Multiple sequence alignment - TraesCS4D01G365200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G365200 chr4D 100.000 2558 0 0 1 2558 509503323 509505880 0.000000e+00 4724.0
1 TraesCS4D01G365200 chr4D 99.726 731 2 0 1 731 667254 666524 0.000000e+00 1339.0
2 TraesCS4D01G365200 chr3D 100.000 725 0 0 1 725 475636072 475636796 0.000000e+00 1339.0
3 TraesCS4D01G365200 chr3D 95.990 399 14 2 1 398 25517128 25517525 0.000000e+00 647.0
4 TraesCS4D01G365200 chr3D 97.872 235 4 1 444 677 25517513 25517747 3.060000e-109 405.0
5 TraesCS4D01G365200 chr5D 88.315 1104 85 17 957 2026 422430667 422431760 0.000000e+00 1284.0
6 TraesCS4D01G365200 chr5D 94.872 156 6 2 805 959 60074233 60074079 2.540000e-60 243.0
7 TraesCS4D01G365200 chr5D 95.122 41 2 0 776 816 60074226 60074266 5.910000e-07 65.8
8 TraesCS4D01G365200 chr5B 86.823 1108 99 15 957 2026 509186553 509187651 0.000000e+00 1194.0
9 TraesCS4D01G365200 chr5B 96.711 152 4 1 805 955 598155395 598155546 4.220000e-63 252.0
10 TraesCS4D01G365200 chr5B 94.595 37 2 0 783 819 598155394 598155358 9.890000e-05 58.4
11 TraesCS4D01G365200 chr2D 95.634 733 7 2 1 732 550657505 550658213 0.000000e+00 1153.0
12 TraesCS4D01G365200 chr2D 93.976 415 22 3 2044 2456 10487888 10488301 2.160000e-175 625.0
13 TraesCS4D01G365200 chr2D 93.976 415 22 3 2044 2456 10505009 10505422 2.160000e-175 625.0
14 TraesCS4D01G365200 chr2D 93.462 413 26 1 2044 2456 640367720 640367309 1.680000e-171 612.0
15 TraesCS4D01G365200 chr2D 96.732 153 4 1 805 956 377319787 377319939 1.170000e-63 254.0
16 TraesCS4D01G365200 chr2D 100.000 34 0 0 783 816 59838737 59838770 2.120000e-06 63.9
17 TraesCS4D01G365200 chr1D 95.212 731 5 4 1 725 420230460 420229754 0.000000e+00 1129.0
18 TraesCS4D01G365200 chr1D 93.902 410 24 1 2044 2453 22477874 22477466 3.620000e-173 617.0
19 TraesCS4D01G365200 chr1D 93.674 411 24 1 2044 2452 58619607 58619197 4.680000e-172 614.0
20 TraesCS4D01G365200 chr1D 97.297 37 1 0 783 819 478277850 478277814 2.120000e-06 63.9
21 TraesCS4D01G365200 chr5A 85.714 1099 96 21 957 2026 535669482 535670548 0.000000e+00 1103.0
22 TraesCS4D01G365200 chr5A 91.317 714 32 9 973 1675 698369724 698370418 0.000000e+00 948.0
23 TraesCS4D01G365200 chr5A 94.904 157 6 2 805 959 563005579 563005735 7.070000e-61 244.0
24 TraesCS4D01G365200 chr5A 94.839 155 7 1 802 955 643557679 643557833 9.150000e-60 241.0
25 TraesCS4D01G365200 chr5A 94.595 37 2 0 783 819 563005578 563005542 9.890000e-05 58.4
26 TraesCS4D01G365200 chr7D 92.339 731 15 7 1 729 37670109 37669418 0.000000e+00 1002.0
27 TraesCS4D01G365200 chr7D 94.417 412 21 2 2043 2454 610486823 610487232 1.290000e-177 632.0
28 TraesCS4D01G365200 chr7D 94.132 409 22 2 2046 2453 133690116 133690523 2.800000e-174 621.0
29 TraesCS4D01G365200 chr7D 96.831 284 5 2 443 726 173803338 173803059 2.980000e-129 472.0
30 TraesCS4D01G365200 chr7D 86.354 469 17 11 1 422 173803780 173803312 3.850000e-128 468.0
31 TraesCS4D01G365200 chr7D 97.297 148 3 1 805 951 371833642 371833495 1.520000e-62 250.0
32 TraesCS4D01G365200 chr7D 100.000 34 0 0 783 816 371833643 371833676 2.120000e-06 63.9
33 TraesCS4D01G365200 chr3B 86.122 771 48 28 1 725 107487857 107488614 0.000000e+00 776.0
34 TraesCS4D01G365200 chr3B 92.414 435 21 7 1 432 370264388 370263963 6.050000e-171 610.0
35 TraesCS4D01G365200 chr6D 98.818 423 4 1 1 422 68697456 68697878 0.000000e+00 752.0
36 TraesCS4D01G365200 chr6D 98.947 285 2 1 443 727 68697852 68698135 2.270000e-140 508.0
37 TraesCS4D01G365200 chr6D 96.732 153 4 1 805 956 157596863 157597015 1.170000e-63 254.0
38 TraesCS4D01G365200 chr6D 97.297 37 1 0 783 819 157596862 157596826 2.120000e-06 63.9
39 TraesCS4D01G365200 chr6B 93.961 414 23 2 2043 2455 49952961 49952549 2.160000e-175 625.0
40 TraesCS4D01G365200 chr6B 95.513 156 6 1 805 959 705865832 705865677 5.470000e-62 248.0
41 TraesCS4D01G365200 chr6B 97.059 34 1 0 783 816 705865833 705865866 9.890000e-05 58.4
42 TraesCS4D01G365200 chr1A 94.146 410 22 2 2044 2453 45858878 45858471 7.770000e-175 623.0
43 TraesCS4D01G365200 chr4B 95.484 155 6 1 805 958 2444536 2444382 1.970000e-61 246.0
44 TraesCS4D01G365200 chr4B 97.059 34 1 0 783 816 2444537 2444570 9.890000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G365200 chr4D 509503323 509505880 2557 False 4724 4724 100.0000 1 2558 1 chr4D.!!$F1 2557
1 TraesCS4D01G365200 chr4D 666524 667254 730 True 1339 1339 99.7260 1 731 1 chr4D.!!$R1 730
2 TraesCS4D01G365200 chr3D 475636072 475636796 724 False 1339 1339 100.0000 1 725 1 chr3D.!!$F1 724
3 TraesCS4D01G365200 chr3D 25517128 25517747 619 False 526 647 96.9310 1 677 2 chr3D.!!$F2 676
4 TraesCS4D01G365200 chr5D 422430667 422431760 1093 False 1284 1284 88.3150 957 2026 1 chr5D.!!$F2 1069
5 TraesCS4D01G365200 chr5B 509186553 509187651 1098 False 1194 1194 86.8230 957 2026 1 chr5B.!!$F1 1069
6 TraesCS4D01G365200 chr2D 550657505 550658213 708 False 1153 1153 95.6340 1 732 1 chr2D.!!$F5 731
7 TraesCS4D01G365200 chr1D 420229754 420230460 706 True 1129 1129 95.2120 1 725 1 chr1D.!!$R3 724
8 TraesCS4D01G365200 chr5A 535669482 535670548 1066 False 1103 1103 85.7140 957 2026 1 chr5A.!!$F1 1069
9 TraesCS4D01G365200 chr5A 698369724 698370418 694 False 948 948 91.3170 973 1675 1 chr5A.!!$F4 702
10 TraesCS4D01G365200 chr7D 37669418 37670109 691 True 1002 1002 92.3390 1 729 1 chr7D.!!$R1 728
11 TraesCS4D01G365200 chr7D 173803059 173803780 721 True 470 472 91.5925 1 726 2 chr7D.!!$R3 725
12 TraesCS4D01G365200 chr3B 107487857 107488614 757 False 776 776 86.1220 1 725 1 chr3B.!!$F1 724
13 TraesCS4D01G365200 chr6D 68697456 68698135 679 False 630 752 98.8825 1 727 2 chr6D.!!$F2 726

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
888 985 0.107654 GCCTGCTCCGACCAAATACT 60.108 55.0 0.0 0.0 0.0 2.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2047 2192 0.035056 CTCGGTCTCCAAAATGCCCT 60.035 55.0 0.0 0.0 0.0 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
732 829 5.796424 GGAACGGAGGGAGTACATATTTA 57.204 43.478 0.00 0.00 0.00 1.40
733 830 6.356186 GGAACGGAGGGAGTACATATTTAT 57.644 41.667 0.00 0.00 0.00 1.40
734 831 6.396450 GGAACGGAGGGAGTACATATTTATC 58.604 44.000 0.00 0.00 0.00 1.75
735 832 5.997384 ACGGAGGGAGTACATATTTATCC 57.003 43.478 0.00 0.00 0.00 2.59
736 833 5.399991 ACGGAGGGAGTACATATTTATCCA 58.600 41.667 0.00 0.00 0.00 3.41
737 834 5.245526 ACGGAGGGAGTACATATTTATCCAC 59.754 44.000 0.00 0.00 0.00 4.02
738 835 5.245301 CGGAGGGAGTACATATTTATCCACA 59.755 44.000 0.00 0.00 0.00 4.17
739 836 6.465084 GGAGGGAGTACATATTTATCCACAC 58.535 44.000 0.00 0.00 0.00 3.82
740 837 6.270231 GGAGGGAGTACATATTTATCCACACT 59.730 42.308 0.00 0.00 0.00 3.55
741 838 7.067496 AGGGAGTACATATTTATCCACACTG 57.933 40.000 0.00 0.00 0.00 3.66
742 839 6.615726 AGGGAGTACATATTTATCCACACTGT 59.384 38.462 0.00 0.00 0.00 3.55
743 840 6.706270 GGGAGTACATATTTATCCACACTGTG 59.294 42.308 6.19 6.19 0.00 3.66
755 852 3.893326 CACACTGTGGTATGATCTCCA 57.107 47.619 13.09 0.00 0.00 3.86
756 853 4.412796 CACACTGTGGTATGATCTCCAT 57.587 45.455 13.09 0.00 39.25 3.41
757 854 4.774124 CACACTGTGGTATGATCTCCATT 58.226 43.478 13.09 0.00 36.71 3.16
758 855 4.813161 CACACTGTGGTATGATCTCCATTC 59.187 45.833 13.09 0.00 36.71 2.67
759 856 4.718774 ACACTGTGGTATGATCTCCATTCT 59.281 41.667 13.09 0.00 36.71 2.40
760 857 5.190528 ACACTGTGGTATGATCTCCATTCTT 59.809 40.000 13.09 0.00 36.71 2.52
761 858 5.757320 CACTGTGGTATGATCTCCATTCTTC 59.243 44.000 0.00 0.00 36.71 2.87
762 859 5.664908 ACTGTGGTATGATCTCCATTCTTCT 59.335 40.000 7.78 0.00 36.71 2.85
763 860 6.166984 TGTGGTATGATCTCCATTCTTCTC 57.833 41.667 7.78 0.00 36.71 2.87
764 861 5.901853 TGTGGTATGATCTCCATTCTTCTCT 59.098 40.000 7.78 0.00 36.71 3.10
765 862 6.385176 TGTGGTATGATCTCCATTCTTCTCTT 59.615 38.462 7.78 0.00 36.71 2.85
766 863 7.092712 TGTGGTATGATCTCCATTCTTCTCTTT 60.093 37.037 7.78 0.00 36.71 2.52
767 864 7.226325 GTGGTATGATCTCCATTCTTCTCTTTG 59.774 40.741 7.78 0.00 36.71 2.77
768 865 7.092712 TGGTATGATCTCCATTCTTCTCTTTGT 60.093 37.037 0.00 0.00 36.71 2.83
769 866 7.440856 GGTATGATCTCCATTCTTCTCTTTGTC 59.559 40.741 0.00 0.00 36.71 3.18
770 867 6.364568 TGATCTCCATTCTTCTCTTTGTCA 57.635 37.500 0.00 0.00 0.00 3.58
771 868 6.772605 TGATCTCCATTCTTCTCTTTGTCAA 58.227 36.000 0.00 0.00 0.00 3.18
772 869 7.226441 TGATCTCCATTCTTCTCTTTGTCAAA 58.774 34.615 0.00 0.00 0.00 2.69
773 870 6.867662 TCTCCATTCTTCTCTTTGTCAAAC 57.132 37.500 0.00 0.00 0.00 2.93
774 871 6.356556 TCTCCATTCTTCTCTTTGTCAAACA 58.643 36.000 0.00 0.00 0.00 2.83
775 872 7.000472 TCTCCATTCTTCTCTTTGTCAAACAT 59.000 34.615 0.00 0.00 0.00 2.71
776 873 7.173907 TCTCCATTCTTCTCTTTGTCAAACATC 59.826 37.037 0.00 0.00 0.00 3.06
