Multiple sequence alignment - TraesCS4D01G356900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G356900 chr4D 100.000 7271 0 0 1 7271 505426788 505434058 0.000000e+00 13428.0
1 TraesCS4D01G356900 chr4D 84.762 105 16 0 140 244 441464134 441464238 9.980000e-19 106.0
2 TraesCS4D01G356900 chr5A 93.748 4063 179 30 1692 5736 689887794 689891799 0.000000e+00 6026.0
3 TraesCS4D01G356900 chr5A 84.041 2707 262 64 3892 6529 689913428 689916033 0.000000e+00 2449.0
4 TraesCS4D01G356900 chr5A 95.050 505 24 1 6768 7271 689916421 689916925 0.000000e+00 793.0
5 TraesCS4D01G356900 chr5A 83.502 297 38 9 290 579 689886265 689886557 4.320000e-67 267.0
6 TraesCS4D01G356900 chr5A 75.535 654 50 46 841 1426 689886910 689887521 3.410000e-53 220.0
7 TraesCS4D01G356900 chr5A 83.920 199 15 9 6134 6331 689891965 689892147 2.700000e-39 174.0
8 TraesCS4D01G356900 chr5A 97.619 42 1 0 6528 6569 689916048 689916089 1.010000e-08 73.1
9 TraesCS4D01G356900 chr5A 97.436 39 0 1 603 640 481924992 481924954 1.690000e-06 65.8
10 TraesCS4D01G356900 chr4B 91.700 4024 250 42 2742 6739 652281015 652284980 0.000000e+00 5504.0
11 TraesCS4D01G356900 chr4B 94.578 498 27 0 6768 7265 652288452 652288949 0.000000e+00 771.0
12 TraesCS4D01G356900 chr4B 79.448 725 59 45 844 1531 652278857 652279528 1.450000e-116 431.0
13 TraesCS4D01G356900 chr4B 80.275 436 55 19 1578 1993 652279537 652279961 4.260000e-77 300.0
14 TraesCS4D01G356900 chr4B 78.309 272 53 5 6904 7175 661185973 661186238 3.490000e-38 171.0
15 TraesCS4D01G356900 chr4B 100.000 28 0 0 607 634 649657585 649657612 1.300000e-02 52.8
16 TraesCS4D01G356900 chr2D 92.295 623 29 9 2074 2695 613465622 613465018 0.000000e+00 867.0
17 TraesCS4D01G356900 chr2D 79.144 187 35 4 79 263 2508027 2507843 7.660000e-25 126.0
18 TraesCS4D01G356900 chr5D 91.493 623 32 8 2074 2695 52585651 52585049 0.000000e+00 837.0
19 TraesCS4D01G356900 chr5D 92.308 52 3 1 603 653 448832852 448832903 1.010000e-08 73.1
20 TraesCS4D01G356900 chr3B 83.750 400 50 14 1828 2226 747741519 747741904 1.490000e-96 364.0
21 TraesCS4D01G356900 chr3B 78.333 360 70 6 6913 7271 19041225 19041577 7.340000e-55 226.0
22 TraesCS4D01G356900 chr3B 79.670 182 25 9 79 254 475253569 475253744 3.560000e-23 121.0
23 TraesCS4D01G356900 chr7A 92.701 137 10 0 2074 2210 7051319 7051183 1.600000e-46 198.0
24 TraesCS4D01G356900 chr7A 92.308 52 4 0 2644 2695 7051170 7051119 2.810000e-09 75.0
25 TraesCS4D01G356900 chr7D 83.333 192 32 0 7017 7208 112117363 112117554 2.080000e-40 178.0
26 TraesCS4D01G356900 chr7D 78.723 188 31 7 71 251 580649450 580649635 4.610000e-22 117.0
27 TraesCS4D01G356900 chr7D 78.621 145 26 3 112 254 353942370 353942511 2.790000e-14 91.6
28 TraesCS4D01G356900 chrUn 77.941 272 54 5 6904 7175 111192509 111192774 1.620000e-36 165.0
29 TraesCS4D01G356900 chrUn 77.348 181 33 7 77 253 60176058 60175882 4.640000e-17 100.0
30 TraesCS4D01G356900 chrUn 77.348 181 33 7 77 253 233395527 233395351 4.640000e-17 100.0
31 TraesCS4D01G356900 chr3A 80.347 173 26 7 77 244 708655004 708654835 2.750000e-24 124.0
32 TraesCS4D01G356900 chr3A 92.683 41 3 0 611 651 279425808 279425848 7.880000e-05 60.2
33 TraesCS4D01G356900 chr1A 79.191 173 32 4 71 240 404482266 404482095 4.610000e-22 117.0
34 TraesCS4D01G356900 chr4A 91.429 70 5 1 1586 1654 644525465 644525396 2.160000e-15 95.3
35 TraesCS4D01G356900 chr5B 97.917 48 1 0 607 654 571554461 571554508 4.670000e-12 84.2
36 TraesCS4D01G356900 chr6D 90.000 50 4 1 603 651 326575165 326575214 6.090000e-06 63.9
37 TraesCS4D01G356900 chr3D 93.023 43 3 0 609 651 175239697 175239739 6.090000e-06 63.9
38 TraesCS4D01G356900 chr7B 88.000 50 6 0 609 658 747367707 747367756 7.880000e-05 60.2
39 TraesCS4D01G356900 chr2A 89.130 46 5 0 607 652 717955053 717955098 2.830000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G356900 chr4D 505426788 505434058 7270 False 13428.000000 13428 100.000000 1 7271 1 chr4D.!!$F2 7270
1 TraesCS4D01G356900 chr5A 689886265 689892147 5882 False 1671.750000 6026 84.176250 290 6331 4 chr5A.!!$F1 6041
2 TraesCS4D01G356900 chr5A 689913428 689916925 3497 False 1105.033333 2449 92.236667 3892 7271 3 chr5A.!!$F2 3379
3 TraesCS4D01G356900 chr4B 652278857 652288949 10092 False 1751.500000 5504 86.500250 844 7265 4 chr4B.!!$F3 6421
4 TraesCS4D01G356900 chr2D 613465018 613465622 604 True 867.000000 867 92.295000 2074 2695 1 chr2D.!!$R2 621
5 TraesCS4D01G356900 chr5D 52585049 52585651 602 True 837.000000 837 91.493000 2074 2695 1 chr5D.!!$R1 621

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
60 61 0.034059 AAACACGCTGTCAGGGAGAG 59.966 55.000 22.63 13.69 31.91 3.20 F
544 550 0.035739 AAACGGGATGCGTACACCTT 59.964 50.000 0.00 0.00 0.00 3.50 F
724 739 0.100682 GTGAGCTCTGCCGACGAATA 59.899 55.000 16.19 0.00 0.00 1.75 F
1464 1747 0.110486 AAATTGTCTCTGGTGGCGGT 59.890 50.000 0.00 0.00 0.00 5.68 F
2807 3574 0.249398 ACACGGAGGAATGCAGTACC 59.751 55.000 0.00 0.00 0.00 3.34 F
3007 3774 0.254178 GGCATTGCTTCCTCCTCTGA 59.746 55.000 8.82 0.00 0.00 3.27 F
3217 3984 0.329596 AATCCTCCCTGTGACCTTGC 59.670 55.000 0.00 0.00 0.00 4.01 F
4391 5174 1.068748 CATTCCAGCAGAGCAACACAC 60.069 52.381 0.00 0.00 0.00 3.82 F
5849 6692 0.765510 GGACAGGAGGCCGGATTAAT 59.234 55.000 5.05 0.00 0.00 1.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1740 2077 0.036577 ACTGCGCTCTGAAGCTCAAT 60.037 50.000 9.73 0.0 46.91 2.57 R
1819 2161 1.000274 GTGCACCCAACATTGTTCTCC 60.000 52.381 5.22 0.0 0.00 3.71 R
2215 2567 1.204941 AGCAGGGTGTTACTAGAAGCG 59.795 52.381 0.00 0.0 0.00 4.68 R
3222 3989 0.038526 TCGCTCACCGGAGTTTTCTC 60.039 55.000 9.46 0.0 43.37 2.87 R
4343 5122 0.734889 ATTCCGAATTGCTTGCGAGG 59.265 50.000 2.37 0.0 0.00 4.63 R
4402 5185 2.489938 TGTCTTGAACATACTGGGGC 57.510 50.000 0.00 0.0 31.20 5.80 R
5033 5833 1.032014 TGCAGTTCTTCAAACAGGCC 58.968 50.000 0.00 0.0 0.00 5.19 R
5941 6807 0.251832 TCTGTGGAGGAGGACAGGTC 60.252 60.000 0.00 0.0 40.11 3.85 R
6785 11236 0.734889 GGACGCCATCTCCAATTGTG 59.265 55.000 4.43 0.0 0.00 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.367945 TTCCCACATGTAAACTATCTCCC 57.632 43.478 0.00 0.00 0.00 4.30
25 26 4.631234 TCCCACATGTAAACTATCTCCCT 58.369 43.478 0.00 0.00 0.00 4.20
26 27 5.036916 TCCCACATGTAAACTATCTCCCTT 58.963 41.667 0.00 0.00 0.00 3.95
27 28 5.491078 TCCCACATGTAAACTATCTCCCTTT 59.509 40.000 0.00 0.00 0.00 3.11
28 29 5.590259 CCCACATGTAAACTATCTCCCTTTG 59.410 44.000 0.00 0.00 0.00 2.77
29 30 5.066505 CCACATGTAAACTATCTCCCTTTGC 59.933 44.000 0.00 0.00 0.00 3.68
30 31 5.066505 CACATGTAAACTATCTCCCTTTGCC 59.933 44.000 0.00 0.00 0.00 4.52
31 32 4.230745 TGTAAACTATCTCCCTTTGCCC 57.769 45.455 0.00 0.00 0.00 5.36
32 33 3.589735 TGTAAACTATCTCCCTTTGCCCA 59.410 43.478 0.00 0.00 0.00 5.36
33 34 4.229582 TGTAAACTATCTCCCTTTGCCCAT 59.770 41.667 0.00 0.00 0.00 4.00
34 35 4.337264 AAACTATCTCCCTTTGCCCATT 57.663 40.909 0.00 0.00 0.00 3.16
35 36 3.303351 ACTATCTCCCTTTGCCCATTG 57.697 47.619 0.00 0.00 0.00 2.82
36 37 2.582636 ACTATCTCCCTTTGCCCATTGT 59.417 45.455 0.00 0.00 0.00 2.71
37 38 3.785887 ACTATCTCCCTTTGCCCATTGTA 59.214 43.478 0.00 0.00 0.00 2.41
38 39 2.806945 TCTCCCTTTGCCCATTGTAG 57.193 50.000 0.00 0.00 0.00 2.74
39 40 1.106285 CTCCCTTTGCCCATTGTAGC 58.894 55.000 0.00 0.00 0.00 3.58
40 41 0.324275 TCCCTTTGCCCATTGTAGCC 60.324 55.000 0.00 0.00 0.00 3.93
41 42 0.614415 CCCTTTGCCCATTGTAGCCA 60.614 55.000 0.00 0.00 0.00 4.75
42 43 1.265236 CCTTTGCCCATTGTAGCCAA 58.735 50.000 0.00 0.00 34.45 4.52
43 44 1.622811 CCTTTGCCCATTGTAGCCAAA 59.377 47.619 0.00 0.00 33.44 3.28
44 45 2.612721 CCTTTGCCCATTGTAGCCAAAC 60.613 50.000 0.00 0.00 33.44 2.93
45 46 1.709578 TTGCCCATTGTAGCCAAACA 58.290 45.000 0.00 0.00 33.44 2.83
46 47 0.965439 TGCCCATTGTAGCCAAACAC 59.035 50.000 0.00 0.00 33.44 3.32
47 48 0.109319 GCCCATTGTAGCCAAACACG 60.109 55.000 0.00 0.00 33.44 4.49
48 49 0.109319 CCCATTGTAGCCAAACACGC 60.109 55.000 0.00 0.00 33.44 5.34
49 50 0.881118 CCATTGTAGCCAAACACGCT 59.119 50.000 0.00 0.00 40.45 5.07
50 51 1.401409 CCATTGTAGCCAAACACGCTG 60.401 52.381 0.00 0.00 37.12 5.18
51 52 1.266718 CATTGTAGCCAAACACGCTGT 59.733 47.619 0.00 0.00 37.12 4.40
52 53 0.941542 TTGTAGCCAAACACGCTGTC 59.058 50.000 0.00 0.00 37.12 3.51
53 54 0.179070 TGTAGCCAAACACGCTGTCA 60.179 50.000 0.00 0.00 37.12 3.58
54 55 0.512952 GTAGCCAAACACGCTGTCAG 59.487 55.000 0.00 0.00 37.12 3.51
55 56 0.602638 TAGCCAAACACGCTGTCAGG 60.603 55.000 1.14 0.00 37.12 3.86
56 57 2.908073 GCCAAACACGCTGTCAGGG 61.908 63.158 14.97 14.97 0.00 4.45
57 58 1.227823 CCAAACACGCTGTCAGGGA 60.228 57.895 22.63 0.00 31.91 4.20
58 59 1.230635 CCAAACACGCTGTCAGGGAG 61.231 60.000 22.63 17.04 31.91 4.30
59 60 0.249868 CAAACACGCTGTCAGGGAGA 60.250 55.000 22.63 0.00 31.91 3.71
60 61 0.034059 AAACACGCTGTCAGGGAGAG 59.966 55.000 22.63 13.69 31.91 3.20
61 62 0.827925 AACACGCTGTCAGGGAGAGA 60.828 55.000 22.63 0.00 31.91 3.10
62 63 1.247419 ACACGCTGTCAGGGAGAGAG 61.247 60.000 22.63 9.42 40.47 3.20
63 64 0.962855 CACGCTGTCAGGGAGAGAGA 60.963 60.000 22.63 0.00 39.94 3.10
64 65 0.251386 ACGCTGTCAGGGAGAGAGAA 60.251 55.000 22.63 0.00 39.94 2.87
65 66 0.891373 CGCTGTCAGGGAGAGAGAAA 59.109 55.000 11.37 0.00 39.94 2.52
66 67 1.135141 CGCTGTCAGGGAGAGAGAAAG 60.135 57.143 11.37 0.00 39.94 2.62
67 68 2.175202 GCTGTCAGGGAGAGAGAAAGA 58.825 52.381 1.14 0.00 39.94 2.52
68 69 2.166254 GCTGTCAGGGAGAGAGAAAGAG 59.834 54.545 1.14 0.00 39.94 2.85
69 70 3.696045 CTGTCAGGGAGAGAGAAAGAGA 58.304 50.000 0.00 0.00 39.94 3.10
70 71 4.280819 CTGTCAGGGAGAGAGAAAGAGAT 58.719 47.826 0.00 0.00 39.94 2.75
71 72 5.445069 CTGTCAGGGAGAGAGAAAGAGATA 58.555 45.833 0.00 0.00 39.94 1.98
72 73 5.445069 TGTCAGGGAGAGAGAAAGAGATAG 58.555 45.833 0.00 0.00 0.00 2.08
73 74 5.192722 TGTCAGGGAGAGAGAAAGAGATAGA 59.807 44.000 0.00 0.00 0.00 1.98
74 75 6.126215 TGTCAGGGAGAGAGAAAGAGATAGAT 60.126 42.308 0.00 0.00 0.00 1.98
75 76 7.073088 TGTCAGGGAGAGAGAAAGAGATAGATA 59.927 40.741 0.00 0.00 0.00 1.98
76 77 7.607991 GTCAGGGAGAGAGAAAGAGATAGATAG 59.392 44.444 0.00 0.00 0.00 2.08
77 78 6.886459 CAGGGAGAGAGAAAGAGATAGATAGG 59.114 46.154 0.00 0.00 0.00 2.57
78 79 6.011628 AGGGAGAGAGAAAGAGATAGATAGGG 60.012 46.154 0.00 0.00 0.00 3.53
79 80 6.240468 GGGAGAGAGAAAGAGATAGATAGGGT 60.240 46.154 0.00 0.00 0.00 4.34
80 81 6.659242 GGAGAGAGAAAGAGATAGATAGGGTG 59.341 46.154 0.00 0.00 0.00 4.61
81 82 7.161715 AGAGAGAAAGAGATAGATAGGGTGT 57.838 40.000 0.00 0.00 0.00 4.16
82 83 7.591821 AGAGAGAAAGAGATAGATAGGGTGTT 58.408 38.462 0.00 0.00 0.00 3.32
83 84 8.065007 AGAGAGAAAGAGATAGATAGGGTGTTT 58.935 37.037 0.00 0.00 0.00 2.83
84 85 9.357161 GAGAGAAAGAGATAGATAGGGTGTTTA 57.643 37.037 0.00 0.00 0.00 2.01
85 86 9.362151 AGAGAAAGAGATAGATAGGGTGTTTAG 57.638 37.037 0.00 0.00 0.00 1.85
86 87 9.138596 GAGAAAGAGATAGATAGGGTGTTTAGT 57.861 37.037 0.00 0.00 0.00 2.24
