Multiple sequence alignment - TraesCS4D01G366100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G366100 chr4D 100.000 5137 0 0 1 5137 509832182 509827046 0.000000e+00 9487.0
1 TraesCS4D01G366100 chr4D 82.070 686 93 18 3659 4327 503356348 503355676 4.490000e-155 558.0
2 TraesCS4D01G366100 chr4D 86.040 351 39 5 3259 3608 503357578 503357237 8.130000e-98 368.0
3 TraesCS4D01G366100 chr4D 77.179 390 74 12 3 386 334120973 334121353 4.030000e-51 213.0
4 TraesCS4D01G366100 chr4D 79.283 251 31 11 927 1177 503359346 503359117 6.890000e-34 156.0
5 TraesCS4D01G366100 chr4D 85.600 125 12 3 2257 2381 503358324 503358206 5.400000e-25 126.0
6 TraesCS4D01G366100 chr4D 76.119 268 42 18 1189 1453 503359130 503358882 2.510000e-23 121.0
7 TraesCS4D01G366100 chr4D 94.521 73 1 1 4286 4355 509827858 509827786 5.440000e-20 110.0
8 TraesCS4D01G366100 chr4D 94.521 73 1 1 4325 4397 509827897 509827828 5.440000e-20 110.0
9 TraesCS4D01G366100 chr4D 100.000 36 0 0 4850 4885 509825461 509825496 3.320000e-07 67.6
10 TraesCS4D01G366100 chr4B 90.517 2436 160 38 1896 4291 656900533 656902937 0.000000e+00 3153.0
11 TraesCS4D01G366100 chr4B 84.277 1113 86 38 748 1827 656899436 656900492 0.000000e+00 1003.0
12 TraesCS4D01G366100 chr4B 92.837 363 22 2 1 359 656896992 656897354 1.640000e-144 523.0
13 TraesCS4D01G366100 chr4B 91.870 246 17 3 4793 5037 656903532 656903775 1.770000e-89 340.0
14 TraesCS4D01G366100 chr4B 84.877 324 40 5 3286 3608 648500749 648500434 8.300000e-83 318.0
15 TraesCS4D01G366100 chr4B 77.635 389 76 7 3 387 412110362 412110743 5.180000e-55 226.0
16 TraesCS4D01G366100 chr4B 75.407 553 65 35 909 1453 648502987 648502498 8.720000e-48 202.0
17 TraesCS4D01G366100 chr4B 88.194 144 15 1 2218 2361 648501529 648501388 2.460000e-38 171.0
18 TraesCS4D01G366100 chr5A 91.557 1137 66 8 2478 3603 698639642 698638525 0.000000e+00 1541.0
19 TraesCS4D01G366100 chr5A 91.523 696 44 10 3607 4297 698638397 698637712 0.000000e+00 944.0
20 TraesCS4D01G366100 chr5A 88.983 590 28 10 1896 2479 698640282 698639724 0.000000e+00 695.0
21 TraesCS4D01G366100 chr5A 93.318 449 26 2 1 445 698643071 698642623 0.000000e+00 660.0
22 TraesCS4D01G366100 chr5A 86.364 616 37 22 1054 1661 698641041 698640465 3.380000e-176 628.0
23 TraesCS4D01G366100 chr5A 81.895 591 87 10 3659 4238 687691563 687690982 1.000000e-131 481.0
24 TraesCS4D01G366100 chr5A 93.375 317 15 4 674 986 698641875 698641561 1.010000e-126 464.0
25 TraesCS4D01G366100 chr5A 83.815 346 45 6 3259 3603 687692923 687692588 8.300000e-83 318.0
26 TraesCS4D01G366100 chr5A 90.040 251 17 7 4793 5037 698637089 698636841 8.300000e-83 318.0
27 TraesCS4D01G366100 chr5A 92.661 218 12 2 448 665 698642285 698642072 1.390000e-80 311.0
28 TraesCS4D01G366100 chr5A 89.474 152 9 5 1686 1830 698640471 698640320 8.780000e-43 185.0
29 TraesCS4D01G366100 chr5A 86.111 144 18 1 2218 2361 687693743 687693602 2.480000e-33 154.0
30 TraesCS4D01G366100 chr5A 91.304 92 8 0 1204 1295 687694653 687694562 5.400000e-25 126.0
31 TraesCS4D01G366100 chr5A 85.870 92 12 1 1362 1453 687694521 687694431 4.230000e-16 97.1
32 TraesCS4D01G366100 chr5D 84.518 394 45 8 3257 3646 12871796 12871415 4.860000e-100 375.0
33 TraesCS4D01G366100 chr5D 80.864 162 30 1 171 331 543331062 543331223 5.400000e-25 126.0
34 TraesCS4D01G366100 chr2B 84.062 389 43 9 3263 3646 31630270 31629896 1.760000e-94 357.0
35 TraesCS4D01G366100 chr5B 83.033 389 47 10 3263 3646 170195444 170195070 8.240000e-88 335.0
36 TraesCS4D01G366100 chr5B 79.118 340 59 6 101 436 297977263 297976932 1.860000e-54 224.0
37 TraesCS4D01G366100 chr5B 80.000 165 32 1 171 334 557107147 557107311 2.510000e-23 121.0
38 TraesCS4D01G366100 chr5B 84.746 118 18 0 4428 4545 462328013 462328130 9.040000e-23 119.0
39 TraesCS4D01G366100 chr5B 100.000 28 0 0 1834 1861 458714194 458714221 9.000000e-03 52.8
40 TraesCS4D01G366100 chr4A 84.483 348 42 11 3270 3612 505195756 505196096 2.960000e-87 333.0
41 TraesCS4D01G366100 chr4A 85.000 120 18 0 4428 4547 727413173 727413054 6.990000e-24 122.0
42 TraesCS4D01G366100 chr4A 81.955 133 23 1 4414 4546 650851943 650851812 1.510000e-20 111.0
43 TraesCS4D01G366100 chr4A 81.955 133 23 1 4414 4546 650862107 650861976 1.510000e-20 111.0
44 TraesCS4D01G366100 chr4A 100.000 28 0 0 1834 1861 650469215 650469188 9.000000e-03 52.8
45 TraesCS4D01G366100 chr7A 82.199 382 45 15 3270 3646 498036583 498036946 1.800000e-79 307.0
46 TraesCS4D01G366100 chr7A 100.000 28 0 0 1834 1861 386356773 386356800 9.000000e-03 52.8
47 TraesCS4D01G366100 chr3B 80.605 397 64 10 1 388 132646312 132645920 1.400000e-75 294.0
48 TraesCS4D01G366100 chr3B 77.945 399 65 15 1 388 43613588 43613974 1.440000e-55 228.0
49 TraesCS4D01G366100 chr3B 76.081 393 65 17 41 419 17959806 17960183 1.470000e-40 178.0
50 TraesCS4D01G366100 chr3B 86.207 116 14 2 4427 4541 747704471 747704585 1.940000e-24 124.0
51 TraesCS4D01G366100 chr3B 85.470 117 17 0 4428 4544 20056682 20056566 6.990000e-24 122.0
52 TraesCS4D01G366100 chr3B 85.470 117 17 0 4425 4541 458328364 458328480 6.990000e-24 122.0
53 TraesCS4D01G366100 chr3D 78.750 400 71 11 1 390 83882517 83882912 6.600000e-64 255.0
54 TraesCS4D01G366100 chr3D 100.000 28 0 0 1834 1861 563433433 563433406 9.000000e-03 52.8
55 TraesCS4D01G366100 chr7B 87.069 116 13 2 4426 4540 707719260 707719146 4.170000e-26 130.0
56 TraesCS4D01G366100 chr7D 82.353 136 24 0 4406 4541 489165009 489165144 9.040000e-23 119.0
57 TraesCS4D01G366100 chr6B 100.000 32 0 0 1835 1866 225523047 225523078 5.550000e-05 60.2
58 TraesCS4D01G366100 chr1B 83.929 56 9 0 1834 1889 212414520 212414575 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G366100 chr4D 509827046 509832182 5136 True 9487.000000 9487 100.000000 1 5137 1 chr4D.!!$R1 5136
1 TraesCS4D01G366100 chr4D 503355676 503359346 3670 True 265.800000 558 81.822400 927 4327 5 chr4D.!!$R2 3400
2 TraesCS4D01G366100 chr4B 656896992 656903775 6783 False 1254.750000 3153 89.875250 1 5037 4 chr4B.!!$F2 5036
3 TraesCS4D01G366100 chr4B 648500434 648502987 2553 True 230.333333 318 82.826000 909 3608 3 chr4B.!!$R1 2699
4 TraesCS4D01G366100 chr5A 698636841 698643071 6230 True 638.444444 1541 90.810556 1 5037 9 chr5A.!!$R2 5036
5 TraesCS4D01G366100 chr5A 687690982 687694653 3671 True 235.220000 481 85.799000 1204 4238 5 chr5A.!!$R1 3034

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
49 51 0.177604 TTGTTGGCAAGGCTTGTTGG 59.822 50.0 26.71 3.46 0.00 3.77 F
734 2390 0.307760 GTGGTGGCTCGTCAAACTTG 59.692 55.0 0.00 0.00 0.00 3.16 F
1877 4094 0.106268 TTTGCAAGCTGGTTGGAGGA 60.106 50.0 19.87 8.15 37.84 3.71 F
2976 6071 0.109458 TTTCGTGAGGTCATCGTCCG 60.109 55.0 0.00 0.00 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1858 4075 0.106268 TCCTCCAACCAGCTTGCAAA 60.106 50.0 0.00 0.0 0.00 3.68 R
1949 4189 0.396139 AATACTGGAGTACCGCCCGA 60.396 55.0 0.33 0.0 39.42 5.14 R
3809 8185 0.171903 TAAGCCGCGTCACTAGTTCC 59.828 55.0 4.92 0.0 0.00 3.62 R
4959 9708 0.248907 CGACATGACGGGCTATCGTT 60.249 55.0 9.78 0.0 43.96 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 37 5.181811 TGTGCTTTCTAGATCACCATTGTTG 59.818 40.000 14.04 0.00 0.00 3.33
49 51 0.177604 TTGTTGGCAAGGCTTGTTGG 59.822 50.000 26.71 3.46 0.00 3.77
337 393 5.654603 ACATCATCTTGCACAACATGAAT 57.345 34.783 0.00 0.00 36.17 2.57
351 407 8.350722 GCACAACATGAATATTGAGAATGAGAT 58.649 33.333 0.00 0.00 0.00 2.75
392 448 2.107031 TGATACATCTCCAATGGGGCTG 59.893 50.000 0.74 0.74 36.21 4.85
435 492 8.095792 CAGTCAAATAGGATGCATAGATCTCTT 58.904 37.037 0.00 0.00 0.00 2.85
446 503 5.936372 TGCATAGATCTCTTGTAATGCATCC 59.064 40.000 19.79 0.00 43.32 3.51
452 845 5.164620 TCTCTTGTAATGCATCCAACTCA 57.835 39.130 0.00 0.00 0.00 3.41
464 857 5.477637 TGCATCCAACTCATCAAAATTGAGA 59.522 36.000 7.63 0.00 42.63 3.27
584 977 6.910259 AAACCCTAGGATCCTTGATTTAGT 57.090 37.500 22.03 8.08 0.00 2.24
621 1014 9.890629 TGCAGATTACTATTTTAGTGAATGACT 57.109 29.630 0.00 0.00 39.81 3.41
658 1051 7.285069 TGTATTGTATCTCGAACAAACAAACG 58.715 34.615 5.33 0.00 40.05 3.60
659 1052 5.721876 TTGTATCTCGAACAAACAAACGT 57.278 34.783 0.00 0.00 34.04 3.99
660 1053 5.721876 TGTATCTCGAACAAACAAACGTT 57.278 34.783 0.00 0.00 0.00 3.99
661 1054 5.494618 TGTATCTCGAACAAACAAACGTTG 58.505 37.500 0.00 0.00 0.00 4.10
662 1055 4.868450 ATCTCGAACAAACAAACGTTGA 57.132 36.364 0.00 0.00 0.00 3.18
663 1056 4.253352 TCTCGAACAAACAAACGTTGAG 57.747 40.909 0.00 0.00 0.00 3.02
666 1059 2.793237 CGAACAAACAAACGTTGAGGGG 60.793 50.000 0.00 0.00 0.00 4.79
668 1061 1.746787 ACAAACAAACGTTGAGGGGTC 59.253 47.619 0.00 0.00 0.00 4.46
670 1063 3.207778 CAAACAAACGTTGAGGGGTCTA 58.792 45.455 0.00 0.00 0.00 2.59
672 1065 3.782656 ACAAACGTTGAGGGGTCTATT 57.217 42.857 0.00 0.00 0.00 1.73
708 2364 7.148222 CCTCTATCTATACCGTGGTATTCACTG 60.148 44.444 16.26 5.97 43.94 3.66
713 2369 2.489971 ACCGTGGTATTCACTGTTGTG 58.510 47.619 0.00 0.00 40.17 3.33
734 2390 0.307760 GTGGTGGCTCGTCAAACTTG 59.692 55.000 0.00 0.00 0.00 3.16