777 874 6.207417 TCCATTCTTCTCTTTGTCAAACATCC 59.793 38.462 0.00 0.00 0.00 3.51
778 875 5.673337 TTCTTCTCTTTGTCAAACATCCG 57.327 39.130 0.00 0.00 0.00 4.18
779 876 4.703897 TCTTCTCTTTGTCAAACATCCGT 58.296 39.130 0.00 0.00 0.00 4.69
780 877 4.511454 TCTTCTCTTTGTCAAACATCCGTG 59.489 41.667 0.00 0.00 0.00 4.94
781 878 3.804036 TCTCTTTGTCAAACATCCGTGT 58.196 40.909 0.00 0.00 41.28 4.49
782 879 3.559655 TCTCTTTGTCAAACATCCGTGTG 59.440 43.478 0.00 0.00 38.92 3.82
783 880 2.032799 TCTTTGTCAAACATCCGTGTGC 59.967 45.455 0.00 0.00 38.92 4.57
784 881 1.674359 TTGTCAAACATCCGTGTGCT 58.326 45.000 0.00 0.00 38.92 4.40
785 882 1.225855 TGTCAAACATCCGTGTGCTC 58.774 50.000 0.00 0.00 38.92 4.26
786 883 1.202639 TGTCAAACATCCGTGTGCTCT 60.203 47.619 0.00 0.00 38.92 4.09
787 884 1.461127 GTCAAACATCCGTGTGCTCTC 59.539 52.381 0.00 0.00 38.92 3.20
788 885 0.439985 CAAACATCCGTGTGCTCTCG 59.560 55.000 3.41 3.41 38.92 4.04
789 886 0.317160 AAACATCCGTGTGCTCTCGA 59.683 50.000 11.42 0.00 38.92 4.04
790 887 0.109086 AACATCCGTGTGCTCTCGAG 60.109 55.000 5.93 5.93 38.92 4.04
791 888 1.226802 CATCCGTGTGCTCTCGAGG 60.227 63.158 13.56 4.50 33.21 4.63
792 889 1.679305 ATCCGTGTGCTCTCGAGGT 60.679 57.895 13.56 0.00 33.21 3.85
793 890 1.658686 ATCCGTGTGCTCTCGAGGTC 61.659 60.000 13.56 5.24 33.21 3.85
794 891 2.336478 CCGTGTGCTCTCGAGGTCT 61.336 63.158 13.56 0.00 33.21 3.85
795 892 1.154131 CGTGTGCTCTCGAGGTCTG 60.154 63.158 13.56 2.09 33.21 3.51
796 893 1.857318 CGTGTGCTCTCGAGGTCTGT 61.857 60.000 13.56 0.00 33.21 3.41
797 894 0.109504 GTGTGCTCTCGAGGTCTGTC 60.110 60.000 13.56 0.00 0.00 3.51
798 895 1.244697 TGTGCTCTCGAGGTCTGTCC 61.245 60.000 13.56 0.00 0.00 4.02
799 896 1.074951 TGCTCTCGAGGTCTGTCCA 59.925 57.895 13.56 0.00 39.02 4.02
800 897 0.539669 TGCTCTCGAGGTCTGTCCAA 60.540 55.000 13.56 0.00 39.02 3.53
801 898 0.603569 GCTCTCGAGGTCTGTCCAAA 59.396 55.000 13.56 0.00 39.02 3.28
802 899 1.000955 GCTCTCGAGGTCTGTCCAAAA 59.999 52.381 13.56 0.00 39.02 2.44
803 900 2.548067 GCTCTCGAGGTCTGTCCAAAAA 60.548 50.000 13.56 0.00 39.02 1.94
804 901 3.060602 CTCTCGAGGTCTGTCCAAAAAC 58.939 50.000 13.56 0.00 39.02 2.43
805 902 2.432874 TCTCGAGGTCTGTCCAAAAACA 59.567 45.455 13.56 0.00 39.02 2.83
806 903 2.802816 CTCGAGGTCTGTCCAAAAACAG 59.197 50.000 3.91 0.00 46.54 3.16
807 904 1.264288 CGAGGTCTGTCCAAAAACAGC 59.736 52.381 0.00 0.00 45.12 4.40
808 905 2.576615 GAGGTCTGTCCAAAAACAGCT 58.423 47.619 0.00 0.00 45.12 4.24
809 906 2.291741 GAGGTCTGTCCAAAAACAGCTG 59.708 50.000 13.48 13.48 45.12 4.24
810 907 2.092429 AGGTCTGTCCAAAAACAGCTGA 60.092 45.455 23.35 0.00 45.12 4.26
811 908 2.687935 GGTCTGTCCAAAAACAGCTGAA 59.312 45.455 23.35 0.00 45.12 3.02
812 909 3.319122 GGTCTGTCCAAAAACAGCTGAAT 59.681 43.478 23.35 5.76 45.12 2.57
813 910 4.540824 GTCTGTCCAAAAACAGCTGAATC 58.459 43.478 23.35 2.45 45.12 2.52
814 911 3.569701 TCTGTCCAAAAACAGCTGAATCC 59.430 43.478 23.35 0.08 45.12 3.01
815 912 3.565307 TGTCCAAAAACAGCTGAATCCT 58.435 40.909 23.35 0.00 0.00 3.24
816 913 3.318839 TGTCCAAAAACAGCTGAATCCTG 59.681 43.478 23.35 10.32 36.41 3.86
817 914 3.319122 GTCCAAAAACAGCTGAATCCTGT 59.681 43.478 23.35 0.00 44.92 4.00
818 915 3.318839 TCCAAAAACAGCTGAATCCTGTG 59.681 43.478 23.35 8.42 42.37 3.66
819 916 3.054878 CAAAAACAGCTGAATCCTGTGC 58.945 45.455 23.35 0.00 42.37 4.57
820 917 2.283145 AAACAGCTGAATCCTGTGCT 57.717 45.000 23.35 0.00 42.37 4.40
824 921 2.039818 AGCTGAATCCTGTGCTGATG 57.960 50.000 0.00 0.00 34.19 3.07
825 922 1.281287 AGCTGAATCCTGTGCTGATGT 59.719 47.619 0.00 0.00 34.19 3.06
826 923 2.502947 AGCTGAATCCTGTGCTGATGTA 59.497 45.455 0.00 0.00 34.19 2.29
827 924 3.136077 AGCTGAATCCTGTGCTGATGTAT 59.864 43.478 0.00 0.00 34.19 2.29
828 925 3.250280 GCTGAATCCTGTGCTGATGTATG 59.750 47.826 0.00 0.00 0.00 2.39
829 926 4.449131 CTGAATCCTGTGCTGATGTATGT 58.551 43.478 0.00 0.00 0.00 2.29
830 927 4.847198 TGAATCCTGTGCTGATGTATGTT 58.153 39.130 0.00 0.00 0.00 2.71
831 928 4.637091 TGAATCCTGTGCTGATGTATGTTG 59.363 41.667 0.00 0.00 0.00 3.33
832 929 2.358957 TCCTGTGCTGATGTATGTTGC 58.641 47.619 0.00 0.00 0.00 4.17
833 930 2.026915 TCCTGTGCTGATGTATGTTGCT 60.027 45.455 0.00 0.00 0.00 3.91
834 931 2.096980 CCTGTGCTGATGTATGTTGCTG 59.903 50.000 0.00 0.00 0.00 4.41
835 932 2.086094 TGTGCTGATGTATGTTGCTGG 58.914 47.619 0.00 0.00 0.00 4.85
836 933 1.402968 GTGCTGATGTATGTTGCTGGG 59.597 52.381 0.00 0.00 0.00 4.45
837 934 1.004628 TGCTGATGTATGTTGCTGGGT 59.995 47.619 0.00 0.00 0.00 4.51
838 935 2.094675 GCTGATGTATGTTGCTGGGTT 58.905 47.619 0.00 0.00 0.00 4.11
839 936 2.159338 GCTGATGTATGTTGCTGGGTTG 60.159 50.000 0.00 0.00 0.00 3.77
840 937 1.818060 TGATGTATGTTGCTGGGTTGC 59.182 47.619 0.00 0.00 0.00 4.17
841 938 1.134946 GATGTATGTTGCTGGGTTGCC 59.865 52.381 0.00 0.00 0.00 4.52
842 939 1.240641 TGTATGTTGCTGGGTTGCCG 61.241 55.000 0.00 0.00 0.00 5.69
843 940 1.677300 TATGTTGCTGGGTTGCCGG 60.677 57.895 0.00 0.00 0.00 6.13
849 946 3.673484 CTGGGTTGCCGGCTGTTG 61.673 66.667 29.70 9.10 0.00 3.33
857 954 4.319133 CCGGCTGTTGGCATAGTT 57.681 55.556 0.00 0.00 44.01 2.24
858 955 1.802636 CCGGCTGTTGGCATAGTTG 59.197 57.895 0.00 0.00 44.01 3.16
859 956 0.676466 CCGGCTGTTGGCATAGTTGA 60.676 55.000 0.00 0.00 44.01 3.18
860 957 1.382522 CGGCTGTTGGCATAGTTGAT 58.617 50.000 0.00 0.00 44.01 2.57
861 958 1.064505 CGGCTGTTGGCATAGTTGATG 59.935 52.381 0.00 0.00 44.01 3.07
862 959 2.094675 GGCTGTTGGCATAGTTGATGT 58.905 47.619 0.00 0.00 44.01 3.06
863 960 3.278574 GGCTGTTGGCATAGTTGATGTA 58.721 45.455 0.00 0.00 44.01 2.29
864 961 3.885297 GGCTGTTGGCATAGTTGATGTAT 59.115 43.478 0.00 0.00 44.01 2.29
865 962 5.063204 GGCTGTTGGCATAGTTGATGTATA 58.937 41.667 0.00 0.00 44.01 1.47
866 963 5.180117 GGCTGTTGGCATAGTTGATGTATAG 59.820 44.000 0.00 0.00 44.01 1.31
867 964 5.334414 GCTGTTGGCATAGTTGATGTATAGC 60.334 44.000 0.00 0.00 41.35 2.97
868 965 4.749598 TGTTGGCATAGTTGATGTATAGCG 59.250 41.667 0.00 0.00 37.90 4.26
869 966 3.925379 TGGCATAGTTGATGTATAGCGG 58.075 45.455 0.00 0.00 37.90 5.52
870 967 2.673368 GGCATAGTTGATGTATAGCGGC 59.327 50.000 0.00 0.00 37.90 6.53
871 968 2.673368 GCATAGTTGATGTATAGCGGCC 59.327 50.000 0.00 0.00 37.90 6.13
872 969 3.617531 GCATAGTTGATGTATAGCGGCCT 60.618 47.826 0.00 0.00 37.90 5.19
873 970 2.533266 AGTTGATGTATAGCGGCCTG 57.467 50.000 0.00 0.00 0.00 4.85
874 971 0.868406 GTTGATGTATAGCGGCCTGC 59.132 55.000 11.02 11.02 46.98 4.85
885 982 2.044946 GGCCTGCTCCGACCAAAT 60.045 61.111 0.00 0.00 0.00 2.32
886 983 1.223487 GGCCTGCTCCGACCAAATA 59.777 57.895 0.00 0.00 0.00 1.40
887 984 1.095807 GGCCTGCTCCGACCAAATAC 61.096 60.000 0.00 0.00 0.00 1.89
888 985 0.107654 GCCTGCTCCGACCAAATACT 60.108 55.000 0.00 0.00 0.00 2.12
889 986 1.679032 GCCTGCTCCGACCAAATACTT 60.679 52.381 0.00 0.00 0.00 2.24
890 987 2.009774 CCTGCTCCGACCAAATACTTG 58.990 52.381 0.00 0.00 0.00 3.16
891 988 2.615493 CCTGCTCCGACCAAATACTTGT 60.615 50.000 0.00 0.00 0.00 3.16
892 989 3.369052 CCTGCTCCGACCAAATACTTGTA 60.369 47.826 0.00 0.00 0.00 2.41
893 990 4.250464 CTGCTCCGACCAAATACTTGTAA 58.750 43.478 0.00 0.00 0.00 2.41
894 991 3.998341 TGCTCCGACCAAATACTTGTAAC 59.002 43.478 0.00 0.00 0.00 2.50
895 992 3.998341 GCTCCGACCAAATACTTGTAACA 59.002 43.478 0.00 0.00 0.00 2.41
896 993 4.142966 GCTCCGACCAAATACTTGTAACAC 60.143 45.833 0.00 0.00 0.00 3.32
897 994 4.317488 TCCGACCAAATACTTGTAACACC 58.683 43.478 0.00 0.00 0.00 4.16
898 995 4.040706 TCCGACCAAATACTTGTAACACCT 59.959 41.667 0.00 0.00 0.00 4.00
899 996 4.758165 CCGACCAAATACTTGTAACACCTT 59.242 41.667 0.00 0.00 0.00 3.50
900 997 5.239963 CCGACCAAATACTTGTAACACCTTT 59.760 40.000 0.00 0.00 0.00 3.11
901 998 6.368213 CGACCAAATACTTGTAACACCTTTC 58.632 40.000 0.00 0.00 0.00 2.62
902 999 6.567132 CGACCAAATACTTGTAACACCTTTCC 60.567 42.308 0.00 0.00 0.00 3.13
903 1000 6.370453 ACCAAATACTTGTAACACCTTTCCT 58.630 36.000 0.00 0.00 0.00 3.36
904 1001 6.489022 ACCAAATACTTGTAACACCTTTCCTC 59.511 38.462 0.00 0.00 0.00 3.71
905 1002 6.715264 CCAAATACTTGTAACACCTTTCCTCT 59.285 38.462 0.00 0.00 0.00 3.69
906 1003 7.230712 CCAAATACTTGTAACACCTTTCCTCTT 59.769 37.037 0.00 0.00 0.00 2.85
907 1004 9.280174 CAAATACTTGTAACACCTTTCCTCTTA 57.720 33.333 0.00 0.00 0.00 2.10
926 1023 9.965902 TCCTCTTATAAATGAAAAAGAGAAGCT 57.034 29.630 11.49 0.00 45.01 3.74
928 1025 9.500864 CTCTTATAAATGAAAAAGAGAAGCTGC 57.499 33.333 5.23 0.00 45.01 5.25
929 1026 9.236006 TCTTATAAATGAAAAAGAGAAGCTGCT 57.764 29.630 0.00 0.00 0.00 4.24
930 1027 9.500864 CTTATAAATGAAAAAGAGAAGCTGCTC 57.499 33.333 14.55 14.55 35.11 4.26
931 1028 7.700022 ATAAATGAAAAAGAGAAGCTGCTCT 57.300 32.000 19.42 19.42 46.81 4.09
932 1029 5.373981 AATGAAAAAGAGAAGCTGCTCTG 57.626 39.130 25.56 0.00 44.18 3.35
