Multiple sequence alignment - TraesCS4D01G354000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G354000 chr4D 100.000 2895 0 0 1 2895 504111054 504108160 0.000000e+00 5347.0
1 TraesCS4D01G354000 chr4D 91.525 531 25 9 2383 2895 115132016 115131488 0.000000e+00 713.0
2 TraesCS4D01G354000 chr4D 91.619 525 26 8 2383 2895 176600351 176600869 0.000000e+00 710.0
3 TraesCS4D01G354000 chr4D 98.214 56 1 0 635 690 504110365 504110310 6.600000e-17 99.0
4 TraesCS4D01G354000 chr4D 98.214 56 1 0 690 745 504110420 504110365 6.600000e-17 99.0
5 TraesCS4D01G354000 chr4B 90.737 950 42 14 1016 1929 650697220 650696281 0.000000e+00 1225.0
6 TraesCS4D01G354000 chr4B 91.655 707 37 10 1 690 650698819 650698118 0.000000e+00 959.0
7 TraesCS4D01G354000 chr4B 92.661 327 19 2 690 1012 650698173 650697848 1.570000e-127 466.0
8 TraesCS4D01G354000 chr5A 87.706 911 45 34 1016 1870 688784064 688783165 0.000000e+00 1000.0
9 TraesCS4D01G354000 chr5A 77.634 541 51 25 92 604 688785371 688784873 6.150000e-67 265.0
10 TraesCS4D01G354000 chr5D 91.978 536 26 7 2371 2895 520899313 520899842 0.000000e+00 736.0
11 TraesCS4D01G354000 chr2D 91.794 524 25 8 2382 2895 240218334 240218849 0.000000e+00 713.0
12 TraesCS4D01G354000 chr2D 97.222 36 1 0 2334 2369 425705006 425705041 8.660000e-06 62.1
13 TraesCS4D01G354000 chr1D 91.778 523 26 4 2383 2895 118575086 118575601 0.000000e+00 712.0
14 TraesCS4D01G354000 chr3A 91.587 523 27 7 2383 2895 513527072 513527587 0.000000e+00 706.0
15 TraesCS4D01G354000 chr5B 91.171 521 31 5 2384 2894 538577664 538577149 0.000000e+00 693.0
16 TraesCS4D01G354000 chr1B 90.996 522 36 3 2383 2894 527625591 527626111 0.000000e+00 693.0
17 TraesCS4D01G354000 chr1B 89.677 155 7 3 2382 2527 654866545 654866699 3.810000e-44 189.0
18 TraesCS4D01G354000 chr2B 90.769 520 36 4 2379 2888 689745713 689746230 0.000000e+00 684.0
19 TraesCS4D01G354000 chr2B 90.038 522 41 5 2383 2894 335418288 335417768 0.000000e+00 665.0
20 TraesCS4D01G354000 chr2B 89.349 169 6 5 2382 2538 9630847 9630679 4.890000e-48 202.0
21 TraesCS4D01G354000 chr2B 89.937 159 6 5 2379 2527 689749798 689749640 2.280000e-46 196.0
22 TraesCS4D01G354000 chr7B 86.142 534 35 18 2372 2894 687674258 687674763 9.130000e-150 540.0
23 TraesCS4D01G354000 chr7B 90.323 155 6 2 2382 2527 687677620 687677466 8.190000e-46 195.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G354000 chr4D 504108160 504111054 2894 True 1848.333333 5347 98.809333 1 2895 3 chr4D.!!$R2 2894
1 TraesCS4D01G354000 chr4D 115131488 115132016 528 True 713.000000 713 91.525000 2383 2895 1 chr4D.!!$R1 512
2 TraesCS4D01G354000 chr4D 176600351 176600869 518 False 710.000000 710 91.619000 2383 2895 1 chr4D.!!$F1 512
3 TraesCS4D01G354000 chr4B 650696281 650698819 2538 True 883.333333 1225 91.684333 1 1929 3 chr4B.!!$R1 1928
4 TraesCS4D01G354000 chr5A 688783165 688785371 2206 True 632.500000 1000 82.670000 92 1870 2 chr5A.!!$R1 1778
5 TraesCS4D01G354000 chr5D 520899313 520899842 529 False 736.000000 736 91.978000 2371 2895 1 chr5D.!!$F1 524
6 TraesCS4D01G354000 chr2D 240218334 240218849 515 False 713.000000 713 91.794000 2382 2895 1 chr2D.!!$F1 513
7 TraesCS4D01G354000 chr1D 118575086 118575601 515 False 712.000000 712 91.778000 2383 2895 1 chr1D.!!$F1 512
8 TraesCS4D01G354000 chr3A 513527072 513527587 515 False 706.000000 706 91.587000 2383 2895 1 chr3A.!!$F1 512
9 TraesCS4D01G354000 chr5B 538577149 538577664 515 True 693.000000 693 91.171000 2384 2894 1 chr5B.!!$R1 510
10 TraesCS4D01G354000 chr1B 527625591 527626111 520 False 693.000000 693 90.996000 2383 2894 1 chr1B.!!$F1 511
11 TraesCS4D01G354000 chr2B 689745713 689746230 517 False 684.000000 684 90.769000 2379 2888 1 chr2B.!!$F1 509
12 TraesCS4D01G354000 chr2B 335417768 335418288 520 True 665.000000 665 90.038000 2383 2894 1 chr2B.!!$R2 511
13 TraesCS4D01G354000 chr7B 687674258 687674763 505 False 540.000000 540 86.142000 2372 2894 1 chr7B.!!$F1 522

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
693 742 0.395586 TTCTTGGCCTGTGCTTGTGT 60.396 50.0 3.32 0.0 37.74 3.72 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2201 3005 0.034896 TCCTCGCCTCTGTTTGGAAC 59.965 55.0 0.0 0.0 0.0 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 8.485392 TGATACAATAGGTTTCACATGATCAGA 58.515 33.333 0.00 0.00 33.33 3.27
37 38 6.715280 ACAATAGGTTTCACATGATCAGACT 58.285 36.000 0.00 0.00 0.00 3.24
42 43 6.950842 AGGTTTCACATGATCAGACTATGAA 58.049 36.000 0.00 3.94 42.53 2.57
63 68 6.106673 TGAATAGTAGCCTTGAAGTAGCAAC 58.893 40.000 0.00 0.00 0.00 4.17
64 69 3.336138 AGTAGCCTTGAAGTAGCAACC 57.664 47.619 0.00 0.00 0.00 3.77
65 70 2.000447 GTAGCCTTGAAGTAGCAACCG 59.000 52.381 0.00 0.00 0.00 4.44
132 138 2.403252 AATCGTTGGGTGGATCAGAC 57.597 50.000 0.00 0.00 0.00 3.51
214 221 2.591753 CTGACCGATGTGGGGCAT 59.408 61.111 0.00 0.00 46.23 4.40
228 235 2.788807 TGGGGCATATTGGTAATGGAGT 59.211 45.455 0.00 0.00 0.00 3.85
264 291 4.286297 TGTAGCATAACAGAGCTTGGTT 57.714 40.909 8.69 8.69 42.05 3.67
265 292 4.002982 TGTAGCATAACAGAGCTTGGTTG 58.997 43.478 12.61 1.51 42.05 3.77
266 293 3.146104 AGCATAACAGAGCTTGGTTGT 57.854 42.857 12.61 4.90 38.01 3.32
267 294 4.286297 AGCATAACAGAGCTTGGTTGTA 57.714 40.909 12.61 0.00 38.01 2.41
268 295 4.003648 AGCATAACAGAGCTTGGTTGTAC 58.996 43.478 12.61 3.18 38.01 2.90
299 331 1.079266 CTGGGTGCTCTCAGTCAGC 60.079 63.158 7.52 0.00 37.40 4.26
412 453 5.927115 CAGTTCAGGGTAGAGTTTAGTTCAC 59.073 44.000 0.00 0.00 0.00 3.18
415 456 4.217118 TCAGGGTAGAGTTTAGTTCACGAC 59.783 45.833 0.00 0.00 0.00 4.34
502 549 2.820330 GCTCAGAACCTAGCTAGCTTG 58.180 52.381 24.88 21.01 35.80 4.01
526 573 3.149196 TGAGTGTTGGCTCAGGATTTTC 58.851 45.455 0.00 0.00 40.23 2.29
572 621 9.268268 GCTGCCAAACACTATGTAATATACTTA 57.732 33.333 0.00 0.00 0.00 2.24
604 653 7.120285 AGTGATATTCTGAATGGACACAACTTG 59.880 37.037 23.75 0.00 0.00 3.16
609 658 4.937620 TCTGAATGGACACAACTTGCTATC 59.062 41.667 0.00 0.00 0.00 2.08
622 671 7.699391 CACAACTTGCTATCAGTGATATTTTGG 59.301 37.037 13.22 2.97 0.00 3.28
626 675 6.564709 TGCTATCAGTGATATTTTGGATGC 57.435 37.500 13.22 10.70 0.00 3.91
682 731 6.207691 TGAACTTTGCTATAATTCTTGGCC 57.792 37.500 0.00 0.00 0.00 5.36
690 739 4.498682 GCTATAATTCTTGGCCTGTGCTTG 60.499 45.833 3.32 0.00 37.74 4.01
691 740 1.708341 AATTCTTGGCCTGTGCTTGT 58.292 45.000 3.32 0.00 37.74 3.16
692 741 0.963962 ATTCTTGGCCTGTGCTTGTG 59.036 50.000 3.32 0.00 37.74 3.33
693 742 0.395586 TTCTTGGCCTGTGCTTGTGT 60.396 50.000 3.32 0.00 37.74 3.72
694 743 0.395586 TCTTGGCCTGTGCTTGTGTT 60.396 50.000 3.32 0.00 37.74 3.32
695 744 1.133945 TCTTGGCCTGTGCTTGTGTTA 60.134 47.619 3.32 0.00 37.74 2.41
696 745 1.680735 CTTGGCCTGTGCTTGTGTTAA 59.319 47.619 3.32 0.00 37.74 2.01
697 746 1.993956 TGGCCTGTGCTTGTGTTAAT 58.006 45.000 3.32 0.00 37.74 1.40
698 747 3.147553 TGGCCTGTGCTTGTGTTAATA 57.852 42.857 3.32 0.00 37.74 0.98
699 748 3.081061 TGGCCTGTGCTTGTGTTAATAG 58.919 45.455 3.32 0.00 37.74 1.73
700 749 3.244735 TGGCCTGTGCTTGTGTTAATAGA 60.245 43.478 3.32 0.00 37.74 1.98
701 750 3.375299 GGCCTGTGCTTGTGTTAATAGAG 59.625 47.826 0.00 0.00 37.74 2.43
702 751 3.375299 GCCTGTGCTTGTGTTAATAGAGG 59.625 47.826 0.00 0.00 33.53 3.69
703 752 4.579869 CCTGTGCTTGTGTTAATAGAGGT 58.420 43.478 0.00 0.00 0.00 3.85
704 753 5.003804 CCTGTGCTTGTGTTAATAGAGGTT 58.996 41.667 0.00 0.00 0.00 3.50
705 754 5.106555 CCTGTGCTTGTGTTAATAGAGGTTG 60.107 44.000 0.00 0.00 0.00 3.77
706 755 5.616270 TGTGCTTGTGTTAATAGAGGTTGA 58.384 37.500 0.00 0.00 0.00 3.18
707 756 6.237901 TGTGCTTGTGTTAATAGAGGTTGAT 58.762 36.000 0.00 0.00 0.00 2.57
708 757 7.390823 TGTGCTTGTGTTAATAGAGGTTGATA 58.609 34.615 0.00 0.00 0.00 2.15
709 758 7.549134 TGTGCTTGTGTTAATAGAGGTTGATAG 59.451 37.037 0.00 0.00 0.00 2.08
710 759 7.549488 GTGCTTGTGTTAATAGAGGTTGATAGT 59.451 37.037 0.00 0.00 0.00 2.12
711 760 8.100791 TGCTTGTGTTAATAGAGGTTGATAGTT 58.899 33.333 0.00 0.00 0.00 2.24
712 761 8.391106 GCTTGTGTTAATAGAGGTTGATAGTTG 58.609 37.037 0.00 0.00 0.00 3.16
713 762 9.653287 CTTGTGTTAATAGAGGTTGATAGTTGA 57.347 33.333 0.00 0.00 0.00 3.18
715 764 9.599866 TGTGTTAATAGAGGTTGATAGTTGATG 57.400 33.333 0.00 0.00 0.00 3.07