763 2464 1.522569 GCTCCGGCCTACAACAGAT 59.477 57.895 0.00 0.00 0.00 2.90
770 2471 2.668279 CGGCCTACAACAGATGTTTTGC 60.668 50.000 0.00 0.00 43.63 3.68
847 2549 1.709203 CGCGTGTACGATGCTATCTTC 59.291 52.381 8.82 0.00 43.02 2.87
925 2637 2.354305 GAACACCGTCGACACGCT 60.354 61.111 17.16 0.00 45.29 5.07
966 2679 1.004560 ACGTCGTCCCGTCTGTCTA 60.005 57.895 0.00 0.00 35.95 2.59
1027 2740 3.839432 GACCTCCGCTTCCCCTCG 61.839 72.222 0.00 0.00 0.00 4.63
1077 3245 3.827898 CTCCTCCTCACGGCGGAC 61.828 72.222 13.24 0.00 39.26 4.79
1178 3352 1.079503 GACTGACTGATTGGTTCGCC 58.920 55.000 0.00 0.00 37.92 5.54
1182 3356 0.804989 GACTGATTGGTTCGCCCTTG 59.195 55.000 0.00 0.00 36.08 3.61
1183 3357 1.244019 ACTGATTGGTTCGCCCTTGC 61.244 55.000 0.00 0.00 36.08 4.01
1201 3375 2.023673 TGCGTGGGATTGATTGATTCC 58.976 47.619 0.00 0.00 0.00 3.01
1202 3376 1.002468 GCGTGGGATTGATTGATTCCG 60.002 52.381 0.00 0.00 0.00 4.30
1328 3509 0.539051 CATCTTCTTCCACGCCCTCT 59.461 55.000 0.00 0.00 0.00 3.69
1384 3575 0.888285 AGCTTGACTTGCTGTGCTCC 60.888 55.000 0.00 0.00 39.56 4.70
1399 3590 1.345741 TGCTCCCTTGTGTTCAGAGAG 59.654 52.381 0.00 0.00 0.00 3.20
1459 3650 2.093764 CCAGGAACAGGTCTGCTTCTAG 60.094 54.545 0.00 0.00 0.00 2.43
1491 3685 6.361481 CAGCACAGTTTTGTCATATTTGTCTG 59.639 38.462 0.00 0.00 34.62 3.51
1549 3744 7.051623 TGTAACTGTTGTAAAATCCACTCACT 58.948 34.615 2.69 0.00 0.00 3.41
1552 3747 7.672983 ACTGTTGTAAAATCCACTCACTATG 57.327 36.000 0.00 0.00 0.00 2.23
1553 3748 7.224297 ACTGTTGTAAAATCCACTCACTATGT 58.776 34.615 0.00 0.00 0.00 2.29
1559 3756 8.908903 TGTAAAATCCACTCACTATGTTGTTTT 58.091 29.630 0.00 0.00 0.00 2.43
1569 3766 4.925054 CACTATGTTGTTTTCCCTTGCATG 59.075 41.667 0.00 0.00 0.00 4.06
1570 3767 4.588528 ACTATGTTGTTTTCCCTTGCATGT 59.411 37.500 0.00 0.00 0.00 3.21
1571 3768 3.451141 TGTTGTTTTCCCTTGCATGTC 57.549 42.857 0.00 0.00 0.00 3.06
1572 3769 2.762887 TGTTGTTTTCCCTTGCATGTCA 59.237 40.909 0.00 0.00 0.00 3.58
1573 3770 3.196469 TGTTGTTTTCCCTTGCATGTCAA 59.804 39.130 0.00 0.00 0.00 3.18
1646 3848 2.761195 GGCGATGCCGTCTTTTCCC 61.761 63.158 0.00 0.00 39.62 3.97
1667 3872 2.763933 CTGCTGTATGCTGGGTAGATG 58.236 52.381 0.00 0.00 43.37 2.90
1739 3950 5.105146 GGTGAAGGAGATGAAAGAGCTAAGA 60.105 44.000 0.00 0.00 0.00 2.10
1811 4025 8.359642 TCCTCCTGTCATTTTGTTTAAGAATTG 58.640 33.333 0.00 0.00 0.00 2.32
1835 4052 9.528489 TTGGTTTTTCAGCTAAATATAGTTCCT 57.472 29.630 0.00 0.00 0.00 3.36
1836 4053 9.174166 TGGTTTTTCAGCTAAATATAGTTCCTC 57.826 33.333 0.00 0.00 0.00 3.71
1837 4054 8.622157 GGTTTTTCAGCTAAATATAGTTCCTCC 58.378 37.037 0.00 0.00 0.00 4.30
1838 4055 8.336080 GTTTTTCAGCTAAATATAGTTCCTCCG 58.664 37.037 0.00 0.00 0.00 4.63
1839 4056 6.726490 TTCAGCTAAATATAGTTCCTCCGT 57.274 37.500 0.00 0.00 0.00 4.69
1840 4057 6.328641 TCAGCTAAATATAGTTCCTCCGTC 57.671 41.667 0.00 0.00 0.00 4.79
1841 4058 5.243283 TCAGCTAAATATAGTTCCTCCGTCC 59.757 44.000 0.00 0.00 0.00 4.79
1842 4059 4.527427 AGCTAAATATAGTTCCTCCGTCCC 59.473 45.833 0.00 0.00 0.00 4.46
1847 4064 7.569599 AAATATAGTTCCTCCGTCCCATAAT 57.430 36.000 0.00 0.00 0.00 1.28
1849 4066 2.478292 AGTTCCTCCGTCCCATAATGT 58.522 47.619 0.00 0.00 0.00 2.71
1852 4069 4.101119 AGTTCCTCCGTCCCATAATGTAAG 59.899 45.833 0.00 0.00 0.00 2.34
1853 4070 3.918566 TCCTCCGTCCCATAATGTAAGA 58.081 45.455 0.00 0.00 0.00 2.10
1854 4071 3.640029 TCCTCCGTCCCATAATGTAAGAC 59.360 47.826 0.00 0.00 0.00 3.01
1862 4079 6.199393 GTCCCATAATGTAAGACGATTTTGC 58.801 40.000 0.00 0.00 0.00 3.68
1863 4080 5.883115 TCCCATAATGTAAGACGATTTTGCA 59.117 36.000 0.00 0.00 0.00 4.08
1864 4081 6.375736 TCCCATAATGTAAGACGATTTTGCAA 59.624 34.615 0.00 0.00 0.00 4.08
1865 4082 6.692681 CCCATAATGTAAGACGATTTTGCAAG 59.307 38.462 0.00 0.00 0.00 4.01
1866 4083 6.197096 CCATAATGTAAGACGATTTTGCAAGC 59.803 38.462 0.00 0.00 0.00 4.01
1867 4084 5.376854 AATGTAAGACGATTTTGCAAGCT 57.623 34.783 0.00 0.00 0.00 3.74
1868 4085 4.145876 TGTAAGACGATTTTGCAAGCTG 57.854 40.909 0.00 0.00 0.00 4.24
1869 4086 2.712057 AAGACGATTTTGCAAGCTGG 57.288 45.000 0.00 0.00 0.00 4.85
1870 4087 1.609208 AGACGATTTTGCAAGCTGGT 58.391 45.000 0.00 0.00 0.00 4.00
1871 4088 1.956477 AGACGATTTTGCAAGCTGGTT 59.044 42.857 0.00 0.00 0.00 3.67
1872 4089 2.053627 GACGATTTTGCAAGCTGGTTG 58.946 47.619 14.86 14.86 39.41 3.77
1873 4090 1.269726 ACGATTTTGCAAGCTGGTTGG 60.270 47.619 19.87 5.19 36.56 3.77
1874 4091 1.000385 CGATTTTGCAAGCTGGTTGGA 60.000 47.619 19.87 15.21 36.56 3.53
1875 4092 2.680577 GATTTTGCAAGCTGGTTGGAG 58.319 47.619 19.87 0.00 37.84 3.86
1876 4093 0.752054 TTTTGCAAGCTGGTTGGAGG 59.248 50.000 19.87 0.00 37.84 4.30
1877 4094 0.106268 TTTGCAAGCTGGTTGGAGGA 60.106 50.000 19.87 8.15 37.84 3.71
1878 4095 0.106268 TTGCAAGCTGGTTGGAGGAA 60.106 50.000 19.87 1.04 37.84 3.36
1879 4096 0.538057 TGCAAGCTGGTTGGAGGAAG 60.538 55.000 19.87 0.00 36.56 3.46
1880 4097 0.538287 GCAAGCTGGTTGGAGGAAGT 60.538 55.000 19.87 0.00 36.56 3.01
1949 4189 1.823250 GCACAGGGGAACTTGATTGGT 60.823 52.381 0.00 0.00 40.48 3.67
1955 4195 1.644786 GGAACTTGATTGGTCGGGCG 61.645 60.000 0.00 0.00 0.00 6.13
1982 4222 3.133691 CCAGTATTGTGATGATGGACCG 58.866 50.000 0.00 0.00 0.00 4.79
2037 4281 9.499479 CAAGTGATATAATAGATGGCTTTCAGT 57.501 33.333 0.00 0.00 0.00 3.41
2079 4329 4.883585 CACCACCTATTGTATGCAACTGAT 59.116 41.667 0.00 0.00 37.44 2.90
2082 4332 5.357878 CCACCTATTGTATGCAACTGATTGT 59.642 40.000 0.00 0.00 38.17 2.71
2177 5029 5.952947 TCCCCAAAAATATTCATACACGGTT 59.047 36.000 0.00 0.00 0.00 4.44
2349 5232 1.874872 GCCGCTTTGTGGTGTAAGTTA 59.125 47.619 0.00 0.00 35.34 2.24
2352 5235 4.154556 GCCGCTTTGTGGTGTAAGTTAATA 59.845 41.667 0.00 0.00 35.34 0.98
2381 5268 5.537300 TCTGACTCCAACTAATATCCAGC 57.463 43.478 0.00 0.00 0.00 4.85
2438 5328 8.218338 ACAGACTGGCAAATTATCTAAGAATG 57.782 34.615 7.51 0.00 0.00 2.67
2564 5537 2.679996 TCGTGCTAGCCTGAGCCA 60.680 61.111 13.29 0.00 42.11 4.75
2569 5542 0.979709 TGCTAGCCTGAGCCATGAGT 60.980 55.000 13.29 0.00 42.11 3.41
2570 5543 0.532417 GCTAGCCTGAGCCATGAGTG 60.532 60.000 2.29 0.00 41.25 3.51
2582 5555 2.763933 CCATGAGTGCTTGCGAGATAT 58.236 47.619 4.70 0.00 0.00 1.63
2583 5556 3.862264 GCCATGAGTGCTTGCGAGATATA 60.862 47.826 4.70 0.00 0.00 0.86
2590 5563 4.752101 AGTGCTTGCGAGATATATTTGGAC 59.248 41.667 4.70 0.00 0.00 4.02
2592 5565 4.751600 TGCTTGCGAGATATATTTGGACAG 59.248 41.667 4.70 0.00 0.00 3.51
2604 5577 4.598036 ATTTGGACAGATCCCTGAATGT 57.402 40.909 0.00 0.00 45.59 2.71
2610 5583 5.724370 TGGACAGATCCCTGAATGTAACTAA 59.276 40.000 0.00 0.00 45.59 2.24
2613 5586 7.016153 ACAGATCCCTGAATGTAACTAACAA 57.984 36.000 0.00 0.00 41.36 2.83
2792 5769 7.661968 TGATTAAATTGGAGATCTACTCGGAG 58.338 38.462 6.49 2.83 45.76 4.63
2849 5944 3.510360 TCCCAAACTCTAGTCTGCAGTAC 59.490 47.826 14.67 10.66 0.00 2.73
2976 6071 0.109458 TTTCGTGAGGTCATCGTCCG 60.109 55.000 0.00 0.00 0.00 4.79
2995 6090 3.264706 TCCGGATAAACAGGAATTCACCA 59.735 43.478 0.00 0.00 39.72 4.17
3220 6512 4.273724 TGTTCTATTGCGTGTGTTGCTAAA 59.726 37.500 0.00 0.00 0.00 1.85
3237 6529 4.754618 TGCTAAACTCGCAATCTGAAGAAA 59.245 37.500 0.00 0.00 33.87 2.52
3246 6538 9.167311 ACTCGCAATCTGAAGAAATTTAAGTAT 57.833 29.630 0.00 0.00 0.00 2.12
3247 6539 9.430838 CTCGCAATCTGAAGAAATTTAAGTATG 57.569 33.333 0.00 0.00 0.00 2.39
3248 6540 8.946085 TCGCAATCTGAAGAAATTTAAGTATGT 58.054 29.630 0.00 0.00 0.00 2.29
3381 6703 4.708726 AAACCAGAGCAGTATTCAATGC 57.291 40.909 0.00 0.00 42.87 3.56
3444 6768 6.970640 AGGATATGGATGATTATCTGAAGGGT 59.029 38.462 0.00 0.00 33.68 4.34
3569 6896 5.468540 AGGTTGACAAAAGCCTAAAATCC 57.531 39.130 0.00 0.00 0.00 3.01
3582 6909 5.907079 AGCCTAAAATCCCATTTTGATCCAT 59.093 36.000 4.76 0.00 42.08 3.41
3587 6914 7.926674 AAAATCCCATTTTGATCCATGTTTC 57.073 32.000 0.00 0.00 40.69 2.78
3775 8146 0.676151 GAGCCTTTGAGCCAGTCCTG 60.676 60.000 0.00 0.00 0.00 3.86
3822 8199 5.348986 TCTTCATATTGGAACTAGTGACGC 58.651 41.667 0.00 0.00 0.00 5.19
3830 8207 1.131883 GAACTAGTGACGCGGCTTAGA 59.868 52.381 24.44 0.00 0.00 2.10
3833 8210 0.731417 TAGTGACGCGGCTTAGAGAC 59.269 55.000 15.80 0.31 0.00 3.36
3897 8274 3.825328 AGATTTGGTCTGCAGACAAAGT 58.175 40.909 39.71 33.46 46.47 2.66
4112 8498 1.261938 TGATGGGGAACGATGTCGGT 61.262 55.000 7.38 0.00 44.92 4.69
4137 8529 2.493675 CTCCTTCAGTCCTCGACATGAA 59.506 50.000 0.00 1.74 34.60 2.57
4140 8532 3.506810 CTTCAGTCCTCGACATGAAGAC 58.493 50.000 18.79 0.00 42.79 3.01
4155 8547 2.087646 GAAGACCCACCATCTTCTTGC 58.912 52.381 7.36 0.00 45.77 4.01
4162 8555 0.329596 ACCATCTTCTTGCCAGGGAC 59.670 55.000 0.00 0.00 0.00 4.46
4169 8562 3.266772 TCTTCTTGCCAGGGACATAATGT 59.733 43.478 0.00 0.00 0.00 2.71
4170 8563 3.737559 TCTTGCCAGGGACATAATGTT 57.262 42.857 0.00 0.00 0.00 2.71
4171 8564 3.355378 TCTTGCCAGGGACATAATGTTG 58.645 45.455 0.00 0.00 0.00 3.33
4173 8566 1.638070 TGCCAGGGACATAATGTTGGA 59.362 47.619 0.00 0.00 29.47 3.53
4178 8577 4.280819 CAGGGACATAATGTTGGATTGGT 58.719 43.478 0.00 0.00 0.00 3.67
4190 8589 6.314899 TGTTGGATTGGTGTGGTGTATATA 57.685 37.500 0.00 0.00 0.00 0.86
4216 8615 6.757947 TCATTCTTTGTTCAAGCTTTTCCTTG 59.242 34.615 0.00 0.00 42.73 3.61