933 1030 4.077300 TGAAAAAGAGAAGCTGCTCTGA 57.923 40.909 25.56 4.41 44.18 3.27
934 1031 3.812053 TGAAAAAGAGAAGCTGCTCTGAC 59.188 43.478 25.56 15.81 44.18 3.51
935 1032 3.482156 AAAAGAGAAGCTGCTCTGACA 57.518 42.857 25.56 0.00 44.18 3.58
936 1033 2.747396 AAGAGAAGCTGCTCTGACAG 57.253 50.000 25.56 0.00 44.18 3.51
944 1041 3.938112 GCTCTGACAGCGTTTCGT 58.062 55.556 0.00 0.00 38.76 3.85
945 1042 1.775962 GCTCTGACAGCGTTTCGTC 59.224 57.895 0.00 0.00 38.76 4.20
946 1043 0.939577 GCTCTGACAGCGTTTCGTCA 60.940 55.000 0.00 0.00 38.76 4.35
947 1044 1.487482 CTCTGACAGCGTTTCGTCAA 58.513 50.000 0.00 0.00 41.39 3.18
948 1045 1.858458 CTCTGACAGCGTTTCGTCAAA 59.142 47.619 0.00 0.00 41.39 2.69
949 1046 2.272678 TCTGACAGCGTTTCGTCAAAA 58.727 42.857 0.00 0.00 41.39 2.44
950 1047 2.673862 TCTGACAGCGTTTCGTCAAAAA 59.326 40.909 0.00 0.00 41.39 1.94
1086 1194 2.047560 ACTCGGCCGGTAACAAGC 60.048 61.111 27.83 0.00 34.83 4.01
1087 1195 2.047655 CTCGGCCGGTAACAAGCA 60.048 61.111 27.83 0.26 37.24 3.91
1088 1196 1.669760 CTCGGCCGGTAACAAGCAA 60.670 57.895 27.83 0.00 37.24 3.91
1089 1197 1.003112 TCGGCCGGTAACAAGCAAT 60.003 52.632 27.83 0.00 37.24 3.56
1159 1267 1.961394 GATCATTGCACCATCATGGCT 59.039 47.619 2.52 0.00 42.67 4.75
1181 1289 0.253044 TGCAGGGTAATGGAGTGAGC 59.747 55.000 0.00 0.00 0.00 4.26
1423 1532 6.710744 ACCAGAACATCTTCGTGTTAGAATTT 59.289 34.615 0.00 0.00 42.08 1.82
1517 1627 8.677870 AGAAGTTTAGGCTATATCAGATCCAT 57.322 34.615 0.00 0.00 0.00 3.41
1621 1755 8.963130 TGTGTTTGAAACATTTCGAATGATTAC 58.037 29.630 14.40 0.00 44.35 1.89
1633 1767 3.306973 CGAATGATTACGAAAGCTCAGCA 59.693 43.478 0.00 0.00 0.00 4.41
1691 1825 1.080705 GTGCGCGACTAGGAACTGT 60.081 57.895 12.10 0.00 41.52 3.55
1692 1826 1.071567 GTGCGCGACTAGGAACTGTC 61.072 60.000 12.10 0.00 41.52 3.51
1703 1837 4.588951 ACTAGGAACTGTCTCATGTTCACA 59.411 41.667 7.91 0.00 42.91 3.58
1714 1848 8.260270 TGTCTCATGTTCACAGAATTATCAAG 57.740 34.615 0.00 0.00 0.00 3.02
1735 1869 2.923605 GCATGTGGCAAATATCGCATCC 60.924 50.000 0.00 0.00 43.97 3.51
1745 1880 1.674359 TATCGCATCCGGCATGTTTT 58.326 45.000 13.24 4.02 45.17 2.43
1746 1881 1.674359 ATCGCATCCGGCATGTTTTA 58.326 45.000 13.24 1.23 45.17 1.52
1747 1882 1.674359 TCGCATCCGGCATGTTTTAT 58.326 45.000 13.24 0.00 45.17 1.40
1748 1883 2.839975 TCGCATCCGGCATGTTTTATA 58.160 42.857 13.24 0.00 45.17 0.98
1749 1884 3.407698 TCGCATCCGGCATGTTTTATAT 58.592 40.909 13.24 0.00 45.17 0.86
1750 1885 4.570930 TCGCATCCGGCATGTTTTATATA 58.429 39.130 13.24 0.00 45.17 0.86
1758 1893 6.093909 TCCGGCATGTTTTATATATCTGCATG 59.906 38.462 0.00 11.75 36.35 4.06
1763 1898 9.121517 GCATGTTTTATATATCTGCATGTTCAC 57.878 33.333 14.96 2.83 35.87 3.18
1766 1901 9.612066 TGTTTTATATATCTGCATGTTCACAGA 57.388 29.630 3.63 3.63 46.34 3.41
1775 1910 4.413969 TGCATGTTCACAGAATTTATGCG 58.586 39.130 15.21 0.00 41.55 4.73
1776 1911 4.082841 TGCATGTTCACAGAATTTATGCGT 60.083 37.500 15.21 0.00 41.55 5.24
1777 1912 4.263677 GCATGTTCACAGAATTTATGCGTG 59.736 41.667 0.00 0.00 31.52 5.34
1778 1913 5.630061 CATGTTCACAGAATTTATGCGTGA 58.370 37.500 0.00 0.00 34.92 4.35
1780 1915 5.868257 TGTTCACAGAATTTATGCGTGATC 58.132 37.500 0.00 0.00 36.55 2.92
1781 1916 4.777140 TCACAGAATTTATGCGTGATCG 57.223 40.909 0.00 0.00 40.37 3.69
1812 1947 0.035458 GTCTCACCTGTGGAACCCTG 59.965 60.000 0.00 0.00 34.36 4.45
1821 1956 1.304381 TGGAACCCTGCATTGAGGC 60.304 57.895 0.00 0.00 0.00 4.70
1865 2000 0.662619 TTGCTGGTCTTGTTTGAGCG 59.337 50.000 0.00 0.00 37.28 5.03
1866 2001 1.081840 GCTGGTCTTGTTTGAGCGC 60.082 57.895 0.00 0.00 37.28 5.92
1871 2006 2.127118 CTTGTTTGAGCGCTGCCG 60.127 61.111 18.48 0.00 37.57 5.69
1873 2008 2.770587 CTTGTTTGAGCGCTGCCGTC 62.771 60.000 18.48 0.00 36.67 4.79
1924 2068 7.944729 AATTTCTCCAGTATGTTGTGCTATT 57.055 32.000 0.00 0.00 0.00 1.73
1933 2077 7.962918 CCAGTATGTTGTGCTATTTGTCTTAAC 59.037 37.037 0.00 0.00 0.00 2.01
1977 2121 0.834612 ATAATTCCCGCCAACCTCGA 59.165 50.000 0.00 0.00 0.00 4.04
1999 2143 5.360144 CGAAGGTCTCAGTTCTATTAAGGGA 59.640 44.000 0.00 0.00 0.00 4.20
2026 2171 9.657419 ATCACGAGTATATTTGATGCAATATCA 57.343 29.630 0.00 0.00 0.00 2.15
2027 2172 9.487790 TCACGAGTATATTTGATGCAATATCAA 57.512 29.630 0.00 0.00 36.37 2.57
2040 2185 9.416284 TGATGCAATATCAATATATCATTGCCT 57.584 29.630 20.30 15.15 46.88 4.75
2043 2188 9.863845 TGCAATATCAATATATCATTGCCTTTG 57.136 29.630 20.30 9.37 46.88 2.77
2049 2194 8.853077 TCAATATATCATTGCCTTTGAGTAGG 57.147 34.615 0.00 0.00 38.40 3.18
2050 2195 7.884877 TCAATATATCATTGCCTTTGAGTAGGG 59.115 37.037 0.00 0.00 35.74 3.53
2051 2196 2.128771 TCATTGCCTTTGAGTAGGGC 57.871 50.000 0.00 0.00 45.45 5.19
2057 2202 3.236632 GCCTTTGAGTAGGGCATTTTG 57.763 47.619 0.00 0.00 44.69 2.44
2058 2203 2.094026 GCCTTTGAGTAGGGCATTTTGG 60.094 50.000 0.00 0.00 44.69 3.28
2059 2204 3.430453 CCTTTGAGTAGGGCATTTTGGA 58.570 45.455 0.00 0.00 0.00 3.53
2060 2205 3.445096 CCTTTGAGTAGGGCATTTTGGAG 59.555 47.826 0.00 0.00 0.00 3.86
2061 2206 4.335416 CTTTGAGTAGGGCATTTTGGAGA 58.665 43.478 0.00 0.00 0.00 3.71
2062 2207 3.350219 TGAGTAGGGCATTTTGGAGAC 57.650 47.619 0.00 0.00 0.00 3.36
2063 2208 2.026262 TGAGTAGGGCATTTTGGAGACC 60.026 50.000 0.00 0.00 0.00 3.85
2064 2209 1.065418 AGTAGGGCATTTTGGAGACCG 60.065 52.381 0.00 0.00 0.00 4.79
2065 2210 1.065709 GTAGGGCATTTTGGAGACCGA 60.066 52.381 0.00 0.00 0.00 4.69
2066 2211 0.035056 AGGGCATTTTGGAGACCGAG 60.035 55.000 0.00 0.00 0.00 4.63
2067 2212 1.657751 GGGCATTTTGGAGACCGAGC 61.658 60.000 0.00 0.00 0.00 5.03
2068 2213 0.678048 GGCATTTTGGAGACCGAGCT 60.678 55.000 0.00 0.00 0.00 4.09
2069 2214 0.729690 GCATTTTGGAGACCGAGCTC 59.270 55.000 2.73 2.73 0.00 4.09
2075 2220 3.941081 GAGACCGAGCTCCATGGA 58.059 61.111 15.27 15.27 0.00 3.41
2076 2221 1.739049 GAGACCGAGCTCCATGGAG 59.261 63.158 33.73 33.73 44.56 3.86
2088 2233 4.660789 CTCCATGGAGCCCTTTATTTTG 57.339 45.455 28.45 1.40 35.31 2.44
2089 2234 4.280819 CTCCATGGAGCCCTTTATTTTGA 58.719 43.478 28.45 0.00 35.31 2.69
2090 2235 4.682563 TCCATGGAGCCCTTTATTTTGAA 58.317 39.130 11.44 0.00 0.00 2.69
2091 2236 5.090139 TCCATGGAGCCCTTTATTTTGAAA 58.910 37.500 11.44 0.00 0.00 2.69
2092 2237 5.545723 TCCATGGAGCCCTTTATTTTGAAAA 59.454 36.000 11.44 0.00 0.00 2.29
2093 2238 6.043706 TCCATGGAGCCCTTTATTTTGAAAAA 59.956 34.615 11.44 0.00 0.00 1.94
2094 2239 6.885918 CCATGGAGCCCTTTATTTTGAAAAAT 59.114 34.615 5.56 6.29 41.24 1.82
2095 2240 7.394077 CCATGGAGCCCTTTATTTTGAAAAATT 59.606 33.333 5.56 0.00 39.24 1.82
2096 2241 7.977789 TGGAGCCCTTTATTTTGAAAAATTC 57.022 32.000 6.34 0.00 39.24 2.17
2097 2242 7.512992 TGGAGCCCTTTATTTTGAAAAATTCA 58.487 30.769 6.34 0.00 39.24 2.57
2150 2295 8.741101 TTCTGAAAAACATTACACATGTATGC 57.259 30.769 0.00 0.00 0.00 3.14
2151 2296 7.880105 TCTGAAAAACATTACACATGTATGCA 58.120 30.769 0.00 0.00 0.00 3.96
2152 2297 8.355913 TCTGAAAAACATTACACATGTATGCAA 58.644 29.630 0.00 0.00 0.00 4.08
2153 2298 8.518151 TGAAAAACATTACACATGTATGCAAG 57.482 30.769 0.00 0.00 0.00 4.01
2154 2299 7.598118 TGAAAAACATTACACATGTATGCAAGG 59.402 33.333 0.00 0.00 0.00 3.61
2155 2300 6.832520 AAACATTACACATGTATGCAAGGA 57.167 33.333 0.00 0.00 0.00 3.36
2156 2301 7.408756 AAACATTACACATGTATGCAAGGAT 57.591 32.000 0.00 0.00 0.00 3.24
2157 2302 6.381481 ACATTACACATGTATGCAAGGATG 57.619 37.500 0.00 0.00 0.00 3.51
2158 2303 5.887598 ACATTACACATGTATGCAAGGATGT 59.112 36.000 0.00 0.00 0.00 3.06
2159 2304 7.053498 ACATTACACATGTATGCAAGGATGTA 58.947 34.615 0.00 2.28 0.00 2.29
2160 2305 7.555914 ACATTACACATGTATGCAAGGATGTAA 59.444 33.333 0.00 11.55 36.16 2.41
2161 2306 7.929941 TTACACATGTATGCAAGGATGTAAA 57.070 32.000 0.00 3.99 30.53 2.01
2162 2307 6.441093 ACACATGTATGCAAGGATGTAAAG 57.559 37.500 0.00 0.66 0.00 1.85
2163 2308 5.945784 ACACATGTATGCAAGGATGTAAAGT 59.054 36.000 0.00 1.15 0.00 2.66
2164 2309 6.127925 ACACATGTATGCAAGGATGTAAAGTG 60.128 38.462 0.00 0.00 0.00 3.16
2165 2310 5.945784 ACATGTATGCAAGGATGTAAAGTGT 59.054 36.000 0.00 0.00 0.00 3.55
2166 2311 7.065683 CACATGTATGCAAGGATGTAAAGTGTA 59.934 37.037 0.00 0.00 0.00 2.90
2167 2312 7.775093 ACATGTATGCAAGGATGTAAAGTGTAT 59.225 33.333 0.00 0.00 0.00 2.29
2168 2313 7.552458 TGTATGCAAGGATGTAAAGTGTATG 57.448 36.000 0.00 0.00 0.00 2.39
2169 2314 7.109501 TGTATGCAAGGATGTAAAGTGTATGT 58.890 34.615 0.00 0.00 0.00 2.29
2170 2315 5.878332 TGCAAGGATGTAAAGTGTATGTG 57.122 39.130 0.00 0.00 0.00 3.21
2171 2316 5.312895 TGCAAGGATGTAAAGTGTATGTGT 58.687 37.500 0.00 0.00 0.00 3.72
2172 2317 5.181056 TGCAAGGATGTAAAGTGTATGTGTG 59.819 40.000 0.00 0.00 0.00 3.82
2173 2318 5.411361 GCAAGGATGTAAAGTGTATGTGTGA 59.589 40.000 0.00 0.00 0.00 3.58
2174 2319 6.072728 GCAAGGATGTAAAGTGTATGTGTGAA 60.073 38.462 0.00 0.00 0.00 3.18