716 765 9.817809 GTGTTAATAGAGGTTGATAGTTGATGA 57.182 33.333 0.00 0.00 0.00 2.92
721 770 9.965902 AATAGAGGTTGATAGTTGATGAACTTT 57.034 29.630 1.98 0.00 39.56 2.66
722 771 7.678947 AGAGGTTGATAGTTGATGAACTTTG 57.321 36.000 1.98 0.00 39.56 2.77
723 772 6.150140 AGAGGTTGATAGTTGATGAACTTTGC 59.850 38.462 1.98 0.00 39.56 3.68
724 773 6.006449 AGGTTGATAGTTGATGAACTTTGCT 58.994 36.000 1.98 0.00 39.56 3.91
725 774 7.168219 AGGTTGATAGTTGATGAACTTTGCTA 58.832 34.615 1.98 0.00 39.56 3.49
726 775 7.831193 AGGTTGATAGTTGATGAACTTTGCTAT 59.169 33.333 1.98 0.00 39.56 2.97
727 776 9.109393 GGTTGATAGTTGATGAACTTTGCTATA 57.891 33.333 1.98 0.00 39.56 1.31
735 784 9.294030 GTTGATGAACTTTGCTATAATTCTTGG 57.706 33.333 0.00 0.00 0.00 3.61
736 785 7.999679 TGATGAACTTTGCTATAATTCTTGGG 58.000 34.615 0.00 0.00 0.00 4.12
737 786 6.207691 TGAACTTTGCTATAATTCTTGGGC 57.792 37.500 0.00 0.00 0.00 5.36
738 787 5.951747 TGAACTTTGCTATAATTCTTGGGCT 59.048 36.000 0.00 0.00 0.00 5.19
739 788 5.841957 ACTTTGCTATAATTCTTGGGCTG 57.158 39.130 0.00 0.00 0.00 4.85
740 789 5.264395 ACTTTGCTATAATTCTTGGGCTGT 58.736 37.500 0.00 0.00 0.00 4.40
741 790 5.126061 ACTTTGCTATAATTCTTGGGCTGTG 59.874 40.000 0.00 0.00 0.00 3.66
742 791 2.951642 TGCTATAATTCTTGGGCTGTGC 59.048 45.455 0.00 0.00 0.00 4.57
743 792 3.217626 GCTATAATTCTTGGGCTGTGCT 58.782 45.455 0.00 0.00 0.00 4.40
744 793 3.633986 GCTATAATTCTTGGGCTGTGCTT 59.366 43.478 0.00 0.00 0.00 3.91
745 794 4.098501 GCTATAATTCTTGGGCTGTGCTTT 59.901 41.667 0.00 0.00 0.00 3.51
776 825 8.131100 CACTTTGTTGATTATATGAAAGGCGAT 58.869 33.333 0.00 0.00 0.00 4.58
780 829 8.669946 TGTTGATTATATGAAAGGCGATGTTA 57.330 30.769 0.00 0.00 0.00 2.41
815 868 4.438336 GCATCATCTGGAATTCATATGCCG 60.438 45.833 7.93 3.72 31.11 5.69
819 873 1.948834 CTGGAATTCATATGCCGTGCA 59.051 47.619 7.93 1.01 44.86 4.57
880 934 5.903010 TGTTATAGTCCAGATTAAGGGAGCA 59.097 40.000 0.00 0.00 32.85 4.26
888 942 5.612688 TCCAGATTAAGGGAGCAGGATTATT 59.387 40.000 0.00 0.00 0.00 1.40
911 965 5.245531 TCATCTGTTAACTGGCACCTAAAG 58.754 41.667 12.00 0.00 0.00 1.85
927 981 7.681939 CACCTAAAGTGGTTAAATTAGCAGA 57.318 36.000 0.00 0.00 43.26 4.26
967 1021 7.847096 TCTGTCTAGCATGTTATTTTAGTCCA 58.153 34.615 0.00 0.00 0.00 4.02
968 1022 8.486210 TCTGTCTAGCATGTTATTTTAGTCCAT 58.514 33.333 0.00 0.00 0.00 3.41
1000 1054 4.517832 GCCAATCATGAGCATCTTATGACA 59.482 41.667 0.09 0.00 38.85 3.58
1113 1851 2.049156 CAGAAGTCGTGCCTCGCA 60.049 61.111 0.00 0.00 39.67 5.10
1140 1878 1.443872 CGGCTTCAACTACGACGCT 60.444 57.895 0.00 0.00 31.24 5.07
1338 2099 2.760374 CCTGTTCTGAACTCCAGTGTC 58.240 52.381 20.18 0.00 43.38 3.67
1342 2103 3.382227 TGTTCTGAACTCCAGTGTCGTAA 59.618 43.478 20.18 0.00 43.38 3.18
1547 2315 3.049674 TGGCAAGCGCGAGAAAGG 61.050 61.111 12.10 0.00 39.92 3.11
1548 2316 4.467062 GGCAAGCGCGAGAAAGGC 62.467 66.667 12.10 3.42 39.92 4.35
1626 2398 2.332654 GCCGCATTCTGTTTCCGGT 61.333 57.895 0.00 0.00 40.94 5.28
1627 2399 1.862602 GCCGCATTCTGTTTCCGGTT 61.863 55.000 0.00 0.00 40.94 4.44
1634 2429 0.036765 TCTGTTTCCGGTTGGGATCG 60.037 55.000 0.00 0.00 46.62 3.69
1645 2440 0.250684 TTGGGATCGAGTTGCAGCAA 60.251 50.000 2.83 2.83 0.00 3.91
1661 2459 3.998341 GCAGCAAATTGATGATGGTTTGT 59.002 39.130 15.97 0.00 35.45 2.83
1801 2599 3.454573 TGCTACCCCTACGTGCGG 61.455 66.667 0.00 0.00 0.00 5.69
1903 2707 4.384485 ACGCAGTGATCATCGACG 57.616 55.556 17.69 13.11 42.51 5.12
1904 2708 1.226688 ACGCAGTGATCATCGACGG 60.227 57.895 17.69 0.44 42.51 4.79
1905 2709 1.226688 CGCAGTGATCATCGACGGT 60.227 57.895 0.00 0.00 0.00 4.83
1934 2738 4.856801 CGGGGCCGGGAGTGAATG 62.857 72.222 2.18 0.00 35.56 2.67
1935 2739 4.506255 GGGGCCGGGAGTGAATGG 62.506 72.222 2.18 0.00 0.00 3.16
1936 2740 3.407967 GGGCCGGGAGTGAATGGA 61.408 66.667 2.18 0.00 0.00 3.41
1937 2741 2.757124 GGGCCGGGAGTGAATGGAT 61.757 63.158 2.18 0.00 0.00 3.41
1938 2742 1.526917 GGCCGGGAGTGAATGGATG 60.527 63.158 2.18 0.00 0.00 3.51
1939 2743 1.526917 GCCGGGAGTGAATGGATGG 60.527 63.158 2.18 0.00 0.00 3.51
1940 2744 1.526917 CCGGGAGTGAATGGATGGC 60.527 63.158 0.00 0.00 0.00 4.40
1941 2745 1.528824 CGGGAGTGAATGGATGGCT 59.471 57.895 0.00 0.00 0.00 4.75
1942 2746 0.107017 CGGGAGTGAATGGATGGCTT 60.107 55.000 0.00 0.00 0.00 4.35
1943 2747 1.685148 GGGAGTGAATGGATGGCTTC 58.315 55.000 0.00 0.00 0.00 3.86
1944 2748 1.064463 GGGAGTGAATGGATGGCTTCA 60.064 52.381 2.60 0.00 0.00 3.02
1948 2752 3.772060 GTGAATGGATGGCTTCACTTC 57.228 47.619 8.75 7.82 44.94 3.01
1949 2753 2.424956 GTGAATGGATGGCTTCACTTCC 59.575 50.000 8.75 0.00 44.94 3.46
1950 2754 2.041485 TGAATGGATGGCTTCACTTCCA 59.959 45.455 2.60 3.71 45.30 3.53
1951 2755 2.905415 ATGGATGGCTTCACTTCCAA 57.095 45.000 2.60 0.00 44.66 3.53
1952 2756 2.905415 TGGATGGCTTCACTTCCAAT 57.095 45.000 2.60 0.00 40.48 3.16
1953 2757 3.173953 TGGATGGCTTCACTTCCAATT 57.826 42.857 2.60 0.00 40.48 2.32
1954 2758 3.509442 TGGATGGCTTCACTTCCAATTT 58.491 40.909 2.60 0.00 40.48 1.82
1955 2759 3.511146 TGGATGGCTTCACTTCCAATTTC 59.489 43.478 2.60 0.00 40.48 2.17
1956 2760 3.766051 GGATGGCTTCACTTCCAATTTCT 59.234 43.478 2.60 0.00 35.75 2.52
1957 2761 4.381292 GGATGGCTTCACTTCCAATTTCTG 60.381 45.833 2.60 0.00 35.75 3.02
1958 2762 3.565307 TGGCTTCACTTCCAATTTCTGT 58.435 40.909 0.00 0.00 0.00 3.41
1959 2763 4.724399 TGGCTTCACTTCCAATTTCTGTA 58.276 39.130 0.00 0.00 0.00 2.74
1960 2764 4.761739 TGGCTTCACTTCCAATTTCTGTAG 59.238 41.667 0.00 0.00 0.00 2.74
1961 2765 5.003804 GGCTTCACTTCCAATTTCTGTAGA 58.996 41.667 0.00 0.00 0.00 2.59
1962 2766 5.123027 GGCTTCACTTCCAATTTCTGTAGAG 59.877 44.000 0.00 0.00 0.00 2.43
1963 2767 5.123027 GCTTCACTTCCAATTTCTGTAGAGG 59.877 44.000 0.00 0.00 0.00 3.69
1964 2768 4.579869 TCACTTCCAATTTCTGTAGAGGC 58.420 43.478 0.00 0.00 0.00 4.70
1965 2769 4.041567 TCACTTCCAATTTCTGTAGAGGCA 59.958 41.667 0.00 0.00 0.00 4.75
1966 2770 4.394300 CACTTCCAATTTCTGTAGAGGCAG 59.606 45.833 0.00 0.00 37.81 4.85
1967 2771 4.042187 ACTTCCAATTTCTGTAGAGGCAGT 59.958 41.667 0.00 0.00 37.70 4.40
1968 2772 3.942829 TCCAATTTCTGTAGAGGCAGTG 58.057 45.455 0.00 0.00 37.70 3.66
1969 2773 3.582647 TCCAATTTCTGTAGAGGCAGTGA 59.417 43.478 0.00 0.00 37.70 3.41
1970 2774 4.225942 TCCAATTTCTGTAGAGGCAGTGAT 59.774 41.667 0.00 0.00 37.70 3.06
1971 2775 4.334759 CCAATTTCTGTAGAGGCAGTGATG 59.665 45.833 0.00 0.00 37.70 3.07
1972 2776 5.181009 CAATTTCTGTAGAGGCAGTGATGA 58.819 41.667 0.00 0.00 37.70 2.92
1973 2777 5.627182 ATTTCTGTAGAGGCAGTGATGAT 57.373 39.130 0.00 0.00 37.70 2.45
1974 2778 4.397481 TTCTGTAGAGGCAGTGATGATG 57.603 45.455 0.00 0.00 37.70 3.07
1975 2779 2.697229 TCTGTAGAGGCAGTGATGATGG 59.303 50.000 0.00 0.00 37.70 3.51
1976 2780 2.697229 CTGTAGAGGCAGTGATGATGGA 59.303 50.000 0.00 0.00 0.00 3.41
1977 2781 2.697229 TGTAGAGGCAGTGATGATGGAG 59.303 50.000 0.00 0.00 0.00 3.86
1978 2782 1.876849 AGAGGCAGTGATGATGGAGT 58.123 50.000 0.00 0.00 0.00 3.85
1979 2783 3.037851 AGAGGCAGTGATGATGGAGTA 57.962 47.619 0.00 0.00 0.00 2.59
1980 2784 2.964464 AGAGGCAGTGATGATGGAGTAG 59.036 50.000 0.00 0.00 0.00 2.57
1981 2785 2.036992 GAGGCAGTGATGATGGAGTAGG 59.963 54.545 0.00 0.00 0.00 3.18
1982 2786 1.765314 GGCAGTGATGATGGAGTAGGT 59.235 52.381 0.00 0.00 0.00 3.08
1983 2787 2.171448 GGCAGTGATGATGGAGTAGGTT 59.829 50.000 0.00 0.00 0.00 3.50
1984 2788 3.462021 GCAGTGATGATGGAGTAGGTTC 58.538 50.000 0.00 0.00 0.00 3.62
1985 2789 3.118629 GCAGTGATGATGGAGTAGGTTCA 60.119 47.826 0.00 0.00 0.00 3.18
1986 2790 4.444022 GCAGTGATGATGGAGTAGGTTCAT 60.444 45.833 0.00 0.00 0.00 2.57
1987 2791 5.678583 CAGTGATGATGGAGTAGGTTCATT 58.321 41.667 0.00 0.00 0.00 2.57
1988 2792 5.757320 CAGTGATGATGGAGTAGGTTCATTC 59.243 44.000 0.00 0.00 0.00 2.67
1989 2793 5.664908 AGTGATGATGGAGTAGGTTCATTCT 59.335 40.000 0.00 0.00 0.00 2.40
1990 2794 5.757320 GTGATGATGGAGTAGGTTCATTCTG 59.243 44.000 0.00 0.00 0.00 3.02
1991 2795 4.142609 TGATGGAGTAGGTTCATTCTGC 57.857 45.455 0.00 0.00 0.00 4.26
1992 2796 3.776969 TGATGGAGTAGGTTCATTCTGCT 59.223 43.478 0.00 0.00 0.00 4.24
1993 2797 4.225942 TGATGGAGTAGGTTCATTCTGCTT 59.774 41.667 0.00 0.00 0.00 3.91
1994 2798 4.207891 TGGAGTAGGTTCATTCTGCTTC 57.792 45.455 0.00 0.00 0.00 3.86
1995 2799 3.055094 TGGAGTAGGTTCATTCTGCTTCC 60.055 47.826 0.00 0.00 0.00 3.46
1996 2800 3.190874 GAGTAGGTTCATTCTGCTTCCG 58.809 50.000 0.00 0.00 0.00 4.30