87 88 9.495382 AGAAAGAGATAGATAGGGTGTTTAGTT 57.505 33.333 0.00 0.00 0.00 2.24
93 94 8.804204 AGATAGATAGGGTGTTTAGTTATTCCG 58.196 37.037 0.00 0.00 0.00 4.30
94 95 6.170846 AGATAGGGTGTTTAGTTATTCCGG 57.829 41.667 0.00 0.00 0.00 5.14
95 96 5.664457 AGATAGGGTGTTTAGTTATTCCGGT 59.336 40.000 0.00 0.00 0.00 5.28
96 97 3.946606 AGGGTGTTTAGTTATTCCGGTG 58.053 45.455 0.00 0.00 0.00 4.94
97 98 2.421073 GGGTGTTTAGTTATTCCGGTGC 59.579 50.000 0.00 0.00 0.00 5.01
98 99 3.340928 GGTGTTTAGTTATTCCGGTGCT 58.659 45.455 0.00 0.00 0.00 4.40
99 100 3.754850 GGTGTTTAGTTATTCCGGTGCTT 59.245 43.478 0.00 0.00 0.00 3.91
100 101 4.379082 GGTGTTTAGTTATTCCGGTGCTTG 60.379 45.833 0.00 0.00 0.00 4.01
101 102 4.214758 GTGTTTAGTTATTCCGGTGCTTGT 59.785 41.667 0.00 0.00 0.00 3.16
102 103 4.822896 TGTTTAGTTATTCCGGTGCTTGTT 59.177 37.500 0.00 0.00 0.00 2.83
103 104 5.151389 GTTTAGTTATTCCGGTGCTTGTTG 58.849 41.667 0.00 0.00 0.00 3.33
104 105 1.539827 AGTTATTCCGGTGCTTGTTGC 59.460 47.619 0.00 0.00 43.25 4.17
105 106 0.885196 TTATTCCGGTGCTTGTTGCC 59.115 50.000 0.00 0.00 42.00 4.52
106 107 1.302383 TATTCCGGTGCTTGTTGCCG 61.302 55.000 0.00 0.00 44.55 5.69
109 110 2.666862 CGGTGCTTGTTGCCGGTA 60.667 61.111 1.90 0.00 41.60 4.02
110 111 2.677003 CGGTGCTTGTTGCCGGTAG 61.677 63.158 1.90 0.00 41.60 3.18
111 112 2.561373 GTGCTTGTTGCCGGTAGC 59.439 61.111 1.90 0.00 42.00 3.58
139 140 2.772189 GCGTTCTGCGTGTGCTAG 59.228 61.111 0.00 0.00 43.34 3.42
140 141 2.730672 GCGTTCTGCGTGTGCTAGG 61.731 63.158 0.00 0.00 43.34 3.02
141 142 1.372997 CGTTCTGCGTGTGCTAGGT 60.373 57.895 0.00 0.00 43.34 3.08
142 143 0.944311 CGTTCTGCGTGTGCTAGGTT 60.944 55.000 0.00 0.00 43.34 3.50
143 144 1.226746 GTTCTGCGTGTGCTAGGTTT 58.773 50.000 0.00 0.00 43.34 3.27
144 145 1.602377 GTTCTGCGTGTGCTAGGTTTT 59.398 47.619 0.00 0.00 43.34 2.43
145 146 1.961793 TCTGCGTGTGCTAGGTTTTT 58.038 45.000 0.00 0.00 43.34 1.94
146 147 1.871039 TCTGCGTGTGCTAGGTTTTTC 59.129 47.619 0.00 0.00 43.34 2.29
147 148 1.601903 CTGCGTGTGCTAGGTTTTTCA 59.398 47.619 0.00 0.00 43.34 2.69
148 149 1.601903 TGCGTGTGCTAGGTTTTTCAG 59.398 47.619 0.00 0.00 43.34 3.02
149 150 1.069227 GCGTGTGCTAGGTTTTTCAGG 60.069 52.381 0.00 0.00 38.39 3.86
150 151 2.489971 CGTGTGCTAGGTTTTTCAGGA 58.510 47.619 0.00 0.00 0.00 3.86
151 152 3.074412 CGTGTGCTAGGTTTTTCAGGAT 58.926 45.455 0.00 0.00 0.00 3.24
152 153 3.125316 CGTGTGCTAGGTTTTTCAGGATC 59.875 47.826 0.00 0.00 0.00 3.36
153 154 4.072131 GTGTGCTAGGTTTTTCAGGATCA 58.928 43.478 0.00 0.00 0.00 2.92
154 155 4.518970 GTGTGCTAGGTTTTTCAGGATCAA 59.481 41.667 0.00 0.00 0.00 2.57
155 156 4.518970 TGTGCTAGGTTTTTCAGGATCAAC 59.481 41.667 0.00 0.00 0.00 3.18
156 157 4.762251 GTGCTAGGTTTTTCAGGATCAACT 59.238 41.667 0.00 0.00 0.00 3.16
157 158 5.241728 GTGCTAGGTTTTTCAGGATCAACTT 59.758 40.000 0.00 0.00 0.00 2.66
158 159 5.833131 TGCTAGGTTTTTCAGGATCAACTTT 59.167 36.000 0.00 0.00 0.00 2.66
159 160 6.152379 GCTAGGTTTTTCAGGATCAACTTTG 58.848 40.000 0.00 0.00 0.00 2.77
160 161 6.239036 GCTAGGTTTTTCAGGATCAACTTTGT 60.239 38.462 0.00 0.00 0.00 2.83
161 162 7.040686 GCTAGGTTTTTCAGGATCAACTTTGTA 60.041 37.037 0.00 0.00 0.00 2.41
162 163 7.654022 AGGTTTTTCAGGATCAACTTTGTAA 57.346 32.000 0.00 0.00 0.00 2.41
163 164 7.716612 AGGTTTTTCAGGATCAACTTTGTAAG 58.283 34.615 0.00 0.00 0.00 2.34
164 165 6.923508 GGTTTTTCAGGATCAACTTTGTAAGG 59.076 38.462 0.00 0.00 0.00 2.69
165 166 6.648879 TTTTCAGGATCAACTTTGTAAGGG 57.351 37.500 0.00 0.00 0.00 3.95
166 167 4.301072 TCAGGATCAACTTTGTAAGGGG 57.699 45.455 0.00 0.00 0.00 4.79
167 168 3.010138 TCAGGATCAACTTTGTAAGGGGG 59.990 47.826 0.00 0.00 0.00 5.40
168 169 2.100197 GGATCAACTTTGTAAGGGGGC 58.900 52.381 0.00 0.00 0.00 5.80
169 170 2.291605 GGATCAACTTTGTAAGGGGGCT 60.292 50.000 0.00 0.00 0.00 5.19
170 171 3.053917 GGATCAACTTTGTAAGGGGGCTA 60.054 47.826 0.00 0.00 0.00 3.93
171 172 3.428413 TCAACTTTGTAAGGGGGCTAC 57.572 47.619 0.00 0.00 0.00 3.58
172 173 2.040679 TCAACTTTGTAAGGGGGCTACC 59.959 50.000 0.00 0.00 39.11 3.18
173 174 2.041216 CAACTTTGTAAGGGGGCTACCT 59.959 50.000 0.00 0.00 44.56 3.08
174 175 1.914108 ACTTTGTAAGGGGGCTACCTC 59.086 52.381 1.89 0.00 40.87 3.85
175 176 1.913419 CTTTGTAAGGGGGCTACCTCA 59.087 52.381 1.89 0.00 40.96 3.86
176 177 1.282382 TTGTAAGGGGGCTACCTCAC 58.718 55.000 1.89 0.00 40.96 3.51
177 178 0.619543 TGTAAGGGGGCTACCTCACC 60.620 60.000 1.89 0.00 40.96 4.02
178 179 0.619543 GTAAGGGGGCTACCTCACCA 60.620 60.000 1.89 0.00 40.96 4.17
179 180 0.619543 TAAGGGGGCTACCTCACCAC 60.620 60.000 1.89 0.00 40.96 4.16
180 181 3.408853 GGGGGCTACCTCACCACC 61.409 72.222 0.00 0.00 43.89 4.61
181 182 2.285442 GGGGCTACCTCACCACCT 60.285 66.667 0.00 0.00 36.80 4.00
182 183 1.923909 GGGGCTACCTCACCACCTT 60.924 63.158 0.00 0.00 36.80 3.50
183 184 1.299976 GGGCTACCTCACCACCTTG 59.700 63.158 0.00 0.00 0.00 3.61
184 185 1.489560 GGGCTACCTCACCACCTTGT 61.490 60.000 0.00 0.00 0.00 3.16
185 186 1.272807 GGCTACCTCACCACCTTGTA 58.727 55.000 0.00 0.00 0.00 2.41
186 187 1.838077 GGCTACCTCACCACCTTGTAT 59.162 52.381 0.00 0.00 0.00 2.29
187 188 2.158943 GGCTACCTCACCACCTTGTATC 60.159 54.545 0.00 0.00 0.00 2.24
188 189 2.158943 GCTACCTCACCACCTTGTATCC 60.159 54.545 0.00 0.00 0.00 2.59
189 190 2.344093 ACCTCACCACCTTGTATCCT 57.656 50.000 0.00 0.00 0.00 3.24
190 191 2.632537 ACCTCACCACCTTGTATCCTT 58.367 47.619 0.00 0.00 0.00 3.36
191 192 2.572104 ACCTCACCACCTTGTATCCTTC 59.428 50.000 0.00 0.00 0.00 3.46
192 193 2.418746 CCTCACCACCTTGTATCCTTCG 60.419 54.545 0.00 0.00 0.00 3.79
193 194 1.066430 TCACCACCTTGTATCCTTCGC 60.066 52.381 0.00 0.00 0.00 4.70
194 195 0.252197 ACCACCTTGTATCCTTCGCC 59.748 55.000 0.00 0.00 0.00 5.54
195 196 0.463833 CCACCTTGTATCCTTCGCCC 60.464 60.000 0.00 0.00 0.00 6.13
196 197 0.810031 CACCTTGTATCCTTCGCCCG 60.810 60.000 0.00 0.00 0.00 6.13
197 198 1.262640 ACCTTGTATCCTTCGCCCGT 61.263 55.000 0.00 0.00 0.00 5.28
198 199 0.748450 CCTTGTATCCTTCGCCCGTA 59.252 55.000 0.00 0.00 0.00 4.02
199 200 1.343465 CCTTGTATCCTTCGCCCGTAT 59.657 52.381 0.00 0.00 0.00 3.06
200 201 2.559668 CCTTGTATCCTTCGCCCGTATA 59.440 50.000 0.00 0.00 0.00 1.47
201 202 3.572584 CTTGTATCCTTCGCCCGTATAC 58.427 50.000 0.00 0.00 0.00 1.47
202 203 2.867624 TGTATCCTTCGCCCGTATACT 58.132 47.619 0.56 0.00 0.00 2.12
203 204 2.816087 TGTATCCTTCGCCCGTATACTC 59.184 50.000 0.56 0.00 0.00 2.59
204 205 2.289592 ATCCTTCGCCCGTATACTCT 57.710 50.000 0.56 0.00 0.00 3.24
205 206 2.062971 TCCTTCGCCCGTATACTCTT 57.937 50.000 0.56 0.00 0.00 2.85
206 207 2.381911 TCCTTCGCCCGTATACTCTTT 58.618 47.619 0.56 0.00 0.00 2.52
207 208 2.762327 TCCTTCGCCCGTATACTCTTTT 59.238 45.455 0.56 0.00 0.00 2.27
208 209 3.953612 TCCTTCGCCCGTATACTCTTTTA 59.046 43.478 0.56 0.00 0.00 1.52
209 210 4.037208 TCCTTCGCCCGTATACTCTTTTAG 59.963 45.833 0.56 0.00 0.00 1.85
210 211 3.360249 TCGCCCGTATACTCTTTTAGC 57.640 47.619 0.56 0.00 0.00 3.09
211 212 2.954318 TCGCCCGTATACTCTTTTAGCT 59.046 45.455 0.56 0.00 0.00 3.32
212 213 3.050619 CGCCCGTATACTCTTTTAGCTG 58.949 50.000 0.00 0.00 0.00 4.24
213 214 3.490419 CGCCCGTATACTCTTTTAGCTGT 60.490 47.826 0.00 0.00 0.00 4.40
214 215 4.439968 GCCCGTATACTCTTTTAGCTGTT 58.560 43.478 0.00 0.00 0.00 3.16
215 216 4.270325 GCCCGTATACTCTTTTAGCTGTTG 59.730 45.833 0.00 0.00 0.00 3.33
216 217 4.270325 CCCGTATACTCTTTTAGCTGTTGC 59.730 45.833 0.00 0.00 40.05 4.17
238 239 5.427036 CTTTATTTATAAAGCGGGGCGAA 57.573 39.130 8.78 0.00 41.69 4.70
239 240 5.823353 CTTTATTTATAAAGCGGGGCGAAA 58.177 37.500 8.78 0.00 41.69 3.46
240 241 3.982576 ATTTATAAAGCGGGGCGAAAG 57.017 42.857 3.94 0.00 0.00 2.62
258 259 5.090083 CGAAAGCCTATATCGAGAGTAAGC 58.910 45.833 0.00 0.00 38.82 3.09
259 260 5.334957 CGAAAGCCTATATCGAGAGTAAGCA 60.335 44.000 0.00 0.00 38.82 3.91
260 261 5.379732 AAGCCTATATCGAGAGTAAGCAC 57.620 43.478 0.00 0.00 0.00 4.40
261 262 4.399219 AGCCTATATCGAGAGTAAGCACA 58.601 43.478 0.00 0.00 0.00 4.57
262 263 4.827835 AGCCTATATCGAGAGTAAGCACAA 59.172 41.667 0.00 0.00 0.00 3.33
263 264 5.478679 AGCCTATATCGAGAGTAAGCACAAT 59.521 40.000 0.00 0.00 0.00 2.71
264 265 5.802956 GCCTATATCGAGAGTAAGCACAATC 59.197 44.000 0.00 0.00 0.00 2.67
265 266 6.570571 GCCTATATCGAGAGTAAGCACAATCA 60.571 42.308 0.00 0.00 0.00 2.57
266 267 7.371159 CCTATATCGAGAGTAAGCACAATCAA 58.629 38.462 0.00 0.00 0.00 2.57
267 268 7.540400 CCTATATCGAGAGTAAGCACAATCAAG 59.460 40.741 0.00 0.00 0.00 3.02
268 269 3.849911 TCGAGAGTAAGCACAATCAAGG 58.150 45.455 0.00 0.00 0.00 3.61
269 270 3.258372 TCGAGAGTAAGCACAATCAAGGT 59.742 43.478 0.00 0.00 0.00 3.50
270 271 3.369147 CGAGAGTAAGCACAATCAAGGTG 59.631 47.826 0.00 0.00 39.25 4.00
277 278 2.880822 CACAATCAAGGTGCACGTAG 57.119 50.000 13.22 3.52 0.00 3.51
279 280 2.548057 CACAATCAAGGTGCACGTAGTT 59.452 45.455 13.22 5.42 41.61 2.24
280 281 3.743911 CACAATCAAGGTGCACGTAGTTA 59.256 43.478 13.22 0.00 41.61 2.24
281 282 3.994392 ACAATCAAGGTGCACGTAGTTAG 59.006 43.478 13.22 6.12 41.61 2.34
282 283 4.242475 CAATCAAGGTGCACGTAGTTAGA 58.758 43.478 13.22 6.73 41.61 2.10
283 284 3.570926 TCAAGGTGCACGTAGTTAGAG 57.429 47.619 13.22 0.00 41.61 2.43
284 285 3.151554 TCAAGGTGCACGTAGTTAGAGA 58.848 45.455 13.22 0.41 41.61 3.10
285 286 3.570975 TCAAGGTGCACGTAGTTAGAGAA 59.429 43.478 13.22 0.00 41.61 2.87
286 287 3.851976 AGGTGCACGTAGTTAGAGAAG 57.148 47.619 10.95 0.00 41.61 2.85
287 288 2.094649 AGGTGCACGTAGTTAGAGAAGC 60.095 50.000 10.95 0.00 41.61 3.86
288 289 2.352421 GGTGCACGTAGTTAGAGAAGCA 60.352 50.000 11.45 0.00 41.61 3.91
289 290 3.314553 GTGCACGTAGTTAGAGAAGCAA 58.685 45.455 0.00 0.00 41.61 3.91
290 291 3.739300 GTGCACGTAGTTAGAGAAGCAAA 59.261 43.478 0.00 0.00 41.61 3.68
291 292 4.389077 GTGCACGTAGTTAGAGAAGCAAAT 59.611 41.667 0.00 0.00 41.61 2.32
292 293 5.575606 GTGCACGTAGTTAGAGAAGCAAATA 59.424 40.000 0.00 0.00 41.61 1.40
293 294 6.255887 GTGCACGTAGTTAGAGAAGCAAATAT 59.744 38.462 0.00 0.00 41.61 1.28
294 295 7.434307 GTGCACGTAGTTAGAGAAGCAAATATA 59.566 37.037 0.00 0.00 41.61 0.86
295 296 7.648112 TGCACGTAGTTAGAGAAGCAAATATAG 59.352 37.037 0.00 0.00 41.61 1.31
296 297 7.861372 GCACGTAGTTAGAGAAGCAAATATAGA 59.139 37.037 0.00 0.00 41.61 1.98
297 298 9.900710 CACGTAGTTAGAGAAGCAAATATAGAT 57.099 33.333 0.00 0.00 41.61 1.98
317 318 3.147294 CGTGAGCCGTCGTTTCTG 58.853 61.111 0.00 0.00 0.00 3.02
321 322 1.289380 GAGCCGTCGTTTCTGAGGT 59.711 57.895 0.00 0.00 0.00 3.85
341 342 1.155889 TTGATTGGCGTGCACTGTAG 58.844 50.000 16.19 0.00 0.00 2.74
342 343 1.298157 TGATTGGCGTGCACTGTAGC 61.298 55.000 16.19 10.63 0.00 3.58
343 344 1.003355 ATTGGCGTGCACTGTAGCT 60.003 52.632 16.19 0.00 34.99 3.32
344 345 0.249120 ATTGGCGTGCACTGTAGCTA 59.751 50.000 16.19 5.81 34.99 3.32
345 346 0.669318 TTGGCGTGCACTGTAGCTAC 60.669 55.000 17.30 17.30 34.99 3.58
352 354 1.536766 TGCACTGTAGCTACGTACGTT 59.463 47.619 27.92 11.51 34.99 3.99
384 386 1.799403 CTACGTACTCCATCGATCGCT 59.201 52.381 11.09 0.00 0.00 4.93
385 387 1.875009 ACGTACTCCATCGATCGCTA 58.125 50.000 11.09 0.00 0.00 4.26