2175 2320 7.521423 GCAAGGATGTAAAGTGTATGTGTGAAA 60.521 37.037 0.00 0.00 0.00 2.69
2176 2321 8.349245 CAAGGATGTAAAGTGTATGTGTGAAAA 58.651 33.333 0.00 0.00 0.00 2.29
2177 2322 8.458573 AGGATGTAAAGTGTATGTGTGAAAAA 57.541 30.769 0.00 0.00 0.00 1.94
2178 2323 9.077885 AGGATGTAAAGTGTATGTGTGAAAAAT 57.922 29.630 0.00 0.00 0.00 1.82
2179 2324 9.691362 GGATGTAAAGTGTATGTGTGAAAAATT 57.309 29.630 0.00 0.00 0.00 1.82
2184 2329 8.647143 AAAGTGTATGTGTGAAAAATTTCAGG 57.353 30.769 8.76 0.00 46.80 3.86
2185 2330 7.581213 AGTGTATGTGTGAAAAATTTCAGGA 57.419 32.000 8.76 0.00 46.80 3.86
2186 2331 8.181904 AGTGTATGTGTGAAAAATTTCAGGAT 57.818 30.769 8.76 4.68 46.80 3.24
2187 2332 8.084073 AGTGTATGTGTGAAAAATTTCAGGATG 58.916 33.333 8.76 0.00 46.80 3.51
2188 2333 8.081633 GTGTATGTGTGAAAAATTTCAGGATGA 58.918 33.333 8.76 0.00 46.80 2.92
2203 2348 6.455360 TCAGGATGAAATACCTTGAATTGC 57.545 37.500 0.00 0.00 45.97 3.56
2204 2349 5.066375 TCAGGATGAAATACCTTGAATTGCG 59.934 40.000 0.00 0.00 45.97 4.85
2205 2350 5.066375 CAGGATGAAATACCTTGAATTGCGA 59.934 40.000 0.00 0.00 39.69 5.10
2206 2351 5.297776 AGGATGAAATACCTTGAATTGCGAG 59.702 40.000 0.00 0.00 31.95 5.03
2207 2352 4.355543 TGAAATACCTTGAATTGCGAGC 57.644 40.909 0.00 0.00 0.00 5.03
2208 2353 4.009675 TGAAATACCTTGAATTGCGAGCT 58.990 39.130 0.00 0.00 0.00 4.09
2209 2354 4.142622 TGAAATACCTTGAATTGCGAGCTG 60.143 41.667 0.00 0.00 0.00 4.24
2210 2355 1.086696 TACCTTGAATTGCGAGCTGC 58.913 50.000 0.00 0.00 46.70 5.25
2266 2411 9.665264 GATAAACAGTACATATGCTAAAAAGCC 57.335 33.333 1.58 0.00 0.00 4.35
2267 2412 7.703058 AAACAGTACATATGCTAAAAAGCCT 57.297 32.000 1.58 0.00 0.00 4.58
2268 2413 7.703058 AACAGTACATATGCTAAAAAGCCTT 57.297 32.000 1.58 0.00 0.00 4.35
2269 2414 8.801882 AACAGTACATATGCTAAAAAGCCTTA 57.198 30.769 1.58 0.00 0.00 2.69
2270 2415 8.438676 ACAGTACATATGCTAAAAAGCCTTAG 57.561 34.615 1.58 0.00 32.88 2.18
2271 2416 8.265055 ACAGTACATATGCTAAAAAGCCTTAGA 58.735 33.333 1.58 0.00 31.59 2.10
2272 2417 9.277783 CAGTACATATGCTAAAAAGCCTTAGAT 57.722 33.333 1.58 0.00 31.59 1.98
2273 2418 9.853177 AGTACATATGCTAAAAAGCCTTAGATT 57.147 29.630 1.58 0.00 31.59 2.40
2276 2421 8.971073 ACATATGCTAAAAAGCCTTAGATTTGT 58.029 29.630 1.58 0.00 30.45 2.83
2277 2422 9.455847 CATATGCTAAAAAGCCTTAGATTTGTC 57.544 33.333 0.00 0.00 30.45 3.18
2278 2423 7.709149 ATGCTAAAAAGCCTTAGATTTGTCT 57.291 32.000 2.79 0.00 30.45 3.41
2279 2424 7.524717 TGCTAAAAAGCCTTAGATTTGTCTT 57.475 32.000 2.79 0.00 30.45 3.01
2280 2425 7.951591 TGCTAAAAAGCCTTAGATTTGTCTTT 58.048 30.769 2.79 0.00 30.45 2.52
2281 2426 8.421002 TGCTAAAAAGCCTTAGATTTGTCTTTT 58.579 29.630 2.79 0.00 35.89 2.27
2282 2427 9.261180 GCTAAAAAGCCTTAGATTTGTCTTTTT 57.739 29.630 12.91 12.91 42.61 1.94
2310 2455 7.846107 GTGTAGCTCACATGTTATTGTATTTCG 59.154 37.037 0.00 0.00 45.51 3.46
2311 2456 7.762159 TGTAGCTCACATGTTATTGTATTTCGA 59.238 33.333 0.00 0.00 30.04 3.71
2312 2457 7.005062 AGCTCACATGTTATTGTATTTCGAC 57.995 36.000 0.00 0.00 0.00 4.20
2313 2458 6.037172 AGCTCACATGTTATTGTATTTCGACC 59.963 38.462 0.00 0.00 0.00 4.79
2314 2459 6.037172 GCTCACATGTTATTGTATTTCGACCT 59.963 38.462 0.00 0.00 0.00 3.85
2315 2460 7.223971 GCTCACATGTTATTGTATTTCGACCTA 59.776 37.037 0.00 0.00 0.00 3.08
2316 2461 9.093970 CTCACATGTTATTGTATTTCGACCTAA 57.906 33.333 0.00 0.00 0.00 2.69
2317 2462 9.438228 TCACATGTTATTGTATTTCGACCTAAA 57.562 29.630 0.00 0.00 0.00 1.85
2326 2471 7.861176 TGTATTTCGACCTAAAAATTTGCAC 57.139 32.000 0.00 0.00 0.00 4.57
2327 2472 7.426410 TGTATTTCGACCTAAAAATTTGCACA 58.574 30.769 0.00 0.00 0.00 4.57
2328 2473 6.763303 ATTTCGACCTAAAAATTTGCACAC 57.237 33.333 0.00 0.00 0.00 3.82
2329 2474 4.902443 TCGACCTAAAAATTTGCACACA 57.098 36.364 0.00 0.00 0.00 3.72
2330 2475 5.446143 TCGACCTAAAAATTTGCACACAT 57.554 34.783 0.00 0.00 0.00 3.21
2331 2476 5.218885 TCGACCTAAAAATTTGCACACATG 58.781 37.500 0.00 0.00 0.00 3.21
2332 2477 4.981674 CGACCTAAAAATTTGCACACATGT 59.018 37.500 0.00 0.00 0.00 3.21
2333 2478 6.017026 TCGACCTAAAAATTTGCACACATGTA 60.017 34.615 0.00 0.00 0.00 2.29
2334 2479 6.806249 CGACCTAAAAATTTGCACACATGTAT 59.194 34.615 0.00 0.00 0.00 2.29
2335 2480 7.965655 CGACCTAAAAATTTGCACACATGTATA 59.034 33.333 0.00 0.00 0.00 1.47
2336 2481 9.801873 GACCTAAAAATTTGCACACATGTATAT 57.198 29.630 0.00 0.00 0.00 0.86
2348 2493 9.586435 TGCACACATGTATATTATGTATCTAGC 57.414 33.333 0.00 6.45 36.67 3.42
2349 2494 9.809096 GCACACATGTATATTATGTATCTAGCT 57.191 33.333 0.00 0.00 36.67 3.32
2422 2567 6.096673 TGAAGTTTTCAAATAAAGGCCTCC 57.903 37.500 5.23 0.00 36.59 4.30
2423 2568 5.600484 TGAAGTTTTCAAATAAAGGCCTCCA 59.400 36.000 5.23 0.00 36.59 3.86
2424 2569 6.269769 TGAAGTTTTCAAATAAAGGCCTCCAT 59.730 34.615 5.23 0.00 36.59 3.41
2425 2570 6.041423 AGTTTTCAAATAAAGGCCTCCATG 57.959 37.500 5.23 1.29 0.00 3.66
2426 2571 5.046376 AGTTTTCAAATAAAGGCCTCCATGG 60.046 40.000 5.23 4.97 39.35 3.66
2427 2572 4.329638 TTCAAATAAAGGCCTCCATGGA 57.670 40.909 15.27 15.27 38.35 3.41
2428 2573 3.902218 TCAAATAAAGGCCTCCATGGAG 58.098 45.455 31.69 31.69 41.63 3.86
2429 2574 2.363359 CAAATAAAGGCCTCCATGGAGC 59.637 50.000 32.97 26.44 40.69 4.70
2430 2575 1.527457 ATAAAGGCCTCCATGGAGCT 58.473 50.000 32.97 23.24 40.69 4.09
2431 2576 0.839946 TAAAGGCCTCCATGGAGCTC 59.160 55.000 32.97 25.21 40.69 4.09
2432 2577 2.262774 AAAGGCCTCCATGGAGCTCG 62.263 60.000 32.97 21.57 40.69 5.03
2433 2578 4.247380 GGCCTCCATGGAGCTCGG 62.247 72.222 32.97 22.55 40.69 4.63
2434 2579 3.474570 GCCTCCATGGAGCTCGGT 61.475 66.667 32.97 0.00 40.69 4.69
2435 2580 2.818132 CCTCCATGGAGCTCGGTC 59.182 66.667 32.97 0.00 40.69 4.79
2436 2581 1.760086 CCTCCATGGAGCTCGGTCT 60.760 63.158 32.97 0.00 40.69 3.85
2437 2582 1.739049 CTCCATGGAGCTCGGTCTC 59.261 63.158 28.45 0.00 35.31 3.36
2448 2593 3.981308 CGGTCTCCGTTTGGCATT 58.019 55.556 0.00 0.00 42.73 3.56
2449 2594 2.253513 CGGTCTCCGTTTGGCATTT 58.746 52.632 0.00 0.00 42.73 2.32
2450 2595 0.596082 CGGTCTCCGTTTGGCATTTT 59.404 50.000 0.00 0.00 42.73 1.82
2451 2596 1.401018 CGGTCTCCGTTTGGCATTTTC 60.401 52.381 0.00 0.00 42.73 2.29
2452 2597 1.401018 GGTCTCCGTTTGGCATTTTCG 60.401 52.381 0.00 0.00 34.14 3.46
2453 2598 1.533731 GTCTCCGTTTGGCATTTTCGA 59.466 47.619 0.00 0.00 34.14 3.71
2454 2599 2.161609 GTCTCCGTTTGGCATTTTCGAT 59.838 45.455 0.00 0.00 34.14 3.59
2455 2600 2.817258 TCTCCGTTTGGCATTTTCGATT 59.183 40.909 0.00 0.00 34.14 3.34
2456 2601 2.916716 CTCCGTTTGGCATTTTCGATTG 59.083 45.455 0.00 0.00 34.14 2.67
2457 2602 1.389784 CCGTTTGGCATTTTCGATTGC 59.610 47.619 6.90 6.90 38.14 3.56
2465 2610 4.840401 GCATTTTCGATTGCCTTTTACC 57.160 40.909 4.63 0.00 32.66 2.85
2466 2611 4.494484 GCATTTTCGATTGCCTTTTACCT 58.506 39.130 4.63 0.00 32.66 3.08
2467 2612 5.646606 GCATTTTCGATTGCCTTTTACCTA 58.353 37.500 4.63 0.00 32.66 3.08
2468 2613 6.273071 GCATTTTCGATTGCCTTTTACCTAT 58.727 36.000 4.63 0.00 32.66 2.57
2469 2614 7.422399 GCATTTTCGATTGCCTTTTACCTATA 58.578 34.615 4.63 0.00 32.66 1.31
2470 2615 7.378728 GCATTTTCGATTGCCTTTTACCTATAC 59.621 37.037 4.63 0.00 32.66 1.47
2471 2616 7.925043 TTTTCGATTGCCTTTTACCTATACA 57.075 32.000 0.00 0.00 0.00 2.29
2472 2617 6.913873 TTCGATTGCCTTTTACCTATACAC 57.086 37.500 0.00 0.00 0.00 2.90
2473 2618 5.979993 TCGATTGCCTTTTACCTATACACA 58.020 37.500 0.00 0.00 0.00 3.72
2474 2619 6.588204 TCGATTGCCTTTTACCTATACACAT 58.412 36.000 0.00 0.00 0.00 3.21
2475 2620 7.051623 TCGATTGCCTTTTACCTATACACATT 58.948 34.615 0.00 0.00 0.00 2.71
2476 2621 8.205512 TCGATTGCCTTTTACCTATACACATTA 58.794 33.333 0.00 0.00 0.00 1.90
2477 2622 8.999431 CGATTGCCTTTTACCTATACACATTAT 58.001 33.333 0.00 0.00 0.00 1.28
2479 2624 7.504924 TGCCTTTTACCTATACACATTATGC 57.495 36.000 0.00 0.00 0.00 3.14
2480 2625 7.287061 TGCCTTTTACCTATACACATTATGCT 58.713 34.615 0.00 0.00 0.00 3.79
2481 2626 7.777910 TGCCTTTTACCTATACACATTATGCTT 59.222 33.333 0.00 0.00 0.00 3.91
2482 2627 8.630037 GCCTTTTACCTATACACATTATGCTTT 58.370 33.333 0.00 0.00 0.00 3.51
2489 2634 9.988815 ACCTATACACATTATGCTTTAGAAGAG 57.011 33.333 0.00 0.00 0.00 2.85
2490 2635 8.930760 CCTATACACATTATGCTTTAGAAGAGC 58.069 37.037 0.00 0.00 40.53 4.09
2491 2636 9.703892 CTATACACATTATGCTTTAGAAGAGCT 57.296 33.333 0.00 0.00 40.75 4.09
2492 2637 8.970859 ATACACATTATGCTTTAGAAGAGCTT 57.029 30.769 0.00 0.00 40.75 3.74
2494 2639 8.792830 ACACATTATGCTTTAGAAGAGCTTAA 57.207 30.769 6.83 6.83 41.19 1.85
2495 2640 8.669243 ACACATTATGCTTTAGAAGAGCTTAAC 58.331 33.333 6.60 0.00 40.37 2.01
2496 2641 8.668353 CACATTATGCTTTAGAAGAGCTTAACA 58.332 33.333 6.60 0.00 40.37 2.41
2497 2642 9.401058 ACATTATGCTTTAGAAGAGCTTAACAT 57.599 29.630 6.60 0.00 40.37 2.71
2498 2643 9.661187 CATTATGCTTTAGAAGAGCTTAACATG 57.339 33.333 6.60 0.00 40.37 3.21
