 4074 | 7.059156 | GTCATAGTGGGGAGTAACTTAGACTA | 58.941 | 42.308 | 0.00 | 0.00 | 31.58 | 2.59 |
3050 | 4075 | 7.229106 | GTCATAGTGGGGAGTAACTTAGACTAG | 59.771 | 44.444 | 0.00 | 0.00 | 31.58 | 2.57 |
3051 | 4076 | 5.533333 | AGTGGGGAGTAACTTAGACTAGT | 57.467 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
3052 | 4077 | 5.262804 | AGTGGGGAGTAACTTAGACTAGTG | 58.737 | 45.833 | 0.00 | 0.00 | 0.00 | 2.74 |
3053 | 4078 | 5.015515 | GTGGGGAGTAACTTAGACTAGTGT | 58.984 | 45.833 | 0.00 | 0.00 | 0.00 | 3.55 |
3054 | 4079 | 5.125257 | GTGGGGAGTAACTTAGACTAGTGTC | 59.875 | 48.000 | 0.00 | 0.00 | 43.22 | 3.67 |
3055 | 4080 | 5.222192 | TGGGGAGTAACTTAGACTAGTGTCA | 60.222 | 44.000 | 0.00 | 0.00 | 45.20 | 3.58 |
3056 | 4081 | 5.892686 | GGGGAGTAACTTAGACTAGTGTCAT | 59.107 | 44.000 | 0.00 | 0.00 | 45.20 | 3.06 |
3057 | 4082 | 6.183360 | GGGGAGTAACTTAGACTAGTGTCATG | 60.183 | 46.154 | 0.00 | 0.00 | 45.20 | 3.07 |
3058 | 4083 | 6.267070 | GGAGTAACTTAGACTAGTGTCATGC | 58.733 | 44.000 | 0.00 | 0.00 | 45.20 | 4.06 |
3059 | 4084 | 5.881447 | AGTAACTTAGACTAGTGTCATGCG | 58.119 | 41.667 | 0.00 | 0.00 | 45.20 | 4.73 |
3060 | 4085 | 4.785511 | AACTTAGACTAGTGTCATGCGT | 57.214 | 40.909 | 0.00 | 0.00 | 45.20 | 5.24 |
3061 | 4086 | 5.892160 | AACTTAGACTAGTGTCATGCGTA | 57.108 | 39.130 | 0.00 | 0.00 | 45.20 | 4.42 |
3062 | 4087 | 6.452494 | AACTTAGACTAGTGTCATGCGTAT | 57.548 | 37.500 | 0.00 | 0.00 | 45.20 | 3.06 |
3063 | 4088 | 5.822278 | ACTTAGACTAGTGTCATGCGTATG | 58.178 | 41.667 | 7.22 | 7.22 | 45.20 | 2.39 |
3064 | 4089 | 5.589050 | ACTTAGACTAGTGTCATGCGTATGA | 59.411 | 40.000 | 12.50 | 12.50 | 45.20 | 2.15 |
3075 | 4100 | 5.324784 | TCATGCGTATGACACTTCTAAGT | 57.675 | 39.130 | 12.50 | 0.00 | 38.37 | 2.24 |
3076 | 4101 | 5.720202 | TCATGCGTATGACACTTCTAAGTT | 58.280 | 37.500 | 12.50 | 0.00 | 38.37 | 2.66 |
3077 | 4102 | 6.859017 | TCATGCGTATGACACTTCTAAGTTA | 58.141 | 36.000 | 12.50 | 0.00 | 38.37 | 2.24 |
3078 | 4103 | 6.750501 | TCATGCGTATGACACTTCTAAGTTAC | 59.249 | 38.462 | 12.50 | 0.00 | 38.37 | 2.50 |
3079 | 4104 | 6.263516 | TGCGTATGACACTTCTAAGTTACT | 57.736 | 37.500 | 0.00 | 0.00 | 37.08 | 2.24 |
3080 | 4105 | 7.381766 | TGCGTATGACACTTCTAAGTTACTA | 57.618 | 36.000 | 0.00 | 0.00 | 37.08 | 1.82 |
3081 | 4106 | 7.993101 | TGCGTATGACACTTCTAAGTTACTAT | 58.007 | 34.615 | 0.00 | 0.00 | 37.08 | 2.12 |
3082 | 4107 | 8.127327 | TGCGTATGACACTTCTAAGTTACTATC | 58.873 | 37.037 | 0.00 | 0.00 | 37.08 | 2.08 |
3083 | 4108 | 8.344098 | GCGTATGACACTTCTAAGTTACTATCT | 58.656 | 37.037 | 0.00 | 0.00 | 37.08 | 1.98 |
3084 | 4109 | 9.866936 | CGTATGACACTTCTAAGTTACTATCTC | 57.133 | 37.037 | 0.00 | 0.00 | 37.08 | 2.75 |
3086 | 4111 | 8.824756 | ATGACACTTCTAAGTTACTATCTCCA | 57.175 | 34.615 | 0.00 | 0.00 | 37.08 | 3.86 |
3087 | 4112 | 8.824756 | TGACACTTCTAAGTTACTATCTCCAT | 57.175 | 34.615 | 0.00 | 0.00 | 37.08 | 3.41 |
3088 | 4113 | 9.916360 | TGACACTTCTAAGTTACTATCTCCATA | 57.084 | 33.333 | 0.00 | 0.00 | 37.08 | 2.74 |
3090 | 4115 | 9.924010 | ACACTTCTAAGTTACTATCTCCATAGT | 57.076 | 33.333 | 0.00 | 0.56 | 41.75 | 2.12 |
3100 | 4125 | 9.765795 | GTTACTATCTCCATAGTGCAAAGTAAT | 57.234 | 33.333 | 5.12 | 0.00 | 44.33 | 1.89 |
3129 | 4154 | 9.672673 | AGTACTAGTGTCATAAATTGCTTCATT | 57.327 | 29.630 | 5.39 | 0.00 | 0.00 | 2.57 |
3145 | 4170 | 9.790344 | ATTGCTTCATTTATTAGCTCATAGACT | 57.210 | 29.630 | 0.00 | 0.00 | 35.93 | 3.24 |
3147 | 4172 | 8.424133 | TGCTTCATTTATTAGCTCATAGACTCA | 58.576 | 33.333 | 0.00 | 0.00 | 35.93 | 3.41 |
3148 | 4173 | 9.434420 | GCTTCATTTATTAGCTCATAGACTCAT | 57.566 | 33.333 | 0.00 | 0.00 | 32.26 | 2.90 |
3166 | 4191 | 4.713946 | TTTTTCTCGGGATGCGCT | 57.286 | 50.000 | 9.73 | 0.00 | 0.00 | 5.92 |
3168 | 4193 | 2.325583 | TTTTTCTCGGGATGCGCTAT | 57.674 | 45.000 | 9.73 | 0.00 | 0.00 | 2.97 |
3169 | 4194 | 1.581934 | TTTTCTCGGGATGCGCTATG | 58.418 | 50.000 | 9.73 | 0.00 | 0.00 | 2.23 |
3170 | 4195 | 0.464036 | TTTCTCGGGATGCGCTATGT | 59.536 | 50.000 | 9.73 | 0.00 | 0.00 | 2.29 |
3171 | 4196 | 0.464036 | TTCTCGGGATGCGCTATGTT | 59.536 | 50.000 | 9.73 | 0.00 | 0.00 | 2.71 |
3172 | 4197 | 1.324383 | TCTCGGGATGCGCTATGTTA | 58.676 | 50.000 | 9.73 | 0.00 | 0.00 | 2.41 |
3173 | 4198 | 1.893137 | TCTCGGGATGCGCTATGTTAT | 59.107 | 47.619 | 9.73 | 0.00 | 0.00 | 1.89 |
3174 | 4199 | 3.086282 | TCTCGGGATGCGCTATGTTATA | 58.914 | 45.455 | 9.73 | 0.00 | 0.00 | 0.98 |
3175 | 4200 | 3.128764 | TCTCGGGATGCGCTATGTTATAG | 59.871 | 47.826 | 9.73 | 0.00 | 0.00 | 1.31 |
3176 | 4201 | 2.823747 | TCGGGATGCGCTATGTTATAGT | 59.176 | 45.455 | 9.73 | 0.00 | 0.00 | 2.12 |
3178 | 4203 | 4.460034 | TCGGGATGCGCTATGTTATAGTAA | 59.540 | 41.667 | 9.73 | 0.00 | 0.00 | 2.24 |
3179 | 4204 | 4.561606 | CGGGATGCGCTATGTTATAGTAAC | 59.438 | 45.833 | 9.73 | 0.00 | 0.00 | 2.50 |
3180 | 4205 | 5.475719 | GGGATGCGCTATGTTATAGTAACA | 58.524 | 41.667 | 9.73 | 5.15 | 34.31 | 2.41 |
3181 | 4206 | 6.106673 | GGGATGCGCTATGTTATAGTAACAT | 58.893 | 40.000 | 9.73 | 16.71 | 42.82 | 2.71 |
3182 | 4207 | 7.262772 | GGGATGCGCTATGTTATAGTAACATA | 58.737 | 38.462 | 9.73 | 17.06 | 40.87 | 2.29 |
3183 | 4208 | 7.926555 | GGGATGCGCTATGTTATAGTAACATAT | 59.073 | 37.037 | 17.90 | 8.21 | 40.91 | 1.78 |
3202 | 4227 | 6.423182 | ACATATTATGTTACCACAAGCACCT | 58.577 | 36.000 | 3.40 | 0.00 | 41.63 | 4.00 |
3204 | 4229 | 4.634012 | TTATGTTACCACAAGCACCTCT | 57.366 | 40.909 | 0.00 | 0.00 | 36.16 | 3.69 |
3206 | 4231 | 3.290948 | TGTTACCACAAGCACCTCTTT | 57.709 | 42.857 | 0.00 | 0.00 | 31.27 | 2.52 |
3207 | 4232 | 3.211045 | TGTTACCACAAGCACCTCTTTC | 58.789 | 45.455 | 0.00 | 0.00 | 31.27 | 2.62 |
3208 | 4233 | 2.552743 | GTTACCACAAGCACCTCTTTCC | 59.447 | 50.000 | 0.00 | 0.00 | 31.27 | 3.13 |
3210 | 4235 | 1.202818 | ACCACAAGCACCTCTTTCCTC | 60.203 | 52.381 | 0.00 | 0.00 | 31.27 | 3.71 |
3211 | 4236 | 1.202806 | CCACAAGCACCTCTTTCCTCA | 60.203 | 52.381 | 0.00 | 0.00 | 31.27 | 3.86 |
3212 | 4237 | 2.553904 | CCACAAGCACCTCTTTCCTCAT | 60.554 | 50.000 | 0.00 | 0.00 | 31.27 | 2.90 |
3214 | 4239 | 4.326826 | CACAAGCACCTCTTTCCTCATTA | 58.673 | 43.478 | 0.00 | 0.00 | 31.27 | 1.90 |
3215 | 4240 | 4.761739 | CACAAGCACCTCTTTCCTCATTAA | 59.238 | 41.667 | 0.00 | 0.00 | 31.27 | 1.40 |
3216 | 4241 | 5.241506 | CACAAGCACCTCTTTCCTCATTAAA | 59.758 | 40.000 | 0.00 | 0.00 | 31.27 | 1.52 |
3217 | 4242 | 6.012745 | ACAAGCACCTCTTTCCTCATTAAAT | 58.987 | 36.000 | 0.00 | 0.00 | 31.27 | 1.40 |
3218 | 4243 | 7.121168 | CACAAGCACCTCTTTCCTCATTAAATA | 59.879 | 37.037 | 0.00 | 0.00 | 31.27 | 1.40 |
3220 | 4245 | 6.963322 | AGCACCTCTTTCCTCATTAAATAGT | 58.037 | 36.000 | 0.00 | 0.00 | 0.00 | 2.12 |
3221 | 4246 | 7.406104 | AGCACCTCTTTCCTCATTAAATAGTT | 58.594 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
3222 | 4247 | 7.337942 | AGCACCTCTTTCCTCATTAAATAGTTG | 59.662 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
3224 | 4249 | 6.603599 | ACCTCTTTCCTCATTAAATAGTTGCC | 59.396 | 38.462 | 0.00 | 0.00 | 0.00 | 4.52 |
3225 | 4250 | 6.603201 | CCTCTTTCCTCATTAAATAGTTGCCA | 59.397 | 38.462 | 0.00 | 0.00 | 0.00 | 4.92 |
3227 | 4252 | 6.945435 | TCTTTCCTCATTAAATAGTTGCCACA | 59.055 | 34.615 | 0.00 | 0.00 | 0.00 | 4.17 |
