Multiple sequence alignment - TraesCS4D01G353800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G353800 chr4D 100.000 7805 0 0 1 7805 504086636 504094440 0.000000e+00 14377.0
1 TraesCS4D01G353800 chr4D 80.952 126 16 5 2544 2669 504088772 504088889 8.340000e-15 93.5
2 TraesCS4D01G353800 chr4D 80.952 126 16 5 2137 2254 504089179 504089304 8.340000e-15 93.5
3 TraesCS4D01G353800 chr5A 90.979 4168 237 52 2544 6628 688762436 688766547 0.000000e+00 5485.0
4 TraesCS4D01G353800 chr5A 86.577 1110 57 40 928 2004 688761216 688762266 0.000000e+00 1140.0
5 TraesCS4D01G353800 chr5A 81.503 173 24 3 2357 2521 688762592 688762764 1.370000e-27 135.0
6 TraesCS4D01G353800 chr5A 94.318 88 4 1 4076 4162 134086058 134085971 4.910000e-27 134.0
7 TraesCS4D01G353800 chrUn 99.490 1176 6 0 6630 7805 355949121 355947946 0.000000e+00 2139.0
8 TraesCS4D01G353800 chrUn 92.537 268 18 2 1 267 201674138 201674404 4.420000e-102 383.0
9 TraesCS4D01G353800 chrUn 100.000 38 0 0 2272 2309 198049824 198049861 3.910000e-08 71.3
10 TraesCS4D01G353800 chrUn 100.000 38 0 0 2272 2309 198052333 198052370 3.910000e-08 71.3
11 TraesCS4D01G353800 chr5D 99.238 1181 9 0 6625 7805 555471253 555470073 0.000000e+00 2132.0
12 TraesCS4D01G353800 chr5D 99.071 1184 10 1 6622 7805 485756752 485757934 0.000000e+00 2124.0
13 TraesCS4D01G353800 chr5D 94.480 1105 52 6 6708 7805 525576367 525577469 0.000000e+00 1694.0
14 TraesCS4D01G353800 chr5D 100.000 658 0 0 278 935 7048659 7049316 0.000000e+00 1216.0
15 TraesCS4D01G353800 chr5D 100.000 652 0 0 278 929 7056955 7056304 0.000000e+00 1205.0
16 TraesCS4D01G353800 chr5D 100.000 267 0 0 1 267 7047118 7047384 1.960000e-135 494.0
17 TraesCS4D01G353800 chr5D 100.000 267 0 0 1 267 7058794 7058528 1.960000e-135 494.0
18 TraesCS4D01G353800 chr5D 81.887 265 42 5 1 261 290047193 290046931 1.320000e-52 219.0
19 TraesCS4D01G353800 chr5D 97.701 87 2 0 4076 4162 122198514 122198428 4.880000e-32 150.0
20 TraesCS4D01G353800 chr1D 99.238 1181 9 0 6625 7805 28586940 28585760 0.000000e+00 2132.0
21 TraesCS4D01G353800 chr1D 95.455 88 3 1 4076 4162 78965826 78965913 1.060000e-28 139.0
22 TraesCS4D01G353800 chr4B 92.392 1367 58 27 2522 3874 650684617 650685951 0.000000e+00 1906.0
23 TraesCS4D01G353800 chr4B 89.524 1451 72 28 5239 6628 650687232 650688663 0.000000e+00 1764.0
24 TraesCS4D01G353800 chr4B 86.450 1107 75 34 928 2004 650682926 650683987 0.000000e+00 1144.0
25 TraesCS4D01G353800 chr4B 90.518 791 42 15 4471 5241 650686356 650687133 0.000000e+00 1014.0
26 TraesCS4D01G353800 chr4B 95.833 432 8 8 2100 2524 650684136 650684564 0.000000e+00 689.0
27 TraesCS4D01G353800 chr4B 95.886 316 10 2 4157 4471 650686010 650686323 6.990000e-140 508.0
28 TraesCS4D01G353800 chr4B 89.623 212 22 0 2310 2521 650684766 650684977 3.590000e-68 270.0