2499 2644 6.690194 ATGCTTTAGAAGAGCTTAACATGG 57.310 37.500 0.00 0.00 40.75 3.66
2500 2645 5.804639 TGCTTTAGAAGAGCTTAACATGGA 58.195 37.500 0.00 0.00 40.75 3.41
2501 2646 6.418101 TGCTTTAGAAGAGCTTAACATGGAT 58.582 36.000 0.00 0.00 40.75 3.41
2502 2647 7.564793 TGCTTTAGAAGAGCTTAACATGGATA 58.435 34.615 0.00 0.00 40.75 2.59
2503 2648 8.213679 TGCTTTAGAAGAGCTTAACATGGATAT 58.786 33.333 0.00 0.00 40.75 1.63
2504 2649 8.502387 GCTTTAGAAGAGCTTAACATGGATATG 58.498 37.037 0.00 0.00 37.45 1.78
2509 2654 8.099537 AGAAGAGCTTAACATGGATATGTATGG 58.900 37.037 0.00 0.00 46.54 2.74
2510 2655 7.321717 AGAGCTTAACATGGATATGTATGGT 57.678 36.000 0.00 0.00 46.54 3.55
2511 2656 7.390027 AGAGCTTAACATGGATATGTATGGTC 58.610 38.462 0.00 0.00 46.54 4.02
2512 2657 7.016563 AGAGCTTAACATGGATATGTATGGTCA 59.983 37.037 0.00 0.00 46.54 4.02
2513 2658 7.693132 AGCTTAACATGGATATGTATGGTCAT 58.307 34.615 0.00 0.00 46.54 3.06
2514 2659 8.166061 AGCTTAACATGGATATGTATGGTCATT 58.834 33.333 0.00 0.00 46.54 2.57
2515 2660 8.796475 GCTTAACATGGATATGTATGGTCATTT 58.204 33.333 0.00 0.00 46.54 2.32
2518 2663 8.627208 AACATGGATATGTATGGTCATTTCTC 57.373 34.615 0.00 0.00 46.54 2.87
2519 2664 7.748677 ACATGGATATGTATGGTCATTTCTCA 58.251 34.615 0.00 0.00 45.45 3.27
2520 2665 8.219868 ACATGGATATGTATGGTCATTTCTCAA 58.780 33.333 0.00 0.00 45.45 3.02
2521 2666 9.239551 CATGGATATGTATGGTCATTTCTCAAT 57.760 33.333 0.00 0.00 0.00 2.57
2529 2674 9.739276 TGTATGGTCATTTCTCAATAAGTTTCT 57.261 29.630 0.00 0.00 0.00 2.52
2532 2677 8.924511 TGGTCATTTCTCAATAAGTTTCTCTT 57.075 30.769 0.00 0.00 39.89 2.85
2533 2678 8.786898 TGGTCATTTCTCAATAAGTTTCTCTTG 58.213 33.333 0.00 0.00 37.56 3.02
2534 2679 8.239998 GGTCATTTCTCAATAAGTTTCTCTTGG 58.760 37.037 0.00 0.00 37.56 3.61
2535 2680 8.787852 GTCATTTCTCAATAAGTTTCTCTTGGT 58.212 33.333 0.00 0.00 37.56 3.67
2536 2681 9.003658 TCATTTCTCAATAAGTTTCTCTTGGTC 57.996 33.333 0.00 0.00 37.56 4.02
2537 2682 7.745620 TTTCTCAATAAGTTTCTCTTGGTCC 57.254 36.000 0.00 0.00 37.56 4.46
2538 2683 5.479306 TCTCAATAAGTTTCTCTTGGTCCG 58.521 41.667 0.00 0.00 37.56 4.79
2539 2684 5.011738 TCTCAATAAGTTTCTCTTGGTCCGT 59.988 40.000 0.00 0.00 37.56 4.69
2540 2685 4.994852 TCAATAAGTTTCTCTTGGTCCGTG 59.005 41.667 0.00 0.00 37.56 4.94
2541 2686 1.594331 AAGTTTCTCTTGGTCCGTGC 58.406 50.000 0.00 0.00 34.77 5.34
2542 2687 0.468226 AGTTTCTCTTGGTCCGTGCA 59.532 50.000 0.00 0.00 0.00 4.57
2543 2688 1.072331 AGTTTCTCTTGGTCCGTGCAT 59.928 47.619 0.00 0.00 0.00 3.96
2544 2689 2.301870 AGTTTCTCTTGGTCCGTGCATA 59.698 45.455 0.00 0.00 0.00 3.14
2545 2690 3.071479 GTTTCTCTTGGTCCGTGCATAA 58.929 45.455 0.00 0.00 0.00 1.90
2546 2691 3.627395 TTCTCTTGGTCCGTGCATAAT 57.373 42.857 0.00 0.00 0.00 1.28
2547 2692 3.627395 TCTCTTGGTCCGTGCATAATT 57.373 42.857 0.00 0.00 0.00 1.40
2548 2693 4.746535 TCTCTTGGTCCGTGCATAATTA 57.253 40.909 0.00 0.00 0.00 1.40
2549 2694 5.092554 TCTCTTGGTCCGTGCATAATTAA 57.907 39.130 0.00 0.00 0.00 1.40
2550 2695 5.680619 TCTCTTGGTCCGTGCATAATTAAT 58.319 37.500 0.00 0.00 0.00 1.40
2551 2696 5.758296 TCTCTTGGTCCGTGCATAATTAATC 59.242 40.000 0.00 0.00 0.00 1.75
2552 2697 5.680619 TCTTGGTCCGTGCATAATTAATCT 58.319 37.500 0.00 0.00 0.00 2.40
2553 2698 6.119536 TCTTGGTCCGTGCATAATTAATCTT 58.880 36.000 0.00 0.00 0.00 2.40
2554 2699 6.601613 TCTTGGTCCGTGCATAATTAATCTTT 59.398 34.615 0.00 0.00 0.00 2.52
2555 2700 6.767524 TGGTCCGTGCATAATTAATCTTTT 57.232 33.333 0.00 0.00 0.00 2.27
2556 2701 7.867305 TGGTCCGTGCATAATTAATCTTTTA 57.133 32.000 0.00 0.00 0.00 1.52
2557 2702 8.458573 TGGTCCGTGCATAATTAATCTTTTAT 57.541 30.769 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
732 829 7.832963 AATGGAGATCATACCACAGTGTGGAT 61.833 42.308 42.06 27.46 44.94 3.41
733 830 6.579192 AATGGAGATCATACCACAGTGTGGA 61.579 44.000 42.06 27.48 44.94 4.02
734 831 4.384537 AATGGAGATCATACCACAGTGTGG 60.385 45.833 35.76 35.76 46.29 4.17
735 832 3.893326 TGGAGATCATACCACAGTGTG 57.107 47.619 16.70 16.70 36.50 3.82
736 833 4.718774 AGAATGGAGATCATACCACAGTGT 59.281 41.667 8.13 0.00 39.06 3.55
737 834 5.287674 AGAATGGAGATCATACCACAGTG 57.712 43.478 8.13 0.00 39.06 3.66
738 835 5.664908 AGAAGAATGGAGATCATACCACAGT 59.335 40.000 8.13 0.00 39.06 3.55
739 836 6.041865 AGAGAAGAATGGAGATCATACCACAG 59.958 42.308 8.13 0.00 39.06 3.66
740 837 5.901853 AGAGAAGAATGGAGATCATACCACA 59.098 40.000 8.13 0.00 39.06 4.17
741 838 6.418057 AGAGAAGAATGGAGATCATACCAC 57.582 41.667 8.13 0.00 39.06 4.16
742 839 7.092712 ACAAAGAGAAGAATGGAGATCATACCA 60.093 37.037 8.35 8.35 40.57 3.25
743 840 7.278875 ACAAAGAGAAGAATGGAGATCATACC 58.721 38.462 0.00 0.00 34.44 2.73
744 841 7.984050 TGACAAAGAGAAGAATGGAGATCATAC 59.016 37.037 0.00 0.00 34.44 2.39
745 842 8.082672 TGACAAAGAGAAGAATGGAGATCATA 57.917 34.615 0.00 0.00 34.44 2.15
746 843 6.955364 TGACAAAGAGAAGAATGGAGATCAT 58.045 36.000 0.00 0.00 37.79 2.45
747 844 6.364568 TGACAAAGAGAAGAATGGAGATCA 57.635 37.500 0.00 0.00 0.00 2.92
748 845 7.173907 TGTTTGACAAAGAGAAGAATGGAGATC 59.826 37.037 0.00 0.00 0.00 2.75
749 846 7.000472 TGTTTGACAAAGAGAAGAATGGAGAT 59.000 34.615 0.00 0.00 0.00 2.75
750 847 6.356556 TGTTTGACAAAGAGAAGAATGGAGA 58.643 36.000 0.00 0.00 0.00 3.71
751 848 6.624352 TGTTTGACAAAGAGAAGAATGGAG 57.376 37.500 0.00 0.00 0.00 3.86
752 849 6.207417 GGATGTTTGACAAAGAGAAGAATGGA 59.793 38.462 0.00 0.00 0.00 3.41
753 850 6.385033 GGATGTTTGACAAAGAGAAGAATGG 58.615 40.000 0.00 0.00 0.00 3.16
754 851 6.082338 CGGATGTTTGACAAAGAGAAGAATG 58.918 40.000 0.00 0.00 0.00 2.67
755 852 5.765182 ACGGATGTTTGACAAAGAGAAGAAT 59.235 36.000 0.00 0.00 0.00 2.40
756 853 5.007626 CACGGATGTTTGACAAAGAGAAGAA 59.992 40.000 0.00 0.00 0.00 2.52
757 854 4.511454 CACGGATGTTTGACAAAGAGAAGA 59.489 41.667 0.00 0.00 0.00 2.87
758 855 4.273480 ACACGGATGTTTGACAAAGAGAAG 59.727 41.667 0.00 0.00 34.46 2.85
759 856 4.035091 CACACGGATGTTTGACAAAGAGAA 59.965 41.667 0.00 0.00 36.72 2.87
760 857 3.559655 CACACGGATGTTTGACAAAGAGA 59.440 43.478 0.00 0.00 36.72 3.10
761 858 3.849645 GCACACGGATGTTTGACAAAGAG 60.850 47.826 0.00 0.00 36.72 2.85
762 859 2.032799 GCACACGGATGTTTGACAAAGA 59.967 45.455 0.00 0.00 36.72 2.52
763 860 2.033299 AGCACACGGATGTTTGACAAAG 59.967 45.455 0.00 0.00 36.72 2.77
764 861 2.020720 AGCACACGGATGTTTGACAAA 58.979 42.857 0.00 0.00 36.72 2.83
765 862 1.601903 GAGCACACGGATGTTTGACAA 59.398 47.619 0.00 0.00 36.72 3.18
766 863 1.202639 AGAGCACACGGATGTTTGACA 60.203 47.619 0.00 0.00 36.72 3.58
767 864 1.461127 GAGAGCACACGGATGTTTGAC 59.539 52.381 0.00 0.00 36.72 3.18
768 865 1.795768 GAGAGCACACGGATGTTTGA 58.204 50.000 0.00 0.00 36.72 2.69
769 866 0.439985 CGAGAGCACACGGATGTTTG 59.560 55.000 0.00 0.00 36.72 2.93
770 867 0.317160 TCGAGAGCACACGGATGTTT 59.683 50.000 0.88 0.00 36.72 2.83
771 868 0.109086 CTCGAGAGCACACGGATGTT 60.109 55.000 6.58 0.00 36.72 2.71
772 869 1.508545 CTCGAGAGCACACGGATGT 59.491 57.895 6.58 0.00 40.80 3.06
773 870 1.226802 CCTCGAGAGCACACGGATG 60.227 63.158 15.71 0.00 0.00 3.51
774 871 1.658686 GACCTCGAGAGCACACGGAT 61.659 60.000 15.71 0.00 0.00 4.18
775 872 2.282251 ACCTCGAGAGCACACGGA 60.282 61.111 15.71 0.00 0.00 4.69
776 873 2.179517 GACCTCGAGAGCACACGG 59.820 66.667 15.71 0.00 0.00 4.94
777 874 1.154131 CAGACCTCGAGAGCACACG 60.154 63.158 15.71 0.00 0.00 4.49
778 875 0.109504 GACAGACCTCGAGAGCACAC 60.110 60.000 15.71 0.00 0.00 3.82
779 876 1.244697 GGACAGACCTCGAGAGCACA 61.245 60.000 15.71 0.00 35.41 4.57
780 877 1.244697 TGGACAGACCTCGAGAGCAC 61.245 60.000 15.71 2.05 39.86 4.40
781 878 0.539669 TTGGACAGACCTCGAGAGCA 60.540 55.000 15.71 0.00 39.86 4.26
782 879 0.603569 TTTGGACAGACCTCGAGAGC 59.396 55.000 15.71 5.11 39.86 4.09
783 880 3.060602 GTTTTTGGACAGACCTCGAGAG 58.939 50.000 15.71 6.69 39.86 3.20
784 881 2.432874 TGTTTTTGGACAGACCTCGAGA 59.567 45.455 15.71 0.00 39.86 4.04
785 882 2.833794 TGTTTTTGGACAGACCTCGAG 58.166 47.619 5.13 5.13 39.86 4.04
786 883 2.992124 TGTTTTTGGACAGACCTCGA 57.008 45.000 0.00 0.00 39.86 4.04
794 891 3.318839 CAGGATTCAGCTGTTTTTGGACA 59.681 43.478 14.67 0.00 0.00 4.02
795 892 3.319122 ACAGGATTCAGCTGTTTTTGGAC 59.681 43.478 14.67 0.00 0.00 4.02
796 893 3.318839 CACAGGATTCAGCTGTTTTTGGA 59.681 43.478 14.67 0.00 0.00 3.53
797 894 3.645884 CACAGGATTCAGCTGTTTTTGG 58.354 45.455 14.67 3.73 0.00 3.28
798 895 3.054878 GCACAGGATTCAGCTGTTTTTG 58.945 45.455 14.67 9.61 0.00 2.44
799 896 2.961062 AGCACAGGATTCAGCTGTTTTT 59.039 40.909 14.67 0.00 35.72 1.94
800 897 2.295349 CAGCACAGGATTCAGCTGTTTT 59.705 45.455 14.67 0.00 46.92 2.43
801 898 1.884579 CAGCACAGGATTCAGCTGTTT 59.115 47.619 14.67 1.82 46.92 2.83
802 899 1.531423 CAGCACAGGATTCAGCTGTT 58.469 50.000 14.67 2.24 46.92 3.16
803 900 3.244764 CAGCACAGGATTCAGCTGT 57.755 52.632 14.67 0.00 46.92 4.40