386 388 1.799403 ACGTACTCCATCGATCGCTAG 59.201 52.381 11.09 7.22 0.00 3.42
388 390 1.135632 GTACTCCATCGATCGCTAGCC 60.136 57.143 11.09 0.00 0.00 3.93
391 393 1.373497 CCATCGATCGCTAGCCCAC 60.373 63.158 11.09 0.00 0.00 4.61
392 394 1.363807 CATCGATCGCTAGCCCACA 59.636 57.895 11.09 0.00 0.00 4.17
395 397 1.153647 CGATCGCTAGCCCACAACA 60.154 57.895 9.66 0.00 0.00 3.33
396 398 1.421410 CGATCGCTAGCCCACAACAC 61.421 60.000 9.66 0.00 0.00 3.32
397 399 1.421410 GATCGCTAGCCCACAACACG 61.421 60.000 9.66 0.00 0.00 4.49
398 400 1.884075 ATCGCTAGCCCACAACACGA 61.884 55.000 9.66 0.00 0.00 4.35
424 426 2.484558 ATGCACGCATGATGAGCAA 58.515 47.368 12.81 0.53 38.85 3.91
426 428 0.597072 TGCACGCATGATGAGCAAAA 59.403 45.000 0.00 0.00 31.42 2.44
429 431 2.663808 CACGCATGATGAGCAAAACAA 58.336 42.857 0.00 0.00 0.00 2.83
443 445 8.292444 TGAGCAAAACAAGGCAAGTATATAAT 57.708 30.769 0.00 0.00 0.00 1.28
483 485 1.067213 TGCATGCTTACTGCTCACGTA 60.067 47.619 20.33 0.00 43.37 3.57
492 495 3.992260 ACTGCTCACGTATATCCTGTC 57.008 47.619 0.00 0.00 0.00 3.51
502 505 3.887110 CGTATATCCTGTCCCTGTGTGTA 59.113 47.826 0.00 0.00 0.00 2.90
503 506 4.023107 CGTATATCCTGTCCCTGTGTGTAG 60.023 50.000 0.00 0.00 0.00 2.74
504 507 0.905357 ATCCTGTCCCTGTGTGTAGC 59.095 55.000 0.00 0.00 0.00 3.58
505 508 0.471022 TCCTGTCCCTGTGTGTAGCA 60.471 55.000 0.00 0.00 0.00 3.49
540 546 4.602159 GGAAACGGGATGCGTACA 57.398 55.556 0.00 0.00 0.00 2.90
541 547 2.084013 GGAAACGGGATGCGTACAC 58.916 57.895 0.00 0.00 0.00 2.90
542 548 1.363885 GGAAACGGGATGCGTACACC 61.364 60.000 0.00 0.00 0.00 4.16
544 550 0.035739 AAACGGGATGCGTACACCTT 59.964 50.000 0.00 0.00 0.00 3.50
580 586 9.934190 AATGATGTTTTTGTTAACTCAAAATGC 57.066 25.926 15.14 8.41 43.60 3.56
581 587 7.914465 TGATGTTTTTGTTAACTCAAAATGCC 58.086 30.769 15.14 9.92 43.60 4.40
584 590 3.717400 TTGTTAACTCAAAATGCCGCA 57.283 38.095 7.22 0.00 0.00 5.69
585 591 3.717400 TGTTAACTCAAAATGCCGCAA 57.283 38.095 7.22 0.00 0.00 4.85
586 592 4.250116 TGTTAACTCAAAATGCCGCAAT 57.750 36.364 7.22 0.00 0.00 3.56
587 593 5.378292 TGTTAACTCAAAATGCCGCAATA 57.622 34.783 7.22 0.00 0.00 1.90
588 594 5.773575 TGTTAACTCAAAATGCCGCAATAA 58.226 33.333 7.22 0.00 0.00 1.40
589 595 5.861251 TGTTAACTCAAAATGCCGCAATAAG 59.139 36.000 7.22 0.00 0.00 1.73
590 596 4.519540 AACTCAAAATGCCGCAATAAGT 57.480 36.364 0.00 0.00 0.00 2.24
591 597 5.637006 AACTCAAAATGCCGCAATAAGTA 57.363 34.783 0.00 0.00 0.00 2.24
592 598 5.835113 ACTCAAAATGCCGCAATAAGTAT 57.165 34.783 0.00 0.00 0.00 2.12
593 599 6.935741 ACTCAAAATGCCGCAATAAGTATA 57.064 33.333 0.00 0.00 0.00 1.47
594 600 7.510549 ACTCAAAATGCCGCAATAAGTATAT 57.489 32.000 0.00 0.00 0.00 0.86
595 601 7.362662 ACTCAAAATGCCGCAATAAGTATATG 58.637 34.615 0.00 0.00 0.00 1.78
596 602 6.148948 TCAAAATGCCGCAATAAGTATATGC 58.851 36.000 0.00 0.00 0.00 3.14
597 603 4.340894 AATGCCGCAATAAGTATATGCG 57.659 40.909 11.98 11.98 46.83 4.73
598 604 1.463056 TGCCGCAATAAGTATATGCGC 59.537 47.619 13.32 0.00 46.06 6.09
599 605 1.732259 GCCGCAATAAGTATATGCGCT 59.268 47.619 9.73 0.00 46.06 5.92
600 606 2.222819 GCCGCAATAAGTATATGCGCTC 60.223 50.000 9.73 4.38 46.06 5.03
601 607 3.254060 CCGCAATAAGTATATGCGCTCT 58.746 45.455 9.73 0.00 46.06 4.09
602 608 3.679980 CCGCAATAAGTATATGCGCTCTT 59.320 43.478 9.73 8.11 46.06 2.85
603 609 4.201628 CCGCAATAAGTATATGCGCTCTTC 60.202 45.833 9.73 0.00 46.06 2.87
604 610 4.385748 CGCAATAAGTATATGCGCTCTTCA 59.614 41.667 9.73 0.00 41.94 3.02
605 611 5.612865 GCAATAAGTATATGCGCTCTTCAC 58.387 41.667 9.73 0.00 0.00 3.18
606 612 5.177511 GCAATAAGTATATGCGCTCTTCACA 59.822 40.000 9.73 0.00 0.00 3.58
607 613 6.292865 GCAATAAGTATATGCGCTCTTCACAA 60.293 38.462 9.73 0.00 0.00 3.33
608 614 7.630026 CAATAAGTATATGCGCTCTTCACAAA 58.370 34.615 9.73 0.00 0.00 2.83
609 615 5.725110 AAGTATATGCGCTCTTCACAAAG 57.275 39.130 9.73 0.00 0.00 2.77
610 616 4.759782 AGTATATGCGCTCTTCACAAAGT 58.240 39.130 9.73 0.00 33.95 2.66
611 617 5.902681 AGTATATGCGCTCTTCACAAAGTA 58.097 37.500 9.73 0.00 33.95 2.24
612 618 5.980116 AGTATATGCGCTCTTCACAAAGTAG 59.020 40.000 9.73 0.00 33.95 2.57
613 619 2.526304 TGCGCTCTTCACAAAGTAGT 57.474 45.000 9.73 0.00 33.95 2.73
614 620 2.135139 TGCGCTCTTCACAAAGTAGTG 58.865 47.619 9.73 0.00 40.85 2.74
615 621 2.223947 TGCGCTCTTCACAAAGTAGTGA 60.224 45.455 9.73 0.00 46.12 3.41
616 622 2.996621 GCGCTCTTCACAAAGTAGTGAT 59.003 45.455 0.00 0.00 46.90 3.06
617 623 3.061429 GCGCTCTTCACAAAGTAGTGATC 59.939 47.826 0.00 0.00 46.90 2.92
618 624 4.489810 CGCTCTTCACAAAGTAGTGATCT 58.510 43.478 0.00 0.00 46.90 2.75
619 625 5.641709 CGCTCTTCACAAAGTAGTGATCTA 58.358 41.667 0.00 0.00 46.90 1.98
620 626 6.093404 CGCTCTTCACAAAGTAGTGATCTAA 58.907 40.000 0.00 0.00 46.90 2.10
621 627 6.586463 CGCTCTTCACAAAGTAGTGATCTAAA 59.414 38.462 0.00 0.00 46.90 1.85
622 628 7.410942 CGCTCTTCACAAAGTAGTGATCTAAAC 60.411 40.741 0.00 0.00 46.90 2.01
623 629 7.385205 GCTCTTCACAAAGTAGTGATCTAAACA 59.615 37.037 0.00 0.00 46.90 2.83
624 630 9.429359 CTCTTCACAAAGTAGTGATCTAAACAT 57.571 33.333 0.00 0.00 46.90 2.71
625 631 9.778741 TCTTCACAAAGTAGTGATCTAAACATT 57.221 29.630 0.00 0.00 46.90 2.71
656 662 7.448748 TTTCTTTATGAAGGGAGTACAAAGC 57.551 36.000 0.00 0.00 35.89 3.51
658 664 6.173339 TCTTTATGAAGGGAGTACAAAGCAG 58.827 40.000 0.00 0.00 33.56 4.24
664 670 2.912956 AGGGAGTACAAAGCAGGATGAA 59.087 45.455 0.00 0.00 39.69 2.57
665 671 3.010420 GGGAGTACAAAGCAGGATGAAC 58.990 50.000 0.00 0.00 39.69 3.18
669 675 1.135315 CAAAGCAGGATGAACGGCG 59.865 57.895 4.80 4.80 39.69 6.46
671 677 1.577328 AAAGCAGGATGAACGGCGTG 61.577 55.000 15.70 0.00 39.69 5.34
672 678 3.499737 GCAGGATGAACGGCGTGG 61.500 66.667 15.70 0.00 39.69 4.94
685 691 3.039134 CGTGGAGCCAACCCAAAC 58.961 61.111 0.00 0.00 35.12 2.93
686 692 1.826054 CGTGGAGCCAACCCAAACA 60.826 57.895 0.00 0.00 35.12 2.83
688 694 1.047801 GTGGAGCCAACCCAAACAAT 58.952 50.000 0.00 0.00 35.12 2.71
689 695 1.000843 GTGGAGCCAACCCAAACAATC 59.999 52.381 0.00 0.00 35.12 2.67
690 696 0.608130 GGAGCCAACCCAAACAATCC 59.392 55.000 0.00 0.00 0.00 3.01
691 697 0.243636 GAGCCAACCCAAACAATCCG 59.756 55.000 0.00 0.00 0.00 4.18
694 709 0.239879 CCAACCCAAACAATCCGACG 59.760 55.000 0.00 0.00 0.00 5.12
701 716 3.499157 CCCAAACAATCCGACGAGTAAAA 59.501 43.478 0.00 0.00 0.00 1.52
717 732 1.941812 AAAAACGTGAGCTCTGCCG 59.058 52.632 16.19 16.07 0.00 5.69
719 734 1.222115 AAAACGTGAGCTCTGCCGAC 61.222 55.000 21.85 9.05 0.00 4.79
721 736 4.103103 CGTGAGCTCTGCCGACGA 62.103 66.667 16.19 0.00 31.71 4.20
722 737 2.258591 GTGAGCTCTGCCGACGAA 59.741 61.111 16.19 0.00 0.00 3.85
723 738 1.153745 GTGAGCTCTGCCGACGAAT 60.154 57.895 16.19 0.00 0.00 3.34
724 739 0.100682 GTGAGCTCTGCCGACGAATA 59.899 55.000 16.19 0.00 0.00 1.75
725 740 0.815095 TGAGCTCTGCCGACGAATAA 59.185 50.000 16.19 0.00 0.00 1.40
726 741 1.202302 TGAGCTCTGCCGACGAATAAG 60.202 52.381 16.19 0.00 0.00 1.73
727 742 1.065701 GAGCTCTGCCGACGAATAAGA 59.934 52.381 6.43 0.00 0.00 2.10
728 743 1.476891 AGCTCTGCCGACGAATAAGAA 59.523 47.619 0.00 0.00 0.00 2.52
729 744 2.094182 AGCTCTGCCGACGAATAAGAAA 60.094 45.455 0.00 0.00 0.00 2.52
730 745 2.029365 GCTCTGCCGACGAATAAGAAAC 59.971 50.000 0.00 0.00 0.00 2.78
731 746 3.250744 CTCTGCCGACGAATAAGAAACA 58.749 45.455 0.00 0.00 0.00 2.83
732 747 2.991190 TCTGCCGACGAATAAGAAACAC 59.009 45.455 0.00 0.00 0.00 3.32
733 748 1.722464 TGCCGACGAATAAGAAACACG 59.278 47.619 0.00 0.00 0.00 4.49
734 749 1.987770 GCCGACGAATAAGAAACACGA 59.012 47.619 0.00 0.00 0.00 4.35
735 750 2.027688 GCCGACGAATAAGAAACACGAG 59.972 50.000 0.00 0.00 0.00 4.18
736 751 2.027688 CCGACGAATAAGAAACACGAGC 59.972 50.000 0.00 0.00 0.00 5.03
737 752 2.915463 CGACGAATAAGAAACACGAGCT 59.085 45.455 0.00 0.00 0.00 4.09
738 753 3.001954 CGACGAATAAGAAACACGAGCTC 60.002 47.826 2.73 2.73 0.00 4.09
739 754 4.167268 GACGAATAAGAAACACGAGCTCT 58.833 43.478 12.85 0.00 0.00 4.09
740 755 3.921021 ACGAATAAGAAACACGAGCTCTG 59.079 43.478 12.85 11.44 0.00 3.35
741 756 3.241804 CGAATAAGAAACACGAGCTCTGC 60.242 47.826 12.85 0.00 0.00 4.26
742 757 2.080286 TAAGAAACACGAGCTCTGCC 57.920 50.000 12.85 3.16 0.00 4.85
743 758 0.946221 AAGAAACACGAGCTCTGCCG 60.946 55.000 12.85 0.93 0.00 5.69
744 759 1.372997 GAAACACGAGCTCTGCCGA 60.373 57.895 12.85 0.00 0.00 5.54
745 760 1.618640 GAAACACGAGCTCTGCCGAC 61.619 60.000 12.85 0.00 0.00 4.79
746 761 2.363711 AAACACGAGCTCTGCCGACA 62.364 55.000 12.85 0.00 0.00 4.35
753 768 0.607489 AGCTCTGCCGACAAAGCATT 60.607 50.000 0.00 0.00 40.04 3.56
755 770 1.468520 GCTCTGCCGACAAAGCATTTA 59.531 47.619 0.00 0.00 40.04 1.40
775 790 5.756195 TTAGCACAGCCATTCACATATTC 57.244 39.130 0.00 0.00 0.00 1.75
778 793 3.130869 GCACAGCCATTCACATATTCCAA 59.869 43.478 0.00 0.00 0.00 3.53
780 795 5.682990 GCACAGCCATTCACATATTCCAAAT 60.683 40.000 0.00 0.00 0.00 2.32
783 798 7.010738 CACAGCCATTCACATATTCCAAATTTC 59.989 37.037 0.00 0.00 0.00 2.17
784 799 6.480981 CAGCCATTCACATATTCCAAATTTCC 59.519 38.462 0.00 0.00 0.00 3.13
786 801 6.822676 GCCATTCACATATTCCAAATTTCCAA 59.177 34.615 0.00 0.00 0.00 3.53
787 802 7.499895 GCCATTCACATATTCCAAATTTCCAAT 59.500 33.333 0.00 0.00 0.00 3.16
788 803 9.398538 CCATTCACATATTCCAAATTTCCAATT 57.601 29.630 0.00 0.00 0.00 2.32
810 825 4.944619 TTTTTACACAACCATGCATCCA 57.055 36.364 0.00 0.00 0.00 3.41
811 826 4.517952 TTTTACACAACCATGCATCCAG 57.482 40.909 0.00 0.00 0.00 3.86
829 844 8.697846 GCATCCAGCAATTATATACGTAGTAA 57.302 34.615 0.08 3.68 45.60 2.24
830 845 9.146984 GCATCCAGCAATTATATACGTAGTAAA 57.853 33.333 0.08 0.00 45.60 2.01
879 1057 2.092212 AGGTTGGATGATTGCTACAGGG 60.092 50.000 0.00 0.00 0.00 4.45
880 1058 1.678101 GTTGGATGATTGCTACAGGGC 59.322 52.381 0.00 0.00 0.00 5.19
881 1059 0.179048 TGGATGATTGCTACAGGGCG 60.179 55.000 0.00 0.00 34.52 6.13
884 1068 2.902343 GATTGCTACAGGGCGGCC 60.902 66.667 22.67 22.67 34.52 6.13
937 1129 0.853530 ACTTTTTCCTGCAGAGGGGT 59.146 50.000 17.39 3.30 40.25 4.95
938 1130 1.251251 CTTTTTCCTGCAGAGGGGTG 58.749 55.000 17.39 0.00 40.25 4.61
1131 1344 4.293368 AGGGAAGAAGATGAAAAGGATGGT 59.707 41.667 0.00 0.00 0.00 3.55
1158 1371 0.760567 TGACTGACCTGACTGGCACT 60.761 55.000 0.00 0.00 40.22 4.40
1245 1475 4.405671 GAGCCTGGCTGCAGCTGA 62.406 66.667 35.82 22.30 39.88 4.26
1269 1499 2.129785 GCATCCCTTCACATGGCCC 61.130 63.158 0.00 0.00 0.00 5.80
1270 1500 1.456331 CATCCCTTCACATGGCCCC 60.456 63.158 0.00 0.00 0.00 5.80
1271 1501 2.704424 ATCCCTTCACATGGCCCCC 61.704 63.158 0.00 0.00 0.00 5.40
1272 1502 3.350163 CCCTTCACATGGCCCCCT 61.350 66.667 0.00 0.00 0.00 4.79
1273 1503 2.276740 CCTTCACATGGCCCCCTC 59.723 66.667 0.00 0.00 0.00 4.30
1276 1506 2.276309 CTTCACATGGCCCCCTCCTC 62.276 65.000 0.00 0.00 0.00 3.71
1277 1507 3.016971 CACATGGCCCCCTCCTCA 61.017 66.667 0.00 0.00 0.00 3.86
1291 1542 1.839994 CTCCTCATGGTTGCTTCCCTA 59.160 52.381 0.00 0.00 34.23 3.53
1303 1554 1.118838 CTTCCCTAGCACTCCTCTGG 58.881 60.000 0.00 0.00 0.00 3.86