29 TraesCS4D01G353800 chr4B 94.382 89 4 1 4072 4159 656162615 656162703 1.370000e-27 135.0
30 TraesCS4D01G353800 chr4B 82.639 144 15 6 2135 2270 650684637 650684778 1.380000e-22 119.0
31 TraesCS4D01G353800 chr4B 90.141 71 7 0 5739 5809 450017151 450017221 8.340000e-15 93.5
32 TraesCS4D01G353800 chr4B 80.469 128 17 5 2544 2669 650684173 650684294 3.000000e-14 91.6
33 TraesCS4D01G353800 chr6B 95.262 1182 46 4 6624 7805 17950710 17949539 0.000000e+00 1864.0
34 TraesCS4D01G353800 chr6B 98.006 652 13 0 278 929 282988274 282987623 0.000000e+00 1133.0
35 TraesCS4D01G353800 chr6B 100.000 267 0 0 1 267 282990111 282989845 1.960000e-135 494.0
36 TraesCS4D01G353800 chr6A 95.105 1185 48 4 6625 7805 53119158 53120336 0.000000e+00 1858.0
37 TraesCS4D01G353800 chr2A 94.635 1193 51 7 6619 7805 83926702 83925517 0.000000e+00 1836.0
38 TraesCS4D01G353800 chr2A 96.491 114 3 1 6625 6738 83921533 83921645 3.720000e-43 187.0
39 TraesCS4D01G353800 chr3B 100.000 929 0 0 1 929 79284464 79285392 0.000000e+00 1679.0
40 TraesCS4D01G353800 chr3B 92.308 52 2 2 2265 2315 660704810 660704860 1.090000e-08 73.1
41 TraesCS4D01G353800 chr3B 95.349 43 0 2 2265 2306 30386161 30386202 5.050000e-07 67.6
42 TraesCS4D01G353800 chr5B 94.357 957 45 3 6849 7805 669976728 669975781 0.000000e+00 1459.0
43 TraesCS4D01G353800 chr5B 97.183 213 6 0 55 267 70788593 70788805 2.070000e-95 361.0
44 TraesCS4D01G353800 chr5B 100.000 63 0 0 1 63 70735623 70735685 4.950000e-22 117.0
45 TraesCS4D01G353800 chr5B 100.000 38 0 0 2272 2309 408065934 408065897 3.910000e-08 71.3
46 TraesCS4D01G353800 chr5B 100.000 38 0 0 2272 2309 408100379 408100342 3.910000e-08 71.3
47 TraesCS4D01G353800 chr7B 99.847 655 1 0 278 932 572394827 572394173 0.000000e+00 1205.0
48 TraesCS4D01G353800 chr7B 100.000 267 0 0 1 267 572396816 572396550 1.960000e-135 494.0
49 TraesCS4D01G353800 chr1B 98.466 652 10 0 278 929 586137609 586138260 0.000000e+00 1149.0
50 TraesCS4D01G353800 chr1B 100.000 267 0 0 1 267 586135770 586136036 1.960000e-135 494.0
51 TraesCS4D01G353800 chr1B 91.837 49 2 2 2263 2310 16863192 16863239 5.050000e-07 67.6
52 TraesCS4D01G353800 chr2B 92.537 268 18 2 1 267 34383939 34384205 4.420000e-102 383.0
53 TraesCS4D01G353800 chr2B 89.157 83 9 0 5739 5821 588268160 588268078 3.850000e-18 104.0
54 TraesCS4D01G353800 chr3D 83.249 197 30 3 1809 2004 421609019 421608825 2.240000e-40 178.0
55 TraesCS4D01G353800 chr3D 91.818 110 5 3 1376 1482 421609333 421609225 4.880000e-32 150.0
56 TraesCS4D01G353800 chr3D 93.407 91 4 2 4070 4159 602205253 602205164 4.910000e-27 134.0
57 TraesCS4D01G353800 chr3D 90.217 92 8 1 1703 1794 421609183 421609093 1.380000e-22 119.0
58 TraesCS4D01G353800 chr7D 92.857 98 4 3 4076 4171 463263157 463263061 1.060000e-28 139.0
59 TraesCS4D01G353800 chr7D 95.349 86 2 2 4076 4160 41146563 41146647 1.370000e-27 135.0
