Multiple sequence alignment - TraesCS4D01G353900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G353900 chr4D 100.000 2414 0 0 1 2414 504100981 504098568 0.000000e+00 4458.0
1 TraesCS4D01G353900 chr4D 100.000 118 0 0 2251 2368 504098421 504098538 4.040000e-53 219.0
2 TraesCS4D01G353900 chr4D 92.063 126 7 3 212 335 447293814 447293690 8.870000e-40 174.0
3 TraesCS4D01G353900 chr4B 83.881 1005 93 26 615 1593 650690584 650689623 0.000000e+00 894.0
4 TraesCS4D01G353900 chr4B 90.566 424 23 9 1827 2244 650689257 650688845 1.630000e-151 545.0
5 TraesCS4D01G353900 chr4B 92.958 71 5 0 2264 2334 650688795 650688725 1.180000e-18 104.0
6 TraesCS4D01G353900 chr4B 97.368 38 1 0 2377 2414 650688651 650688688 5.570000e-07 65.8
7 TraesCS4D01G353900 chr5A 79.925 797 80 42 1457 2210 688767471 688766712 1.660000e-141 512.0
8 TraesCS4D01G353900 chr5A 87.766 376 23 10 983 1354 688768090 688767734 3.710000e-113 418.0
9 TraesCS4D01G353900 chr7D 92.800 125 9 0 212 336 428978343 428978219 5.300000e-42 182.0
10 TraesCS4D01G353900 chr3D 93.443 122 8 0 214 335 488863579 488863458 5.300000e-42 182.0
11 TraesCS4D01G353900 chr3D 92.683 123 7 2 214 335 529127161 529127282 2.470000e-40 176.0
12 TraesCS4D01G353900 chr5D 92.683 123 8 1 213 335 380078774 380078895 2.470000e-40 176.0
13 TraesCS4D01G353900 chr1D 92.000 125 8 2 212 335 367162530 367162653 8.870000e-40 174.0
14 TraesCS4D01G353900 chr1D 91.870 123 9 1 213 335 193367317 193367196 1.150000e-38 171.0
15 TraesCS4D01G353900 chr7B 91.935 124 9 1 212 335 637198287 637198409 3.190000e-39 172.0
16 TraesCS4D01G353900 chr3B 90.840 131 8 4 208 335 807942672 807942543 3.190000e-39 172.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G353900 chr4D 504098568 504100981 2413 True 4458.000000 4458 100.0000 1 2414 1 chr4D.!!$R2 2413
1 TraesCS4D01G353900 chr4B 650688725 650690584 1859 True 514.333333 894 89.1350 615 2334 3 chr4B.!!$R1 1719
2 TraesCS4D01G353900 chr5A 688766712 688768090 1378 True 465.000000 512 83.8455 983 2210 2 chr5A.!!$R1 1227

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
66 67 0.034059 ACAGCAAAGAGGAGGACACG 59.966 55.0 0.0 0.0 0.0 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1703 1951 0.041833 TTAGCTGGCTCCCTCTCTGT 59.958 55.0 0.0 0.0 0.0 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.844420 CCGAGGACAATCTCTGCC 57.156 61.111 0.00 0.00 0.00 4.85
18 19 1.227089 CCGAGGACAATCTCTGCCG 60.227 63.158 0.00 0.00 0.00 5.69
19 20 1.880340 CGAGGACAATCTCTGCCGC 60.880 63.158 0.00 0.00 0.00 6.53
20 21 1.522580 GAGGACAATCTCTGCCGCC 60.523 63.158 0.00 0.00 0.00 6.13
21 22 2.514824 GGACAATCTCTGCCGCCC 60.515 66.667 0.00 0.00 0.00 6.13
22 23 2.268920 GACAATCTCTGCCGCCCA 59.731 61.111 0.00 0.00 0.00 5.36
23 24 1.817099 GACAATCTCTGCCGCCCAG 60.817 63.158 0.00 0.00 43.17 4.45
24 25 3.207669 CAATCTCTGCCGCCCAGC 61.208 66.667 0.00 0.00 41.50 4.85
25 26 3.720601 AATCTCTGCCGCCCAGCA 61.721 61.111 0.00 0.00 41.50 4.41
26 27 3.984193 AATCTCTGCCGCCCAGCAC 62.984 63.158 0.00 0.00 41.50 4.40
35 36 2.672996 GCCCAGCACGTGTCCAAT 60.673 61.111 18.38 0.00 0.00 3.16
36 37 2.690778 GCCCAGCACGTGTCCAATC 61.691 63.158 18.38 0.00 0.00 2.67
37 38 1.003355 CCCAGCACGTGTCCAATCT 60.003 57.895 18.38 0.88 0.00 2.40
38 39 1.021390 CCCAGCACGTGTCCAATCTC 61.021 60.000 18.38 0.00 0.00 2.75
39 40 1.354337 CCAGCACGTGTCCAATCTCG 61.354 60.000 18.38 0.00 0.00 4.04
40 41 0.388520 CAGCACGTGTCCAATCTCGA 60.389 55.000 18.38 0.00 0.00 4.04
41 42 0.317160 AGCACGTGTCCAATCTCGAA 59.683 50.000 18.38 0.00 0.00 3.71
42 43 1.144969 GCACGTGTCCAATCTCGAAA 58.855 50.000 18.38 0.00 0.00 3.46
43 44 1.529438 GCACGTGTCCAATCTCGAAAA 59.471 47.619 18.38 0.00 0.00 2.29
44 45 2.661979 GCACGTGTCCAATCTCGAAAAC 60.662 50.000 18.38 0.00 0.00 2.43
45 46 2.800544 CACGTGTCCAATCTCGAAAACT 59.199 45.455 7.58 0.00 0.00 2.66
46 47 2.800544 ACGTGTCCAATCTCGAAAACTG 59.199 45.455 0.00 0.00 0.00 3.16
47 48 3.057019 CGTGTCCAATCTCGAAAACTGA 58.943 45.455 0.00 0.00 0.00 3.41
48 49 3.120991 CGTGTCCAATCTCGAAAACTGAC 60.121 47.826 0.00 0.00 0.00 3.51
49 50 3.807622 GTGTCCAATCTCGAAAACTGACA 59.192 43.478 3.46 3.46 0.00 3.58
50 51 4.058124 TGTCCAATCTCGAAAACTGACAG 58.942 43.478 0.00 0.00 0.00 3.51
51 52 3.067106 TCCAATCTCGAAAACTGACAGC 58.933 45.455 1.25 0.00 0.00 4.40
52 53 2.807967 CCAATCTCGAAAACTGACAGCA 59.192 45.455 1.25 0.00 0.00 4.41
53 54 3.250762 CCAATCTCGAAAACTGACAGCAA 59.749 43.478 1.25 0.00 0.00 3.91
54 55 4.261155 CCAATCTCGAAAACTGACAGCAAA 60.261 41.667 1.25 0.00 0.00 3.68
55 56 4.739046 ATCTCGAAAACTGACAGCAAAG 57.261 40.909 1.25 0.00 0.00 2.77
56 57 3.792401 TCTCGAAAACTGACAGCAAAGA 58.208 40.909 1.25 0.00 0.00 2.52
57 58 3.804325 TCTCGAAAACTGACAGCAAAGAG 59.196 43.478 1.25 5.88 0.00 2.85
58 59 2.872245 TCGAAAACTGACAGCAAAGAGG 59.128 45.455 1.25 0.00 0.00 3.69
59 60 2.872245 CGAAAACTGACAGCAAAGAGGA 59.128 45.455 1.25 0.00 0.00 3.71
60 61 3.059325 CGAAAACTGACAGCAAAGAGGAG 60.059 47.826 1.25 0.00 0.00 3.69
61 62 2.557920 AACTGACAGCAAAGAGGAGG 57.442 50.000 1.25 0.00 0.00 4.30
62 63 1.722034 ACTGACAGCAAAGAGGAGGA 58.278 50.000 1.25 0.00 0.00 3.71
63 64 1.346068 ACTGACAGCAAAGAGGAGGAC 59.654 52.381 1.25 0.00 0.00 3.85
64 65 1.345741 CTGACAGCAAAGAGGAGGACA 59.654 52.381 0.00 0.00 0.00 4.02
65 66 1.070758 TGACAGCAAAGAGGAGGACAC 59.929 52.381 0.00 0.00 0.00 3.67
66 67 0.034059 ACAGCAAAGAGGAGGACACG 59.966 55.000 0.00 0.00 0.00 4.49
67 68 0.671781 CAGCAAAGAGGAGGACACGG 60.672 60.000 0.00 0.00 0.00 4.94
68 69 2.035442 GCAAAGAGGAGGACACGGC 61.035 63.158 0.00 0.00 0.00 5.68
69 70 1.371183 CAAAGAGGAGGACACGGCA 59.629 57.895 0.00 0.00 0.00 5.69
70 71 0.951040 CAAAGAGGAGGACACGGCAC 60.951 60.000 0.00 0.00 0.00 5.01
71 72 1.407656 AAAGAGGAGGACACGGCACA 61.408 55.000 0.00 0.00 0.00 4.57
72 73 1.407656 AAGAGGAGGACACGGCACAA 61.408 55.000 0.00 0.00 0.00 3.33
73 74 1.374758 GAGGAGGACACGGCACAAG 60.375 63.158 0.00 0.00 0.00 3.16
74 75 1.816863 GAGGAGGACACGGCACAAGA 61.817 60.000 0.00 0.00 0.00 3.02
75 76 1.374758 GGAGGACACGGCACAAGAG 60.375 63.158 0.00 0.00 0.00 2.85
76 77 2.029844 GAGGACACGGCACAAGAGC 61.030 63.158 0.00 0.00 0.00 4.09
83 84 2.050077 GGCACAAGAGCCGCAAAC 60.050 61.111 0.00 0.00 46.12 2.93
84 85 2.050077 GCACAAGAGCCGCAAACC 60.050 61.111 0.00 0.00 0.00 3.27
85 86 2.252260 CACAAGAGCCGCAAACCG 59.748 61.111 0.00 0.00 0.00 4.44
86 87 2.203153 ACAAGAGCCGCAAACCGT 60.203 55.556 0.00 0.00 34.38 4.83
87 88 2.252260 CAAGAGCCGCAAACCGTG 59.748 61.111 0.00 0.00 34.38 4.94
96 97 3.893763 CAAACCGTGCGCACCCAA 61.894 61.111 33.23 0.00 0.00 4.12
97 98 3.141488 AAACCGTGCGCACCCAAA 61.141 55.556 33.23 0.00 0.00 3.28
98 99 2.711922 AAACCGTGCGCACCCAAAA 61.712 52.632 33.23 0.00 0.00 2.44
99 100 2.022240 AAACCGTGCGCACCCAAAAT 62.022 50.000 33.23 13.11 0.00 1.82
100 101 2.430582 CCGTGCGCACCCAAAATG 60.431 61.111 33.23 17.67 0.00 2.32
101 102 2.334653 CGTGCGCACCCAAAATGT 59.665 55.556 33.23 0.00 0.00 2.71
102 103 1.576920 CGTGCGCACCCAAAATGTA 59.423 52.632 33.23 0.00 0.00 2.29
103 104 0.454285 CGTGCGCACCCAAAATGTAG 60.454 55.000 33.23 12.39 0.00 2.74
104 105 0.109319 GTGCGCACCCAAAATGTAGG 60.109 55.000 30.12 0.00 0.00 3.18
113 114 4.301637 CCCAAAATGTAGGGTTTATCGC 57.698 45.455 0.00 0.00 40.34 4.58
114 115 3.242936 CCCAAAATGTAGGGTTTATCGCG 60.243 47.826 0.00 0.00 40.34 5.87
115 116 3.359654 CAAAATGTAGGGTTTATCGCGC 58.640 45.455 0.00 0.00 0.00 6.86
116 117 2.319136 AATGTAGGGTTTATCGCGCA 57.681 45.000 8.75 0.00 0.00 6.09
117 118 1.865865 ATGTAGGGTTTATCGCGCAG 58.134 50.000 8.75 0.00 0.00 5.18
132 133 1.800805 CGCAGCATCTATGGTAAGGG 58.199 55.000 0.00 0.00 36.64 3.95
133 134 1.344438 CGCAGCATCTATGGTAAGGGA 59.656 52.381 0.00 0.00 36.64 4.20
134 135 2.611473 CGCAGCATCTATGGTAAGGGAG 60.611 54.545 0.00 0.00 36.64 4.30
135 136 2.289945 GCAGCATCTATGGTAAGGGAGG 60.290 54.545 0.00 0.00 36.64 4.30
136 137 3.242867 CAGCATCTATGGTAAGGGAGGA 58.757 50.000 0.00 0.00 36.64 3.71
137 138 3.260380 CAGCATCTATGGTAAGGGAGGAG 59.740 52.174 0.00 0.00 36.64 3.69
138 139 3.142977 AGCATCTATGGTAAGGGAGGAGA 59.857 47.826 0.00 0.00 36.64 3.71
139 140 3.513515 GCATCTATGGTAAGGGAGGAGAG 59.486 52.174 0.00 0.00 0.00 3.20
140 141 3.905493 TCTATGGTAAGGGAGGAGAGG 57.095 52.381 0.00 0.00 0.00 3.69
141 142 3.414057 TCTATGGTAAGGGAGGAGAGGA 58.586 50.000 0.00 0.00 0.00 3.71
142 143 2.480642 ATGGTAAGGGAGGAGAGGAC 57.519 55.000 0.00 0.00 0.00 3.85
143 144 1.394532 TGGTAAGGGAGGAGAGGACT 58.605 55.000 0.00 0.00 0.00 3.85
144 145 1.007238 TGGTAAGGGAGGAGAGGACTG 59.993 57.143 0.00 0.00 0.00 3.51
145 146 1.116308 GTAAGGGAGGAGAGGACTGC 58.884 60.000 0.00 0.00 34.66 4.40
146 147 0.710588 TAAGGGAGGAGAGGACTGCA 59.289 55.000 0.00 0.00 36.93 4.41
147 148 0.617249 AAGGGAGGAGAGGACTGCAG 60.617 60.000 13.48 13.48 36.93 4.41
148 149 2.730524 GGGAGGAGAGGACTGCAGC 61.731 68.421 15.27 6.61 36.93 5.25
149 150 2.493973 GAGGAGAGGACTGCAGCG 59.506 66.667 15.27 0.00 36.93 5.18
150 151 2.036414 AGGAGAGGACTGCAGCGA 59.964 61.111 15.27 0.00 36.93 4.93
151 152 2.183046 GGAGAGGACTGCAGCGAC 59.817 66.667 15.27 4.00 34.59 5.19
152 153 2.202544 GAGAGGACTGCAGCGACG 60.203 66.667 15.27 0.00 0.00 5.12
153 154 3.691744 GAGAGGACTGCAGCGACGG 62.692 68.421 15.27 0.00 0.00 4.79
197 198 3.938112 GCCATAGGCGTCGTCATC 58.062 61.111 0.00 0.00 39.62 2.92
198 199 1.364171 GCCATAGGCGTCGTCATCT 59.636 57.895 0.00 0.00 39.62 2.90
199 200 0.664767 GCCATAGGCGTCGTCATCTC 60.665 60.000 0.00 0.00 39.62 2.75
200 201 0.668535 CCATAGGCGTCGTCATCTCA 59.331 55.000 0.00 0.00 0.00 3.27
201 202 1.270826 CCATAGGCGTCGTCATCTCAT 59.729 52.381 0.00 0.00 0.00 2.90
202 203 2.488153 CCATAGGCGTCGTCATCTCATA 59.512 50.000 0.00 0.00 0.00 2.15
203 204 3.493272 CATAGGCGTCGTCATCTCATAC 58.507 50.000 0.00 0.00 0.00 2.39
204 205 1.681538 AGGCGTCGTCATCTCATACT 58.318 50.000 0.00 0.00 0.00 2.12
205 206 2.847441 AGGCGTCGTCATCTCATACTA 58.153 47.619 0.00 0.00 0.00 1.82
206 207 2.809119 AGGCGTCGTCATCTCATACTAG 59.191 50.000 0.00 0.00 0.00 2.57
207 208 2.095668 GGCGTCGTCATCTCATACTAGG 60.096 54.545 0.00 0.00 0.00 3.02
208 209 2.548904 GCGTCGTCATCTCATACTAGGT 59.451 50.000 0.00 0.00 0.00 3.08
209 210 3.607310 GCGTCGTCATCTCATACTAGGTG 60.607 52.174 0.00 0.00 0.00 4.00
210 211 3.058846 CGTCGTCATCTCATACTAGGTGG 60.059 52.174 0.00 0.00 0.00 4.61
211 212 3.884091 GTCGTCATCTCATACTAGGTGGT 59.116 47.826 0.00 0.00 0.00 4.16
212 213 4.338682 GTCGTCATCTCATACTAGGTGGTT 59.661 45.833 0.00 0.00 0.00 3.67
213 214 4.338400 TCGTCATCTCATACTAGGTGGTTG 59.662 45.833 0.00 0.00 0.00 3.77
214 215 4.338400 CGTCATCTCATACTAGGTGGTTGA 59.662 45.833 0.00 0.00 0.00 3.18
215 216 5.506483 CGTCATCTCATACTAGGTGGTTGAG 60.506 48.000 0.00 0.00 36.09 3.02
216 217 4.895889 TCATCTCATACTAGGTGGTTGAGG 59.104 45.833 0.00 0.00 35.60 3.86
217 218 4.603094 TCTCATACTAGGTGGTTGAGGA 57.397 45.455 0.00 0.00 35.60 3.71