4220 8619 3.096092 TGTTCAAGCTTTTCCTTGTGGT 58.904 40.909 0.00 0.00 42.16 4.16
4223 8622 5.362430 TGTTCAAGCTTTTCCTTGTGGTATT 59.638 36.000 0.00 0.00 42.16 1.89
4269 8669 6.483640 AGCAACTGTAAAAACAAAAACCACAA 59.516 30.769 0.00 0.00 0.00 3.33
4291 8691 7.822334 CACAAGTTACATGTCAGGTCCTTAATA 59.178 37.037 0.00 0.00 0.00 0.98
4292 8692 8.041323 ACAAGTTACATGTCAGGTCCTTAATAG 58.959 37.037 0.00 0.00 0.00 1.73
4307 8710 8.552034 GGTCCTTAATAGATTTTCTCATGTTCG 58.448 37.037 0.00 0.00 0.00 3.95
4323 8726 7.381408 TCTCATGTTCGTCTTACTACTTTGTTG 59.619 37.037 0.00 0.00 0.00 3.33
4327 8730 6.979817 TGTTCGTCTTACTACTTTGTTGCTTA 59.020 34.615 0.00 0.00 0.00 3.09
4328 8731 7.492020 TGTTCGTCTTACTACTTTGTTGCTTAA 59.508 33.333 0.00 0.00 0.00 1.85
4329 8732 8.493547 GTTCGTCTTACTACTTTGTTGCTTAAT 58.506 33.333 0.00 0.00 0.00 1.40
4330 8733 9.695526 TTCGTCTTACTACTTTGTTGCTTAATA 57.304 29.630 0.00 0.00 0.00 0.98
4348 8751 8.604035 TGCTTAATAGATTTTCTCATGTTCGTC 58.396 33.333 0.00 0.00 0.00 4.20
4356 8765 9.823647 AGATTTTCTCATGTTCGTCTTACATAT 57.176 29.630 0.00 0.00 34.59 1.78
4369 8778 9.642327 TTCGTCTTACATATACTTTGTTGCTTA 57.358 29.630 0.00 0.00 0.00 3.09
4370 8779 9.642327 TCGTCTTACATATACTTTGTTGCTTAA 57.358 29.630 0.00 0.00 0.00 1.85
4381 8790 7.796958 ACTTTGTTGCTTAATAGATTTTCGC 57.203 32.000 0.00 0.00 0.00 4.70
4382 8791 7.367285 ACTTTGTTGCTTAATAGATTTTCGCA 58.633 30.769 0.00 0.00 0.00 5.10
4383 8792 8.028938 ACTTTGTTGCTTAATAGATTTTCGCAT 58.971 29.630 0.00 0.00 0.00 4.73
4384 8793 7.739022 TTGTTGCTTAATAGATTTTCGCATG 57.261 32.000 0.00 0.00 0.00 4.06
4385 8794 6.851609 TGTTGCTTAATAGATTTTCGCATGT 58.148 32.000 0.00 0.00 0.00 3.21
4386 8795 7.312154 TGTTGCTTAATAGATTTTCGCATGTT 58.688 30.769 0.00 0.00 0.00 2.71
4387 8796 7.484641 TGTTGCTTAATAGATTTTCGCATGTTC 59.515 33.333 0.00 0.00 0.00 3.18
4388 8797 6.191661 TGCTTAATAGATTTTCGCATGTTCG 58.808 36.000 0.00 0.00 0.00 3.95
4389 8798 6.183360 TGCTTAATAGATTTTCGCATGTTCGT 60.183 34.615 0.00 0.00 0.00 3.85
4390 8799 6.354622 GCTTAATAGATTTTCGCATGTTCGTC 59.645 38.462 0.00 0.00 0.00 4.20
4391 8800 7.534085 TTAATAGATTTTCGCATGTTCGTCT 57.466 32.000 0.00 0.00 0.00 4.18
4392 8801 6.422776 AATAGATTTTCGCATGTTCGTCTT 57.577 33.333 0.00 0.00 0.00 3.01
4393 8802 7.534085 AATAGATTTTCGCATGTTCGTCTTA 57.466 32.000 0.00 0.00 0.00 2.10
4394 8803 5.204673 AGATTTTCGCATGTTCGTCTTAC 57.795 39.130 0.00 0.00 0.00 2.34
4395 8804 4.688879 AGATTTTCGCATGTTCGTCTTACA 59.311 37.500 0.00 0.00 0.00 2.41
4396 8805 5.351465 AGATTTTCGCATGTTCGTCTTACAT 59.649 36.000 0.00 0.00 36.70 2.29
4397 8806 4.577687 TTTCGCATGTTCGTCTTACATC 57.422 40.909 0.00 0.00 34.11 3.06
4398 8807 2.536365 TCGCATGTTCGTCTTACATCC 58.464 47.619 0.00 0.00 34.11 3.51
4411 8820 5.585390 GTCTTACATCCCATGATTTGCAAG 58.415 41.667 0.00 0.00 0.00 4.01
4429 8842 3.804873 GCAAGCTTCTACATGCCTAGTAC 59.195 47.826 0.00 0.00 32.73 2.73
4432 8845 3.892588 AGCTTCTACATGCCTAGTACTCC 59.107 47.826 0.00 0.00 0.00 3.85
4433 8846 3.006003 GCTTCTACATGCCTAGTACTCCC 59.994 52.174 0.00 0.00 0.00 4.30
4434 8847 4.475345 CTTCTACATGCCTAGTACTCCCT 58.525 47.826 0.00 0.00 0.00 4.20
4435 8848 4.101645 TCTACATGCCTAGTACTCCCTC 57.898 50.000 0.00 0.00 0.00 4.30
4436 8849 2.089600 ACATGCCTAGTACTCCCTCC 57.910 55.000 0.00 0.00 0.00 4.30
4437 8850 0.962489 CATGCCTAGTACTCCCTCCG 59.038 60.000 0.00 0.00 0.00 4.63
4438 8851 0.556747 ATGCCTAGTACTCCCTCCGT 59.443 55.000 0.00 0.00 0.00 4.69
4439 8852 0.106819 TGCCTAGTACTCCCTCCGTC 60.107 60.000 0.00 0.00 0.00 4.79
4440 8853 0.183252 GCCTAGTACTCCCTCCGTCT 59.817 60.000 0.00 0.00 0.00 4.18
4441 8854 1.970092 CCTAGTACTCCCTCCGTCTG 58.030 60.000 0.00 0.00 0.00 3.51
4442 8855 1.477195 CCTAGTACTCCCTCCGTCTGG 60.477 61.905 0.00 0.00 0.00 3.86
4443 8856 1.489649 CTAGTACTCCCTCCGTCTGGA 59.510 57.143 0.00 0.00 43.88 3.86
4444 8857 0.702902 AGTACTCCCTCCGTCTGGAA 59.297 55.000 0.00 0.00 45.87 3.53
4445 8858 1.288335 AGTACTCCCTCCGTCTGGAAT 59.712 52.381 0.00 0.00 45.87 3.01
4446 8859 2.108970 GTACTCCCTCCGTCTGGAATT 58.891 52.381 0.00 0.00 45.87 2.17
4447 8860 2.544844 ACTCCCTCCGTCTGGAATTA 57.455 50.000 0.00 0.00 45.87 1.40
4448 8861 2.108970 ACTCCCTCCGTCTGGAATTAC 58.891 52.381 0.00 0.00 45.87 1.89
4449 8862 2.292323 ACTCCCTCCGTCTGGAATTACT 60.292 50.000 0.00 0.00 45.87 2.24
4450 8863 2.766828 CTCCCTCCGTCTGGAATTACTT 59.233 50.000 0.00 0.00 45.87 2.24
4451 8864 2.500098 TCCCTCCGTCTGGAATTACTTG 59.500 50.000 0.00 0.00 45.87 3.16
4452 8865 2.236395 CCCTCCGTCTGGAATTACTTGT 59.764 50.000 0.00 0.00 45.87 3.16
4453 8866 3.522553 CCTCCGTCTGGAATTACTTGTC 58.477 50.000 0.00 0.00 45.87 3.18
4454 8867 3.179830 CTCCGTCTGGAATTACTTGTCG 58.820 50.000 0.00 0.00 45.87 4.35
4455 8868 2.094390 TCCGTCTGGAATTACTTGTCGG 60.094 50.000 11.35 11.35 42.85 4.79
4456 8869 2.094390 CCGTCTGGAATTACTTGTCGGA 60.094 50.000 11.90 0.00 38.03 4.55
4457 8870 3.179830 CGTCTGGAATTACTTGTCGGAG 58.820 50.000 0.00 0.00 0.00 4.63
4458 8871 3.119602 CGTCTGGAATTACTTGTCGGAGA 60.120 47.826 0.00 0.00 0.00 3.71
4459 8872 4.425520 GTCTGGAATTACTTGTCGGAGAG 58.574 47.826 0.00 0.00 36.95 3.20
4460 8873 4.158025 GTCTGGAATTACTTGTCGGAGAGA 59.842 45.833 0.00 0.00 36.95 3.10
4461 8874 4.956700 TCTGGAATTACTTGTCGGAGAGAT 59.043 41.667 0.00 0.00 36.95 2.75
4462 8875 6.039493 GTCTGGAATTACTTGTCGGAGAGATA 59.961 42.308 0.00 0.00 36.95 1.98
4463 8876 6.263392 TCTGGAATTACTTGTCGGAGAGATAG 59.737 42.308 0.00 0.00 36.95 2.08
4464 8877 6.127101 TGGAATTACTTGTCGGAGAGATAGA 58.873 40.000 0.00 0.00 36.95 1.98
4465 8878 6.778069 TGGAATTACTTGTCGGAGAGATAGAT 59.222 38.462 0.00 0.00 36.95 1.98
4466 8879 7.087639 GGAATTACTTGTCGGAGAGATAGATG 58.912 42.308 0.00 0.00 36.95 2.90
4467 8880 7.255660 GGAATTACTTGTCGGAGAGATAGATGT 60.256 40.741 0.00 0.00 36.95 3.06
4468 8881 4.909696 ACTTGTCGGAGAGATAGATGTG 57.090 45.455 0.00 0.00 36.95 3.21
4469 8882 4.274147 ACTTGTCGGAGAGATAGATGTGT 58.726 43.478 0.00 0.00 36.95 3.72
4470 8883 4.336993 ACTTGTCGGAGAGATAGATGTGTC 59.663 45.833 0.00 0.00 36.95 3.67
4471 8884 4.157849 TGTCGGAGAGATAGATGTGTCT 57.842 45.455 0.00 0.00 36.95 3.41
4472 8885 5.291905 TGTCGGAGAGATAGATGTGTCTA 57.708 43.478 0.00 0.00 38.22 2.59
4473 8886 5.681639 TGTCGGAGAGATAGATGTGTCTAA 58.318 41.667 0.00 0.00 37.63 2.10
4474 8887 6.120220 TGTCGGAGAGATAGATGTGTCTAAA 58.880 40.000 0.00 0.00 37.63 1.85
4475 8888 6.038382 TGTCGGAGAGATAGATGTGTCTAAAC 59.962 42.308 0.00 0.00 37.63 2.01
4476 8889 5.236695 TCGGAGAGATAGATGTGTCTAAACG 59.763 44.000 0.00 0.00 40.21 3.60
4477 8890 5.007823 CGGAGAGATAGATGTGTCTAAACGT 59.992 44.000 0.00 0.00 40.21 3.99
4478 8891 6.202379 CGGAGAGATAGATGTGTCTAAACGTA 59.798 42.308 0.00 0.00 40.21 3.57
4479 8892 7.095144 CGGAGAGATAGATGTGTCTAAACGTAT 60.095 40.741 0.00 0.00 40.21 3.06
4480 8893 8.569641 GGAGAGATAGATGTGTCTAAACGTATT 58.430 37.037 0.00 0.00 40.21 1.89
4534 8947 9.277565 CATTTCTATCACAAGTAATTCCAAACG 57.722 33.333 0.00 0.00 0.00 3.60
4535 8948 6.978343 TCTATCACAAGTAATTCCAAACGG 57.022 37.500 0.00 0.00 0.00 4.44
4536 8949 6.703319 TCTATCACAAGTAATTCCAAACGGA 58.297 36.000 0.00 0.00 0.00 4.69
4537 8950 5.880054 ATCACAAGTAATTCCAAACGGAG 57.120 39.130 0.00 0.00 32.88 4.63
4538 8951 4.069304 TCACAAGTAATTCCAAACGGAGG 58.931 43.478 0.00 0.00 32.88 4.30
4539 8952 3.190535 CACAAGTAATTCCAAACGGAGGG 59.809 47.826 0.00 0.00 32.88 4.30
4540 8953 3.073356 ACAAGTAATTCCAAACGGAGGGA 59.927 43.478 0.00 0.00 32.88 4.20
4541 8954 4.076394 CAAGTAATTCCAAACGGAGGGAA 58.924 43.478 6.43 6.43 46.48 3.97
4548 8961 5.703730 TTCCAAACGGAGGGAATATTACT 57.296 39.130 0.00 0.00 38.23 2.24
4549 8962 5.286267 TCCAAACGGAGGGAATATTACTC 57.714 43.478 9.93 9.93 0.00 2.59
4554 8967 4.287552 ACGGAGGGAATATTACTCACAGT 58.712 43.478 16.92 12.07 32.98 3.55
4560 8973 5.661312 AGGGAATATTACTCACAGTGCAGTA 59.339 40.000 0.00 2.52 0.00 2.74
4561 8974 6.156256 AGGGAATATTACTCACAGTGCAGTAA 59.844 38.462 19.40 19.40 39.00 2.24
4579 8992 9.532697 GTGCAGTAATTTTATGATTTGCAAAAG 57.467 29.630 17.19 0.00 35.63 2.27
4580 8993 9.270640 TGCAGTAATTTTATGATTTGCAAAAGT 57.729 25.926 17.19 7.69 32.67 2.66
4581 8994 9.532697 GCAGTAATTTTATGATTTGCAAAAGTG 57.467 29.630 17.19 9.46 0.00 3.16
4598 9011 3.206957 GCTGCATGCATCTGCCGA 61.207 61.111 22.97 0.00 41.58 5.54
4599 9012 2.552819 GCTGCATGCATCTGCCGAT 61.553 57.895 22.97 0.00 41.58 4.18
4600 9013 2.030551 CTGCATGCATCTGCCGATT 58.969 52.632 22.97 0.00 41.58 3.34
4601 9014 0.384309 CTGCATGCATCTGCCGATTT 59.616 50.000 22.97 0.00 41.58 2.17
4602 9015 0.818938 TGCATGCATCTGCCGATTTT 59.181 45.000 18.46 0.00 41.58 1.82
4603 9016 1.205179 TGCATGCATCTGCCGATTTTT 59.795 42.857 18.46 0.00 41.58 1.94
4605 9018 3.047796 GCATGCATCTGCCGATTTTTAG 58.952 45.455 14.21 0.00 41.18 1.85
4606 9019 3.489738 GCATGCATCTGCCGATTTTTAGT 60.490 43.478 14.21 0.00 41.18 2.24
4607 9020 4.261155 GCATGCATCTGCCGATTTTTAGTA 60.261 41.667 14.21 0.00 41.18 1.82
4608 9021 4.875544 TGCATCTGCCGATTTTTAGTAC 57.124 40.909 0.00 0.00 41.18 2.73
4609 9022 4.513442 TGCATCTGCCGATTTTTAGTACT 58.487 39.130 0.00 0.00 41.18 2.73
4611 9024 4.024809 GCATCTGCCGATTTTTAGTACTCC 60.025 45.833 0.00 0.00 34.31 3.85