1310 1561 0.334676 AGCACTCCTCTGGCTAGTCT 59.665 55.000 0.00 0.00 35.82 3.24
1312 1563 1.134848 GCACTCCTCTGGCTAGTCTTG 60.135 57.143 0.00 0.00 0.00 3.02
1317 1568 1.066573 CCTCTGGCTAGTCTTGTGTGG 60.067 57.143 0.00 0.00 0.00 4.17
1318 1569 1.620819 CTCTGGCTAGTCTTGTGTGGT 59.379 52.381 0.00 0.00 0.00 4.16
1319 1570 1.344438 TCTGGCTAGTCTTGTGTGGTG 59.656 52.381 0.00 0.00 0.00 4.17
1320 1571 1.344438 CTGGCTAGTCTTGTGTGGTGA 59.656 52.381 0.00 0.00 0.00 4.02
1321 1572 1.977854 TGGCTAGTCTTGTGTGGTGAT 59.022 47.619 0.00 0.00 0.00 3.06
1322 1573 2.028112 TGGCTAGTCTTGTGTGGTGATC 60.028 50.000 0.00 0.00 0.00 2.92
1323 1574 2.234908 GGCTAGTCTTGTGTGGTGATCT 59.765 50.000 0.00 0.00 0.00 2.75
1324 1575 3.516615 GCTAGTCTTGTGTGGTGATCTC 58.483 50.000 0.00 0.00 0.00 2.75
1325 1576 3.677424 GCTAGTCTTGTGTGGTGATCTCC 60.677 52.174 6.88 6.88 0.00 3.71
1326 1577 2.614259 AGTCTTGTGTGGTGATCTCCT 58.386 47.619 14.65 0.00 0.00 3.69
1327 1578 2.564947 AGTCTTGTGTGGTGATCTCCTC 59.435 50.000 14.65 11.51 0.00 3.71
1334 1585 0.263172 TGGTGATCTCCTCCTCCTCC 59.737 60.000 14.65 0.00 0.00 4.30
1380 1631 1.094073 CATCTTCTTCCCTGCTGCGG 61.094 60.000 0.26 0.26 0.00 5.69
1381 1632 1.557269 ATCTTCTTCCCTGCTGCGGT 61.557 55.000 7.82 0.00 0.00 5.68
1399 1654 0.638746 GTGTCGCGATTGTCGGTAAG 59.361 55.000 14.06 0.00 40.84 2.34
1401 1656 1.468127 TGTCGCGATTGTCGGTAAGTA 59.532 47.619 14.06 0.00 40.84 2.24
1402 1657 2.095314 TGTCGCGATTGTCGGTAAGTAA 60.095 45.455 14.06 0.00 40.84 2.24
1411 1666 7.171434 CGATTGTCGGTAAGTAATTCTTGTTC 58.829 38.462 0.00 0.00 36.00 3.18
1420 1675 9.708092 GGTAAGTAATTCTTGTTCTACTCTTGT 57.292 33.333 0.00 0.00 37.56 3.16
1428 1707 8.561738 TTCTTGTTCTACTCTTGTCTTGTTTT 57.438 30.769 0.00 0.00 0.00 2.43
1429 1708 9.661563 TTCTTGTTCTACTCTTGTCTTGTTTTA 57.338 29.630 0.00 0.00 0.00 1.52
1430 1709 9.095065 TCTTGTTCTACTCTTGTCTTGTTTTAC 57.905 33.333 0.00 0.00 0.00 2.01
1433 1716 9.221933 TGTTCTACTCTTGTCTTGTTTTACAAA 57.778 29.630 0.00 0.00 37.69 2.83
1437 1720 9.438291 CTACTCTTGTCTTGTTTTACAAACATG 57.562 33.333 2.99 6.01 37.69 3.21
1438 1721 7.257722 ACTCTTGTCTTGTTTTACAAACATGG 58.742 34.615 12.68 6.16 37.69 3.66
1441 1724 8.402472 TCTTGTCTTGTTTTACAAACATGGTAG 58.598 33.333 12.68 4.64 37.69 3.18
1447 1730 9.790389 CTTGTTTTACAAACATGGTAGTACAAA 57.210 29.630 2.06 0.00 37.69 2.83
1457 1740 6.173339 ACATGGTAGTACAAATTGTCTCTGG 58.827 40.000 0.22 0.00 0.00 3.86
1458 1741 5.818678 TGGTAGTACAAATTGTCTCTGGT 57.181 39.130 0.22 0.00 0.00 4.00
1461 1744 3.412386 AGTACAAATTGTCTCTGGTGGC 58.588 45.455 0.22 0.00 0.00 5.01
1464 1747 0.110486 AAATTGTCTCTGGTGGCGGT 59.890 50.000 0.00 0.00 0.00 5.68
1496 1782 1.899814 AGCTCCGTTCCTGTGATTACA 59.100 47.619 0.00 0.00 35.08 2.41
1498 1784 3.055094 AGCTCCGTTCCTGTGATTACAAT 60.055 43.478 0.00 0.00 36.14 2.71
1500 1786 4.508124 GCTCCGTTCCTGTGATTACAATAG 59.492 45.833 0.00 0.00 36.14 1.73
1501 1787 4.439057 TCCGTTCCTGTGATTACAATAGC 58.561 43.478 0.00 0.00 36.14 2.97
1503 1789 4.634004 CCGTTCCTGTGATTACAATAGCAA 59.366 41.667 0.00 0.00 36.14 3.91
1504 1790 5.220662 CCGTTCCTGTGATTACAATAGCAAG 60.221 44.000 0.00 0.00 36.14 4.01
1508 1794 6.946340 TCCTGTGATTACAATAGCAAGAGAA 58.054 36.000 0.00 0.00 36.14 2.87
1510 1796 8.049117 TCCTGTGATTACAATAGCAAGAGAAAT 58.951 33.333 0.00 0.00 36.14 2.17
1511 1797 8.127327 CCTGTGATTACAATAGCAAGAGAAATG 58.873 37.037 0.00 0.00 36.14 2.32
1512 1798 8.565896 TGTGATTACAATAGCAAGAGAAATGT 57.434 30.769 0.00 0.00 32.88 2.71
1550 1841 4.086706 ACCAAACCAGAGTGAAAGTAGG 57.913 45.455 0.00 0.00 0.00 3.18
1551 1842 3.714798 ACCAAACCAGAGTGAAAGTAGGA 59.285 43.478 0.00 0.00 0.00 2.94
1556 1847 5.153950 ACCAGAGTGAAAGTAGGACAATC 57.846 43.478 0.00 0.00 0.00 2.67
1570 1888 3.000727 GGACAATCCTGTTCTACGTTGG 58.999 50.000 0.00 0.00 35.30 3.77
1572 1890 4.322198 GGACAATCCTGTTCTACGTTGGTA 60.322 45.833 0.00 0.00 35.30 3.25
1574 1892 5.801380 ACAATCCTGTTCTACGTTGGTATT 58.199 37.500 0.00 0.00 28.57 1.89
1575 1893 5.642063 ACAATCCTGTTCTACGTTGGTATTG 59.358 40.000 0.00 0.00 28.57 1.90
1576 1894 4.196626 TCCTGTTCTACGTTGGTATTGG 57.803 45.455 0.00 0.00 0.00 3.16
1577 1895 3.833650 TCCTGTTCTACGTTGGTATTGGA 59.166 43.478 0.00 0.00 0.00 3.53
1578 1896 3.930848 CCTGTTCTACGTTGGTATTGGAC 59.069 47.826 0.00 0.00 0.00 4.02
1599 1917 2.947652 CCAGCAGGAACATACCAATCAG 59.052 50.000 0.00 0.00 36.89 2.90
1606 1924 5.066893 CAGGAACATACCAATCAGAACATGG 59.933 44.000 0.00 0.00 40.16 3.66
1625 1943 2.224744 TGGTCATTTGCAGCCAACTCTA 60.225 45.455 0.00 0.00 0.00 2.43
1643 1963 9.612620 CCAACTCTAATTGTTTGTTCATCTAAC 57.387 33.333 0.00 0.00 38.67 2.34
1644 1964 9.612620 CAACTCTAATTGTTTGTTCATCTAACC 57.387 33.333 0.00 0.00 37.27 2.85
1698 2035 3.715854 GCTTGCTGCAAGAGGATTG 57.284 52.632 38.49 17.10 43.42 2.67
1713 2050 2.024655 AGGATTGGCACCATGAACTGAT 60.025 45.455 0.00 0.00 0.00 2.90
1714 2051 2.360165 GGATTGGCACCATGAACTGATC 59.640 50.000 0.00 0.00 0.00 2.92
1715 2052 1.452110 TTGGCACCATGAACTGATCG 58.548 50.000 0.00 0.00 0.00 3.69
1716 2053 0.612744 TGGCACCATGAACTGATCGA 59.387 50.000 0.00 0.00 0.00 3.59
1725 2062 4.143030 CCATGAACTGATCGAACAACTCAC 60.143 45.833 8.08 0.00 0.00 3.51
1729 2066 3.384668 ACTGATCGAACAACTCACACTG 58.615 45.455 0.00 0.00 0.00 3.66
1740 2077 2.031919 CACACTGCTGCCGGGTAA 59.968 61.111 2.18 0.00 0.00 2.85
1743 2080 0.960364 ACACTGCTGCCGGGTAATTG 60.960 55.000 2.18 0.00 0.00 2.32
1745 2082 0.392998 ACTGCTGCCGGGTAATTGAG 60.393 55.000 2.18 0.00 0.00 3.02
1804 2146 1.515304 GAAGACGAGCCAGAGACGC 60.515 63.158 0.00 0.00 0.00 5.19
1819 2161 0.867753 GACGCGCTACACAGATCCAG 60.868 60.000 5.73 0.00 0.00 3.86
1891 2233 1.604378 CGACCCCAAGCTCATCCTT 59.396 57.895 0.00 0.00 0.00 3.36
1911 2253 0.957888 GACAGGAAGCAAGGGAGCAC 60.958 60.000 0.00 0.00 36.85 4.40
1954 2296 5.818678 TTCCTGGTACTGCTTCTCTTAAA 57.181 39.130 0.00 0.00 0.00 1.52
1956 2298 5.734720 TCCTGGTACTGCTTCTCTTAAATG 58.265 41.667 0.00 0.00 0.00 2.32
1957 2299 5.248477 TCCTGGTACTGCTTCTCTTAAATGT 59.752 40.000 0.00 0.00 0.00 2.71
1959 2301 6.535508 CCTGGTACTGCTTCTCTTAAATGTAC 59.464 42.308 0.00 0.00 0.00 2.90
1960 2302 6.999950 TGGTACTGCTTCTCTTAAATGTACA 58.000 36.000 0.00 0.00 33.05 2.90
1963 2307 8.228464 GGTACTGCTTCTCTTAAATGTACAAAC 58.772 37.037 0.00 0.00 33.05 2.93
1970 2314 6.966021 TCTCTTAAATGTACAAACCAACAGC 58.034 36.000 0.00 0.00 0.00 4.40
2104 2455 4.748892 TCCTTCGCTTCACAATTCTCTAG 58.251 43.478 0.00 0.00 0.00 2.43
2209 2561 9.927668 CTTGTTGTAAATTCTGTTATTGGGATT 57.072 29.630 0.00 0.00 0.00 3.01
2217 2569 6.870971 TTCTGTTATTGGGATTTATACCGC 57.129 37.500 0.00 0.00 31.47 5.68
2218 2570 6.182507 TCTGTTATTGGGATTTATACCGCT 57.817 37.500 0.00 0.00 31.47 5.52
2219 2571 6.597562 TCTGTTATTGGGATTTATACCGCTT 58.402 36.000 0.00 0.00 31.47 4.68
2220 2572 6.708949 TCTGTTATTGGGATTTATACCGCTTC 59.291 38.462 0.00 0.00 31.47 3.86
2221 2573 6.597562 TGTTATTGGGATTTATACCGCTTCT 58.402 36.000 0.00 0.00 31.47 2.85
2222 2574 7.737869 TGTTATTGGGATTTATACCGCTTCTA 58.262 34.615 0.00 0.00 31.47 2.10
2223 2575 7.876068 TGTTATTGGGATTTATACCGCTTCTAG 59.124 37.037 0.00 0.00 31.47 2.43
2412 2789 2.031191 AGCGTGTTCGTTAAAACCACAG 59.969 45.455 0.00 0.00 39.49 3.66
2481 2859 1.295792 TCGCTGTGACTTGTGGTTTC 58.704 50.000 0.00 0.00 0.00 2.78
2684 3064 4.005650 TCATTCAGTCCTCTTGATGCAAC 58.994 43.478 0.00 0.00 0.00 4.17
2686 3066 1.081892 CAGTCCTCTTGATGCAACGG 58.918 55.000 0.00 0.00 0.00 4.44
2717 3097 8.559536 TCTGTTCAAGCTTTTCTATTGTTGTAG 58.440 33.333 0.00 0.00 0.00 2.74
2718 3098 8.220755 TGTTCAAGCTTTTCTATTGTTGTAGT 57.779 30.769 0.00 0.00 0.00 2.73
2719 3099 9.332502 TGTTCAAGCTTTTCTATTGTTGTAGTA 57.667 29.630 0.00 0.00 0.00 1.82
2807 3574 0.249398 ACACGGAGGAATGCAGTACC 59.751 55.000 0.00 0.00 0.00 3.34
2836 3603 3.254166 CCAACTGTCAAAAGACTCATGGG 59.746 47.826 0.00 0.00 0.00 4.00
2942 3709 4.394920 GTCTGTCTGGACAAAAGAACAACA 59.605 41.667 4.94 0.00 41.33 3.33
3007 3774 0.254178 GGCATTGCTTCCTCCTCTGA 59.746 55.000 8.82 0.00 0.00 3.27
3010 3777 2.630158 CATTGCTTCCTCCTCTGAGTG 58.370 52.381 3.66 0.00 36.86 3.51
3148 3915 4.943705 TGATTGCAGGAATAAGAGTGAACC 59.056 41.667 0.00 0.00 0.00 3.62
3217 3984 0.329596 AATCCTCCCTGTGACCTTGC 59.670 55.000 0.00 0.00 0.00 4.01
3222 3989 2.636830 CTCCCTGTGACCTTGCTTATG 58.363 52.381 0.00 0.00 0.00 1.90
3230 3997 5.376625 TGTGACCTTGCTTATGAGAAAACT 58.623 37.500 0.00 0.00 0.00 2.66
3297 4064 1.082954 AGACATGTAGGGGCCAGGT 59.917 57.895 4.39 0.00 0.00 4.00
3308 4075 1.382629 GGCCAGGTTAGAGCCCAAA 59.617 57.895 0.00 0.00 41.00 3.28
3398 4165 8.450578 TCAAAACAAAGAATAAAGAGAGCAGA 57.549 30.769 0.00 0.00 0.00 4.26
3444 4211 1.624336 ACCAAGCAGAACACATGCAT 58.376 45.000 0.00 0.00 46.31 3.96
3449 4216 2.357075 AGCAGAACACATGCATCAGAG 58.643 47.619 0.00 0.00 46.31 3.35
3494 4261 9.698617 GTTAACAAAATAGTAATACTCAAGCCG 57.301 33.333 0.00 0.00 0.00 5.52
3509 4276 1.524849 GCCGAATCCAAGGAGAGGC 60.525 63.158 13.79 13.79 35.78 4.70
3523 4290 2.769095 GGAGAGGCTTTGATCCTACAGT 59.231 50.000 0.00 0.00 33.24 3.55
3541 4308 3.447742 CAGTAGCAACTGCATCGACATA 58.552 45.455 4.22 0.00 46.28 2.29
3545 4312 4.123497 AGCAACTGCATCGACATACTTA 57.877 40.909 4.22 0.00 45.16 2.24
3550 4317 5.262588 ACTGCATCGACATACTTACATCA 57.737 39.130 0.00 0.00 0.00 3.07
3836 4603 4.764050 TTCACTAGGTGGTTTCAACAGA 57.236 40.909 0.00 0.00 33.87 3.41
3845 4612 3.678548 GTGGTTTCAACAGAGACGTATCC 59.321 47.826 6.56 0.00 0.00 2.59
3927 4694 4.141711 TGAAGGACAATACTCATACTGGCC 60.142 45.833 0.00 0.00 37.22 5.36
3941 4708 1.207791 CTGGCCAGTATCCAAGTCCT 58.792 55.000 25.53 0.00 32.41 3.85
3942 4709 1.561542 CTGGCCAGTATCCAAGTCCTT 59.438 52.381 25.53 0.00 32.41 3.36
4156 4935 2.027192 GGAGTGCTGAATGTGGTCCTAA 60.027 50.000 0.00 0.00 0.00 2.69
4166 4945 3.500448 TGTGGTCCTAATGAAGCAACA 57.500 42.857 0.00 0.00 0.00 3.33
4343 5122 5.248640 TGAAGAAACTGACAATCTGGATCC 58.751 41.667 4.20 4.20 0.00 3.36
4391 5174 1.068748 CATTCCAGCAGAGCAACACAC 60.069 52.381 0.00 0.00 0.00 3.82
4396 5179 2.751259 CCAGCAGAGCAACACACATATT 59.249 45.455 0.00 0.00 0.00 1.28
4402 5185 5.220548 GCAGAGCAACACACATATTACTCAG 60.221 44.000 0.00 0.00 0.00 3.35
4469 5258 7.604927 AGTTTCCGTTGATGTGCTAGTTTAATA 59.395 33.333 0.00 0.00 0.00 0.98
4471 5260 8.500753 TTCCGTTGATGTGCTAGTTTAATAAT 57.499 30.769 0.00 0.00 0.00 1.28
4799 5594 6.256321 CCATTGACCTTCAGAAAAACAAAGTG 59.744 38.462 0.00 0.00 0.00 3.16
4801 5596 6.339587 TGACCTTCAGAAAAACAAAGTGTT 57.660 33.333 0.00 0.00 43.41 3.32
4960 5760 8.526147 GTCAGGTTAGGTTACATAGAAACAGTA 58.474 37.037 0.00 0.00 0.00 2.74
4985 5785 4.202192 TGGAGCTATCAGAACTATGCACAG 60.202 45.833 0.00 0.00 0.00 3.66
5158 5958 2.039418 GGAAACCCCCATTGCTTATCC 58.961 52.381 0.00 0.00 0.00 2.59
5268 6068 4.344679 TGAATTTCCAAGCACATTGAACCT 59.655 37.500 0.00 0.00 41.83 3.50
5388 6188 3.982475 TGCTAGAAGATGTCGCTTATGG 58.018 45.455 0.00 0.00 0.00 2.74
5399 6199 2.544267 GTCGCTTATGGCTTGTGGATAC 59.456 50.000 0.00 0.00 39.13 2.24