218 219 4.279145 TCTCATACTAGGTGGTTGAGGAC 58.721 47.826 0.00 0.00 35.60 3.85
219 220 3.021695 TCATACTAGGTGGTTGAGGACG 58.978 50.000 0.00 0.00 0.00 4.79
220 221 1.843368 TACTAGGTGGTTGAGGACGG 58.157 55.000 0.00 0.00 0.00 4.79
221 222 0.903454 ACTAGGTGGTTGAGGACGGG 60.903 60.000 0.00 0.00 0.00 5.28
222 223 1.611261 TAGGTGGTTGAGGACGGGG 60.611 63.158 0.00 0.00 0.00 5.73
223 224 4.717313 GGTGGTTGAGGACGGGGC 62.717 72.222 0.00 0.00 0.00 5.80
260 261 4.673375 AGCTGGGGTTGCTGCCAG 62.673 66.667 0.00 0.00 39.56 4.85
266 267 3.455469 GGTTGCTGCCAGCCCATC 61.455 66.667 15.29 0.00 41.51 3.51
267 268 3.455469 GTTGCTGCCAGCCCATCC 61.455 66.667 15.29 0.00 41.51 3.51
268 269 3.982111 TTGCTGCCAGCCCATCCA 61.982 61.111 15.29 0.00 41.51 3.41
269 270 3.526600 TTGCTGCCAGCCCATCCAA 62.527 57.895 15.29 0.00 41.51 3.53
270 271 3.145551 GCTGCCAGCCCATCCAAG 61.146 66.667 5.06 0.00 34.48 3.61
271 272 2.357836 CTGCCAGCCCATCCAAGT 59.642 61.111 0.00 0.00 0.00 3.16
272 273 1.304713 CTGCCAGCCCATCCAAGTT 60.305 57.895 0.00 0.00 0.00 2.66
273 274 1.304381 TGCCAGCCCATCCAAGTTC 60.304 57.895 0.00 0.00 0.00 3.01
274 275 2.409870 GCCAGCCCATCCAAGTTCG 61.410 63.158 0.00 0.00 0.00 3.95
275 276 1.299648 CCAGCCCATCCAAGTTCGA 59.700 57.895 0.00 0.00 0.00 3.71
276 277 0.745845 CCAGCCCATCCAAGTTCGAG 60.746 60.000 0.00 0.00 0.00 4.04
277 278 0.036010 CAGCCCATCCAAGTTCGAGT 60.036 55.000 0.00 0.00 0.00 4.18
278 279 0.250513 AGCCCATCCAAGTTCGAGTC 59.749 55.000 0.00 0.00 0.00 3.36
279 280 0.744771 GCCCATCCAAGTTCGAGTCC 60.745 60.000 0.00 0.00 0.00 3.85
280 281 0.107654 CCCATCCAAGTTCGAGTCCC 60.108 60.000 0.00 0.00 0.00 4.46
281 282 0.460284 CCATCCAAGTTCGAGTCCCG 60.460 60.000 0.00 0.00 40.25 5.14
282 283 0.530744 CATCCAAGTTCGAGTCCCGA 59.469 55.000 0.00 0.00 46.94 5.14
308 309 2.434884 CGCGGTGCTCATGGAGTT 60.435 61.111 0.00 0.00 31.39 3.01
309 310 2.034879 CGCGGTGCTCATGGAGTTT 61.035 57.895 0.00 0.00 31.39 2.66
310 311 0.739462 CGCGGTGCTCATGGAGTTTA 60.739 55.000 0.00 0.00 31.39 2.01
311 312 1.668419 GCGGTGCTCATGGAGTTTAT 58.332 50.000 0.00 0.00 31.39 1.40
312 313 1.599542 GCGGTGCTCATGGAGTTTATC 59.400 52.381 0.00 0.00 31.39 1.75
328 329 8.691661 GGAGTTTATCCTATAAGAAAATGCCA 57.308 34.615 0.00 0.00 45.64 4.92
329 330 9.131791 GGAGTTTATCCTATAAGAAAATGCCAA 57.868 33.333 0.00 0.00 45.64 4.52
330 331 9.952188 GAGTTTATCCTATAAGAAAATGCCAAC 57.048 33.333 0.00 0.00 0.00 3.77
331 332 8.621286 AGTTTATCCTATAAGAAAATGCCAACG 58.379 33.333 0.00 0.00 0.00 4.10
332 333 8.617809 GTTTATCCTATAAGAAAATGCCAACGA 58.382 33.333 0.00 0.00 0.00 3.85
333 334 6.867662 ATCCTATAAGAAAATGCCAACGAG 57.132 37.500 0.00 0.00 0.00 4.18
334 335 5.123227 TCCTATAAGAAAATGCCAACGAGG 58.877 41.667 0.00 0.00 41.84 4.63
335 336 4.881850 CCTATAAGAAAATGCCAACGAGGT 59.118 41.667 0.00 0.00 40.61 3.85
336 337 4.701956 ATAAGAAAATGCCAACGAGGTG 57.298 40.909 0.00 0.00 40.61 4.00
337 338 1.247567 AGAAAATGCCAACGAGGTGG 58.752 50.000 2.13 2.13 42.05 4.61
338 339 0.243636 GAAAATGCCAACGAGGTGGG 59.756 55.000 9.46 0.00 39.26 4.61
339 340 0.469144 AAAATGCCAACGAGGTGGGT 60.469 50.000 9.46 0.00 39.26 4.51
340 341 0.469144 AAATGCCAACGAGGTGGGTT 60.469 50.000 9.46 0.00 39.26 4.11
341 342 1.178534 AATGCCAACGAGGTGGGTTG 61.179 55.000 9.46 0.00 43.33 3.77
344 345 3.744559 CAACGAGGTGGGTTGGTG 58.255 61.111 0.00 0.00 40.75 4.17
345 346 1.153046 CAACGAGGTGGGTTGGTGT 60.153 57.895 0.00 0.00 40.75 4.16
346 347 1.147600 AACGAGGTGGGTTGGTGTC 59.852 57.895 0.00 0.00 0.00 3.67
347 348 1.628238 AACGAGGTGGGTTGGTGTCA 61.628 55.000 0.00 0.00 0.00 3.58
348 349 1.374947 CGAGGTGGGTTGGTGTCAT 59.625 57.895 0.00 0.00 0.00 3.06
349 350 0.250727 CGAGGTGGGTTGGTGTCATT 60.251 55.000 0.00 0.00 0.00 2.57
350 351 1.817740 CGAGGTGGGTTGGTGTCATTT 60.818 52.381 0.00 0.00 0.00 2.32
351 352 2.316108 GAGGTGGGTTGGTGTCATTTT 58.684 47.619 0.00 0.00 0.00 1.82
352 353 2.296190 GAGGTGGGTTGGTGTCATTTTC 59.704 50.000 0.00 0.00 0.00 2.29
353 354 1.000717 GGTGGGTTGGTGTCATTTTCG 60.001 52.381 0.00 0.00 0.00 3.46
354 355 1.679153 GTGGGTTGGTGTCATTTTCGT 59.321 47.619 0.00 0.00 0.00 3.85
355 356 2.879646 GTGGGTTGGTGTCATTTTCGTA 59.120 45.455 0.00 0.00 0.00 3.43
356 357 2.879646 TGGGTTGGTGTCATTTTCGTAC 59.120 45.455 0.00 0.00 0.00 3.67
357 358 3.143728 GGGTTGGTGTCATTTTCGTACT 58.856 45.455 0.00 0.00 0.00 2.73
358 359 4.202336 TGGGTTGGTGTCATTTTCGTACTA 60.202 41.667 0.00 0.00 0.00 1.82
359 360 4.152938 GGGTTGGTGTCATTTTCGTACTAC 59.847 45.833 0.00 0.00 0.00 2.73
360 361 4.992951 GGTTGGTGTCATTTTCGTACTACT 59.007 41.667 0.00 0.00 0.00 2.57
361 362 5.107220 GGTTGGTGTCATTTTCGTACTACTG 60.107 44.000 0.00 0.00 0.00 2.74
362 363 4.562082 TGGTGTCATTTTCGTACTACTGG 58.438 43.478 0.00 0.00 0.00 4.00
363 364 3.370061 GGTGTCATTTTCGTACTACTGGC 59.630 47.826 0.00 0.00 0.00 4.85
364 365 3.991773 GTGTCATTTTCGTACTACTGGCA 59.008 43.478 0.00 0.00 0.00 4.92
365 366 4.091509 GTGTCATTTTCGTACTACTGGCAG 59.908 45.833 14.16 14.16 0.00 4.85
366 367 4.243270 GTCATTTTCGTACTACTGGCAGT 58.757 43.478 25.34 25.34 0.00 4.40
367 368 4.091509 GTCATTTTCGTACTACTGGCAGTG 59.908 45.833 29.65 20.38 0.00 3.66
368 369 2.736144 TTTCGTACTACTGGCAGTGG 57.264 50.000 29.65 28.24 32.47 4.00
369 370 0.245539 TTCGTACTACTGGCAGTGGC 59.754 55.000 29.65 13.77 40.13 5.01
370 371 0.896479 TCGTACTACTGGCAGTGGCA 60.896 55.000 29.65 19.44 43.71 4.92
378 379 4.962836 GGCAGTGGCAGTGGCAGT 62.963 66.667 35.60 20.93 42.93 4.40
381 382 3.170672 AGTGGCAGTGGCAGTGGA 61.171 61.111 24.96 0.00 40.26 4.02
382 383 2.980233 GTGGCAGTGGCAGTGGAC 60.980 66.667 21.25 3.86 43.71 4.02
383 384 4.624364 TGGCAGTGGCAGTGGACG 62.624 66.667 22.98 0.00 43.71 4.79
384 385 4.314440 GGCAGTGGCAGTGGACGA 62.314 66.667 22.98 0.00 43.71 4.20
385 386 3.044305 GCAGTGGCAGTGGACGAC 61.044 66.667 22.98 2.91 40.72 4.34
386 387 2.357517 CAGTGGCAGTGGACGACC 60.358 66.667 14.66 0.00 0.00 4.79
387 388 2.524394 AGTGGCAGTGGACGACCT 60.524 61.111 5.33 0.00 37.04 3.85
388 389 2.357517 GTGGCAGTGGACGACCTG 60.358 66.667 5.33 0.00 37.04 4.00
389 390 3.625897 TGGCAGTGGACGACCTGG 61.626 66.667 5.33 0.00 37.04 4.45
390 391 3.311110 GGCAGTGGACGACCTGGA 61.311 66.667 0.00 0.00 37.04 3.86
391 392 2.741092 GCAGTGGACGACCTGGAA 59.259 61.111 0.00 0.00 37.04 3.53
392 393 1.374758 GCAGTGGACGACCTGGAAG 60.375 63.158 0.00 0.00 37.04 3.46
393 394 2.050269 CAGTGGACGACCTGGAAGT 58.950 57.895 0.00 0.00 37.04 3.01
394 395 1.254026 CAGTGGACGACCTGGAAGTA 58.746 55.000 0.00 0.00 37.04 2.24
395 396 1.616865 CAGTGGACGACCTGGAAGTAA 59.383 52.381 0.00 0.00 37.04 2.24
396 397 2.233922 CAGTGGACGACCTGGAAGTAAT 59.766 50.000 0.00 0.00 37.04 1.89
397 398 2.233922 AGTGGACGACCTGGAAGTAATG 59.766 50.000 0.00 0.00 37.04 1.90
398 399 1.553248 TGGACGACCTGGAAGTAATGG 59.447 52.381 0.00 0.00 37.04 3.16
399 400 1.553704 GGACGACCTGGAAGTAATGGT 59.446 52.381 0.00 0.00 35.23 3.55
400 401 2.618053 GACGACCTGGAAGTAATGGTG 58.382 52.381 0.00 0.00 32.30 4.17
401 402 1.338769 ACGACCTGGAAGTAATGGTGC 60.339 52.381 0.00 0.00 32.30 5.01
402 403 1.338674 CGACCTGGAAGTAATGGTGCA 60.339 52.381 0.00 0.00 32.30 4.57
403 404 2.084546 GACCTGGAAGTAATGGTGCAC 58.915 52.381 8.80 8.80 32.30 4.57
404 405 1.086696 CCTGGAAGTAATGGTGCACG 58.913 55.000 11.45 0.00 0.00 5.34
405 406 1.610624 CCTGGAAGTAATGGTGCACGT 60.611 52.381 11.45 0.00 0.00 4.49
406 407 1.732259 CTGGAAGTAATGGTGCACGTC 59.268 52.381 11.45 0.00 0.00 4.34
407 408 0.719465 GGAAGTAATGGTGCACGTCG 59.281 55.000 11.45 0.00 0.00 5.12
408 409 0.094730 GAAGTAATGGTGCACGTCGC 59.905 55.000 11.45 0.00 42.89 5.19
409 410 1.296056 AAGTAATGGTGCACGTCGCC 61.296 55.000 11.45 9.73 45.62 5.54
415 416 3.641986 GTGCACGTCGCCGGAAAA 61.642 61.111 5.05 0.00 41.33 2.29
416 417 2.895865 TGCACGTCGCCGGAAAAA 60.896 55.556 5.05 0.00 41.33 1.94
433 434 3.436700 AAAAAGGTGGTCGAAGCTTTG 57.563 42.857 13.43 7.44 44.78 2.77
434 435 0.668535 AAAGGTGGTCGAAGCTTTGC 59.331 50.000 12.25 4.37 44.08 3.68
435 436 1.172812 AAGGTGGTCGAAGCTTTGCC 61.173 55.000 9.00 13.34 34.28 4.52
436 437 1.600916 GGTGGTCGAAGCTTTGCCT 60.601 57.895 20.87 0.00 0.00 4.75
437 438 1.576421 GTGGTCGAAGCTTTGCCTG 59.424 57.895 20.87 3.84 0.00 4.85
438 439 1.148273 TGGTCGAAGCTTTGCCTGT 59.852 52.632 20.87 0.00 0.00 4.00
439 440 0.884704 TGGTCGAAGCTTTGCCTGTC 60.885 55.000 20.87 0.00 0.00 3.51
440 441 0.884704 GGTCGAAGCTTTGCCTGTCA 60.885 55.000 9.00 0.00 0.00 3.58
441 442 1.160137 GTCGAAGCTTTGCCTGTCAT 58.840 50.000 9.00 0.00 0.00 3.06
442 443 1.135859 GTCGAAGCTTTGCCTGTCATG 60.136 52.381 9.00 0.00 0.00 3.07
443 444 0.169672 CGAAGCTTTGCCTGTCATGG 59.830 55.000 0.00 0.00 0.00 3.66
444 445 0.529378 GAAGCTTTGCCTGTCATGGG 59.471 55.000 0.00 0.00 0.00 4.00
445 446 0.901580 AAGCTTTGCCTGTCATGGGG 60.902 55.000 0.00 0.00 0.00 4.96
446 447 1.304381 GCTTTGCCTGTCATGGGGA 60.304 57.895 0.00 0.00 0.00 4.81
447 448 0.685458 GCTTTGCCTGTCATGGGGAT 60.685 55.000 0.00 0.00 0.00 3.85
448 449 1.396653 CTTTGCCTGTCATGGGGATC 58.603 55.000 0.00 0.00 0.00 3.36
449 450 0.703488 TTTGCCTGTCATGGGGATCA 59.297 50.000 0.00 0.00 0.00 2.92
450 451 0.703488 TTGCCTGTCATGGGGATCAA 59.297 50.000 0.00 0.00 0.00 2.57
451 452 0.703488 TGCCTGTCATGGGGATCAAA 59.297 50.000 0.00 0.00 0.00 2.69
452 453 1.076841 TGCCTGTCATGGGGATCAAAA 59.923 47.619 0.00 0.00 0.00 2.44
453 454 2.292389 TGCCTGTCATGGGGATCAAAAT 60.292 45.455 0.00 0.00 0.00 1.82
454 455 2.101917 GCCTGTCATGGGGATCAAAATG 59.898 50.000 0.00 0.00 0.00 2.32
455 456 2.696707 CCTGTCATGGGGATCAAAATGG 59.303 50.000 0.00 0.00 0.00 3.16
456 457 3.368248 CTGTCATGGGGATCAAAATGGT 58.632 45.455 0.00 0.00 0.00 3.55
457 458 4.535781 CTGTCATGGGGATCAAAATGGTA 58.464 43.478 0.00 0.00 0.00 3.25
458 459 4.940483 TGTCATGGGGATCAAAATGGTAA 58.060 39.130 0.00 0.00 0.00 2.85
459 460 4.709397 TGTCATGGGGATCAAAATGGTAAC 59.291 41.667 0.00 0.00 0.00 2.50
475 476 5.605564 TGGTAACAGAAATGAATGTCGTG 57.394 39.130 0.00 0.00 46.17 4.35
476 477 4.083537 TGGTAACAGAAATGAATGTCGTGC 60.084 41.667 0.00 0.00 46.17 5.34
477 478 4.083537 GGTAACAGAAATGAATGTCGTGCA 60.084 41.667 0.00 0.00 0.00 4.57
478 479 4.771590 AACAGAAATGAATGTCGTGCAT 57.228 36.364 0.00 0.00 40.03 3.96
479 480 4.087510 ACAGAAATGAATGTCGTGCATG 57.912 40.909 0.00 0.00 37.96 4.06
480 481 3.752747 ACAGAAATGAATGTCGTGCATGA 59.247 39.130 3.97 3.97 37.96 3.07
481 482 4.216042 ACAGAAATGAATGTCGTGCATGAA 59.784 37.500 10.93 1.70 37.96 2.57
482 483 5.106038 ACAGAAATGAATGTCGTGCATGAAT 60.106 36.000 10.93 4.11 37.96 2.57
483 484 5.454554 CAGAAATGAATGTCGTGCATGAATC 59.545 40.000 10.93 10.06 37.96 2.52
484 485 5.356190 AGAAATGAATGTCGTGCATGAATCT 59.644 36.000 10.93 0.00 37.96 2.40
485 486 4.808077 ATGAATGTCGTGCATGAATCTC 57.192 40.909 10.93 7.71 37.96 2.75
486 487 3.598299 TGAATGTCGTGCATGAATCTCA 58.402 40.909 10.93 10.21 37.96 3.27