60 TraesCS4D01G353800 chr7A 95.349 86 3 1 4076 4160 40538159 40538244 1.370000e-27 135.0
61 TraesCS4D01G353800 chr4A 93.750 48 0 3 2265 2311 615176906 615176861 1.410000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G353800 chr4D 504086636 504094440 7804 False 14377.000000 14377 100.000000 1 7805 1 chr4D.!!$F1 7804
1 TraesCS4D01G353800 chr5A 688761216 688766547 5331 False 2253.333333 5485 86.353000 928 6628 3 chr5A.!!$F1 5700
2 TraesCS4D01G353800 chrUn 355947946 355949121 1175 True 2139.000000 2139 99.490000 6630 7805 1 chrUn.!!$R1 1175
3 TraesCS4D01G353800 chr5D 555470073 555471253 1180 True 2132.000000 2132 99.238000 6625 7805 1 chr5D.!!$R3 1180
4 TraesCS4D01G353800 chr5D 485756752 485757934 1182 False 2124.000000 2124 99.071000 6622 7805 1 chr5D.!!$F1 1183
5 TraesCS4D01G353800 chr5D 525576367 525577469 1102 False 1694.000000 1694 94.480000 6708 7805 1 chr5D.!!$F2 1097
6 TraesCS4D01G353800 chr5D 7047118 7049316 2198 False 855.000000 1216 100.000000 1 935 2 chr5D.!!$F3 934
7 TraesCS4D01G353800 chr5D 7056304 7058794 2490 True 849.500000 1205 100.000000 1 929 2 chr5D.!!$R4 928
8 TraesCS4D01G353800 chr1D 28585760 28586940 1180 True 2132.000000 2132 99.238000 6625 7805 1 chr1D.!!$R1 1180
9 TraesCS4D01G353800 chr4B 650682926 650688663 5737 False 833.955556 1906 89.259333 928 6628 9 chr4B.!!$F3 5700
10 TraesCS4D01G353800 chr6B 17949539 17950710 1171 True 1864.000000 1864 95.262000 6624 7805 1 chr6B.!!$R1 1181
11 TraesCS4D01G353800 chr6B 282987623 282990111 2488 True 813.500000 1133 99.003000 1 929 2 chr6B.!!$R2 928
12 TraesCS4D01G353800 chr6A 53119158 53120336 1178 False 1858.000000 1858 95.105000 6625 7805 1 chr6A.!!$F1 1180
13 TraesCS4D01G353800 chr2A 83925517 83926702 1185 True 1836.000000 1836 94.635000 6619 7805 1 chr2A.!!$R1 1186
14 TraesCS4D01G353800 chr3B 79284464 79285392 928 False 1679.000000 1679 100.000000 1 929 1 chr3B.!!$F2 928
15 TraesCS4D01G353800 chr5B 669975781 669976728 947 True 1459.000000 1459 94.357000 6849 7805 1 chr5B.!!$R3 956
16 TraesCS4D01G353800 chr7B 572394173 572396816 2643 True 849.500000 1205 99.923500 1 932 2 chr7B.!!$R1 931
17 TraesCS4D01G353800 chr1B 586135770 586138260 2490 False 821.500000 1149 99.233000 1 929 2 chr1B.!!$F2 928

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
985 2698 1.049855 GGGGATGGAATGCATGGCAA 61.050 55.000 0.00 0.00 43.62 4.52 F
1675 3437 0.248702 GCCACGGAATCGAGTCTCTC 60.249 60.000 13.18 0.00 40.11 3.20 F
2509 4834 0.098728 CAATTAAGCGCGGGTTCCTG 59.901 55.000 8.83 0.00 0.00 3.86 F
2744 5069 0.249911 AAGTTTCCTCGTTCGCTGCT 60.250 50.000 0.00 0.00 0.00 4.24 F
2745 5070 0.601558 AGTTTCCTCGTTCGCTGCTA 59.398 50.000 0.00 0.00 0.00 3.49 F
2748 5073 0.815095 TTCCTCGTTCGCTGCTATCA 59.185 50.000 0.00 0.00 0.00 2.15 F