3228 | 4253 | 7.615365 | TCTTTCCTCATTAAATAGTTGCCACAT | 59.385 | 33.333 | 0.00 | 0.00 | 0.00 | 3.21 |
3229 | 4254 | 8.815565 | TTTCCTCATTAAATAGTTGCCACATA | 57.184 | 30.769 | 0.00 | 0.00 | 0.00 | 2.29 |
3230 | 4255 | 8.815565 | TTCCTCATTAAATAGTTGCCACATAA | 57.184 | 30.769 | 0.00 | 0.00 | 0.00 | 1.90 |
3231 | 4256 | 8.450578 | TCCTCATTAAATAGTTGCCACATAAG | 57.549 | 34.615 | 0.00 | 0.00 | 0.00 | 1.73 |
3233 | 4258 | 7.201812 | CCTCATTAAATAGTTGCCACATAAGCA | 60.202 | 37.037 | 0.00 | 0.00 | 38.81 | 3.91 |
3246 | 4271 | 7.715657 | TGCCACATAAGCAAAATTATCTTAGG | 58.284 | 34.615 | 0.00 | 0.00 | 37.28 | 2.69 |
3247 | 4272 | 7.559533 | TGCCACATAAGCAAAATTATCTTAGGA | 59.440 | 33.333 | 10.73 | 0.00 | 37.28 | 2.94 |
3248 | 4273 | 8.579863 | GCCACATAAGCAAAATTATCTTAGGAT | 58.420 | 33.333 | 10.73 | 0.00 | 36.07 | 3.24 |
3265 | 4290 | 8.890410 | TCTTAGGATGTGTTAAGTTACTACCT | 57.110 | 34.615 | 0.00 | 0.00 | 0.00 | 3.08 |
3266 | 4291 | 9.979897 | TCTTAGGATGTGTTAAGTTACTACCTA | 57.020 | 33.333 | 0.00 | 0.00 | 0.00 | 3.08 |
3269 | 4294 | 8.661752 | AGGATGTGTTAAGTTACTACCTAAGT | 57.338 | 34.615 | 0.00 | 0.00 | 42.62 | 2.24 |
3270 | 4295 | 9.097946 | AGGATGTGTTAAGTTACTACCTAAGTT | 57.902 | 33.333 | 0.00 | 0.00 | 39.80 | 2.66 |
3275 | 4300 | 9.847706 | GTGTTAAGTTACTACCTAAGTTACTCC | 57.152 | 37.037 | 0.00 | 0.00 | 45.09 | 3.85 |
3276 | 4301 | 9.813826 | TGTTAAGTTACTACCTAAGTTACTCCT | 57.186 | 33.333 | 0.00 | 0.00 | 45.09 | 3.69 |
3286 | 4311 | 7.159201 | ACCTAAGTTACTCCTACTATGGCTA | 57.841 | 40.000 | 0.00 | 0.00 | 0.00 | 3.93 |
3287 | 4312 | 7.232910 | ACCTAAGTTACTCCTACTATGGCTAG | 58.767 | 42.308 | 0.00 | 0.00 | 0.00 | 3.42 |
3288 | 4313 | 6.151480 | CCTAAGTTACTCCTACTATGGCTAGC | 59.849 | 46.154 | 6.04 | 6.04 | 0.00 | 3.42 |
3290 | 4315 | 4.106663 | AGTTACTCCTACTATGGCTAGCCT | 59.893 | 45.833 | 33.07 | 20.80 | 36.94 | 4.58 |
3291 | 4316 | 3.621682 | ACTCCTACTATGGCTAGCCTT | 57.378 | 47.619 | 33.07 | 28.43 | 36.94 | 4.35 |
3296 | 4321 | 6.148735 | TCCTACTATGGCTAGCCTTATGTA | 57.851 | 41.667 | 33.07 | 26.46 | 36.94 | 2.29 |
3297 | 4322 | 5.950549 | TCCTACTATGGCTAGCCTTATGTAC | 59.049 | 44.000 | 33.07 | 5.85 | 36.94 | 2.90 |
3300 | 4325 | 3.771577 | ATGGCTAGCCTTATGTACACC | 57.228 | 47.619 | 33.07 | 3.78 | 36.94 | 4.16 |
3329 | 4844 | 7.123547 | CAGGGGTAGCACAAAAATTTAGGAATA | 59.876 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
3332 | 4847 | 7.860872 | GGGTAGCACAAAAATTTAGGAATATCG | 59.139 | 37.037 | 0.00 | 0.00 | 0.00 | 2.92 |
3336 | 4851 | 6.475402 | GCACAAAAATTTAGGAATATCGTGGG | 59.525 | 38.462 | 0.00 | 0.00 | 0.00 | 4.61 |
3340 | 4855 | 5.568620 | AATTTAGGAATATCGTGGGAGCT | 57.431 | 39.130 | 0.00 | 0.00 | 0.00 | 4.09 |
3403 | 5757 | 1.898574 | GCCTCCCACAACACCACTG | 60.899 | 63.158 | 0.00 | 0.00 | 0.00 | 3.66 |
3443 | 7120 | 3.004862 | GTTAAACCCACCCTATCGTGTG | 58.995 | 50.000 | 0.00 | 0.00 | 31.47 | 3.82 |
3451 | 7131 | 1.136305 | ACCCTATCGTGTGGATCGTTG | 59.864 | 52.381 | 0.00 | 0.00 | 36.55 | 4.10 |
3468 | 7148 | 0.911045 | TTGGATCTGGCAGGAGAGCA | 60.911 | 55.000 | 15.73 | 0.00 | 35.83 | 4.26 |
3475 | 7155 | 0.991146 | TGGCAGGAGAGCACCATTTA | 59.009 | 50.000 | 0.00 | 0.00 | 35.83 | 1.40 |
3479 | 7159 | 3.084786 | GCAGGAGAGCACCATTTACTTT | 58.915 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
3485 | 7165 | 7.011482 | CAGGAGAGCACCATTTACTTTATGTAC | 59.989 | 40.741 | 0.00 | 0.00 | 0.00 | 2.90 |
3486 | 7166 | 6.260271 | GGAGAGCACCATTTACTTTATGTACC | 59.740 | 42.308 | 0.00 | 0.00 | 0.00 | 3.34 |
3506 | 7187 | 1.482593 | CAGGTGCTAGAAATCGGGACT | 59.517 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
3509 | 7190 | 2.541556 | GTGCTAGAAATCGGGACTCAC | 58.458 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
3560 | 8461 | 5.359576 | AGTGTCAAAAACATGAAACTAGGCA | 59.640 | 36.000 | 0.00 | 0.00 | 44.30 | 4.75 |
3622 | 8523 | 1.068474 | AGCATGTTCTACGCGTTGAC | 58.932 | 50.000 | 22.62 | 17.01 | 0.00 | 3.18 |
3636 | 8538 | 5.575019 | ACGCGTTGACAAAATAAAGAAAGT | 58.425 | 33.333 | 5.58 | 0.00 | 0.00 | 2.66 |
3718 | 8620 | 9.033481 | CATAGTGTTTGAAACAATTGACACAAT | 57.967 | 29.630 | 16.34 | 12.11 | 44.16 | 2.71 |
3741 | 8643 | 6.844696 | TGAATGAGCTGGTAAATTCGATAC | 57.155 | 37.500 | 0.00 | 0.00 | 32.78 | 2.24 |
3779 | 8687 | 1.265236 | GATGGATCATCGGCTCTCCT | 58.735 | 55.000 | 0.00 | 0.00 | 31.01 | 3.69 |
3807 | 8715 | 4.811555 | TGTATGAACACTGCAAACACTC | 57.188 | 40.909 | 0.00 | 0.00 | 0.00 | 3.51 |
3876 | 8809 | 0.824759 | GTCAAGGCGAGTACTCCCAT | 59.175 | 55.000 | 24.02 | 14.57 | 0.00 | 4.00 |
3922 | 8856 | 7.768120 | TGCCCGCATCTTAAATTAAAATTTGAT | 59.232 | 29.630 | 10.26 | 3.84 | 38.90 | 2.57 |
3923 | 8857 | 8.063630 | GCCCGCATCTTAAATTAAAATTTGATG | 58.936 | 33.333 | 16.57 | 16.57 | 39.41 | 3.07 |
3963 | 9060 | 9.567848 | GTAAATGTGGGTTATATGTGACAAAAG | 57.432 | 33.333 | 0.00 | 0.00 | 0.00 | 2.27 |
3971 | 9068 | 9.398538 | GGGTTATATGTGACAAAAGTTATACCA | 57.601 | 33.333 | 0.00 | 0.00 | 0.00 | 3.25 |
4097 | 9194 | 4.036262 | GTGTGCGCCTTATTCATTGGAATA | 59.964 | 41.667 | 4.18 | 0.00 | 41.89 | 1.75 |
4107 | 12404 | 9.921637 | CCTTATTCATTGGAATAGAGAGAGTAC | 57.078 | 37.037 | 0.00 | 0.00 | 44.50 | 2.73 |
4159 | 12456 | 6.118852 | TGCTGCATGTGTATCAGGTTTATTA | 58.881 | 36.000 | 0.00 | 0.00 | 0.00 | 0.98 |
4160 | 12457 | 6.260714 | TGCTGCATGTGTATCAGGTTTATTAG | 59.739 | 38.462 | 0.00 | 0.00 | 0.00 | 1.73 |
4161 | 12458 | 6.483307 | GCTGCATGTGTATCAGGTTTATTAGA | 59.517 | 38.462 | 0.00 | 0.00 | 0.00 | 2.10 |
4162 | 12459 | 7.173907 | GCTGCATGTGTATCAGGTTTATTAGAT | 59.826 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
4163 | 12460 | 9.710900 | CTGCATGTGTATCAGGTTTATTAGATA | 57.289 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
4184 | 12481 | 8.457238 | AGATATCCTTTTATTCACTTGCTTCC | 57.543 | 34.615 | 0.00 | 0.00 | 0.00 | 3.46 |
4185 | 12482 | 5.921962 | ATCCTTTTATTCACTTGCTTCCC | 57.078 | 39.130 | 0.00 | 0.00 | 0.00 | 3.97 |
4186 | 12483 | 4.998051 | TCCTTTTATTCACTTGCTTCCCT | 58.002 | 39.130 | 0.00 | 0.00 | 0.00 | 4.20 |
4187 | 12484 | 5.010282 | TCCTTTTATTCACTTGCTTCCCTC | 58.990 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
4188 | 12485 | 4.158579 | CCTTTTATTCACTTGCTTCCCTCC | 59.841 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
4189 | 12486 | 2.691409 | TATTCACTTGCTTCCCTCCG | 57.309 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
4190 | 12487 | 0.693049 | ATTCACTTGCTTCCCTCCGT | 59.307 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
4191 | 12488 | 0.472471 | TTCACTTGCTTCCCTCCGTT | 59.528 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
4192 | 12489 | 0.472471 | TCACTTGCTTCCCTCCGTTT | 59.528 | 50.000 | 0.00 | 0.00 | 0.00 | 3.60 |
4193 | 12490 | 0.593128 | CACTTGCTTCCCTCCGTTTG | 59.407 | 55.000 | 0.00 | 0.00 | 0.00 | 2.93 |
4194 | 12491 | 1.172812 | ACTTGCTTCCCTCCGTTTGC | 61.173 | 55.000 | 0.00 | 0.00 | 0.00 | 3.68 |
4195 | 12492 | 2.187599 | CTTGCTTCCCTCCGTTTGCG | 62.188 | 60.000 | 0.00 | 0.00 | 37.95 | 4.85 |
4196 | 12493 | 2.358247 | GCTTCCCTCCGTTTGCGA | 60.358 | 61.111 | 0.00 | 0.00 | 41.33 | 5.10 |