487 488 3.371898 TGAATGTCGTGCATGAATCTCAC 59.628 43.478 10.93 0.00 37.96 3.51
489 490 4.961622 CGTGCATGAATCTCACGC 57.038 55.556 0.00 0.00 45.22 5.34
490 491 0.389687 TCGTGCATGAATCTCACGCA 60.390 50.000 6.04 5.45 43.74 5.24
493 494 2.320745 TGCATGAATCTCACGCATCT 57.679 45.000 0.00 0.00 40.91 2.90
494 495 2.207590 TGCATGAATCTCACGCATCTC 58.792 47.619 0.00 0.00 40.91 2.75
495 496 1.191868 GCATGAATCTCACGCATCTCG 59.808 52.381 0.00 0.00 35.40 4.04
504 505 2.391821 CGCATCTCGTGTTCACGC 59.608 61.111 18.63 5.32 0.00 5.34
512 513 2.897855 CGTGTTCACGCGCAATAAG 58.102 52.632 5.73 0.00 43.06 1.73
513 514 0.436913 CGTGTTCACGCGCAATAAGA 59.563 50.000 5.73 0.00 43.06 2.10
514 515 1.782023 CGTGTTCACGCGCAATAAGAC 60.782 52.381 5.73 5.53 43.06 3.01
515 516 0.436913 TGTTCACGCGCAATAAGACG 59.563 50.000 5.73 0.00 0.00 4.18
516 517 0.247145 GTTCACGCGCAATAAGACGG 60.247 55.000 5.73 0.00 0.00 4.79
517 518 0.388778 TTCACGCGCAATAAGACGGA 60.389 50.000 5.73 0.00 0.00 4.69
518 519 0.800683 TCACGCGCAATAAGACGGAG 60.801 55.000 5.73 0.00 0.00 4.63
519 520 0.800683 CACGCGCAATAAGACGGAGA 60.801 55.000 5.73 0.00 0.00 3.71
520 521 0.102481 ACGCGCAATAAGACGGAGAT 59.898 50.000 5.73 0.00 0.00 2.75
521 522 1.335810 ACGCGCAATAAGACGGAGATA 59.664 47.619 5.73 0.00 0.00 1.98
522 523 2.223641 ACGCGCAATAAGACGGAGATAA 60.224 45.455 5.73 0.00 0.00 1.75
523 524 2.792674 CGCGCAATAAGACGGAGATAAA 59.207 45.455 8.75 0.00 0.00 1.40
524 525 3.244345 CGCGCAATAAGACGGAGATAAAA 59.756 43.478 8.75 0.00 0.00 1.52
525 526 4.515432 GCGCAATAAGACGGAGATAAAAC 58.485 43.478 0.30 0.00 0.00 2.43
526 527 4.552184 GCGCAATAAGACGGAGATAAAACC 60.552 45.833 0.30 0.00 0.00 3.27
531 532 4.136250 CGGAGATAAAACCGGGGC 57.864 61.111 6.32 0.00 44.59 5.80
532 533 1.525306 CGGAGATAAAACCGGGGCC 60.525 63.158 6.32 0.00 44.59 5.80
533 534 1.152819 GGAGATAAAACCGGGGCCC 60.153 63.158 15.76 15.76 0.00 5.80
535 536 2.261430 GAGATAAAACCGGGGCCCGT 62.261 60.000 40.30 26.61 46.80 5.28
536 537 1.378911 GATAAAACCGGGGCCCGTT 60.379 57.895 40.30 30.23 46.80 4.44
537 538 1.378882 GATAAAACCGGGGCCCGTTC 61.379 60.000 40.30 22.80 46.80 3.95
538 539 3.898167 TAAAACCGGGGCCCGTTCG 62.898 63.158 40.30 28.46 46.80 3.95
542 543 4.789123 CCGGGGCCCGTTCGATTT 62.789 66.667 40.30 0.00 46.80 2.17
543 544 3.199891 CGGGGCCCGTTCGATTTC 61.200 66.667 36.52 0.00 42.73 2.17
544 545 2.045731 GGGGCCCGTTCGATTTCA 60.046 61.111 17.79 0.00 0.00 2.69
545 546 2.112815 GGGGCCCGTTCGATTTCAG 61.113 63.158 17.79 0.00 0.00 3.02
546 547 1.078708 GGGCCCGTTCGATTTCAGA 60.079 57.895 5.69 0.00 0.00 3.27
547 548 1.366854 GGGCCCGTTCGATTTCAGAC 61.367 60.000 5.69 0.00 0.00 3.51
548 549 1.366854 GGCCCGTTCGATTTCAGACC 61.367 60.000 0.00 0.00 0.00 3.85
549 550 1.366854 GCCCGTTCGATTTCAGACCC 61.367 60.000 0.00 0.00 0.00 4.46
550 551 1.082117 CCCGTTCGATTTCAGACCCG 61.082 60.000 0.00 0.00 0.00 5.28
551 552 0.108992 CCGTTCGATTTCAGACCCGA 60.109 55.000 0.00 0.00 0.00 5.14
552 553 1.670674 CCGTTCGATTTCAGACCCGAA 60.671 52.381 0.00 0.00 38.49 4.30
553 554 2.268298 CGTTCGATTTCAGACCCGAAT 58.732 47.619 0.00 0.00 41.96 3.34
554 555 3.441163 CGTTCGATTTCAGACCCGAATA 58.559 45.455 0.00 0.00 41.96 1.75
555 556 3.486108 CGTTCGATTTCAGACCCGAATAG 59.514 47.826 0.00 0.00 41.96 1.73
556 557 3.728076 TCGATTTCAGACCCGAATAGG 57.272 47.619 0.00 0.00 40.63 2.57
557 558 2.135933 CGATTTCAGACCCGAATAGGC 58.864 52.381 0.00 0.00 39.21 3.93
558 559 2.483013 CGATTTCAGACCCGAATAGGCA 60.483 50.000 0.00 0.00 39.21 4.75
559 560 3.541632 GATTTCAGACCCGAATAGGCAA 58.458 45.455 0.00 0.00 39.21 4.52
560 561 2.691409 TTCAGACCCGAATAGGCAAG 57.309 50.000 0.00 0.00 39.21 4.01
561 562 0.178068 TCAGACCCGAATAGGCAAGC 59.822 55.000 0.00 0.00 39.21 4.01
562 563 0.815615 CAGACCCGAATAGGCAAGCC 60.816 60.000 2.02 2.02 39.21 4.35
563 564 1.223487 GACCCGAATAGGCAAGCCA 59.777 57.895 14.40 0.00 39.21 4.75
564 565 1.077716 ACCCGAATAGGCAAGCCAC 60.078 57.895 14.40 1.13 39.21 5.01
565 566 2.180204 CCCGAATAGGCAAGCCACG 61.180 63.158 14.40 12.30 39.21 4.94
566 567 2.180204 CCGAATAGGCAAGCCACGG 61.180 63.158 14.40 16.85 38.92 4.94
567 568 2.823829 CGAATAGGCAAGCCACGGC 61.824 63.158 14.40 0.00 42.33 5.68
573 574 3.211963 GCAAGCCACGGCCATAGG 61.212 66.667 2.24 1.40 43.17 2.57
583 584 3.938112 GCCATAGGCGTCGTCATC 58.062 61.111 0.00 0.00 39.62 2.92
584 585 1.364171 GCCATAGGCGTCGTCATCT 59.636 57.895 0.00 0.00 39.62 2.90
585 586 0.596577 GCCATAGGCGTCGTCATCTA 59.403 55.000 0.00 0.00 39.62 1.98
586 587 1.401670 GCCATAGGCGTCGTCATCTAG 60.402 57.143 0.00 0.00 39.62 2.43
587 588 1.880675 CCATAGGCGTCGTCATCTAGT 59.119 52.381 0.00 0.00 0.00 2.57
588 589 3.072211 CCATAGGCGTCGTCATCTAGTA 58.928 50.000 0.00 0.00 0.00 1.82
589 590 3.125487 CCATAGGCGTCGTCATCTAGTAG 59.875 52.174 0.00 0.00 0.00 2.57
590 591 1.595466 AGGCGTCGTCATCTAGTAGG 58.405 55.000 0.00 0.00 0.00 3.18
591 592 1.134159 AGGCGTCGTCATCTAGTAGGT 60.134 52.381 0.00 0.00 0.00 3.08
592 593 2.103771 AGGCGTCGTCATCTAGTAGGTA 59.896 50.000 0.00 0.00 0.00 3.08
593 594 2.479656 GGCGTCGTCATCTAGTAGGTAG 59.520 54.545 0.00 0.00 0.00 3.18
594 595 2.096318 GCGTCGTCATCTAGTAGGTAGC 60.096 54.545 0.00 0.00 0.00 3.58
595 596 3.129109 CGTCGTCATCTAGTAGGTAGCA 58.871 50.000 0.00 0.00 0.00 3.49
596 597 3.747010 CGTCGTCATCTAGTAGGTAGCAT 59.253 47.826 0.00 0.00 0.00 3.79
597 598 4.213694 CGTCGTCATCTAGTAGGTAGCATT 59.786 45.833 0.00 0.00 0.00 3.56
598 599 5.453648 GTCGTCATCTAGTAGGTAGCATTG 58.546 45.833 0.00 0.00 0.00 2.82
599 600 5.008811 GTCGTCATCTAGTAGGTAGCATTGT 59.991 44.000 0.00 0.00 0.00 2.71
600 601 5.593095 TCGTCATCTAGTAGGTAGCATTGTT 59.407 40.000 0.00 0.00 0.00 2.83
601 602 6.096423 TCGTCATCTAGTAGGTAGCATTGTTT 59.904 38.462 0.00 0.00 0.00 2.83
602 603 6.757010 CGTCATCTAGTAGGTAGCATTGTTTT 59.243 38.462 0.00 0.00 0.00 2.43
603 604 7.919091 CGTCATCTAGTAGGTAGCATTGTTTTA 59.081 37.037 0.00 0.00 0.00 1.52
604 605 9.595823 GTCATCTAGTAGGTAGCATTGTTTTAA 57.404 33.333 0.00 0.00 0.00 1.52
633 634 3.691342 TCGGTGGCAACCTCGGAG 61.691 66.667 9.09 0.00 45.17 4.63
634 635 4.003788 CGGTGGCAACCTCGGAGT 62.004 66.667 9.09 0.00 45.17 3.85
637 643 0.672711 GGTGGCAACCTCGGAGTAAC 60.673 60.000 1.77 0.00 43.84 2.50
640 646 2.098831 GCAACCTCGGAGTAACGGC 61.099 63.158 4.02 0.00 0.00 5.68
659 665 2.554272 CACGTCGCCGGGAAAAAG 59.446 61.111 2.18 0.00 41.01 2.27
661 667 2.667199 CGTCGCCGGGAAAAAGGT 60.667 61.111 2.18 0.00 0.00 3.50
662 668 2.951458 GTCGCCGGGAAAAAGGTG 59.049 61.111 2.18 0.00 39.26 4.00
663 669 1.895231 GTCGCCGGGAAAAAGGTGT 60.895 57.895 2.18 0.00 38.99 4.16
665 671 2.951458 GCCGGGAAAAAGGTGTCG 59.049 61.111 2.18 0.00 0.00 4.35
666 672 1.895231 GCCGGGAAAAAGGTGTCGT 60.895 57.895 2.18 0.00 0.00 4.34
667 673 1.848932 GCCGGGAAAAAGGTGTCGTC 61.849 60.000 2.18 0.00 0.00 4.20
668 674 1.232621 CCGGGAAAAAGGTGTCGTCC 61.233 60.000 0.00 0.00 0.00 4.79
671 677 1.348696 GGGAAAAAGGTGTCGTCCCTA 59.651 52.381 0.00 0.00 44.01 3.53
672 678 2.420642 GGAAAAAGGTGTCGTCCCTAC 58.579 52.381 0.00 0.00 0.00 3.18
674 680 1.725803 AAAAGGTGTCGTCCCTACCT 58.274 50.000 0.00 0.00 46.38 3.08
675 681 3.470393 AAGGTGTCGTCCCTACCTT 57.530 52.632 0.00 0.00 46.93 3.50
676 682 2.667348 AGGTGTCGTCCCTACCTTG 58.333 57.895 0.00 0.00 41.93 3.61
677 683 0.903454 AGGTGTCGTCCCTACCTTGG 60.903 60.000 0.00 0.00 41.93 3.61
717 728 1.470098 CGGCAAGATGGACAAGGAAAG 59.530 52.381 0.00 0.00 0.00 2.62
738 749 2.915869 GCCCCGATTTCCCAGCTA 59.084 61.111 0.00 0.00 0.00 3.32
745 756 2.092914 CCGATTTCCCAGCTACTTCCTT 60.093 50.000 0.00 0.00 0.00 3.36
747 758 2.762535 TTTCCCAGCTACTTCCTTCG 57.237 50.000 0.00 0.00 0.00 3.79
774 785 4.772687 GGGTCGGCCGGTTCCTTC 62.773 72.222 27.83 9.93 34.97 3.46
775 786 4.011517 GGTCGGCCGGTTCCTTCA 62.012 66.667 27.83 0.00 0.00 3.02
776 787 2.031465 GTCGGCCGGTTCCTTCAA 59.969 61.111 27.83 0.00 0.00 2.69
777 788 2.031465 TCGGCCGGTTCCTTCAAC 59.969 61.111 27.83 0.00 0.00 3.18
778 789 3.419759 CGGCCGGTTCCTTCAACG 61.420 66.667 20.10 0.00 35.59 4.10
819 831 1.584495 GCCCCATTCCGTTTCACAC 59.416 57.895 0.00 0.00 0.00 3.82
820 832 1.175983 GCCCCATTCCGTTTCACACA 61.176 55.000 0.00 0.00 0.00 3.72
822 834 1.313772 CCCATTCCGTTTCACACACA 58.686 50.000 0.00 0.00 0.00 3.72
824 836 1.001815 CCATTCCGTTTCACACACACC 60.002 52.381 0.00 0.00 0.00 4.16
825 837 1.946768 CATTCCGTTTCACACACACCT 59.053 47.619 0.00 0.00 0.00 4.00
826 838 1.658994 TTCCGTTTCACACACACCTC 58.341 50.000 0.00 0.00 0.00 3.85
828 840 1.164041 CCGTTTCACACACACCTCCC 61.164 60.000 0.00 0.00 0.00 4.30
829 841 0.462937 CGTTTCACACACACCTCCCA 60.463 55.000 0.00 0.00 0.00 4.37
860 873 4.953010 TGACCCGTCACGACCCGA 62.953 66.667 0.00 0.00 34.14 5.14
877 890 1.250328 CGACCCCCGCTACATATACA 58.750 55.000 0.00 0.00 0.00 2.29
878 891 1.201647 CGACCCCCGCTACATATACAG 59.798 57.143 0.00 0.00 0.00 2.74
914 928 4.275508 CACACCAGCACCAGCCCT 62.276 66.667 0.00 0.00 43.56 5.19
915 929 3.958860 ACACCAGCACCAGCCCTC 61.959 66.667 0.00 0.00 43.56 4.30
927 948 1.474077 CCAGCCCTCCTTTTCAAATCG 59.526 52.381 0.00 0.00 0.00 3.34
938 959 5.748152 TCCTTTTCAAATCGCTTTCAAACAG 59.252 36.000 0.00 0.00 0.00 3.16
939 960 5.050837 CCTTTTCAAATCGCTTTCAAACAGG 60.051 40.000 0.00 0.00 0.00 4.00
943 964 4.097135 TCAAATCGCTTTCAAACAGGAACA 59.903 37.500 0.00 0.00 0.00 3.18
958 979 3.665675 AACACATCGCCGCCTCCTC 62.666 63.158 0.00 0.00 0.00 3.71
959 980 4.899239 CACATCGCCGCCTCCTCC 62.899 72.222 0.00 0.00 0.00 4.30
961 982 4.292178 CATCGCCGCCTCCTCCTC 62.292 72.222 0.00 0.00 0.00 3.71
966 987 4.806339 CCGCCTCCTCCTCCCCTT 62.806 72.222 0.00 0.00 0.00 3.95
967 988 3.157949 CGCCTCCTCCTCCCCTTC 61.158 72.222 0.00 0.00 0.00 3.46
968 989 2.770475 GCCTCCTCCTCCCCTTCC 60.770 72.222 0.00 0.00 0.00 3.46
969 990 3.124088 CCTCCTCCTCCCCTTCCT 58.876 66.667 0.00 0.00 0.00 3.36
970 991 1.074850 CCTCCTCCTCCCCTTCCTC 60.075 68.421 0.00 0.00 0.00 3.71
971 992 1.074850 CTCCTCCTCCCCTTCCTCC 60.075 68.421 0.00 0.00 0.00 4.30
972 993 2.444895 CCTCCTCCCCTTCCTCCG 60.445 72.222 0.00 0.00 0.00 4.63
973 994 3.157949 CTCCTCCCCTTCCTCCGC 61.158 72.222 0.00 0.00 0.00 5.54
974 995 3.684628 TCCTCCCCTTCCTCCGCT 61.685 66.667 0.00 0.00 0.00 5.52
975 996 3.157949 CCTCCCCTTCCTCCGCTC 61.158 72.222 0.00 0.00 0.00 5.03
978 999 4.806339 CCCCTTCCTCCGCTCCCT 62.806 72.222 0.00 0.00 0.00 4.20
993 1014 2.158810 CCCTCCCCCATCCATCCAG 61.159 68.421 0.00 0.00 0.00 3.86
995 1016 1.713005 CCTCCCCCATCCATCCAGTG 61.713 65.000 0.00 0.00 0.00 3.66
1029 1050 1.014564 CCTCGCCCGAGTTCTTCAAC 61.015 60.000 15.59 0.00 40.44 3.18
1066 1087 4.827087 CGCGCATGCACCTCCTCT 62.827 66.667 19.57 0.00 42.97 3.69
1123 1144 0.527600 CGAATACTACCGCTGCTGCA 60.528 55.000 16.29 0.88 39.64 4.41
1323 1344 1.010125 CCACGACCGCAACAACAAG 60.010 57.895 0.00 0.00 0.00 3.16
1324 1345 1.654137 CACGACCGCAACAACAAGC 60.654 57.895 0.00 0.00 0.00 4.01
1418 1442 2.797491 CGCCAGCTTAAATTAAGTGCC 58.203 47.619 13.56 1.73 38.07 5.01