2749 5074 1.032794 TCCTCGTTCGCTGCTATCAT 58.967 50.000 0.00 0.00 0.00 2.45 F
2750 5075 1.135046 CCTCGTTCGCTGCTATCATG 58.865 55.000 0.00 0.00 0.00 3.07 F
4081 6419 1.139058 CACCAGGCACTATGTACTCCC 59.861 57.143 0.00 0.00 36.02 4.30 F
4815 7188 0.039798 GTGTGCACTGTTGATGCCAG 60.040 55.000 19.41 0.00 42.69 4.85 F
6296 8825 0.090676 CGTACAGTAGTGCGCAAACG 59.909 55.000 14.00 12.29 46.20 3.60 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2490 4815 0.098728 CAGGAACCCGCGCTTAATTG 59.901 55.000 5.56 0.00 0.00 2.32 R
2725 5050 0.249911 AGCAGCGAACGAGGAAACTT 60.250 50.000 0.00 0.00 44.43 2.66 R
4070 6408 1.133575 TGGGACGGAGGGAGTACATAG 60.134 57.143 0.00 0.00 0.00 2.23 R
4276 6614 1.442769 GAAGCCTCAGTCGCAAATCA 58.557 50.000 0.00 0.00 0.00 2.57 R
4644 7016 3.118629 AGAGAACTGTCAGCACACAAGAA 60.119 43.478 0.00 0.00 0.00 2.52 R
4652 7024 5.478332 TCTCAGAATTAGAGAACTGTCAGCA 59.522 40.000 0.00 0.00 39.07 4.41 R
4793 7166 1.667756 GGCATCAACAGTGCACACATG 60.668 52.381 21.04 13.97 44.25 3.21 R
4815 7188 0.180406 AGCATCCGGTTGGTGGATAC 59.820 55.000 16.15 0.00 44.41 2.24 R
5110 7497 0.320421 TGACAAGCCCGTGAGCTAAC 60.320 55.000 0.00 0.00 44.11 2.34 R
6389 8927 0.322816 TGTTTCCCAGCTGCATCTCC 60.323 55.000 8.66 0.00 0.00 3.71 R
7572 10149 1.598601 CCAAATGTTTGCAGTTGCCAC 59.401 47.619 1.06 0.00 45.88 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
941 2654 3.198872 GAGGGAGTAGCAAATCCGAAAG 58.801 50.000 0.00 0.00 36.38 2.62
946 2659 5.998363 GGGAGTAGCAAATCCGAAAGATAAT 59.002 40.000 0.00 0.00 36.38 1.28
960 2673 9.601217 TCCGAAAGATAATAAAAGAAGAAGAGG 57.399 33.333 0.00 0.00 0.00 3.69
961 2674 9.601217 CCGAAAGATAATAAAAGAAGAAGAGGA 57.399 33.333 0.00 0.00 0.00 3.71
971 2684 2.158234 AGAAGAAGAGGATAGCGGGGAT 60.158 50.000 0.00 0.00 0.00 3.85
985 2698 1.049855 GGGGATGGAATGCATGGCAA 61.050 55.000 0.00 0.00 43.62 4.52
990 2703 1.153509 GGAATGCATGGCAACCAGC 60.154 57.895 0.00 0.00 43.62 4.85
1120 2840 3.269347 CCGCCCGATTTAGCCACG 61.269 66.667 0.00 0.00 0.00 4.94
1182 2911 2.355310 CGTGGACCAAGCCTATAAACCA 60.355 50.000 0.00 0.00 0.00 3.67
1205 2934 3.884774 GCACTCCACCCCCACACA 61.885 66.667 0.00 0.00 0.00 3.72
1206 2935 2.431683 CACTCCACCCCCACACAG 59.568 66.667 0.00 0.00 0.00 3.66
1208 2937 4.351054 CTCCACCCCCACACAGCC 62.351 72.222 0.00 0.00 0.00 4.85
1224 2953 4.742201 CCCGGCCACTGTCACGAG 62.742 72.222 2.24 0.00 0.00 4.18
1277 3006 4.146075 AGCGAGCAGAGCAGAGCC 62.146 66.667 0.00 0.00 37.01 4.70
1347 3079 2.094957 CGCGAGATATTTCTCCTCTCCC 60.095 54.545 0.00 0.00 44.76 4.30
1354 3086 2.783122 TTTCTCCTCTCCCGTCCGCT 62.783 60.000 0.00 0.00 0.00 5.52
1355 3087 3.213402 CTCCTCTCCCGTCCGCTC 61.213 72.222 0.00 0.00 0.00 5.03
1585 3329 2.484889 GCTCAACCTCGTGAGTTTCTT 58.515 47.619 4.28 0.00 45.75 2.52
1586 3330 2.476997 GCTCAACCTCGTGAGTTTCTTC 59.523 50.000 4.28 0.00 45.75 2.87