1997 2801 2.567615 AGTAGGTTCATTCTGCTTCCGT 59.432 45.455 0.00 0.00 0.00 4.69
1998 2802 2.568623 AGGTTCATTCTGCTTCCGTT 57.431 45.000 0.00 0.00 0.00 4.44
1999 2803 2.154462 AGGTTCATTCTGCTTCCGTTG 58.846 47.619 0.00 0.00 0.00 4.10
2000 2804 1.200020 GGTTCATTCTGCTTCCGTTGG 59.800 52.381 0.00 0.00 0.00 3.77
2001 2805 2.151202 GTTCATTCTGCTTCCGTTGGA 58.849 47.619 0.00 0.00 0.00 3.53
2002 2806 1.808411 TCATTCTGCTTCCGTTGGAC 58.192 50.000 0.00 0.00 0.00 4.02
2003 2807 0.443869 CATTCTGCTTCCGTTGGACG 59.556 55.000 0.00 0.00 42.11 4.79
2004 2808 0.320374 ATTCTGCTTCCGTTGGACGA 59.680 50.000 1.51 0.00 46.05 4.20
2005 2809 0.320374 TTCTGCTTCCGTTGGACGAT 59.680 50.000 1.51 0.00 46.05 3.73
2006 2810 0.389817 TCTGCTTCCGTTGGACGATG 60.390 55.000 1.51 0.00 46.05 3.84
2007 2811 0.670546 CTGCTTCCGTTGGACGATGT 60.671 55.000 1.51 0.00 46.05 3.06
2008 2812 0.948623 TGCTTCCGTTGGACGATGTG 60.949 55.000 1.51 0.00 46.05 3.21
2009 2813 0.949105 GCTTCCGTTGGACGATGTGT 60.949 55.000 1.51 0.00 46.05 3.72
2010 2814 1.670674 GCTTCCGTTGGACGATGTGTA 60.671 52.381 1.51 0.00 46.05 2.90
2011 2815 1.990563 CTTCCGTTGGACGATGTGTAC 59.009 52.381 1.51 0.00 46.05 2.90
2012 2816 0.960286 TCCGTTGGACGATGTGTACA 59.040 50.000 1.51 0.00 46.05 2.90
2013 2817 1.546923 TCCGTTGGACGATGTGTACAT 59.453 47.619 0.00 0.00 46.05 2.29
2014 2818 1.658596 CCGTTGGACGATGTGTACATG 59.341 52.381 0.00 0.00 46.05 3.21
2015 2819 2.333926 CGTTGGACGATGTGTACATGT 58.666 47.619 2.69 2.69 46.05 3.21
2016 2820 2.092055 CGTTGGACGATGTGTACATGTG 59.908 50.000 9.11 0.00 46.05 3.21
2017 2821 2.378445 TGGACGATGTGTACATGTGG 57.622 50.000 9.11 0.00 36.13 4.17
2018 2822 1.006832 GGACGATGTGTACATGTGGC 58.993 55.000 9.11 1.72 36.57 5.01
2019 2823 1.674519 GGACGATGTGTACATGTGGCA 60.675 52.381 9.11 4.65 36.57 4.92
2020 2824 1.660607 GACGATGTGTACATGTGGCAG 59.339 52.381 9.11 0.00 36.57 4.85
2021 2825 1.275010 ACGATGTGTACATGTGGCAGA 59.725 47.619 9.11 6.58 36.57 4.26
2022 2826 2.289382 ACGATGTGTACATGTGGCAGAA 60.289 45.455 9.11 0.00 36.57 3.02
2023 2827 2.094258 CGATGTGTACATGTGGCAGAAC 59.906 50.000 9.11 4.34 36.57 3.01
2024 2828 2.629336 TGTGTACATGTGGCAGAACA 57.371 45.000 9.11 0.00 0.00 3.18
2025 2829 2.924421 TGTGTACATGTGGCAGAACAA 58.076 42.857 9.11 0.00 32.81 2.83
2026 2830 3.282885 TGTGTACATGTGGCAGAACAAA 58.717 40.909 9.11 0.00 32.81 2.83
2027 2831 3.696548 TGTGTACATGTGGCAGAACAAAA 59.303 39.130 9.11 0.00 32.81 2.44
2028 2832 4.041723 GTGTACATGTGGCAGAACAAAAC 58.958 43.478 9.11 0.00 32.81 2.43
2029 2833 2.490328 ACATGTGGCAGAACAAAACG 57.510 45.000 0.00 0.00 32.81 3.60
2030 2834 2.020720 ACATGTGGCAGAACAAAACGA 58.979 42.857 0.00 0.00 32.81 3.85
2031 2835 2.425312 ACATGTGGCAGAACAAAACGAA 59.575 40.909 0.00 0.00 32.81 3.85
2032 2836 3.119316 ACATGTGGCAGAACAAAACGAAA 60.119 39.130 0.00 0.00 32.81 3.46
2033 2837 3.143807 TGTGGCAGAACAAAACGAAAG 57.856 42.857 0.00 0.00 0.00 2.62
2034 2838 2.750166 TGTGGCAGAACAAAACGAAAGA 59.250 40.909 0.00 0.00 0.00 2.52
2035 2839 3.380004 TGTGGCAGAACAAAACGAAAGAT 59.620 39.130 0.00 0.00 0.00 2.40
2036 2840 3.730715 GTGGCAGAACAAAACGAAAGATG 59.269 43.478 0.00 0.00 0.00 2.90
2037 2841 3.629855 TGGCAGAACAAAACGAAAGATGA 59.370 39.130 0.00 0.00 0.00 2.92
2038 2842 3.975035 GGCAGAACAAAACGAAAGATGAC 59.025 43.478 0.00 0.00 0.00 3.06
2039 2843 4.497340 GGCAGAACAAAACGAAAGATGACA 60.497 41.667 0.00 0.00 0.00 3.58
2040 2844 4.672413 GCAGAACAAAACGAAAGATGACAG 59.328 41.667 0.00 0.00 0.00 3.51
2041 2845 5.207768 CAGAACAAAACGAAAGATGACAGG 58.792 41.667 0.00 0.00 0.00 4.00
2042 2846 4.881850 AGAACAAAACGAAAGATGACAGGT 59.118 37.500 0.00 0.00 0.00 4.00
2043 2847 5.357032 AGAACAAAACGAAAGATGACAGGTT 59.643 36.000 0.00 0.00 0.00 3.50
2044 2848 4.920376 ACAAAACGAAAGATGACAGGTTG 58.080 39.130 0.00 0.00 0.00 3.77
2045 2849 3.626028 AAACGAAAGATGACAGGTTGC 57.374 42.857 0.00 0.00 0.00 4.17
2046 2850 2.550830 ACGAAAGATGACAGGTTGCT 57.449 45.000 0.00 0.00 0.00 3.91
2047 2851 2.417719 ACGAAAGATGACAGGTTGCTC 58.582 47.619 0.00 0.00 0.00 4.26
2048 2852 2.037772 ACGAAAGATGACAGGTTGCTCT 59.962 45.455 0.00 0.00 0.00 4.09
2049 2853 2.670414 CGAAAGATGACAGGTTGCTCTC 59.330 50.000 0.00 0.00 0.00 3.20
2050 2854 2.376808 AAGATGACAGGTTGCTCTCG 57.623 50.000 0.00 0.00 0.00 4.04
2051 2855 1.261480 AGATGACAGGTTGCTCTCGT 58.739 50.000 0.00 0.00 0.00 4.18
2052 2856 1.067283 AGATGACAGGTTGCTCTCGTG 60.067 52.381 0.00 0.00 0.00 4.35
2053 2857 0.036952 ATGACAGGTTGCTCTCGTGG 60.037 55.000 0.00 0.00 0.00 4.94
2054 2858 1.367840 GACAGGTTGCTCTCGTGGT 59.632 57.895 0.00 0.00 0.00 4.16
2055 2859 0.249911 GACAGGTTGCTCTCGTGGTT 60.250 55.000 0.00 0.00 0.00 3.67
2056 2860 0.249911 ACAGGTTGCTCTCGTGGTTC 60.250 55.000 0.00 0.00 0.00 3.62
2057 2861 0.951040 CAGGTTGCTCTCGTGGTTCC 60.951 60.000 0.00 0.00 0.00 3.62
2058 2862 1.070786 GGTTGCTCTCGTGGTTCCA 59.929 57.895 0.00 0.00 0.00 3.53
2059 2863 0.321653 GGTTGCTCTCGTGGTTCCAT 60.322 55.000 0.00 0.00 0.00 3.41
2060 2864 1.523758 GTTGCTCTCGTGGTTCCATT 58.476 50.000 0.00 0.00 0.00 3.16
2061 2865 1.464997 GTTGCTCTCGTGGTTCCATTC 59.535 52.381 0.00 0.00 0.00 2.67
2062 2866 0.036388 TGCTCTCGTGGTTCCATTCC 60.036 55.000 0.00 0.00 0.00 3.01
2063 2867 0.250513 GCTCTCGTGGTTCCATTCCT 59.749 55.000 0.00 0.00 0.00 3.36
2064 2868 1.339151 GCTCTCGTGGTTCCATTCCTT 60.339 52.381 0.00 0.00 0.00 3.36
2065 2869 2.876079 GCTCTCGTGGTTCCATTCCTTT 60.876 50.000 0.00 0.00 0.00 3.11
2066 2870 3.412386 CTCTCGTGGTTCCATTCCTTTT 58.588 45.455 0.00 0.00 0.00 2.27
2067 2871 3.821033 CTCTCGTGGTTCCATTCCTTTTT 59.179 43.478 0.00 0.00 0.00 1.94
2068 2872 3.818773 TCTCGTGGTTCCATTCCTTTTTC 59.181 43.478 0.00 0.00 0.00 2.29
2069 2873 3.821033 CTCGTGGTTCCATTCCTTTTTCT 59.179 43.478 0.00 0.00 0.00 2.52
2070 2874 3.568007 TCGTGGTTCCATTCCTTTTTCTG 59.432 43.478 0.00 0.00 0.00 3.02
2071 2875 3.653344 GTGGTTCCATTCCTTTTTCTGC 58.347 45.455 0.00 0.00 0.00 4.26
2072 2876 3.321968 GTGGTTCCATTCCTTTTTCTGCT 59.678 43.478 0.00 0.00 0.00 4.24
2073 2877 3.573967 TGGTTCCATTCCTTTTTCTGCTC 59.426 43.478 0.00 0.00 0.00 4.26
2074 2878 3.829026 GGTTCCATTCCTTTTTCTGCTCT 59.171 43.478 0.00 0.00 0.00 4.09
2075 2879 4.281941 GGTTCCATTCCTTTTTCTGCTCTT 59.718 41.667 0.00 0.00 0.00 2.85
2076 2880 5.225642 GTTCCATTCCTTTTTCTGCTCTTG 58.774 41.667 0.00 0.00 0.00 3.02
2077 2881 4.728772 TCCATTCCTTTTTCTGCTCTTGA 58.271 39.130 0.00 0.00 0.00 3.02
2078 2882 5.139727 TCCATTCCTTTTTCTGCTCTTGAA 58.860 37.500 0.00 0.00 0.00 2.69
2079 2883 5.598005 TCCATTCCTTTTTCTGCTCTTGAAA 59.402 36.000 0.00 0.00 0.00 2.69
2080 2884 6.268387 TCCATTCCTTTTTCTGCTCTTGAAAT 59.732 34.615 0.00 0.00 34.04 2.17
2081 2885 6.589139 CCATTCCTTTTTCTGCTCTTGAAATC 59.411 38.462 0.00 0.00 34.04 2.17
2082 2886 6.713762 TTCCTTTTTCTGCTCTTGAAATCA 57.286 33.333 0.00 0.00 34.04 2.57
2083 2887 6.713762 TCCTTTTTCTGCTCTTGAAATCAA 57.286 33.333 0.00 0.00 34.04 2.57
2084 2888 7.294017 TCCTTTTTCTGCTCTTGAAATCAAT 57.706 32.000 0.00 0.00 35.02 2.57
2085 2889 7.729116 TCCTTTTTCTGCTCTTGAAATCAATT 58.271 30.769 0.00 0.00 35.02 2.32
2086 2890 8.206189 TCCTTTTTCTGCTCTTGAAATCAATTT 58.794 29.630 0.00 0.00 35.02 1.82
2087 2891 8.833493 CCTTTTTCTGCTCTTGAAATCAATTTT 58.167 29.630 0.00 0.00 35.02 1.82
2110 2914 4.345859 TTTTTCTTTCGGGTCTGCTAGA 57.654 40.909 0.00 0.00 0.00 2.43
2111 2915 4.553330 TTTTCTTTCGGGTCTGCTAGAT 57.447 40.909 0.00 0.00 0.00 1.98
2112 2916 5.670792 TTTTCTTTCGGGTCTGCTAGATA 57.329 39.130 0.00 0.00 0.00 1.98
2113 2917 5.871396 TTTCTTTCGGGTCTGCTAGATAT 57.129 39.130 0.00 0.00 0.00 1.63
2114 2918 4.855715 TCTTTCGGGTCTGCTAGATATG 57.144 45.455 0.00 0.00 0.00 1.78
2115 2919 4.470602 TCTTTCGGGTCTGCTAGATATGA 58.529 43.478 0.00 0.00 0.00 2.15
2116 2920 4.520874 TCTTTCGGGTCTGCTAGATATGAG 59.479 45.833 0.00 0.00 0.00 2.90
2117 2921 2.796557 TCGGGTCTGCTAGATATGAGG 58.203 52.381 0.00 0.00 0.00 3.86
2118 2922 2.108425 TCGGGTCTGCTAGATATGAGGT 59.892 50.000 0.00 0.00 0.00 3.85
2119 2923 2.230025 CGGGTCTGCTAGATATGAGGTG 59.770 54.545 0.00 0.00 0.00 4.00
2120 2924 2.028567 GGGTCTGCTAGATATGAGGTGC 60.029 54.545 0.00 0.00 0.00 5.01
2121 2925 2.028567 GGTCTGCTAGATATGAGGTGCC 60.029 54.545 0.00 0.00 0.00 5.01
2122 2926 2.896685 GTCTGCTAGATATGAGGTGCCT 59.103 50.000 0.00 0.00 0.00 4.75