1421 1445 3.774066 CCAGCTTAAATTAAGTGCCTGC 58.226 45.455 13.56 0.20 38.07 4.85
1482 1715 4.095932 CACTTGTGTGGATGGATGATTGAG 59.904 45.833 0.00 0.00 40.33 3.02
1483 1716 4.263639 ACTTGTGTGGATGGATGATTGAGT 60.264 41.667 0.00 0.00 0.00 3.41
1489 1722 6.204301 GTGTGGATGGATGATTGAGTTATCAG 59.796 42.308 0.00 0.00 37.91 2.90
1575 1810 9.035890 TCCTCTGTAATCATCCGTCATAATAAT 57.964 33.333 0.00 0.00 0.00 1.28
1615 1863 4.706476 TCCATCTTTGATTCCTTGCGAATT 59.294 37.500 0.00 0.00 41.47 2.17
1617 1865 5.517770 CCATCTTTGATTCCTTGCGAATTTC 59.482 40.000 0.00 0.00 41.47 2.17
1621 1869 4.439305 TGATTCCTTGCGAATTTCCAAG 57.561 40.909 15.25 15.25 41.47 3.61
1622 1870 3.826157 TGATTCCTTGCGAATTTCCAAGT 59.174 39.130 18.29 7.41 41.47 3.16
1623 1871 3.641437 TTCCTTGCGAATTTCCAAGTG 57.359 42.857 18.29 13.06 37.36 3.16
1624 1872 2.582052 TCCTTGCGAATTTCCAAGTGT 58.418 42.857 18.29 0.00 37.36 3.55
1626 1874 3.052036 CCTTGCGAATTTCCAAGTGTTG 58.948 45.455 18.29 6.87 37.36 3.33
1627 1875 3.243367 CCTTGCGAATTTCCAAGTGTTGA 60.243 43.478 18.29 0.00 37.36 3.18
1628 1876 4.358851 CTTGCGAATTTCCAAGTGTTGAA 58.641 39.130 14.50 0.00 35.03 2.69
1629 1877 3.963665 TGCGAATTTCCAAGTGTTGAAG 58.036 40.909 0.00 0.00 0.00 3.02
1630 1878 3.380004 TGCGAATTTCCAAGTGTTGAAGT 59.620 39.130 0.00 0.00 0.00 3.01
1632 1880 4.803613 GCGAATTTCCAAGTGTTGAAGTTT 59.196 37.500 0.00 0.00 0.00 2.66
1633 1881 5.974751 GCGAATTTCCAAGTGTTGAAGTTTA 59.025 36.000 0.00 0.00 0.00 2.01
1634 1882 6.474102 GCGAATTTCCAAGTGTTGAAGTTTAA 59.526 34.615 0.00 0.00 0.00 1.52
1635 1883 7.514591 GCGAATTTCCAAGTGTTGAAGTTTAAC 60.515 37.037 3.65 3.65 0.00 2.01
1636 1884 7.486551 CGAATTTCCAAGTGTTGAAGTTTAACA 59.513 33.333 9.00 9.00 35.81 2.41
1646 1894 7.867305 TGTTGAAGTTTAACACCACTGATTA 57.133 32.000 9.00 0.00 33.43 1.75
1648 1896 6.870971 TGAAGTTTAACACCACTGATTACC 57.129 37.500 0.00 0.00 0.00 2.85
1652 1900 2.178912 AACACCACTGATTACCACGG 57.821 50.000 0.00 0.00 0.00 4.94
1653 1901 0.323629 ACACCACTGATTACCACGGG 59.676 55.000 0.00 0.00 0.00 5.28
1666 1914 0.609131 CCACGGGTGGCAGAGAAATT 60.609 55.000 4.68 0.00 44.73 1.82
1698 1946 3.077359 CAGGGGTGAGAAATTGACTGAC 58.923 50.000 0.00 0.00 0.00 3.51
1699 1947 2.711009 AGGGGTGAGAAATTGACTGACA 59.289 45.455 5.31 0.00 0.00 3.58
1700 1948 3.077359 GGGGTGAGAAATTGACTGACAG 58.923 50.000 0.00 0.00 0.00 3.51
1701 1949 3.077359 GGGTGAGAAATTGACTGACAGG 58.923 50.000 7.51 0.00 0.00 4.00
1702 1950 2.485814 GGTGAGAAATTGACTGACAGGC 59.514 50.000 7.51 3.88 0.00 4.85
1703 1951 3.141398 GTGAGAAATTGACTGACAGGCA 58.859 45.455 6.99 6.99 0.00 4.75
1704 1952 3.058639 GTGAGAAATTGACTGACAGGCAC 60.059 47.826 11.56 0.00 29.12 5.01
1718 1979 2.583520 GCACAGAGAGGGAGCCAG 59.416 66.667 0.00 0.00 0.00 4.85
1720 1981 1.988956 CACAGAGAGGGAGCCAGCT 60.989 63.158 0.00 0.00 0.00 4.24
1721 1982 0.685785 CACAGAGAGGGAGCCAGCTA 60.686 60.000 0.00 0.00 0.00 3.32
1722 1983 0.041833 ACAGAGAGGGAGCCAGCTAA 59.958 55.000 0.00 0.00 0.00 3.09
1723 1984 0.463620 CAGAGAGGGAGCCAGCTAAC 59.536 60.000 0.00 0.00 0.00 2.34
1724 1985 1.040339 AGAGAGGGAGCCAGCTAACG 61.040 60.000 0.00 0.00 0.00 3.18
1725 1986 2.022240 GAGAGGGAGCCAGCTAACGG 62.022 65.000 0.00 0.00 0.00 4.44
1726 1987 2.284699 AGGGAGCCAGCTAACGGT 60.285 61.111 0.00 0.00 0.00 4.83
1727 1988 2.125106 GGGAGCCAGCTAACGGTG 60.125 66.667 0.00 0.00 38.35 4.94
1777 2134 6.150474 GGTAAAATCTTTTGAGATGAACGGGA 59.850 38.462 0.00 0.00 0.00 5.14
1808 2167 8.579850 AAGCAGATTTGGTGTTTTCATCTATA 57.420 30.769 0.00 0.00 34.72 1.31
1809 2168 8.579850 AGCAGATTTGGTGTTTTCATCTATAA 57.420 30.769 0.00 0.00 32.86 0.98
1810 2169 9.193806 AGCAGATTTGGTGTTTTCATCTATAAT 57.806 29.630 0.00 0.00 32.86 1.28
1869 2256 3.059097 AGGGGATGCAGTGGATAAGATT 58.941 45.455 0.00 0.00 0.00 2.40
1936 2323 5.460646 ACAAATCGTCATCCACACAAATTC 58.539 37.500 0.00 0.00 0.00 2.17
2008 2396 8.929827 TGATTGATTTTGCAGTAATAACCATG 57.070 30.769 0.00 0.00 0.00 3.66
2032 2424 4.276678 CCATGTATGTGCCCAGTGATTTAG 59.723 45.833 0.00 0.00 0.00 1.85
2128 2545 0.383949 GGCTTTGACTTCAACGGCAA 59.616 50.000 14.72 0.00 45.60 4.52
2148 2565 1.816863 AAGACACCGACGCTGACCAT 61.817 55.000 0.00 0.00 0.00 3.55
2149 2566 0.963856 AGACACCGACGCTGACCATA 60.964 55.000 0.00 0.00 0.00 2.74
2150 2567 0.525668 GACACCGACGCTGACCATAG 60.526 60.000 0.00 0.00 0.00 2.23
2151 2568 0.963856 ACACCGACGCTGACCATAGA 60.964 55.000 0.00 0.00 0.00 1.98
2152 2569 0.385751 CACCGACGCTGACCATAGAT 59.614 55.000 0.00 0.00 0.00 1.98
2158 2575 1.889829 ACGCTGACCATAGATAGAGCC 59.110 52.381 0.00 0.00 0.00 4.70
2224 2647 0.042731 TCCCCCTACCTCTGTTCTGG 59.957 60.000 0.00 0.00 0.00 3.86
2237 2660 2.174210 CTGTTCTGGGGATGACCATGAT 59.826 50.000 0.00 0.00 42.91 2.45
2241 2664 2.851821 TCTGGGGATGACCATGATGAAA 59.148 45.455 0.00 0.00 42.91 2.69
2244 2667 3.269118 TGGGGATGACCATGATGAAAAGA 59.731 43.478 0.00 0.00 42.91 2.52
2245 2668 3.887716 GGGGATGACCATGATGAAAAGAG 59.112 47.826 0.00 0.00 42.91 2.85
2246 2669 4.530875 GGGATGACCATGATGAAAAGAGT 58.469 43.478 0.00 0.00 39.85 3.24
2248 2671 4.946157 GGATGACCATGATGAAAAGAGTGT 59.054 41.667 0.00 0.00 35.97 3.55
2249 2672 6.115446 GGATGACCATGATGAAAAGAGTGTA 58.885 40.000 0.00 0.00 35.97 2.90
2251 2674 5.863965 TGACCATGATGAAAAGAGTGTACA 58.136 37.500 0.00 0.00 0.00 2.90
2252 2675 5.934043 TGACCATGATGAAAAGAGTGTACAG 59.066 40.000 0.00 0.00 0.00 2.74
2254 2677 5.702670 ACCATGATGAAAAGAGTGTACAGTG 59.297 40.000 8.23 0.00 0.00 3.66
2255 2678 5.702670 CCATGATGAAAAGAGTGTACAGTGT 59.297 40.000 8.23 0.06 0.00 3.55
2258 2681 7.050970 TGATGAAAAGAGTGTACAGTGTAGT 57.949 36.000 8.23 0.00 0.00 2.73
2259 2682 8.173542 TGATGAAAAGAGTGTACAGTGTAGTA 57.826 34.615 8.23 0.00 0.00 1.82
2260 2683 8.080417 TGATGAAAAGAGTGTACAGTGTAGTAC 58.920 37.037 8.23 6.39 43.58 2.73
2261 2684 6.742109 TGAAAAGAGTGTACAGTGTAGTACC 58.258 40.000 8.23 1.64 42.84 3.34
2293 2746 6.323225 GGTTCAGAAGATGGATGAAATGGAAT 59.677 38.462 0.00 0.00 34.91 3.01
2297 2750 6.322969 CAGAAGATGGATGAAATGGAATGGAA 59.677 38.462 0.00 0.00 0.00 3.53
2326 2779 7.880160 CCATTTAGGTCAGATCCAAACATAA 57.120 36.000 0.00 0.00 0.00 1.90
2334 2787 8.274322 AGGTCAGATCCAAACATAACATATGAA 58.726 33.333 10.38 0.00 0.00 2.57
2335 2788 9.071276 GGTCAGATCCAAACATAACATATGAAT 57.929 33.333 10.38 0.00 0.00 2.57
2352 2805 9.602568 ACATATGAATAGAATCATCTCATCAGC 57.397 33.333 10.38 0.00 40.44 4.26
2353 2806 9.825109 CATATGAATAGAATCATCTCATCAGCT 57.175 33.333 0.00 0.00 40.44 4.24
2354 2807 9.825109 ATATGAATAGAATCATCTCATCAGCTG 57.175 33.333 7.63 7.63 40.44 4.24
2355 2808 7.299246 TGAATAGAATCATCTCATCAGCTGA 57.701 36.000 20.79 20.79 37.10 4.26
2356 2809 7.908453 TGAATAGAATCATCTCATCAGCTGAT 58.092 34.615 23.75 23.75 37.13 2.90
2357 2810 8.376270 TGAATAGAATCATCTCATCAGCTGATT 58.624 33.333 26.70 10.57 44.59 2.57
2358 2811 9.221933 GAATAGAATCATCTCATCAGCTGATTT 57.778 33.333 26.70 16.08 42.84 2.17
2359 2812 9.575868 AATAGAATCATCTCATCAGCTGATTTT 57.424 29.630 26.70 4.20 42.84 1.82
2362 2815 9.575868 AGAATCATCTCATCAGCTGATTTTATT 57.424 29.630 26.70 18.01 42.84 1.40
2363 2816 9.828852 GAATCATCTCATCAGCTGATTTTATTC 57.171 33.333 26.70 21.31 42.84 1.75
2364 2817 9.575868 AATCATCTCATCAGCTGATTTTATTCT 57.424 29.630 26.70 7.27 40.92 2.40
2365 2818 8.975663 TCATCTCATCAGCTGATTTTATTCTT 57.024 30.769 26.70 0.00 32.10 2.52
2366 2819 9.053840 TCATCTCATCAGCTGATTTTATTCTTC 57.946 33.333 26.70 0.00 32.10 2.87
2367 2820 8.837389 CATCTCATCAGCTGATTTTATTCTTCA 58.163 33.333 26.70 0.00 32.10 3.02
2368 2821 8.797350 TCTCATCAGCTGATTTTATTCTTCAA 57.203 30.769 26.70 0.00 32.10 2.69
2369 2822 9.234827 TCTCATCAGCTGATTTTATTCTTCAAA 57.765 29.630 26.70 0.00 32.10 2.69
2373 2826 9.813446 ATCAGCTGATTTTATTCTTCAAATTCC 57.187 29.630 23.75 0.00 0.00 3.01
2374 2827 8.253113 TCAGCTGATTTTATTCTTCAAATTCCC 58.747 33.333 13.74 0.00 0.00 3.97
2375 2828 7.493645 CAGCTGATTTTATTCTTCAAATTCCCC 59.506 37.037 8.42 0.00 0.00 4.81
2376 2829 6.476706 GCTGATTTTATTCTTCAAATTCCCCG 59.523 38.462 0.00 0.00 0.00 5.73
2377 2830 7.475137 TGATTTTATTCTTCAAATTCCCCGT 57.525 32.000 0.00 0.00 0.00 5.28
2378 2831 8.582657 TGATTTTATTCTTCAAATTCCCCGTA 57.417 30.769 0.00 0.00 0.00 4.02
2379 2832 9.026121 TGATTTTATTCTTCAAATTCCCCGTAA 57.974 29.630 0.00 0.00 0.00 3.18
2380 2833 9.863845 GATTTTATTCTTCAAATTCCCCGTAAA 57.136 29.630 0.00 0.00 0.00 2.01
2386 2839 9.869757 ATTCTTCAAATTCCCCGTAAAATAAAG 57.130 29.630 0.00 0.00 0.00 1.85
2387 2840 7.832769 TCTTCAAATTCCCCGTAAAATAAAGG 58.167 34.615 0.00 0.00 0.00 3.11
2388 2841 6.532988 TCAAATTCCCCGTAAAATAAAGGG 57.467 37.500 0.00 0.00 43.41 3.95
2389 2842 5.105269 TCAAATTCCCCGTAAAATAAAGGGC 60.105 40.000 0.00 0.00 42.47 5.19
2390 2843 3.743092 TTCCCCGTAAAATAAAGGGCT 57.257 42.857 0.00 0.00 42.47 5.19
2391 2844 3.007473 TCCCCGTAAAATAAAGGGCTG 57.993 47.619 0.00 0.00 42.47 4.85
2392 2845 2.309458 TCCCCGTAAAATAAAGGGCTGT 59.691 45.455 0.00 0.00 42.47 4.40
2393 2846 2.425668 CCCCGTAAAATAAAGGGCTGTG 59.574 50.000 0.00 0.00 42.47 3.66
2394 2847 2.159296 CCCGTAAAATAAAGGGCTGTGC 60.159 50.000 0.00 0.00 37.07 4.57
2395 2848 2.490115 CCGTAAAATAAAGGGCTGTGCA 59.510 45.455 0.00 0.00 0.00 4.57
2396 2849 3.498082 CGTAAAATAAAGGGCTGTGCAC 58.502 45.455 10.75 10.75 0.00 4.57
2397 2850 2.723124 AAAATAAAGGGCTGTGCACG 57.277 45.000 13.13 8.32 36.86 5.34
2398 2851 1.904287 AAATAAAGGGCTGTGCACGA 58.096 45.000 13.13 0.33 36.86 4.35
2399 2852 1.453155 AATAAAGGGCTGTGCACGAG 58.547 50.000 13.13 11.71 36.86 4.18
2400 2853 0.613260 ATAAAGGGCTGTGCACGAGA 59.387 50.000 13.13 0.00 36.86 4.04
2401 2854 0.320421 TAAAGGGCTGTGCACGAGAC 60.320 55.000 13.13 12.59 36.86 3.36
2402 2855 3.537206 AAGGGCTGTGCACGAGACC 62.537 63.158 25.33 25.33 39.20 3.85
2403 2856 4.008933 GGGCTGTGCACGAGACCT 62.009 66.667 25.37 0.00 35.45 3.85
2404 2857 2.031163 GGCTGTGCACGAGACCTT 59.969 61.111 13.13 0.00 0.00 3.50
2405 2858 2.029844 GGCTGTGCACGAGACCTTC 61.030 63.158 13.13 0.00 0.00 3.46
2406 2859 1.300931 GCTGTGCACGAGACCTTCA 60.301 57.895 13.13 0.00 0.00 3.02
2407 2860 0.880278 GCTGTGCACGAGACCTTCAA 60.880 55.000 13.13 0.00 0.00 2.69
2408 2861 1.581934 CTGTGCACGAGACCTTCAAA 58.418 50.000 13.13 0.00 0.00 2.69
2409 2862 1.261619 CTGTGCACGAGACCTTCAAAC 59.738 52.381 13.13 0.00 0.00 2.93
2410 2863 1.295792 GTGCACGAGACCTTCAAACA 58.704 50.000 0.00 0.00 0.00 2.83
2411 2864 1.668751 GTGCACGAGACCTTCAAACAA 59.331 47.619 0.00 0.00 0.00 2.83
2412 2865 2.096819 GTGCACGAGACCTTCAAACAAA 59.903 45.455 0.00 0.00 0.00 2.83
2413 2866 2.750166 TGCACGAGACCTTCAAACAAAA 59.250 40.909 0.00 0.00 0.00 2.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.227089 CGGCAGAGATTGTCCTCGG 60.227 63.158 0.00 0.00 38.19 4.63
1 2 1.880340 GCGGCAGAGATTGTCCTCG 60.880 63.158 0.00 0.00 38.19 4.63
2 3 1.522580 GGCGGCAGAGATTGTCCTC 60.523 63.158 3.07 0.00 0.00 3.71