5430 6230 2.012673 GGCGATCAACTCAGAGCATTT 58.987 47.619 0.00 0.00 0.00 2.32
5520 6321 3.963476 TTTTTCCCCCTCTTGTGAAGA 57.037 42.857 0.00 0.00 35.87 2.87
5521 6322 3.963476 TTTTCCCCCTCTTGTGAAGAA 57.037 42.857 0.00 0.00 37.02 2.52
5522 6323 3.963476 TTTCCCCCTCTTGTGAAGAAA 57.037 42.857 0.00 0.00 37.02 2.52
5523 6324 3.508845 TTCCCCCTCTTGTGAAGAAAG 57.491 47.619 0.00 0.00 37.02 2.62
5545 6346 0.887933 TGATAGTGTGCAGCTGACGA 59.112 50.000 20.43 3.32 0.00 4.20
5609 6417 7.010697 TGTGATTTGTGTAACTTGTAGTGTG 57.989 36.000 0.00 0.00 38.04 3.82
5629 6437 6.542370 AGTGTGAGTTAGTTGTGCAAAATACT 59.458 34.615 0.00 0.00 0.00 2.12
5706 6519 6.469322 CGCATAATCAACACCGATACATATG 58.531 40.000 0.00 0.00 0.00 1.78
5711 6524 7.425577 AATCAACACCGATACATATGTCATG 57.574 36.000 12.68 7.32 0.00 3.07
5768 6608 6.511121 GCAGTTTCAGAATTCGACAACAGTAA 60.511 38.462 14.97 0.00 0.00 2.24
5849 6692 0.765510 GGACAGGAGGCCGGATTAAT 59.234 55.000 5.05 0.00 0.00 1.40
5957 6823 3.715015 GGACCTGTCCTCCTCCAC 58.285 66.667 9.11 0.00 46.16 4.02
5972 6838 0.119155 TCCACAGATCCCCTTCCACT 59.881 55.000 0.00 0.00 0.00 4.00
6006 6887 1.668101 CGTTTCCTCCCTCCTCCTCG 61.668 65.000 0.00 0.00 0.00 4.63
6012 6893 3.203412 CCCTCCTCCTCGTCGTCG 61.203 72.222 0.00 0.00 38.55 5.12
6057 6938 1.079057 GACGAAGCCCTTCTGTCCC 60.079 63.158 15.58 1.67 37.26 4.46
6183 7064 2.300437 CACCCTCGTCTTCTCCTTCTTT 59.700 50.000 0.00 0.00 0.00 2.52
6201 7082 3.835395 TCTTTGTCCTCTCTTCTCCCTTC 59.165 47.826 0.00 0.00 0.00 3.46
6206 7087 2.202810 CTCTTCTCCCTTCGCGGC 60.203 66.667 6.13 0.00 0.00 6.53
6344 7226 2.267961 CGGTAACCCTGGGTCAGC 59.732 66.667 20.85 14.24 33.12 4.26
6461 7343 1.412343 GCCCAACAAATCACTGGTTGT 59.588 47.619 0.00 0.00 40.10 3.32
6494 7379 4.619437 TTTCGTTGTGAAACTTACACCC 57.381 40.909 0.00 0.00 41.59 4.61
6496 7381 3.460103 TCGTTGTGAAACTTACACCCTC 58.540 45.455 0.00 0.00 38.04 4.30
6516 7401 5.163713 CCCTCGAATCCTCAATTTGAACTTC 60.164 44.000 0.01 3.59 37.33 3.01
6565 7466 0.999406 CGATGGAATGTCCGTGTGTC 59.001 55.000 0.00 0.00 40.17 3.67
6588 7495 1.378531 TTGCACCTTATCGCATGTCC 58.621 50.000 0.00 0.00 38.10 4.02
6590 7497 1.498865 GCACCTTATCGCATGTCCCG 61.499 60.000 0.00 0.00 0.00 5.14
6618 7625 4.129380 CGGATTATTCTTCATGGCAGACA 58.871 43.478 0.00 0.00 0.00 3.41
6699 7706 0.666577 GTGAAGAACCACGACTCCGG 60.667 60.000 0.00 0.00 40.78 5.14
6770 11220 2.096069 GGCGCACACATCTATATGCAAG 60.096 50.000 10.83 0.00 37.97 4.01
6785 11236 9.896645 TCTATATGCAAGGATGATAAAAGGATC 57.103 33.333 0.00 0.00 0.00 3.36
6847 11298 8.600449 TGCAATTAATCGTATGATACACATGA 57.400 30.769 0.00 0.00 39.77 3.07
6911 11362 1.741770 ATCGTTGAGCCGCTTGGTC 60.742 57.895 0.00 0.00 41.96 4.02
6971 11422 1.536284 GCTTCGATGAAGTACTCCCCG 60.536 57.143 8.23 0.00 41.27 5.73
7029 11480 2.431942 CCAGACCGAAACCGTCCG 60.432 66.667 0.00 0.00 0.00 4.79
7036 11487 3.039588 GAAACCGTCCGCGAGCAA 61.040 61.111 8.23 0.00 41.33 3.91
7055 11506 3.954904 GCAAGGAGTACTGGTAGATGAGA 59.045 47.826 0.00 0.00 0.00 3.27
7064 11515 3.908733 ACTGGTAGATGAGATCCATGCAT 59.091 43.478 0.00 0.00 35.17 3.96
7080 11531 1.733041 CATATGTAGGGCGCGTCGG 60.733 63.158 8.43 0.00 0.00 4.79
7178 11629 3.256960 GCAGGGGTGGTCTTCCCA 61.257 66.667 3.37 0.00 46.26 4.37
7208 11659 1.069978 TCACTGTCGATCAAGCCAACA 59.930 47.619 0.00 0.00 0.00 3.33
7213 11664 2.028203 TGTCGATCAAGCCAACATCTGA 60.028 45.455 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 5.036916 AGGGAGATAGTTTACATGTGGGAA 58.963 41.667 9.11 0.00 0.00 3.97
3 4 4.631234 AGGGAGATAGTTTACATGTGGGA 58.369 43.478 9.11 0.00 0.00 4.37
4 5 5.373812 AAGGGAGATAGTTTACATGTGGG 57.626 43.478 9.11 0.00 0.00 4.61
5 6 5.066505 GCAAAGGGAGATAGTTTACATGTGG 59.933 44.000 9.11 0.00 0.00 4.17
6 7 5.066505 GGCAAAGGGAGATAGTTTACATGTG 59.933 44.000 9.11 0.00 0.00 3.21
8 9 4.580580 GGGCAAAGGGAGATAGTTTACATG 59.419 45.833 0.00 0.00 0.00 3.21
10 11 3.589735 TGGGCAAAGGGAGATAGTTTACA 59.410 43.478 0.00 0.00 0.00 2.41
11 12 4.230745 TGGGCAAAGGGAGATAGTTTAC 57.769 45.455 0.00 0.00 0.00 2.01
12 13 5.200483 CAATGGGCAAAGGGAGATAGTTTA 58.800 41.667 0.00 0.00 0.00 2.01
13 14 4.026052 CAATGGGCAAAGGGAGATAGTTT 58.974 43.478 0.00 0.00 0.00 2.66
14 15 3.011708 ACAATGGGCAAAGGGAGATAGTT 59.988 43.478 0.00 0.00 0.00 2.24
15 16 2.582636 ACAATGGGCAAAGGGAGATAGT 59.417 45.455 0.00 0.00 0.00 2.12
16 17 3.303351 ACAATGGGCAAAGGGAGATAG 57.697 47.619 0.00 0.00 0.00 2.08
17 18 3.435026 GCTACAATGGGCAAAGGGAGATA 60.435 47.826 0.00 0.00 0.00 1.98
18 19 2.687914 GCTACAATGGGCAAAGGGAGAT 60.688 50.000 0.00 0.00 0.00 2.75
19 20 1.340991 GCTACAATGGGCAAAGGGAGA 60.341 52.381 0.00 0.00 0.00 3.71
20 21 1.106285 GCTACAATGGGCAAAGGGAG 58.894 55.000 0.00 0.00 0.00 4.30
21 22 0.324275 GGCTACAATGGGCAAAGGGA 60.324 55.000 3.34 0.00 0.00 4.20
22 23 0.614415 TGGCTACAATGGGCAAAGGG 60.614 55.000 3.34 0.00 36.34 3.95
23 24 1.265236 TTGGCTACAATGGGCAAAGG 58.735 50.000 0.00 0.00 44.18 3.11
26 27 1.342819 GTGTTTGGCTACAATGGGCAA 59.657 47.619 0.00 0.00 45.16 4.52
27 28 0.965439 GTGTTTGGCTACAATGGGCA 59.035 50.000 3.34 0.00 36.29 5.36
28 29 0.109319 CGTGTTTGGCTACAATGGGC 60.109 55.000 0.00 0.00 36.29 5.36
29 30 0.109319 GCGTGTTTGGCTACAATGGG 60.109 55.000 0.00 0.00 36.29 4.00
30 31 0.881118 AGCGTGTTTGGCTACAATGG 59.119 50.000 0.00 0.00 39.39 3.16
31 32 1.266718 ACAGCGTGTTTGGCTACAATG 59.733 47.619 0.00 0.00 39.08 2.82
32 33 1.535462 GACAGCGTGTTTGGCTACAAT 59.465 47.619 0.00 0.00 39.08 2.71
33 34 0.941542 GACAGCGTGTTTGGCTACAA 59.058 50.000 0.00 0.00 39.08 2.41
34 35 0.179070 TGACAGCGTGTTTGGCTACA 60.179 50.000 0.00 0.00 39.08 2.74
35 36 0.512952 CTGACAGCGTGTTTGGCTAC 59.487 55.000 0.00 0.00 39.08 3.58
36 37 0.602638 CCTGACAGCGTGTTTGGCTA 60.603 55.000 0.00 0.00 39.08 3.93
37 38 1.893808 CCTGACAGCGTGTTTGGCT 60.894 57.895 0.00 0.00 42.61 4.75
38 39 2.639286 CCTGACAGCGTGTTTGGC 59.361 61.111 0.00 0.00 0.00 4.52
39 40 1.227823 TCCCTGACAGCGTGTTTGG 60.228 57.895 0.00 0.00 0.00 3.28
40 41 0.249868 TCTCCCTGACAGCGTGTTTG 60.250 55.000 0.00 0.00 0.00 2.93
41 42 0.034059 CTCTCCCTGACAGCGTGTTT 59.966 55.000 0.00 0.00 0.00 2.83
42 43 0.827925 TCTCTCCCTGACAGCGTGTT 60.828 55.000 0.00 0.00 0.00 3.32
43 44 1.228583 TCTCTCCCTGACAGCGTGT 60.229 57.895 0.00 0.00 0.00 4.49
44 45 0.962855 TCTCTCTCCCTGACAGCGTG 60.963 60.000 0.00 0.00 0.00 5.34
45 46 0.251386 TTCTCTCTCCCTGACAGCGT 60.251 55.000 0.00 0.00 0.00 5.07
46 47 0.891373 TTTCTCTCTCCCTGACAGCG 59.109 55.000 0.00 0.00 0.00 5.18
47 48 2.166254 CTCTTTCTCTCTCCCTGACAGC 59.834 54.545 0.00 0.00 0.00 4.40
48 49 3.696045 TCTCTTTCTCTCTCCCTGACAG 58.304 50.000 0.00 0.00 0.00 3.51
49 50 3.816398 TCTCTTTCTCTCTCCCTGACA 57.184 47.619 0.00 0.00 0.00 3.58
50 51 5.690865 TCTATCTCTTTCTCTCTCCCTGAC 58.309 45.833 0.00 0.00 0.00 3.51
51 52 5.985175 TCTATCTCTTTCTCTCTCCCTGA 57.015 43.478 0.00 0.00 0.00 3.86
52 53 6.886459 CCTATCTATCTCTTTCTCTCTCCCTG 59.114 46.154 0.00 0.00 0.00 4.45
53 54 6.011628 CCCTATCTATCTCTTTCTCTCTCCCT 60.012 46.154 0.00 0.00 0.00 4.20
54 55 6.187682 CCCTATCTATCTCTTTCTCTCTCCC 58.812 48.000 0.00 0.00 0.00 4.30
55 56 6.659242 CACCCTATCTATCTCTTTCTCTCTCC 59.341 46.154 0.00 0.00 0.00 3.71
56 57 7.231467 ACACCCTATCTATCTCTTTCTCTCTC 58.769 42.308 0.00 0.00 0.00 3.20
57 58 7.161715 ACACCCTATCTATCTCTTTCTCTCT 57.838 40.000 0.00 0.00 0.00 3.10
58 59 7.833285 AACACCCTATCTATCTCTTTCTCTC 57.167 40.000 0.00 0.00 0.00 3.20
59 60 9.362151 CTAAACACCCTATCTATCTCTTTCTCT 57.638 37.037 0.00 0.00 0.00 3.10
60 61 9.138596 ACTAAACACCCTATCTATCTCTTTCTC 57.861 37.037 0.00 0.00 0.00 2.87
61 62 9.495382 AACTAAACACCCTATCTATCTCTTTCT 57.505 33.333 0.00 0.00 0.00 2.52
67 68 8.804204 CGGAATAACTAAACACCCTATCTATCT 58.196 37.037 0.00 0.00 0.00 1.98
68 69 8.033626 CCGGAATAACTAAACACCCTATCTATC 58.966 40.741 0.00 0.00 0.00 2.08
69 70 7.511714 ACCGGAATAACTAAACACCCTATCTAT 59.488 37.037 9.46 0.00 0.00 1.98
70 71 6.840705 ACCGGAATAACTAAACACCCTATCTA 59.159 38.462 9.46 0.00 0.00 1.98
71 72 5.664457 ACCGGAATAACTAAACACCCTATCT 59.336 40.000 9.46 0.00 0.00 1.98
72 73 5.756833 CACCGGAATAACTAAACACCCTATC 59.243 44.000 9.46 0.00 0.00 2.08
73 74 5.677567 CACCGGAATAACTAAACACCCTAT 58.322 41.667 9.46 0.00 0.00 2.57
74 75 4.623647 GCACCGGAATAACTAAACACCCTA 60.624 45.833 9.46 0.00 0.00 3.53
75 76 3.871074 GCACCGGAATAACTAAACACCCT 60.871 47.826 9.46 0.00 0.00 4.34
76 77 2.421073 GCACCGGAATAACTAAACACCC 59.579 50.000 9.46 0.00 0.00 4.61
77 78 3.340928 AGCACCGGAATAACTAAACACC 58.659 45.455 9.46 0.00 0.00 4.16
78 79 4.214758 ACAAGCACCGGAATAACTAAACAC 59.785 41.667 9.46 0.00 0.00 3.32
79 80 4.391155 ACAAGCACCGGAATAACTAAACA 58.609 39.130 9.46 0.00 0.00 2.83
80 81 5.151389 CAACAAGCACCGGAATAACTAAAC 58.849 41.667 9.46 0.00 0.00 2.01
81 82 4.320641 GCAACAAGCACCGGAATAACTAAA 60.321 41.667 9.46 0.00 44.79 1.85
82 83 3.189702 GCAACAAGCACCGGAATAACTAA 59.810 43.478 9.46 0.00 44.79 2.24
83 84 2.745281 GCAACAAGCACCGGAATAACTA 59.255 45.455 9.46 0.00 44.79 2.24
84 85 1.539827 GCAACAAGCACCGGAATAACT 59.460 47.619 9.46 0.00 44.79 2.24
85 86 1.977188 GCAACAAGCACCGGAATAAC 58.023 50.000 9.46 0.00 44.79 1.89
96 97 1.693083 CTACGCTACCGGCAACAAGC 61.693 60.000 0.00 1.98 41.91 4.01
97 98 1.693083 GCTACGCTACCGGCAACAAG 61.693 60.000 0.00 0.00 41.91 3.16
98 99 1.738830 GCTACGCTACCGGCAACAA 60.739 57.895 0.00 0.00 41.91 2.83
99 100 2.125832 GCTACGCTACCGGCAACA 60.126 61.111 0.00 0.00 41.91 3.33
100 101 2.889018 GGCTACGCTACCGGCAAC 60.889 66.667 0.00 0.00 41.91 4.17
101 102 4.501714 CGGCTACGCTACCGGCAA 62.502 66.667 0.00 0.00 45.74 4.52
111 112 4.796231 AGAACGCAGGCGGCTACG 62.796 66.667 27.86 27.86 44.69 3.51
112 113 3.188786 CAGAACGCAGGCGGCTAC 61.189 66.667 12.74 4.75 44.69 3.58
124 125 1.226746 AAACCTAGCACACGCAGAAC 58.773 50.000 0.00 0.00 42.27 3.01
125 126 1.961793 AAAACCTAGCACACGCAGAA 58.038 45.000 0.00 0.00 42.27 3.02
126 127 1.871039 GAAAAACCTAGCACACGCAGA 59.129 47.619 0.00 0.00 42.27 4.26
127 128 1.601903 TGAAAAACCTAGCACACGCAG 59.398 47.619 0.00 0.00 42.27 5.18
128 129 1.601903 CTGAAAAACCTAGCACACGCA 59.398 47.619 0.00 0.00 42.27 5.24
129 130 1.069227 CCTGAAAAACCTAGCACACGC 60.069 52.381 0.00 0.00 38.99 5.34
130 131 2.489971 TCCTGAAAAACCTAGCACACG 58.510 47.619 0.00 0.00 0.00 4.49
131 132 4.072131 TGATCCTGAAAAACCTAGCACAC 58.928 43.478 0.00 0.00 0.00 3.82
132 133 4.365514 TGATCCTGAAAAACCTAGCACA 57.634 40.909 0.00 0.00 0.00 4.57
133 134 4.762251 AGTTGATCCTGAAAAACCTAGCAC 59.238 41.667 0.00 0.00 0.00 4.40
134 135 4.985538 AGTTGATCCTGAAAAACCTAGCA 58.014 39.130 0.00 0.00 0.00 3.49
135 136 5.966742 AAGTTGATCCTGAAAAACCTAGC 57.033 39.130 0.00 0.00 0.00 3.42
136 137 7.277174 ACAAAGTTGATCCTGAAAAACCTAG 57.723 36.000 0.00 0.00 0.00 3.02
137 138 8.754991 TTACAAAGTTGATCCTGAAAAACCTA 57.245 30.769 0.00 0.00 0.00 3.08
138 139 7.201911 CCTTACAAAGTTGATCCTGAAAAACCT 60.202 37.037 0.00 0.00 0.00 3.50
139 140 6.923508 CCTTACAAAGTTGATCCTGAAAAACC 59.076 38.462 0.00 0.00 0.00 3.27