2123 2927 4.082845 GTCTGCTAGATATGAGGTGCCTA 58.917 47.826 0.00 0.00 0.00 3.93
2124 2928 4.524714 GTCTGCTAGATATGAGGTGCCTAA 59.475 45.833 0.00 0.00 0.00 2.69
2125 2929 5.011125 GTCTGCTAGATATGAGGTGCCTAAA 59.989 44.000 0.00 0.00 0.00 1.85
2126 2930 5.782331 TCTGCTAGATATGAGGTGCCTAAAT 59.218 40.000 0.00 0.00 0.00 1.40
2127 2931 6.270927 TCTGCTAGATATGAGGTGCCTAAATT 59.729 38.462 0.00 0.00 0.00 1.82
2128 2932 6.841601 TGCTAGATATGAGGTGCCTAAATTT 58.158 36.000 0.00 0.00 0.00 1.82
2129 2933 7.290061 TGCTAGATATGAGGTGCCTAAATTTT 58.710 34.615 0.00 0.00 0.00 1.82
2130 2934 7.779798 TGCTAGATATGAGGTGCCTAAATTTTT 59.220 33.333 0.00 0.00 0.00 1.94
2144 2948 4.134623 TTTTTGCTCGCGGTCAGT 57.865 50.000 6.13 0.00 0.00 3.41
2145 2949 1.938861 TTTTTGCTCGCGGTCAGTC 59.061 52.632 6.13 0.00 0.00 3.51
2146 2950 1.827315 TTTTTGCTCGCGGTCAGTCG 61.827 55.000 6.13 0.00 0.00 4.18
2147 2951 2.686956 TTTTGCTCGCGGTCAGTCGA 62.687 55.000 6.13 0.00 0.00 4.20
2148 2952 2.486636 TTTGCTCGCGGTCAGTCGAT 62.487 55.000 6.13 0.00 33.98 3.59
2149 2953 2.202623 GCTCGCGGTCAGTCGATT 60.203 61.111 6.13 0.00 33.98 3.34
2150 2954 2.224885 GCTCGCGGTCAGTCGATTC 61.225 63.158 6.13 0.00 33.98 2.52
2151 2955 1.429825 CTCGCGGTCAGTCGATTCT 59.570 57.895 6.13 0.00 33.98 2.40
2152 2956 0.863538 CTCGCGGTCAGTCGATTCTG 60.864 60.000 6.13 0.00 33.98 3.02
2153 2957 1.136774 CGCGGTCAGTCGATTCTGA 59.863 57.895 0.00 1.80 41.40 3.27
2154 2958 0.456142 CGCGGTCAGTCGATTCTGAA 60.456 55.000 7.26 0.00 44.48 3.02
2155 2959 0.992802 GCGGTCAGTCGATTCTGAAC 59.007 55.000 10.31 10.31 45.47 3.18
2157 2961 2.631418 GGTCAGTCGATTCTGAACGA 57.369 50.000 7.26 9.78 44.48 3.85
2158 2962 2.520979 GGTCAGTCGATTCTGAACGAG 58.479 52.381 7.26 5.73 44.48 4.18
2159 2963 2.520979 GTCAGTCGATTCTGAACGAGG 58.479 52.381 7.26 9.73 44.48 4.63
2160 2964 1.135373 TCAGTCGATTCTGAACGAGGC 60.135 52.381 12.86 1.46 40.82 4.70
2161 2965 0.173708 AGTCGATTCTGAACGAGGCC 59.826 55.000 12.86 0.00 39.16 5.19
2162 2966 1.138883 TCGATTCTGAACGAGGCCG 59.861 57.895 0.00 0.00 42.50 6.13
2163 2967 1.138883 CGATTCTGAACGAGGCCGA 59.861 57.895 0.00 0.00 39.50 5.54
2164 2968 0.457853 CGATTCTGAACGAGGCCGAA 60.458 55.000 0.00 0.00 39.50 4.30
2165 2969 1.281899 GATTCTGAACGAGGCCGAAG 58.718 55.000 0.00 0.00 39.50 3.79
2178 2982 2.640989 CGAAGGGTGACGTGTCGA 59.359 61.111 0.00 0.00 33.64 4.20
2179 2983 1.442184 CGAAGGGTGACGTGTCGAG 60.442 63.158 0.00 0.00 33.64 4.04
2180 2984 1.733399 GAAGGGTGACGTGTCGAGC 60.733 63.158 0.00 0.00 0.00 5.03
2181 2985 3.553437 AAGGGTGACGTGTCGAGCG 62.553 63.158 0.00 7.64 0.00 5.03
2191 2995 4.838486 GTCGAGCGCGGTGAGGAG 62.838 72.222 18.92 1.42 38.28 3.69
2193 2997 4.544689 CGAGCGCGGTGAGGAGAG 62.545 72.222 18.92 0.00 0.00 3.20
2194 2998 4.863925 GAGCGCGGTGAGGAGAGC 62.864 72.222 18.92 0.00 0.00 4.09
2197 3001 3.753434 CGCGGTGAGGAGAGCTGT 61.753 66.667 0.00 0.00 0.00 4.40
2198 3002 2.125753 GCGGTGAGGAGAGCTGTG 60.126 66.667 0.00 0.00 0.00 3.66
2199 3003 2.640302 GCGGTGAGGAGAGCTGTGA 61.640 63.158 0.00 0.00 0.00 3.58
2200 3004 1.954362 GCGGTGAGGAGAGCTGTGAT 61.954 60.000 0.00 0.00 0.00 3.06
2201 3005 0.179116 CGGTGAGGAGAGCTGTGATG 60.179 60.000 0.00 0.00 0.00 3.07
2202 3006 0.901124 GGTGAGGAGAGCTGTGATGT 59.099 55.000 0.00 0.00 0.00 3.06
2203 3007 1.277557 GGTGAGGAGAGCTGTGATGTT 59.722 52.381 0.00 0.00 0.00 2.71
2204 3008 2.615869 GTGAGGAGAGCTGTGATGTTC 58.384 52.381 0.00 0.00 0.00 3.18
2205 3009 1.552337 TGAGGAGAGCTGTGATGTTCC 59.448 52.381 0.00 0.00 0.00 3.62
2206 3010 1.552337 GAGGAGAGCTGTGATGTTCCA 59.448 52.381 0.00 0.00 0.00 3.53
2207 3011 1.980765 AGGAGAGCTGTGATGTTCCAA 59.019 47.619 0.00 0.00 0.00 3.53
2208 3012 2.373169 AGGAGAGCTGTGATGTTCCAAA 59.627 45.455 0.00 0.00 0.00 3.28
2209 3013 2.485814 GGAGAGCTGTGATGTTCCAAAC 59.514 50.000 0.00 0.00 0.00 2.93
2210 3014 3.141398 GAGAGCTGTGATGTTCCAAACA 58.859 45.455 0.00 0.00 46.94 2.83
2211 3015 3.144506 AGAGCTGTGATGTTCCAAACAG 58.855 45.455 0.00 0.00 45.95 3.16
2212 3016 3.141398 GAGCTGTGATGTTCCAAACAGA 58.859 45.455 5.87 0.00 45.95 3.41
2213 3017 3.144506 AGCTGTGATGTTCCAAACAGAG 58.855 45.455 5.87 0.00 45.95 3.35
2214 3018 2.227388 GCTGTGATGTTCCAAACAGAGG 59.773 50.000 5.87 0.00 45.95 3.69
2215 3019 2.227388 CTGTGATGTTCCAAACAGAGGC 59.773 50.000 0.00 0.00 45.95 4.70
2216 3020 1.197721 GTGATGTTCCAAACAGAGGCG 59.802 52.381 0.00 0.00 45.95 5.52
2217 3021 1.071542 TGATGTTCCAAACAGAGGCGA 59.928 47.619 0.00 0.00 45.95 5.54
2218 3022 1.734465 GATGTTCCAAACAGAGGCGAG 59.266 52.381 0.00 0.00 45.95 5.03
2219 3023 0.250295 TGTTCCAAACAGAGGCGAGG 60.250 55.000 0.00 0.00 36.25 4.63
2220 3024 0.034896 GTTCCAAACAGAGGCGAGGA 59.965 55.000 0.00 0.00 0.00 3.71
2221 3025 0.762418 TTCCAAACAGAGGCGAGGAA 59.238 50.000 0.00 0.00 33.10 3.36
2222 3026 0.321671 TCCAAACAGAGGCGAGGAAG 59.678 55.000 0.00 0.00 0.00 3.46
2223 3027 1.301677 CCAAACAGAGGCGAGGAAGC 61.302 60.000 0.00 0.00 0.00 3.86
2224 3028 1.374758 AAACAGAGGCGAGGAAGCG 60.375 57.895 0.00 0.00 38.18 4.68
2225 3029 2.788191 AAACAGAGGCGAGGAAGCGG 62.788 60.000 0.00 0.00 38.18 5.52
2226 3030 4.521062 CAGAGGCGAGGAAGCGGG 62.521 72.222 0.00 0.00 38.18 6.13
2228 3032 4.083862 GAGGCGAGGAAGCGGGTT 62.084 66.667 0.00 0.00 38.18 4.11
2229 3033 4.394712 AGGCGAGGAAGCGGGTTG 62.395 66.667 0.00 0.00 38.18 3.77
2230 3034 4.388499 GGCGAGGAAGCGGGTTGA 62.388 66.667 0.00 0.00 38.18 3.18
2231 3035 2.125106 GCGAGGAAGCGGGTTGAT 60.125 61.111 0.00 0.00 0.00 2.57
2232 3036 2.464459 GCGAGGAAGCGGGTTGATG 61.464 63.158 0.00 0.00 0.00 3.07
2233 3037 1.218047 CGAGGAAGCGGGTTGATGA 59.782 57.895 0.00 0.00 0.00 2.92
2234 3038 1.084370 CGAGGAAGCGGGTTGATGAC 61.084 60.000 0.00 0.00 0.00 3.06
2235 3039 0.250513 GAGGAAGCGGGTTGATGACT 59.749 55.000 0.00 0.00 0.00 3.41
2236 3040 0.036010 AGGAAGCGGGTTGATGACTG 60.036 55.000 0.00 0.00 0.00 3.51
2237 3041 1.026718 GGAAGCGGGTTGATGACTGG 61.027 60.000 0.00 0.00 0.00 4.00
2238 3042 0.321653 GAAGCGGGTTGATGACTGGT 60.322 55.000 0.00 0.00 0.00 4.00
2239 3043 0.606401 AAGCGGGTTGATGACTGGTG 60.606 55.000 0.00 0.00 0.00 4.17
2240 3044 2.690778 GCGGGTTGATGACTGGTGC 61.691 63.158 0.00 0.00 0.00 5.01
2241 3045 1.302431 CGGGTTGATGACTGGTGCA 60.302 57.895 0.00 0.00 0.00 4.57
2242 3046 1.300971 CGGGTTGATGACTGGTGCAG 61.301 60.000 0.00 0.00 37.52 4.41
2243 3047 0.036732 GGGTTGATGACTGGTGCAGA 59.963 55.000 0.00 0.00 35.18 4.26
2244 3048 1.340405 GGGTTGATGACTGGTGCAGAT 60.340 52.381 0.00 0.00 35.18 2.90
2245 3049 2.012673 GGTTGATGACTGGTGCAGATC 58.987 52.381 0.00 0.00 35.18 2.75
2246 3050 1.662629 GTTGATGACTGGTGCAGATCG 59.337 52.381 0.00 0.00 35.18 3.69
2247 3051 0.176449 TGATGACTGGTGCAGATCGG 59.824 55.000 0.00 0.00 35.18 4.18
2248 3052 0.461548 GATGACTGGTGCAGATCGGA 59.538 55.000 0.00 0.00 35.18 4.55
2249 3053 0.463204 ATGACTGGTGCAGATCGGAG 59.537 55.000 0.00 0.00 35.18 4.63
2250 3054 1.142748 GACTGGTGCAGATCGGAGG 59.857 63.158 0.00 0.00 35.18 4.30
2251 3055 2.303549 GACTGGTGCAGATCGGAGGG 62.304 65.000 0.00 0.00 35.18 4.30
2252 3056 3.083349 TGGTGCAGATCGGAGGGG 61.083 66.667 0.00 0.00 0.00 4.79
2253 3057 3.866582 GGTGCAGATCGGAGGGGG 61.867 72.222 0.00 0.00 0.00 5.40
2276 3080 4.790861 GGGTCGTCGCCGGAGAAC 62.791 72.222 10.32 5.35 33.95 3.01
2277 3081 3.745803 GGTCGTCGCCGGAGAACT 61.746 66.667 10.32 0.00 33.95 3.01
2278 3082 2.257676 GTCGTCGCCGGAGAACTT 59.742 61.111 10.32 0.00 33.95 2.66
2279 3083 1.503542 GTCGTCGCCGGAGAACTTA 59.496 57.895 10.32 0.00 33.95 2.24
2280 3084 0.109597 GTCGTCGCCGGAGAACTTAA 60.110 55.000 10.32 0.00 33.95 1.85
2281 3085 0.169672 TCGTCGCCGGAGAACTTAAG 59.830 55.000 10.32 0.00 33.95 1.85
2282 3086 0.169672 CGTCGCCGGAGAACTTAAGA 59.830 55.000 10.32 0.00 0.00 2.10
2283 3087 1.202268 CGTCGCCGGAGAACTTAAGAT 60.202 52.381 10.32 0.00 0.00 2.40
2284 3088 2.461903 GTCGCCGGAGAACTTAAGATC 58.538 52.381 10.32 7.10 0.00 2.75
2285 3089 1.065102 TCGCCGGAGAACTTAAGATCG 59.935 52.381 5.05 5.29 0.00 3.69
2286 3090 1.854227 GCCGGAGAACTTAAGATCGG 58.146 55.000 5.05 14.11 39.07 4.18
2287 3091 1.407979 GCCGGAGAACTTAAGATCGGA 59.592 52.381 5.05 0.00 38.42 4.55
2288 3092 2.544069 GCCGGAGAACTTAAGATCGGAG 60.544 54.545 5.05 11.47 38.42 4.63
2289 3093 2.034812 CCGGAGAACTTAAGATCGGAGG 59.965 54.545 10.09 8.90 38.42 4.30
2290 3094 2.034812 CGGAGAACTTAAGATCGGAGGG 59.965 54.545 10.09 0.00 0.00 4.30