1588 3332 4.372656 CTCAACCTCGTGAGTTTCTTCTT 58.627 43.478 0.00 0.00 40.22 2.52
1590 3334 4.809426 TCAACCTCGTGAGTTTCTTCTTTC 59.191 41.667 0.00 0.00 0.00 2.62
1591 3335 4.402056 ACCTCGTGAGTTTCTTCTTTCA 57.598 40.909 0.00 0.00 0.00 2.69
1592 3336 4.766375 ACCTCGTGAGTTTCTTCTTTCAA 58.234 39.130 0.00 0.00 0.00 2.69
1593 3337 4.571176 ACCTCGTGAGTTTCTTCTTTCAAC 59.429 41.667 0.00 0.00 0.00 3.18
1594 3338 4.024809 CCTCGTGAGTTTCTTCTTTCAACC 60.025 45.833 0.00 0.00 0.00 3.77
1595 3339 4.509616 TCGTGAGTTTCTTCTTTCAACCA 58.490 39.130 0.00 0.00 0.00 3.67
1596 3340 4.331717 TCGTGAGTTTCTTCTTTCAACCAC 59.668 41.667 0.00 0.00 0.00 4.16
1597 3341 4.495844 CGTGAGTTTCTTCTTTCAACCACC 60.496 45.833 0.00 0.00 0.00 4.61
1598 3342 4.640647 GTGAGTTTCTTCTTTCAACCACCT 59.359 41.667 0.00 0.00 0.00 4.00
1599 3343 4.881850 TGAGTTTCTTCTTTCAACCACCTC 59.118 41.667 0.00 0.00 0.00 3.85
1600 3344 5.117406 AGTTTCTTCTTTCAACCACCTCT 57.883 39.130 0.00 0.00 0.00 3.69
1601 3345 5.126779 AGTTTCTTCTTTCAACCACCTCTC 58.873 41.667 0.00 0.00 0.00 3.20
1602 3346 3.771577 TCTTCTTTCAACCACCTCTCC 57.228 47.619 0.00 0.00 0.00 3.71
1605 3349 1.068121 CTTTCAACCACCTCTCCCCT 58.932 55.000 0.00 0.00 0.00 4.79
1627 3371 1.457346 GCGGATCCCATTCATCCATC 58.543 55.000 6.06 0.00 40.09 3.51
1639 3383 7.725397 TCCCATTCATCCATCTATTTCGATTTT 59.275 33.333 0.00 0.00 0.00 1.82
1641 3385 7.811236 CCATTCATCCATCTATTTCGATTTTGG 59.189 37.037 0.00 0.00 0.00 3.28
1675 3437 0.248702 GCCACGGAATCGAGTCTCTC 60.249 60.000 13.18 0.00 40.11 3.20
1746 3509 2.317609 CCGCTCCAACACCGTCAAG 61.318 63.158 0.00 0.00 0.00 3.02
1749 3512 1.228657 GCTCCAACACCGTCAAGACC 61.229 60.000 0.00 0.00 0.00 3.85
1953 3729 2.167487 GGAGCAGGTAGGTGAAGAGAAG 59.833 54.545 0.00 0.00 0.00 2.85
1986 3762 4.023279 TCCATGACCGATTCACAGTTTTTG 60.023 41.667 0.00 0.00 36.92 2.44
2016 3829 2.223144 TGCGTGTCTAGTTGCATTTCAC 59.777 45.455 0.00 0.00 31.31 3.18
2068 3915 1.035139 CCTTGCTGCCCCATTCATAC 58.965 55.000 0.00 0.00 0.00 2.39
2074 3921 2.694628 GCTGCCCCATTCATACAAATGA 59.305 45.455 0.00 0.00 40.43 2.57
2083 3930 6.460537 CCCATTCATACAAATGACACCATCAG 60.461 42.308 0.00 0.00 41.87 2.90
2172 4019 5.242615 GGGCATTTTATCATCTTCTTCTCCC 59.757 44.000 0.00 0.00 0.00 4.30
2177 4024 9.061435 CATTTTATCATCTTCTTCTCCCTTACC 57.939 37.037 0.00 0.00 0.00 2.85
2178 4025 7.996758 TTTATCATCTTCTTCTCCCTTACCT 57.003 36.000 0.00 0.00 0.00 3.08
2179 4026 7.996758 TTATCATCTTCTTCTCCCTTACCTT 57.003 36.000 0.00 0.00 0.00 3.50
2180 4027 6.899892 ATCATCTTCTTCTCCCTTACCTTT 57.100 37.500 0.00 0.00 0.00 3.11
2181 4028 7.996758 ATCATCTTCTTCTCCCTTACCTTTA 57.003 36.000 0.00 0.00 0.00 1.85
2225 4546 6.091305 CGACAGCTCATTCATCTGACTTTTTA 59.909 38.462 0.00 0.00 0.00 1.52
2239 4560 7.224297 TCTGACTTTTTAGCATGTCTAACCTT 58.776 34.615 8.52 0.00 37.02 3.50