4612 9025 4.133013 TCTGCCGATTTTTAGTACTCCC 57.867 45.455 0.00 0.00 0.00 4.30
4613 9026 3.773119 TCTGCCGATTTTTAGTACTCCCT 59.227 43.478 0.00 0.00 0.00 4.20
4614 9027 4.120589 CTGCCGATTTTTAGTACTCCCTC 58.879 47.826 0.00 0.00 0.00 4.30
4615 9028 3.118519 TGCCGATTTTTAGTACTCCCTCC 60.119 47.826 0.00 0.00 0.00 4.30
4616 9029 3.118519 GCCGATTTTTAGTACTCCCTCCA 60.119 47.826 0.00 0.00 0.00 3.86
4617 9030 4.444449 GCCGATTTTTAGTACTCCCTCCAT 60.444 45.833 0.00 0.00 0.00 3.41
4618 9031 5.681639 CCGATTTTTAGTACTCCCTCCATT 58.318 41.667 0.00 0.00 0.00 3.16
4619 9032 5.758784 CCGATTTTTAGTACTCCCTCCATTC 59.241 44.000 0.00 0.00 0.00 2.67
4620 9033 6.408206 CCGATTTTTAGTACTCCCTCCATTCT 60.408 42.308 0.00 0.00 0.00 2.40
4621 9034 7.201974 CCGATTTTTAGTACTCCCTCCATTCTA 60.202 40.741 0.00 0.00 0.00 2.10
4623 9036 9.327628 GATTTTTAGTACTCCCTCCATTCTAAC 57.672 37.037 0.00 0.00 0.00 2.34
4624 9037 8.445361 TTTTTAGTACTCCCTCCATTCTAACT 57.555 34.615 0.00 0.00 0.00 2.24
4627 9040 6.301169 AGTACTCCCTCCATTCTAACTTTG 57.699 41.667 0.00 0.00 0.00 2.77
4629 9042 3.282885 CTCCCTCCATTCTAACTTTGCC 58.717 50.000 0.00 0.00 0.00 4.52
4630 9043 2.025321 TCCCTCCATTCTAACTTTGCCC 60.025 50.000 0.00 0.00 0.00 5.36
4631 9044 2.024941 CCCTCCATTCTAACTTTGCCCT 60.025 50.000 0.00 0.00 0.00 5.19
4634 9047 4.884164 CCTCCATTCTAACTTTGCCCTAAG 59.116 45.833 0.00 0.00 0.00 2.18
4635 9048 5.501156 CTCCATTCTAACTTTGCCCTAAGT 58.499 41.667 0.00 0.00 39.97 2.24
4636 9049 5.253330 TCCATTCTAACTTTGCCCTAAGTG 58.747 41.667 0.00 0.00 38.33 3.16
4640 9265 6.628919 TTCTAACTTTGCCCTAAGTGAAAC 57.371 37.500 0.00 0.00 38.33 2.78
4673 9354 7.441458 AGGTTTGATTAATTCTATCTACGCCAC 59.559 37.037 0.00 0.00 0.00 5.01
4680 9361 9.787435 ATTAATTCTATCTACGCCACCAAATTA 57.213 29.630 0.00 0.00 0.00 1.40
4689 9370 5.208463 ACGCCACCAAATTAGTTTCATTT 57.792 34.783 0.00 0.00 0.00 2.32
4690 9371 5.227152 ACGCCACCAAATTAGTTTCATTTC 58.773 37.500 0.00 0.00 0.00 2.17
4691 9372 4.625311 CGCCACCAAATTAGTTTCATTTCC 59.375 41.667 0.00 0.00 0.00 3.13
4692 9373 4.625311 GCCACCAAATTAGTTTCATTTCCG 59.375 41.667 0.00 0.00 0.00 4.30
4695 9376 6.804783 CCACCAAATTAGTTTCATTTCCGTAC 59.195 38.462 0.00 0.00 0.00 3.67
4697 9378 8.723311 CACCAAATTAGTTTCATTTCCGTACTA 58.277 33.333 0.00 0.00 0.00 1.82
4743 9470 6.747659 CAAACATAAAGAAGTTTGGAACGG 57.252 37.500 9.49 0.00 46.57 4.44
4744 9471 6.500041 CAAACATAAAGAAGTTTGGAACGGA 58.500 36.000 9.49 0.00 46.57 4.69
4746 9473 4.760204 ACATAAAGAAGTTTGGAACGGAGG 59.240 41.667 0.00 0.00 36.23 4.30
4747 9474 2.271944 AAGAAGTTTGGAACGGAGGG 57.728 50.000 0.00 0.00 36.23 4.30
4752 9494 1.900486 AGTTTGGAACGGAGGGAGTAG 59.100 52.381 0.00 0.00 36.23 2.57
4762 9504 5.184892 ACGGAGGGAGTAGTTTAGAGTTA 57.815 43.478 0.00 0.00 0.00 2.24
4765 9507 4.341806 GGAGGGAGTAGTTTAGAGTTAGCC 59.658 50.000 0.00 0.00 0.00 3.93
4769 9511 4.381292 GGAGTAGTTTAGAGTTAGCCGCAA 60.381 45.833 0.00 0.00 0.00 4.85
4770 9512 5.340439 AGTAGTTTAGAGTTAGCCGCAAT 57.660 39.130 0.00 0.00 0.00 3.56
4771 9513 5.109903 AGTAGTTTAGAGTTAGCCGCAATG 58.890 41.667 0.00 0.00 0.00 2.82
4773 9515 3.007635 GTTTAGAGTTAGCCGCAATGGT 58.992 45.455 0.00 0.00 41.21 3.55
4774 9516 2.596904 TAGAGTTAGCCGCAATGGTC 57.403 50.000 0.00 0.00 41.21 4.02
4791 9533 4.682778 TGGTCGGAGTCCAAATATAAGG 57.317 45.455 10.49 0.00 43.85 2.69
4798 9540 7.011994 TCGGAGTCCAAATATAAGGTATACCA 58.988 38.462 23.87 4.43 38.89 3.25
4826 9568 4.511454 CGCCTCATAAATTAGCTAGTGCAA 59.489 41.667 0.00 0.00 42.74 4.08
4827 9569 5.007626 CGCCTCATAAATTAGCTAGTGCAAA 59.992 40.000 0.00 0.00 42.74 3.68
4830 9572 7.365741 CCTCATAAATTAGCTAGTGCAAATGG 58.634 38.462 0.00 0.00 42.74 3.16
4843 9585 6.949352 AGTGCAAATGGTCCATAAGATTAG 57.051 37.500 4.33 0.00 0.00 1.73
4906 9649 1.580845 AATCGCAAGCACACTCAGCC 61.581 55.000 0.00 0.00 37.18 4.85
4959 9708 1.548269 GGGGAATGCCAAAATTCGACA 59.452 47.619 0.00 0.00 37.42 4.35
4985 9734 1.153823 CCCGTCATGTCGTCTGGTC 60.154 63.158 11.29 0.00 0.00 4.02
4988 9737 0.732880 CGTCATGTCGTCTGGTCCAC 60.733 60.000 4.09 0.00 0.00 4.02
5005 9754 1.670087 CCACGCCGAAGCCATAGATAG 60.670 57.143 0.00 0.00 34.57 2.08
5037 9786 2.777832 ATGTCAACTGCTCTTCTCCC 57.222 50.000 0.00 0.00 0.00 4.30
5038 9787 0.318441 TGTCAACTGCTCTTCTCCCG 59.682 55.000 0.00 0.00 0.00 5.14
5039 9788 0.318762 GTCAACTGCTCTTCTCCCGT 59.681 55.000 0.00 0.00 0.00 5.28
5040 9789 0.603569 TCAACTGCTCTTCTCCCGTC 59.396 55.000 0.00 0.00 0.00 4.79
5041 9790 0.318441 CAACTGCTCTTCTCCCGTCA 59.682 55.000 0.00 0.00 0.00 4.35
5042 9791 1.066573 CAACTGCTCTTCTCCCGTCAT 60.067 52.381 0.00 0.00 0.00 3.06
5043 9792 0.534412 ACTGCTCTTCTCCCGTCATG 59.466 55.000 0.00 0.00 0.00 3.07
5044 9793 0.534412 CTGCTCTTCTCCCGTCATGT 59.466 55.000 0.00 0.00 0.00 3.21
5045 9794 0.532573 TGCTCTTCTCCCGTCATGTC 59.467 55.000 0.00 0.00 0.00 3.06
5046 9795 0.526524 GCTCTTCTCCCGTCATGTCG 60.527 60.000 5.32 5.32 0.00 4.35
5047 9796 0.811915 CTCTTCTCCCGTCATGTCGT 59.188 55.000 11.29 0.00 0.00 4.34
5048 9797 0.809385 TCTTCTCCCGTCATGTCGTC 59.191 55.000 11.29 0.00 0.00 4.20
5049 9798 0.811915 CTTCTCCCGTCATGTCGTCT 59.188 55.000 11.29 0.00 0.00 4.18
5050 9799 0.526211 TTCTCCCGTCATGTCGTCTG 59.474 55.000 11.29 0.34 0.00 3.51
5051 9800 1.139734 CTCCCGTCATGTCGTCTGG 59.860 63.158 11.29 5.81 0.00 3.86
5052 9801 1.595993 CTCCCGTCATGTCGTCTGGT 61.596 60.000 11.29 0.00 0.00 4.00
5053 9802 1.153823 CCCGTCATGTCGTCTGGTC 60.154 63.158 11.29 0.00 0.00 4.02
5054 9803 1.153823 CCGTCATGTCGTCTGGTCC 60.154 63.158 11.29 0.00 0.00 4.46
5055 9804 1.584495 CGTCATGTCGTCTGGTCCA 59.416 57.895 4.09 0.00 0.00 4.02
5056 9805 0.173481 CGTCATGTCGTCTGGTCCAT 59.827 55.000 4.09 0.00 0.00 3.41
5057 9806 1.645034 GTCATGTCGTCTGGTCCATG 58.355 55.000 0.00 0.00 36.80 3.66
5058 9807 0.108186 TCATGTCGTCTGGTCCATGC 60.108 55.000 0.00 0.00 35.72 4.06
5059 9808 1.091771 CATGTCGTCTGGTCCATGCC 61.092 60.000 0.00 0.00 0.00 4.40
5060 9809 2.509336 GTCGTCTGGTCCATGCCG 60.509 66.667 0.00 0.00 0.00 5.69
5061 9810 2.678580 TCGTCTGGTCCATGCCGA 60.679 61.111 0.00 0.00 0.00 5.54
5062 9811 2.264480 CGTCTGGTCCATGCCGAA 59.736 61.111 0.00 0.00 0.00 4.30
5063 9812 1.811266 CGTCTGGTCCATGCCGAAG 60.811 63.158 0.00 0.00 0.00 3.79
5064 9813 2.109126 GTCTGGTCCATGCCGAAGC 61.109 63.158 0.00 0.00 40.48 3.86
5065 9814 2.825836 CTGGTCCATGCCGAAGCC 60.826 66.667 0.00 0.00 38.69 4.35
5066 9815 3.626996 CTGGTCCATGCCGAAGCCA 62.627 63.158 0.00 0.00 38.69 4.75
5067 9816 2.124151 GGTCCATGCCGAAGCCAT 60.124 61.111 0.00 0.00 38.69 4.40
5068 9817 1.148273 GGTCCATGCCGAAGCCATA 59.852 57.895 0.00 0.00 38.69 2.74
5069 9818 0.886490 GGTCCATGCCGAAGCCATAG 60.886 60.000 0.00 0.00 38.69 2.23
5070 9819 0.106708 GTCCATGCCGAAGCCATAGA 59.893 55.000 0.00 0.00 38.69 1.98
5071 9820 1.059098 TCCATGCCGAAGCCATAGAT 58.941 50.000 0.00 0.00 38.69 1.98
5072 9821 1.002430 TCCATGCCGAAGCCATAGATC 59.998 52.381 0.00 0.00 38.69 2.75
5073 9822 1.073964 CATGCCGAAGCCATAGATCG 58.926 55.000 0.00 0.00 38.69 3.69
5076 9825 4.996976 CGAAGCCATAGATCGGGG 57.003 61.111 3.76 0.45 33.15 5.73
5080 9829 3.311110 GCCATAGATCGGGGCGGA 61.311 66.667 9.12 0.00 38.04 5.54
5081 9830 2.879233 GCCATAGATCGGGGCGGAA 61.879 63.158 9.12 0.00 38.04 4.30
5082 9831 1.983224 CCATAGATCGGGGCGGAAT 59.017 57.895 0.00 0.00 0.00 3.01
5083 9832 0.391661 CCATAGATCGGGGCGGAATG 60.392 60.000 0.00 0.00 0.00 2.67
5084 9833 0.608130 CATAGATCGGGGCGGAATGA 59.392 55.000 0.00 0.00 0.00 2.57
5085 9834 1.001974 CATAGATCGGGGCGGAATGAA 59.998 52.381 0.00 0.00 0.00 2.57
5086 9835 1.348064 TAGATCGGGGCGGAATGAAT 58.652 50.000 0.00 0.00 0.00 2.57
5087 9836 1.348064 AGATCGGGGCGGAATGAATA 58.652 50.000 0.00 0.00 0.00 1.75
5088 9837 1.909302 AGATCGGGGCGGAATGAATAT 59.091 47.619 0.00 0.00 0.00 1.28
5089 9838 2.009774 GATCGGGGCGGAATGAATATG 58.990 52.381 0.00 0.00 0.00 1.78
5090 9839 0.762418 TCGGGGCGGAATGAATATGT 59.238 50.000 0.00 0.00 0.00 2.29
5091 9840 1.156736 CGGGGCGGAATGAATATGTC 58.843 55.000 0.00 0.00 0.00 3.06
5092 9841 1.542328 CGGGGCGGAATGAATATGTCA 60.542 52.381 0.00 0.00 41.67 3.58
5093 9842 2.582052 GGGGCGGAATGAATATGTCAA 58.418 47.619 0.00 0.00 40.50 3.18
5094 9843 2.293399 GGGGCGGAATGAATATGTCAAC 59.707 50.000 0.00 0.00 40.50 3.18
5095 9844 3.214328 GGGCGGAATGAATATGTCAACT 58.786 45.455 0.00 0.00 40.50 3.16
5096 9845 3.003689 GGGCGGAATGAATATGTCAACTG 59.996 47.826 0.00 0.00 40.50 3.16
5097 9846 3.548818 GGCGGAATGAATATGTCAACTGC 60.549 47.826 0.00 0.00 42.84 4.40
5098 9847 3.313526 GCGGAATGAATATGTCAACTGCT 59.686 43.478 14.26 0.00 41.59 4.24
5099 9848 4.553547 GCGGAATGAATATGTCAACTGCTC 60.554 45.833 14.26 0.00 41.59 4.26
5100 9849 4.813161 CGGAATGAATATGTCAACTGCTCT 59.187 41.667 0.00 0.00 40.50 4.09
5101 9850 5.295292 CGGAATGAATATGTCAACTGCTCTT 59.705 40.000 0.00 0.00 40.50 2.85
5102 9851 6.510799 CGGAATGAATATGTCAACTGCTCTTC 60.511 42.308 0.00 0.00 40.50 2.87
5103 9852 6.541641 GGAATGAATATGTCAACTGCTCTTCT 59.458 38.462 0.00 0.00 40.50 2.85
5104 9853 7.254727 GGAATGAATATGTCAACTGCTCTTCTC 60.255 40.741 0.00 0.00 40.50 2.87