4197 | 12494 | 2.391389 | GCTTCCCTCCGTTTGCGAG | 61.391 | 63.158 | 0.00 | 0.00 | 41.33 | 5.03 |
4198 | 12495 | 2.358247 | TTCCCTCCGTTTGCGAGC | 60.358 | 61.111 | 0.00 | 0.00 | 41.33 | 5.03 |
4199 | 12496 | 2.788191 | CTTCCCTCCGTTTGCGAGCT | 62.788 | 60.000 | 0.00 | 0.00 | 41.33 | 4.09 |
4200 | 12497 | 3.121030 | CCCTCCGTTTGCGAGCTG | 61.121 | 66.667 | 0.00 | 0.00 | 41.33 | 4.24 |
4201 | 12498 | 2.357517 | CCTCCGTTTGCGAGCTGT | 60.358 | 61.111 | 0.00 | 0.00 | 41.33 | 4.40 |
4202 | 12499 | 1.080093 | CCTCCGTTTGCGAGCTGTA | 60.080 | 57.895 | 0.00 | 0.00 | 41.33 | 2.74 |
4203 | 12500 | 0.669318 | CCTCCGTTTGCGAGCTGTAA | 60.669 | 55.000 | 0.00 | 0.00 | 41.33 | 2.41 |
4204 | 12501 | 1.359848 | CTCCGTTTGCGAGCTGTAAT | 58.640 | 50.000 | 0.00 | 0.00 | 41.33 | 1.89 |
4205 | 12502 | 2.536365 | CTCCGTTTGCGAGCTGTAATA | 58.464 | 47.619 | 0.00 | 0.00 | 41.33 | 0.98 |
4206 | 12503 | 2.264813 | TCCGTTTGCGAGCTGTAATAC | 58.735 | 47.619 | 0.00 | 0.00 | 41.33 | 1.89 |
4207 | 12504 | 2.094390 | TCCGTTTGCGAGCTGTAATACT | 60.094 | 45.455 | 0.00 | 0.00 | 41.33 | 2.12 |
4208 | 12505 | 2.671396 | CCGTTTGCGAGCTGTAATACTT | 59.329 | 45.455 | 0.00 | 0.00 | 41.33 | 2.24 |
4209 | 12506 | 3.124636 | CCGTTTGCGAGCTGTAATACTTT | 59.875 | 43.478 | 0.00 | 0.00 | 41.33 | 2.66 |
4210 | 12507 | 4.378046 | CCGTTTGCGAGCTGTAATACTTTT | 60.378 | 41.667 | 0.00 | 0.00 | 41.33 | 2.27 |
4211 | 12508 | 5.163933 | CCGTTTGCGAGCTGTAATACTTTTA | 60.164 | 40.000 | 0.00 | 0.00 | 41.33 | 1.52 |
4212 | 12509 | 5.726679 | CGTTTGCGAGCTGTAATACTTTTAC | 59.273 | 40.000 | 0.00 | 0.00 | 41.33 | 2.01 |
4213 | 12510 | 5.444586 | TTGCGAGCTGTAATACTTTTACG | 57.555 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
4214 | 12511 | 4.735985 | TGCGAGCTGTAATACTTTTACGA | 58.264 | 39.130 | 0.00 | 0.00 | 0.00 | 3.43 |
4215 | 12512 | 4.560035 | TGCGAGCTGTAATACTTTTACGAC | 59.440 | 41.667 | 0.00 | 0.00 | 0.00 | 4.34 |
4216 | 12513 | 4.797349 | GCGAGCTGTAATACTTTTACGACT | 59.203 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
4217 | 12514 | 5.287992 | GCGAGCTGTAATACTTTTACGACTT | 59.712 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4218 | 12515 | 6.183360 | GCGAGCTGTAATACTTTTACGACTTT | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 2.66 |
4219 | 12516 | 7.164858 | CGAGCTGTAATACTTTTACGACTTTG | 58.835 | 38.462 | 0.00 | 0.00 | 0.00 | 2.77 |
4220 | 12517 | 7.148853 | CGAGCTGTAATACTTTTACGACTTTGT | 60.149 | 37.037 | 0.00 | 0.00 | 0.00 | 2.83 |
4221 | 12518 | 7.793902 | AGCTGTAATACTTTTACGACTTTGTG | 58.206 | 34.615 | 0.00 | 0.00 | 0.00 | 3.33 |
4222 | 12519 | 7.654520 | AGCTGTAATACTTTTACGACTTTGTGA | 59.345 | 33.333 | 0.00 | 0.00 | 0.00 | 3.58 |
4223 | 12520 | 8.440833 | GCTGTAATACTTTTACGACTTTGTGAT | 58.559 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
4229 | 12526 | 9.701098 | ATACTTTTACGACTTTGTGATACTTCA | 57.299 | 29.630 | 0.00 | 0.00 | 0.00 | 3.02 |
4230 | 12527 | 8.603242 | ACTTTTACGACTTTGTGATACTTCAT | 57.397 | 30.769 | 0.00 | 0.00 | 33.56 | 2.57 |
4231 | 12528 | 8.495949 | ACTTTTACGACTTTGTGATACTTCATG | 58.504 | 33.333 | 0.00 | 0.00 | 33.56 | 3.07 |
4232 | 12529 | 6.961359 | TTACGACTTTGTGATACTTCATGG | 57.039 | 37.500 | 0.00 | 0.00 | 33.56 | 3.66 |
4233 | 12530 | 4.894784 | ACGACTTTGTGATACTTCATGGT | 58.105 | 39.130 | 0.00 | 0.00 | 33.56 | 3.55 |
4234 | 12531 | 5.305585 | ACGACTTTGTGATACTTCATGGTT | 58.694 | 37.500 | 0.00 | 0.00 | 33.56 | 3.67 |
4235 | 12532 | 5.763204 | ACGACTTTGTGATACTTCATGGTTT | 59.237 | 36.000 | 0.00 | 0.00 | 33.56 | 3.27 |
4236 | 12533 | 6.262273 | ACGACTTTGTGATACTTCATGGTTTT | 59.738 | 34.615 | 0.00 | 0.00 | 33.56 | 2.43 |
4237 | 12534 | 7.138736 | CGACTTTGTGATACTTCATGGTTTTT | 58.861 | 34.615 | 0.00 | 0.00 | 33.56 | 1.94 |
4258 | 12555 | 5.595257 | TTTTAATAAGATGGCTGCATGCA | 57.405 | 34.783 | 21.29 | 21.29 | 45.15 | 3.96 |
4259 | 12556 | 5.794726 | TTTAATAAGATGGCTGCATGCAT | 57.205 | 34.783 | 22.97 | 5.92 | 45.15 | 3.96 |
4260 | 12557 | 3.936372 | AATAAGATGGCTGCATGCATC | 57.064 | 42.857 | 22.97 | 17.75 | 45.15 | 3.91 |
4261 | 12558 | 2.351706 | TAAGATGGCTGCATGCATCA | 57.648 | 45.000 | 22.97 | 21.78 | 45.15 | 3.07 |
4262 | 12559 | 1.704641 | AAGATGGCTGCATGCATCAT | 58.295 | 45.000 | 26.51 | 26.51 | 45.15 | 2.45 |
4263 | 12560 | 1.704641 | AGATGGCTGCATGCATCATT | 58.295 | 45.000 | 26.74 | 17.93 | 45.15 | 2.57 |
4264 | 12561 | 2.871453 | AGATGGCTGCATGCATCATTA | 58.129 | 42.857 | 26.74 | 13.79 | 45.15 | 1.90 |
4265 | 12562 | 3.431415 | AGATGGCTGCATGCATCATTAT | 58.569 | 40.909 | 26.74 | 19.38 | 45.15 | 1.28 |
4266 | 12563 | 3.193479 | AGATGGCTGCATGCATCATTATG | 59.807 | 43.478 | 26.74 | 14.81 | 45.15 | 1.90 |
4267 | 12564 | 2.588620 | TGGCTGCATGCATCATTATGA | 58.411 | 42.857 | 22.97 | 0.00 | 45.15 | 2.15 |
4268 | 12565 | 3.161866 | TGGCTGCATGCATCATTATGAT | 58.838 | 40.909 | 22.97 | 1.25 | 45.15 | 2.45 |
4278 | 12575 | 2.174363 | TCATTATGATGCAGAGGCCG | 57.826 | 50.000 | 0.00 | 0.00 | 40.13 | 6.13 |
4279 | 12576 | 1.162698 | CATTATGATGCAGAGGCCGG | 58.837 | 55.000 | 0.00 | 0.00 | 40.13 | 6.13 |
4280 | 12577 | 0.037303 | ATTATGATGCAGAGGCCGGG | 59.963 | 55.000 | 2.18 | 0.00 | 40.13 | 5.73 |
4281 | 12578 | 2.055689 | TTATGATGCAGAGGCCGGGG | 62.056 | 60.000 | 2.18 | 0.00 | 40.13 | 5.73 |
4284 | 12581 | 4.815973 | ATGCAGAGGCCGGGGGTA | 62.816 | 66.667 | 2.18 | 0.00 | 40.13 | 3.69 |
4287 | 12584 | 3.782443 | CAGAGGCCGGGGGTACAC | 61.782 | 72.222 | 2.18 | 0.00 | 0.00 | 2.90 |
4297 | 12594 | 3.896854 | GGGGTACACCTCCATTTCC | 57.103 | 57.895 | 6.99 | 0.00 | 40.03 | 3.13 |
4298 | 12595 | 0.996583 | GGGGTACACCTCCATTTCCA | 59.003 | 55.000 | 6.99 | 0.00 | 40.03 | 3.53 |
4299 | 12596 | 1.356398 | GGGGTACACCTCCATTTCCAA | 59.644 | 52.381 | 6.99 | 0.00 | 40.03 | 3.53 |
4300 | 12597 | 2.225167 | GGGGTACACCTCCATTTCCAAA | 60.225 | 50.000 | 6.99 | 0.00 | 40.03 | 3.28 |
4301 | 12598 | 3.502356 | GGGTACACCTCCATTTCCAAAA | 58.498 | 45.455 | 0.00 | 0.00 | 35.85 | 2.44 |
4302 | 12599 | 3.898741 | GGGTACACCTCCATTTCCAAAAA | 59.101 | 43.478 | 0.00 | 0.00 | 35.85 | 1.94 |
4464 | 12816 | 1.251251 | ATTGGTGAGGCAGTTGCTTC | 58.749 | 50.000 | 9.06 | 9.06 | 45.94 | 3.86 |
4542 | 12894 | 0.179161 | ACACGCAGAGACGCATAGAC | 60.179 | 55.000 | 0.00 | 0.00 | 36.19 | 2.59 |
4619 | 12971 | 2.094675 | GCATGGAGCTAGCCTTTTTGA | 58.905 | 47.619 | 12.13 | 0.00 | 41.15 | 2.69 |
4622 | 12974 | 3.004752 | TGGAGCTAGCCTTTTTGATCC | 57.995 | 47.619 | 12.13 | 9.74 | 35.76 | 3.36 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 3.952323 | CCTACTTCCTCTGTCCGTGAATA | 59.048 | 47.826 | 0.00 | 0.00 | 0.00 | 1.75 |
1 | 2 | 2.761208 | CCTACTTCCTCTGTCCGTGAAT | 59.239 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
4 | 5 | 1.546961 | ACCTACTTCCTCTGTCCGTG | 58.453 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
6 | 7 | 3.002038 | ACTACCTACTTCCTCTGTCCG | 57.998 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
7 | 8 | 5.114764 | AGTACTACCTACTTCCTCTGTCC | 57.885 | 47.826 | 0.00 | 0.00 | 30.80 | 4.02 |
8 | 9 | 7.465353 | AAAAGTACTACCTACTTCCTCTGTC | 57.535 | 40.000 | 0.00 | 0.00 | 43.78 | 3.51 |
9 | 10 | 7.852550 | AAAAAGTACTACCTACTTCCTCTGT | 57.147 | 36.000 | 0.00 | 0.00 | 43.78 | 3.41 |