805 902 1.281287 ACATCAGCACAGGATTCAGCT 59.719 47.619 0.00 0.00 37.95 4.24
806 903 1.747709 ACATCAGCACAGGATTCAGC 58.252 50.000 0.00 0.00 0.00 4.26
807 904 4.449131 ACATACATCAGCACAGGATTCAG 58.551 43.478 0.00 0.00 0.00 3.02
808 905 4.492494 ACATACATCAGCACAGGATTCA 57.508 40.909 0.00 0.00 0.00 2.57
809 906 4.497006 GCAACATACATCAGCACAGGATTC 60.497 45.833 0.00 0.00 0.00 2.52
810 907 3.379372 GCAACATACATCAGCACAGGATT 59.621 43.478 0.00 0.00 0.00 3.01
811 908 2.947652 GCAACATACATCAGCACAGGAT 59.052 45.455 0.00 0.00 0.00 3.24
812 909 2.026915 AGCAACATACATCAGCACAGGA 60.027 45.455 0.00 0.00 0.00 3.86
813 910 2.096980 CAGCAACATACATCAGCACAGG 59.903 50.000 0.00 0.00 0.00 4.00
814 911 2.096980 CCAGCAACATACATCAGCACAG 59.903 50.000 0.00 0.00 0.00 3.66
815 912 2.086094 CCAGCAACATACATCAGCACA 58.914 47.619 0.00 0.00 0.00 4.57
816 913 1.402968 CCCAGCAACATACATCAGCAC 59.597 52.381 0.00 0.00 0.00 4.40
817 914 1.004628 ACCCAGCAACATACATCAGCA 59.995 47.619 0.00 0.00 0.00 4.41
818 915 1.755179 ACCCAGCAACATACATCAGC 58.245 50.000 0.00 0.00 0.00 4.26
819 916 2.159338 GCAACCCAGCAACATACATCAG 60.159 50.000 0.00 0.00 0.00 2.90
820 917 1.818060 GCAACCCAGCAACATACATCA 59.182 47.619 0.00 0.00 0.00 3.07
821 918 1.134946 GGCAACCCAGCAACATACATC 59.865 52.381 0.00 0.00 35.83 3.06
822 919 1.185315 GGCAACCCAGCAACATACAT 58.815 50.000 0.00 0.00 35.83 2.29
823 920 1.240641 CGGCAACCCAGCAACATACA 61.241 55.000 0.00 0.00 35.83 2.29
824 921 1.506262 CGGCAACCCAGCAACATAC 59.494 57.895 0.00 0.00 35.83 2.39
825 922 1.677300 CCGGCAACCCAGCAACATA 60.677 57.895 0.00 0.00 35.83 2.29
826 923 2.990967 CCGGCAACCCAGCAACAT 60.991 61.111 0.00 0.00 35.83 2.71
832 929 3.673484 CAACAGCCGGCAACCCAG 61.673 66.667 31.54 13.06 0.00 4.45
840 937 0.676466 TCAACTATGCCAACAGCCGG 60.676 55.000 0.00 0.00 42.71 6.13
841 938 1.064505 CATCAACTATGCCAACAGCCG 59.935 52.381 0.00 0.00 42.71 5.52
842 939 2.094675 ACATCAACTATGCCAACAGCC 58.905 47.619 0.00 0.00 42.71 4.85
843 940 5.334414 GCTATACATCAACTATGCCAACAGC 60.334 44.000 0.00 0.00 39.39 4.40
844 941 5.107337 CGCTATACATCAACTATGCCAACAG 60.107 44.000 0.00 0.00 39.39 3.16
845 942 4.749598 CGCTATACATCAACTATGCCAACA 59.250 41.667 0.00 0.00 39.39 3.33
846 943 4.152402 CCGCTATACATCAACTATGCCAAC 59.848 45.833 0.00 0.00 39.39 3.77
847 944 4.314961 CCGCTATACATCAACTATGCCAA 58.685 43.478 0.00 0.00 39.39 4.52
848 945 3.864540 GCCGCTATACATCAACTATGCCA 60.865 47.826 0.00 0.00 39.39 4.92
849 946 2.673368 GCCGCTATACATCAACTATGCC 59.327 50.000 0.00 0.00 39.39 4.40
850 947 2.673368 GGCCGCTATACATCAACTATGC 59.327 50.000 0.00 0.00 39.39 3.14
851 948 3.928992 CAGGCCGCTATACATCAACTATG 59.071 47.826 0.00 0.00 41.74 2.23
852 949 3.617531 GCAGGCCGCTATACATCAACTAT 60.618 47.826 11.61 0.00 37.77 2.12
853 950 2.288825 GCAGGCCGCTATACATCAACTA 60.289 50.000 11.61 0.00 37.77 2.24
854 951 1.541233 GCAGGCCGCTATACATCAACT 60.541 52.381 11.61 0.00 37.77 3.16
855 952 0.868406 GCAGGCCGCTATACATCAAC 59.132 55.000 11.61 0.00 37.77 3.18
856 953 3.305709 GCAGGCCGCTATACATCAA 57.694 52.632 11.61 0.00 37.77 2.57
868 965 1.095807 GTATTTGGTCGGAGCAGGCC 61.096 60.000 10.06 0.00 36.18 5.19
869 966 0.107654 AGTATTTGGTCGGAGCAGGC 60.108 55.000 10.06 2.77 0.00 4.85
870 967 2.009774 CAAGTATTTGGTCGGAGCAGG 58.990 52.381 10.06 0.00 0.00 4.85
871 968 2.699954 ACAAGTATTTGGTCGGAGCAG 58.300 47.619 10.06 0.00 38.66 4.24
872 969 2.851263 ACAAGTATTTGGTCGGAGCA 57.149 45.000 5.66 5.66 38.66 4.26
873 970 3.998341 TGTTACAAGTATTTGGTCGGAGC 59.002 43.478 2.81 0.00 38.66 4.70
874 971 4.390909 GGTGTTACAAGTATTTGGTCGGAG 59.609 45.833 2.81 0.00 38.66 4.63
875 972 4.040706 AGGTGTTACAAGTATTTGGTCGGA 59.959 41.667 2.81 0.00 38.66 4.55
876 973 4.320870 AGGTGTTACAAGTATTTGGTCGG 58.679 43.478 2.81 0.00 38.66 4.79
877 974 5.934935 AAGGTGTTACAAGTATTTGGTCG 57.065 39.130 2.81 0.00 38.66 4.79
878 975 6.489022 AGGAAAGGTGTTACAAGTATTTGGTC 59.511 38.462 2.81 0.00 38.66 4.02
879 976 6.370453 AGGAAAGGTGTTACAAGTATTTGGT 58.630 36.000 2.81 0.00 38.66 3.67
880 977 6.715264 AGAGGAAAGGTGTTACAAGTATTTGG 59.285 38.462 2.81 0.00 38.66 3.28
881 978 7.745620 AGAGGAAAGGTGTTACAAGTATTTG 57.254 36.000 0.00 0.00 40.24 2.32
900 997 9.965902 AGCTTCTCTTTTTCATTTATAAGAGGA 57.034 29.630 0.00 0.00 42.33 3.71
902 999 9.500864 GCAGCTTCTCTTTTTCATTTATAAGAG 57.499 33.333 0.00 0.00 43.04 2.85
903 1000 9.236006 AGCAGCTTCTCTTTTTCATTTATAAGA 57.764 29.630 0.00 0.00 0.00 2.10
904 1001 9.500864 GAGCAGCTTCTCTTTTTCATTTATAAG 57.499 33.333 6.09 0.00 0.00 1.73
905 1002 9.236006 AGAGCAGCTTCTCTTTTTCATTTATAA 57.764 29.630 10.36 0.00 40.32 0.98
906 1003 8.671921 CAGAGCAGCTTCTCTTTTTCATTTATA 58.328 33.333 13.62 0.00 41.22 0.98
907 1004 7.392673 TCAGAGCAGCTTCTCTTTTTCATTTAT 59.607 33.333 13.62 0.00 41.22 1.40
908 1005 6.712095 TCAGAGCAGCTTCTCTTTTTCATTTA 59.288 34.615 13.62 0.00 41.22 1.40
909 1006 5.533903 TCAGAGCAGCTTCTCTTTTTCATTT 59.466 36.000 13.62 0.00 41.22 2.32
910 1007 5.048852 GTCAGAGCAGCTTCTCTTTTTCATT 60.049 40.000 13.62 0.00 41.22 2.57
911 1008 4.455190 GTCAGAGCAGCTTCTCTTTTTCAT 59.545 41.667 13.62 0.00 41.22 2.57
912 1009 3.812053 GTCAGAGCAGCTTCTCTTTTTCA 59.188 43.478 13.62 0.00 41.22 2.69
913 1010 3.812053 TGTCAGAGCAGCTTCTCTTTTTC 59.188 43.478 13.62 5.28 41.22 2.29
914 1011 3.813443 TGTCAGAGCAGCTTCTCTTTTT 58.187 40.909 13.62 0.00 41.22 1.94
915 1012 3.401182 CTGTCAGAGCAGCTTCTCTTTT 58.599 45.455 13.62 0.00 41.22 2.27
916 1013 3.042871 CTGTCAGAGCAGCTTCTCTTT 57.957 47.619 13.62 0.00 41.22 2.52
917 1014 2.747396 CTGTCAGAGCAGCTTCTCTT 57.253 50.000 13.62 0.00 41.22 2.85
927 1024 0.939577 TGACGAAACGCTGTCAGAGC 60.940 55.000 3.32 0.00 45.20 4.09
928 1025 1.487482 TTGACGAAACGCTGTCAGAG 58.513 50.000 3.32 2.37 45.08 3.35
929 1026 1.929230 TTTGACGAAACGCTGTCAGA 58.071 45.000 3.32 0.00 45.08 3.27
930 1027 2.730183 TTTTGACGAAACGCTGTCAG 57.270 45.000 0.00 0.00 45.08 3.51
954 1051 4.072131 ACAGATAGCACACGGATGTTTTT 58.928 39.130 0.00 0.00 36.72 1.94
955 1052 3.674997 ACAGATAGCACACGGATGTTTT 58.325 40.909 0.00 0.00 36.72 2.43
962 1059 2.159653 GCTCAAAACAGATAGCACACGG 60.160 50.000 0.00 0.00 35.05 4.94
964 1061 2.162408 GGGCTCAAAACAGATAGCACAC 59.838 50.000 0.00 0.00 38.28 3.82
969 1066 3.922171 AGAGGGGCTCAAAACAGATAG 57.078 47.619 0.00 0.00 32.06 2.08
1031 1131 2.049156 GGCCAAACTTTGCCGAGC 60.049 61.111 0.00 0.00 38.00 5.03
1129 1237 3.191791 TGGTGCAATGATCAGTGTCAATG 59.808 43.478 22.89 0.00 33.23 2.82
1159 1267 1.702401 TCACTCCATTACCCTGCAACA 59.298 47.619 0.00 0.00 0.00 3.33
1401 1510 6.934645 TGGAAATTCTAACACGAAGATGTTCT 59.065 34.615 0.66 0.00 41.89 3.01
1423 1532 4.361783 TCCCATCAGATACAGAACTTGGA 58.638 43.478 0.00 0.00 0.00 3.53
1517 1627 1.749634 GAGCGTTAGCCTCTCCTGTTA 59.250 52.381 0.00 0.00 46.67 2.41
1570 1702 4.862371 AGGGTAGTGACTTTCTCTAGGAG 58.138 47.826 0.00 0.00 0.00 3.69
1621 1755 0.321122 AAGTCCCTGCTGAGCTTTCG 60.321 55.000 5.83 0.00 0.00 3.46
1633 1767 2.225293 TGCCTACACTCAGTAAGTCCCT 60.225 50.000 0.00 0.00 35.45 4.20
1684 1818 3.995199 TCTGTGAACATGAGACAGTTCC 58.005 45.455 17.23 0.00 42.57 3.62
1691 1825 6.880529 TGCTTGATAATTCTGTGAACATGAGA 59.119 34.615 0.00 0.00 0.00 3.27
1692 1826 7.080353 TGCTTGATAATTCTGTGAACATGAG 57.920 36.000 0.00 0.00 0.00 2.90
1703 1837 5.664294 TTTGCCACATGCTTGATAATTCT 57.336 34.783 6.60 0.00 42.00 2.40
1714 1848 2.322161 GATGCGATATTTGCCACATGC 58.678 47.619 0.00 0.00 41.77 4.06
1725 1859 1.896220 AAACATGCCGGATGCGATAT 58.104 45.000 8.71 0.00 45.60 1.63
1730 1864 6.489675 CAGATATATAAAACATGCCGGATGC 58.510 40.000 5.05 0.00 41.77 3.91
1735 1869 6.845302 ACATGCAGATATATAAAACATGCCG 58.155 36.000 13.39 6.02 37.52 5.69
1748 1883 8.080417 GCATAAATTCTGTGAACATGCAGATAT 58.920 33.333 13.58 0.00 40.83 1.63
1749 1884 7.420002 GCATAAATTCTGTGAACATGCAGATA 58.580 34.615 13.58 0.00 40.83 1.98
1750 1885 6.270815 GCATAAATTCTGTGAACATGCAGAT 58.729 36.000 13.58 0.00 40.83 2.90
1758 1893 4.957967 CGATCACGCATAAATTCTGTGAAC 59.042 41.667 8.13 0.00 42.24 3.18
1763 1898 6.696825 ATAGTCGATCACGCATAAATTCTG 57.303 37.500 0.00 0.00 39.58 3.02
1780 1915 2.527100 GGTGAGACACCGAAATAGTCG 58.473 52.381 5.17 0.00 44.95 4.18
1800 1935 1.171308 CTCAATGCAGGGTTCCACAG 58.829 55.000 0.00 0.00 0.00 3.66
1821 1956 5.981315 AGTTCATTTCTGTGAGCAACAAATG 59.019 36.000 9.20 9.20 38.67 2.32
1865 2000 1.268743 GCCAATTCAATAGACGGCAGC 60.269 52.381 0.00 0.00 39.38 5.25
1866 2001 2.016318 TGCCAATTCAATAGACGGCAG 58.984 47.619 0.00 0.00 44.27 4.85
1871 2006 7.956558 CAAGAAACATTGCCAATTCAATAGAC 58.043 34.615 0.00 0.00 35.12 2.59
1897 2041 7.383102 AGCACAACATACTGGAGAAATTAAG 57.617 36.000 0.00 0.00 0.00 1.85
1907 2051 6.500684 AAGACAAATAGCACAACATACTGG 57.499 37.500 0.00 0.00 0.00 4.00
1977 2121 7.403231 TGATTCCCTTAATAGAACTGAGACCTT 59.597 37.037 0.00 0.00 0.00 3.50