3 4 2.586792 GGCGGCAGAGATTGTCCT 59.413 61.111 3.07 0.00 0.00 3.85
4 5 2.514824 GGGCGGCAGAGATTGTCC 60.515 66.667 12.47 0.00 0.00 4.02
5 6 1.817099 CTGGGCGGCAGAGATTGTC 60.817 63.158 12.47 0.00 0.00 3.18
6 7 2.270205 CTGGGCGGCAGAGATTGT 59.730 61.111 12.47 0.00 0.00 2.71
7 8 3.207669 GCTGGGCGGCAGAGATTG 61.208 66.667 12.47 0.00 0.00 2.67
8 9 3.720601 TGCTGGGCGGCAGAGATT 61.721 61.111 12.47 0.00 37.29 2.40
9 10 4.479993 GTGCTGGGCGGCAGAGAT 62.480 66.667 12.47 0.00 43.25 2.75
18 19 2.672996 ATTGGACACGTGCTGGGC 60.673 61.111 17.22 0.00 0.00 5.36
19 20 1.003355 AGATTGGACACGTGCTGGG 60.003 57.895 17.22 0.00 0.00 4.45
20 21 1.354337 CGAGATTGGACACGTGCTGG 61.354 60.000 17.22 0.58 0.00 4.85
21 22 0.388520 TCGAGATTGGACACGTGCTG 60.389 55.000 17.22 0.00 0.00 4.41
22 23 0.317160 TTCGAGATTGGACACGTGCT 59.683 50.000 17.22 2.68 0.00 4.40
23 24 1.144969 TTTCGAGATTGGACACGTGC 58.855 50.000 17.22 8.51 0.00 5.34
24 25 2.800544 AGTTTTCGAGATTGGACACGTG 59.199 45.455 15.48 15.48 0.00 4.49
25 26 2.800544 CAGTTTTCGAGATTGGACACGT 59.199 45.455 0.00 0.00 0.00 4.49
26 27 3.057019 TCAGTTTTCGAGATTGGACACG 58.943 45.455 0.00 0.00 0.00 4.49
27 28 3.807622 TGTCAGTTTTCGAGATTGGACAC 59.192 43.478 7.06 0.00 0.00 3.67
28 29 4.058124 CTGTCAGTTTTCGAGATTGGACA 58.942 43.478 9.79 9.79 33.48 4.02
29 30 3.120511 GCTGTCAGTTTTCGAGATTGGAC 60.121 47.826 0.93 0.00 0.00 4.02
30 31 3.067106 GCTGTCAGTTTTCGAGATTGGA 58.933 45.455 0.93 0.00 0.00 3.53
31 32 2.807967 TGCTGTCAGTTTTCGAGATTGG 59.192 45.455 0.93 0.00 0.00 3.16
32 33 4.472691 TTGCTGTCAGTTTTCGAGATTG 57.527 40.909 0.93 0.00 0.00 2.67
33 34 4.816385 TCTTTGCTGTCAGTTTTCGAGATT 59.184 37.500 0.93 0.00 0.00 2.40
34 35 4.380531 TCTTTGCTGTCAGTTTTCGAGAT 58.619 39.130 0.93 0.00 0.00 2.75
35 36 3.792401 TCTTTGCTGTCAGTTTTCGAGA 58.208 40.909 0.93 0.00 0.00 4.04
36 37 3.059325 CCTCTTTGCTGTCAGTTTTCGAG 60.059 47.826 0.93 2.28 0.00 4.04
37 38 2.872245 CCTCTTTGCTGTCAGTTTTCGA 59.128 45.455 0.93 0.00 0.00 3.71
38 39 2.872245 TCCTCTTTGCTGTCAGTTTTCG 59.128 45.455 0.93 0.00 0.00 3.46
39 40 3.251972 CCTCCTCTTTGCTGTCAGTTTTC 59.748 47.826 0.93 0.00 0.00 2.29
40 41 3.117888 TCCTCCTCTTTGCTGTCAGTTTT 60.118 43.478 0.93 0.00 0.00 2.43
41 42 2.439507 TCCTCCTCTTTGCTGTCAGTTT 59.560 45.455 0.93 0.00 0.00 2.66
42 43 2.050144 TCCTCCTCTTTGCTGTCAGTT 58.950 47.619 0.93 0.00 0.00 3.16
43 44 1.346068 GTCCTCCTCTTTGCTGTCAGT 59.654 52.381 0.93 0.00 0.00 3.41
44 45 1.345741 TGTCCTCCTCTTTGCTGTCAG 59.654 52.381 0.00 0.00 0.00 3.51
45 46 1.070758 GTGTCCTCCTCTTTGCTGTCA 59.929 52.381 0.00 0.00 0.00 3.58
46 47 1.802069 GTGTCCTCCTCTTTGCTGTC 58.198 55.000 0.00 0.00 0.00 3.51
47 48 0.034059 CGTGTCCTCCTCTTTGCTGT 59.966 55.000 0.00 0.00 0.00 4.40
48 49 0.671781 CCGTGTCCTCCTCTTTGCTG 60.672 60.000 0.00 0.00 0.00 4.41
49 50 1.674057 CCGTGTCCTCCTCTTTGCT 59.326 57.895 0.00 0.00 0.00 3.91
50 51 2.035442 GCCGTGTCCTCCTCTTTGC 61.035 63.158 0.00 0.00 0.00 3.68
51 52 0.951040 GTGCCGTGTCCTCCTCTTTG 60.951 60.000 0.00 0.00 0.00 2.77
52 53 1.371558 GTGCCGTGTCCTCCTCTTT 59.628 57.895 0.00 0.00 0.00 2.52
53 54 1.407656 TTGTGCCGTGTCCTCCTCTT 61.408 55.000 0.00 0.00 0.00 2.85
54 55 1.821061 CTTGTGCCGTGTCCTCCTCT 61.821 60.000 0.00 0.00 0.00 3.69
55 56 1.374758 CTTGTGCCGTGTCCTCCTC 60.375 63.158 0.00 0.00 0.00 3.71
56 57 1.821061 CTCTTGTGCCGTGTCCTCCT 61.821 60.000 0.00 0.00 0.00 3.69
57 58 1.374758 CTCTTGTGCCGTGTCCTCC 60.375 63.158 0.00 0.00 0.00 4.30
58 59 2.029844 GCTCTTGTGCCGTGTCCTC 61.030 63.158 0.00 0.00 0.00 3.71
59 60 2.031163 GCTCTTGTGCCGTGTCCT 59.969 61.111 0.00 0.00 0.00 3.85
60 61 3.050275 GGCTCTTGTGCCGTGTCC 61.050 66.667 0.00 0.00 43.74 4.02
67 68 2.050077 GGTTTGCGGCTCTTGTGC 60.050 61.111 0.00 0.00 0.00 4.57
68 69 2.252260 CGGTTTGCGGCTCTTGTG 59.748 61.111 0.00 0.00 0.00 3.33
69 70 2.203153 ACGGTTTGCGGCTCTTGT 60.203 55.556 0.00 0.00 0.00 3.16
70 71 2.252260 CACGGTTTGCGGCTCTTG 59.748 61.111 0.00 0.00 0.00 3.02
71 72 3.660111 GCACGGTTTGCGGCTCTT 61.660 61.111 0.00 0.00 42.79 2.85
79 80 2.890847 TTTTGGGTGCGCACGGTTTG 62.891 55.000 32.35 0.00 0.00 2.93
80 81 2.022240 ATTTTGGGTGCGCACGGTTT 62.022 50.000 32.35 13.26 0.00 3.27
81 82 2.494530 ATTTTGGGTGCGCACGGTT 61.495 52.632 32.35 12.21 0.00 4.44
82 83 2.909965 ATTTTGGGTGCGCACGGT 60.910 55.556 32.35 12.54 0.00 4.83
83 84 1.857318 TACATTTTGGGTGCGCACGG 61.857 55.000 32.35 17.44 0.00 4.94
84 85 0.454285 CTACATTTTGGGTGCGCACG 60.454 55.000 32.35 19.60 0.00 5.34
85 86 0.109319 CCTACATTTTGGGTGCGCAC 60.109 55.000 32.15 32.15 0.00 5.34
86 87 1.247419 CCCTACATTTTGGGTGCGCA 61.247 55.000 5.66 5.66 38.65 6.09
87 88 1.510844 CCCTACATTTTGGGTGCGC 59.489 57.895 0.00 0.00 38.65 6.09
93 94 3.790789 GCGCGATAAACCCTACATTTTGG 60.791 47.826 12.10 0.00 0.00 3.28
94 95 3.181505 TGCGCGATAAACCCTACATTTTG 60.182 43.478 12.10 0.00 0.00 2.44
95 96 3.011119 TGCGCGATAAACCCTACATTTT 58.989 40.909 12.10 0.00 0.00 1.82
96 97 2.612212 CTGCGCGATAAACCCTACATTT 59.388 45.455 12.10 0.00 0.00 2.32
97 98 2.210116 CTGCGCGATAAACCCTACATT 58.790 47.619 12.10 0.00 0.00 2.71
98 99 1.865865 CTGCGCGATAAACCCTACAT 58.134 50.000 12.10 0.00 0.00 2.29
99 100 0.808453 GCTGCGCGATAAACCCTACA 60.808 55.000 12.10 0.00 0.00 2.74
100 101 0.808453 TGCTGCGCGATAAACCCTAC 60.808 55.000 12.10 0.00 0.00 3.18
101 102 0.105964 ATGCTGCGCGATAAACCCTA 59.894 50.000 12.10 0.00 0.00 3.53
102 103 1.153168 ATGCTGCGCGATAAACCCT 60.153 52.632 12.10 0.00 0.00 4.34
103 104 1.160329 AGATGCTGCGCGATAAACCC 61.160 55.000 12.10 0.00 0.00 4.11
104 105 1.497991 TAGATGCTGCGCGATAAACC 58.502 50.000 12.10 0.00 0.00 3.27
105 106 2.159787 CCATAGATGCTGCGCGATAAAC 60.160 50.000 12.10 0.00 0.00 2.01
106 107 2.068519 CCATAGATGCTGCGCGATAAA 58.931 47.619 12.10 0.00 0.00 1.40
107 108 1.000843 ACCATAGATGCTGCGCGATAA 59.999 47.619 12.10 0.00 0.00 1.75
108 109 0.603065 ACCATAGATGCTGCGCGATA 59.397 50.000 12.10 0.00 0.00 2.92
109 110 0.603065 TACCATAGATGCTGCGCGAT 59.397 50.000 12.10 0.00 0.00 4.58
110 111 0.387565 TTACCATAGATGCTGCGCGA 59.612 50.000 12.10 0.00 0.00 5.87
111 112 0.786581 CTTACCATAGATGCTGCGCG 59.213 55.000 0.00 0.00 0.00 6.86
112 113 1.151668 CCTTACCATAGATGCTGCGC 58.848 55.000 0.00 0.00 0.00 6.09
113 114 1.344438 TCCCTTACCATAGATGCTGCG 59.656 52.381 0.00 0.00 0.00 5.18
114 115 2.289945 CCTCCCTTACCATAGATGCTGC 60.290 54.545 0.00 0.00 0.00 5.25
115 116 3.242867 TCCTCCCTTACCATAGATGCTG 58.757 50.000 0.00 0.00 0.00 4.41
116 117 3.142977 TCTCCTCCCTTACCATAGATGCT 59.857 47.826 0.00 0.00 0.00 3.79
117 118 3.511477 TCTCCTCCCTTACCATAGATGC 58.489 50.000 0.00 0.00 0.00 3.91
118 119 4.093011 CCTCTCCTCCCTTACCATAGATG 58.907 52.174 0.00 0.00 0.00 2.90
119 120 3.997856 TCCTCTCCTCCCTTACCATAGAT 59.002 47.826 0.00 0.00 0.00 1.98
120 121 3.140519 GTCCTCTCCTCCCTTACCATAGA 59.859 52.174 0.00 0.00 0.00 1.98
121 122 3.141272 AGTCCTCTCCTCCCTTACCATAG 59.859 52.174 0.00 0.00 0.00 2.23
122 123 3.117093 CAGTCCTCTCCTCCCTTACCATA 60.117 52.174 0.00 0.00 0.00 2.74
123 124 1.940957 AGTCCTCTCCTCCCTTACCAT 59.059 52.381 0.00 0.00 0.00 3.55
124 125 1.007238 CAGTCCTCTCCTCCCTTACCA 59.993 57.143 0.00 0.00 0.00 3.25
125 126 1.783071 CAGTCCTCTCCTCCCTTACC 58.217 60.000 0.00 0.00 0.00 2.85
126 127 1.116308 GCAGTCCTCTCCTCCCTTAC 58.884 60.000 0.00 0.00 0.00 2.34
127 128 0.710588 TGCAGTCCTCTCCTCCCTTA 59.289 55.000 0.00 0.00 0.00 2.69
128 129 0.617249 CTGCAGTCCTCTCCTCCCTT 60.617 60.000 5.25 0.00 0.00 3.95
129 130 1.001503 CTGCAGTCCTCTCCTCCCT 59.998 63.158 5.25 0.00 0.00 4.20
130 131 2.730524 GCTGCAGTCCTCTCCTCCC 61.731 68.421 16.64 0.00 0.00 4.30
131 132 2.899505 GCTGCAGTCCTCTCCTCC 59.100 66.667 16.64 0.00 0.00 4.30
132 133 2.049185 TCGCTGCAGTCCTCTCCTC 61.049 63.158 16.64 0.00 0.00 3.71
133 134 2.036414 TCGCTGCAGTCCTCTCCT 59.964 61.111 16.64 0.00 0.00 3.69
134 135 2.183046 GTCGCTGCAGTCCTCTCC 59.817 66.667 16.64 0.00 0.00 3.71
135 136 2.202544 CGTCGCTGCAGTCCTCTC 60.203 66.667 16.64 0.00 0.00 3.20
136 137 3.753434 CCGTCGCTGCAGTCCTCT 61.753 66.667 16.64 0.00 0.00 3.69
167 168 1.378911 TATGGCTGTGGCTGCCTTG 60.379 57.895 21.03 10.66 46.43 3.61
168 169 1.077212 CTATGGCTGTGGCTGCCTT 60.077 57.895 21.03 12.64 46.43 4.35
169 170 2.593978 CTATGGCTGTGGCTGCCT 59.406 61.111 21.03 0.00 46.43 4.75
170 171 2.517875 CCTATGGCTGTGGCTGCC 60.518 66.667 12.87 12.87 46.46 4.85
171 172 3.214845 GCCTATGGCTGTGGCTGC 61.215 66.667 0.73 0.00 46.69 5.25
180 181 0.664767 GAGATGACGACGCCTATGGC 60.665 60.000 0.00 0.00 46.75 4.40
181 182 0.668535 TGAGATGACGACGCCTATGG 59.331 55.000 0.00 0.00 0.00 2.74
182 183 2.713895 ATGAGATGACGACGCCTATG 57.286 50.000 0.00 0.00 0.00 2.23
183 184 3.413327 AGTATGAGATGACGACGCCTAT 58.587 45.455 0.00 0.00 0.00 2.57
184 185 2.847441 AGTATGAGATGACGACGCCTA 58.153 47.619 0.00 0.00 0.00 3.93
185 186 1.681538 AGTATGAGATGACGACGCCT 58.318 50.000 0.00 0.00 0.00 5.52
186 187 2.095668 CCTAGTATGAGATGACGACGCC 60.096 54.545 0.00 0.00 0.00 5.68
187 188 2.548904 ACCTAGTATGAGATGACGACGC 59.451 50.000 0.00 0.00 0.00 5.19
188 189 3.058846 CCACCTAGTATGAGATGACGACG 60.059 52.174 0.00 0.00 0.00 5.12
189 190 3.884091 ACCACCTAGTATGAGATGACGAC 59.116 47.826 0.00 0.00 0.00 4.34
190 191 4.166246 ACCACCTAGTATGAGATGACGA 57.834 45.455 0.00 0.00 0.00 4.20
191 192 4.338400 TCAACCACCTAGTATGAGATGACG 59.662 45.833 0.00 0.00 0.00 4.35
192 193 5.221342 CCTCAACCACCTAGTATGAGATGAC 60.221 48.000 2.82 0.00 39.85 3.06
193 194 4.895889 CCTCAACCACCTAGTATGAGATGA 59.104 45.833 2.82 0.00 39.85 2.92
194 195 4.895889 TCCTCAACCACCTAGTATGAGATG 59.104 45.833 2.82 0.00 39.85 2.90
195 196 4.896482 GTCCTCAACCACCTAGTATGAGAT 59.104 45.833 2.82 0.00 39.85 2.75
196 197 4.279145 GTCCTCAACCACCTAGTATGAGA 58.721 47.826 2.82 0.00 39.85 3.27
197 198 3.066900 CGTCCTCAACCACCTAGTATGAG 59.933 52.174 0.00 0.00 37.77 2.90
198 199 3.021695 CGTCCTCAACCACCTAGTATGA 58.978 50.000 0.00 0.00 0.00 2.15
199 200 2.100916 CCGTCCTCAACCACCTAGTATG 59.899 54.545 0.00 0.00 0.00 2.39
200 201 2.385803 CCGTCCTCAACCACCTAGTAT 58.614 52.381 0.00 0.00 0.00 2.12
201 202 1.617804 CCCGTCCTCAACCACCTAGTA 60.618 57.143 0.00 0.00 0.00 1.82
202 203 0.903454 CCCGTCCTCAACCACCTAGT 60.903 60.000 0.00 0.00 0.00 2.57
203 204 1.614241 CCCCGTCCTCAACCACCTAG 61.614 65.000 0.00 0.00 0.00 3.02
204 205 1.611261 CCCCGTCCTCAACCACCTA 60.611 63.158 0.00 0.00 0.00 3.08
205 206 2.928396 CCCCGTCCTCAACCACCT 60.928 66.667 0.00 0.00 0.00 4.00
206 207 4.717313 GCCCCGTCCTCAACCACC 62.717 72.222 0.00 0.00 0.00 4.61
243 244 4.673375 CTGGCAGCAACCCCAGCT 62.673 66.667 0.00 0.00 41.86 4.24
249 250 3.455469 GATGGGCTGGCAGCAACC 61.455 66.667 37.49 29.89 44.75 3.77
250 251 3.455469 GGATGGGCTGGCAGCAAC 61.455 66.667 37.49 29.14 44.75 4.17
251 252 3.526600 TTGGATGGGCTGGCAGCAA 62.527 57.895 37.49 26.37 44.75 3.91
252 253 3.949885 CTTGGATGGGCTGGCAGCA 62.950 63.158 37.49 21.31 44.75 4.41