32 | 33 | 7.607615 | AGTACTACCTACTCTGTTCCAAAAA | 57.392 | 36.000 | 0.00 | 0.00 | 28.44 | 1.94 |
33 | 34 | 7.725397 | TGTAGTACTACCTACTCTGTTCCAAAA | 59.275 | 37.037 | 26.41 | 2.64 | 38.49 | 2.44 |
34 | 35 | 7.233632 | TGTAGTACTACCTACTCTGTTCCAAA | 58.766 | 38.462 | 26.41 | 3.00 | 38.49 | 3.28 |
35 | 36 | 6.782986 | TGTAGTACTACCTACTCTGTTCCAA | 58.217 | 40.000 | 26.41 | 3.60 | 38.49 | 3.53 |
36 | 37 | 6.378661 | TGTAGTACTACCTACTCTGTTCCA | 57.621 | 41.667 | 26.41 | 4.07 | 38.49 | 3.53 |
37 | 38 | 6.883756 | ACTTGTAGTACTACCTACTCTGTTCC | 59.116 | 42.308 | 26.41 | 1.56 | 38.49 | 3.62 |
38 | 39 | 7.920160 | ACTTGTAGTACTACCTACTCTGTTC | 57.080 | 40.000 | 26.41 | 1.75 | 38.49 | 3.18 |
39 | 40 | 8.574737 | CAAACTTGTAGTACTACCTACTCTGTT | 58.425 | 37.037 | 26.41 | 17.04 | 38.49 | 3.16 |
40 | 41 | 7.309073 | GCAAACTTGTAGTACTACCTACTCTGT | 60.309 | 40.741 | 26.41 | 13.17 | 38.49 | 3.41 |
41 | 42 | 7.028361 | GCAAACTTGTAGTACTACCTACTCTG | 58.972 | 42.308 | 26.41 | 17.68 | 38.49 | 3.35 |
42 | 43 | 6.718454 | TGCAAACTTGTAGTACTACCTACTCT | 59.282 | 38.462 | 26.41 | 7.50 | 38.49 | 3.24 |
43 | 44 | 6.917533 | TGCAAACTTGTAGTACTACCTACTC | 58.082 | 40.000 | 26.41 | 12.24 | 38.49 | 2.59 |
94 | 95 | 9.824216 | TGAGGGAATTAATACTATAGCACTACT | 57.176 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
175 | 176 | 2.235016 | AGCAAAGTTTACGCCCAATCA | 58.765 | 42.857 | 0.00 | 0.00 | 0.00 | 2.57 |
176 | 177 | 4.428615 | TTAGCAAAGTTTACGCCCAATC | 57.571 | 40.909 | 0.00 | 0.00 | 0.00 | 2.67 |
179 | 180 | 3.057876 | CACATTAGCAAAGTTTACGCCCA | 60.058 | 43.478 | 0.00 | 0.00 | 0.00 | 5.36 |
180 | 181 | 3.498082 | CACATTAGCAAAGTTTACGCCC | 58.502 | 45.455 | 0.00 | 0.00 | 0.00 | 6.13 |
237 | 239 | 6.491383 | TCTGGTCACCTACATACTACTTTCT | 58.509 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
258 | 260 | 0.872388 | GTGCCGTAGTTGGGTTTCTG | 59.128 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
305 | 307 | 5.220931 | GCTTTATTAGGTGTTGCATCCTCTG | 60.221 | 44.000 | 8.54 | 0.00 | 35.51 | 3.35 |
349 | 352 | 7.750903 | GCTTTATTTGCTGTTTCCACTACTTAG | 59.249 | 37.037 | 0.00 | 0.00 | 0.00 | 2.18 |
549 | 557 | 4.610605 | TTTGAGTTAGTGTTCATCCGGA | 57.389 | 40.909 | 6.61 | 6.61 | 0.00 | 5.14 |
561 | 569 | 6.401153 | GCATCGTACCACTTCTTTTGAGTTAG | 60.401 | 42.308 | 0.00 | 0.00 | 0.00 | 2.34 |
576 | 584 | 5.705441 | AGAATTTCTTGAAAGCATCGTACCA | 59.295 | 36.000 | 2.25 | 0.00 | 0.00 | 3.25 |
581 | 589 | 7.807687 | AATTCAGAATTTCTTGAAAGCATCG | 57.192 | 32.000 | 2.20 | 0.00 | 0.00 | 3.84 |
612 | 620 | 3.660904 | GCGACACTAACACGAACATTCAC | 60.661 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
637 | 645 | 6.741992 | TCGTCTGAAAATTATCAAGCATGT | 57.258 | 33.333 | 0.00 | 0.00 | 0.00 | 3.21 |
647 | 655 | 4.059511 | TGCTCCGTTTCGTCTGAAAATTA | 58.940 | 39.130 | 0.00 | 0.00 | 45.22 | 1.40 |
656 | 664 | 1.335689 | ACACTACTGCTCCGTTTCGTC | 60.336 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
691 | 699 | 6.183361 | ACCCCAAATGTTATCCCAAATTTGTT | 60.183 | 34.615 | 16.73 | 4.40 | 38.00 | 2.83 |
703 | 711 | 9.634021 | AACAACAAATTAAACCCCAAATGTTAT | 57.366 | 25.926 | 0.00 | 0.00 | 0.00 | 1.89 |
735 | 743 | 4.064388 | AGGTTAAACATTTTGGCATGTGC | 58.936 | 39.130 | 0.00 | 0.00 | 37.46 | 4.57 |
736 | 744 | 6.616774 | AAAGGTTAAACATTTTGGCATGTG | 57.383 | 33.333 | 0.00 | 0.00 | 37.46 | 3.21 |
748 | 756 | 8.184848 | GCAAAATTTTAGGCAAAAGGTTAAACA | 58.815 | 29.630 | 2.44 | 0.00 | 37.08 | 2.83 |
749 | 757 | 8.184848 | TGCAAAATTTTAGGCAAAAGGTTAAAC | 58.815 | 29.630 | 12.16 | 0.00 | 37.08 | 2.01 |
752 | 760 | 6.484977 | CCTGCAAAATTTTAGGCAAAAGGTTA | 59.515 | 34.615 | 14.62 | 0.00 | 37.08 | 2.85 |
754 | 762 | 4.821260 | CCTGCAAAATTTTAGGCAAAAGGT | 59.179 | 37.500 | 14.62 | 0.00 | 37.08 | 3.50 |
755 | 763 | 4.821260 | ACCTGCAAAATTTTAGGCAAAAGG | 59.179 | 37.500 | 16.50 | 15.03 | 37.08 | 3.11 |
756 | 764 | 6.347644 | GCTACCTGCAAAATTTTAGGCAAAAG | 60.348 | 38.462 | 16.50 | 13.42 | 42.31 | 2.27 |
844 | 852 | 1.750206 | TGGCTTGCGCATGAAATATGT | 59.250 | 42.857 | 25.77 | 0.00 | 38.10 | 2.29 |
848 | 856 | 2.389962 | ATTTGGCTTGCGCATGAAAT | 57.610 | 40.000 | 25.77 | 18.87 | 38.10 | 2.17 |
853 | 861 | 0.538118 | ATCCAATTTGGCTTGCGCAT | 59.462 | 45.000 | 12.75 | 0.00 | 37.47 | 4.73 |
854 | 862 | 0.321021 | AATCCAATTTGGCTTGCGCA | 59.679 | 45.000 | 5.66 | 5.66 | 37.47 | 6.09 |
856 | 864 | 2.001872 | GGAAATCCAATTTGGCTTGCG | 58.998 | 47.619 | 10.76 | 0.00 | 37.47 | 4.85 |
861 | 869 | 3.442273 | TGTAGTCGGAAATCCAATTTGGC | 59.558 | 43.478 | 10.76 | 0.00 | 37.47 | 4.52 |
862 | 870 | 5.356751 | TGATGTAGTCGGAAATCCAATTTGG | 59.643 | 40.000 | 9.28 | 9.28 | 39.43 | 3.28 |
870 | 878 | 6.422776 | AATTGTGTGATGTAGTCGGAAATC | 57.577 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
875 | 883 | 7.129109 | AGTTTTAATTGTGTGATGTAGTCGG | 57.871 | 36.000 | 0.00 | 0.00 | 0.00 | 4.79 |
876 | 884 | 8.067784 | ACAAGTTTTAATTGTGTGATGTAGTCG | 58.932 | 33.333 | 0.00 | 0.00 | 39.36 | 4.18 |
877 | 885 | 9.730420 | AACAAGTTTTAATTGTGTGATGTAGTC | 57.270 | 29.630 | 0.00 | 0.00 | 39.91 | 2.59 |
921 | 931 | 3.334691 | TCAGCCGTCCAAATAGAAGTTG | 58.665 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
947 | 981 | 3.477346 | GTAGGCGGGAAGGGGGTC | 61.477 | 72.222 | 0.00 | 0.00 | 0.00 | 4.46 |
948 | 982 | 3.876255 | TTGTAGGCGGGAAGGGGGT | 62.876 | 63.158 | 0.00 | 0.00 | 0.00 | 4.95 |
1016 | 1358 | 3.742640 | GCTTCCTAGCTGGATTGTGTAGG | 60.743 | 52.174 | 0.00 | 0.00 | 45.68 | 3.18 |
1049 | 1398 | 0.817654 | ATCGGTGAAGATCGCAGTGA | 59.182 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1100 | 1481 | 1.191944 | CACCGTCATCTCGAACGATG | 58.808 | 55.000 | 8.86 | 8.43 | 41.64 | 3.84 |
1146 | 1535 | 2.041686 | GTGAGGAGGAGCGACGTCT | 61.042 | 63.158 | 14.70 | 0.00 | 34.32 | 4.18 |
1470 | 1898 | 4.021544 | GTCTCTTCCTGCTCTTCTTCTTCA | 60.022 | 45.833 | 0.00 | 0.00 | 0.00 | 3.02 |
1653 | 2105 | 3.491598 | CTGGGGTTTCGTGGCCACT | 62.492 | 63.158 | 32.28 | 0.00 | 0.00 | 4.00 |
1665 | 2117 | 1.004361 | GTGGAGGTATCCCTGGGGT | 59.996 | 63.158 | 14.00 | 8.72 | 46.04 | 4.95 |
1710 | 2162 | 1.813786 | GAGTAGTCCACGAAGCAGAGT | 59.186 | 52.381 | 0.00 | 0.00 | 0.00 | 3.24 |
1753 | 2277 | 1.849975 | ATGCTCTGCTTCTGGTGGCT | 61.850 | 55.000 | 0.00 | 0.00 | 0.00 | 4.75 |
1809 | 2360 | 5.312079 | ACTTCTTCAACATCCTTCTCTTGG | 58.688 | 41.667 | 0.00 | 0.00 | 0.00 | 3.61 |
1855 | 2427 | 0.033991 | TCGTCCTCCTCCTTCTCCAG | 60.034 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1861 | 2439 | 1.305381 | CCACCTCGTCCTCCTCCTT | 60.305 | 63.158 | 0.00 | 0.00 | 0.00 | 3.36 |
2041 | 2625 | 0.804933 | GTCGGAGCGGCTAATTCGTT | 60.805 | 55.000 | 0.60 | 0.00 | 0.00 | 3.85 |
2265 | 2870 | 1.251527 | ACTCCACGATGAAGAGCGGT | 61.252 | 55.000 | 0.00 | 0.00 | 34.48 | 5.68 |
2329 | 2936 | 3.378742 | ACAATACAAAATTGGCGGCGATA | 59.621 | 39.130 | 12.98 | 0.00 | 33.56 | 2.92 |
2368 | 3058 | 5.171337 | CACAACAAGACGATTAACAAACTGC | 59.829 | 40.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2443 | 3432 | 8.494016 | AAAGACAAATATTTAGGAACGGAGAG | 57.506 | 34.615 | 0.00 | 0.00 | 0.00 | 3.20 |