1981 2125 6.605995 TCGTGATTCCCTTAATAGAACTGAGA 59.394 38.462 0.00 0.00 0.00 3.27
2026 2171 6.660949 GCCCTACTCAAAGGCAATGATATATT 59.339 38.462 0.00 0.00 46.34 1.28
2027 2172 6.183347 GCCCTACTCAAAGGCAATGATATAT 58.817 40.000 0.00 0.00 46.34 0.86
2028 2173 5.560724 GCCCTACTCAAAGGCAATGATATA 58.439 41.667 0.00 0.00 46.34 0.86
2029 2174 4.401925 GCCCTACTCAAAGGCAATGATAT 58.598 43.478 0.00 0.00 46.34 1.63
2030 2175 3.820557 GCCCTACTCAAAGGCAATGATA 58.179 45.455 0.00 0.00 46.34 2.15
2031 2176 2.659428 GCCCTACTCAAAGGCAATGAT 58.341 47.619 0.00 0.00 46.34 2.45
2032 2177 2.128771 GCCCTACTCAAAGGCAATGA 57.871 50.000 0.00 0.00 46.34 2.57
2038 2183 3.430453 TCCAAAATGCCCTACTCAAAGG 58.570 45.455 0.00 0.00 36.30 3.11
2039 2184 4.156739 GTCTCCAAAATGCCCTACTCAAAG 59.843 45.833 0.00 0.00 0.00 2.77
2040 2185 4.079253 GTCTCCAAAATGCCCTACTCAAA 58.921 43.478 0.00 0.00 0.00 2.69
2041 2186 3.561313 GGTCTCCAAAATGCCCTACTCAA 60.561 47.826 0.00 0.00 0.00 3.02
2042 2187 2.026262 GGTCTCCAAAATGCCCTACTCA 60.026 50.000 0.00 0.00 0.00 3.41
2043 2188 2.644676 GGTCTCCAAAATGCCCTACTC 58.355 52.381 0.00 0.00 0.00 2.59
2044 2189 1.065418 CGGTCTCCAAAATGCCCTACT 60.065 52.381 0.00 0.00 0.00 2.57
2045 2190 1.065709 TCGGTCTCCAAAATGCCCTAC 60.066 52.381 0.00 0.00 0.00 3.18
2046 2191 1.209504 CTCGGTCTCCAAAATGCCCTA 59.790 52.381 0.00 0.00 0.00 3.53
2047 2192 0.035056 CTCGGTCTCCAAAATGCCCT 60.035 55.000 0.00 0.00 0.00 5.19
2048 2193 1.657751 GCTCGGTCTCCAAAATGCCC 61.658 60.000 0.00 0.00 0.00 5.36
2049 2194 0.678048 AGCTCGGTCTCCAAAATGCC 60.678 55.000 0.00 0.00 0.00 4.40
2050 2195 0.729690 GAGCTCGGTCTCCAAAATGC 59.270 55.000 0.00 0.00 0.00 3.56
2058 2203 1.739049 CTCCATGGAGCTCGGTCTC 59.261 63.158 28.45 0.00 35.31 3.36
2059 2204 3.947173 CTCCATGGAGCTCGGTCT 58.053 61.111 28.45 0.00 35.31 3.85
2067 2212 4.280819 TCAAAATAAAGGGCTCCATGGAG 58.719 43.478 33.73 33.73 44.56 3.86
2068 2213 4.329638 TCAAAATAAAGGGCTCCATGGA 57.670 40.909 15.27 15.27 0.00 3.41
2069 2214 5.419239 TTTCAAAATAAAGGGCTCCATGG 57.581 39.130 4.97 4.97 0.00 3.66
2070 2215 7.926674 ATTTTTCAAAATAAAGGGCTCCATG 57.073 32.000 0.00 0.00 36.88 3.66
2071 2216 8.162746 TGAATTTTTCAAAATAAAGGGCTCCAT 58.837 29.630 0.00 0.00 37.62 3.41
2072 2217 7.512992 TGAATTTTTCAAAATAAAGGGCTCCA 58.487 30.769 0.00 0.00 37.62 3.86
2073 2218 7.977789 TGAATTTTTCAAAATAAAGGGCTCC 57.022 32.000 0.00 0.00 37.62 4.70
2124 2269 9.357652 GCATACATGTGTAATGTTTTTCAGAAT 57.642 29.630 9.11 0.00 33.76 2.40
2125 2270 8.355913 TGCATACATGTGTAATGTTTTTCAGAA 58.644 29.630 9.11 0.00 33.76 3.02
2126 2271 7.880105 TGCATACATGTGTAATGTTTTTCAGA 58.120 30.769 9.11 0.00 33.76 3.27
2127 2272 8.518151 TTGCATACATGTGTAATGTTTTTCAG 57.482 30.769 9.11 0.00 33.76 3.02
2128 2273 7.598118 CCTTGCATACATGTGTAATGTTTTTCA 59.402 33.333 9.11 0.00 33.76 2.69
2129 2274 7.812191 TCCTTGCATACATGTGTAATGTTTTTC 59.188 33.333 9.11 0.00 33.76 2.29
2130 2275 7.665690 TCCTTGCATACATGTGTAATGTTTTT 58.334 30.769 9.11 0.00 33.76 1.94
2131 2276 7.225784 TCCTTGCATACATGTGTAATGTTTT 57.774 32.000 9.11 0.00 33.76 2.43
2132 2277 6.832520 TCCTTGCATACATGTGTAATGTTT 57.167 33.333 9.11 0.00 33.76 2.83
2133 2278 6.377996 ACATCCTTGCATACATGTGTAATGTT 59.622 34.615 9.11 0.00 33.76 2.71
2134 2279 5.887598 ACATCCTTGCATACATGTGTAATGT 59.112 36.000 9.11 4.43 33.76 2.71
2135 2280 6.381481 ACATCCTTGCATACATGTGTAATG 57.619 37.500 9.11 5.63 33.76 1.90
2136 2281 8.518430 TTTACATCCTTGCATACATGTGTAAT 57.482 30.769 9.11 0.00 32.76 1.89
2137 2282 7.609918 ACTTTACATCCTTGCATACATGTGTAA 59.390 33.333 9.11 1.48 33.76 2.41
2138 2283 7.065683 CACTTTACATCCTTGCATACATGTGTA 59.934 37.037 9.11 0.00 31.83 2.90
2139 2284 5.945784 ACTTTACATCCTTGCATACATGTGT 59.054 36.000 9.11 0.00 31.83 3.72
2140 2285 6.127925 ACACTTTACATCCTTGCATACATGTG 60.128 38.462 9.11 0.00 31.83 3.21
2141 2286 5.945784 ACACTTTACATCCTTGCATACATGT 59.054 36.000 2.69 2.69 33.95 3.21
2142 2287 6.441093 ACACTTTACATCCTTGCATACATG 57.559 37.500 0.00 0.00 0.00 3.21
2143 2288 7.775093 ACATACACTTTACATCCTTGCATACAT 59.225 33.333 0.00 0.00 0.00 2.29
2144 2289 7.065683 CACATACACTTTACATCCTTGCATACA 59.934 37.037 0.00 0.00 0.00 2.29
2145 2290 7.065803 ACACATACACTTTACATCCTTGCATAC 59.934 37.037 0.00 0.00 0.00 2.39
2146 2291 7.065683 CACACATACACTTTACATCCTTGCATA 59.934 37.037 0.00 0.00 0.00 3.14
2147 2292 5.945784 ACACATACACTTTACATCCTTGCAT 59.054 36.000 0.00 0.00 0.00 3.96
2148 2293 5.181056 CACACATACACTTTACATCCTTGCA 59.819 40.000 0.00 0.00 0.00 4.08
2149 2294 5.411361 TCACACATACACTTTACATCCTTGC 59.589 40.000 0.00 0.00 0.00 4.01
2150 2295 7.433708 TTCACACATACACTTTACATCCTTG 57.566 36.000 0.00 0.00 0.00 3.61
2151 2296 8.458573 TTTTCACACATACACTTTACATCCTT 57.541 30.769 0.00 0.00 0.00 3.36
2152 2297 8.458573 TTTTTCACACATACACTTTACATCCT 57.541 30.769 0.00 0.00 0.00 3.24
2153 2298 9.691362 AATTTTTCACACATACACTTTACATCC 57.309 29.630 0.00 0.00 0.00 3.51
2158 2303 9.743057 CCTGAAATTTTTCACACATACACTTTA 57.257 29.630 1.66 0.00 41.88 1.85
2159 2304 8.474025 TCCTGAAATTTTTCACACATACACTTT 58.526 29.630 1.66 0.00 41.88 2.66
2160 2305 8.006298 TCCTGAAATTTTTCACACATACACTT 57.994 30.769 1.66 0.00 41.88 3.16
2161 2306 7.581213 TCCTGAAATTTTTCACACATACACT 57.419 32.000 1.66 0.00 41.88 3.55
2162 2307 8.081633 TCATCCTGAAATTTTTCACACATACAC 58.918 33.333 1.66 0.00 41.88 2.90
2163 2308 8.175925 TCATCCTGAAATTTTTCACACATACA 57.824 30.769 1.66 0.00 41.88 2.29
2164 2309 9.474920 TTTCATCCTGAAATTTTTCACACATAC 57.525 29.630 1.66 0.00 41.02 2.39
2179 2324 6.404623 CGCAATTCAAGGTATTTCATCCTGAA 60.405 38.462 0.00 0.00 34.03 3.02
2180 2325 5.066375 CGCAATTCAAGGTATTTCATCCTGA 59.934 40.000 0.00 0.00 33.97 3.86
2181 2326 5.066375 TCGCAATTCAAGGTATTTCATCCTG 59.934 40.000 0.00 0.00 33.97 3.86
2182 2327 5.192927 TCGCAATTCAAGGTATTTCATCCT 58.807 37.500 0.00 0.00 35.34 3.24
2183 2328 5.499139 TCGCAATTCAAGGTATTTCATCC 57.501 39.130 0.00 0.00 0.00 3.51
2184 2329 4.972440 GCTCGCAATTCAAGGTATTTCATC 59.028 41.667 0.00 0.00 0.00 2.92
2185 2330 4.641989 AGCTCGCAATTCAAGGTATTTCAT 59.358 37.500 0.00 0.00 0.00 2.57
2186 2331 4.009675 AGCTCGCAATTCAAGGTATTTCA 58.990 39.130 0.00 0.00 0.00 2.69
2187 2332 4.346129 CAGCTCGCAATTCAAGGTATTTC 58.654 43.478 0.00 0.00 0.00 2.17
2188 2333 3.428045 GCAGCTCGCAATTCAAGGTATTT 60.428 43.478 3.64 0.00 41.79 1.40
2189 2334 2.098117 GCAGCTCGCAATTCAAGGTATT 59.902 45.455 3.64 0.00 41.79 1.89
2190 2335 1.672881 GCAGCTCGCAATTCAAGGTAT 59.327 47.619 3.64 0.00 41.79 2.73
2191 2336 1.086696 GCAGCTCGCAATTCAAGGTA 58.913 50.000 3.64 0.00 41.79 3.08
2192 2337 1.878775 GCAGCTCGCAATTCAAGGT 59.121 52.632 3.64 0.00 41.79 3.50
2193 2338 4.779819 GCAGCTCGCAATTCAAGG 57.220 55.556 3.64 0.00 41.79 3.61
2240 2385 9.665264 GGCTTTTTAGCATATGTACTGTTTATC 57.335 33.333 4.29 0.00 36.33 1.75
2241 2386 9.408648 AGGCTTTTTAGCATATGTACTGTTTAT 57.591 29.630 4.29 0.00 36.33 1.40
2242 2387 8.801882 AGGCTTTTTAGCATATGTACTGTTTA 57.198 30.769 4.29 0.00 36.33 2.01
2243 2388 7.703058 AGGCTTTTTAGCATATGTACTGTTT 57.297 32.000 4.29 0.00 36.33 2.83
2244 2389 7.703058 AAGGCTTTTTAGCATATGTACTGTT 57.297 32.000 4.29 0.00 36.33 3.16
2245 2390 8.265055 TCTAAGGCTTTTTAGCATATGTACTGT 58.735 33.333 4.45 0.00 36.33 3.55
2246 2391 8.662781 TCTAAGGCTTTTTAGCATATGTACTG 57.337 34.615 4.45 0.00 36.33 2.74
2247 2392 9.853177 AATCTAAGGCTTTTTAGCATATGTACT 57.147 29.630 4.45 0.00 36.33 2.73
2250 2395 8.971073 ACAAATCTAAGGCTTTTTAGCATATGT 58.029 29.630 4.45 0.00 36.33 2.29
2251 2396 9.455847 GACAAATCTAAGGCTTTTTAGCATATG 57.544 33.333 4.45 0.00 36.33 1.78
2252 2397 9.413734 AGACAAATCTAAGGCTTTTTAGCATAT 57.586 29.630 4.45 0.00 32.37 1.78
2253 2398 8.807948 AGACAAATCTAAGGCTTTTTAGCATA 57.192 30.769 4.45 0.00 32.37 3.14
2254 2399 7.709149 AGACAAATCTAAGGCTTTTTAGCAT 57.291 32.000 4.45 0.00 32.37 3.79
2255 2400 7.524717 AAGACAAATCTAAGGCTTTTTAGCA 57.475 32.000 4.45 0.00 33.57 3.49
2256 2401 8.818141 AAAAGACAAATCTAAGGCTTTTTAGC 57.182 30.769 4.45 0.00 33.29 3.09
2285 2430 7.762159 TCGAAATACAATAACATGTGAGCTACA 59.238 33.333 0.00 0.00 44.87 2.74
2286 2431 8.056571 GTCGAAATACAATAACATGTGAGCTAC 58.943 37.037 0.00 0.00 34.75 3.58
2287 2432 7.223971 GGTCGAAATACAATAACATGTGAGCTA 59.776 37.037 0.00 0.00 34.75 3.32
2288 2433 6.037172 GGTCGAAATACAATAACATGTGAGCT 59.963 38.462 0.00 0.00 34.75 4.09
2289 2434 6.037172 AGGTCGAAATACAATAACATGTGAGC 59.963 38.462 0.00 0.00 34.75 4.26
2290 2435 7.539712 AGGTCGAAATACAATAACATGTGAG 57.460 36.000 0.00 0.00 34.75 3.51
2291 2436 9.438228 TTTAGGTCGAAATACAATAACATGTGA 57.562 29.630 0.00 0.00 34.75 3.58
2300 2445 8.921670 GTGCAAATTTTTAGGTCGAAATACAAT 58.078 29.630 0.00 0.00 0.00 2.71
2301 2446 7.921214 TGTGCAAATTTTTAGGTCGAAATACAA 59.079 29.630 0.00 0.00 0.00 2.41