253 254 3.145551 CTTGGATGGGCTGGCAGC 61.146 66.667 30.93 30.93 41.46 5.25
254 255 1.304713 AACTTGGATGGGCTGGCAG 60.305 57.895 10.94 10.94 0.00 4.85
255 256 1.304381 GAACTTGGATGGGCTGGCA 60.304 57.895 2.88 0.00 0.00 4.92
256 257 2.409870 CGAACTTGGATGGGCTGGC 61.410 63.158 0.00 0.00 0.00 4.85
257 258 0.745845 CTCGAACTTGGATGGGCTGG 60.746 60.000 0.00 0.00 0.00 4.85
258 259 0.036010 ACTCGAACTTGGATGGGCTG 60.036 55.000 0.00 0.00 0.00 4.85
259 260 0.250513 GACTCGAACTTGGATGGGCT 59.749 55.000 0.00 0.00 0.00 5.19
260 261 0.744771 GGACTCGAACTTGGATGGGC 60.745 60.000 0.00 0.00 0.00 5.36
261 262 0.107654 GGGACTCGAACTTGGATGGG 60.108 60.000 0.00 0.00 0.00 4.00
262 263 0.460284 CGGGACTCGAACTTGGATGG 60.460 60.000 0.00 0.00 42.43 3.51
263 264 0.530744 TCGGGACTCGAACTTGGATG 59.469 55.000 0.00 0.00 45.86 3.51
264 265 2.971676 TCGGGACTCGAACTTGGAT 58.028 52.632 0.00 0.00 45.86 3.41
265 266 4.506039 TCGGGACTCGAACTTGGA 57.494 55.556 0.00 0.00 45.86 3.53
291 292 0.739462 TAAACTCCATGAGCACCGCG 60.739 55.000 0.00 0.00 32.04 6.46
292 293 1.599542 GATAAACTCCATGAGCACCGC 59.400 52.381 0.00 0.00 32.04 5.68
293 294 2.213499 GGATAAACTCCATGAGCACCG 58.787 52.381 0.00 0.00 44.26 4.94
303 304 8.691661 TGGCATTTTCTTATAGGATAAACTCC 57.308 34.615 0.00 0.00 45.33 3.85
304 305 9.952188 GTTGGCATTTTCTTATAGGATAAACTC 57.048 33.333 0.00 0.00 0.00 3.01
305 306 8.621286 CGTTGGCATTTTCTTATAGGATAAACT 58.379 33.333 0.00 0.00 0.00 2.66
306 307 8.617809 TCGTTGGCATTTTCTTATAGGATAAAC 58.382 33.333 0.00 0.00 0.00 2.01
307 308 8.740123 TCGTTGGCATTTTCTTATAGGATAAA 57.260 30.769 0.00 0.00 0.00 1.40
308 309 7.444183 CCTCGTTGGCATTTTCTTATAGGATAA 59.556 37.037 0.00 0.00 0.00 1.75
309 310 6.934645 CCTCGTTGGCATTTTCTTATAGGATA 59.065 38.462 0.00 0.00 0.00 2.59
310 311 5.765182 CCTCGTTGGCATTTTCTTATAGGAT 59.235 40.000 0.00 0.00 0.00 3.24
311 312 5.123227 CCTCGTTGGCATTTTCTTATAGGA 58.877 41.667 0.00 0.00 0.00 2.94
312 313 4.881850 ACCTCGTTGGCATTTTCTTATAGG 59.118 41.667 0.00 0.00 40.22 2.57
313 314 5.220854 CCACCTCGTTGGCATTTTCTTATAG 60.221 44.000 0.00 0.00 40.22 1.31
314 315 4.638421 CCACCTCGTTGGCATTTTCTTATA 59.362 41.667 0.00 0.00 40.22 0.98
315 316 3.443681 CCACCTCGTTGGCATTTTCTTAT 59.556 43.478 0.00 0.00 40.22 1.73
316 317 2.817258 CCACCTCGTTGGCATTTTCTTA 59.183 45.455 0.00 0.00 40.22 2.10
317 318 1.613437 CCACCTCGTTGGCATTTTCTT 59.387 47.619 0.00 0.00 40.22 2.52
318 319 1.247567 CCACCTCGTTGGCATTTTCT 58.752 50.000 0.00 0.00 40.22 2.52
319 320 0.243636 CCCACCTCGTTGGCATTTTC 59.756 55.000 0.00 0.00 40.22 2.29
320 321 0.469144 ACCCACCTCGTTGGCATTTT 60.469 50.000 0.00 0.00 40.22 1.82
321 322 0.469144 AACCCACCTCGTTGGCATTT 60.469 50.000 0.00 0.00 40.22 2.32
322 323 1.152830 AACCCACCTCGTTGGCATT 59.847 52.632 0.00 0.00 40.22 3.56
323 324 1.603455 CAACCCACCTCGTTGGCAT 60.603 57.895 0.00 0.00 40.22 4.40
324 325 2.203280 CAACCCACCTCGTTGGCA 60.203 61.111 0.00 0.00 40.22 4.92
327 328 1.153046 ACACCAACCCACCTCGTTG 60.153 57.895 0.00 0.00 40.25 4.10
328 329 1.147600 GACACCAACCCACCTCGTT 59.852 57.895 0.00 0.00 0.00 3.85
329 330 1.415672 ATGACACCAACCCACCTCGT 61.416 55.000 0.00 0.00 0.00 4.18
330 331 0.250727 AATGACACCAACCCACCTCG 60.251 55.000 0.00 0.00 0.00 4.63
331 332 1.995376 AAATGACACCAACCCACCTC 58.005 50.000 0.00 0.00 0.00 3.85
332 333 2.316108 GAAAATGACACCAACCCACCT 58.684 47.619 0.00 0.00 0.00 4.00
333 334 1.000717 CGAAAATGACACCAACCCACC 60.001 52.381 0.00 0.00 0.00 4.61
334 335 1.679153 ACGAAAATGACACCAACCCAC 59.321 47.619 0.00 0.00 0.00 4.61
335 336 2.060050 ACGAAAATGACACCAACCCA 57.940 45.000 0.00 0.00 0.00 4.51
336 337 3.143728 AGTACGAAAATGACACCAACCC 58.856 45.455 0.00 0.00 0.00 4.11
337 338 4.992951 AGTAGTACGAAAATGACACCAACC 59.007 41.667 0.00 0.00 0.00 3.77
338 339 5.107220 CCAGTAGTACGAAAATGACACCAAC 60.107 44.000 0.00 0.00 0.00 3.77
339 340 4.992319 CCAGTAGTACGAAAATGACACCAA 59.008 41.667 0.00 0.00 0.00 3.67
340 341 4.562082 CCAGTAGTACGAAAATGACACCA 58.438 43.478 0.00 0.00 0.00 4.17
341 342 3.370061 GCCAGTAGTACGAAAATGACACC 59.630 47.826 0.00 0.00 0.00 4.16
342 343 3.991773 TGCCAGTAGTACGAAAATGACAC 59.008 43.478 0.00 0.00 0.00 3.67
343 344 4.242475 CTGCCAGTAGTACGAAAATGACA 58.758 43.478 0.00 0.00 0.00 3.58
344 345 4.091509 CACTGCCAGTAGTACGAAAATGAC 59.908 45.833 0.00 0.00 0.00 3.06
345 346 4.242475 CACTGCCAGTAGTACGAAAATGA 58.758 43.478 0.00 0.00 0.00 2.57
346 347 3.370978 CCACTGCCAGTAGTACGAAAATG 59.629 47.826 0.00 0.00 0.00 2.32
347 348 3.596214 CCACTGCCAGTAGTACGAAAAT 58.404 45.455 0.00 0.00 0.00 1.82
348 349 2.868839 GCCACTGCCAGTAGTACGAAAA 60.869 50.000 0.00 0.00 0.00 2.29
349 350 1.337447 GCCACTGCCAGTAGTACGAAA 60.337 52.381 0.00 0.00 0.00 3.46
350 351 0.245539 GCCACTGCCAGTAGTACGAA 59.754 55.000 0.00 0.00 0.00 3.85
351 352 0.896479 TGCCACTGCCAGTAGTACGA 60.896 55.000 0.00 0.00 36.33 3.43
352 353 0.458543 CTGCCACTGCCAGTAGTACG 60.459 60.000 0.00 0.00 36.33 3.67
353 354 0.608640 ACTGCCACTGCCAGTAGTAC 59.391 55.000 0.00 0.00 36.33 2.73
354 355 0.608130 CACTGCCACTGCCAGTAGTA 59.392 55.000 0.00 0.00 36.33 1.82
355 356 1.372683 CACTGCCACTGCCAGTAGT 59.627 57.895 0.00 0.00 36.33 2.73
356 357 1.376424 CCACTGCCACTGCCAGTAG 60.376 63.158 0.00 0.00 36.33 2.57
357 358 2.749682 CCACTGCCACTGCCAGTA 59.250 61.111 0.00 0.00 36.33 2.74
358 359 4.962836 GCCACTGCCACTGCCAGT 62.963 66.667 0.00 0.00 36.33 4.00
359 360 4.960866 TGCCACTGCCACTGCCAG 62.961 66.667 0.00 0.00 36.33 4.85
360 361 4.960866 CTGCCACTGCCACTGCCA 62.961 66.667 0.00 0.00 36.33 4.92
361 362 4.962836 ACTGCCACTGCCACTGCC 62.963 66.667 0.00 0.00 36.33 4.85
362 363 3.667282 CACTGCCACTGCCACTGC 61.667 66.667 0.00 0.00 36.33 4.40
363 364 2.981909 CCACTGCCACTGCCACTG 60.982 66.667 0.00 0.00 36.33 3.66
364 365 3.170672 TCCACTGCCACTGCCACT 61.171 61.111 0.00 0.00 36.33 4.00
365 366 2.980233 GTCCACTGCCACTGCCAC 60.980 66.667 0.00 0.00 36.33 5.01
366 367 4.624364 CGTCCACTGCCACTGCCA 62.624 66.667 0.00 0.00 36.33 4.92
367 368 4.314440 TCGTCCACTGCCACTGCC 62.314 66.667 0.00 0.00 36.33 4.85
368 369 3.044305 GTCGTCCACTGCCACTGC 61.044 66.667 0.00 0.00 38.26 4.40
369 370 2.357517 GGTCGTCCACTGCCACTG 60.358 66.667 0.00 0.00 0.00 3.66
370 371 2.524394 AGGTCGTCCACTGCCACT 60.524 61.111 0.51 0.00 35.89 4.00
371 372 2.357517 CAGGTCGTCCACTGCCAC 60.358 66.667 0.51 0.00 35.89 5.01
372 373 3.625897 CCAGGTCGTCCACTGCCA 61.626 66.667 0.51 0.00 35.89 4.92
373 374 2.788191 CTTCCAGGTCGTCCACTGCC 62.788 65.000 0.51 0.00 35.89 4.85
374 375 1.374758 CTTCCAGGTCGTCCACTGC 60.375 63.158 0.51 0.00 35.89 4.40
375 376 1.254026 TACTTCCAGGTCGTCCACTG 58.746 55.000 0.51 0.00 35.89 3.66
376 377 2.005370 TTACTTCCAGGTCGTCCACT 57.995 50.000 0.51 0.00 35.89 4.00
377 378 2.618053 CATTACTTCCAGGTCGTCCAC 58.382 52.381 0.51 0.00 35.89 4.02
378 379 1.553248 CCATTACTTCCAGGTCGTCCA 59.447 52.381 0.51 0.00 35.89 4.02
379 380 1.553704 ACCATTACTTCCAGGTCGTCC 59.446 52.381 0.00 0.00 0.00 4.79
380 381 2.618053 CACCATTACTTCCAGGTCGTC 58.382 52.381 0.00 0.00 30.44 4.20
381 382 1.338769 GCACCATTACTTCCAGGTCGT 60.339 52.381 0.00 0.00 30.44 4.34
382 383 1.338674 TGCACCATTACTTCCAGGTCG 60.339 52.381 0.00 0.00 30.44 4.79
383 384 2.084546 GTGCACCATTACTTCCAGGTC 58.915 52.381 5.22 0.00 30.44 3.85
384 385 1.610624 CGTGCACCATTACTTCCAGGT 60.611 52.381 12.15 0.00 33.91 4.00
385 386 1.086696 CGTGCACCATTACTTCCAGG 58.913 55.000 12.15 0.00 0.00 4.45
386 387 1.732259 GACGTGCACCATTACTTCCAG 59.268 52.381 12.15 0.00 0.00 3.86
387 388 1.803334 GACGTGCACCATTACTTCCA 58.197 50.000 12.15 0.00 0.00 3.53
388 389 0.719465 CGACGTGCACCATTACTTCC 59.281 55.000 12.15 0.00 0.00 3.46
389 390 0.094730 GCGACGTGCACCATTACTTC 59.905 55.000 12.15 0.00 45.45 3.01
390 391 2.159181 GCGACGTGCACCATTACTT 58.841 52.632 12.15 0.00 45.45 2.24
391 392 3.870606 GCGACGTGCACCATTACT 58.129 55.556 12.15 0.00 45.45 2.24
413 414 2.481276 GCAAAGCTTCGACCACCTTTTT 60.481 45.455 0.00 0.00 0.00 1.94
414 415 1.067060 GCAAAGCTTCGACCACCTTTT 59.933 47.619 0.00 0.00 0.00 2.27
415 416 0.668535 GCAAAGCTTCGACCACCTTT 59.331 50.000 0.00 0.00 0.00 3.11
416 417 1.172812 GGCAAAGCTTCGACCACCTT 61.173 55.000 0.00 0.00 0.00 3.50
417 418 1.600916 GGCAAAGCTTCGACCACCT 60.601 57.895 0.00 0.00 0.00 4.00
418 419 1.600916 AGGCAAAGCTTCGACCACC 60.601 57.895 0.00 0.00 0.00 4.61
419 420 1.166531 ACAGGCAAAGCTTCGACCAC 61.167 55.000 0.00 0.00 0.00 4.16
420 421 0.884704 GACAGGCAAAGCTTCGACCA 60.885 55.000 0.00 0.00 0.00 4.02
421 422 0.884704 TGACAGGCAAAGCTTCGACC 60.885 55.000 0.00 1.38 0.00 4.79
422 423 1.135859 CATGACAGGCAAAGCTTCGAC 60.136 52.381 0.00 0.00 0.00 4.20
423 424 1.159285 CATGACAGGCAAAGCTTCGA 58.841 50.000 0.00 0.00 0.00 3.71
424 425 0.169672 CCATGACAGGCAAAGCTTCG 59.830 55.000 0.00 0.00 0.00 3.79
425 426 0.529378 CCCATGACAGGCAAAGCTTC 59.471 55.000 0.00 0.00 0.00 3.86
426 427 0.901580 CCCCATGACAGGCAAAGCTT 60.902 55.000 0.00 0.00 0.00 3.74
427 428 1.304713 CCCCATGACAGGCAAAGCT 60.305 57.895 0.00 0.00 0.00 3.74
428 429 0.685458 ATCCCCATGACAGGCAAAGC 60.685 55.000 0.00 0.00 0.00 3.51
429 430 1.341285 TGATCCCCATGACAGGCAAAG 60.341 52.381 0.00 0.00 0.00 2.77
430 431 0.703488 TGATCCCCATGACAGGCAAA 59.297 50.000 0.00 0.00 0.00 3.68
431 432 0.703488 TTGATCCCCATGACAGGCAA 59.297 50.000 0.00 0.00 0.00 4.52
432 433 0.703488 TTTGATCCCCATGACAGGCA 59.297 50.000 0.00 0.00 0.00 4.75
433 434 1.851304 TTTTGATCCCCATGACAGGC 58.149 50.000 0.00 0.00 0.00 4.85
434 435 2.696707 CCATTTTGATCCCCATGACAGG 59.303 50.000 0.00 0.00 0.00 4.00
435 436 3.368248 ACCATTTTGATCCCCATGACAG 58.632 45.455 0.00 0.00 0.00 3.51
436 437 3.471430 ACCATTTTGATCCCCATGACA 57.529 42.857 0.00 0.00 0.00 3.58
437 438 4.709397 TGTTACCATTTTGATCCCCATGAC 59.291 41.667 0.00 0.00 0.00 3.06
438 439 4.940483 TGTTACCATTTTGATCCCCATGA 58.060 39.130 0.00 0.00 0.00 3.07
439 440 4.955450 TCTGTTACCATTTTGATCCCCATG 59.045 41.667 0.00 0.00 0.00 3.66
440 441 5.205517 TCTGTTACCATTTTGATCCCCAT 57.794 39.130 0.00 0.00 0.00 4.00
441 442 4.666412 TCTGTTACCATTTTGATCCCCA 57.334 40.909 0.00 0.00 0.00 4.96
442 443 5.993748 TTTCTGTTACCATTTTGATCCCC 57.006 39.130 0.00 0.00 0.00 4.81
443 444 7.169158 TCATTTCTGTTACCATTTTGATCCC 57.831 36.000 0.00 0.00 0.00 3.85
444 445 9.090692 CATTCATTTCTGTTACCATTTTGATCC 57.909 33.333 0.00 0.00 0.00 3.36
445 446 9.643693 ACATTCATTTCTGTTACCATTTTGATC 57.356 29.630 0.00 0.00 0.00 2.92
446 447 9.643693 GACATTCATTTCTGTTACCATTTTGAT 57.356 29.630 0.00 0.00 0.00 2.57
447 448 7.807433 CGACATTCATTTCTGTTACCATTTTGA 59.193 33.333 0.00 0.00 0.00 2.69
448 449 7.594758 ACGACATTCATTTCTGTTACCATTTTG 59.405 33.333 0.00 0.00 0.00 2.44
449 450 7.594758 CACGACATTCATTTCTGTTACCATTTT 59.405 33.333 0.00 0.00 0.00 1.82
450 451 7.083858 CACGACATTCATTTCTGTTACCATTT 58.916 34.615 0.00 0.00 0.00 2.32
451 452 6.611381 CACGACATTCATTTCTGTTACCATT 58.389 36.000 0.00 0.00 0.00 3.16