2444 | 3433 | 8.319146 | AGAAAGACAAATATTTAGGAACGGAGA | 58.681 | 33.333 | 0.00 | 0.00 | 0.00 | 3.71 |
2445 | 3434 | 8.494016 | AGAAAGACAAATATTTAGGAACGGAG | 57.506 | 34.615 | 0.00 | 0.00 | 0.00 | 4.63 |
2475 | 3464 | 9.577110 | TTCGTATTTAGTCACTCGTTGAAATAT | 57.423 | 29.630 | 0.00 | 0.00 | 35.39 | 1.28 |
2476 | 3465 | 8.969121 | TTCGTATTTAGTCACTCGTTGAAATA | 57.031 | 30.769 | 0.00 | 0.00 | 35.39 | 1.40 |
2477 | 3466 | 7.878477 | TTCGTATTTAGTCACTCGTTGAAAT | 57.122 | 32.000 | 0.00 | 0.00 | 35.39 | 2.17 |
2478 | 3467 | 7.648908 | TCTTTCGTATTTAGTCACTCGTTGAAA | 59.351 | 33.333 | 0.00 | 0.00 | 35.39 | 2.69 |
2479 | 3468 | 7.140705 | TCTTTCGTATTTAGTCACTCGTTGAA | 58.859 | 34.615 | 0.00 | 0.00 | 35.39 | 2.69 |
2480 | 3469 | 6.671190 | TCTTTCGTATTTAGTCACTCGTTGA | 58.329 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2481 | 3470 | 6.922980 | TCTTTCGTATTTAGTCACTCGTTG | 57.077 | 37.500 | 0.00 | 0.00 | 0.00 | 4.10 |
2482 | 3471 | 7.935338 | TTTCTTTCGTATTTAGTCACTCGTT | 57.065 | 32.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2483 | 3472 | 7.811236 | TCATTTCTTTCGTATTTAGTCACTCGT | 59.189 | 33.333 | 0.00 | 0.00 | 0.00 | 4.18 |
2484 | 3473 | 8.169839 | TCATTTCTTTCGTATTTAGTCACTCG | 57.830 | 34.615 | 0.00 | 0.00 | 0.00 | 4.18 |
2485 | 3474 | 9.141400 | ACTCATTTCTTTCGTATTTAGTCACTC | 57.859 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
2486 | 3475 | 8.926710 | CACTCATTTCTTTCGTATTTAGTCACT | 58.073 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
2487 | 3476 | 8.922676 | TCACTCATTTCTTTCGTATTTAGTCAC | 58.077 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
2488 | 3477 | 9.483916 | TTCACTCATTTCTTTCGTATTTAGTCA | 57.516 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
2494 | 3483 | 9.653287 | TGTAGATTCACTCATTTCTTTCGTATT | 57.347 | 29.630 | 0.00 | 0.00 | 0.00 | 1.89 |
2495 | 3484 | 9.088512 | GTGTAGATTCACTCATTTCTTTCGTAT | 57.911 | 33.333 | 0.00 | 0.00 | 35.68 | 3.06 |
2496 | 3485 | 8.304596 | AGTGTAGATTCACTCATTTCTTTCGTA | 58.695 | 33.333 | 0.00 | 0.00 | 44.07 | 3.43 |
2497 | 3486 | 7.155328 | AGTGTAGATTCACTCATTTCTTTCGT | 58.845 | 34.615 | 0.00 | 0.00 | 44.07 | 3.85 |
2498 | 3487 | 7.588143 | AGTGTAGATTCACTCATTTCTTTCG | 57.412 | 36.000 | 0.00 | 0.00 | 44.07 | 3.46 |
2542 | 3531 | 9.996554 | TTCAAATGGACTATCACATACGAATAT | 57.003 | 29.630 | 0.00 | 0.00 | 0.00 | 1.28 |
2543 | 3532 | 9.825109 | TTTCAAATGGACTATCACATACGAATA | 57.175 | 29.630 | 0.00 | 0.00 | 0.00 | 1.75 |
2544 | 3533 | 8.731275 | TTTCAAATGGACTATCACATACGAAT | 57.269 | 30.769 | 0.00 | 0.00 | 0.00 | 3.34 |
2545 | 3534 | 8.611757 | CATTTCAAATGGACTATCACATACGAA | 58.388 | 33.333 | 1.73 | 0.00 | 0.00 | 3.85 |
2546 | 3535 | 7.984617 | TCATTTCAAATGGACTATCACATACGA | 59.015 | 33.333 | 10.30 | 0.00 | 0.00 | 3.43 |
2547 | 3536 | 8.064222 | GTCATTTCAAATGGACTATCACATACG | 58.936 | 37.037 | 10.30 | 0.00 | 0.00 | 3.06 |
2548 | 3537 | 9.113838 | AGTCATTTCAAATGGACTATCACATAC | 57.886 | 33.333 | 10.30 | 0.00 | 38.74 | 2.39 |
2550 | 3539 | 9.857656 | ATAGTCATTTCAAATGGACTATCACAT | 57.142 | 29.630 | 19.32 | 8.17 | 45.59 | 3.21 |
2557 | 3546 | 9.739276 | TGTCTTTATAGTCATTTCAAATGGACT | 57.261 | 29.630 | 10.30 | 13.37 | 42.76 | 3.85 |
2575 | 3564 | 9.338622 | CCTCCGTTCCTAAATATTTGTCTTTAT | 57.661 | 33.333 | 11.05 | 0.00 | 0.00 | 1.40 |
2576 | 3565 | 7.771826 | CCCTCCGTTCCTAAATATTTGTCTTTA | 59.228 | 37.037 | 11.05 | 0.00 | 0.00 | 1.85 |
2577 | 3566 | 6.602009 | CCCTCCGTTCCTAAATATTTGTCTTT | 59.398 | 38.462 | 11.05 | 0.00 | 0.00 | 2.52 |
2578 | 3567 | 6.069847 | TCCCTCCGTTCCTAAATATTTGTCTT | 60.070 | 38.462 | 11.05 | 0.00 | 0.00 | 3.01 |
2579 | 3568 | 5.427481 | TCCCTCCGTTCCTAAATATTTGTCT | 59.573 | 40.000 | 11.05 | 0.00 | 0.00 | 3.41 |
2580 | 3569 | 5.677567 | TCCCTCCGTTCCTAAATATTTGTC | 58.322 | 41.667 | 11.05 | 0.00 | 0.00 | 3.18 |
2581 | 3570 | 5.191124 | ACTCCCTCCGTTCCTAAATATTTGT | 59.809 | 40.000 | 11.05 | 0.00 | 0.00 | 2.83 |
2582 | 3571 | 5.681639 | ACTCCCTCCGTTCCTAAATATTTG | 58.318 | 41.667 | 11.05 | 1.40 | 0.00 | 2.32 |
2583 | 3572 | 5.970501 | ACTCCCTCCGTTCCTAAATATTT | 57.029 | 39.130 | 5.89 | 5.89 | 0.00 | 1.40 |
2584 | 3573 | 5.901276 | TGTACTCCCTCCGTTCCTAAATATT | 59.099 | 40.000 | 0.00 | 0.00 | 0.00 | 1.28 |
2585 | 3574 | 5.461327 | TGTACTCCCTCCGTTCCTAAATAT | 58.539 | 41.667 | 0.00 | 0.00 | 0.00 | 1.28 |
2586 | 3575 | 4.870636 | TGTACTCCCTCCGTTCCTAAATA | 58.129 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
2587 | 3576 | 3.716431 | TGTACTCCCTCCGTTCCTAAAT | 58.284 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
2588 | 3577 | 3.173953 | TGTACTCCCTCCGTTCCTAAA | 57.826 | 47.619 | 0.00 | 0.00 | 0.00 | 1.85 |
2589 | 3578 | 2.905415 | TGTACTCCCTCCGTTCCTAA | 57.095 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2590 | 3579 | 3.393426 | AATGTACTCCCTCCGTTCCTA | 57.607 | 47.619 | 0.00 | 0.00 | 0.00 | 2.94 |
2591 | 3580 | 2.249309 | AATGTACTCCCTCCGTTCCT | 57.751 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2592 | 3581 | 2.762327 | TGTAATGTACTCCCTCCGTTCC | 59.238 | 50.000 | 0.00 | 0.00 | 0.00 | 3.62 |
2593 | 3582 | 4.667519 | ATGTAATGTACTCCCTCCGTTC | 57.332 | 45.455 | 0.00 | 0.00 | 0.00 | 3.95 |
2594 | 3583 | 4.383770 | CCAATGTAATGTACTCCCTCCGTT | 60.384 | 45.833 | 0.00 | 0.00 | 0.00 | 4.44 |
2595 | 3584 | 3.134081 | CCAATGTAATGTACTCCCTCCGT | 59.866 | 47.826 | 0.00 | 0.00 | 0.00 | 4.69 |
2596 | 3585 | 3.134081 | ACCAATGTAATGTACTCCCTCCG | 59.866 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
2597 | 3586 | 4.772886 | ACCAATGTAATGTACTCCCTCC | 57.227 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
2770 | 3761 | 7.128077 | ACATGATTTGGAGACCATAGGAAAAT | 58.872 | 34.615 | 0.00 | 0.00 | 31.53 | 1.82 |
2821 | 3843 | 3.492102 | ACAAGTGCTGCTTTCCTCTTA | 57.508 | 42.857 | 0.00 | 0.00 | 34.69 | 2.10 |
2870 | 3892 | 3.637694 | TGAGCAAGAGATCAGAGATCCTG | 59.362 | 47.826 | 3.52 | 5.18 | 44.27 | 3.86 |
2935 | 3957 | 1.899814 | GGCCACGATCATCATAGGGTA | 59.100 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
2967 | 3989 | 2.375174 | ACCAAGCAGTCAAGGGATTACA | 59.625 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
3018 | 4043 | 0.692419 | CTCCCCACTATGACCAGCCT | 60.692 | 60.000 | 0.00 | 0.00 | 0.00 | 4.58 |
3019 | 4044 | 0.983378 | ACTCCCCACTATGACCAGCC | 60.983 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
3020 | 4045 | 1.789523 | TACTCCCCACTATGACCAGC | 58.210 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
3021 | 4046 | 3.375699 | AGTTACTCCCCACTATGACCAG | 58.624 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3022 | 4047 | 3.484953 | AGTTACTCCCCACTATGACCA | 57.515 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
3023 | 4048 | 5.068855 | GTCTAAGTTACTCCCCACTATGACC | 59.931 | 48.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3024 | 4049 | 5.892686 | AGTCTAAGTTACTCCCCACTATGAC | 59.107 | 44.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3025 | 4050 | 6.088541 | AGTCTAAGTTACTCCCCACTATGA | 57.911 | 41.667 | 0.00 | 0.00 | 0.00 | 2.15 |
3026 | 4051 | 7.013464 | CACTAGTCTAAGTTACTCCCCACTATG | 59.987 | 44.444 | 0.00 | 0.00 | 0.00 | 2.23 |