2302 2447 7.380065 GTGTGCAAATTTTTAGGTCGAAATACA 59.620 33.333 0.00 0.00 0.00 2.29
2303 2448 7.380065 TGTGTGCAAATTTTTAGGTCGAAATAC 59.620 33.333 0.00 0.00 0.00 1.89
2304 2449 7.426410 TGTGTGCAAATTTTTAGGTCGAAATA 58.574 30.769 0.00 0.00 0.00 1.40
2305 2450 6.276847 TGTGTGCAAATTTTTAGGTCGAAAT 58.723 32.000 0.00 0.00 0.00 2.17
2306 2451 5.651530 TGTGTGCAAATTTTTAGGTCGAAA 58.348 33.333 0.00 0.00 0.00 3.46
2307 2452 5.250235 TGTGTGCAAATTTTTAGGTCGAA 57.750 34.783 0.00 0.00 0.00 3.71
2308 2453 4.902443 TGTGTGCAAATTTTTAGGTCGA 57.098 36.364 0.00 0.00 0.00 4.20
2309 2454 4.981674 ACATGTGTGCAAATTTTTAGGTCG 59.018 37.500 0.00 0.00 0.00 4.79
2310 2455 9.801873 ATATACATGTGTGCAAATTTTTAGGTC 57.198 29.630 9.11 0.00 0.00 3.85
2322 2467 9.586435 GCTAGATACATAATATACATGTGTGCA 57.414 33.333 9.11 0.00 37.22 4.57
2323 2468 9.809096 AGCTAGATACATAATATACATGTGTGC 57.191 33.333 9.11 0.00 37.22 4.57
2399 2544 5.600484 TGGAGGCCTTTATTTGAAAACTTCA 59.400 36.000 6.77 0.00 38.04 3.02
2400 2545 6.096673 TGGAGGCCTTTATTTGAAAACTTC 57.903 37.500 6.77 0.00 0.00 3.01
2401 2546 6.466812 CATGGAGGCCTTTATTTGAAAACTT 58.533 36.000 6.77 0.00 0.00 2.66
2402 2547 5.046376 CCATGGAGGCCTTTATTTGAAAACT 60.046 40.000 6.77 0.00 0.00 2.66
2403 2548 5.046663 TCCATGGAGGCCTTTATTTGAAAAC 60.047 40.000 11.44 0.00 37.29 2.43
2404 2549 5.090139 TCCATGGAGGCCTTTATTTGAAAA 58.910 37.500 11.44 0.00 37.29 2.29
2405 2550 4.682563 TCCATGGAGGCCTTTATTTGAAA 58.317 39.130 11.44 0.00 37.29 2.69
2406 2551 4.280819 CTCCATGGAGGCCTTTATTTGAA 58.719 43.478 31.14 0.00 38.51 2.69
2407 2552 3.902218 CTCCATGGAGGCCTTTATTTGA 58.098 45.455 31.14 3.17 38.51 2.69
2408 2553 2.363359 GCTCCATGGAGGCCTTTATTTG 59.637 50.000 36.92 13.51 42.19 2.32
2409 2554 2.245806 AGCTCCATGGAGGCCTTTATTT 59.754 45.455 36.92 13.14 42.19 1.40
2410 2555 1.855599 AGCTCCATGGAGGCCTTTATT 59.144 47.619 36.92 13.75 42.19 1.40
2411 2556 1.423161 GAGCTCCATGGAGGCCTTTAT 59.577 52.381 36.92 16.48 42.19 1.40
2412 2557 0.839946 GAGCTCCATGGAGGCCTTTA 59.160 55.000 36.92 4.58 42.19 1.85
2413 2558 1.611965 GAGCTCCATGGAGGCCTTT 59.388 57.895 36.92 17.10 42.19 3.11
2414 2559 2.739996 CGAGCTCCATGGAGGCCTT 61.740 63.158 36.92 17.72 42.19 4.35
2415 2560 3.160047 CGAGCTCCATGGAGGCCT 61.160 66.667 36.92 27.78 42.19 5.19
2416 2561 4.247380 CCGAGCTCCATGGAGGCC 62.247 72.222 36.92 23.97 42.19 5.19
2417 2562 3.453070 GACCGAGCTCCATGGAGGC 62.453 68.421 36.92 28.76 42.19 4.70
2418 2563 1.743321 GAGACCGAGCTCCATGGAGG 61.743 65.000 36.92 26.01 42.19 4.30
2419 2564 1.739049 GAGACCGAGCTCCATGGAG 59.261 63.158 33.73 33.73 44.56 3.86
2420 2565 3.941081 GAGACCGAGCTCCATGGA 58.059 61.111 15.27 15.27 0.00 3.41
2432 2577 1.401018 CGAAAATGCCAAACGGAGACC 60.401 52.381 0.00 0.00 0.00 3.85
2433 2578 1.533731 TCGAAAATGCCAAACGGAGAC 59.466 47.619 0.00 0.00 0.00 3.36
2434 2579 1.885560 TCGAAAATGCCAAACGGAGA 58.114 45.000 0.00 0.00 0.00 3.71
2435 2580 2.916716 CAATCGAAAATGCCAAACGGAG 59.083 45.455 0.00 0.00 0.00 4.63
2436 2581 2.924454 GCAATCGAAAATGCCAAACGGA 60.924 45.455 9.35 0.00 36.56 4.69
2437 2582 1.389784 GCAATCGAAAATGCCAAACGG 59.610 47.619 9.35 0.00 36.56 4.44
2438 2583 2.767566 GCAATCGAAAATGCCAAACG 57.232 45.000 9.35 0.00 36.56 3.60
2444 2589 4.494484 AGGTAAAAGGCAATCGAAAATGC 58.506 39.130 11.47 11.47 41.82 3.56
2445 2590 8.402472 TGTATAGGTAAAAGGCAATCGAAAATG 58.598 33.333 0.00 0.00 0.00 2.32
2446 2591 8.403236 GTGTATAGGTAAAAGGCAATCGAAAAT 58.597 33.333 0.00 0.00 0.00 1.82
2447 2592 7.390996 TGTGTATAGGTAAAAGGCAATCGAAAA 59.609 33.333 0.00 0.00 0.00 2.29
2448 2593 6.879993 TGTGTATAGGTAAAAGGCAATCGAAA 59.120 34.615 0.00 0.00 0.00 3.46
2449 2594 6.408035 TGTGTATAGGTAAAAGGCAATCGAA 58.592 36.000 0.00 0.00 0.00 3.71
2450 2595 5.979993 TGTGTATAGGTAAAAGGCAATCGA 58.020 37.500 0.00 0.00 0.00 3.59
2451 2596 6.861065 ATGTGTATAGGTAAAAGGCAATCG 57.139 37.500 0.00 0.00 0.00 3.34
2453 2598 8.576442 GCATAATGTGTATAGGTAAAAGGCAAT 58.424 33.333 0.00 0.00 0.00 3.56
2454 2599 7.777910 AGCATAATGTGTATAGGTAAAAGGCAA 59.222 33.333 0.00 0.00 0.00 4.52
2455 2600 7.287061 AGCATAATGTGTATAGGTAAAAGGCA 58.713 34.615 0.00 0.00 0.00 4.75
2456 2601 7.745620 AGCATAATGTGTATAGGTAAAAGGC 57.254 36.000 0.00 0.00 0.00 4.35
2463 2608 9.988815 CTCTTCTAAAGCATAATGTGTATAGGT 57.011 33.333 0.00 0.00 0.00 3.08
2464 2609 8.930760 GCTCTTCTAAAGCATAATGTGTATAGG 58.069 37.037 0.00 0.00 39.61 2.57
2465 2610 9.703892 AGCTCTTCTAAAGCATAATGTGTATAG 57.296 33.333 0.00 0.00 42.35 1.31
2467 2612 8.970859 AAGCTCTTCTAAAGCATAATGTGTAT 57.029 30.769 0.00 0.00 42.35 2.29
2468 2613 9.884636 TTAAGCTCTTCTAAAGCATAATGTGTA 57.115 29.630 0.00 0.00 42.35 2.90
2469 2614 8.669243 GTTAAGCTCTTCTAAAGCATAATGTGT 58.331 33.333 0.00 0.00 42.35 3.72
2470 2615 8.668353 TGTTAAGCTCTTCTAAAGCATAATGTG 58.332 33.333 0.00 0.00 42.35 3.21
2471 2616 8.792830 TGTTAAGCTCTTCTAAAGCATAATGT 57.207 30.769 0.00 0.00 42.35 2.71
2472 2617 9.661187 CATGTTAAGCTCTTCTAAAGCATAATG 57.339 33.333 0.00 0.00 42.35 1.90
2473 2618 8.844244 CCATGTTAAGCTCTTCTAAAGCATAAT 58.156 33.333 0.00 0.00 42.35 1.28
2474 2619 8.046708 TCCATGTTAAGCTCTTCTAAAGCATAA 58.953 33.333 0.00 0.00 42.35 1.90
2475 2620 7.564793 TCCATGTTAAGCTCTTCTAAAGCATA 58.435 34.615 0.00 0.00 42.35 3.14
2476 2621 6.418101 TCCATGTTAAGCTCTTCTAAAGCAT 58.582 36.000 0.00 0.00 42.35 3.79
2477 2622 5.804639 TCCATGTTAAGCTCTTCTAAAGCA 58.195 37.500 0.00 0.00 42.35 3.91
2478 2623 6.934048 ATCCATGTTAAGCTCTTCTAAAGC 57.066 37.500 0.00 0.00 40.14 3.51
2479 2624 9.553064 ACATATCCATGTTAAGCTCTTCTAAAG 57.447 33.333 0.00 0.00 42.98 1.85
2483 2628 8.099537 CCATACATATCCATGTTAAGCTCTTCT 58.900 37.037 0.00 0.00 42.98 2.85
2484 2629 7.880195 ACCATACATATCCATGTTAAGCTCTTC 59.120 37.037 0.00 0.00 42.98 2.87
2485 2630 7.749666 ACCATACATATCCATGTTAAGCTCTT 58.250 34.615 0.00 0.00 42.98 2.85
2486 2631 7.016563 TGACCATACATATCCATGTTAAGCTCT 59.983 37.037 0.00 0.00 42.98 4.09
2487 2632 7.161404 TGACCATACATATCCATGTTAAGCTC 58.839 38.462 0.00 0.00 42.98 4.09
2488 2633 7.078249 TGACCATACATATCCATGTTAAGCT 57.922 36.000 0.00 0.00 42.98 3.74
2489 2634 7.928307 ATGACCATACATATCCATGTTAAGC 57.072 36.000 0.00 0.00 42.98 3.09
2492 2637 9.725019 GAGAAATGACCATACATATCCATGTTA 57.275 33.333 0.00 0.00 42.98 2.41
2493 2638 8.219868 TGAGAAATGACCATACATATCCATGTT 58.780 33.333 0.00 0.00 42.98 2.71
2495 2640 8.625786 TTGAGAAATGACCATACATATCCATG 57.374 34.615 0.00 0.00 38.21 3.66
2503 2648 9.739276 AGAAACTTATTGAGAAATGACCATACA 57.261 29.630 0.00 0.00 0.00 2.29
2506 2651 9.525826 AAGAGAAACTTATTGAGAAATGACCAT 57.474 29.630 0.00 0.00 37.03 3.55
2507 2652 8.786898 CAAGAGAAACTTATTGAGAAATGACCA 58.213 33.333 0.00 0.00 37.03 4.02
2508 2653 8.239998 CCAAGAGAAACTTATTGAGAAATGACC 58.760 37.037 0.00 0.00 37.03 4.02
2509 2654 8.787852 ACCAAGAGAAACTTATTGAGAAATGAC 58.212 33.333 0.00 0.00 37.03 3.06
2510 2655 8.924511 ACCAAGAGAAACTTATTGAGAAATGA 57.075 30.769 0.00 0.00 37.03 2.57
2511 2656 8.239998 GGACCAAGAGAAACTTATTGAGAAATG 58.760 37.037 0.00 0.00 37.03 2.32
2512 2657 7.119846 CGGACCAAGAGAAACTTATTGAGAAAT 59.880 37.037 0.00 0.00 37.03 2.17
2513 2658 6.426937 CGGACCAAGAGAAACTTATTGAGAAA 59.573 38.462 0.00 0.00 37.03 2.52
2514 2659 5.932303 CGGACCAAGAGAAACTTATTGAGAA 59.068 40.000 0.00 0.00 37.03 2.87
2515 2660 5.011738 ACGGACCAAGAGAAACTTATTGAGA 59.988 40.000 0.00 0.00 37.03 3.27
2516 2661 5.120830 CACGGACCAAGAGAAACTTATTGAG 59.879 44.000 0.00 0.00 37.03 3.02
2517 2662 4.994852 CACGGACCAAGAGAAACTTATTGA 59.005 41.667 0.00 0.00 37.03 2.57
2518 2663 4.378459 GCACGGACCAAGAGAAACTTATTG 60.378 45.833 0.00 0.00 37.03 1.90
2519 2664 3.751698 GCACGGACCAAGAGAAACTTATT 59.248 43.478 0.00 0.00 37.03 1.40
2520 2665 3.244422 TGCACGGACCAAGAGAAACTTAT 60.244 43.478 0.00 0.00 37.03 1.73
2521 2666 2.103432 TGCACGGACCAAGAGAAACTTA 59.897 45.455 0.00 0.00 37.03 2.24
2522 2667 1.134220 TGCACGGACCAAGAGAAACTT 60.134 47.619 0.00 0.00 39.70 2.66
2523 2668 0.468226 TGCACGGACCAAGAGAAACT 59.532 50.000 0.00 0.00 0.00 2.66
2524 2669 1.523758 ATGCACGGACCAAGAGAAAC 58.476 50.000 0.00 0.00 0.00 2.78
2525 2670 3.410631 TTATGCACGGACCAAGAGAAA 57.589 42.857 0.00 0.00 0.00 2.52
2526 2671 3.627395 ATTATGCACGGACCAAGAGAA 57.373 42.857 0.00 0.00 0.00 2.87
2527 2672 3.627395 AATTATGCACGGACCAAGAGA 57.373 42.857 0.00 0.00 0.00 3.10
2528 2673 5.760253 AGATTAATTATGCACGGACCAAGAG 59.240 40.000 0.00 0.00 0.00 2.85
2529 2674 5.680619 AGATTAATTATGCACGGACCAAGA 58.319 37.500 0.00 0.00 0.00 3.02
2530 2675 6.377327 AAGATTAATTATGCACGGACCAAG 57.623 37.500 0.00 0.00 0.00 3.61
2531 2676 6.767524 AAAGATTAATTATGCACGGACCAA 57.232 33.333 0.00 0.00 0.00 3.67
2532 2677 6.767524 AAAAGATTAATTATGCACGGACCA 57.232 33.333 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.