5105 9854 5.423015 TGAATATGTCAACTGCTCTTCTCC 58.577 41.667 0.00 0.00 31.51 3.71
5106 9855 5.046376 TGAATATGTCAACTGCTCTTCTCCA 60.046 40.000 0.00 0.00 31.51 3.86
5107 9856 2.533266 TGTCAACTGCTCTTCTCCAC 57.467 50.000 0.00 0.00 0.00 4.02
5108 9857 1.070758 TGTCAACTGCTCTTCTCCACC 59.929 52.381 0.00 0.00 0.00 4.61
5109 9858 1.070758 GTCAACTGCTCTTCTCCACCA 59.929 52.381 0.00 0.00 0.00 4.17
5110 9859 1.345741 TCAACTGCTCTTCTCCACCAG 59.654 52.381 0.00 0.00 0.00 4.00
5111 9860 1.071385 CAACTGCTCTTCTCCACCAGT 59.929 52.381 0.00 0.00 38.30 4.00
5112 9861 2.300152 CAACTGCTCTTCTCCACCAGTA 59.700 50.000 0.00 0.00 35.86 2.74
5113 9862 2.609747 ACTGCTCTTCTCCACCAGTAA 58.390 47.619 0.00 0.00 35.20 2.24
5114 9863 2.972713 ACTGCTCTTCTCCACCAGTAAA 59.027 45.455 0.00 0.00 35.20 2.01
5115 9864 3.007398 ACTGCTCTTCTCCACCAGTAAAG 59.993 47.826 0.00 0.00 35.20 1.85
5116 9865 2.289694 TGCTCTTCTCCACCAGTAAAGC 60.290 50.000 0.00 0.00 0.00 3.51
5117 9866 2.289694 GCTCTTCTCCACCAGTAAAGCA 60.290 50.000 0.00 0.00 0.00 3.91
5118 9867 3.330267 CTCTTCTCCACCAGTAAAGCAC 58.670 50.000 0.00 0.00 0.00 4.40
5119 9868 2.972713 TCTTCTCCACCAGTAAAGCACT 59.027 45.455 0.00 0.00 38.32 4.40
5120 9869 4.157246 TCTTCTCCACCAGTAAAGCACTA 58.843 43.478 0.00 0.00 34.98 2.74
5121 9870 4.220821 TCTTCTCCACCAGTAAAGCACTAG 59.779 45.833 0.00 0.00 34.98 2.57
5122 9871 3.507411 TCTCCACCAGTAAAGCACTAGT 58.493 45.455 0.00 0.00 34.98 2.57
5123 9872 4.669700 TCTCCACCAGTAAAGCACTAGTA 58.330 43.478 0.00 0.00 34.98 1.82
5124 9873 4.461781 TCTCCACCAGTAAAGCACTAGTAC 59.538 45.833 0.00 0.00 34.98 2.73
5125 9874 4.413760 TCCACCAGTAAAGCACTAGTACT 58.586 43.478 0.00 0.00 34.98 2.73
5126 9875 4.219944 TCCACCAGTAAAGCACTAGTACTG 59.780 45.833 13.58 13.58 42.82 2.74
5127 9876 4.021368 CCACCAGTAAAGCACTAGTACTGT 60.021 45.833 17.42 6.52 42.02 3.55
5128 9877 5.510861 CCACCAGTAAAGCACTAGTACTGTT 60.511 44.000 17.42 4.88 42.02 3.16
5129 9878 5.989777 CACCAGTAAAGCACTAGTACTGTTT 59.010 40.000 17.42 8.38 42.02 2.83
5130 9879 5.989777 ACCAGTAAAGCACTAGTACTGTTTG 59.010 40.000 17.42 8.25 42.02 2.93
5131 9880 5.107065 CCAGTAAAGCACTAGTACTGTTTGC 60.107 44.000 17.42 11.00 42.02 3.68
5132 9881 5.696724 CAGTAAAGCACTAGTACTGTTTGCT 59.303 40.000 17.43 17.43 45.41 3.91
5133 9882 5.927115 AGTAAAGCACTAGTACTGTTTGCTC 59.073 40.000 21.26 12.89 42.69 4.26
5134 9883 4.336889 AAGCACTAGTACTGTTTGCTCA 57.663 40.909 21.26 0.00 42.69 4.26
5135 9884 4.543590 AGCACTAGTACTGTTTGCTCAT 57.456 40.909 17.43 2.21 39.32 2.90
5136 9885 4.499183 AGCACTAGTACTGTTTGCTCATC 58.501 43.478 17.43 0.00 39.32 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 37 1.809567 CTCCACCAACAAGCCTTGCC 61.810 60.000 3.88 0.00 0.00 4.52
65 70 6.606796 ACTGATGGCCATTGACAACATAATTA 59.393 34.615 21.84 0.00 0.00 1.40
302 307 9.817365 GTGCAAGATGATGTAATATGTCATTAC 57.183 33.333 0.00 1.12 33.03 1.89
315 320 5.654603 ATTCATGTTGTGCAAGATGATGT 57.345 34.783 20.36 12.39 46.15 3.06
337 393 9.525826 TCTAGCATGTCTATCTCATTCTCAATA 57.474 33.333 0.00 0.00 0.00 1.90
351 407 8.749354 TGTATCAAAAGTTCTCTAGCATGTCTA 58.251 33.333 0.00 0.00 0.00 2.59
411 467 7.877097 ACAAGAGATCTATGCATCCTATTTGAC 59.123 37.037 0.19 0.00 0.00 3.18
435 492 6.587206 TTTTGATGAGTTGGATGCATTACA 57.413 33.333 0.00 0.01 0.00 2.41
446 503 7.535258 CCTTAACGTCTCAATTTTGATGAGTTG 59.465 37.037 13.08 1.18 43.77 3.16
452 845 7.936584 TCAAACCTTAACGTCTCAATTTTGAT 58.063 30.769 0.00 0.00 36.46 2.57
464 857 2.279935 TGCCCATCAAACCTTAACGT 57.720 45.000 0.00 0.00 0.00 3.99
584 977 8.969260 AAATAGTAATCTGCATTGATGAGACA 57.031 30.769 0.00 0.00 0.00 3.41
645 1038 2.446282 CCCTCAACGTTTGTTTGTTCG 58.554 47.619 0.00 0.00 35.72 3.95
646 1039 2.164827 ACCCCTCAACGTTTGTTTGTTC 59.835 45.455 0.00 0.00 35.72 3.18
649 1042 2.021457 AGACCCCTCAACGTTTGTTTG 58.979 47.619 0.00 0.00 35.72 2.93
654 1047 4.360951 TCAAATAGACCCCTCAACGTTT 57.639 40.909 0.00 0.00 0.00 3.60
655 1048 4.569719 ATCAAATAGACCCCTCAACGTT 57.430 40.909 0.00 0.00 0.00 3.99
656 1049 4.101119 CCTATCAAATAGACCCCTCAACGT 59.899 45.833 0.00 0.00 34.77 3.99
657 1050 4.632153 CCTATCAAATAGACCCCTCAACG 58.368 47.826 0.00 0.00 34.77 4.10
658 1051 4.390264 GCCTATCAAATAGACCCCTCAAC 58.610 47.826 0.00 0.00 34.77 3.18
659 1052 3.071023 CGCCTATCAAATAGACCCCTCAA 59.929 47.826 0.00 0.00 34.77 3.02
660 1053 2.632996 CGCCTATCAAATAGACCCCTCA 59.367 50.000 0.00 0.00 34.77 3.86
661 1054 2.613223 GCGCCTATCAAATAGACCCCTC 60.613 54.545 0.00 0.00 34.77 4.30
662 1055 1.348036 GCGCCTATCAAATAGACCCCT 59.652 52.381 0.00 0.00 34.77 4.79
663 1056 1.610886 GGCGCCTATCAAATAGACCCC 60.611 57.143 22.15 0.00 34.77 4.95
666 1059 3.669251 AGAGGCGCCTATCAAATAGAC 57.331 47.619 32.97 13.09 34.77 2.59
668 1061 5.590530 AGATAGAGGCGCCTATCAAATAG 57.409 43.478 31.34 0.00 44.57 1.73
670 1063 6.041069 GGTATAGATAGAGGCGCCTATCAAAT 59.959 42.308 31.34 25.87 44.57 2.32
672 1065 4.888239 GGTATAGATAGAGGCGCCTATCAA 59.112 45.833 31.34 17.43 44.57 2.57
708 2364 1.772063 GACGAGCCACCACACACAAC 61.772 60.000 0.00 0.00 0.00 3.32
713 2369 0.814010 AGTTTGACGAGCCACCACAC 60.814 55.000 0.00 0.00 0.00 3.82
734 2390 1.803289 GCCGGAGCCATTGAGTTTC 59.197 57.895 5.05 0.00 0.00 2.78
879 2583 7.699566 ACGAACAAGTTTTGCTACTATGAAAA 58.300 30.769 0.00 0.00 0.00 2.29
1178 3352 1.462616 TCAATCAATCCCACGCAAGG 58.537 50.000 0.00 0.00 46.39 3.61
1182 3356 1.002468 CGGAATCAATCAATCCCACGC 60.002 52.381 0.00 0.00 0.00 5.34
1183 3357 1.603802 CCGGAATCAATCAATCCCACG 59.396 52.381 0.00 0.00 0.00 4.94
1189 3363 1.215173 TCCCTGCCGGAATCAATCAAT 59.785 47.619 5.05 0.00 37.88 2.57
1201 3375 4.506255 GGTCCCCAATCCCTGCCG 62.506 72.222 0.00 0.00 0.00 5.69
1202 3376 3.346734 TGGTCCCCAATCCCTGCC 61.347 66.667 0.00 0.00 0.00 4.85
1295 3472 1.902508 GAAGATGGGGTCAGTCAGTCA 59.097 52.381 0.00 0.00 0.00 3.41
1296 3473 2.183679 AGAAGATGGGGTCAGTCAGTC 58.816 52.381 0.00 0.00 0.00 3.51
1297 3474 2.334006 AGAAGATGGGGTCAGTCAGT 57.666 50.000 0.00 0.00 0.00 3.41
1298 3475 2.093235 GGAAGAAGATGGGGTCAGTCAG 60.093 54.545 0.00 0.00 0.00 3.51
1299 3476 1.909302 GGAAGAAGATGGGGTCAGTCA 59.091 52.381 0.00 0.00 0.00 3.41
1374 3555 0.819259 GAACACAAGGGAGCACAGCA 60.819 55.000 0.00 0.00 0.00 4.41
1375 3556 0.819259 TGAACACAAGGGAGCACAGC 60.819 55.000 0.00 0.00 0.00 4.40
1384 3575 2.493675 TCCGATCTCTCTGAACACAAGG 59.506 50.000 0.00 0.00 0.00 3.61
1399 3590 1.595382 CCATGTCCCGCTTCCGATC 60.595 63.158 0.00 0.00 36.29 3.69
1459 3650 3.179048 GACAAAACTGTGCTGGTTGAAC 58.821 45.455 0.00 0.00 0.00 3.18
1491 3685 9.899226 AAAGCTTCTGATTATTTTTGTACAGAC 57.101 29.630 0.00 0.00 34.79 3.51
1513 3707 4.173256 ACAACAGTTACAGCAAACAAAGC 58.827 39.130 0.00 0.00 0.00 3.51
1549 3744 4.586421 TGACATGCAAGGGAAAACAACATA 59.414 37.500 0.00 0.00 0.00 2.29
1552 3747 3.451141 TGACATGCAAGGGAAAACAAC 57.549 42.857 0.00 0.00 0.00 3.32
1553 3748 4.686191 ATTGACATGCAAGGGAAAACAA 57.314 36.364 0.00 0.00 40.42 2.83
1559 3756 3.229293 TGTTGAATTGACATGCAAGGGA 58.771 40.909 0.00 0.00 40.42 4.20
1569 3766 3.503363 TGACATCAGCCTGTTGAATTGAC 59.497 43.478 9.68 0.00 0.00 3.18
1570 3767 3.753815 TGACATCAGCCTGTTGAATTGA 58.246 40.909 9.68 0.00 0.00 2.57
1571 3768 4.713824 ATGACATCAGCCTGTTGAATTG 57.286 40.909 9.68 0.00 0.00 2.32
1572 3769 5.475719 CAAATGACATCAGCCTGTTGAATT 58.524 37.500 9.68 6.29 0.00 2.17
1573 3770 4.619863 GCAAATGACATCAGCCTGTTGAAT 60.620 41.667 9.68 0.83 0.00 2.57
1636 3835 2.009774 CATACAGCAGGGGAAAAGACG 58.990 52.381 0.00 0.00 0.00 4.18
1667 3872 5.374921 CAGGCAGGGATGATGAATATATCC 58.625 45.833 0.00 0.00 39.69 2.59
1739 3950 1.540363 CCAACGATGTTATAGCCGCCT 60.540 52.381 0.00 0.00 0.00 5.52
1775 3989 1.208776 TGACAGGAGGACATGAGCATG 59.791 52.381 8.82 8.82 44.15 4.06
1779 3993 4.330250 ACAAAATGACAGGAGGACATGAG 58.670 43.478 0.00 0.00 0.00 2.90
1789 4003 8.661352 AACCAATTCTTAAACAAAATGACAGG 57.339 30.769 0.00 0.00 0.00 4.00
1811 4025 8.622157 GGAGGAACTATATTTAGCTGAAAAACC 58.378 37.037 0.00 0.00 41.55 3.27
1828 4045 3.649843 ACATTATGGGACGGAGGAACTA 58.350 45.455 0.00 0.00 41.55 2.24
1832 4049 3.640029 GTCTTACATTATGGGACGGAGGA 59.360 47.826 0.00 0.00 0.00 3.71
1833 4050 3.552273 CGTCTTACATTATGGGACGGAGG 60.552 52.174 20.50 5.87 43.69 4.30
1834 4051 3.317149 TCGTCTTACATTATGGGACGGAG 59.683 47.826 24.35 8.70 46.20 4.63
1835 4052 3.289836 TCGTCTTACATTATGGGACGGA 58.710 45.455 24.35 15.08 46.20 4.69
1836 4053 3.720949 TCGTCTTACATTATGGGACGG 57.279 47.619 24.35 13.78 46.20 4.79
1838 4055 6.183360 TGCAAAATCGTCTTACATTATGGGAC 60.183 38.462 0.00 1.75 0.00 4.46
1839 4056 5.883115 TGCAAAATCGTCTTACATTATGGGA 59.117 36.000 0.00 0.00 0.00 4.37
1840 4057 6.130298 TGCAAAATCGTCTTACATTATGGG 57.870 37.500 0.00 0.00 0.00 4.00
1841 4058 6.197096 GCTTGCAAAATCGTCTTACATTATGG 59.803 38.462 0.00 0.00 0.00 2.74
1842 4059 6.968904 AGCTTGCAAAATCGTCTTACATTATG 59.031 34.615 0.00 0.00 0.00 1.90
1847 4064 3.058293 CCAGCTTGCAAAATCGTCTTACA 60.058 43.478 0.00 0.00 0.00 2.41
1849 4066 3.146066 ACCAGCTTGCAAAATCGTCTTA 58.854 40.909 0.00 0.00 0.00 2.10
1852 4069 2.053627 CAACCAGCTTGCAAAATCGTC 58.946 47.619 0.00 0.00 0.00 4.20
1853 4070 1.269726 CCAACCAGCTTGCAAAATCGT 60.270 47.619 0.00 0.00 0.00 3.73