3027 | 4052 | 7.061688 | CACTAGTCTAAGTTACTCCCCACTAT | 58.938 | 42.308 | 0.00 | 0.00 | 0.00 | 2.12 |
3028 | 4053 | 6.012157 | ACACTAGTCTAAGTTACTCCCCACTA | 60.012 | 42.308 | 0.00 | 0.00 | 0.00 | 2.74 |
3029 | 4054 | 5.222296 | ACACTAGTCTAAGTTACTCCCCACT | 60.222 | 44.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3030 | 4055 | 5.015515 | ACACTAGTCTAAGTTACTCCCCAC | 58.984 | 45.833 | 0.00 | 0.00 | 0.00 | 4.61 |
3031 | 4056 | 5.222192 | TGACACTAGTCTAAGTTACTCCCCA | 60.222 | 44.000 | 0.00 | 0.00 | 45.20 | 4.96 |
3032 | 4057 | 5.259632 | TGACACTAGTCTAAGTTACTCCCC | 58.740 | 45.833 | 0.00 | 0.00 | 45.20 | 4.81 |
3033 | 4058 | 6.680872 | GCATGACACTAGTCTAAGTTACTCCC | 60.681 | 46.154 | 0.00 | 0.00 | 45.20 | 4.30 |
3034 | 4059 | 6.267070 | GCATGACACTAGTCTAAGTTACTCC | 58.733 | 44.000 | 0.00 | 0.00 | 45.20 | 3.85 |
3035 | 4060 | 5.966503 | CGCATGACACTAGTCTAAGTTACTC | 59.033 | 44.000 | 0.00 | 0.00 | 45.20 | 2.59 |
3036 | 4061 | 5.415077 | ACGCATGACACTAGTCTAAGTTACT | 59.585 | 40.000 | 0.00 | 0.00 | 45.20 | 2.24 |
3037 | 4062 | 5.638783 | ACGCATGACACTAGTCTAAGTTAC | 58.361 | 41.667 | 0.00 | 0.00 | 45.20 | 2.50 |
3038 | 4063 | 5.892160 | ACGCATGACACTAGTCTAAGTTA | 57.108 | 39.130 | 0.00 | 0.00 | 45.20 | 2.24 |
3039 | 4064 | 4.785511 | ACGCATGACACTAGTCTAAGTT | 57.214 | 40.909 | 0.00 | 0.00 | 45.20 | 2.66 |
3040 | 4065 | 5.589050 | TCATACGCATGACACTAGTCTAAGT | 59.411 | 40.000 | 0.00 | 0.00 | 45.20 | 2.24 |
3041 | 4066 | 6.061231 | TCATACGCATGACACTAGTCTAAG | 57.939 | 41.667 | 0.00 | 0.00 | 45.20 | 2.18 |
3053 | 4078 | 5.324784 | ACTTAGAAGTGTCATACGCATGA | 57.675 | 39.130 | 0.00 | 0.00 | 37.03 | 3.07 |
3054 | 4079 | 6.752351 | AGTAACTTAGAAGTGTCATACGCATG | 59.248 | 38.462 | 0.00 | 0.00 | 39.66 | 4.06 |
3055 | 4080 | 6.864342 | AGTAACTTAGAAGTGTCATACGCAT | 58.136 | 36.000 | 0.00 | 0.00 | 39.66 | 4.73 |
3056 | 4081 | 6.263516 | AGTAACTTAGAAGTGTCATACGCA | 57.736 | 37.500 | 0.00 | 0.00 | 39.66 | 5.24 |
3057 | 4082 | 8.344098 | AGATAGTAACTTAGAAGTGTCATACGC | 58.656 | 37.037 | 0.00 | 0.00 | 39.66 | 4.42 |
3058 | 4083 | 9.866936 | GAGATAGTAACTTAGAAGTGTCATACG | 57.133 | 37.037 | 0.00 | 0.00 | 39.66 | 3.06 |
3060 | 4085 | 9.916360 | TGGAGATAGTAACTTAGAAGTGTCATA | 57.084 | 33.333 | 0.00 | 0.00 | 39.66 | 2.15 |
3061 | 4086 | 8.824756 | TGGAGATAGTAACTTAGAAGTGTCAT | 57.175 | 34.615 | 0.00 | 0.00 | 39.66 | 3.06 |
3062 | 4087 | 8.824756 | ATGGAGATAGTAACTTAGAAGTGTCA | 57.175 | 34.615 | 0.00 | 0.00 | 39.66 | 3.58 |
3064 | 4089 | 9.924010 | ACTATGGAGATAGTAACTTAGAAGTGT | 57.076 | 33.333 | 0.00 | 0.00 | 42.61 | 3.55 |
3066 | 4091 | 8.852135 | GCACTATGGAGATAGTAACTTAGAAGT | 58.148 | 37.037 | 0.00 | 0.00 | 42.55 | 3.01 |
3067 | 4092 | 8.851145 | TGCACTATGGAGATAGTAACTTAGAAG | 58.149 | 37.037 | 0.00 | 0.00 | 42.55 | 2.85 |
3068 | 4093 | 8.762481 | TGCACTATGGAGATAGTAACTTAGAA | 57.238 | 34.615 | 0.00 | 0.00 | 42.55 | 2.10 |
3069 | 4094 | 8.762481 | TTGCACTATGGAGATAGTAACTTAGA | 57.238 | 34.615 | 0.00 | 0.00 | 42.55 | 2.10 |
3070 | 4095 | 9.469807 | CTTTGCACTATGGAGATAGTAACTTAG | 57.530 | 37.037 | 0.00 | 0.00 | 42.55 | 2.18 |
3071 | 4096 | 8.978472 | ACTTTGCACTATGGAGATAGTAACTTA | 58.022 | 33.333 | 0.00 | 0.00 | 42.55 | 2.24 |
3072 | 4097 | 7.852263 | ACTTTGCACTATGGAGATAGTAACTT | 58.148 | 34.615 | 0.00 | 0.00 | 42.55 | 2.66 |
3073 | 4098 | 7.425224 | ACTTTGCACTATGGAGATAGTAACT | 57.575 | 36.000 | 0.00 | 0.00 | 42.55 | 2.24 |
3074 | 4099 | 9.765795 | ATTACTTTGCACTATGGAGATAGTAAC | 57.234 | 33.333 | 0.00 | 0.00 | 42.55 | 2.50 |
3103 | 4128 | 9.672673 | AATGAAGCAATTTATGACACTAGTACT | 57.327 | 29.630 | 0.00 | 0.00 | 0.00 | 2.73 |
3120 | 4145 | 9.265901 | GAGTCTATGAGCTAATAAATGAAGCAA | 57.734 | 33.333 | 0.00 | 0.00 | 38.75 | 3.91 |
3121 | 4146 | 8.424133 | TGAGTCTATGAGCTAATAAATGAAGCA | 58.576 | 33.333 | 0.00 | 0.00 | 38.75 | 3.91 |
3122 | 4147 | 8.824159 | TGAGTCTATGAGCTAATAAATGAAGC | 57.176 | 34.615 | 0.00 | 0.00 | 36.48 | 3.86 |
3149 | 4174 | 1.939934 | CATAGCGCATCCCGAGAAAAA | 59.060 | 47.619 | 11.47 | 0.00 | 40.02 | 1.94 |
3150 | 4175 | 1.134521 | ACATAGCGCATCCCGAGAAAA | 60.135 | 47.619 | 11.47 | 0.00 | 40.02 | 2.29 |
3151 | 4176 | 0.464036 | ACATAGCGCATCCCGAGAAA | 59.536 | 50.000 | 11.47 | 0.00 | 40.02 | 2.52 |
3154 | 4179 | 2.370281 | ATAACATAGCGCATCCCGAG | 57.630 | 50.000 | 11.47 | 0.00 | 40.02 | 4.63 |
3155 | 4180 | 2.823747 | ACTATAACATAGCGCATCCCGA | 59.176 | 45.455 | 11.47 | 0.00 | 40.02 | 5.14 |
3156 | 4181 | 3.232213 | ACTATAACATAGCGCATCCCG | 57.768 | 47.619 | 11.47 | 0.00 | 40.75 | 5.14 |
3157 | 4182 | 5.475719 | TGTTACTATAACATAGCGCATCCC | 58.524 | 41.667 | 11.47 | 0.00 | 0.00 | 3.85 |
3158 | 4183 | 8.873215 | ATATGTTACTATAACATAGCGCATCC | 57.127 | 34.615 | 20.33 | 0.00 | 43.73 | 3.51 |
3183 | 4208 | 5.381757 | AAAGAGGTGCTTGTGGTAACATAA | 58.618 | 37.500 | 0.00 | 0.00 | 46.24 | 1.90 |
3185 | 4210 | 3.821033 | GAAAGAGGTGCTTGTGGTAACAT | 59.179 | 43.478 | 0.00 | 0.00 | 42.99 | 2.71 |
3186 | 4211 | 3.211045 | GAAAGAGGTGCTTGTGGTAACA | 58.789 | 45.455 | 0.00 | 0.00 | 40.32 | 2.41 |
3189 | 4214 | 2.038557 | GAGGAAAGAGGTGCTTGTGGTA | 59.961 | 50.000 | 0.00 | 0.00 | 36.80 | 3.25 |
3190 | 4215 | 0.846693 | AGGAAAGAGGTGCTTGTGGT | 59.153 | 50.000 | 0.00 | 0.00 | 36.80 | 4.16 |
3193 | 4218 | 3.515602 | AATGAGGAAAGAGGTGCTTGT | 57.484 | 42.857 | 0.00 | 0.00 | 36.80 | 3.16 |
3195 | 4220 | 7.406104 | ACTATTTAATGAGGAAAGAGGTGCTT | 58.594 | 34.615 | 0.00 | 0.00 | 38.88 | 3.91 |
3196 | 4221 | 6.963322 | ACTATTTAATGAGGAAAGAGGTGCT | 58.037 | 36.000 | 0.00 | 0.00 | 30.97 | 4.40 |
3199 | 4224 | 6.603599 | GGCAACTATTTAATGAGGAAAGAGGT | 59.396 | 38.462 | 0.00 | 0.00 | 30.97 | 3.85 |
3202 | 4227 | 6.945435 | TGTGGCAACTATTTAATGAGGAAAGA | 59.055 | 34.615 | 0.00 | 0.00 | 37.61 | 2.52 |
3204 | 4229 | 7.716799 | ATGTGGCAACTATTTAATGAGGAAA | 57.283 | 32.000 | 0.00 | 0.00 | 37.61 | 3.13 |
3206 | 4231 | 7.013274 | GCTTATGTGGCAACTATTTAATGAGGA | 59.987 | 37.037 | 0.00 | 0.00 | 37.61 | 3.71 |
3207 | 4232 | 7.141363 | GCTTATGTGGCAACTATTTAATGAGG | 58.859 | 38.462 | 0.00 | 0.00 | 37.61 | 3.86 |
3208 | 4233 | 7.706159 | TGCTTATGTGGCAACTATTTAATGAG | 58.294 | 34.615 | 0.00 | 0.00 | 36.71 | 2.90 |
3220 | 4245 | 8.196771 | CCTAAGATAATTTTGCTTATGTGGCAA | 58.803 | 33.333 | 0.00 | 0.00 | 46.12 | 4.52 |
3221 | 4246 | 7.559533 | TCCTAAGATAATTTTGCTTATGTGGCA | 59.440 | 33.333 | 0.00 | 0.00 | 37.97 | 4.92 |
3222 | 4247 | 7.940850 | TCCTAAGATAATTTTGCTTATGTGGC | 58.059 | 34.615 | 0.00 | 0.00 | 0.00 | 5.01 |
3239 | 4264 | 9.490083 | AGGTAGTAACTTAACACATCCTAAGAT | 57.510 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
3240 | 4265 | 8.890410 | AGGTAGTAACTTAACACATCCTAAGA | 57.110 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
3243 | 4268 | 9.759473 | ACTTAGGTAGTAACTTAACACATCCTA | 57.241 | 33.333 | 0.00 | 0.00 | 34.56 | 2.94 |
3244 | 4269 | 8.661752 | ACTTAGGTAGTAACTTAACACATCCT | 57.338 | 34.615 | 0.00 | 0.00 | 34.56 | 3.24 |
3250 | 4275 | 9.813826 | AGGAGTAACTTAGGTAGTAACTTAACA | 57.186 | 33.333 | 0.00 | 0.00 | 35.54 | 2.41 |
3258 | 4283 | 8.160106 | GCCATAGTAGGAGTAACTTAGGTAGTA | 58.840 | 40.741 | 0.00 | 0.00 | 35.54 | 1.82 |
3259 | 4284 | 7.003482 | GCCATAGTAGGAGTAACTTAGGTAGT | 58.997 | 42.308 | 0.00 | 0.00 | 39.32 | 2.73 |