2291 3095 3.032459 GGAGAACTTAAGATCGGAGGGT 58.968 50.000 10.09 0.00 0.00 4.34
2292 3096 3.451540 GGAGAACTTAAGATCGGAGGGTT 59.548 47.826 10.09 0.00 0.00 4.11
2293 3097 4.441773 GGAGAACTTAAGATCGGAGGGTTC 60.442 50.000 10.09 0.00 33.91 3.62
2294 3098 4.094476 AGAACTTAAGATCGGAGGGTTCA 58.906 43.478 10.09 0.00 35.49 3.18
2295 3099 4.160626 AGAACTTAAGATCGGAGGGTTCAG 59.839 45.833 10.09 0.00 35.49 3.02
2296 3100 3.709587 ACTTAAGATCGGAGGGTTCAGA 58.290 45.455 10.09 0.00 32.06 3.27
2297 3101 3.702045 ACTTAAGATCGGAGGGTTCAGAG 59.298 47.826 10.09 0.00 31.02 3.35
2298 3102 1.490574 AAGATCGGAGGGTTCAGAGG 58.509 55.000 0.00 0.00 31.02 3.69
2299 3103 0.631753 AGATCGGAGGGTTCAGAGGA 59.368 55.000 0.00 0.00 31.02 3.71
2300 3104 1.007238 AGATCGGAGGGTTCAGAGGAA 59.993 52.381 0.00 0.00 31.02 3.36
2301 3105 2.043227 GATCGGAGGGTTCAGAGGAAT 58.957 52.381 0.00 0.00 35.05 3.01
2302 3106 1.195115 TCGGAGGGTTCAGAGGAATG 58.805 55.000 0.00 0.00 35.05 2.67
2303 3107 0.179000 CGGAGGGTTCAGAGGAATGG 59.821 60.000 0.00 0.00 35.05 3.16
2304 3108 0.106967 GGAGGGTTCAGAGGAATGGC 60.107 60.000 0.00 0.00 35.05 4.40
2305 3109 0.106967 GAGGGTTCAGAGGAATGGCC 60.107 60.000 0.00 0.00 35.05 5.36
2365 3169 3.191539 GGCAGCGCGAGGAAGAAG 61.192 66.667 12.10 0.00 0.00 2.85
2366 3170 2.125912 GCAGCGCGAGGAAGAAGA 60.126 61.111 12.10 0.00 0.00 2.87
2367 3171 1.738099 GCAGCGCGAGGAAGAAGAA 60.738 57.895 12.10 0.00 0.00 2.52
2368 3172 1.691215 GCAGCGCGAGGAAGAAGAAG 61.691 60.000 12.10 0.00 0.00 2.85
2369 3173 0.109086 CAGCGCGAGGAAGAAGAAGA 60.109 55.000 12.10 0.00 0.00 2.87
2370 3174 0.820871 AGCGCGAGGAAGAAGAAGAT 59.179 50.000 12.10 0.00 0.00 2.40
2371 3175 1.202359 AGCGCGAGGAAGAAGAAGATC 60.202 52.381 12.10 0.00 0.00 2.75
2372 3176 1.469940 GCGCGAGGAAGAAGAAGATCA 60.470 52.381 12.10 0.00 0.00 2.92
2373 3177 2.801342 GCGCGAGGAAGAAGAAGATCAT 60.801 50.000 12.10 0.00 0.00 2.45
2374 3178 3.452474 CGCGAGGAAGAAGAAGATCATT 58.548 45.455 0.00 0.00 0.00 2.57
2375 3179 3.868077 CGCGAGGAAGAAGAAGATCATTT 59.132 43.478 0.00 0.00 0.00 2.32
2376 3180 4.331168 CGCGAGGAAGAAGAAGATCATTTT 59.669 41.667 0.00 0.00 0.00 1.82
2377 3181 5.163814 CGCGAGGAAGAAGAAGATCATTTTT 60.164 40.000 0.00 0.00 0.00 1.94
2458 3271 5.477984 ACTGTACTTAGAAATACGGTCACCA 59.522 40.000 0.00 0.00 36.38 4.17
2459 3272 6.154021 ACTGTACTTAGAAATACGGTCACCAT 59.846 38.462 0.00 0.00 36.38 3.55
2527 3340 2.746277 GCCGCTCGGTTTGACCAT 60.746 61.111 10.24 0.00 38.47 3.55
2543 3356 2.489329 GACCATGTGTTGACCAATCCTG 59.511 50.000 0.00 0.00 0.00 3.86
2597 3410 1.970640 GTGTTTTTGCAGAATCCCCCT 59.029 47.619 0.00 0.00 0.00 4.79
2672 3498 2.520741 GGGAGGAGGAGGAGAGCG 60.521 72.222 0.00 0.00 0.00 5.03
2673 3499 2.520741 GGAGGAGGAGGAGAGCGG 60.521 72.222 0.00 0.00 0.00 5.52
2674 3500 2.520741 GAGGAGGAGGAGAGCGGG 60.521 72.222 0.00 0.00 0.00 6.13
2675 3501 4.150454 AGGAGGAGGAGAGCGGGG 62.150 72.222 0.00 0.00 0.00 5.73
2734 3560 0.308068 GTCATCGAGATCGCGGAAGA 59.692 55.000 18.89 11.14 39.60 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 8.255111 TCATAGTCTGATCATGTGAAACCTAT 57.745 34.615 0.00 0.00 34.36 2.57
35 36 7.287927 TGCTACTTCAAGGCTACTATTCATAGT 59.712 37.037 4.87 4.87 45.08 2.12
37 38 7.597288 TGCTACTTCAAGGCTACTATTCATA 57.403 36.000 0.00 0.00 0.00 2.15
42 43 4.441634 CGGTTGCTACTTCAAGGCTACTAT 60.442 45.833 0.00 0.00 33.64 2.12
63 68 8.504005 ACTAATAAATTCAGAAACAGAACACGG 58.496 33.333 0.00 0.00 0.00 4.94
228 235 8.650490 TGTTATGCTACATGATGAAGGAGAATA 58.350 33.333 0.00 0.00 0.00 1.75
264 291 2.496070 CCCAGTTAGCTGCTACAGTACA 59.504 50.000 9.27 0.00 41.26 2.90
265 292 2.496470 ACCCAGTTAGCTGCTACAGTAC 59.504 50.000 9.27 5.00 41.26 2.73
266 293 2.496070 CACCCAGTTAGCTGCTACAGTA 59.504 50.000 9.27 0.00 41.26 2.74
267 294 1.276421 CACCCAGTTAGCTGCTACAGT 59.724 52.381 9.27 1.53 41.26 3.55
268 295 2.009042 GCACCCAGTTAGCTGCTACAG 61.009 57.143 9.27 2.23 41.26 2.74
299 331 3.480470 TCTCTGAACAAAAGCTTGAGGG 58.520 45.455 0.00 0.00 36.33 4.30
412 453 3.012518 AGCAGGAGGAAATTGAATGTCG 58.987 45.455 0.00 0.00 0.00 4.35
415 456 3.012518 ACGAGCAGGAGGAAATTGAATG 58.987 45.455 0.00 0.00 0.00 2.67
502 549 0.250467 TCCTGAGCCAACACTCAAGC 60.250 55.000 0.00 0.00 45.72 4.01
526 573 5.413499 CAGCACAATATGGGGAAGAAAAAG 58.587 41.667 0.00 0.00 0.00 2.27
572 621 9.988815 GTGTCCATTCAGAATATCACTAATAGT 57.011 33.333 13.05 0.00 0.00 2.12
587 636 4.696877 TGATAGCAAGTTGTGTCCATTCAG 59.303 41.667 4.48 0.00 0.00 3.02
604 653 5.625251 CGCATCCAAAATATCACTGATAGC 58.375 41.667 5.04 0.13 0.00 2.97
609 658 3.181498 TGTGCGCATCCAAAATATCACTG 60.181 43.478 15.91 0.00 0.00 3.66
682 731 5.700832 TCAACCTCTATTAACACAAGCACAG 59.299 40.000 0.00 0.00 0.00 3.66
690 739 9.817809 TCATCAACTATCAACCTCTATTAACAC 57.182 33.333 0.00 0.00 0.00 3.32
695 744 9.965902 AAAGTTCATCAACTATCAACCTCTATT 57.034 29.630 0.00 0.00 42.45 1.73
696 745 9.388506 CAAAGTTCATCAACTATCAACCTCTAT 57.611 33.333 0.00 0.00 42.45 1.98
697 746 7.334421 GCAAAGTTCATCAACTATCAACCTCTA 59.666 37.037 0.00 0.00 42.45 2.43
698 747 6.150140 GCAAAGTTCATCAACTATCAACCTCT 59.850 38.462 0.00 0.00 42.45 3.69
699 748 6.150140 AGCAAAGTTCATCAACTATCAACCTC 59.850 38.462 0.00 0.00 42.45 3.85
700 749 6.006449 AGCAAAGTTCATCAACTATCAACCT 58.994 36.000 0.00 0.00 42.45 3.50
701 750 6.259550 AGCAAAGTTCATCAACTATCAACC 57.740 37.500 0.00 0.00 42.45 3.77
709 758 9.294030 CCAAGAATTATAGCAAAGTTCATCAAC 57.706 33.333 0.00 0.00 0.00 3.18
710 759 8.469200 CCCAAGAATTATAGCAAAGTTCATCAA 58.531 33.333 0.00 0.00 0.00 2.57
711 760 7.416664 GCCCAAGAATTATAGCAAAGTTCATCA 60.417 37.037 0.00 0.00 0.00 3.07
712 761 6.920210 GCCCAAGAATTATAGCAAAGTTCATC 59.080 38.462 0.00 0.00 0.00 2.92
713 762 6.608808 AGCCCAAGAATTATAGCAAAGTTCAT 59.391 34.615 0.00 0.00 0.00 2.57
714 763 5.951747 AGCCCAAGAATTATAGCAAAGTTCA 59.048 36.000 0.00 0.00 0.00 3.18
715 764 6.127619 ACAGCCCAAGAATTATAGCAAAGTTC 60.128 38.462 0.00 0.00 0.00 3.01
716 765 5.716703 ACAGCCCAAGAATTATAGCAAAGTT 59.283 36.000 0.00 0.00 0.00 2.66
717 766 5.126061 CACAGCCCAAGAATTATAGCAAAGT 59.874 40.000 0.00 0.00 0.00 2.66
718 767 5.585390 CACAGCCCAAGAATTATAGCAAAG 58.415 41.667 0.00 0.00 0.00 2.77
719 768 4.142182 GCACAGCCCAAGAATTATAGCAAA 60.142 41.667 0.00 0.00 0.00 3.68
720 769 3.381272 GCACAGCCCAAGAATTATAGCAA 59.619 43.478 0.00 0.00 0.00 3.91
721 770 2.951642 GCACAGCCCAAGAATTATAGCA 59.048 45.455 0.00 0.00 0.00 3.49
722 771 3.217626 AGCACAGCCCAAGAATTATAGC 58.782 45.455 0.00 0.00 0.00 2.97
723 772 5.841957 AAAGCACAGCCCAAGAATTATAG 57.158 39.130 0.00 0.00 0.00 1.31
724 773 8.621532 CTATAAAGCACAGCCCAAGAATTATA 57.378 34.615 0.00 0.00 0.00 0.98
725 774 7.516198 CTATAAAGCACAGCCCAAGAATTAT 57.484 36.000 0.00 0.00 0.00 1.28
726 775 6.942532 CTATAAAGCACAGCCCAAGAATTA 57.057 37.500 0.00 0.00 0.00 1.40
727 776 5.841957 CTATAAAGCACAGCCCAAGAATT 57.158 39.130 0.00 0.00 0.00 2.17
815 868 3.304592 GCAATGGGGAAAAACATTTGCAC 60.305 43.478 0.00 0.00 35.26 4.57
819 873 3.148412 GCTGCAATGGGGAAAAACATTT 58.852 40.909 0.00 0.00 35.26 2.32
880 934 6.543831 GTGCCAGTTAACAGATGAATAATCCT 59.456 38.462 8.61 0.00 35.72 3.24
888 942 4.901197 TTAGGTGCCAGTTAACAGATGA 57.099 40.909 8.61 0.00 0.00 2.92
960 1014 6.480763 TGATTGGCTTCTTGTAATGGACTAA 58.519 36.000 0.00 0.00 0.00 2.24
967 1021 4.951715 TGCTCATGATTGGCTTCTTGTAAT 59.048 37.500 0.00 0.00 0.00 1.89
968 1022 4.334552 TGCTCATGATTGGCTTCTTGTAA 58.665 39.130 0.00 0.00 0.00 2.41
1000 1054 3.124921 GTGCGTGCTTACGGGCAT 61.125 61.111 1.86 0.00 44.34 4.40
1012 1066 3.860605 TGGTGTGAGGCTGTGCGT 61.861 61.111 0.00 0.00 0.00 5.24
1014 1068 1.963338 GAGTGGTGTGAGGCTGTGC 60.963 63.158 0.00 0.00 0.00 4.57
1140 1878 4.451150 GTGGCGCCGTGGAGATCA 62.451 66.667 23.90 0.00 0.00 2.92
1293 2031 2.624557 GGCTTACTTCCAGGAGAGGAGA 60.625 54.545 0.00 0.00 39.25 3.71
1442 2210 1.901833 TGTAGCAGATGCAGAACCTCA 59.098 47.619 7.68 0.00 45.16 3.86
1506 2274 0.041047 CGTAGTTGTCGTCGGTGACA 60.041 55.000 6.56 6.56 46.63 3.58
1521 2289 2.813179 GCGCTTGCCACCATCGTAG 61.813 63.158 0.00 0.00 0.00 3.51
1606 2374 1.135315 CGGAAACAGAATGCGGCAG 59.865 57.895 9.25 0.00 42.53 4.85
1607 2375 2.331893 CCGGAAACAGAATGCGGCA 61.332 57.895 4.58 4.58 44.72 5.69
1608 2376 2.485122 CCGGAAACAGAATGCGGC 59.515 61.111 0.00 0.00 44.72 6.53