1854 4071 1.000385 TCCAACCAGCTTGCAAAATCG 60.000 47.619 0.00 0.00 0.00 3.34
1855 4072 2.611224 CCTCCAACCAGCTTGCAAAATC 60.611 50.000 0.00 0.00 0.00 2.17
1856 4073 1.345415 CCTCCAACCAGCTTGCAAAAT 59.655 47.619 0.00 0.00 0.00 1.82
1857 4074 0.752054 CCTCCAACCAGCTTGCAAAA 59.248 50.000 0.00 0.00 0.00 2.44
1858 4075 0.106268 TCCTCCAACCAGCTTGCAAA 60.106 50.000 0.00 0.00 0.00 3.68
1859 4076 0.106268 TTCCTCCAACCAGCTTGCAA 60.106 50.000 0.00 0.00 0.00 4.08
1860 4077 0.538057 CTTCCTCCAACCAGCTTGCA 60.538 55.000 0.00 0.00 0.00 4.08
1861 4078 0.538287 ACTTCCTCCAACCAGCTTGC 60.538 55.000 0.00 0.00 0.00 4.01
1862 4079 2.859165 TACTTCCTCCAACCAGCTTG 57.141 50.000 0.00 0.00 0.00 4.01
1863 4080 4.388577 AATTACTTCCTCCAACCAGCTT 57.611 40.909 0.00 0.00 0.00 3.74
1864 4081 5.717119 ATAATTACTTCCTCCAACCAGCT 57.283 39.130 0.00 0.00 0.00 4.24
1865 4082 7.522236 GCATAATAATTACTTCCTCCAACCAGC 60.522 40.741 0.00 0.00 0.00 4.85
1866 4083 7.721399 AGCATAATAATTACTTCCTCCAACCAG 59.279 37.037 0.00 0.00 0.00 4.00
1867 4084 7.502226 CAGCATAATAATTACTTCCTCCAACCA 59.498 37.037 0.00 0.00 0.00 3.67
1868 4085 7.719633 TCAGCATAATAATTACTTCCTCCAACC 59.280 37.037 0.00 0.00 0.00 3.77
1869 4086 8.677148 TCAGCATAATAATTACTTCCTCCAAC 57.323 34.615 0.00 0.00 0.00 3.77
1870 4087 9.866655 AATCAGCATAATAATTACTTCCTCCAA 57.133 29.630 0.00 0.00 0.00 3.53
1871 4088 9.507329 GAATCAGCATAATAATTACTTCCTCCA 57.493 33.333 0.00 0.00 0.00 3.86
1872 4089 9.732130 AGAATCAGCATAATAATTACTTCCTCC 57.268 33.333 0.00 0.00 0.00 4.30
1874 4091 9.007901 GCAGAATCAGCATAATAATTACTTCCT 57.992 33.333 0.00 0.00 0.00 3.36
1875 4092 9.007901 AGCAGAATCAGCATAATAATTACTTCC 57.992 33.333 0.00 0.00 0.00 3.46
1949 4189 0.396139 AATACTGGAGTACCGCCCGA 60.396 55.000 0.33 0.00 39.42 5.14
1955 4195 5.070446 TCCATCATCACAATACTGGAGTACC 59.930 44.000 0.00 0.00 32.72 3.34
1982 4222 0.948678 TTTAACAGCAACTCACCGGC 59.051 50.000 0.00 0.00 0.00 6.13
2037 4281 3.197116 GGTGGGAGGAGAAACGAATAAGA 59.803 47.826 0.00 0.00 0.00 2.10
2173 5025 9.291664 TCATTGAAAGTTTTAAAAGTACAACCG 57.708 29.630 20.40 16.66 0.00 4.44
2186 5038 8.697507 AAGACCTACTCATCATTGAAAGTTTT 57.302 30.769 9.53 0.00 0.00 2.43
2208 5067 3.254060 GCAATCTCTGCGAAGTGTAAGA 58.746 45.455 0.00 0.00 42.37 2.10
2360 5243 5.543507 AGCTGGATATTAGTTGGAGTCAG 57.456 43.478 0.00 0.00 0.00 3.51
2361 5244 5.189736 ACAAGCTGGATATTAGTTGGAGTCA 59.810 40.000 0.00 0.00 0.00 3.41
2362 5245 5.675538 ACAAGCTGGATATTAGTTGGAGTC 58.324 41.667 0.00 0.00 0.00 3.36
2363 5246 5.700402 ACAAGCTGGATATTAGTTGGAGT 57.300 39.130 0.00 0.00 0.00 3.85
2493 5466 8.258007 TGGCATTAGCATATACCTCTACAATAC 58.742 37.037 0.00 0.00 44.61 1.89
2564 5537 5.410746 CCAAATATATCTCGCAAGCACTCAT 59.589 40.000 0.00 0.00 37.18 2.90
2569 5542 4.702831 TGTCCAAATATATCTCGCAAGCA 58.297 39.130 0.00 0.00 37.18 3.91
2570 5543 4.991056 TCTGTCCAAATATATCTCGCAAGC 59.009 41.667 0.00 0.00 37.18 4.01
2590 5563 7.554118 ACATTGTTAGTTACATTCAGGGATCTG 59.446 37.037 0.00 0.00 38.25 2.90
2592 5565 7.865706 ACATTGTTAGTTACATTCAGGGATC 57.134 36.000 0.00 0.00 36.44 3.36
2640 5614 3.159213 ACATCAGGGCTTCATGAACAA 57.841 42.857 3.38 0.00 0.00 2.83
2792 5769 4.802876 AGACGCTAATACCTGTACGTAC 57.197 45.455 18.90 18.90 33.31 3.67
2976 6071 8.237811 ACATAATGGTGAATTCCTGTTTATCC 57.762 34.615 2.27 0.00 0.00 2.59
3207 6499 0.579630 TGCGAGTTTAGCAACACACG 59.420 50.000 0.00 0.00 42.18 4.49
3220 6512 7.440523 ACTTAAATTTCTTCAGATTGCGAGT 57.559 32.000 0.00 0.00 0.00 4.18
3261 6554 9.816354 AAAGTTGAAAGCTAAACACACATTAAT 57.184 25.926 8.92 0.00 0.00 1.40
3381 6703 7.496920 TCACATTTTCAGTGGCTCAGAATATAG 59.503 37.037 0.00 0.00 37.58 1.31
3444 6768 2.745968 AGTTTGGGAAGAAACCTGCAA 58.254 42.857 0.00 0.00 36.63 4.08
3569 6896 5.953183 TCTTCGAAACATGGATCAAAATGG 58.047 37.500 0.00 0.00 0.00 3.16
3582 6909 5.483811 TGCTACCATGTAATCTTCGAAACA 58.516 37.500 0.00 0.48 0.00 2.83
3775 8146 1.127343 ATTCTACCTGCTGAGGAGGC 58.873 55.000 20.69 0.00 42.93 4.70
3799 8175 5.348986 GCGTCACTAGTTCCAATATGAAGA 58.651 41.667 0.00 0.00 0.00 2.87
3800 8176 4.207224 CGCGTCACTAGTTCCAATATGAAG 59.793 45.833 0.00 0.00 0.00 3.02
3802 8178 3.490249 CCGCGTCACTAGTTCCAATATGA 60.490 47.826 4.92 0.00 0.00 2.15
3803 8179 2.794910 CCGCGTCACTAGTTCCAATATG 59.205 50.000 4.92 0.00 0.00 1.78
3804 8180 2.802057 GCCGCGTCACTAGTTCCAATAT 60.802 50.000 4.92 0.00 0.00 1.28
3805 8181 1.470285 GCCGCGTCACTAGTTCCAATA 60.470 52.381 4.92 0.00 0.00 1.90
3808 8184 1.812686 AAGCCGCGTCACTAGTTCCA 61.813 55.000 4.92 0.00 0.00 3.53
3809 8185 0.171903 TAAGCCGCGTCACTAGTTCC 59.828 55.000 4.92 0.00 0.00 3.62
3820 8197 0.658829 CATCGAGTCTCTAAGCCGCG 60.659 60.000 0.00 0.00 0.00 6.46
3822 8199 2.356382 ACTTCATCGAGTCTCTAAGCCG 59.644 50.000 0.00 0.00 0.00 5.52
3897 8274 6.013379 AGACCAATCCAGTCTTCTTGATACAA 60.013 38.462 0.00 0.00 41.87 2.41
4112 8498 0.404426 TCGAGGACTGAAGGAGGACA 59.596 55.000 0.00 0.00 0.00 4.02
4137 8529 0.329596 GGCAAGAAGATGGTGGGTCT 59.670 55.000 0.00 0.00 0.00 3.85
4140 8532 0.682209 CCTGGCAAGAAGATGGTGGG 60.682 60.000 0.00 0.00 0.00 4.61
4151 8543 2.428171 CCAACATTATGTCCCTGGCAAG 59.572 50.000 0.00 0.00 0.00 4.01
4155 8547 3.638160 CCAATCCAACATTATGTCCCTGG 59.362 47.826 7.94 7.94 29.31 4.45
4162 8555 4.220382 ACACCACACCAATCCAACATTATG 59.780 41.667 0.00 0.00 0.00 1.90
4169 8562 7.142995 TGATATATACACCACACCAATCCAA 57.857 36.000 0.00 0.00 0.00 3.53
4170 8563 6.755542 TGATATATACACCACACCAATCCA 57.244 37.500 0.00 0.00 0.00 3.41
4171 8564 8.103305 AGAATGATATATACACCACACCAATCC 58.897 37.037 0.00 0.00 0.00 3.01
4173 8566 9.866655 AAAGAATGATATATACACCACACCAAT 57.133 29.630 0.00 0.00 0.00 3.16
4178 8577 9.898152 TGAACAAAGAATGATATATACACCACA 57.102 29.630 0.00 0.00 0.00 4.17
4190 8589 7.059202 AGGAAAAGCTTGAACAAAGAATGAT 57.941 32.000 0.00 0.00 38.24 2.45
4216 8615 6.200475 GGTCTTCTACAAAGCGATAATACCAC 59.800 42.308 0.00 0.00 0.00 4.16
4220 8619 6.869695 TGTGGTCTTCTACAAAGCGATAATA 58.130 36.000 0.00 0.00 32.32 0.98
4223 8622 4.744570 CTGTGGTCTTCTACAAAGCGATA 58.255 43.478 0.00 0.00 34.80 2.92
4269 8669 7.973048 TCTATTAAGGACCTGACATGTAACT 57.027 36.000 0.00 0.00 0.00 2.24
4291 8691 8.524487 AGTAGTAAGACGAACATGAGAAAATCT 58.476 33.333 0.00 0.00 0.00 2.40
4292 8692 8.690680 AGTAGTAAGACGAACATGAGAAAATC 57.309 34.615 0.00 0.00 0.00 2.17
4323 8726 8.821894 AGACGAACATGAGAAAATCTATTAAGC 58.178 33.333 0.00 0.00 0.00 3.09
4327 8730 9.653287 TGTAAGACGAACATGAGAAAATCTATT 57.347 29.630 0.00 0.00 0.00 1.73
4328 8731 9.823647 ATGTAAGACGAACATGAGAAAATCTAT 57.176 29.630 0.00 0.00 36.24 1.98
4330 8733 9.823647 ATATGTAAGACGAACATGAGAAAATCT 57.176 29.630 0.00 0.00 38.05 2.40
4336 8739 9.516314 CAAAGTATATGTAAGACGAACATGAGA 57.484 33.333 0.00 0.00 38.05 3.27
4356 8765 8.508062 TGCGAAAATCTATTAAGCAACAAAGTA 58.492 29.630 0.00 0.00 0.00 2.24
4369 8778 6.422776 AAGACGAACATGCGAAAATCTATT 57.577 33.333 0.00 0.00 34.83 1.73
4370 8779 6.533723 TGTAAGACGAACATGCGAAAATCTAT 59.466 34.615 0.00 0.00 34.83 1.98
4371 8780 5.865013 TGTAAGACGAACATGCGAAAATCTA 59.135 36.000 0.00 0.00 34.83 1.98
4372 8781 4.688879 TGTAAGACGAACATGCGAAAATCT 59.311 37.500 0.00 0.00 34.83 2.40
4373 8782 4.953269 TGTAAGACGAACATGCGAAAATC 58.047 39.130 0.00 0.00 34.83 2.17
4374 8783 5.447279 GGATGTAAGACGAACATGCGAAAAT 60.447 40.000 0.00 0.00 37.69 1.82
4376 8785 3.369756 GGATGTAAGACGAACATGCGAAA 59.630 43.478 0.00 0.00 37.69 3.46
4377 8786 2.927477 GGATGTAAGACGAACATGCGAA 59.073 45.455 0.00 0.00 37.69 4.70
4378 8787 2.536365 GGATGTAAGACGAACATGCGA 58.464 47.619 0.00 0.00 37.69 5.10
4379 8788 1.593006 GGGATGTAAGACGAACATGCG 59.407 52.381 0.00 0.00 44.07 4.73
4380 8789 2.627945 TGGGATGTAAGACGAACATGC 58.372 47.619 0.00 6.28 42.87 4.06
4381 8790 4.441792 TCATGGGATGTAAGACGAACATG 58.558 43.478 0.00 0.00 37.69 3.21
4382 8791 4.753516 TCATGGGATGTAAGACGAACAT 57.246 40.909 0.00 0.00 40.23 2.71
4383 8792 4.753516 ATCATGGGATGTAAGACGAACA 57.246 40.909 0.00 0.00 30.86 3.18
4384 8793 5.730568 GCAAATCATGGGATGTAAGACGAAC 60.731 44.000 0.00 0.00 32.92 3.95
4385 8794 4.335315 GCAAATCATGGGATGTAAGACGAA 59.665 41.667 0.00 0.00 32.92 3.85
4386 8795 3.876914 GCAAATCATGGGATGTAAGACGA 59.123 43.478 0.00 0.00 32.92 4.20
4387 8796 3.627123 TGCAAATCATGGGATGTAAGACG 59.373 43.478 0.00 0.00 32.92 4.18
4388 8797 5.581126 TTGCAAATCATGGGATGTAAGAC 57.419 39.130 0.00 0.00 32.92 3.01
4389 8798 4.098349 GCTTGCAAATCATGGGATGTAAGA 59.902 41.667 19.36 0.00 32.92 2.10
4390 8799 4.098960 AGCTTGCAAATCATGGGATGTAAG 59.901 41.667 0.00 14.31 32.92 2.34
4391 8800 4.025360 AGCTTGCAAATCATGGGATGTAA 58.975 39.130 0.00 0.00 32.92 2.41
4392 8801 3.634504 AGCTTGCAAATCATGGGATGTA 58.365 40.909 0.00 0.00 32.92 2.29
4393 8802 2.463752 AGCTTGCAAATCATGGGATGT 58.536 42.857 0.00 0.00 32.92 3.06
4394 8803 3.132289 AGAAGCTTGCAAATCATGGGATG 59.868 43.478 2.10 0.00 32.92 3.51
4395 8804 3.371965 AGAAGCTTGCAAATCATGGGAT 58.628 40.909 2.10 0.00 34.43 3.85
4396 8805 2.811410 AGAAGCTTGCAAATCATGGGA 58.189 42.857 2.10 0.00 0.00 4.37
4397 8806 3.444742 TGTAGAAGCTTGCAAATCATGGG 59.555 43.478 2.10 0.00 0.00 4.00