140 141 6.923508 CCCTTACAAAGTTGATCCTGAAAAAC 59.076 38.462 0.00 0.00 0.00 2.43
141 142 6.041523 CCCCTTACAAAGTTGATCCTGAAAAA 59.958 38.462 0.00 0.00 0.00 1.94
142 143 5.538433 CCCCTTACAAAGTTGATCCTGAAAA 59.462 40.000 0.00 0.00 0.00 2.29
143 144 5.076873 CCCCTTACAAAGTTGATCCTGAAA 58.923 41.667 0.00 0.00 0.00 2.69
144 145 4.508405 CCCCCTTACAAAGTTGATCCTGAA 60.508 45.833 0.00 0.00 0.00 3.02
145 146 3.010138 CCCCCTTACAAAGTTGATCCTGA 59.990 47.826 0.00 0.00 0.00 3.86
146 147 3.356290 CCCCCTTACAAAGTTGATCCTG 58.644 50.000 0.00 0.00 0.00 3.86
147 148 2.291605 GCCCCCTTACAAAGTTGATCCT 60.292 50.000 0.00 0.00 0.00 3.24
148 149 2.100197 GCCCCCTTACAAAGTTGATCC 58.900 52.381 0.00 0.00 0.00 3.36
149 150 3.087370 AGCCCCCTTACAAAGTTGATC 57.913 47.619 0.00 0.00 0.00 2.92
150 151 3.308904 GGTAGCCCCCTTACAAAGTTGAT 60.309 47.826 0.00 0.00 0.00 2.57
151 152 2.040679 GGTAGCCCCCTTACAAAGTTGA 59.959 50.000 0.00 0.00 0.00 3.18
152 153 2.041216 AGGTAGCCCCCTTACAAAGTTG 59.959 50.000 0.00 0.00 0.00 3.16
153 154 2.307980 GAGGTAGCCCCCTTACAAAGTT 59.692 50.000 0.00 0.00 34.03 2.66
154 155 1.914108 GAGGTAGCCCCCTTACAAAGT 59.086 52.381 0.00 0.00 34.03 2.66
155 156 1.913419 TGAGGTAGCCCCCTTACAAAG 59.087 52.381 0.00 0.00 34.03 2.77
156 157 1.631898 GTGAGGTAGCCCCCTTACAAA 59.368 52.381 8.74 0.00 40.05 2.83
157 158 1.282382 GTGAGGTAGCCCCCTTACAA 58.718 55.000 8.74 0.00 40.05 2.41
158 159 0.619543 GGTGAGGTAGCCCCCTTACA 60.620 60.000 13.92 0.00 41.61 2.41
159 160 0.619543 TGGTGAGGTAGCCCCCTTAC 60.620 60.000 5.81 5.81 39.69 2.34
160 161 0.619543 GTGGTGAGGTAGCCCCCTTA 60.620 60.000 0.00 0.00 34.03 2.69
161 162 1.923909 GTGGTGAGGTAGCCCCCTT 60.924 63.158 0.00 0.00 34.03 3.95
162 163 2.285442 GTGGTGAGGTAGCCCCCT 60.285 66.667 0.00 0.00 37.62 4.79
163 164 3.408853 GGTGGTGAGGTAGCCCCC 61.409 72.222 0.00 0.00 0.00 5.40
164 165 1.923909 AAGGTGGTGAGGTAGCCCC 60.924 63.158 0.00 0.00 0.00 5.80
165 166 1.299976 CAAGGTGGTGAGGTAGCCC 59.700 63.158 0.00 0.00 0.00 5.19
166 167 1.272807 TACAAGGTGGTGAGGTAGCC 58.727 55.000 0.00 0.00 0.00 3.93
167 168 2.158943 GGATACAAGGTGGTGAGGTAGC 60.159 54.545 0.00 0.00 0.00 3.58
168 169 3.375699 AGGATACAAGGTGGTGAGGTAG 58.624 50.000 0.00 0.00 41.41 3.18
169 170 3.484953 AGGATACAAGGTGGTGAGGTA 57.515 47.619 0.00 0.00 41.41 3.08
170 171 2.344093 AGGATACAAGGTGGTGAGGT 57.656 50.000 0.00 0.00 41.41 3.85
171 172 2.418746 CGAAGGATACAAGGTGGTGAGG 60.419 54.545 0.00 0.00 41.41 3.86
172 173 2.893637 CGAAGGATACAAGGTGGTGAG 58.106 52.381 0.00 0.00 41.41 3.51
173 174 1.066430 GCGAAGGATACAAGGTGGTGA 60.066 52.381 0.00 0.00 41.41 4.02
174 175 1.369625 GCGAAGGATACAAGGTGGTG 58.630 55.000 0.00 0.00 41.41 4.17
175 176 0.252197 GGCGAAGGATACAAGGTGGT 59.748 55.000 0.00 0.00 41.41 4.16
176 177 0.463833 GGGCGAAGGATACAAGGTGG 60.464 60.000 0.00 0.00 41.41 4.61
177 178 0.810031 CGGGCGAAGGATACAAGGTG 60.810 60.000 0.00 0.00 41.41 4.00
178 179 1.262640 ACGGGCGAAGGATACAAGGT 61.263 55.000 0.00 0.00 41.41 3.50
179 180 0.748450 TACGGGCGAAGGATACAAGG 59.252 55.000 0.00 0.00 41.41 3.61
180 181 2.814280 ATACGGGCGAAGGATACAAG 57.186 50.000 0.00 0.00 41.41 3.16
181 182 3.225104 AGTATACGGGCGAAGGATACAA 58.775 45.455 10.02 0.00 41.41 2.41
182 183 2.816087 GAGTATACGGGCGAAGGATACA 59.184 50.000 10.02 0.00 41.41 2.29
183 184 3.080319 AGAGTATACGGGCGAAGGATAC 58.920 50.000 0.00 0.00 0.00 2.24
184 185 3.430042 AGAGTATACGGGCGAAGGATA 57.570 47.619 0.00 0.00 0.00 2.59
185 186 2.289592 AGAGTATACGGGCGAAGGAT 57.710 50.000 0.00 0.00 0.00 3.24
186 187 2.062971 AAGAGTATACGGGCGAAGGA 57.937 50.000 0.00 0.00 0.00 3.36
187 188 2.884894 AAAGAGTATACGGGCGAAGG 57.115 50.000 0.00 0.00 0.00 3.46
188 189 3.734735 GCTAAAAGAGTATACGGGCGAAG 59.265 47.826 0.00 0.00 0.00 3.79
189 190 3.382546 AGCTAAAAGAGTATACGGGCGAA 59.617 43.478 0.00 0.00 0.00 4.70
190 191 2.954318 AGCTAAAAGAGTATACGGGCGA 59.046 45.455 0.00 0.00 0.00 5.54
191 192 3.050619 CAGCTAAAAGAGTATACGGGCG 58.949 50.000 0.00 0.00 0.00 6.13
192 193 4.056092 ACAGCTAAAAGAGTATACGGGC 57.944 45.455 0.00 0.00 0.00 6.13
193 194 4.270325 GCAACAGCTAAAAGAGTATACGGG 59.730 45.833 0.00 0.00 0.00 5.28
194 195 5.109903 AGCAACAGCTAAAAGAGTATACGG 58.890 41.667 0.00 0.00 36.70 4.02
195 196 6.648725 AAGCAACAGCTAAAAGAGTATACG 57.351 37.500 0.00 0.00 37.72 3.06
217 218 5.733937 GCTTTCGCCCCGCTTTATAAATAAA 60.734 40.000 0.00 0.00 0.00 1.40
218 219 4.261280 GCTTTCGCCCCGCTTTATAAATAA 60.261 41.667 0.00 0.00 0.00 1.40
219 220 3.251487 GCTTTCGCCCCGCTTTATAAATA 59.749 43.478 0.00 0.00 0.00 1.40
220 221 2.034179 GCTTTCGCCCCGCTTTATAAAT 59.966 45.455 0.00 0.00 0.00 1.40
221 222 1.402613 GCTTTCGCCCCGCTTTATAAA 59.597 47.619 0.00 0.00 0.00 1.40
222 223 1.018910 GCTTTCGCCCCGCTTTATAA 58.981 50.000 0.00 0.00 0.00 0.98
223 224 2.697819 GCTTTCGCCCCGCTTTATA 58.302 52.632 0.00 0.00 0.00 0.98
224 225 3.509659 GCTTTCGCCCCGCTTTAT 58.490 55.556 0.00 0.00 0.00 1.40
234 235 3.562567 ACTCTCGATATAGGCTTTCGC 57.437 47.619 0.00 0.00 33.08 4.70
235 236 5.090083 GCTTACTCTCGATATAGGCTTTCG 58.910 45.833 0.00 0.00 0.00 3.46
236 237 5.859648 GTGCTTACTCTCGATATAGGCTTTC 59.140 44.000 0.00 0.00 0.00 2.62
237 238 5.302059 TGTGCTTACTCTCGATATAGGCTTT 59.698 40.000 0.00 0.00 0.00 3.51
238 239 4.827835 TGTGCTTACTCTCGATATAGGCTT 59.172 41.667 0.00 0.00 0.00 4.35
239 240 4.399219 TGTGCTTACTCTCGATATAGGCT 58.601 43.478 0.00 0.00 0.00 4.58
240 241 4.768130 TGTGCTTACTCTCGATATAGGC 57.232 45.455 0.00 0.00 0.00 3.93
241 242 6.914259 TGATTGTGCTTACTCTCGATATAGG 58.086 40.000 0.00 0.00 0.00 2.57
242 243 7.540400 CCTTGATTGTGCTTACTCTCGATATAG 59.460 40.741 0.00 0.00 0.00 1.31
243 244 7.014326 ACCTTGATTGTGCTTACTCTCGATATA 59.986 37.037 0.00 0.00 0.00 0.86
244 245 6.183360 ACCTTGATTGTGCTTACTCTCGATAT 60.183 38.462 0.00 0.00 0.00 1.63
245 246 5.127194 ACCTTGATTGTGCTTACTCTCGATA 59.873 40.000 0.00 0.00 0.00 2.92
246 247 4.081420 ACCTTGATTGTGCTTACTCTCGAT 60.081 41.667 0.00 0.00 0.00 3.59
247 248 3.258372 ACCTTGATTGTGCTTACTCTCGA 59.742 43.478 0.00 0.00 0.00 4.04
248 249 3.369147 CACCTTGATTGTGCTTACTCTCG 59.631 47.826 0.00 0.00 0.00 4.04
249 250 4.935885 CACCTTGATTGTGCTTACTCTC 57.064 45.455 0.00 0.00 0.00 3.20
258 259 2.143122 ACTACGTGCACCTTGATTGTG 58.857 47.619 12.15 0.00 36.79 3.33
259 260 2.543777 ACTACGTGCACCTTGATTGT 57.456 45.000 12.15 3.80 0.00 2.71
260 261 4.242475 TCTAACTACGTGCACCTTGATTG 58.758 43.478 12.15 0.00 0.00 2.67
261 262 4.219944 TCTCTAACTACGTGCACCTTGATT 59.780 41.667 12.15 2.35 0.00 2.57
262 263 3.762288 TCTCTAACTACGTGCACCTTGAT 59.238 43.478 12.15 0.00 0.00 2.57
263 264 3.151554 TCTCTAACTACGTGCACCTTGA 58.848 45.455 12.15 0.00 0.00 3.02
264 265 3.570926 TCTCTAACTACGTGCACCTTG 57.429 47.619 12.15 3.37 0.00 3.61
265 266 3.614390 GCTTCTCTAACTACGTGCACCTT 60.614 47.826 12.15 0.40 0.00 3.50
266 267 2.094649 GCTTCTCTAACTACGTGCACCT 60.095 50.000 12.15 1.77 0.00 4.00
267 268 2.260481 GCTTCTCTAACTACGTGCACC 58.740 52.381 12.15 0.00 0.00 5.01
268 269 2.942710 TGCTTCTCTAACTACGTGCAC 58.057 47.619 6.82 6.82 0.00 4.57
269 270 3.653539 TTGCTTCTCTAACTACGTGCA 57.346 42.857 0.00 0.00 0.00 4.57
270 271 6.830114 ATATTTGCTTCTCTAACTACGTGC 57.170 37.500 0.00 0.00 0.00 5.34
271 272 9.900710 ATCTATATTTGCTTCTCTAACTACGTG 57.099 33.333 0.00 0.00 0.00 4.49
280 281 7.596995 GCTCACGTTATCTATATTTGCTTCTCT 59.403 37.037 0.00 0.00 0.00 3.10
281 282 7.148722 GGCTCACGTTATCTATATTTGCTTCTC 60.149 40.741 0.00 0.00 0.00 2.87
282 283 6.647067 GGCTCACGTTATCTATATTTGCTTCT 59.353 38.462 0.00 0.00 0.00 2.85
283 284 6.400091 CGGCTCACGTTATCTATATTTGCTTC 60.400 42.308 0.00 0.00 37.93 3.86
284 285 5.405571 CGGCTCACGTTATCTATATTTGCTT 59.594 40.000 0.00 0.00 37.93 3.91
285 286 4.923871 CGGCTCACGTTATCTATATTTGCT 59.076 41.667 0.00 0.00 37.93 3.91
286 287 5.191595 CGGCTCACGTTATCTATATTTGC 57.808 43.478 0.00 0.00 37.93 3.68
316 317 0.821301 TGCACGCCAATCAAACCTCA 60.821 50.000 0.00 0.00 0.00 3.86
317 318 0.387239 GTGCACGCCAATCAAACCTC 60.387 55.000 0.00 0.00 0.00 3.85
321 322 1.535028 CTACAGTGCACGCCAATCAAA 59.465 47.619 12.01 0.00 0.00 2.69
341 342 3.075085 GCCGGCAAACGTACGTAGC 62.075 63.158 27.75 27.75 42.24 3.58
342 343 0.179166 TAGCCGGCAAACGTACGTAG 60.179 55.000 31.54 18.00 42.24 3.51
343 344 0.455972 GTAGCCGGCAAACGTACGTA 60.456 55.000 31.54 5.57 42.24 3.57
344 345 1.734117 GTAGCCGGCAAACGTACGT 60.734 57.895 31.54 16.72 42.24 3.57
345 346 1.733758 TGTAGCCGGCAAACGTACG 60.734 57.895 31.54 15.01 42.24 3.67
352 354 0.171007 GTACGTAGTGTAGCCGGCAA 59.829 55.000 31.54 11.29 45.73 4.52
384 386 0.876777 CACGTTCGTGTTGTGGGCTA 60.877 55.000 15.81 0.00 0.00 3.93
385 387 2.177580 CACGTTCGTGTTGTGGGCT 61.178 57.895 15.81 0.00 0.00 5.19
386 388 2.174969 TCACGTTCGTGTTGTGGGC 61.175 57.895 21.61 0.00 37.40 5.36
388 390 0.934496 ATGTCACGTTCGTGTTGTGG 59.066 50.000 21.61 0.00 37.40 4.17
391 393 0.303191 TGCATGTCACGTTCGTGTTG 59.697 50.000 21.61 17.91 37.40 3.33
392 394 0.303493 GTGCATGTCACGTTCGTGTT 59.697 50.000 21.61 8.32 35.76 3.32
416 418 3.375782 ACTTGCCTTGTTTTGCTCATC 57.624 42.857 0.00 0.00 0.00 2.92
419 421 9.884465 CTATTATATACTTGCCTTGTTTTGCTC 57.116 33.333 0.00 0.00 0.00 4.26
483 485 2.700897 GCTACACACAGGGACAGGATAT 59.299 50.000 0.00 0.00 0.00 1.63
505 508 5.796437 CGTTTCCGTCAAACACTTTTTAAGT 59.204 36.000 7.71 0.00 44.27 2.24
506 509 5.228427 CCGTTTCCGTCAAACACTTTTTAAG 59.772 40.000 7.71 0.00 44.27 1.85
507 510 5.094134 CCGTTTCCGTCAAACACTTTTTAA 58.906 37.500 7.71 0.00 44.27 1.52
509 512 3.503891 CCGTTTCCGTCAAACACTTTTT 58.496 40.909 7.71 0.00 44.27 1.94
510 513 2.159352 CCCGTTTCCGTCAAACACTTTT 60.159 45.455 7.71 0.00 44.27 2.27
511 514 1.402613 CCCGTTTCCGTCAAACACTTT 59.597 47.619 7.71 0.00 44.27 2.66
512 515 1.018910 CCCGTTTCCGTCAAACACTT 58.981 50.000 7.71 0.00 44.27 3.16
528 534 1.161843 AAAAAGGTGTACGCATCCCG 58.838 50.000 8.97 0.00 44.21 5.14
566 572 5.861787 ACTTATTGCGGCATTTTGAGTTAAC 59.138 36.000 2.28 0.00 0.00 2.01
573 579 5.059587 CGCATATACTTATTGCGGCATTTTG 59.940 40.000 2.28 0.00 44.06 2.44
584 590 7.495934 ACTTTGTGAAGAGCGCATATACTTATT 59.504 33.333 11.47 0.00 36.78 1.40
585 591 6.986817 ACTTTGTGAAGAGCGCATATACTTAT 59.013 34.615 11.47 0.00 36.78 1.73
586 592 6.338146 ACTTTGTGAAGAGCGCATATACTTA 58.662 36.000 11.47 0.00 36.78 2.24
587 593 5.178797 ACTTTGTGAAGAGCGCATATACTT 58.821 37.500 11.47 6.84 36.78 2.24
588 594 4.759782 ACTTTGTGAAGAGCGCATATACT 58.240 39.130 11.47 0.00 36.78 2.12
589 595 5.749109 ACTACTTTGTGAAGAGCGCATATAC 59.251 40.000 11.47 2.26 36.78 1.47
590 596 5.748630 CACTACTTTGTGAAGAGCGCATATA 59.251 40.000 11.47 0.00 40.12 0.86
591 597 4.568359 CACTACTTTGTGAAGAGCGCATAT 59.432 41.667 11.47 0.00 40.12 1.78
592 598 3.926527 CACTACTTTGTGAAGAGCGCATA 59.073 43.478 11.47 0.00 40.12 3.14
593 599 2.738846 CACTACTTTGTGAAGAGCGCAT 59.261 45.455 11.47 0.00 40.12 4.73
594 600 2.135139 CACTACTTTGTGAAGAGCGCA 58.865 47.619 11.47 0.00 40.12 6.09
595 601 2.404215 TCACTACTTTGTGAAGAGCGC 58.596 47.619 0.00 0.00 43.08 5.92