1610 2378 0.109781 CCAACCGGAAACAGAATGCG 60.110 55.000 9.46 0.00 42.53 4.73
1626 2398 0.250684 TTGCTGCAACTCGATCCCAA 60.251 50.000 11.69 0.00 0.00 4.12
1627 2399 0.250684 TTTGCTGCAACTCGATCCCA 60.251 50.000 15.72 0.00 0.00 4.37
1634 2429 3.863424 CCATCATCAATTTGCTGCAACTC 59.137 43.478 15.72 0.00 0.00 3.01
1645 2440 5.787953 TGTCACACAAACCATCATCAATT 57.212 34.783 0.00 0.00 0.00 2.32
1661 2459 0.250684 ATCCACGCAACCATGTCACA 60.251 50.000 0.00 0.00 0.00 3.58
1801 2599 4.400961 AAGTGCCTCTGCCGGAGC 62.401 66.667 5.05 0.00 40.57 4.70
1882 2686 2.580470 CGATGATCACTGCGTCCGC 61.580 63.158 4.42 4.42 42.35 5.54
1883 2687 1.064134 TCGATGATCACTGCGTCCG 59.936 57.895 0.00 0.00 0.00 4.79
1884 2688 1.202973 CGTCGATGATCACTGCGTCC 61.203 60.000 0.00 0.00 0.00 4.79
1901 2705 3.812019 CGCAGCTAGGACGACCGT 61.812 66.667 0.00 0.00 41.83 4.83
1902 2706 4.554363 CCGCAGCTAGGACGACCG 62.554 72.222 1.34 0.00 41.83 4.79
1903 2707 4.208686 CCCGCAGCTAGGACGACC 62.209 72.222 8.84 0.00 0.00 4.79
1904 2708 4.208686 CCCCGCAGCTAGGACGAC 62.209 72.222 8.84 0.00 0.00 4.34
1929 2733 2.041485 TGGAAGTGAAGCCATCCATTCA 59.959 45.455 0.00 0.00 37.05 2.57
1930 2734 2.726821 TGGAAGTGAAGCCATCCATTC 58.273 47.619 0.00 0.00 37.05 2.67
1931 2735 2.905415 TGGAAGTGAAGCCATCCATT 57.095 45.000 0.00 0.00 37.05 3.16
1932 2736 2.905415 TTGGAAGTGAAGCCATCCAT 57.095 45.000 0.00 0.00 41.36 3.41
1933 2737 2.905415 ATTGGAAGTGAAGCCATCCA 57.095 45.000 0.00 0.00 40.10 3.41
1934 2738 3.766051 AGAAATTGGAAGTGAAGCCATCC 59.234 43.478 0.00 0.00 33.46 3.51
1935 2739 4.219288 ACAGAAATTGGAAGTGAAGCCATC 59.781 41.667 0.00 0.00 33.46 3.51
1936 2740 4.154942 ACAGAAATTGGAAGTGAAGCCAT 58.845 39.130 0.00 0.00 33.46 4.40
1937 2741 3.565307 ACAGAAATTGGAAGTGAAGCCA 58.435 40.909 0.00 0.00 0.00 4.75
1938 2742 5.003804 TCTACAGAAATTGGAAGTGAAGCC 58.996 41.667 0.00 0.00 0.00 4.35
1939 2743 5.123027 CCTCTACAGAAATTGGAAGTGAAGC 59.877 44.000 0.00 0.00 0.00 3.86
1940 2744 5.123027 GCCTCTACAGAAATTGGAAGTGAAG 59.877 44.000 0.00 0.00 0.00 3.02
1941 2745 5.003804 GCCTCTACAGAAATTGGAAGTGAA 58.996 41.667 0.00 0.00 0.00 3.18
1942 2746 4.041567 TGCCTCTACAGAAATTGGAAGTGA 59.958 41.667 0.00 0.00 0.00 3.41
1943 2747 4.326826 TGCCTCTACAGAAATTGGAAGTG 58.673 43.478 0.00 0.00 0.00 3.16
1944 2748 4.042187 ACTGCCTCTACAGAAATTGGAAGT 59.958 41.667 0.00 0.00 40.25 3.01
1945 2749 4.394300 CACTGCCTCTACAGAAATTGGAAG 59.606 45.833 0.00 0.00 40.25 3.46
1946 2750 4.041567 TCACTGCCTCTACAGAAATTGGAA 59.958 41.667 0.00 0.00 40.25 3.53
1947 2751 3.582647 TCACTGCCTCTACAGAAATTGGA 59.417 43.478 0.00 0.00 40.25 3.53
1948 2752 3.942829 TCACTGCCTCTACAGAAATTGG 58.057 45.455 0.00 0.00 40.25 3.16
1949 2753 5.181009 TCATCACTGCCTCTACAGAAATTG 58.819 41.667 0.00 0.00 40.25 2.32
1950 2754 5.426689 TCATCACTGCCTCTACAGAAATT 57.573 39.130 0.00 0.00 40.25 1.82
1951 2755 5.366460 CATCATCACTGCCTCTACAGAAAT 58.634 41.667 0.00 0.00 40.25 2.17
1952 2756 4.383444 CCATCATCACTGCCTCTACAGAAA 60.383 45.833 0.00 0.00 40.25 2.52
1953 2757 3.133542 CCATCATCACTGCCTCTACAGAA 59.866 47.826 0.00 0.00 40.25 3.02
1954 2758 2.697229 CCATCATCACTGCCTCTACAGA 59.303 50.000 0.00 0.00 40.25 3.41
1955 2759 2.697229 TCCATCATCACTGCCTCTACAG 59.303 50.000 0.00 0.00 43.59 2.74
1956 2760 2.697229 CTCCATCATCACTGCCTCTACA 59.303 50.000 0.00 0.00 0.00 2.74
1957 2761 2.697751 ACTCCATCATCACTGCCTCTAC 59.302 50.000 0.00 0.00 0.00 2.59
1958 2762 3.037851 ACTCCATCATCACTGCCTCTA 57.962 47.619 0.00 0.00 0.00 2.43
1959 2763 1.876849 ACTCCATCATCACTGCCTCT 58.123 50.000 0.00 0.00 0.00 3.69
1960 2764 2.036992 CCTACTCCATCATCACTGCCTC 59.963 54.545 0.00 0.00 0.00 4.70
1961 2765 2.045524 CCTACTCCATCATCACTGCCT 58.954 52.381 0.00 0.00 0.00 4.75
1962 2766 1.765314 ACCTACTCCATCATCACTGCC 59.235 52.381 0.00 0.00 0.00 4.85
1963 2767 3.118629 TGAACCTACTCCATCATCACTGC 60.119 47.826 0.00 0.00 0.00 4.40
1964 2768 4.743057 TGAACCTACTCCATCATCACTG 57.257 45.455 0.00 0.00 0.00 3.66
1965 2769 5.664908 AGAATGAACCTACTCCATCATCACT 59.335 40.000 0.00 0.00 31.58 3.41
1966 2770 5.757320 CAGAATGAACCTACTCCATCATCAC 59.243 44.000 0.00 0.00 39.69 3.06
1967 2771 5.685861 GCAGAATGAACCTACTCCATCATCA 60.686 44.000 0.00 0.00 39.69 3.07
1968 2772 4.754114 GCAGAATGAACCTACTCCATCATC 59.246 45.833 0.00 0.00 39.69 2.92
1969 2773 4.411540 AGCAGAATGAACCTACTCCATCAT 59.588 41.667 0.00 0.00 39.69 2.45
1970 2774 3.776969 AGCAGAATGAACCTACTCCATCA 59.223 43.478 0.00 0.00 39.69 3.07
1971 2775 4.414337 AGCAGAATGAACCTACTCCATC 57.586 45.455 0.00 0.00 39.69 3.51
1972 2776 4.384647 GGAAGCAGAATGAACCTACTCCAT 60.385 45.833 0.00 0.00 39.69 3.41
1973 2777 3.055094 GGAAGCAGAATGAACCTACTCCA 60.055 47.826 0.00 0.00 39.69 3.86
1974 2778 3.536570 GGAAGCAGAATGAACCTACTCC 58.463 50.000 0.00 0.00 39.69 3.85
1975 2779 3.190874 CGGAAGCAGAATGAACCTACTC 58.809 50.000 0.00 0.00 39.69 2.59
1976 2780 2.567615 ACGGAAGCAGAATGAACCTACT 59.432 45.455 0.00 0.00 39.69 2.57
1977 2781 2.973945 ACGGAAGCAGAATGAACCTAC 58.026 47.619 0.00 0.00 39.69 3.18
1978 2782 3.334691 CAACGGAAGCAGAATGAACCTA 58.665 45.455 0.00 0.00 39.69 3.08
1979 2783 2.154462 CAACGGAAGCAGAATGAACCT 58.846 47.619 0.00 0.00 39.69 3.50
1980 2784 1.200020 CCAACGGAAGCAGAATGAACC 59.800 52.381 0.00 0.00 39.69 3.62
1981 2785 2.095718 GTCCAACGGAAGCAGAATGAAC 60.096 50.000 0.00 0.00 32.09 3.18
1982 2786 2.151202 GTCCAACGGAAGCAGAATGAA 58.849 47.619 0.00 0.00 32.09 2.57
1983 2787 1.808411 GTCCAACGGAAGCAGAATGA 58.192 50.000 0.00 0.00 32.09 2.57
1984 2788 0.443869 CGTCCAACGGAAGCAGAATG 59.556 55.000 0.00 0.00 38.08 2.67
1985 2789 0.320374 TCGTCCAACGGAAGCAGAAT 59.680 50.000 0.00 0.00 42.81 2.40
1986 2790 0.320374 ATCGTCCAACGGAAGCAGAA 59.680 50.000 0.00 0.00 42.81 3.02
1987 2791 0.389817 CATCGTCCAACGGAAGCAGA 60.390 55.000 0.00 0.00 42.81 4.26
1988 2792 0.670546 ACATCGTCCAACGGAAGCAG 60.671 55.000 0.00 0.00 42.81 4.24
1989 2793 0.948623 CACATCGTCCAACGGAAGCA 60.949 55.000 0.00 0.00 42.81 3.91
1990 2794 0.949105 ACACATCGTCCAACGGAAGC 60.949 55.000 0.00 0.00 42.81 3.86
1991 2795 1.990563 GTACACATCGTCCAACGGAAG 59.009 52.381 0.00 0.00 42.81 3.46
1992 2796 1.340568 TGTACACATCGTCCAACGGAA 59.659 47.619 0.00 0.00 42.81 4.30
1993 2797 0.960286 TGTACACATCGTCCAACGGA 59.040 50.000 0.00 0.00 42.81 4.69
1994 2798 1.658596 CATGTACACATCGTCCAACGG 59.341 52.381 0.00 0.00 42.81 4.44
1995 2799 2.092055 CACATGTACACATCGTCCAACG 59.908 50.000 0.00 0.00 44.19 4.10
1996 2800 2.415168 CCACATGTACACATCGTCCAAC 59.585 50.000 0.00 0.00 33.61 3.77
1997 2801 2.694213 CCACATGTACACATCGTCCAA 58.306 47.619 0.00 0.00 33.61 3.53
1998 2802 1.674519 GCCACATGTACACATCGTCCA 60.675 52.381 0.00 0.00 33.61 4.02
1999 2803 1.006832 GCCACATGTACACATCGTCC 58.993 55.000 0.00 0.00 33.61 4.79
2000 2804 1.660607 CTGCCACATGTACACATCGTC 59.339 52.381 0.00 0.00 33.61 4.20
2001 2805 1.275010 TCTGCCACATGTACACATCGT 59.725 47.619 0.00 0.00 33.61 3.73
2002 2806 2.008752 TCTGCCACATGTACACATCG 57.991 50.000 0.00 0.00 33.61 3.84
2003 2807 3.073678 TGTTCTGCCACATGTACACATC 58.926 45.455 0.00 0.00 33.61 3.06
2004 2808 3.138884 TGTTCTGCCACATGTACACAT 57.861 42.857 0.00 0.00 36.96 3.21
2005 2809 2.629336 TGTTCTGCCACATGTACACA 57.371 45.000 0.00 0.00 0.00 3.72
2006 2810 3.980646 TTTGTTCTGCCACATGTACAC 57.019 42.857 0.00 0.00 0.00 2.90
2007 2811 3.242903 CGTTTTGTTCTGCCACATGTACA 60.243 43.478 0.00 0.00 0.00 2.90
2008 2812 3.002862 TCGTTTTGTTCTGCCACATGTAC 59.997 43.478 0.00 0.00 0.00 2.90
2009 2813 3.206964 TCGTTTTGTTCTGCCACATGTA 58.793 40.909 0.00 0.00 0.00 2.29
2010 2814 2.020720 TCGTTTTGTTCTGCCACATGT 58.979 42.857 0.00 0.00 0.00 3.21
2011 2815 2.772568 TCGTTTTGTTCTGCCACATG 57.227 45.000 0.00 0.00 0.00 3.21
2012 2816 3.380004 TCTTTCGTTTTGTTCTGCCACAT 59.620 39.130 0.00 0.00 0.00 3.21
2013 2817 2.750166 TCTTTCGTTTTGTTCTGCCACA 59.250 40.909 0.00 0.00 0.00 4.17
2014 2818 3.414549 TCTTTCGTTTTGTTCTGCCAC 57.585 42.857 0.00 0.00 0.00 5.01
2015 2819 3.629855 TCATCTTTCGTTTTGTTCTGCCA 59.370 39.130 0.00 0.00 0.00 4.92
2016 2820 3.975035 GTCATCTTTCGTTTTGTTCTGCC 59.025 43.478 0.00 0.00 0.00 4.85
2017 2821 4.597079 TGTCATCTTTCGTTTTGTTCTGC 58.403 39.130 0.00 0.00 0.00 4.26
2018 2822 5.207768 CCTGTCATCTTTCGTTTTGTTCTG 58.792 41.667 0.00 0.00 0.00 3.02
2019 2823 4.881850 ACCTGTCATCTTTCGTTTTGTTCT 59.118 37.500 0.00 0.00 0.00 3.01