3261 | 4286 | 7.159201 | AGCCATAGTAGGAGTAACTTAGGTA | 57.841 | 40.000 | 0.00 | 0.00 | 0.00 | 3.08 |
3262 | 4287 | 6.028258 | AGCCATAGTAGGAGTAACTTAGGT | 57.972 | 41.667 | 0.00 | 0.00 | 0.00 | 3.08 |
3263 | 4288 | 6.151480 | GCTAGCCATAGTAGGAGTAACTTAGG | 59.849 | 46.154 | 2.29 | 0.00 | 0.00 | 2.69 |
3265 | 4290 | 6.008960 | GGCTAGCCATAGTAGGAGTAACTTA | 58.991 | 44.000 | 29.33 | 0.00 | 35.81 | 2.24 |
3266 | 4291 | 4.833938 | GGCTAGCCATAGTAGGAGTAACTT | 59.166 | 45.833 | 29.33 | 0.00 | 35.81 | 2.66 |
3267 | 4292 | 4.106663 | AGGCTAGCCATAGTAGGAGTAACT | 59.893 | 45.833 | 34.70 | 5.83 | 38.92 | 2.24 |
3268 | 4293 | 4.409187 | AGGCTAGCCATAGTAGGAGTAAC | 58.591 | 47.826 | 34.70 | 2.35 | 38.92 | 2.50 |
3269 | 4294 | 4.743705 | AGGCTAGCCATAGTAGGAGTAA | 57.256 | 45.455 | 34.70 | 0.00 | 38.92 | 2.24 |
3270 | 4295 | 4.743705 | AAGGCTAGCCATAGTAGGAGTA | 57.256 | 45.455 | 34.70 | 0.00 | 38.92 | 2.59 |
3271 | 4296 | 3.621682 | AAGGCTAGCCATAGTAGGAGT | 57.378 | 47.619 | 34.70 | 7.82 | 38.92 | 3.85 |
3272 | 4297 | 5.020132 | ACATAAGGCTAGCCATAGTAGGAG | 58.980 | 45.833 | 34.70 | 15.94 | 38.92 | 3.69 |
3273 | 4298 | 5.011982 | ACATAAGGCTAGCCATAGTAGGA | 57.988 | 43.478 | 34.70 | 7.99 | 38.92 | 2.94 |
3275 | 4300 | 6.350277 | GGTGTACATAAGGCTAGCCATAGTAG | 60.350 | 46.154 | 34.70 | 21.53 | 38.92 | 2.57 |
3276 | 4301 | 5.479375 | GGTGTACATAAGGCTAGCCATAGTA | 59.521 | 44.000 | 34.70 | 25.27 | 38.92 | 1.82 |
3277 | 4302 | 4.283722 | GGTGTACATAAGGCTAGCCATAGT | 59.716 | 45.833 | 34.70 | 26.23 | 38.92 | 2.12 |
3278 | 4303 | 4.528596 | AGGTGTACATAAGGCTAGCCATAG | 59.471 | 45.833 | 34.70 | 22.33 | 38.92 | 2.23 |
3279 | 4304 | 4.283467 | CAGGTGTACATAAGGCTAGCCATA | 59.717 | 45.833 | 34.70 | 27.54 | 38.92 | 2.74 |
3280 | 4305 | 3.071602 | CAGGTGTACATAAGGCTAGCCAT | 59.928 | 47.826 | 34.70 | 26.20 | 38.92 | 4.40 |
3281 | 4306 | 2.434336 | CAGGTGTACATAAGGCTAGCCA | 59.566 | 50.000 | 34.70 | 16.70 | 38.92 | 4.75 |
3282 | 4307 | 2.807108 | GCAGGTGTACATAAGGCTAGCC | 60.807 | 54.545 | 27.19 | 27.19 | 0.00 | 3.93 |
3283 | 4308 | 2.158957 | TGCAGGTGTACATAAGGCTAGC | 60.159 | 50.000 | 6.04 | 6.04 | 0.00 | 3.42 |
3286 | 4311 | 1.210478 | CCTGCAGGTGTACATAAGGCT | 59.790 | 52.381 | 25.53 | 0.00 | 0.00 | 4.58 |
3287 | 4312 | 1.668419 | CCTGCAGGTGTACATAAGGC | 58.332 | 55.000 | 25.53 | 1.77 | 0.00 | 4.35 |
3288 | 4313 | 1.134098 | CCCCTGCAGGTGTACATAAGG | 60.134 | 57.143 | 30.63 | 17.25 | 0.00 | 2.69 |
3290 | 4315 | 1.663911 | ACCCCTGCAGGTGTACATAA | 58.336 | 50.000 | 30.63 | 0.00 | 39.24 | 1.90 |
3291 | 4316 | 2.394632 | CTACCCCTGCAGGTGTACATA | 58.605 | 52.381 | 30.63 | 10.11 | 41.42 | 2.29 |
3296 | 4321 | 2.529136 | TGCTACCCCTGCAGGTGT | 60.529 | 61.111 | 30.63 | 27.66 | 41.42 | 4.16 |
3297 | 4322 | 2.045926 | GTGCTACCCCTGCAGGTG | 60.046 | 66.667 | 30.63 | 23.08 | 41.42 | 4.00 |
3300 | 4325 | 1.327303 | TTTTTGTGCTACCCCTGCAG | 58.673 | 50.000 | 6.78 | 6.78 | 41.41 | 4.41 |
3329 | 4844 | 1.685765 | TACTGGCAGCTCCCACGAT | 60.686 | 57.895 | 15.89 | 0.00 | 0.00 | 3.73 |
3332 | 4847 | 1.078848 | CAGTACTGGCAGCTCCCAC | 60.079 | 63.158 | 15.89 | 5.11 | 0.00 | 4.61 |
3403 | 5757 | 4.311520 | AACCCCTAAGTACCAATCCAAC | 57.688 | 45.455 | 0.00 | 0.00 | 0.00 | 3.77 |
3439 | 7116 | 1.656652 | CCAGATCCAACGATCCACAC | 58.343 | 55.000 | 0.00 | 0.00 | 45.32 | 3.82 |
3443 | 7120 | 0.533755 | CCTGCCAGATCCAACGATCC | 60.534 | 60.000 | 0.00 | 0.00 | 45.32 | 3.36 |
3451 | 7131 | 1.145819 | GTGCTCTCCTGCCAGATCC | 59.854 | 63.158 | 0.00 | 0.00 | 0.00 | 3.36 |
3468 | 7148 | 5.650703 | GCACCTGGTACATAAAGTAAATGGT | 59.349 | 40.000 | 0.00 | 0.00 | 38.20 | 3.55 |
3475 | 7155 | 6.368779 | TTTCTAGCACCTGGTACATAAAGT | 57.631 | 37.500 | 0.00 | 0.00 | 38.20 | 2.66 |
3479 | 7159 | 4.038763 | CCGATTTCTAGCACCTGGTACATA | 59.961 | 45.833 | 0.00 | 0.00 | 38.20 | 2.29 |
3485 | 7165 | 0.830648 | TCCCGATTTCTAGCACCTGG | 59.169 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
3486 | 7166 | 1.482593 | AGTCCCGATTTCTAGCACCTG | 59.517 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
3580 | 8481 | 8.092687 | TGCTAGTTCCCTTTATATATTTCCGAC | 58.907 | 37.037 | 0.00 | 0.00 | 0.00 | 4.79 |
3688 | 8590 | 7.222417 | TGTCAATTGTTTCAAACACTATGCAAG | 59.778 | 33.333 | 1.28 | 0.00 | 41.97 | 4.01 |
3699 | 8601 | 8.713737 | TCATTCATTGTGTCAATTGTTTCAAA | 57.286 | 26.923 | 5.13 | 0.00 | 0.00 | 2.69 |
3705 | 8607 | 5.466819 | CAGCTCATTCATTGTGTCAATTGT | 58.533 | 37.500 | 5.13 | 0.00 | 0.00 | 2.71 |
3718 | 8620 | 6.345298 | TGTATCGAATTTACCAGCTCATTCA | 58.655 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3770 | 8678 | 0.390492 | TACATGCATGAGGAGAGCCG | 59.610 | 55.000 | 32.75 | 2.55 | 39.96 | 5.52 |
3779 | 8687 | 3.345414 | TGCAGTGTTCATACATGCATGA | 58.655 | 40.909 | 32.75 | 16.49 | 40.51 | 3.07 |
3807 | 8715 | 2.307098 | AGGGACTCCAAGACAATCCAAG | 59.693 | 50.000 | 0.00 | 0.00 | 34.83 | 3.61 |
3876 | 8809 | 4.335315 | GGCACGTCTAATTCATTGGAATGA | 59.665 | 41.667 | 0.00 | 0.00 | 42.87 | 2.57 |
3923 | 8857 | 5.878669 | CCCACATTTACTTGGTCTAACTACC | 59.121 | 44.000 | 0.00 | 0.00 | 40.19 | 3.18 |
3927 | 8861 | 7.933215 | ATAACCCACATTTACTTGGTCTAAC | 57.067 | 36.000 | 0.00 | 0.00 | 0.00 | 2.34 |
4097 | 9194 | 4.465660 | AGAACATGCATGTGTACTCTCTCT | 59.534 | 41.667 | 31.98 | 23.39 | 41.61 | 3.10 |
4107 | 12404 | 6.667370 | TGTGTAGTTAAAGAACATGCATGTG | 58.333 | 36.000 | 31.98 | 9.68 | 41.61 | 3.21 |
4109 | 12406 | 8.572828 | TTTTGTGTAGTTAAAGAACATGCATG | 57.427 | 30.769 | 25.09 | 25.09 | 38.10 | 4.06 |
4159 | 12456 | 7.503902 | GGGAAGCAAGTGAATAAAAGGATATCT | 59.496 | 37.037 | 2.05 | 0.00 | 0.00 | 1.98 |
4160 | 12457 | 7.503902 | AGGGAAGCAAGTGAATAAAAGGATATC | 59.496 | 37.037 | 0.00 | 0.00 | 0.00 | 1.63 |
4161 | 12458 | 7.357471 | AGGGAAGCAAGTGAATAAAAGGATAT | 58.643 | 34.615 | 0.00 | 0.00 | 0.00 | 1.63 |
4162 | 12459 | 6.731467 | AGGGAAGCAAGTGAATAAAAGGATA | 58.269 | 36.000 | 0.00 | 0.00 | 0.00 | 2.59 |
4163 | 12460 | 5.583932 | AGGGAAGCAAGTGAATAAAAGGAT | 58.416 | 37.500 | 0.00 | 0.00 | 0.00 | 3.24 |
4164 | 12461 | 4.998051 | AGGGAAGCAAGTGAATAAAAGGA | 58.002 | 39.130 | 0.00 | 0.00 | 0.00 | 3.36 |
4165 | 12462 | 4.158579 | GGAGGGAAGCAAGTGAATAAAAGG | 59.841 | 45.833 | 0.00 | 0.00 | 0.00 | 3.11 |
4166 | 12463 | 4.142600 | CGGAGGGAAGCAAGTGAATAAAAG | 60.143 | 45.833 | 0.00 | 0.00 | 0.00 | 2.27 |
4167 | 12464 | 3.756434 | CGGAGGGAAGCAAGTGAATAAAA | 59.244 | 43.478 | 0.00 | 0.00 | 0.00 | 1.52 |
4168 | 12465 | 3.244770 | ACGGAGGGAAGCAAGTGAATAAA | 60.245 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
4169 | 12466 | 2.304761 | ACGGAGGGAAGCAAGTGAATAA | 59.695 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
4170 | 12467 | 1.906574 | ACGGAGGGAAGCAAGTGAATA | 59.093 | 47.619 | 0.00 | 0.00 | 0.00 | 1.75 |
4171 | 12468 | 0.693049 | ACGGAGGGAAGCAAGTGAAT | 59.307 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
4172 | 12469 | 0.472471 | AACGGAGGGAAGCAAGTGAA | 59.528 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4173 | 12470 | 0.472471 | AAACGGAGGGAAGCAAGTGA | 59.528 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