630 636 9.174166 GCTTTGTACTCCCTTCATAAAGAAATA 57.826 33.333 0.00 0.00 35.40 1.40
631 637 7.669722 TGCTTTGTACTCCCTTCATAAAGAAAT 59.330 33.333 0.00 0.00 35.40 2.17
632 638 7.001674 TGCTTTGTACTCCCTTCATAAAGAAA 58.998 34.615 0.00 0.00 35.40 2.52
633 639 6.539173 TGCTTTGTACTCCCTTCATAAAGAA 58.461 36.000 0.00 0.00 34.14 2.52
634 640 6.121776 TGCTTTGTACTCCCTTCATAAAGA 57.878 37.500 0.00 0.00 34.14 2.52
635 641 5.355350 CCTGCTTTGTACTCCCTTCATAAAG 59.645 44.000 0.00 0.00 0.00 1.85
636 642 5.013704 TCCTGCTTTGTACTCCCTTCATAAA 59.986 40.000 0.00 0.00 0.00 1.40
637 643 4.534500 TCCTGCTTTGTACTCCCTTCATAA 59.466 41.667 0.00 0.00 0.00 1.90
638 644 4.101114 TCCTGCTTTGTACTCCCTTCATA 58.899 43.478 0.00 0.00 0.00 2.15
641 647 3.055094 TCATCCTGCTTTGTACTCCCTTC 60.055 47.826 0.00 0.00 0.00 3.46
644 650 3.010420 GTTCATCCTGCTTTGTACTCCC 58.990 50.000 0.00 0.00 0.00 4.30
645 651 2.673368 CGTTCATCCTGCTTTGTACTCC 59.327 50.000 0.00 0.00 0.00 3.85
646 652 2.673368 CCGTTCATCCTGCTTTGTACTC 59.327 50.000 0.00 0.00 0.00 2.59
648 654 1.130561 GCCGTTCATCCTGCTTTGTAC 59.869 52.381 0.00 0.00 0.00 2.90
651 657 1.135315 CGCCGTTCATCCTGCTTTG 59.865 57.895 0.00 0.00 0.00 2.77
656 662 1.811266 CTCCACGCCGTTCATCCTG 60.811 63.158 0.00 0.00 0.00 3.86
658 664 3.195698 GCTCCACGCCGTTCATCC 61.196 66.667 0.00 0.00 0.00 3.51
669 675 1.000843 GATTGTTTGGGTTGGCTCCAC 59.999 52.381 0.00 0.00 33.43 4.02
671 677 0.608130 GGATTGTTTGGGTTGGCTCC 59.392 55.000 0.00 0.00 0.00 4.70
672 678 0.243636 CGGATTGTTTGGGTTGGCTC 59.756 55.000 0.00 0.00 0.00 4.70
675 681 0.239879 CGTCGGATTGTTTGGGTTGG 59.760 55.000 0.00 0.00 0.00 3.77
676 682 1.196808 CTCGTCGGATTGTTTGGGTTG 59.803 52.381 0.00 0.00 0.00 3.77
677 683 1.202722 ACTCGTCGGATTGTTTGGGTT 60.203 47.619 0.00 0.00 0.00 4.11
680 686 4.735662 TTTTACTCGTCGGATTGTTTGG 57.264 40.909 0.00 0.00 0.00 3.28
701 716 1.664965 GTCGGCAGAGCTCACGTTT 60.665 57.895 17.77 0.00 0.00 3.60
704 719 2.874010 ATTCGTCGGCAGAGCTCACG 62.874 60.000 17.77 16.32 35.84 4.35
705 720 0.100682 TATTCGTCGGCAGAGCTCAC 59.899 55.000 17.77 7.40 0.00 3.51
707 722 1.065701 TCTTATTCGTCGGCAGAGCTC 59.934 52.381 5.27 5.27 0.00 4.09
713 728 1.722464 CGTGTTTCTTATTCGTCGGCA 59.278 47.619 0.00 0.00 0.00 5.69
716 731 2.915463 AGCTCGTGTTTCTTATTCGTCG 59.085 45.455 0.00 0.00 0.00 5.12
717 732 4.030753 CAGAGCTCGTGTTTCTTATTCGTC 59.969 45.833 8.37 0.00 0.00 4.20
719 734 3.241804 GCAGAGCTCGTGTTTCTTATTCG 60.242 47.826 8.37 0.00 0.00 3.34
721 736 3.003480 GGCAGAGCTCGTGTTTCTTATT 58.997 45.455 8.37 0.00 0.00 1.40
722 737 2.622436 GGCAGAGCTCGTGTTTCTTAT 58.378 47.619 8.37 0.00 0.00 1.73
723 738 1.668919 CGGCAGAGCTCGTGTTTCTTA 60.669 52.381 8.37 0.00 0.00 2.10
724 739 0.946221 CGGCAGAGCTCGTGTTTCTT 60.946 55.000 8.37 0.00 0.00 2.52
725 740 1.373497 CGGCAGAGCTCGTGTTTCT 60.373 57.895 8.37 0.00 0.00 2.52
726 741 1.372997 TCGGCAGAGCTCGTGTTTC 60.373 57.895 8.37 1.80 0.00 2.78
727 742 1.664965 GTCGGCAGAGCTCGTGTTT 60.665 57.895 8.37 0.00 0.00 2.83
728 743 2.049063 GTCGGCAGAGCTCGTGTT 60.049 61.111 8.37 0.00 0.00 3.32
729 744 2.363711 TTTGTCGGCAGAGCTCGTGT 62.364 55.000 8.37 0.00 0.00 4.49
730 745 1.621301 CTTTGTCGGCAGAGCTCGTG 61.621 60.000 8.37 8.35 0.00 4.35
731 746 1.373497 CTTTGTCGGCAGAGCTCGT 60.373 57.895 8.37 0.00 0.00 4.18
732 747 2.734673 GCTTTGTCGGCAGAGCTCG 61.735 63.158 23.89 4.60 45.88 5.03
733 748 3.172919 GCTTTGTCGGCAGAGCTC 58.827 61.111 23.89 5.27 45.88 4.09
736 751 2.476854 GCTAAATGCTTTGTCGGCAGAG 60.477 50.000 2.64 2.64 43.15 3.35
737 752 1.468520 GCTAAATGCTTTGTCGGCAGA 59.531 47.619 0.00 0.00 43.15 4.26
738 753 1.199789 TGCTAAATGCTTTGTCGGCAG 59.800 47.619 0.00 0.00 43.15 4.85
739 754 1.068610 GTGCTAAATGCTTTGTCGGCA 60.069 47.619 0.00 0.00 44.05 5.69
740 755 1.068610 TGTGCTAAATGCTTTGTCGGC 60.069 47.619 0.00 0.00 43.37 5.54
741 756 2.855180 CTGTGCTAAATGCTTTGTCGG 58.145 47.619 0.00 0.00 43.37 4.79
742 757 2.245096 GCTGTGCTAAATGCTTTGTCG 58.755 47.619 0.00 0.00 43.37 4.35
743 758 2.030007 TGGCTGTGCTAAATGCTTTGTC 60.030 45.455 0.00 0.00 43.37 3.18
744 759 1.962807 TGGCTGTGCTAAATGCTTTGT 59.037 42.857 0.00 0.00 43.37 2.83
745 760 2.728690 TGGCTGTGCTAAATGCTTTG 57.271 45.000 0.00 0.00 43.37 2.77
746 761 3.258872 TGAATGGCTGTGCTAAATGCTTT 59.741 39.130 0.00 0.00 43.37 3.51
753 768 4.580167 GGAATATGTGAATGGCTGTGCTAA 59.420 41.667 0.00 0.00 0.00 3.09
755 770 2.954318 GGAATATGTGAATGGCTGTGCT 59.046 45.455 0.00 0.00 0.00 4.40
761 776 6.347696 TGGAAATTTGGAATATGTGAATGGC 58.652 36.000 0.00 0.00 0.00 4.40
789 804 4.798924 GCTGGATGCATGGTTGTGTAAAAA 60.799 41.667 2.46 0.00 42.31 1.94
790 805 3.305950 GCTGGATGCATGGTTGTGTAAAA 60.306 43.478 2.46 0.00 42.31 1.52
791 806 2.230992 GCTGGATGCATGGTTGTGTAAA 59.769 45.455 2.46 0.00 42.31 2.01
792 807 1.818060 GCTGGATGCATGGTTGTGTAA 59.182 47.619 2.46 0.00 42.31 2.41
793 808 1.462616 GCTGGATGCATGGTTGTGTA 58.537 50.000 2.46 0.00 42.31 2.90
804 819 8.697846 TTACTACGTATATAATTGCTGGATGC 57.302 34.615 0.00 0.00 43.25 3.91
835 850 9.200817 ACCTTGTGGTAAAAGCATCATATAAAT 57.799 29.630 0.00 0.00 46.43 1.40
836 851 8.588290 ACCTTGTGGTAAAAGCATCATATAAA 57.412 30.769 0.00 0.00 46.43 1.40
861 1039 1.746861 CGCCCTGTAGCAATCATCCAA 60.747 52.381 0.00 0.00 0.00 3.53
867 1045 2.902343 GGCCGCCCTGTAGCAATC 60.902 66.667 0.00 0.00 0.00 2.67
879 1057 1.604278 GATAATTGTCCTTGAGGCCGC 59.396 52.381 0.00 0.00 34.44 6.53
880 1058 2.917933 TGATAATTGTCCTTGAGGCCG 58.082 47.619 0.00 0.00 34.44 6.13
881 1059 3.381590 GGTTGATAATTGTCCTTGAGGCC 59.618 47.826 0.00 0.00 34.44 5.19
884 1068 3.941483 AGCGGTTGATAATTGTCCTTGAG 59.059 43.478 0.00 0.00 0.00 3.02
973 1165 3.443045 CATCAAGGTGGCCACGGC 61.443 66.667 29.08 16.65 41.06 5.68
974 1166 3.443045 GCATCAAGGTGGCCACGG 61.443 66.667 29.08 20.37 0.00 4.94
980 1184 0.677731 ATGGACACGCATCAAGGTGG 60.678 55.000 0.00 0.00 38.46 4.61
1012 1216 2.359107 GTAGCAGCAGCACCAGCA 60.359 61.111 3.17 0.00 45.49 4.41
1013 1217 2.359107 TGTAGCAGCAGCACCAGC 60.359 61.111 3.17 0.00 45.49 4.85
1014 1218 3.571119 GTGTAGCAGCAGCACCAG 58.429 61.111 3.17 0.00 45.49 4.00
1017 1221 1.294659 GACAGGTGTAGCAGCAGCAC 61.295 60.000 3.17 9.98 45.49 4.40
1107 1314 4.886489 CCATCCTTTTCATCTTCTTCCCTC 59.114 45.833 0.00 0.00 0.00 4.30
1108 1315 4.293368 ACCATCCTTTTCATCTTCTTCCCT 59.707 41.667 0.00 0.00 0.00 4.20
1131 1344 1.048160 TCAGGTCAGTCAGTGGCACA 61.048 55.000 21.41 0.00 29.31 4.57
1245 1475 1.134401 CATGTGAAGGGATGCTACGGT 60.134 52.381 0.00 0.00 0.00 4.83
1269 1499 0.394899 GGAAGCAACCATGAGGAGGG 60.395 60.000 0.00 0.00 38.69 4.30
1270 1500 0.394899 GGGAAGCAACCATGAGGAGG 60.395 60.000 0.00 0.00 38.69 4.30
1271 1501 0.622665 AGGGAAGCAACCATGAGGAG 59.377 55.000 0.00 0.00 38.69 3.69
1272 1502 1.839994 CTAGGGAAGCAACCATGAGGA 59.160 52.381 0.00 0.00 38.69 3.71
1273 1503 2.338577 CTAGGGAAGCAACCATGAGG 57.661 55.000 0.00 0.00 42.21 3.86
1291 1542 0.334676 AGACTAGCCAGAGGAGTGCT 59.665 55.000 0.00 0.00 39.10 4.40
1302 1553 2.234908 AGATCACCACACAAGACTAGCC 59.765 50.000 0.00 0.00 0.00 3.93
1303 1554 3.516615 GAGATCACCACACAAGACTAGC 58.483 50.000 0.00 0.00 0.00 3.42
1310 1561 1.902508 GAGGAGGAGATCACCACACAA 59.097 52.381 12.05 0.00 0.00 3.33
1312 1563 0.827368 GGAGGAGGAGATCACCACAC 59.173 60.000 12.05 2.84 0.00 3.82
1317 1568 1.817740 CGAGGAGGAGGAGGAGATCAC 60.818 61.905 0.00 0.00 0.00 3.06
1318 1569 0.476338 CGAGGAGGAGGAGGAGATCA 59.524 60.000 0.00 0.00 0.00 2.92
1319 1570 0.251165 CCGAGGAGGAGGAGGAGATC 60.251 65.000 0.00 0.00 45.00 2.75
1320 1571 1.850549 CCGAGGAGGAGGAGGAGAT 59.149 63.158 0.00 0.00 45.00 2.75
1321 1572 3.063197 GCCGAGGAGGAGGAGGAGA 62.063 68.421 0.00 0.00 45.00 3.71
1322 1573 2.520741 GCCGAGGAGGAGGAGGAG 60.521 72.222 0.00 0.00 45.00 3.69
1323 1574 3.024356 AGCCGAGGAGGAGGAGGA 61.024 66.667 0.00 0.00 45.00 3.71
1324 1575 2.520741 GAGCCGAGGAGGAGGAGG 60.521 72.222 0.00 0.00 45.00 4.30
1325 1576 2.904866 CGAGCCGAGGAGGAGGAG 60.905 72.222 0.00 0.00 45.00 3.69
1326 1577 4.507916 CCGAGCCGAGGAGGAGGA 62.508 72.222 0.00 0.00 45.00 3.71
1327 1578 4.507916 TCCGAGCCGAGGAGGAGG 62.508 72.222 0.00 0.00 45.00 4.30
1351 1602 3.003480 GGGAAGAAGATGAAGAACCGTG 58.997 50.000 0.00 0.00 0.00 4.94
1352 1603 2.907042 AGGGAAGAAGATGAAGAACCGT 59.093 45.455 0.00 0.00 0.00 4.83
1380 1631 0.638746 CTTACCGACAATCGCGACAC 59.361 55.000 12.93 1.97 38.82 3.67
1381 1632 0.241749 ACTTACCGACAATCGCGACA 59.758 50.000 12.93 0.00 38.82 4.35
1394 1645 9.708092 ACAAGAGTAGAACAAGAATTACTTACC 57.292 33.333 0.00 0.00 37.03 2.85
1399 1654 9.262358 ACAAGACAAGAGTAGAACAAGAATTAC 57.738 33.333 0.00 0.00 0.00 1.89
1401 1656 8.738645 AACAAGACAAGAGTAGAACAAGAATT 57.261 30.769 0.00 0.00 0.00 2.17
1402 1657 8.738645 AAACAAGACAAGAGTAGAACAAGAAT 57.261 30.769 0.00 0.00 0.00 2.40
1411 1666 9.438291 CATGTTTGTAAAACAAGACAAGAGTAG 57.562 33.333 9.41 0.00 39.53 2.57
1420 1675 8.734218 TGTACTACCATGTTTGTAAAACAAGA 57.266 30.769 9.41 0.00 39.53 3.02
1428 1707 8.911918 AGACAATTTGTACTACCATGTTTGTA 57.088 30.769 1.15 0.00 0.00 2.41
1429 1708 7.719633 AGAGACAATTTGTACTACCATGTTTGT 59.280 33.333 1.15 0.00 0.00 2.83
1430 1709 8.017373 CAGAGACAATTTGTACTACCATGTTTG 58.983 37.037 1.15 0.00 0.00 2.93
1433 1716 6.173339 CCAGAGACAATTTGTACTACCATGT 58.827 40.000 1.15 0.00 0.00 3.21
1437 1720 4.935808 CCACCAGAGACAATTTGTACTACC 59.064 45.833 1.15 0.00 0.00 3.18
1438 1721 4.392138 GCCACCAGAGACAATTTGTACTAC 59.608 45.833 1.15 0.00 0.00 2.73
1441 1724 2.159627 CGCCACCAGAGACAATTTGTAC 59.840 50.000 1.15 0.42 0.00 2.90
1447 1730 0.110486 AAACCGCCACCAGAGACAAT 59.890 50.000 0.00 0.00 0.00 2.71
1461 1744 4.481112 GCTGGGCATGCGAAACCG 62.481 66.667 12.44 5.10 0.00 4.44
1464 1747 2.751436 GGAGCTGGGCATGCGAAA 60.751 61.111 12.44 0.00 35.28 3.46
1498 1784 8.100791 ACCATTGTTACTACATTTCTCTTGCTA 58.899 33.333 0.00 0.00 33.44 3.49
1500 1786 7.094805 TGACCATTGTTACTACATTTCTCTTGC 60.095 37.037 0.00 0.00 33.44 4.01
1501 1787 8.322906 TGACCATTGTTACTACATTTCTCTTG 57.677 34.615 0.00 0.00 33.44 3.02
1503 1789 7.907389 TCTGACCATTGTTACTACATTTCTCT 58.093 34.615 0.00 0.00 33.44 3.10
1504 1790 8.443937 GTTCTGACCATTGTTACTACATTTCTC 58.556 37.037 0.00 0.00 33.44 2.87
1550 1841 3.660865 ACCAACGTAGAACAGGATTGTC 58.339 45.455 0.00 0.00 36.23 3.18
1551 1842 3.764237 ACCAACGTAGAACAGGATTGT 57.236 42.857 0.00 0.00 39.87 2.71
1556 1847 3.930848 GTCCAATACCAACGTAGAACAGG 59.069 47.826 0.00 0.00 0.00 4.00
1570 1888 2.489938 TGTTCCTGCTGGTCCAATAC 57.510 50.000 9.73 1.25 34.23 1.89
1572 1890 2.357154 GGTATGTTCCTGCTGGTCCAAT 60.357 50.000 9.73 2.91 34.23 3.16
1574 1892 0.618458 GGTATGTTCCTGCTGGTCCA 59.382 55.000 9.73 7.85 34.23 4.02
1575 1893 0.618458 TGGTATGTTCCTGCTGGTCC 59.382 55.000 9.73 2.23 34.23 4.46
1576 1894 2.489938 TTGGTATGTTCCTGCTGGTC 57.510 50.000 9.73 5.24 34.23 4.02
1577 1895 2.308570 TGATTGGTATGTTCCTGCTGGT 59.691 45.455 9.73 0.00 34.23 4.00
1578 1896 2.947652 CTGATTGGTATGTTCCTGCTGG 59.052 50.000 2.58 2.58 0.00 4.85