2020 2824 5.169836 ACCTGTCATCTTTCGTTTTGTTC 57.830 39.130 0.00 0.00 0.00 3.18
2021 2825 5.339990 CAACCTGTCATCTTTCGTTTTGTT 58.660 37.500 0.00 0.00 0.00 2.83
2022 2826 4.733523 GCAACCTGTCATCTTTCGTTTTGT 60.734 41.667 0.00 0.00 0.00 2.83
2023 2827 3.730715 GCAACCTGTCATCTTTCGTTTTG 59.269 43.478 0.00 0.00 0.00 2.44
2024 2828 3.632145 AGCAACCTGTCATCTTTCGTTTT 59.368 39.130 0.00 0.00 0.00 2.43
2025 2829 3.214328 AGCAACCTGTCATCTTTCGTTT 58.786 40.909 0.00 0.00 0.00 3.60
2026 2830 2.808543 GAGCAACCTGTCATCTTTCGTT 59.191 45.455 0.00 0.00 0.00 3.85
2027 2831 2.037772 AGAGCAACCTGTCATCTTTCGT 59.962 45.455 0.00 0.00 0.00 3.85
2028 2832 2.670414 GAGAGCAACCTGTCATCTTTCG 59.330 50.000 0.00 0.00 31.96 3.46
2029 2833 2.670414 CGAGAGCAACCTGTCATCTTTC 59.330 50.000 0.00 0.00 31.12 2.62
2030 2834 2.037772 ACGAGAGCAACCTGTCATCTTT 59.962 45.455 0.00 0.00 31.12 2.52
2031 2835 1.620819 ACGAGAGCAACCTGTCATCTT 59.379 47.619 0.00 0.00 31.12 2.40
2032 2836 1.067283 CACGAGAGCAACCTGTCATCT 60.067 52.381 0.00 0.00 31.12 2.90
2033 2837 1.354040 CACGAGAGCAACCTGTCATC 58.646 55.000 0.00 0.00 31.12 2.92
2034 2838 0.036952 CCACGAGAGCAACCTGTCAT 60.037 55.000 0.00 0.00 31.12 3.06
2035 2839 1.367471 CCACGAGAGCAACCTGTCA 59.633 57.895 0.00 0.00 31.12 3.58
2036 2840 0.249911 AACCACGAGAGCAACCTGTC 60.250 55.000 0.00 0.00 0.00 3.51
2037 2841 0.249911 GAACCACGAGAGCAACCTGT 60.250 55.000 0.00 0.00 0.00 4.00
2038 2842 0.951040 GGAACCACGAGAGCAACCTG 60.951 60.000 0.00 0.00 0.00 4.00
2039 2843 1.371558 GGAACCACGAGAGCAACCT 59.628 57.895 0.00 0.00 0.00 3.50
2040 2844 0.321653 ATGGAACCACGAGAGCAACC 60.322 55.000 0.00 0.00 0.00 3.77
2041 2845 1.464997 GAATGGAACCACGAGAGCAAC 59.535 52.381 0.00 0.00 0.00 4.17
2042 2846 1.610624 GGAATGGAACCACGAGAGCAA 60.611 52.381 0.00 0.00 0.00 3.91
2043 2847 0.036388 GGAATGGAACCACGAGAGCA 60.036 55.000 0.00 0.00 0.00 4.26
2044 2848 0.250513 AGGAATGGAACCACGAGAGC 59.749 55.000 0.00 0.00 0.00 4.09
2045 2849 2.770164 AAGGAATGGAACCACGAGAG 57.230 50.000 0.00 0.00 0.00 3.20
2046 2850 3.502123 AAAAGGAATGGAACCACGAGA 57.498 42.857 0.00 0.00 0.00 4.04
2047 2851 3.821033 AGAAAAAGGAATGGAACCACGAG 59.179 43.478 0.00 0.00 0.00 4.18
2048 2852 3.568007 CAGAAAAAGGAATGGAACCACGA 59.432 43.478 0.00 0.00 0.00 4.35
2049 2853 3.857010 GCAGAAAAAGGAATGGAACCACG 60.857 47.826 0.00 0.00 0.00 4.94
2050 2854 3.321968 AGCAGAAAAAGGAATGGAACCAC 59.678 43.478 0.00 0.00 0.00 4.16
2051 2855 3.573967 GAGCAGAAAAAGGAATGGAACCA 59.426 43.478 0.00 0.00 0.00 3.67
2052 2856 3.829026 AGAGCAGAAAAAGGAATGGAACC 59.171 43.478 0.00 0.00 0.00 3.62
2053 2857 5.010012 TCAAGAGCAGAAAAAGGAATGGAAC 59.990 40.000 0.00 0.00 0.00 3.62
2054 2858 5.139727 TCAAGAGCAGAAAAAGGAATGGAA 58.860 37.500 0.00 0.00 0.00 3.53
2055 2859 4.728772 TCAAGAGCAGAAAAAGGAATGGA 58.271 39.130 0.00 0.00 0.00 3.41
2056 2860 5.458041 TTCAAGAGCAGAAAAAGGAATGG 57.542 39.130 0.00 0.00 0.00 3.16
2057 2861 7.149973 TGATTTCAAGAGCAGAAAAAGGAATG 58.850 34.615 0.00 0.00 38.36 2.67
2058 2862 7.294017 TGATTTCAAGAGCAGAAAAAGGAAT 57.706 32.000 0.00 0.00 38.36 3.01
2059 2863 6.713762 TGATTTCAAGAGCAGAAAAAGGAA 57.286 33.333 0.00 0.00 38.36 3.36
2060 2864 6.713762 TTGATTTCAAGAGCAGAAAAAGGA 57.286 33.333 0.00 0.00 38.36 3.36
2061 2865 7.958053 AATTGATTTCAAGAGCAGAAAAAGG 57.042 32.000 0.00 0.00 39.47 3.11
2089 2893 4.345859 TCTAGCAGACCCGAAAGAAAAA 57.654 40.909 0.00 0.00 0.00 1.94
2090 2894 4.553330 ATCTAGCAGACCCGAAAGAAAA 57.447 40.909 0.00 0.00 0.00 2.29
2091 2895 5.362717 TCATATCTAGCAGACCCGAAAGAAA 59.637 40.000 0.00 0.00 0.00 2.52
2092 2896 4.893524 TCATATCTAGCAGACCCGAAAGAA 59.106 41.667 0.00 0.00 0.00 2.52
2093 2897 4.470602 TCATATCTAGCAGACCCGAAAGA 58.529 43.478 0.00 0.00 0.00 2.52
2094 2898 4.321601 CCTCATATCTAGCAGACCCGAAAG 60.322 50.000 0.00 0.00 0.00 2.62
2095 2899 3.574396 CCTCATATCTAGCAGACCCGAAA 59.426 47.826 0.00 0.00 0.00 3.46
2096 2900 3.157881 CCTCATATCTAGCAGACCCGAA 58.842 50.000 0.00 0.00 0.00 4.30
2097 2901 2.108425 ACCTCATATCTAGCAGACCCGA 59.892 50.000 0.00 0.00 0.00 5.14
2098 2902 2.230025 CACCTCATATCTAGCAGACCCG 59.770 54.545 0.00 0.00 0.00 5.28
2099 2903 2.028567 GCACCTCATATCTAGCAGACCC 60.029 54.545 0.00 0.00 0.00 4.46
2100 2904 2.028567 GGCACCTCATATCTAGCAGACC 60.029 54.545 0.00 0.00 0.00 3.85
2101 2905 2.896685 AGGCACCTCATATCTAGCAGAC 59.103 50.000 0.00 0.00 0.00 3.51
2102 2906 3.251016 AGGCACCTCATATCTAGCAGA 57.749 47.619 0.00 0.00 0.00 4.26
2103 2907 5.474578 TTTAGGCACCTCATATCTAGCAG 57.525 43.478 0.00 0.00 0.00 4.24
2104 2908 6.439636 AATTTAGGCACCTCATATCTAGCA 57.560 37.500 0.00 0.00 0.00 3.49
2105 2909 7.751768 AAAATTTAGGCACCTCATATCTAGC 57.248 36.000 0.00 0.00 0.00 3.42
2127 2931 1.827315 CGACTGACCGCGAGCAAAAA 61.827 55.000 8.23 0.00 0.00 1.94
2128 2932 2.307309 CGACTGACCGCGAGCAAAA 61.307 57.895 8.23 0.00 0.00 2.44
2129 2933 2.486636 ATCGACTGACCGCGAGCAAA 62.487 55.000 8.23 0.00 40.14 3.68
2130 2934 2.486636 AATCGACTGACCGCGAGCAA 62.487 55.000 8.23 0.00 40.14 3.91
2131 2935 2.867333 GAATCGACTGACCGCGAGCA 62.867 60.000 8.23 3.83 40.14 4.26
2132 2936 2.202623 AATCGACTGACCGCGAGC 60.203 61.111 8.23 0.00 40.14 5.03
2133 2937 0.863538 CAGAATCGACTGACCGCGAG 60.864 60.000 8.23 0.00 40.14 5.03
2134 2938 1.136774 CAGAATCGACTGACCGCGA 59.863 57.895 8.23 0.00 39.94 5.87
2135 2939 0.456142 TTCAGAATCGACTGACCGCG 60.456 55.000 5.30 0.00 44.94 6.46
2136 2940 0.992802 GTTCAGAATCGACTGACCGC 59.007 55.000 5.30 0.00 44.94 5.68
2137 2941 1.260206 CGTTCAGAATCGACTGACCG 58.740 55.000 8.24 8.24 44.94 4.79
2138 2942 2.520979 CTCGTTCAGAATCGACTGACC 58.479 52.381 5.30 0.00 44.94 4.02
2139 2943 2.520979 CCTCGTTCAGAATCGACTGAC 58.479 52.381 5.30 1.72 44.94 3.51
2140 2944 1.135373 GCCTCGTTCAGAATCGACTGA 60.135 52.381 1.80 1.80 43.83 3.41
2141 2945 1.272781 GCCTCGTTCAGAATCGACTG 58.727 55.000 0.00 0.00 39.02 3.51
2142 2946 0.173708 GGCCTCGTTCAGAATCGACT 59.826 55.000 0.00 0.00 32.65 4.18
2143 2947 1.140407 CGGCCTCGTTCAGAATCGAC 61.140 60.000 0.00 0.00 32.65 4.20
2144 2948 1.138883 CGGCCTCGTTCAGAATCGA 59.861 57.895 0.00 0.00 34.88 3.59
2145 2949 0.457853 TTCGGCCTCGTTCAGAATCG 60.458 55.000 0.00 0.00 37.69 3.34
2146 2950 1.281899 CTTCGGCCTCGTTCAGAATC 58.718 55.000 0.00 0.00 37.69 2.52
2147 2951 0.108138 CCTTCGGCCTCGTTCAGAAT 60.108 55.000 0.00 0.00 37.69 2.40
2148 2952 1.292223 CCTTCGGCCTCGTTCAGAA 59.708 57.895 0.00 0.00 37.69 3.02
2149 2953 2.646175 CCCTTCGGCCTCGTTCAGA 61.646 63.158 0.00 0.00 37.69 3.27
2150 2954 2.125512 CCCTTCGGCCTCGTTCAG 60.126 66.667 0.00 0.00 37.69 3.02
2151 2955 2.920912 ACCCTTCGGCCTCGTTCA 60.921 61.111 0.00 0.00 37.69 3.18
2152 2956 2.434359 CACCCTTCGGCCTCGTTC 60.434 66.667 0.00 0.00 37.69 3.95
2153 2957 2.920912 TCACCCTTCGGCCTCGTT 60.921 61.111 0.00 0.00 37.69 3.85
2154 2958 3.692406 GTCACCCTTCGGCCTCGT 61.692 66.667 0.00 0.00 37.69 4.18
2155 2959 4.796231 CGTCACCCTTCGGCCTCG 62.796 72.222 0.00 0.00 37.82 4.63
2156 2960 3.692406 ACGTCACCCTTCGGCCTC 61.692 66.667 0.00 0.00 0.00 4.70
2157 2961 4.003788 CACGTCACCCTTCGGCCT 62.004 66.667 0.00 0.00 0.00 5.19
2158 2962 4.309950 ACACGTCACCCTTCGGCC 62.310 66.667 0.00 0.00 0.00 6.13
2159 2963 2.737376 GACACGTCACCCTTCGGC 60.737 66.667 0.00 0.00 0.00 5.54
2160 2964 2.430244 CGACACGTCACCCTTCGG 60.430 66.667 0.00 0.00 0.00 4.30
2161 2965 1.442184 CTCGACACGTCACCCTTCG 60.442 63.158 0.00 0.00 0.00 3.79
2162 2966 1.733399 GCTCGACACGTCACCCTTC 60.733 63.158 0.00 0.00 0.00 3.46
2163 2967 2.338984 GCTCGACACGTCACCCTT 59.661 61.111 0.00 0.00 0.00 3.95
2164 2968 4.039357 CGCTCGACACGTCACCCT 62.039 66.667 0.00 0.00 0.00 4.34
2174 2978 4.838486 CTCCTCACCGCGCTCGAC 62.838 72.222 5.56 0.00 38.10 4.20
2176 2980 4.544689 CTCTCCTCACCGCGCTCG 62.545 72.222 5.56 0.00 0.00 5.03
2177 2981 4.863925 GCTCTCCTCACCGCGCTC 62.864 72.222 5.56 0.00 0.00 5.03
2180 2984 3.753434 ACAGCTCTCCTCACCGCG 61.753 66.667 0.00 0.00 0.00 6.46
2181 2985 1.954362 ATCACAGCTCTCCTCACCGC 61.954 60.000 0.00 0.00 0.00 5.68
2182 2986 0.179116 CATCACAGCTCTCCTCACCG 60.179 60.000 0.00 0.00 0.00 4.94
2183 2987 0.901124 ACATCACAGCTCTCCTCACC 59.099 55.000 0.00 0.00 0.00 4.02
2184 2988 2.615869 GAACATCACAGCTCTCCTCAC 58.384 52.381 0.00 0.00 0.00 3.51