4174 | 12471 | 0.593128 | CAAACGGAGGGAAGCAAGTG | 59.407 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4175 | 12472 | 1.172812 | GCAAACGGAGGGAAGCAAGT | 61.173 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4176 | 12473 | 1.581447 | GCAAACGGAGGGAAGCAAG | 59.419 | 57.895 | 0.00 | 0.00 | 0.00 | 4.01 |
4177 | 12474 | 2.258013 | CGCAAACGGAGGGAAGCAA | 61.258 | 57.895 | 0.00 | 0.00 | 34.97 | 3.91 |
4178 | 12475 | 2.668212 | CGCAAACGGAGGGAAGCA | 60.668 | 61.111 | 0.00 | 0.00 | 34.97 | 3.91 |
4179 | 12476 | 2.358247 | TCGCAAACGGAGGGAAGC | 60.358 | 61.111 | 0.00 | 0.00 | 40.63 | 3.86 |
4180 | 12477 | 2.391389 | GCTCGCAAACGGAGGGAAG | 61.391 | 63.158 | 0.00 | 0.00 | 40.63 | 3.46 |
4181 | 12478 | 2.358247 | GCTCGCAAACGGAGGGAA | 60.358 | 61.111 | 0.00 | 0.00 | 40.63 | 3.97 |
4182 | 12479 | 3.311110 | AGCTCGCAAACGGAGGGA | 61.311 | 61.111 | 0.00 | 0.00 | 40.63 | 4.20 |
4183 | 12480 | 2.501223 | TACAGCTCGCAAACGGAGGG | 62.501 | 60.000 | 0.00 | 0.00 | 40.63 | 4.30 |
4184 | 12481 | 0.669318 | TTACAGCTCGCAAACGGAGG | 60.669 | 55.000 | 0.00 | 0.00 | 40.63 | 4.30 |
4185 | 12482 | 1.359848 | ATTACAGCTCGCAAACGGAG | 58.640 | 50.000 | 0.00 | 0.00 | 40.63 | 4.63 |
4186 | 12483 | 2.094390 | AGTATTACAGCTCGCAAACGGA | 60.094 | 45.455 | 0.00 | 0.00 | 40.63 | 4.69 |
4187 | 12484 | 2.268298 | AGTATTACAGCTCGCAAACGG | 58.732 | 47.619 | 0.00 | 0.00 | 40.63 | 4.44 |
4188 | 12485 | 3.991605 | AAGTATTACAGCTCGCAAACG | 57.008 | 42.857 | 0.00 | 0.00 | 42.01 | 3.60 |
4189 | 12486 | 5.726679 | CGTAAAAGTATTACAGCTCGCAAAC | 59.273 | 40.000 | 0.00 | 0.00 | 0.00 | 2.93 |
4190 | 12487 | 5.634439 | TCGTAAAAGTATTACAGCTCGCAAA | 59.366 | 36.000 | 0.00 | 0.00 | 0.00 | 3.68 |
4191 | 12488 | 5.061311 | GTCGTAAAAGTATTACAGCTCGCAA | 59.939 | 40.000 | 0.00 | 0.00 | 0.00 | 4.85 |
4192 | 12489 | 4.560035 | GTCGTAAAAGTATTACAGCTCGCA | 59.440 | 41.667 | 0.00 | 0.00 | 0.00 | 5.10 |
4193 | 12490 | 4.797349 | AGTCGTAAAAGTATTACAGCTCGC | 59.203 | 41.667 | 0.00 | 0.00 | 0.00 | 5.03 |
4194 | 12491 | 6.866179 | AAGTCGTAAAAGTATTACAGCTCG | 57.134 | 37.500 | 0.00 | 0.00 | 0.00 | 5.03 |
4195 | 12492 | 7.950496 | CACAAAGTCGTAAAAGTATTACAGCTC | 59.050 | 37.037 | 0.00 | 0.00 | 0.00 | 4.09 |
4196 | 12493 | 7.654520 | TCACAAAGTCGTAAAAGTATTACAGCT | 59.345 | 33.333 | 0.00 | 0.00 | 0.00 | 4.24 |
4197 | 12494 | 7.790000 | TCACAAAGTCGTAAAAGTATTACAGC | 58.210 | 34.615 | 0.00 | 0.00 | 0.00 | 4.40 |
4203 | 12500 | 9.701098 | TGAAGTATCACAAAGTCGTAAAAGTAT | 57.299 | 29.630 | 0.00 | 0.00 | 0.00 | 2.12 |
4204 | 12501 | 9.701098 | ATGAAGTATCACAAAGTCGTAAAAGTA | 57.299 | 29.630 | 0.00 | 0.00 | 38.69 | 2.24 |
4205 | 12502 | 8.495949 | CATGAAGTATCACAAAGTCGTAAAAGT | 58.504 | 33.333 | 0.00 | 0.00 | 38.69 | 2.66 |
4206 | 12503 | 7.957484 | CCATGAAGTATCACAAAGTCGTAAAAG | 59.043 | 37.037 | 0.00 | 0.00 | 38.69 | 2.27 |
4207 | 12504 | 7.442969 | ACCATGAAGTATCACAAAGTCGTAAAA | 59.557 | 33.333 | 0.00 | 0.00 | 38.69 | 1.52 |
4208 | 12505 | 6.932400 | ACCATGAAGTATCACAAAGTCGTAAA | 59.068 | 34.615 | 0.00 | 0.00 | 38.69 | 2.01 |
4209 | 12506 | 6.460781 | ACCATGAAGTATCACAAAGTCGTAA | 58.539 | 36.000 | 0.00 | 0.00 | 38.69 | 3.18 |
4210 | 12507 | 6.032956 | ACCATGAAGTATCACAAAGTCGTA | 57.967 | 37.500 | 0.00 | 0.00 | 38.69 | 3.43 |
4211 | 12508 | 4.894784 | ACCATGAAGTATCACAAAGTCGT | 58.105 | 39.130 | 0.00 | 0.00 | 38.69 | 4.34 |
4212 | 12509 | 5.862924 | AACCATGAAGTATCACAAAGTCG | 57.137 | 39.130 | 0.00 | 0.00 | 38.69 | 4.18 |
4235 | 12532 | 5.975282 | TGCATGCAGCCATCTTATTAAAAA | 58.025 | 33.333 | 18.46 | 0.00 | 44.83 | 1.94 |
4236 | 12533 | 5.595257 | TGCATGCAGCCATCTTATTAAAA | 57.405 | 34.783 | 18.46 | 0.00 | 44.83 | 1.52 |
4237 | 12534 | 5.302313 | TGATGCATGCAGCCATCTTATTAAA | 59.698 | 36.000 | 31.30 | 6.79 | 44.83 | 1.52 |
4238 | 12535 | 4.828387 | TGATGCATGCAGCCATCTTATTAA | 59.172 | 37.500 | 31.30 | 7.33 | 44.83 | 1.40 |
4239 | 12536 | 4.400120 | TGATGCATGCAGCCATCTTATTA | 58.600 | 39.130 | 31.30 | 8.11 | 44.83 | 0.98 |
4240 | 12537 | 3.227614 | TGATGCATGCAGCCATCTTATT | 58.772 | 40.909 | 31.30 | 8.21 | 44.83 | 1.40 |
4241 | 12538 | 2.871453 | TGATGCATGCAGCCATCTTAT | 58.129 | 42.857 | 31.30 | 9.02 | 44.83 | 1.73 |
4242 | 12539 | 2.351706 | TGATGCATGCAGCCATCTTA | 57.648 | 45.000 | 31.30 | 10.43 | 44.83 | 2.10 |
4243 | 12540 | 1.704641 | ATGATGCATGCAGCCATCTT | 58.295 | 45.000 | 31.30 | 16.09 | 44.83 | 2.40 |
4244 | 12541 | 1.704641 | AATGATGCATGCAGCCATCT | 58.295 | 45.000 | 31.30 | 18.87 | 44.83 | 2.90 |
4245 | 12542 | 3.192633 | TCATAATGATGCATGCAGCCATC | 59.807 | 43.478 | 31.30 | 20.98 | 44.83 | 3.51 |
4246 | 12543 | 3.161866 | TCATAATGATGCATGCAGCCAT | 58.838 | 40.909 | 31.30 | 27.32 | 44.83 | 4.40 |
4247 | 12544 | 2.588620 | TCATAATGATGCATGCAGCCA | 58.411 | 42.857 | 31.30 | 26.44 | 44.83 | 4.75 |
4248 | 12545 | 3.511699 | CATCATAATGATGCATGCAGCC | 58.488 | 45.455 | 31.30 | 22.02 | 46.37 | 4.85 |
4258 | 12555 | 2.617276 | CCGGCCTCTGCATCATAATGAT | 60.617 | 50.000 | 0.00 | 0.00 | 37.65 | 2.45 |
4259 | 12556 | 1.271001 | CCGGCCTCTGCATCATAATGA | 60.271 | 52.381 | 0.00 | 0.00 | 40.13 | 2.57 |
4260 | 12557 | 1.162698 | CCGGCCTCTGCATCATAATG | 58.837 | 55.000 | 0.00 | 0.00 | 40.13 | 1.90 |
4261 | 12558 | 0.037303 | CCCGGCCTCTGCATCATAAT | 59.963 | 55.000 | 0.00 | 0.00 | 40.13 | 1.28 |
4262 | 12559 | 1.451504 | CCCGGCCTCTGCATCATAA | 59.548 | 57.895 | 0.00 | 0.00 | 40.13 | 1.90 |
4263 | 12560 | 2.519622 | CCCCGGCCTCTGCATCATA | 61.520 | 63.158 | 0.00 | 0.00 | 40.13 | 2.15 |
4264 | 12561 | 3.882326 | CCCCGGCCTCTGCATCAT | 61.882 | 66.667 | 0.00 | 0.00 | 40.13 | 2.45 |
4267 | 12564 | 4.815973 | TACCCCCGGCCTCTGCAT | 62.816 | 66.667 | 0.00 | 0.00 | 40.13 | 3.96 |
4270 | 12567 | 3.782443 | GTGTACCCCCGGCCTCTG | 61.782 | 72.222 | 0.00 | 0.00 | 0.00 | 3.35 |
4276 | 12573 | 1.568118 | AAATGGAGGTGTACCCCCGG | 61.568 | 60.000 | 0.00 | 0.00 | 36.42 | 5.73 |
4277 | 12574 | 0.107361 | GAAATGGAGGTGTACCCCCG | 60.107 | 60.000 | 0.00 | 0.00 | 36.42 | 5.73 |
4278 | 12575 | 0.257905 | GGAAATGGAGGTGTACCCCC | 59.742 | 60.000 | 0.00 | 0.00 | 36.42 | 5.40 |
4279 | 12576 | 0.996583 | TGGAAATGGAGGTGTACCCC | 59.003 | 55.000 | 0.00 | 0.00 | 36.42 | 4.95 |
4280 | 12577 | 2.891191 | TTGGAAATGGAGGTGTACCC | 57.109 | 50.000 | 0.00 | 0.00 | 36.42 | 3.69 |
4303 | 12600 | 6.265422 | CCCCGCTGAAAAGGATATCTATTTTT | 59.735 | 38.462 | 15.62 | 13.17 | 0.00 | 1.94 |
4304 | 12601 | 5.770162 | CCCCGCTGAAAAGGATATCTATTTT | 59.230 | 40.000 | 14.87 | 14.87 | 0.00 | 1.82 |
4305 | 12602 | 5.073144 | TCCCCGCTGAAAAGGATATCTATTT | 59.927 | 40.000 | 2.05 | 4.51 | 0.00 | 1.40 |
4306 | 12603 | 4.597507 | TCCCCGCTGAAAAGGATATCTATT | 59.402 | 41.667 | 2.05 | 0.00 | 0.00 | 1.73 |
4307 | 12604 | 4.168101 | TCCCCGCTGAAAAGGATATCTAT | 58.832 | 43.478 | 2.05 | 0.00 | 0.00 | 1.98 |
4464 | 12816 | 5.669848 | GCTTGCACTTCAATTCTTAGTCTCG | 60.670 | 44.000 | 0.00 | 0.00 | 33.57 | 4.04 |
4534 | 12886 | 5.862924 | TCCTTTCTTTCTTTGTCTATGCG | 57.137 | 39.130 | 0.00 | 0.00 | 0.00 | 4.73 |
4542 | 12894 | 6.141560 | AGTGCTTCTTCCTTTCTTTCTTTG | 57.858 | 37.500 | 0.00 | 0.00 | 0.00 | 2.77 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.