2248 4569 3.942115 GCATGTCTAACCTTCCCTTCTTC 59.058 47.826 0.00 0.00 0.00 2.87
2254 4575 1.268066 ACCTTCCCTTCTTCGAGACC 58.732 55.000 0.00 0.00 0.00 3.85
2257 4578 2.419297 CCTTCCCTTCTTCGAGACCATG 60.419 54.545 0.00 0.00 0.00 3.66
2258 4579 2.231716 TCCCTTCTTCGAGACCATGA 57.768 50.000 0.00 0.00 0.00 3.07
2259 4580 2.103373 TCCCTTCTTCGAGACCATGAG 58.897 52.381 0.00 0.00 0.00 2.90
2260 4581 1.827969 CCCTTCTTCGAGACCATGAGT 59.172 52.381 0.00 0.00 0.00 3.41
2261 4582 2.417924 CCCTTCTTCGAGACCATGAGTG 60.418 54.545 0.00 0.00 0.00 3.51
2262 4583 2.266554 CTTCTTCGAGACCATGAGTGC 58.733 52.381 0.00 0.00 0.00 4.40
2263 4584 1.550327 TCTTCGAGACCATGAGTGCT 58.450 50.000 0.00 0.00 0.00 4.40
2264 4585 1.895798 TCTTCGAGACCATGAGTGCTT 59.104 47.619 0.00 0.00 0.00 3.91
2265 4586 2.094494 TCTTCGAGACCATGAGTGCTTC 60.094 50.000 0.00 0.00 0.00 3.86
2266 4587 1.256812 TCGAGACCATGAGTGCTTCA 58.743 50.000 0.00 0.00 40.85 3.02
2267 4588 1.618343 TCGAGACCATGAGTGCTTCAA 59.382 47.619 0.00 0.00 39.77 2.69
2268 4589 1.728971 CGAGACCATGAGTGCTTCAAC 59.271 52.381 0.00 0.00 39.77 3.18
2269 4590 2.771089 GAGACCATGAGTGCTTCAACA 58.229 47.619 0.00 0.00 39.77 3.33
2270 4591 3.341823 GAGACCATGAGTGCTTCAACAT 58.658 45.455 0.00 0.00 39.77 2.71
2271 4592 3.341823 AGACCATGAGTGCTTCAACATC 58.658 45.455 0.00 0.00 39.77 3.06
2272 4593 3.076621 GACCATGAGTGCTTCAACATCA 58.923 45.455 0.00 0.00 39.77 3.07
2273 4594 3.079578 ACCATGAGTGCTTCAACATCAG 58.920 45.455 0.00 0.00 39.77 2.90
2274 4595 3.244665 ACCATGAGTGCTTCAACATCAGA 60.245 43.478 0.00 0.00 39.77 3.27
2275 4596 3.374367 CCATGAGTGCTTCAACATCAGAG 59.626 47.826 0.00 0.00 39.77 3.35
2276 4597 3.049708 TGAGTGCTTCAACATCAGAGG 57.950 47.619 0.00 0.00 31.34 3.69
2277 4598 1.736681 GAGTGCTTCAACATCAGAGGC 59.263 52.381 0.00 0.00 38.44 4.70
2278 4599 0.807496 GTGCTTCAACATCAGAGGCC 59.193 55.000 0.00 0.00 37.30 5.19
2279 4600 0.674581 TGCTTCAACATCAGAGGCCG 60.675 55.000 0.00 0.00 37.30 6.13
2280 4601 1.372087 GCTTCAACATCAGAGGCCGG 61.372 60.000 0.00 0.00 32.56 6.13
2281 4602 0.745845 CTTCAACATCAGAGGCCGGG 60.746 60.000 2.18 0.00 0.00 5.73
2282 4603 2.124570 CAACATCAGAGGCCGGGG 60.125 66.667 2.18 0.00 0.00 5.73
2283 4604 3.411517 AACATCAGAGGCCGGGGG 61.412 66.667 2.18 0.00 0.00 5.40
2284 4605 4.741239 ACATCAGAGGCCGGGGGT 62.741 66.667 2.18 0.00 0.00 4.95
2285 4606 2.445845 CATCAGAGGCCGGGGGTA 60.446 66.667 2.18 0.00 0.00 3.69
2286 4607 2.070039 CATCAGAGGCCGGGGGTAA 61.070 63.158 2.18 0.00 0.00 2.85
2287 4608 1.073706 ATCAGAGGCCGGGGGTAAT 60.074 57.895 2.18 0.00 0.00 1.89
2288 4609 1.128188 ATCAGAGGCCGGGGGTAATC 61.128 60.000 2.18 0.00 0.00 1.75
2289 4610 2.447959 AGAGGCCGGGGGTAATCC 60.448 66.667 2.18 0.00 0.00 3.01
2290 4611 2.447959 GAGGCCGGGGGTAATCCT 60.448 66.667 2.18 0.00 35.33 3.24
2291 4612 2.447959 AGGCCGGGGGTAATCCTC 60.448 66.667 2.18 0.00 35.33 3.71