4398 8807 4.707030 TGTAGAAGCTTGCAAATCATGG 57.293 40.909 2.10 0.00 0.00 3.66
4411 8820 3.006003 GGGAGTACTAGGCATGTAGAAGC 59.994 52.174 0.00 0.00 0.00 3.86
4429 8842 2.389715 AGTAATTCCAGACGGAGGGAG 58.610 52.381 0.00 0.00 44.10 4.30
4432 8845 3.522553 GACAAGTAATTCCAGACGGAGG 58.477 50.000 0.00 0.00 44.10 4.30
4433 8846 3.179830 CGACAAGTAATTCCAGACGGAG 58.820 50.000 0.00 0.00 44.10 4.63
4434 8847 2.094390 CCGACAAGTAATTCCAGACGGA 60.094 50.000 0.00 0.00 40.16 4.69
4435 8848 2.094390 TCCGACAAGTAATTCCAGACGG 60.094 50.000 0.00 0.00 39.30 4.79
4436 8849 3.119602 TCTCCGACAAGTAATTCCAGACG 60.120 47.826 0.00 0.00 0.00 4.18
4437 8850 4.158025 TCTCTCCGACAAGTAATTCCAGAC 59.842 45.833 0.00 0.00 0.00 3.51
4438 8851 4.341487 TCTCTCCGACAAGTAATTCCAGA 58.659 43.478 0.00 0.00 0.00 3.86
4439 8852 4.720649 TCTCTCCGACAAGTAATTCCAG 57.279 45.455 0.00 0.00 0.00 3.86
4440 8853 6.127101 TCTATCTCTCCGACAAGTAATTCCA 58.873 40.000 0.00 0.00 0.00 3.53
4441 8854 6.636562 TCTATCTCTCCGACAAGTAATTCC 57.363 41.667 0.00 0.00 0.00 3.01
4442 8855 7.593273 CACATCTATCTCTCCGACAAGTAATTC 59.407 40.741 0.00 0.00 0.00 2.17
4443 8856 7.068839 ACACATCTATCTCTCCGACAAGTAATT 59.931 37.037 0.00 0.00 0.00 1.40
4444 8857 6.547880 ACACATCTATCTCTCCGACAAGTAAT 59.452 38.462 0.00 0.00 0.00 1.89
4445 8858 5.886474 ACACATCTATCTCTCCGACAAGTAA 59.114 40.000 0.00 0.00 0.00 2.24
4446 8859 5.437946 ACACATCTATCTCTCCGACAAGTA 58.562 41.667 0.00 0.00 0.00 2.24
4447 8860 4.274147 ACACATCTATCTCTCCGACAAGT 58.726 43.478 0.00 0.00 0.00 3.16
4448 8861 4.578516 AGACACATCTATCTCTCCGACAAG 59.421 45.833 0.00 0.00 31.46 3.16
4449 8862 4.527944 AGACACATCTATCTCTCCGACAA 58.472 43.478 0.00 0.00 31.46 3.18
4450 8863 4.157849 AGACACATCTATCTCTCCGACA 57.842 45.455 0.00 0.00 31.46 4.35
4451 8864 6.432107 GTTTAGACACATCTATCTCTCCGAC 58.568 44.000 0.00 0.00 37.28 4.79
4452 8865 5.236695 CGTTTAGACACATCTATCTCTCCGA 59.763 44.000 0.00 0.00 37.28 4.55
4453 8866 5.007823 ACGTTTAGACACATCTATCTCTCCG 59.992 44.000 0.00 0.00 37.28 4.63
4454 8867 6.380095 ACGTTTAGACACATCTATCTCTCC 57.620 41.667 0.00 0.00 37.28 3.71
4508 8921 9.277565 CGTTTGGAATTACTTGTGATAGAAATG 57.722 33.333 0.00 0.00 0.00 2.32
4509 8922 8.458843 CCGTTTGGAATTACTTGTGATAGAAAT 58.541 33.333 0.00 0.00 37.49 2.17
4510 8923 7.662258 TCCGTTTGGAATTACTTGTGATAGAAA 59.338 33.333 0.00 0.00 42.85 2.52
4511 8924 7.162761 TCCGTTTGGAATTACTTGTGATAGAA 58.837 34.615 0.00 0.00 42.85 2.10
4512 8925 6.703319 TCCGTTTGGAATTACTTGTGATAGA 58.297 36.000 0.00 0.00 42.85 1.98
4513 8926 6.037172 CCTCCGTTTGGAATTACTTGTGATAG 59.963 42.308 0.00 0.00 45.87 2.08
4514 8927 5.878116 CCTCCGTTTGGAATTACTTGTGATA 59.122 40.000 0.00 0.00 45.87 2.15
4515 8928 4.700213 CCTCCGTTTGGAATTACTTGTGAT 59.300 41.667 0.00 0.00 45.87 3.06
4516 8929 4.069304 CCTCCGTTTGGAATTACTTGTGA 58.931 43.478 0.00 0.00 45.87 3.58
4517 8930 3.190535 CCCTCCGTTTGGAATTACTTGTG 59.809 47.826 0.00 0.00 45.87 3.33
4518 8931 3.073356 TCCCTCCGTTTGGAATTACTTGT 59.927 43.478 0.00 0.00 45.87 3.16
4519 8932 3.681593 TCCCTCCGTTTGGAATTACTTG 58.318 45.455 0.00 0.00 45.87 3.16
4520 8933 4.376225 TTCCCTCCGTTTGGAATTACTT 57.624 40.909 0.00 0.00 45.87 2.24
4521 8934 4.586306 ATTCCCTCCGTTTGGAATTACT 57.414 40.909 4.30 0.00 46.68 2.24
4522 8935 6.954487 AATATTCCCTCCGTTTGGAATTAC 57.046 37.500 12.89 0.00 46.68 1.89
4523 8936 7.808218 AGTAATATTCCCTCCGTTTGGAATTA 58.192 34.615 12.89 2.10 46.68 1.40
4524 8937 6.669631 AGTAATATTCCCTCCGTTTGGAATT 58.330 36.000 12.89 2.85 46.68 2.17
4526 8939 5.190132 TGAGTAATATTCCCTCCGTTTGGAA 59.810 40.000 10.83 0.00 45.87 3.53
4527 8940 4.717778 TGAGTAATATTCCCTCCGTTTGGA 59.282 41.667 10.83 0.00 43.88 3.53
4528 8941 4.814771 GTGAGTAATATTCCCTCCGTTTGG 59.185 45.833 10.83 0.00 0.00 3.28
4529 8942 5.424757 TGTGAGTAATATTCCCTCCGTTTG 58.575 41.667 10.83 0.00 0.00 2.93
4530 8943 5.189145 ACTGTGAGTAATATTCCCTCCGTTT 59.811 40.000 10.83 0.00 0.00 3.60
4531 8944 4.715297 ACTGTGAGTAATATTCCCTCCGTT 59.285 41.667 10.83 0.00 0.00 4.44
4532 8945 4.099573 CACTGTGAGTAATATTCCCTCCGT 59.900 45.833 0.32 5.08 0.00 4.69
4533 8946 4.621991 CACTGTGAGTAATATTCCCTCCG 58.378 47.826 0.32 4.64 0.00 4.63
4534 8947 4.141711 TGCACTGTGAGTAATATTCCCTCC 60.142 45.833 12.86 5.29 0.00 4.30
4535 8948 5.023533 TGCACTGTGAGTAATATTCCCTC 57.976 43.478 12.86 0.00 0.00 4.30
4536 8949 4.471386 ACTGCACTGTGAGTAATATTCCCT 59.529 41.667 12.86 0.00 0.00 4.20
4537 8950 4.770795 ACTGCACTGTGAGTAATATTCCC 58.229 43.478 12.86 0.00 0.00 3.97
4538 8951 8.438676 AATTACTGCACTGTGAGTAATATTCC 57.561 34.615 26.92 6.83 42.14 3.01
4543 8956 9.448438 TCATAAAATTACTGCACTGTGAGTAAT 57.552 29.630 24.19 24.19 43.92 1.89
4544 8957 8.840833 TCATAAAATTACTGCACTGTGAGTAA 57.159 30.769 22.77 22.77 38.65 2.24
4545 8958 9.448438 AATCATAAAATTACTGCACTGTGAGTA 57.552 29.630 12.86 12.83 0.00 2.59
4546 8959 7.928307 ATCATAAAATTACTGCACTGTGAGT 57.072 32.000 12.86 13.77 0.00 3.41
4547 8960 9.069078 CAAATCATAAAATTACTGCACTGTGAG 57.931 33.333 12.86 8.64 0.00 3.51
4548 8961 7.541783 GCAAATCATAAAATTACTGCACTGTGA 59.458 33.333 12.86 0.00 0.00 3.58
4549 8962 7.328982 TGCAAATCATAAAATTACTGCACTGTG 59.671 33.333 2.76 2.76 31.01 3.66
4554 8967 9.270640 ACTTTTGCAAATCATAAAATTACTGCA 57.729 25.926 13.65 0.00 33.02 4.41
4584 8997 1.930567 AAAAATCGGCAGATGCATGC 58.069 45.000 11.82 11.82 45.74 4.06
4585 8998 4.297299 ACTAAAAATCGGCAGATGCATG 57.703 40.909 2.46 0.00 44.36 4.06
4586 8999 5.126067 AGTACTAAAAATCGGCAGATGCAT 58.874 37.500 0.00 0.00 44.36 3.96
4587 9000 4.513442 AGTACTAAAAATCGGCAGATGCA 58.487 39.130 7.19 0.00 44.36 3.96
4588 9001 4.024809 GGAGTACTAAAAATCGGCAGATGC 60.025 45.833 0.00 0.00 37.14 3.91
4589 9002 4.511826 GGGAGTACTAAAAATCGGCAGATG 59.488 45.833 0.00 0.00 37.14 2.90
4590 9003 4.409247 AGGGAGTACTAAAAATCGGCAGAT 59.591 41.667 0.00 0.00 39.12 2.90
4591 9004 3.773119 AGGGAGTACTAAAAATCGGCAGA 59.227 43.478 0.00 0.00 0.00 4.26
4592 9005 4.120589 GAGGGAGTACTAAAAATCGGCAG 58.879 47.826 0.00 0.00 0.00 4.85
4593 9006 3.118519 GGAGGGAGTACTAAAAATCGGCA 60.119 47.826 0.00 0.00 0.00 5.69
4594 9007 3.118519 TGGAGGGAGTACTAAAAATCGGC 60.119 47.826 0.00 0.00 0.00 5.54
4595 9008 4.748277 TGGAGGGAGTACTAAAAATCGG 57.252 45.455 0.00 0.00 0.00 4.18
4596 9009 6.583562 AGAATGGAGGGAGTACTAAAAATCG 58.416 40.000 0.00 0.00 0.00 3.34
4597 9010 9.327628 GTTAGAATGGAGGGAGTACTAAAAATC 57.672 37.037 0.00 0.00 0.00 2.17
4598 9011 9.059023 AGTTAGAATGGAGGGAGTACTAAAAAT 57.941 33.333 0.00 0.00 0.00 1.82
4599 9012 8.445361 AGTTAGAATGGAGGGAGTACTAAAAA 57.555 34.615 0.00 0.00 0.00 1.94
4600 9013 8.445361 AAGTTAGAATGGAGGGAGTACTAAAA 57.555 34.615 0.00 0.00 0.00 1.52
4601 9014 8.319146 CAAAGTTAGAATGGAGGGAGTACTAAA 58.681 37.037 0.00 0.00 0.00 1.85
4602 9015 7.580882 GCAAAGTTAGAATGGAGGGAGTACTAA 60.581 40.741 0.00 0.00 0.00 2.24
4603 9016 6.127140 GCAAAGTTAGAATGGAGGGAGTACTA 60.127 42.308 0.00 0.00 0.00 1.82
4605 9018 4.876679 GCAAAGTTAGAATGGAGGGAGTAC 59.123 45.833 0.00 0.00 0.00 2.73
4606 9019 4.080526 GGCAAAGTTAGAATGGAGGGAGTA 60.081 45.833 0.00 0.00 0.00 2.59
4607 9020 3.308473 GGCAAAGTTAGAATGGAGGGAGT 60.308 47.826 0.00 0.00 0.00 3.85
4608 9021 3.282885 GGCAAAGTTAGAATGGAGGGAG 58.717 50.000 0.00 0.00 0.00 4.30
4609 9022 2.025321 GGGCAAAGTTAGAATGGAGGGA 60.025 50.000 0.00 0.00 0.00 4.20
4611 9024 3.372440 AGGGCAAAGTTAGAATGGAGG 57.628 47.619 0.00 0.00 0.00 4.30
4612 9025 5.355350 CACTTAGGGCAAAGTTAGAATGGAG 59.645 44.000 2.08 0.00 37.61 3.86
4613 9026 5.013704 TCACTTAGGGCAAAGTTAGAATGGA 59.986 40.000 2.08 0.00 37.61 3.41
4614 9027 5.253330 TCACTTAGGGCAAAGTTAGAATGG 58.747 41.667 2.08 0.00 37.61 3.16
4615 9028 6.817765 TTCACTTAGGGCAAAGTTAGAATG 57.182 37.500 2.08 0.00 37.61 2.67
4616 9029 7.004691 AGTTTCACTTAGGGCAAAGTTAGAAT 58.995 34.615 2.08 0.00 37.61 2.40
4617 9030 6.362248 AGTTTCACTTAGGGCAAAGTTAGAA 58.638 36.000 2.08 2.36 37.61 2.10
4618 9031 5.937111 AGTTTCACTTAGGGCAAAGTTAGA 58.063 37.500 2.08 0.00 37.61 2.10
4619 9032 6.486993 AGAAGTTTCACTTAGGGCAAAGTTAG 59.513 38.462 2.08 0.00 38.80 2.34
4620 9033 6.362248 AGAAGTTTCACTTAGGGCAAAGTTA 58.638 36.000 2.08 0.00 38.80 2.24
4621 9034 5.201243 AGAAGTTTCACTTAGGGCAAAGTT 58.799 37.500 2.08 1.23 38.80 2.66
4623 9036 5.774498 AAGAAGTTTCACTTAGGGCAAAG 57.226 39.130 0.00 0.00 38.80 2.77
4624 9037 6.264518 CCTAAAGAAGTTTCACTTAGGGCAAA 59.735 38.462 17.06 0.00 38.80 3.68
4627 9040 5.314529 ACCTAAAGAAGTTTCACTTAGGGC 58.685 41.667 23.05 0.00 42.91 5.19
4629 9042 8.446599 TCAAACCTAAAGAAGTTTCACTTAGG 57.553 34.615 20.30 20.30 43.52 2.69
4651 9314 6.822442 TGGTGGCGTAGATAGAATTAATCAA 58.178 36.000 0.00 0.00 0.00 2.57
4655 9318 9.268268 CTAATTTGGTGGCGTAGATAGAATTAA 57.732 33.333 0.00 0.00 0.00 1.40
4656 9319 8.426489 ACTAATTTGGTGGCGTAGATAGAATTA 58.574 33.333 0.00 0.00 0.00 1.40
4659 9322 6.229936 ACTAATTTGGTGGCGTAGATAGAA 57.770 37.500 0.00 0.00 0.00 2.10
4662 9325 6.408035 TGAAACTAATTTGGTGGCGTAGATA 58.592 36.000 0.00 0.00 0.00 1.98
4724 9451 4.156008 CCCTCCGTTCCAAACTTCTTTATG 59.844 45.833 0.00 0.00 0.00 1.90
4725 9452 4.042435 TCCCTCCGTTCCAAACTTCTTTAT 59.958 41.667 0.00 0.00 0.00 1.40