1582 1900 5.066893 CCATGTTCTGATTGGTATGTTCCTG 59.933 44.000 0.00 0.00 0.00 3.86
1583 1901 5.195940 CCATGTTCTGATTGGTATGTTCCT 58.804 41.667 0.00 0.00 0.00 3.36
1584 1902 4.949856 ACCATGTTCTGATTGGTATGTTCC 59.050 41.667 5.85 0.00 41.88 3.62
1585 1903 5.647658 TGACCATGTTCTGATTGGTATGTTC 59.352 40.000 7.25 0.00 43.67 3.18
1599 1917 1.273048 TGGCTGCAAATGACCATGTTC 59.727 47.619 0.50 0.00 0.00 3.18
1606 1924 4.708726 ATTAGAGTTGGCTGCAAATGAC 57.291 40.909 0.50 0.00 0.00 3.06
1625 1943 5.446143 TGCGGTTAGATGAACAAACAATT 57.554 34.783 0.00 0.00 40.09 2.32
1643 1963 1.303799 ATTTCTGCACTCTGCTGCGG 61.304 55.000 0.95 0.95 45.31 5.69
1644 1964 0.520404 AATTTCTGCACTCTGCTGCG 59.480 50.000 0.00 0.00 45.31 5.18
1660 1980 1.039856 AAGCGTGGTGGCAGAAAATT 58.960 45.000 0.00 0.00 34.64 1.82
1670 1990 2.050714 CAGCAAGCAAGCGTGGTG 60.051 61.111 21.53 21.53 44.25 4.17
1689 2009 2.042162 AGTTCATGGTGCCAATCCTCTT 59.958 45.455 0.00 0.00 0.00 2.85
1690 2010 1.637553 AGTTCATGGTGCCAATCCTCT 59.362 47.619 0.00 0.00 0.00 3.69
1698 2035 1.398390 GTTCGATCAGTTCATGGTGCC 59.602 52.381 0.00 0.00 0.00 5.01
1713 2050 1.570813 CAGCAGTGTGAGTTGTTCGA 58.429 50.000 0.00 0.00 0.00 3.71
1714 2051 0.041839 GCAGCAGTGTGAGTTGTTCG 60.042 55.000 0.00 0.00 0.00 3.95
1715 2052 0.308993 GGCAGCAGTGTGAGTTGTTC 59.691 55.000 0.00 0.00 0.00 3.18
1716 2053 1.439353 CGGCAGCAGTGTGAGTTGTT 61.439 55.000 0.00 0.00 0.00 2.83
1725 2062 0.676466 TCAATTACCCGGCAGCAGTG 60.676 55.000 0.00 0.00 0.00 3.66
1729 2066 1.032114 AAGCTCAATTACCCGGCAGC 61.032 55.000 0.00 0.00 0.00 5.25
1740 2077 0.036577 ACTGCGCTCTGAAGCTCAAT 60.037 50.000 9.73 0.00 46.91 2.57
1743 2080 1.135257 TCTAACTGCGCTCTGAAGCTC 60.135 52.381 9.73 0.00 46.91 4.09
1745 2082 1.658095 CTTCTAACTGCGCTCTGAAGC 59.342 52.381 9.73 0.00 45.56 3.86
1754 2091 2.096417 CGGTGGTTTTCTTCTAACTGCG 60.096 50.000 0.00 0.00 0.00 5.18
1759 2096 5.540400 TTCTCTCGGTGGTTTTCTTCTAA 57.460 39.130 0.00 0.00 0.00 2.10
1804 2146 1.393603 TCTCCTGGATCTGTGTAGCG 58.606 55.000 0.00 0.00 0.00 4.26
1819 2161 1.000274 GTGCACCCAACATTGTTCTCC 60.000 52.381 5.22 0.00 0.00 3.71
1891 2233 1.376466 GCTCCCTTGCTTCCTGTCA 59.624 57.895 0.00 0.00 0.00 3.58
1934 2276 5.491982 ACATTTAAGAGAAGCAGTACCAGG 58.508 41.667 0.00 0.00 0.00 4.45
1954 2296 9.681062 AACTAATATAGCTGTTGGTTTGTACAT 57.319 29.630 0.00 0.00 0.00 2.29
2209 2561 5.068198 CAGGGTGTTACTAGAAGCGGTATAA 59.932 44.000 0.00 0.00 0.00 0.98
2210 2562 4.581824 CAGGGTGTTACTAGAAGCGGTATA 59.418 45.833 0.00 0.00 0.00 1.47
2211 2563 3.383825 CAGGGTGTTACTAGAAGCGGTAT 59.616 47.826 0.00 0.00 0.00 2.73
2212 2564 2.756760 CAGGGTGTTACTAGAAGCGGTA 59.243 50.000 0.00 0.00 0.00 4.02
2213 2565 1.549170 CAGGGTGTTACTAGAAGCGGT 59.451 52.381 0.00 0.00 0.00 5.68
2214 2566 1.739371 GCAGGGTGTTACTAGAAGCGG 60.739 57.143 0.00 0.00 0.00 5.52
2215 2567 1.204941 AGCAGGGTGTTACTAGAAGCG 59.795 52.381 0.00 0.00 0.00 4.68
2216 2568 3.003480 CAAGCAGGGTGTTACTAGAAGC 58.997 50.000 0.00 0.00 0.00 3.86
2217 2569 3.008049 ACCAAGCAGGGTGTTACTAGAAG 59.992 47.826 0.00 0.00 43.89 2.85
2218 2570 2.976882 ACCAAGCAGGGTGTTACTAGAA 59.023 45.455 0.00 0.00 43.89 2.10
2219 2571 2.616524 ACCAAGCAGGGTGTTACTAGA 58.383 47.619 0.00 0.00 43.89 2.43
2220 2572 3.418684 AACCAAGCAGGGTGTTACTAG 57.581 47.619 0.00 0.00 41.32 2.57
2481 2859 3.976942 CAGAATCAAGTTGGCACTTTTCG 59.023 43.478 2.34 0.00 40.66 3.46
2567 2945 2.396590 TATCCGGACTGCTGTTTTCC 57.603 50.000 6.12 0.00 0.00 3.13
2684 3064 2.447244 AAGCTTGAACAGAGTCTCCG 57.553 50.000 0.00 0.00 0.00 4.63
2686 3066 7.172361 ACAATAGAAAAGCTTGAACAGAGTCTC 59.828 37.037 0.00 0.00 0.00 3.36
2717 3097 5.570262 TCGACATGCAGCGTAAATATTAC 57.430 39.130 0.00 0.00 0.00 1.89
2718 3098 6.256975 AGTTTCGACATGCAGCGTAAATATTA 59.743 34.615 0.00 0.00 0.00 0.98
2719 3099 5.064707 AGTTTCGACATGCAGCGTAAATATT 59.935 36.000 0.00 0.00 0.00 1.28
2807 3574 4.349663 TCTTTTGACAGTTGGTTTCGTG 57.650 40.909 0.00 0.00 0.00 4.35
2942 3709 0.744281 CCTTTGGTTTGCTGTTCGGT 59.256 50.000 0.00 0.00 0.00 4.69
3046 3813 1.340405 GCTCAAGGCCATCTTCTTCCA 60.340 52.381 5.01 0.00 32.41 3.53
3148 3915 8.043710 GGATAATGGACTCTAATTCAGGGTATG 58.956 40.741 0.00 0.00 38.45 2.39
3222 3989 0.038526 TCGCTCACCGGAGTTTTCTC 60.039 55.000 9.46 0.00 43.37 2.87
3230 3997 1.292223 CTTTTCCTCGCTCACCGGA 59.708 57.895 9.46 0.00 37.59 5.14
3267 4034 5.221106 CCCCTACATGTCTGTTGCAAATATG 60.221 44.000 0.00 2.58 36.79 1.78
3426 4193 1.542472 TGATGCATGTGTTCTGCTTGG 59.458 47.619 2.46 0.00 40.34 3.61
3444 4211 2.813907 CTGAGAAGACCTTCCCTCTGA 58.186 52.381 6.17 0.00 40.33 3.27
3449 4216 0.251634 CTGGCTGAGAAGACCTTCCC 59.748 60.000 6.17 1.86 40.33 3.97
3488 4255 1.661341 CTCTCCTTGGATTCGGCTTG 58.339 55.000 0.00 0.00 0.00 4.01
3494 4261 3.356529 TCAAAGCCTCTCCTTGGATTC 57.643 47.619 0.00 0.00 31.35 2.52
3523 4290 3.801114 AGTATGTCGATGCAGTTGCTA 57.199 42.857 5.62 0.00 42.66 3.49
3541 4308 3.264193 TCCACCTGATTGCTGATGTAAGT 59.736 43.478 0.00 0.00 0.00 2.24
3545 4312 2.885135 TTCCACCTGATTGCTGATGT 57.115 45.000 0.00 0.00 0.00 3.06
3550 4317 2.494870 GCTTGAATTCCACCTGATTGCT 59.505 45.455 2.27 0.00 0.00 3.91
3902 4669 5.605534 CCAGTATGAGTATTGTCCTTCAGG 58.394 45.833 0.00 0.00 39.69 3.86
3927 4694 5.152623 TGAACTGAAGGACTTGGATACTG 57.847 43.478 0.00 0.00 37.61 2.74
3941 4708 2.368875 GGACCTTGAGACCTGAACTGAA 59.631 50.000 0.00 0.00 0.00 3.02
3942 4709 1.971357 GGACCTTGAGACCTGAACTGA 59.029 52.381 0.00 0.00 0.00 3.41
4156 4935 3.709987 GCTTGTTCAACTGTTGCTTCAT 58.290 40.909 15.52 0.00 0.00 2.57
4166 4945 3.126001 TCTTGATCCGCTTGTTCAACT 57.874 42.857 0.00 0.00 31.15 3.16
4343 5122 0.734889 ATTCCGAATTGCTTGCGAGG 59.265 50.000 2.37 0.00 0.00 4.63
4391 5174 5.489792 ACATACTGGGGCTGAGTAATATG 57.510 43.478 1.22 0.00 29.82 1.78
4396 5179 2.827755 TGAACATACTGGGGCTGAGTA 58.172 47.619 0.00 0.00 0.00 2.59
4402 5185 2.489938 TGTCTTGAACATACTGGGGC 57.510 50.000 0.00 0.00 31.20 5.80
4758 5553 7.749666 AGGTCAATGGTAAGCATACATTAGAT 58.250 34.615 1.01 0.00 33.45 1.98
4809 5604 8.434589 TTTTGGGAGATGAAACCATTAGATTT 57.565 30.769 0.00 0.00 33.63 2.17
4960 5760 3.963374 TGCATAGTTCTGATAGCTCCAGT 59.037 43.478 13.65 1.04 33.57 4.00
4985 5785 8.184304 AGATACCATACATCTAAGTTCTGGTC 57.816 38.462 0.00 0.00 37.45 4.02
5033 5833 1.032014 TGCAGTTCTTCAAACAGGCC 58.968 50.000 0.00 0.00 0.00 5.19
5268 6068 3.708451 TCCAGATCCACACTAACTAGCA 58.292 45.455 0.00 0.00 0.00 3.49
5299 6099 2.529632 TCCGATCGGAGATTCATCCAT 58.470 47.619 32.59 0.00 45.12 3.41
5388 6188 4.502259 CCCTGATAGACTGTATCCACAAGC 60.502 50.000 0.00 0.00 33.22 4.01
5399 6199 2.363680 AGTTGATCGCCCTGATAGACTG 59.636 50.000 0.00 0.00 37.47 3.51
5430 6230 6.573664 AATACTCAAATTAGCAAGCACACA 57.426 33.333 0.00 0.00 0.00 3.72
5505 6306 1.074566 AGCTTTCTTCACAAGAGGGGG 59.925 52.381 0.00 0.00 39.03 5.40
5507 6308 3.480470 TCAAGCTTTCTTCACAAGAGGG 58.520 45.455 0.00 0.00 39.03 4.30
5508 6309 5.936956 ACTATCAAGCTTTCTTCACAAGAGG 59.063 40.000 0.00 0.00 39.03 3.69
5509 6310 6.426328 ACACTATCAAGCTTTCTTCACAAGAG 59.574 38.462 0.00 0.00 39.03 2.85
5510 6311 6.203530 CACACTATCAAGCTTTCTTCACAAGA 59.796 38.462 0.00 0.00 35.26 3.02
5511 6312 6.369005 CACACTATCAAGCTTTCTTCACAAG 58.631 40.000 0.00 0.00 0.00 3.16
5512 6313 5.277974 GCACACTATCAAGCTTTCTTCACAA 60.278 40.000 0.00 0.00 0.00 3.33
5513 6314 4.214119 GCACACTATCAAGCTTTCTTCACA 59.786 41.667 0.00 0.00 0.00 3.58
5514 6315 4.214119 TGCACACTATCAAGCTTTCTTCAC 59.786 41.667 0.00 0.00 0.00 3.18
5515 6316 4.388485 TGCACACTATCAAGCTTTCTTCA 58.612 39.130 0.00 0.00 0.00 3.02
5516 6317 4.671250 GCTGCACACTATCAAGCTTTCTTC 60.671 45.833 0.00 0.00 0.00 2.87
5517 6318 3.190118 GCTGCACACTATCAAGCTTTCTT 59.810 43.478 0.00 0.00 0.00 2.52
5518 6319 2.746362 GCTGCACACTATCAAGCTTTCT 59.254 45.455 0.00 0.00 0.00 2.52
5519 6320 2.746362 AGCTGCACACTATCAAGCTTTC 59.254 45.455 1.02 0.00 0.00 2.62
5520 6321 2.486982 CAGCTGCACACTATCAAGCTTT 59.513 45.455 0.00 0.00 0.00 3.51
5521 6322 2.082231 CAGCTGCACACTATCAAGCTT 58.918 47.619 0.00 0.00 0.00 3.74
5522 6323 1.277273 TCAGCTGCACACTATCAAGCT 59.723 47.619 9.47 0.00 0.00 3.74
5523 6324 1.396301 GTCAGCTGCACACTATCAAGC 59.604 52.381 9.47 0.00 0.00 4.01
5545 6346 4.072131 AGGCACAAGAACAACATCGTAAT 58.928 39.130 0.00 0.00 0.00 1.89
5609 6417 6.954944 TGACAGTATTTTGCACAACTAACTC 58.045 36.000 0.00 0.00 0.00 3.01
5706 6519 2.880890 GGGTATGACTGGAATGCATGAC 59.119 50.000 0.00 0.00 0.00 3.06
5711 6524 4.460263 TGTTATGGGTATGACTGGAATGC 58.540 43.478 0.00 0.00 0.00 3.56
5768 6608 7.402054 TGGGTATGTTCTGTTCTATCATGTTT 58.598 34.615 0.00 0.00 0.00 2.83
5849 6692 2.301583 TCGGTTGATTGGTGACTGATCA 59.698 45.455 0.00 0.00 33.71 2.92
5941 6807 0.251832 TCTGTGGAGGAGGACAGGTC 60.252 60.000 0.00 0.00 40.11 3.85
5957 6823 0.761802 GGCTAGTGGAAGGGGATCTG 59.238 60.000 0.00 0.00 0.00 2.90
6012 6893 2.202146 CTCACCGACGACGACGAC 60.202 66.667 20.63 7.02 42.66 4.34
6183 7064 1.840737 CGAAGGGAGAAGAGAGGACA 58.159 55.000 0.00 0.00 0.00 4.02
6404 7286 2.954868 CGATGCAGCCGTCGTACC 60.955 66.667 0.00 0.00 43.65 3.34
6424 7306 2.258591 CCCGGCCGAGATCATACG 59.741 66.667 30.73 5.91 0.00 3.06
6480 7365 3.683340 GGATTCGAGGGTGTAAGTTTCAC 59.317 47.826 4.16 4.16 35.36 3.18
6494 7379 6.148480 AGTGAAGTTCAAATTGAGGATTCGAG 59.852 38.462 7.25 0.00 0.00 4.04
6496 7381 6.246420 AGTGAAGTTCAAATTGAGGATTCG 57.754 37.500 7.25 0.00 0.00 3.34
6516 7401 0.863144 GCAGTGCAATGCCAAAAGTG 59.137 50.000 27.88 0.00 40.43 3.16
6565 7466 2.162208 ACATGCGATAAGGTGCAAACAG 59.838 45.455 0.00 0.00 45.45 3.16
6590 7497 4.527564 CCATGAAGAATAATCCGCGAAAC 58.472 43.478 8.23 0.00 0.00 2.78
6645 7652 4.390603 TGTCACGATTATCCGGTTCAAAAG 59.609 41.667 0.00 0.00 0.00 2.27
6649 7656 3.812156 ATGTCACGATTATCCGGTTCA 57.188 42.857 0.00 0.00 0.00 3.18
6699 7706 7.959733 TCATTCACATGTCGTTTACTGAATAC 58.040 34.615 0.00 0.00 31.96 1.89
6754 11164 9.797642 TTTTATCATCCTTGCATATAGATGTGT 57.202 29.630 12.63 7.86 37.84 3.72
6770 11220 7.503566 TCTCCAATTGTGATCCTTTTATCATCC 59.496 37.037 4.43 0.00 38.13 3.51
6785 11236 0.734889 GGACGCCATCTCCAATTGTG 59.265 55.000 4.43 0.00 0.00 3.33
6847 11298 1.064758 TCCCTCGCAATAAGGTGCAAT 60.065 47.619 0.00 0.00 45.19 3.56
6926 11377 2.512515 GCGCTCGGAGAAGCCATT 60.513 61.111 9.69 0.00 34.84 3.16
6971 11422 2.558313 GCGCAGAAGGTGAAGCAC 59.442 61.111 0.30 0.00 33.18 4.40
7029 11480 0.815734 TACCAGTACTCCTTGCTCGC 59.184 55.000 0.00 0.00 0.00 5.03
7036 11487 4.417183 TGGATCTCATCTACCAGTACTCCT 59.583 45.833 0.00 0.00 0.00 3.69
7055 11506 1.679944 GCGCCCTACATATGCATGGAT 60.680 52.381 10.16 4.68 36.39 3.41
7064 11515 4.274700 GCCGACGCGCCCTACATA 62.275 66.667 5.73 0.00 0.00 2.29
7178 11629 1.069765 CGACAGTGAGGCCACAAGT 59.930 57.895 3.76 6.85 45.54 3.16
7208 11659 4.592351 AGCTTCTACTACATGGCATCAGAT 59.408 41.667 11.56 0.00 0.00 2.90
7213 11664 3.041211 TCCAGCTTCTACTACATGGCAT 58.959 45.455 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.