2347 4668 5.891198 TGGCCTTGTCCATTATGCTATATT 58.109 37.500 3.32 0.00 0.00 1.28
2394 4715 1.003116 CCTCGTTTGCTGCTATCATGC 60.003 52.381 0.00 0.00 0.00 4.06
2395 4716 1.938577 CTCGTTTGCTGCTATCATGCT 59.061 47.619 0.00 0.00 0.00 3.79
2409 4734 7.475015 TGCTATCATGCTGTTCTGTTTAATTC 58.525 34.615 0.00 0.00 0.00 2.17
2411 4736 7.642978 GCTATCATGCTGTTCTGTTTAATTCTG 59.357 37.037 0.00 0.00 0.00 3.02
2419 4744 9.118236 GCTGTTCTGTTTAATTCTGTTCATTAC 57.882 33.333 0.00 0.00 0.00 1.89
2433 4758 9.647797 TTCTGTTCATTACGTTGTACATAATCT 57.352 29.630 0.00 0.00 0.00 2.40
2434 4759 9.647797 TCTGTTCATTACGTTGTACATAATCTT 57.352 29.630 0.00 0.00 0.00 2.40
2438 4763 9.872721 TTCATTACGTTGTACATAATCTTACCA 57.127 29.630 0.00 0.00 0.00 3.25
2457 4782 9.815306 TCTTACCATATAGAAAGCTCTGATACT 57.185 33.333 0.00 0.00 32.70 2.12
2485 4810 9.905713 ATTAGTCAATATTTGCTTACCTTCAGA 57.094 29.630 0.00 0.00 0.00 3.27
2486 4811 9.905713 TTAGTCAATATTTGCTTACCTTCAGAT 57.094 29.630 0.00 0.00 0.00 2.90
2487 4812 8.443953 AGTCAATATTTGCTTACCTTCAGATC 57.556 34.615 0.00 0.00 0.00 2.75
2488 4813 8.049117 AGTCAATATTTGCTTACCTTCAGATCA 58.951 33.333 0.00 0.00 0.00 2.92
2489 4814 8.125448 GTCAATATTTGCTTACCTTCAGATCAC 58.875 37.037 0.00 0.00 0.00 3.06
2490 4815 7.283127 TCAATATTTGCTTACCTTCAGATCACC 59.717 37.037 0.00 0.00 0.00 4.02
2491 4816 4.365514 TTTGCTTACCTTCAGATCACCA 57.634 40.909 0.00 0.00 0.00 4.17
2492 4817 4.365514 TTGCTTACCTTCAGATCACCAA 57.634 40.909 0.00 0.00 0.00 3.67
2493 4818 4.574674 TGCTTACCTTCAGATCACCAAT 57.425 40.909 0.00 0.00 0.00 3.16
2494 4819 4.922206 TGCTTACCTTCAGATCACCAATT 58.078 39.130 0.00 0.00 0.00 2.32
2495 4820 6.061022 TGCTTACCTTCAGATCACCAATTA 57.939 37.500 0.00 0.00 0.00 1.40
2496 4821 6.480763 TGCTTACCTTCAGATCACCAATTAA 58.519 36.000 0.00 0.00 0.00 1.40
2497 4822 6.599244 TGCTTACCTTCAGATCACCAATTAAG 59.401 38.462 0.00 0.00 0.00 1.85
2498 4823 6.458888 GCTTACCTTCAGATCACCAATTAAGC 60.459 42.308 0.00 3.21 33.20 3.09
2499 4824 3.941483 ACCTTCAGATCACCAATTAAGCG 59.059 43.478 0.00 0.00 0.00 4.68
2500 4825 3.242870 CCTTCAGATCACCAATTAAGCGC 60.243 47.826 0.00 0.00 0.00 5.92
2501 4826 1.933181 TCAGATCACCAATTAAGCGCG 59.067 47.619 0.00 0.00 0.00 6.86
2502 4827 1.003545 CAGATCACCAATTAAGCGCGG 60.004 52.381 8.83 0.00 0.00 6.46
2503 4828 0.307760 GATCACCAATTAAGCGCGGG 59.692 55.000 8.83 0.00 0.00 6.13
2504 4829 0.393808 ATCACCAATTAAGCGCGGGT 60.394 50.000 8.83 0.72 0.00 5.28
2505 4830 0.606944 TCACCAATTAAGCGCGGGTT 60.607 50.000 8.83 3.03 0.00 4.11
2506 4831 0.179174 CACCAATTAAGCGCGGGTTC 60.179 55.000 8.83 0.00 0.00 3.62
2507 4832 1.310216 ACCAATTAAGCGCGGGTTCC 61.310 55.000 8.83 0.00 0.00 3.62
2508 4833 1.029947 CCAATTAAGCGCGGGTTCCT 61.030 55.000 8.83 0.00 0.00 3.36
2509 4834 0.098728 CAATTAAGCGCGGGTTCCTG 59.901 55.000 8.83 0.00 0.00 3.86
2510 4835 1.654023 AATTAAGCGCGGGTTCCTGC 61.654 55.000 8.83 12.20 0.00 4.85