2185 2989 1.552337 GGAACATCACAGCTCTCCTCA 59.448 52.381 0.00 0.00 0.00 3.86
2186 2990 1.552337 TGGAACATCACAGCTCTCCTC 59.448 52.381 0.00 0.00 0.00 3.71
2187 2991 1.649321 TGGAACATCACAGCTCTCCT 58.351 50.000 0.00 0.00 0.00 3.69
2188 2992 2.479566 TTGGAACATCACAGCTCTCC 57.520 50.000 0.00 0.00 39.30 3.71
2189 2993 3.141398 TGTTTGGAACATCACAGCTCTC 58.859 45.455 0.00 0.00 39.30 3.20
2190 2994 3.144506 CTGTTTGGAACATCACAGCTCT 58.855 45.455 0.00 0.00 41.17 4.09
2191 2995 3.141398 TCTGTTTGGAACATCACAGCTC 58.859 45.455 0.00 0.00 44.76 4.09
2192 2996 3.144506 CTCTGTTTGGAACATCACAGCT 58.855 45.455 0.00 0.00 44.76 4.24
2193 2997 2.227388 CCTCTGTTTGGAACATCACAGC 59.773 50.000 0.00 0.00 44.76 4.40
2194 2998 2.227388 GCCTCTGTTTGGAACATCACAG 59.773 50.000 0.00 0.00 45.81 3.66
2195 2999 2.229792 GCCTCTGTTTGGAACATCACA 58.770 47.619 0.00 0.00 41.26 3.58
2196 3000 1.197721 CGCCTCTGTTTGGAACATCAC 59.802 52.381 0.00 0.00 41.26 3.06
2197 3001 1.071542 TCGCCTCTGTTTGGAACATCA 59.928 47.619 0.00 0.00 41.26 3.07
2198 3002 1.734465 CTCGCCTCTGTTTGGAACATC 59.266 52.381 0.00 0.00 41.26 3.06
2199 3003 1.611673 CCTCGCCTCTGTTTGGAACAT 60.612 52.381 0.00 0.00 41.26 2.71
2200 3004 0.250295 CCTCGCCTCTGTTTGGAACA 60.250 55.000 0.00 0.00 39.52 3.18
2201 3005 0.034896 TCCTCGCCTCTGTTTGGAAC 59.965 55.000 0.00 0.00 0.00 3.62
2202 3006 0.762418 TTCCTCGCCTCTGTTTGGAA 59.238 50.000 0.00 0.00 0.00 3.53
2203 3007 0.321671 CTTCCTCGCCTCTGTTTGGA 59.678 55.000 0.00 0.00 0.00 3.53
2204 3008 1.301677 GCTTCCTCGCCTCTGTTTGG 61.302 60.000 0.00 0.00 0.00 3.28
2205 3009 1.630244 CGCTTCCTCGCCTCTGTTTG 61.630 60.000 0.00 0.00 0.00 2.93
2206 3010 1.374758 CGCTTCCTCGCCTCTGTTT 60.375 57.895 0.00 0.00 0.00 2.83
2207 3011 2.262915 CGCTTCCTCGCCTCTGTT 59.737 61.111 0.00 0.00 0.00 3.16
2208 3012 3.764466 CCGCTTCCTCGCCTCTGT 61.764 66.667 0.00 0.00 0.00 3.41
2209 3013 4.521062 CCCGCTTCCTCGCCTCTG 62.521 72.222 0.00 0.00 0.00 3.35
2211 3015 4.083862 AACCCGCTTCCTCGCCTC 62.084 66.667 0.00 0.00 0.00 4.70
2212 3016 4.394712 CAACCCGCTTCCTCGCCT 62.395 66.667 0.00 0.00 0.00 5.52
2213 3017 3.682292 ATCAACCCGCTTCCTCGCC 62.682 63.158 0.00 0.00 0.00 5.54
2214 3018 2.125106 ATCAACCCGCTTCCTCGC 60.125 61.111 0.00 0.00 0.00 5.03
2215 3019 1.084370 GTCATCAACCCGCTTCCTCG 61.084 60.000 0.00 0.00 0.00 4.63
2216 3020 0.250513 AGTCATCAACCCGCTTCCTC 59.749 55.000 0.00 0.00 0.00 3.71
2217 3021 0.036010 CAGTCATCAACCCGCTTCCT 60.036 55.000 0.00 0.00 0.00 3.36
2218 3022 1.026718 CCAGTCATCAACCCGCTTCC 61.027 60.000 0.00 0.00 0.00 3.46
2219 3023 0.321653 ACCAGTCATCAACCCGCTTC 60.322 55.000 0.00 0.00 0.00 3.86
2220 3024 0.606401 CACCAGTCATCAACCCGCTT 60.606 55.000 0.00 0.00 0.00 4.68
2221 3025 1.003355 CACCAGTCATCAACCCGCT 60.003 57.895 0.00 0.00 0.00 5.52
2222 3026 2.690778 GCACCAGTCATCAACCCGC 61.691 63.158 0.00 0.00 0.00 6.13
2223 3027 1.300971 CTGCACCAGTCATCAACCCG 61.301 60.000 0.00 0.00 0.00 5.28
2224 3028 0.036732 TCTGCACCAGTCATCAACCC 59.963 55.000 0.00 0.00 32.61 4.11
2225 3029 2.012673 GATCTGCACCAGTCATCAACC 58.987 52.381 0.00 0.00 32.61 3.77
2226 3030 1.662629 CGATCTGCACCAGTCATCAAC 59.337 52.381 0.00 0.00 32.61 3.18
2227 3031 1.405933 CCGATCTGCACCAGTCATCAA 60.406 52.381 0.00 0.00 32.61 2.57
2228 3032 0.176449 CCGATCTGCACCAGTCATCA 59.824 55.000 0.00 0.00 32.61 3.07
2229 3033 0.461548 TCCGATCTGCACCAGTCATC 59.538 55.000 0.00 0.00 32.61 2.92
2230 3034 0.463204 CTCCGATCTGCACCAGTCAT 59.537 55.000 0.00 0.00 32.61 3.06
2231 3035 1.607801 CCTCCGATCTGCACCAGTCA 61.608 60.000 0.00 0.00 32.61 3.41
2232 3036 1.142748 CCTCCGATCTGCACCAGTC 59.857 63.158 0.00 0.00 32.61 3.51
2233 3037 2.362369 CCCTCCGATCTGCACCAGT 61.362 63.158 0.00 0.00 32.61 4.00
2234 3038 2.503061 CCCTCCGATCTGCACCAG 59.497 66.667 0.00 0.00 0.00 4.00
2235 3039 3.083349 CCCCTCCGATCTGCACCA 61.083 66.667 0.00 0.00 0.00 4.17
2236 3040 3.866582 CCCCCTCCGATCTGCACC 61.867 72.222 0.00 0.00 0.00 5.01
2264 3068 2.461903 GATCTTAAGTTCTCCGGCGAC 58.538 52.381 9.30 0.00 0.00 5.19
2265 3069 1.065102 CGATCTTAAGTTCTCCGGCGA 59.935 52.381 9.30 0.00 0.00 5.54
2266 3070 1.478137 CGATCTTAAGTTCTCCGGCG 58.522 55.000 0.00 0.00 0.00 6.46
2267 3071 1.407979 TCCGATCTTAAGTTCTCCGGC 59.592 52.381 10.95 0.00 35.86 6.13
2268 3072 2.034812 CCTCCGATCTTAAGTTCTCCGG 59.965 54.545 10.95 0.00 37.08 5.14
2269 3073 2.034812 CCCTCCGATCTTAAGTTCTCCG 59.965 54.545 10.95 5.31 0.00 4.63
2270 3074 3.032459 ACCCTCCGATCTTAAGTTCTCC 58.968 50.000 10.95 0.00 0.00 3.71
2271 3075 4.159879 TGAACCCTCCGATCTTAAGTTCTC 59.840 45.833 10.95 3.12 34.62 2.87
2272 3076 4.094476 TGAACCCTCCGATCTTAAGTTCT 58.906 43.478 10.95 0.00 34.62 3.01
2273 3077 4.159879 TCTGAACCCTCCGATCTTAAGTTC 59.840 45.833 1.63 2.85 34.23 3.01
2274 3078 4.094476 TCTGAACCCTCCGATCTTAAGTT 58.906 43.478 1.63 0.00 0.00 2.66
2275 3079 3.702045 CTCTGAACCCTCCGATCTTAAGT 59.298 47.826 1.63 0.00 0.00 2.24
2276 3080 3.068873 CCTCTGAACCCTCCGATCTTAAG 59.931 52.174 0.00 0.00 0.00 1.85
2277 3081 3.031736 CCTCTGAACCCTCCGATCTTAA 58.968 50.000 0.00 0.00 0.00 1.85
2278 3082 2.243994 TCCTCTGAACCCTCCGATCTTA 59.756 50.000 0.00 0.00 0.00 2.10
2279 3083 1.007238 TCCTCTGAACCCTCCGATCTT 59.993 52.381 0.00 0.00 0.00 2.40
2280 3084 0.631753 TCCTCTGAACCCTCCGATCT 59.368 55.000 0.00 0.00 0.00 2.75
2281 3085 1.486211 TTCCTCTGAACCCTCCGATC 58.514 55.000 0.00 0.00 0.00 3.69
2282 3086 1.765314 CATTCCTCTGAACCCTCCGAT 59.235 52.381 0.00 0.00 32.13 4.18
2283 3087 1.195115 CATTCCTCTGAACCCTCCGA 58.805 55.000 0.00 0.00 32.13 4.55
2284 3088 0.179000 CCATTCCTCTGAACCCTCCG 59.821 60.000 0.00 0.00 32.13 4.63
2285 3089 0.106967 GCCATTCCTCTGAACCCTCC 60.107 60.000 0.00 0.00 32.13 4.30
2286 3090 0.106967 GGCCATTCCTCTGAACCCTC 60.107 60.000 0.00 0.00 32.13 4.30
2287 3091 0.551131 AGGCCATTCCTCTGAACCCT 60.551 55.000 5.01 0.00 43.20 4.34
2288 3092 0.332972 AAGGCCATTCCTCTGAACCC 59.667 55.000 5.01 0.00 46.94 4.11
2289 3093 1.467920 CAAGGCCATTCCTCTGAACC 58.532 55.000 5.01 0.00 46.94 3.62
2290 3094 1.004745 TCCAAGGCCATTCCTCTGAAC 59.995 52.381 5.01 0.00 46.94 3.18
2291 3095 1.004745 GTCCAAGGCCATTCCTCTGAA 59.995 52.381 5.01 0.00 46.94 3.02
2292 3096 0.620556 GTCCAAGGCCATTCCTCTGA 59.379 55.000 5.01 0.00 46.94 3.27
2293 3097 0.745845 CGTCCAAGGCCATTCCTCTG 60.746 60.000 5.01 0.00 46.94 3.35
2294 3098 1.604378 CGTCCAAGGCCATTCCTCT 59.396 57.895 5.01 0.00 46.94 3.69
2295 3099 1.452108 CCGTCCAAGGCCATTCCTC 60.452 63.158 5.01 0.00 46.94 3.71
2348 3152 3.191539 CTTCTTCCTCGCGCTGCC 61.192 66.667 5.56 0.00 0.00 4.85
2349 3153 1.691215 CTTCTTCTTCCTCGCGCTGC 61.691 60.000 5.56 0.00 0.00 5.25
2350 3154 0.109086 TCTTCTTCTTCCTCGCGCTG 60.109 55.000 5.56 0.00 0.00 5.18
2351 3155 0.820871 ATCTTCTTCTTCCTCGCGCT 59.179 50.000 5.56 0.00 0.00 5.92
2352 3156 1.204792 GATCTTCTTCTTCCTCGCGC 58.795 55.000 0.00 0.00 0.00 6.86
2353 3157 2.568696 TGATCTTCTTCTTCCTCGCG 57.431 50.000 0.00 0.00 0.00 5.87
2354 3158 5.809719 AAAATGATCTTCTTCTTCCTCGC 57.190 39.130 0.00 0.00 0.00 5.03
2375 3179 5.163468 TGCCAGTGCATTTTACTCTGAAAAA 60.163 36.000 0.00 0.00 44.23 1.94
2376 3180 4.340666 TGCCAGTGCATTTTACTCTGAAAA 59.659 37.500 0.00 0.00 44.23 2.29
2377 3181 3.888323 TGCCAGTGCATTTTACTCTGAAA 59.112 39.130 0.00 0.00 44.23 2.69
2378 3182 3.485394 TGCCAGTGCATTTTACTCTGAA 58.515 40.909 0.00 0.00 44.23 3.02
2379 3183 3.138884 TGCCAGTGCATTTTACTCTGA 57.861 42.857 0.00 0.00 44.23 3.27
2458 3271 5.509272 CGTACAAACACGTCTTGTCGTATAT 59.491 40.000 14.23 0.00 42.27 0.86
2459 3272 4.845598 CGTACAAACACGTCTTGTCGTATA 59.154 41.667 14.23 0.00 42.27 1.47
2527 3340 1.542328 CGTCCAGGATTGGTCAACACA 60.542 52.381 0.00 0.00 45.26 3.72
2597 3410 1.335496 GGCTAAAGCACAACGAACCAA 59.665 47.619 4.07 0.00 44.36 3.67
2639 3452 2.364324 CCTCCCCTCGTTATGATCGAAA 59.636 50.000 0.00 0.00 36.89 3.46
2673 3499 3.934962 GATCGCCTCCTCTGCCCC 61.935 72.222 0.00 0.00 0.00 5.80
2674 3500 4.292178 CGATCGCCTCCTCTGCCC 62.292 72.222 0.26 0.00 0.00 5.36
2675 3501 3.492311 GACGATCGCCTCCTCTGCC 62.492 68.421 16.60 0.00 0.00 4.85
2676 3502 2.026879 GACGATCGCCTCCTCTGC 59.973 66.667 16.60 0.00 0.00 4.26
2677 3503 2.329690 CGACGATCGCCTCCTCTG 59.670 66.667 16.60 0.00 31.14 3.35
2804 3631 2.227089 ATCTGGTCGACGAACAGGCC 62.227 60.000 35.54 17.28 46.33 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.