452 453 5.391950 GCACGACATTCATTTCTGTTACCAT 60.392 40.000 0.00 0.00 0.00 3.55
453 454 4.083537 GCACGACATTCATTTCTGTTACCA 60.084 41.667 0.00 0.00 0.00 3.25
454 455 4.083537 TGCACGACATTCATTTCTGTTACC 60.084 41.667 0.00 0.00 0.00 2.85
455 456 5.029650 TGCACGACATTCATTTCTGTTAC 57.970 39.130 0.00 0.00 0.00 2.50
456 457 5.411053 TCATGCACGACATTCATTTCTGTTA 59.589 36.000 0.00 0.00 36.64 2.41
457 458 4.216042 TCATGCACGACATTCATTTCTGTT 59.784 37.500 0.00 0.00 36.64 3.16
458 459 3.752747 TCATGCACGACATTCATTTCTGT 59.247 39.130 0.00 0.00 36.64 3.41
459 460 4.345271 TCATGCACGACATTCATTTCTG 57.655 40.909 0.00 0.00 36.64 3.02
460 461 5.356190 AGATTCATGCACGACATTCATTTCT 59.644 36.000 0.00 0.00 36.64 2.52
461 462 5.575957 AGATTCATGCACGACATTCATTTC 58.424 37.500 0.00 0.00 36.64 2.17
462 463 5.124297 TGAGATTCATGCACGACATTCATTT 59.876 36.000 0.00 0.00 36.64 2.32
463 464 4.637091 TGAGATTCATGCACGACATTCATT 59.363 37.500 0.00 0.00 36.64 2.57
464 465 4.034858 GTGAGATTCATGCACGACATTCAT 59.965 41.667 0.00 0.00 36.64 2.57
465 466 3.371898 GTGAGATTCATGCACGACATTCA 59.628 43.478 0.00 0.00 36.64 2.57
466 467 3.933031 GTGAGATTCATGCACGACATTC 58.067 45.455 0.00 0.00 36.64 2.67
495 496 1.782023 CGTCTTATTGCGCGTGAACAC 60.782 52.381 8.43 0.00 0.00 3.32
496 497 0.436913 CGTCTTATTGCGCGTGAACA 59.563 50.000 8.43 0.00 0.00 3.18
497 498 0.247145 CCGTCTTATTGCGCGTGAAC 60.247 55.000 8.43 0.00 0.00 3.18
498 499 0.388778 TCCGTCTTATTGCGCGTGAA 60.389 50.000 8.43 0.78 0.00 3.18
499 500 0.800683 CTCCGTCTTATTGCGCGTGA 60.801 55.000 8.43 0.00 0.00 4.35
500 501 0.800683 TCTCCGTCTTATTGCGCGTG 60.801 55.000 8.43 0.00 0.00 5.34
501 502 0.102481 ATCTCCGTCTTATTGCGCGT 59.898 50.000 8.43 0.00 0.00 6.01
502 503 2.046283 TATCTCCGTCTTATTGCGCG 57.954 50.000 0.00 0.00 0.00 6.86
503 504 4.515432 GTTTTATCTCCGTCTTATTGCGC 58.485 43.478 0.00 0.00 0.00 6.09
504 505 4.317839 CGGTTTTATCTCCGTCTTATTGCG 60.318 45.833 0.00 0.00 41.58 4.85
505 506 4.025145 CCGGTTTTATCTCCGTCTTATTGC 60.025 45.833 0.00 0.00 44.51 3.56
506 507 4.510340 CCCGGTTTTATCTCCGTCTTATTG 59.490 45.833 0.00 0.00 44.51 1.90
507 508 4.443881 CCCCGGTTTTATCTCCGTCTTATT 60.444 45.833 0.00 0.00 44.51 1.40
508 509 3.070590 CCCCGGTTTTATCTCCGTCTTAT 59.929 47.826 0.00 0.00 44.51 1.73
509 510 2.431782 CCCCGGTTTTATCTCCGTCTTA 59.568 50.000 0.00 0.00 44.51 2.10
510 511 1.208776 CCCCGGTTTTATCTCCGTCTT 59.791 52.381 0.00 0.00 44.51 3.01
511 512 0.828677 CCCCGGTTTTATCTCCGTCT 59.171 55.000 0.00 0.00 44.51 4.18
512 513 0.812811 GCCCCGGTTTTATCTCCGTC 60.813 60.000 0.00 0.00 44.51 4.79
513 514 1.222661 GCCCCGGTTTTATCTCCGT 59.777 57.895 0.00 0.00 44.51 4.69
514 515 1.525306 GGCCCCGGTTTTATCTCCG 60.525 63.158 0.00 0.00 45.42 4.63
515 516 1.152819 GGGCCCCGGTTTTATCTCC 60.153 63.158 12.23 0.00 0.00 3.71
516 517 1.525306 CGGGCCCCGGTTTTATCTC 60.525 63.158 16.39 0.00 44.15 2.75
517 518 2.593420 CGGGCCCCGGTTTTATCT 59.407 61.111 16.39 0.00 44.15 1.98
527 528 2.045731 TGAAATCGAACGGGCCCC 60.046 61.111 18.66 0.08 0.00 5.80
528 529 1.078708 TCTGAAATCGAACGGGCCC 60.079 57.895 13.57 13.57 0.00 5.80
529 530 1.366854 GGTCTGAAATCGAACGGGCC 61.367 60.000 0.00 0.00 0.00 5.80
530 531 1.366854 GGGTCTGAAATCGAACGGGC 61.367 60.000 0.00 0.00 0.00 6.13
531 532 1.082117 CGGGTCTGAAATCGAACGGG 61.082 60.000 0.00 0.00 0.00 5.28
532 533 0.108992 TCGGGTCTGAAATCGAACGG 60.109 55.000 0.00 0.00 0.00 4.44
533 534 1.705256 TTCGGGTCTGAAATCGAACG 58.295 50.000 0.00 0.00 36.83 3.95
534 535 3.802685 CCTATTCGGGTCTGAAATCGAAC 59.197 47.826 11.27 0.00 42.97 3.95
535 536 3.740141 GCCTATTCGGGTCTGAAATCGAA 60.740 47.826 11.38 11.38 44.02 3.71
536 537 2.223971 GCCTATTCGGGTCTGAAATCGA 60.224 50.000 0.00 0.00 0.00 3.59
537 538 2.135933 GCCTATTCGGGTCTGAAATCG 58.864 52.381 0.00 0.00 0.00 3.34
538 539 3.194005 TGCCTATTCGGGTCTGAAATC 57.806 47.619 0.00 0.00 0.00 2.17
539 540 3.545703 CTTGCCTATTCGGGTCTGAAAT 58.454 45.455 0.00 0.00 0.00 2.17
540 541 2.939640 GCTTGCCTATTCGGGTCTGAAA 60.940 50.000 0.00 0.00 0.00 2.69
541 542 1.406887 GCTTGCCTATTCGGGTCTGAA 60.407 52.381 0.00 0.00 0.00 3.02
542 543 0.178068 GCTTGCCTATTCGGGTCTGA 59.822 55.000 0.00 0.00 0.00 3.27
543 544 0.815615 GGCTTGCCTATTCGGGTCTG 60.816 60.000 4.11 0.00 0.00 3.51
544 545 1.271840 TGGCTTGCCTATTCGGGTCT 61.272 55.000 13.18 0.00 0.00 3.85
545 546 1.095807 GTGGCTTGCCTATTCGGGTC 61.096 60.000 13.18 0.00 0.00 4.46
546 547 1.077716 GTGGCTTGCCTATTCGGGT 60.078 57.895 13.18 0.00 0.00 5.28
547 548 2.180204 CGTGGCTTGCCTATTCGGG 61.180 63.158 13.18 0.00 0.00 5.14
548 549 2.180204 CCGTGGCTTGCCTATTCGG 61.180 63.158 13.18 15.62 0.00 4.30
549 550 2.823829 GCCGTGGCTTGCCTATTCG 61.824 63.158 13.18 11.33 38.26 3.34
550 551 2.481471 GGCCGTGGCTTGCCTATTC 61.481 63.158 11.25 0.37 44.46 1.75
551 552 2.440247 GGCCGTGGCTTGCCTATT 60.440 61.111 11.25 0.00 44.46 1.73
556 557 3.211963 CCTATGGCCGTGGCTTGC 61.212 66.667 8.05 0.00 41.60 4.01
557 558 3.211963 GCCTATGGCCGTGGCTTG 61.212 66.667 23.50 5.20 44.06 4.01
566 567 0.596577 TAGATGACGACGCCTATGGC 59.403 55.000 0.00 0.00 46.75 4.40
567 568 1.880675 ACTAGATGACGACGCCTATGG 59.119 52.381 0.00 0.00 0.00 2.74
568 569 3.125487 CCTACTAGATGACGACGCCTATG 59.875 52.174 0.00 0.00 0.00 2.23
569 570 3.244491 ACCTACTAGATGACGACGCCTAT 60.244 47.826 0.00 0.00 0.00 2.57
570 571 2.103771 ACCTACTAGATGACGACGCCTA 59.896 50.000 0.00 0.00 0.00 3.93
571 572 1.134159 ACCTACTAGATGACGACGCCT 60.134 52.381 0.00 0.00 0.00 5.52
572 573 1.307097 ACCTACTAGATGACGACGCC 58.693 55.000 0.00 0.00 0.00 5.68
573 574 2.096318 GCTACCTACTAGATGACGACGC 60.096 54.545 0.00 0.00 0.00 5.19
574 575 3.129109 TGCTACCTACTAGATGACGACG 58.871 50.000 0.00 0.00 0.00 5.12
575 576 5.008811 ACAATGCTACCTACTAGATGACGAC 59.991 44.000 0.00 0.00 0.00 4.34
576 577 5.131067 ACAATGCTACCTACTAGATGACGA 58.869 41.667 0.00 0.00 0.00 4.20
577 578 5.440234 ACAATGCTACCTACTAGATGACG 57.560 43.478 0.00 0.00 0.00 4.35
578 579 9.595823 TTAAAACAATGCTACCTACTAGATGAC 57.404 33.333 0.00 0.00 0.00 3.06
624 625 2.570181 CGCCGTTACTCCGAGGTT 59.430 61.111 0.00 0.00 0.00 3.50
654 660 2.052468 AGGTAGGGACGACACCTTTTT 58.948 47.619 0.00 0.00 39.73 1.94
655 661 1.725803 AGGTAGGGACGACACCTTTT 58.274 50.000 0.00 0.00 39.73 2.27
659 665 1.595357 CCAAGGTAGGGACGACACC 59.405 63.158 0.00 0.00 35.02 4.16
668 674 2.590092 CTTCGGCCCCAAGGTAGG 59.410 66.667 0.00 0.00 34.57 3.18
680 686 3.330853 GCGCACGATAGGCTTCGG 61.331 66.667 18.46 11.13 43.33 4.30
681 687 3.682315 CGCGCACGATAGGCTTCG 61.682 66.667 8.75 14.56 43.93 3.79
694 705 3.386867 CTTGTCCATCTTGCCGCGC 62.387 63.158 0.00 0.00 0.00 6.86
702 713 0.035056 CGGCCTTTCCTTGTCCATCT 60.035 55.000 0.00 0.00 0.00 2.90
704 715 1.678970 GCGGCCTTTCCTTGTCCAT 60.679 57.895 0.00 0.00 0.00 3.41
777 788 2.016704 GGGCAGATGACGCGTATCG 61.017 63.158 13.97 12.39 45.38 2.92
778 789 1.067416 TGGGCAGATGACGCGTATC 59.933 57.895 13.97 15.44 0.00 2.24
802 814 0.596082 GTGTGTGAAACGGAATGGGG 59.404 55.000 0.00 0.00 42.39 4.96
808 820 0.179067 GGAGGTGTGTGTGAAACGGA 60.179 55.000 0.00 0.00 42.39 4.69
819 831 1.604378 GAGTGGGATGGGAGGTGTG 59.396 63.158 0.00 0.00 0.00 3.82
820 832 1.616628 GGAGTGGGATGGGAGGTGT 60.617 63.158 0.00 0.00 0.00 4.16
822 834 2.042930 GGGAGTGGGATGGGAGGT 59.957 66.667 0.00 0.00 0.00 3.85
824 836 2.365635 ACGGGAGTGGGATGGGAG 60.366 66.667 0.00 0.00 44.82 4.30
860 873 0.974383 GCTGTATATGTAGCGGGGGT 59.026 55.000 0.00 0.00 0.00 4.95
898 911 3.958860 GAGGGCTGGTGCTGGTGT 61.959 66.667 0.00 0.00 39.59 4.16
903 917 1.075659 GAAAAGGAGGGCTGGTGCT 59.924 57.895 0.00 0.00 39.59 4.40
913 927 5.748152 TGTTTGAAAGCGATTTGAAAAGGAG 59.252 36.000 12.19 0.00 0.00 3.69
914 928 5.655488 TGTTTGAAAGCGATTTGAAAAGGA 58.345 33.333 12.19 0.00 0.00 3.36
915 929 5.050837 CCTGTTTGAAAGCGATTTGAAAAGG 60.051 40.000 12.19 15.39 0.00 3.11
927 948 3.300009 CGATGTGTTCCTGTTTGAAAGC 58.700 45.455 0.00 0.00 0.00 3.51
938 959 3.195698 GAGGCGGCGATGTGTTCC 61.196 66.667 12.98 0.00 0.00 3.62
939 960 3.195698 GGAGGCGGCGATGTGTTC 61.196 66.667 12.98 0.00 0.00 3.18
958 979 3.157949 GAGCGGAGGAAGGGGAGG 61.158 72.222 0.00 0.00 0.00 4.30
959 980 3.157949 GGAGCGGAGGAAGGGGAG 61.158 72.222 0.00 0.00 0.00 4.30
960 981 4.798682 GGGAGCGGAGGAAGGGGA 62.799 72.222 0.00 0.00 0.00 4.81
961 982 4.806339 AGGGAGCGGAGGAAGGGG 62.806 72.222 0.00 0.00 0.00 4.79
962 983 3.157949 GAGGGAGCGGAGGAAGGG 61.158 72.222 0.00 0.00 0.00 3.95
963 984 3.157949 GGAGGGAGCGGAGGAAGG 61.158 72.222 0.00 0.00 0.00 3.46
964 985 3.157949 GGGAGGGAGCGGAGGAAG 61.158 72.222 0.00 0.00 0.00 3.46
965 986 4.798682 GGGGAGGGAGCGGAGGAA 62.799 72.222 0.00 0.00 0.00 3.36
968 989 4.888325 ATGGGGGAGGGAGCGGAG 62.888 72.222 0.00 0.00 0.00 4.63
969 990 4.880426 GATGGGGGAGGGAGCGGA 62.880 72.222 0.00 0.00 0.00 5.54
972 993 2.451294 ATGGATGGGGGAGGGAGC 60.451 66.667 0.00 0.00 0.00 4.70
973 994 1.849823 GGATGGATGGGGGAGGGAG 60.850 68.421 0.00 0.00 0.00 4.30
974 995 2.293934 GGATGGATGGGGGAGGGA 59.706 66.667 0.00 0.00 0.00 4.20
975 996 2.038438 TGGATGGATGGGGGAGGG 60.038 66.667 0.00 0.00 0.00 4.30
978 999 0.028747 ATCACTGGATGGATGGGGGA 60.029 55.000 0.00 0.00 30.86 4.81
1054 1075 3.474570 GGCGGAGAGGAGGTGCAT 61.475 66.667 0.00 0.00 0.00 3.96
1092 1113 3.813143 TATTCGTCGCCGTCGCCA 61.813 61.111 0.00 0.00 35.26 5.69
1097 1118 1.353103 CGGTAGTATTCGTCGCCGT 59.647 57.895 0.00 0.00 35.11 5.68
1100 1121 1.538117 GCAGCGGTAGTATTCGTCGC 61.538 60.000 0.00 0.00 45.72 5.19
1107 1128 1.043116 TCCTGCAGCAGCGGTAGTAT 61.043 55.000 17.81 0.00 45.95 2.12
1313 1334 1.213094 CTGCTGCTGCTTGTTGTTGC 61.213 55.000 17.00 0.00 40.48 4.17
1402 1426 3.430453 TGGCAGGCACTTAATTTAAGCT 58.570 40.909 14.67 3.23 39.39 3.74
1421 1445 2.501723 ACTGGGTACTGACTGCTAATGG 59.498 50.000 0.00 0.00 0.00 3.16
1435 1459 4.897076 TCAACTCAACTCAACTACTGGGTA 59.103 41.667 0.00 0.00 38.00 3.69
1437 1461 4.058817 GTCAACTCAACTCAACTACTGGG 58.941 47.826 0.00 0.00 0.00 4.45
1482 1715 7.094377 TGTTTTTACCTGAAGATGGCTGATAAC 60.094 37.037 0.00 0.00 0.00 1.89
1483 1716 6.945435 TGTTTTTACCTGAAGATGGCTGATAA 59.055 34.615 0.00 0.00 0.00 1.75
1489 1722 5.705905 ACTACTGTTTTTACCTGAAGATGGC 59.294 40.000 0.00 0.00 0.00 4.40
1527 1760 1.135689 GGGTGTGCAAAGCGAAGTATG 60.136 52.381 0.00 0.00 0.00 2.39
1584 1819 6.627087 AGGAATCAAAGATGGACAGTAGAA 57.373 37.500 0.00 0.00 0.00 2.10
1586 1821 5.065731 GCAAGGAATCAAAGATGGACAGTAG 59.934 44.000 0.00 0.00 0.00 2.57
1587 1822 4.943705 GCAAGGAATCAAAGATGGACAGTA 59.056 41.667 0.00 0.00 0.00 2.74
1588 1823 3.760684 GCAAGGAATCAAAGATGGACAGT 59.239 43.478 0.00 0.00 0.00 3.55
1593 1828 4.644103 ATTCGCAAGGAATCAAAGATGG 57.356 40.909 0.00 0.00 41.57 3.51
1595 1830 5.185635 TGGAAATTCGCAAGGAATCAAAGAT 59.814 36.000 0.00 0.00 44.59 2.40
1596 1831 4.522405 TGGAAATTCGCAAGGAATCAAAGA 59.478 37.500 0.00 0.00 44.59 2.52