4728 9455 1.772453 TCCCTCCGTTCCAAACTTCTT 59.228 47.619 0.00 0.00 0.00 2.52
4730 9457 1.071857 ACTCCCTCCGTTCCAAACTTC 59.928 52.381 0.00 0.00 0.00 3.01
4731 9458 1.137697 ACTCCCTCCGTTCCAAACTT 58.862 50.000 0.00 0.00 0.00 2.66
4738 9465 4.015764 ACTCTAAACTACTCCCTCCGTTC 58.984 47.826 0.00 0.00 0.00 3.95
4739 9466 4.044946 ACTCTAAACTACTCCCTCCGTT 57.955 45.455 0.00 0.00 0.00 4.44
4740 9467 3.735720 ACTCTAAACTACTCCCTCCGT 57.264 47.619 0.00 0.00 0.00 4.69
4741 9468 4.036616 GCTAACTCTAAACTACTCCCTCCG 59.963 50.000 0.00 0.00 0.00 4.63
4742 9469 4.341806 GGCTAACTCTAAACTACTCCCTCC 59.658 50.000 0.00 0.00 0.00 4.30
4743 9470 4.036616 CGGCTAACTCTAAACTACTCCCTC 59.963 50.000 0.00 0.00 0.00 4.30
4744 9471 3.952967 CGGCTAACTCTAAACTACTCCCT 59.047 47.826 0.00 0.00 0.00 4.20
4746 9473 3.129988 TGCGGCTAACTCTAAACTACTCC 59.870 47.826 0.00 0.00 0.00 3.85
4747 9474 4.367386 TGCGGCTAACTCTAAACTACTC 57.633 45.455 0.00 0.00 0.00 2.59
4752 9494 3.007635 ACCATTGCGGCTAACTCTAAAC 58.992 45.455 0.00 0.00 39.03 2.01
4765 9507 0.953471 TTTGGACTCCGACCATTGCG 60.953 55.000 0.00 0.00 37.26 4.85
4769 9511 4.658901 ACCTTATATTTGGACTCCGACCAT 59.341 41.667 0.00 0.00 37.26 3.55
4770 9512 4.035112 ACCTTATATTTGGACTCCGACCA 58.965 43.478 1.34 0.00 35.47 4.02
4771 9513 4.684484 ACCTTATATTTGGACTCCGACC 57.316 45.455 1.34 0.00 0.00 4.79
4773 9515 7.011994 TGGTATACCTTATATTTGGACTCCGA 58.988 38.462 22.41 0.00 36.82 4.55
4774 9516 7.095270 GTGGTATACCTTATATTTGGACTCCG 58.905 42.308 22.41 0.00 36.82 4.63
4776 9518 9.841295 TTTGTGGTATACCTTATATTTGGACTC 57.159 33.333 22.41 0.00 36.82 3.36
4777 9519 9.623000 GTTTGTGGTATACCTTATATTTGGACT 57.377 33.333 22.41 0.00 36.82 3.85
4778 9520 8.553696 CGTTTGTGGTATACCTTATATTTGGAC 58.446 37.037 22.41 8.81 36.82 4.02
4779 9521 7.227116 GCGTTTGTGGTATACCTTATATTTGGA 59.773 37.037 22.41 0.00 36.82 3.53
4780 9522 7.357303 GCGTTTGTGGTATACCTTATATTTGG 58.643 38.462 22.41 5.46 36.82 3.28
4781 9523 7.227910 AGGCGTTTGTGGTATACCTTATATTTG 59.772 37.037 22.41 7.23 36.82 2.32
4782 9524 7.284820 AGGCGTTTGTGGTATACCTTATATTT 58.715 34.615 22.41 0.00 36.82 1.40
4783 9525 6.834107 AGGCGTTTGTGGTATACCTTATATT 58.166 36.000 22.41 0.00 36.82 1.28
4784 9526 6.042322 TGAGGCGTTTGTGGTATACCTTATAT 59.958 38.462 22.41 0.51 36.82 0.86
4785 9527 5.363292 TGAGGCGTTTGTGGTATACCTTATA 59.637 40.000 22.41 0.00 36.82 0.98
4786 9528 4.162698 TGAGGCGTTTGTGGTATACCTTAT 59.837 41.667 22.41 0.00 36.82 1.73
4787 9529 3.514706 TGAGGCGTTTGTGGTATACCTTA 59.485 43.478 22.41 8.83 36.82 2.69
4788 9530 2.303600 TGAGGCGTTTGTGGTATACCTT 59.696 45.455 22.41 0.00 36.82 3.50
4789 9531 1.903860 TGAGGCGTTTGTGGTATACCT 59.096 47.619 22.41 0.00 36.82 3.08
4790 9532 2.389962 TGAGGCGTTTGTGGTATACC 57.610 50.000 15.50 15.50 0.00 2.73
4791 9533 6.613755 ATTTATGAGGCGTTTGTGGTATAC 57.386 37.500 0.00 0.00 0.00 1.47
4798 9540 6.037172 CACTAGCTAATTTATGAGGCGTTTGT 59.963 38.462 0.00 0.00 0.00 2.83
4826 9568 7.499232 GTGTGTAAGCTAATCTTATGGACCATT 59.501 37.037 13.40 0.00 39.29 3.16
4827 9569 6.992715 GTGTGTAAGCTAATCTTATGGACCAT 59.007 38.462 12.67 12.67 39.29 3.55
4830 9572 7.868415 CCTAGTGTGTAAGCTAATCTTATGGAC 59.132 40.741 0.00 0.00 39.29 4.02
4843 9585 6.496338 AGTAAAATTGCCTAGTGTGTAAGC 57.504 37.500 0.00 0.00 0.00 3.09
4906 9649 1.666888 GGTTGGCATCTTGTTGCTTCG 60.667 52.381 0.00 0.00 42.38 3.79
4959 9708 0.248907 CGACATGACGGGCTATCGTT 60.249 55.000 9.78 0.00 43.96 3.85
4967 9716 1.153823 GACCAGACGACATGACGGG 60.154 63.158 20.92 14.59 37.61 5.28
4985 9734 0.317160 TATCTATGGCTTCGGCGTGG 59.683 55.000 6.85 1.82 42.91 4.94
4988 9737 0.108615 CCCTATCTATGGCTTCGGCG 60.109 60.000 0.00 0.00 42.91 6.46
5019 9768 0.318441 CGGGAGAAGAGCAGTTGACA 59.682 55.000 0.00 0.00 0.00 3.58
5024 9773 0.534412 CATGACGGGAGAAGAGCAGT 59.466 55.000 0.00 0.00 0.00 4.40
5037 9786 0.173481 ATGGACCAGACGACATGACG 59.827 55.000 15.87 15.87 39.31 4.35
5038 9787 1.645034 CATGGACCAGACGACATGAC 58.355 55.000 0.00 0.00 42.39 3.06
5039 9788 0.108186 GCATGGACCAGACGACATGA 60.108 55.000 0.00 0.00 42.39 3.07
5040 9789 1.091771 GGCATGGACCAGACGACATG 61.092 60.000 0.00 0.00 42.61 3.21
5041 9790 1.221840 GGCATGGACCAGACGACAT 59.778 57.895 0.00 0.00 0.00 3.06
5042 9791 2.662596 GGCATGGACCAGACGACA 59.337 61.111 0.00 0.00 0.00 4.35
5043 9792 2.501223 TTCGGCATGGACCAGACGAC 62.501 60.000 17.96 3.17 0.00 4.34
5044 9793 2.225791 CTTCGGCATGGACCAGACGA 62.226 60.000 15.30 15.30 0.00 4.20
5045 9794 1.811266 CTTCGGCATGGACCAGACG 60.811 63.158 11.63 11.63 0.00 4.18
5046 9795 2.109126 GCTTCGGCATGGACCAGAC 61.109 63.158 0.00 0.00 41.33 3.51
5047 9796 2.268920 GCTTCGGCATGGACCAGA 59.731 61.111 0.00 0.00 41.33 3.86
5048 9797 2.825836 GGCTTCGGCATGGACCAG 60.826 66.667 0.00 0.00 43.96 4.00
5049 9798 2.982643 ATGGCTTCGGCATGGACCA 61.983 57.895 0.00 0.00 46.89 4.02
5050 9799 0.886490 CTATGGCTTCGGCATGGACC 60.886 60.000 12.45 0.00 46.68 4.46
5051 9800 2.621763 CTATGGCTTCGGCATGGAC 58.378 57.895 12.45 0.00 46.68 4.02
5056 9805 1.367471 CCGATCTATGGCTTCGGCA 59.633 57.895 7.21 0.00 45.04 5.69
5057 9806 4.268687 CCGATCTATGGCTTCGGC 57.731 61.111 7.21 0.00 45.04 5.54
5059 9808 1.374758 GCCCCGATCTATGGCTTCG 60.375 63.158 9.12 0.00 42.01 3.79
5060 9809 1.374758 CGCCCCGATCTATGGCTTC 60.375 63.158 13.13 0.00 43.12 3.86
5061 9810 2.743718 CGCCCCGATCTATGGCTT 59.256 61.111 13.13 0.00 43.12 4.35
5062 9811 3.314331 CCGCCCCGATCTATGGCT 61.314 66.667 13.13 0.00 43.12 4.75
5063 9812 2.185310 ATTCCGCCCCGATCTATGGC 62.185 60.000 6.88 6.88 41.85 4.40
5064 9813 0.391661 CATTCCGCCCCGATCTATGG 60.392 60.000 0.00 0.00 0.00 2.74
5065 9814 0.608130 TCATTCCGCCCCGATCTATG 59.392 55.000 0.00 0.00 0.00 2.23
5066 9815 1.348064 TTCATTCCGCCCCGATCTAT 58.652 50.000 0.00 0.00 0.00 1.98
5067 9816 1.348064 ATTCATTCCGCCCCGATCTA 58.652 50.000 0.00 0.00 0.00 1.98
5068 9817 1.348064 TATTCATTCCGCCCCGATCT 58.652 50.000 0.00 0.00 0.00 2.75
5069 9818 2.009774 CATATTCATTCCGCCCCGATC 58.990 52.381 0.00 0.00 0.00 3.69
5070 9819 1.351017 ACATATTCATTCCGCCCCGAT 59.649 47.619 0.00 0.00 0.00 4.18
5071 9820 0.762418 ACATATTCATTCCGCCCCGA 59.238 50.000 0.00 0.00 0.00 5.14
5072 9821 1.156736 GACATATTCATTCCGCCCCG 58.843 55.000 0.00 0.00 0.00 5.73
5073 9822 2.270352 TGACATATTCATTCCGCCCC 57.730 50.000 0.00 0.00 0.00 5.80
5074 9823 3.003689 CAGTTGACATATTCATTCCGCCC 59.996 47.826 0.00 0.00 32.84 6.13
5075 9824 3.548818 GCAGTTGACATATTCATTCCGCC 60.549 47.826 0.00 0.00 32.84 6.13
5076 9825 3.313526 AGCAGTTGACATATTCATTCCGC 59.686 43.478 0.00 0.00 32.84 5.54
5077 9826 4.813161 AGAGCAGTTGACATATTCATTCCG 59.187 41.667 0.00 0.00 32.84 4.30
5078 9827 6.541641 AGAAGAGCAGTTGACATATTCATTCC 59.458 38.462 0.00 0.00 32.84 3.01
5079 9828 7.254727 GGAGAAGAGCAGTTGACATATTCATTC 60.255 40.741 0.00 0.00 32.84 2.67
5080 9829 6.541641 GGAGAAGAGCAGTTGACATATTCATT 59.458 38.462 0.00 0.00 32.84 2.57
5081 9830 6.054295 GGAGAAGAGCAGTTGACATATTCAT 58.946 40.000 0.00 0.00 32.84 2.57
5082 9831 5.046376 TGGAGAAGAGCAGTTGACATATTCA 60.046 40.000 0.00 0.00 0.00 2.57
5083 9832 5.293079 GTGGAGAAGAGCAGTTGACATATTC 59.707 44.000 0.00 0.00 0.00 1.75
5084 9833 5.181748 GTGGAGAAGAGCAGTTGACATATT 58.818 41.667 0.00 0.00 0.00 1.28
5085 9834 4.383552 GGTGGAGAAGAGCAGTTGACATAT 60.384 45.833 0.00 0.00 0.00 1.78
5086 9835 3.055819 GGTGGAGAAGAGCAGTTGACATA 60.056 47.826 0.00 0.00 0.00 2.29
5087 9836 2.289945 GGTGGAGAAGAGCAGTTGACAT 60.290 50.000 0.00 0.00 0.00 3.06
5088 9837 1.070758 GGTGGAGAAGAGCAGTTGACA 59.929 52.381 0.00 0.00 0.00 3.58
5089 9838 1.070758 TGGTGGAGAAGAGCAGTTGAC 59.929 52.381 0.00 0.00 0.00 3.18
5090 9839 1.345741 CTGGTGGAGAAGAGCAGTTGA 59.654 52.381 0.00 0.00 34.81 3.18
5091 9840 1.805869 CTGGTGGAGAAGAGCAGTTG 58.194 55.000 0.00 0.00 34.81 3.16
5093 9842 3.155897 ACTGGTGGAGAAGAGCAGT 57.844 52.632 0.00 0.00 45.14 4.40
5094 9843 3.594134 CTTTACTGGTGGAGAAGAGCAG 58.406 50.000 0.00 0.00 43.23 4.24
5095 9844 2.289694 GCTTTACTGGTGGAGAAGAGCA 60.290 50.000 0.00 0.00 0.00 4.26
5096 9845 2.289694 TGCTTTACTGGTGGAGAAGAGC 60.290 50.000 0.00 0.00 0.00 4.09
5097 9846 3.007398 AGTGCTTTACTGGTGGAGAAGAG 59.993 47.826 0.00 0.00 38.49 2.85
5098 9847 2.972713 AGTGCTTTACTGGTGGAGAAGA 59.027 45.455 0.00 0.00 38.49 2.87
5099 9848 3.409026 AGTGCTTTACTGGTGGAGAAG 57.591 47.619 0.00 0.00 38.49 2.85
5100 9849 4.537135 CTAGTGCTTTACTGGTGGAGAA 57.463 45.455 0.00 0.00 40.65 2.87
5107 9856 5.107065 GCAAACAGTACTAGTGCTTTACTGG 60.107 44.000 21.20 9.18 44.71 4.00
5108 9857 5.696724 AGCAAACAGTACTAGTGCTTTACTG 59.303 40.000 17.41 17.41 42.77 2.74
5109 9858 5.855045 AGCAAACAGTACTAGTGCTTTACT 58.145 37.500 11.16 1.83 42.77 2.24
5110 9859 5.694910 TGAGCAAACAGTACTAGTGCTTTAC 59.305 40.000 21.46 13.16 45.24 2.01
5111 9860 5.849510 TGAGCAAACAGTACTAGTGCTTTA 58.150 37.500 21.46 14.16 45.24 1.85
5112 9861 4.703897 TGAGCAAACAGTACTAGTGCTTT 58.296 39.130 21.46 1.81 45.24 3.51
5113 9862 4.336889 TGAGCAAACAGTACTAGTGCTT 57.663 40.909 21.46 10.49 45.24 3.91
5115 9864 4.849111 GATGAGCAAACAGTACTAGTGC 57.151 45.455 5.39 13.91 35.41 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.