1600 1835 3.826157 ACTTGGAAATTCGCAAGGAATCA 59.174 39.130 20.26 0.00 44.59 2.57
1601 1836 4.168760 CACTTGGAAATTCGCAAGGAATC 58.831 43.478 20.26 0.00 44.59 2.52
1604 1839 2.582052 ACACTTGGAAATTCGCAAGGA 58.418 42.857 20.26 0.00 32.57 3.36
1605 1840 3.052036 CAACACTTGGAAATTCGCAAGG 58.948 45.455 20.26 14.37 32.57 3.61
1622 1870 6.767524 AATCAGTGGTGTTAAACTTCAACA 57.232 33.333 0.00 0.00 33.61 3.33
1623 1871 7.136772 GGTAATCAGTGGTGTTAAACTTCAAC 58.863 38.462 0.00 0.00 0.00 3.18
1624 1872 6.829298 TGGTAATCAGTGGTGTTAAACTTCAA 59.171 34.615 0.00 0.00 0.00 2.69
1626 1874 6.565247 CGTGGTAATCAGTGGTGTTAAACTTC 60.565 42.308 0.00 0.00 0.00 3.01
1627 1875 5.237779 CGTGGTAATCAGTGGTGTTAAACTT 59.762 40.000 0.00 0.00 0.00 2.66
1628 1876 4.753107 CGTGGTAATCAGTGGTGTTAAACT 59.247 41.667 0.00 0.00 0.00 2.66
1629 1877 4.083696 CCGTGGTAATCAGTGGTGTTAAAC 60.084 45.833 0.00 0.00 0.00 2.01
1630 1878 4.066490 CCGTGGTAATCAGTGGTGTTAAA 58.934 43.478 0.00 0.00 0.00 1.52
1632 1880 2.027929 CCCGTGGTAATCAGTGGTGTTA 60.028 50.000 0.00 0.00 0.00 2.41
1633 1881 1.271163 CCCGTGGTAATCAGTGGTGTT 60.271 52.381 0.00 0.00 0.00 3.32
1634 1882 0.323629 CCCGTGGTAATCAGTGGTGT 59.676 55.000 0.00 0.00 0.00 4.16
1635 1883 0.323629 ACCCGTGGTAATCAGTGGTG 59.676 55.000 0.00 0.00 32.11 4.17
1636 1884 0.323629 CACCCGTGGTAATCAGTGGT 59.676 55.000 0.00 0.00 32.11 4.16
1637 1885 0.392461 CCACCCGTGGTAATCAGTGG 60.392 60.000 5.66 0.00 45.53 4.00
1638 1886 3.153024 CCACCCGTGGTAATCAGTG 57.847 57.895 5.66 0.00 45.53 3.66
1648 1896 0.523072 CAATTTCTCTGCCACCCGTG 59.477 55.000 0.00 0.00 0.00 4.94
1652 1900 2.508526 ACAGTCAATTTCTCTGCCACC 58.491 47.619 0.00 0.00 33.12 4.61
1653 1901 4.569943 TCTACAGTCAATTTCTCTGCCAC 58.430 43.478 0.00 0.00 33.12 5.01
1656 1904 5.121454 CCTGTTCTACAGTCAATTTCTCTGC 59.879 44.000 6.13 0.00 44.50 4.26
1657 1905 5.641209 CCCTGTTCTACAGTCAATTTCTCTG 59.359 44.000 6.13 0.00 44.50 3.35
1658 1906 5.280215 CCCCTGTTCTACAGTCAATTTCTCT 60.280 44.000 6.13 0.00 44.50 3.10
1659 1907 4.938226 CCCCTGTTCTACAGTCAATTTCTC 59.062 45.833 6.13 0.00 44.50 2.87
1660 1908 4.351111 ACCCCTGTTCTACAGTCAATTTCT 59.649 41.667 6.13 0.00 44.50 2.52
1666 1914 2.158370 TCTCACCCCTGTTCTACAGTCA 60.158 50.000 6.13 0.00 44.50 3.41
1698 1946 2.583520 GCTCCCTCTCTGTGCCTG 59.416 66.667 0.00 0.00 0.00 4.85
1699 1947 2.686835 GGCTCCCTCTCTGTGCCT 60.687 66.667 0.00 0.00 40.36 4.75
1700 1948 3.005539 TGGCTCCCTCTCTGTGCC 61.006 66.667 0.00 0.00 43.49 5.01
1701 1949 2.583520 CTGGCTCCCTCTCTGTGC 59.416 66.667 0.00 0.00 0.00 4.57
1702 1950 0.685785 TAGCTGGCTCCCTCTCTGTG 60.686 60.000 0.00 0.00 0.00 3.66
1703 1951 0.041833 TTAGCTGGCTCCCTCTCTGT 59.958 55.000 0.00 0.00 0.00 3.41
1704 1952 0.463620 GTTAGCTGGCTCCCTCTCTG 59.536 60.000 0.00 0.00 0.00 3.35
1722 1983 7.796916 GATTCATTATCATATGGTACCCACCGT 60.797 40.741 10.07 0.00 39.25 4.83
1723 1984 6.538742 GATTCATTATCATATGGTACCCACCG 59.461 42.308 10.07 0.00 39.25 4.94
1724 1985 7.402054 TGATTCATTATCATATGGTACCCACC 58.598 38.462 10.07 0.00 40.67 4.61
1725 1986 8.730680 GTTGATTCATTATCATATGGTACCCAC 58.269 37.037 10.07 0.00 42.69 4.61
1726 1987 7.606073 CGTTGATTCATTATCATATGGTACCCA 59.394 37.037 10.07 0.00 42.69 4.51
1727 1988 7.065803 CCGTTGATTCATTATCATATGGTACCC 59.934 40.741 10.07 0.00 42.69 3.69
1728 1989 7.606456 ACCGTTGATTCATTATCATATGGTACC 59.394 37.037 4.43 4.43 42.69 3.34
1729 1990 8.547967 ACCGTTGATTCATTATCATATGGTAC 57.452 34.615 2.13 0.00 42.69 3.34
1731 1992 9.567776 TTTACCGTTGATTCATTATCATATGGT 57.432 29.630 2.13 0.00 42.69 3.55
1741 2002 9.410556 CTCAAAAGATTTTACCGTTGATTCATT 57.589 29.630 0.00 0.00 0.00 2.57
1742 2003 8.792633 TCTCAAAAGATTTTACCGTTGATTCAT 58.207 29.630 0.00 0.00 0.00 2.57
1743 2004 8.160521 TCTCAAAAGATTTTACCGTTGATTCA 57.839 30.769 0.00 0.00 0.00 2.57
1744 2005 9.065871 CATCTCAAAAGATTTTACCGTTGATTC 57.934 33.333 0.00 0.00 40.38 2.52
1745 2006 8.792633 TCATCTCAAAAGATTTTACCGTTGATT 58.207 29.630 0.00 0.00 40.38 2.57
1746 2007 8.335532 TCATCTCAAAAGATTTTACCGTTGAT 57.664 30.769 0.00 0.00 40.38 2.57
1747 2008 7.737972 TCATCTCAAAAGATTTTACCGTTGA 57.262 32.000 0.00 0.00 40.38 3.18
1748 2009 7.059488 CGTTCATCTCAAAAGATTTTACCGTTG 59.941 37.037 0.00 0.00 40.38 4.10
1749 2010 7.075741 CGTTCATCTCAAAAGATTTTACCGTT 58.924 34.615 0.00 0.00 40.38 4.44
1750 2011 6.348213 CCGTTCATCTCAAAAGATTTTACCGT 60.348 38.462 0.00 0.00 40.38 4.83
1751 2012 6.021596 CCGTTCATCTCAAAAGATTTTACCG 58.978 40.000 0.00 0.00 40.38 4.02
1808 2167 5.185056 CGAAAATCCTGTTCCCCTTTGTATT 59.815 40.000 0.00 0.00 0.00 1.89
1809 2168 4.705023 CGAAAATCCTGTTCCCCTTTGTAT 59.295 41.667 0.00 0.00 0.00 2.29
1810 2169 4.076394 CGAAAATCCTGTTCCCCTTTGTA 58.924 43.478 0.00 0.00 0.00 2.41
1894 2281 8.615211 CGATTTGTTCTTCTTTCCATGATATGA 58.385 33.333 0.00 0.00 0.00 2.15
1936 2323 6.146021 GCAAGTGTCAAATCAAAAGGGTAATG 59.854 38.462 0.00 0.00 0.00 1.90
2008 2396 0.394216 TCACTGGGCACATACATGGC 60.394 55.000 0.00 0.00 44.21 4.40
2053 2449 4.417426 TTAGGTAGGCAGCAATAGGAAC 57.583 45.455 0.00 0.00 0.00 3.62
2110 2527 2.202295 TTTGCCGTTGAAGTCAAAGC 57.798 45.000 9.35 9.35 37.63 3.51
2128 2545 1.300697 GGTCAGCGTCGGTGTCTTT 60.301 57.895 22.58 0.00 32.43 2.52
2148 2565 3.311871 GTCAAAGTCGACGGCTCTATCTA 59.688 47.826 10.46 0.00 0.00 1.98
2149 2566 2.097791 GTCAAAGTCGACGGCTCTATCT 59.902 50.000 10.46 0.00 0.00 1.98
2150 2567 2.159421 TGTCAAAGTCGACGGCTCTATC 60.159 50.000 10.46 0.00 38.84 2.08
2151 2568 1.816835 TGTCAAAGTCGACGGCTCTAT 59.183 47.619 10.46 0.00 38.84 1.98
2152 2569 1.199327 CTGTCAAAGTCGACGGCTCTA 59.801 52.381 10.46 0.00 38.84 2.43
2158 2575 2.460918 AGTCAACTGTCAAAGTCGACG 58.539 47.619 10.46 0.00 45.87 5.12
2213 2636 0.543749 GGTCATCCCCAGAACAGAGG 59.456 60.000 0.00 0.00 0.00 3.69
2224 2647 4.337555 CACTCTTTTCATCATGGTCATCCC 59.662 45.833 0.00 0.00 0.00 3.85
2237 2660 6.321945 TGGTACTACACTGTACACTCTTTTCA 59.678 38.462 0.00 0.00 43.17 2.69
2241 2664 6.720112 TTTGGTACTACACTGTACACTCTT 57.280 37.500 0.00 0.00 43.17 2.85
2244 2667 6.224665 TGTTTTGGTACTACACTGTACACT 57.775 37.500 0.00 0.00 43.17 3.55
2245 2668 5.464389 CCTGTTTTGGTACTACACTGTACAC 59.536 44.000 0.00 0.00 43.17 2.90
2246 2669 5.129155 ACCTGTTTTGGTACTACACTGTACA 59.871 40.000 0.00 0.00 43.17 2.90
2248 2671 5.874897 ACCTGTTTTGGTACTACACTGTA 57.125 39.130 0.00 0.00 38.79 2.74
2249 2672 4.765813 ACCTGTTTTGGTACTACACTGT 57.234 40.909 0.00 0.00 38.79 3.55
2251 2674 5.129815 TCTGAACCTGTTTTGGTACTACACT 59.870 40.000 0.00 0.00 39.83 3.55
2252 2675 5.362263 TCTGAACCTGTTTTGGTACTACAC 58.638 41.667 0.00 0.00 39.83 2.90
2254 2677 6.285990 TCTTCTGAACCTGTTTTGGTACTAC 58.714 40.000 0.00 0.00 39.83 2.73
2255 2678 6.488769 TCTTCTGAACCTGTTTTGGTACTA 57.511 37.500 0.00 0.00 39.83 1.82
2258 2681 5.070001 CCATCTTCTGAACCTGTTTTGGTA 58.930 41.667 0.00 0.00 39.83 3.25
2259 2682 3.891366 CCATCTTCTGAACCTGTTTTGGT 59.109 43.478 0.00 0.00 43.11 3.67
2260 2683 4.144297 TCCATCTTCTGAACCTGTTTTGG 58.856 43.478 0.00 0.00 0.00 3.28
2261 2684 5.474532 TCATCCATCTTCTGAACCTGTTTTG 59.525 40.000 0.00 0.00 0.00 2.44
2326 2779 9.602568 GCTGATGAGATGATTCTATTCATATGT 57.397 33.333 1.90 0.00 36.48 2.29
2341 2794 8.837389 TGAAGAATAAAATCAGCTGATGAGATG 58.163 33.333 29.34 0.00 42.53 2.90
2342 2795 8.975663 TGAAGAATAAAATCAGCTGATGAGAT 57.024 30.769 29.34 18.45 42.53 2.75
2343 2796 8.797350 TTGAAGAATAAAATCAGCTGATGAGA 57.203 30.769 29.34 17.07 42.53 3.27
2347 2800 9.813446 GGAATTTGAAGAATAAAATCAGCTGAT 57.187 29.630 23.75 23.75 36.07 2.90
2348 2801 8.253113 GGGAATTTGAAGAATAAAATCAGCTGA 58.747 33.333 20.79 20.79 0.00 4.26
2349 2802 7.493645 GGGGAATTTGAAGAATAAAATCAGCTG 59.506 37.037 7.63 7.63 0.00 4.24
2350 2803 7.559486 GGGGAATTTGAAGAATAAAATCAGCT 58.441 34.615 0.00 0.00 0.00 4.24
2351 2804 6.476706 CGGGGAATTTGAAGAATAAAATCAGC 59.523 38.462 0.00 0.00 0.00 4.26
2352 2805 7.547227 ACGGGGAATTTGAAGAATAAAATCAG 58.453 34.615 0.00 0.00 0.00 2.90
2353 2806 7.475137 ACGGGGAATTTGAAGAATAAAATCA 57.525 32.000 0.00 0.00 0.00 2.57
2354 2807 9.863845 TTTACGGGGAATTTGAAGAATAAAATC 57.136 29.630 0.00 0.00 0.00 2.17
2360 2813 9.869757 CTTTATTTTACGGGGAATTTGAAGAAT 57.130 29.630 0.00 0.00 0.00 2.40
2361 2814 8.308207 CCTTTATTTTACGGGGAATTTGAAGAA 58.692 33.333 0.00 0.00 0.00 2.52
2362 2815 7.093684 CCCTTTATTTTACGGGGAATTTGAAGA 60.094 37.037 0.00 0.00 39.42 2.87
2363 2816 7.039270 CCCTTTATTTTACGGGGAATTTGAAG 58.961 38.462 0.00 0.00 39.42 3.02
2364 2817 6.574662 GCCCTTTATTTTACGGGGAATTTGAA 60.575 38.462 0.00 0.00 39.42 2.69
2365 2818 5.105269 GCCCTTTATTTTACGGGGAATTTGA 60.105 40.000 0.00 0.00 39.42 2.69
2366 2819 5.105106 AGCCCTTTATTTTACGGGGAATTTG 60.105 40.000 0.00 0.00 39.42 2.32
2367 2820 5.027460 AGCCCTTTATTTTACGGGGAATTT 58.973 37.500 0.00 0.00 39.42 1.82
2368 2821 4.404394 CAGCCCTTTATTTTACGGGGAATT 59.596 41.667 0.00 0.00 39.42 2.17
2369 2822 3.958147 CAGCCCTTTATTTTACGGGGAAT 59.042 43.478 0.00 0.00 39.42 3.01
2370 2823 3.245336 ACAGCCCTTTATTTTACGGGGAA 60.245 43.478 0.00 0.00 39.42 3.97
2371 2824 2.309458 ACAGCCCTTTATTTTACGGGGA 59.691 45.455 0.00 0.00 39.42 4.81
2372 2825 2.425668 CACAGCCCTTTATTTTACGGGG 59.574 50.000 0.00 0.00 37.17 5.73
2373 2826 2.159296 GCACAGCCCTTTATTTTACGGG 60.159 50.000 0.00 0.00 39.76 5.28
2374 2827 2.490115 TGCACAGCCCTTTATTTTACGG 59.510 45.455 0.00 0.00 0.00 4.02
2375 2828 3.498082 GTGCACAGCCCTTTATTTTACG 58.502 45.455 13.17 0.00 0.00 3.18
2376 2829 3.189702 TCGTGCACAGCCCTTTATTTTAC 59.810 43.478 18.64 0.00 0.00 2.01
2377 2830 3.413327 TCGTGCACAGCCCTTTATTTTA 58.587 40.909 18.64 0.00 0.00 1.52
2378 2831 2.228822 CTCGTGCACAGCCCTTTATTTT 59.771 45.455 18.64 0.00 0.00 1.82
2379 2832 1.812571 CTCGTGCACAGCCCTTTATTT 59.187 47.619 18.64 0.00 0.00 1.40
2380 2833 1.003118 TCTCGTGCACAGCCCTTTATT 59.997 47.619 18.64 0.00 0.00 1.40
2381 2834 0.613260 TCTCGTGCACAGCCCTTTAT 59.387 50.000 18.64 0.00 0.00 1.40
2382 2835 0.320421 GTCTCGTGCACAGCCCTTTA 60.320 55.000 18.64 0.00 0.00 1.85
2383 2836 1.598130 GTCTCGTGCACAGCCCTTT 60.598 57.895 18.64 0.00 0.00 3.11
2384 2837 2.031163 GTCTCGTGCACAGCCCTT 59.969 61.111 18.64 0.00 0.00 3.95
2385 2838 4.008933 GGTCTCGTGCACAGCCCT 62.009 66.667 18.64 0.00 0.00 5.19
2386 2839 3.537206 AAGGTCTCGTGCACAGCCC 62.537 63.158 18.64 12.41 0.00 5.19
2387 2840 2.029844 GAAGGTCTCGTGCACAGCC 61.030 63.158 18.64 16.39 0.00 4.85
2388 2841 0.880278 TTGAAGGTCTCGTGCACAGC 60.880 55.000 18.64 7.22 0.00 4.40
2389 2842 1.261619 GTTTGAAGGTCTCGTGCACAG 59.738 52.381 18.64 13.22 0.00 3.66
2390 2843 1.295792 GTTTGAAGGTCTCGTGCACA 58.704 50.000 18.64 3.15 0.00 4.57
2391 2844 1.295792 TGTTTGAAGGTCTCGTGCAC 58.704 50.000 6.82 6.82 0.00 4.57
2392 2845 2.031258 TTGTTTGAAGGTCTCGTGCA 57.969 45.000 0.00 0.00 0.00 4.57
2393 2846 3.414549 TTTTGTTTGAAGGTCTCGTGC 57.585 42.857 0.00 0.00 0.00 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.