2511 4836 2.813226 ATTAAGCGCGGGTTCCTGCA 62.813 55.000 20.55 3.16 0.00 4.41
2512 4837 3.538785 TAAGCGCGGGTTCCTGCAA 62.539 57.895 20.55 2.44 0.00 4.08
2513 4838 2.813226 TAAGCGCGGGTTCCTGCAAT 62.813 55.000 20.55 9.50 0.00 3.56
2514 4839 2.813226 AAGCGCGGGTTCCTGCAATA 62.813 55.000 20.55 0.00 0.00 1.90
2515 4840 2.186826 GCGCGGGTTCCTGCAATAT 61.187 57.895 20.55 0.00 0.00 1.28
2516 4841 1.941812 CGCGGGTTCCTGCAATATC 59.058 57.895 20.55 0.00 0.00 1.63
2517 4842 0.532862 CGCGGGTTCCTGCAATATCT 60.533 55.000 20.55 0.00 0.00 1.98
2518 4843 1.680338 GCGGGTTCCTGCAATATCTT 58.320 50.000 16.69 0.00 0.00 2.40
2519 4844 2.805295 CGCGGGTTCCTGCAATATCTTA 60.805 50.000 20.55 0.00 0.00 2.10
2520 4845 3.412386 GCGGGTTCCTGCAATATCTTAT 58.588 45.455 16.69 0.00 0.00 1.73
2521 4846 4.575885 GCGGGTTCCTGCAATATCTTATA 58.424 43.478 16.69 0.00 0.00 0.98
2522 4847 4.392138 GCGGGTTCCTGCAATATCTTATAC 59.608 45.833 16.69 0.00 0.00 1.47
2523 4848 5.794894 CGGGTTCCTGCAATATCTTATACT 58.205 41.667 0.00 0.00 0.00 2.12
2524 4849 6.573680 GCGGGTTCCTGCAATATCTTATACTA 60.574 42.308 16.69 0.00 0.00 1.82
2525 4850 7.383687 CGGGTTCCTGCAATATCTTATACTAA 58.616 38.462 0.00 0.00 0.00 2.24
2526 4851 8.041323 CGGGTTCCTGCAATATCTTATACTAAT 58.959 37.037 0.00 0.00 0.00 1.73
2527 4852 9.740710 GGGTTCCTGCAATATCTTATACTAATT 57.259 33.333 0.00 0.00 0.00 1.40
2552 4877 7.735326 AGTCATAACTAAACACTATCCTGGT 57.265 36.000 0.00 0.00 32.59 4.00
2553 4878 7.556844 AGTCATAACTAAACACTATCCTGGTG 58.443 38.462 0.00 0.00 35.99 4.17
2554 4879 7.180408 AGTCATAACTAAACACTATCCTGGTGT 59.820 37.037 0.00 0.00 40.67 4.16
2555 4880 7.277981 GTCATAACTAAACACTATCCTGGTGTG 59.722 40.741 12.79 12.79 45.64 3.82
2556 4881 5.818678 AACTAAACACTATCCTGGTGTGA 57.181 39.130 18.35 0.00 45.64 3.58
2557 4882 6.374417 AACTAAACACTATCCTGGTGTGAT 57.626 37.500 18.35 8.45 45.64 3.06
2558 4883 5.978814 ACTAAACACTATCCTGGTGTGATC 58.021 41.667 18.35 0.00 45.64 2.92
2559 4884 3.526931 AACACTATCCTGGTGTGATCG 57.473 47.619 18.35 0.00 45.64 3.69
2560 4885 2.457598 ACACTATCCTGGTGTGATCGT 58.542 47.619 18.35 0.00 44.82 3.73
2561 4886 2.832129 ACACTATCCTGGTGTGATCGTT 59.168 45.455 18.35 0.38 44.82 3.85
2562 4887 3.260884 ACACTATCCTGGTGTGATCGTTT 59.739 43.478 18.35 0.00 44.82 3.60
2563 4888 4.253685 CACTATCCTGGTGTGATCGTTTT 58.746 43.478 10.14 0.00 33.95 2.43
2564 4889 5.046878 ACACTATCCTGGTGTGATCGTTTTA 60.047 40.000 18.35 0.00 44.82 1.52
2565 4890 6.049149 CACTATCCTGGTGTGATCGTTTTAT 58.951 40.000 10.14 0.00 33.95 1.40
2566 4891 6.018751 CACTATCCTGGTGTGATCGTTTTATG 60.019 42.308 10.14 0.00 33.95 1.90
2567 4892 3.605634 TCCTGGTGTGATCGTTTTATGG 58.394 45.455 0.00 0.00 0.00 2.74
2568 4893 3.008594 TCCTGGTGTGATCGTTTTATGGT 59.991 43.478 0.00 0.00 0.00 3.55
2569 4894 3.126858 CCTGGTGTGATCGTTTTATGGTG 59.873 47.826 0.00 0.00 0.00 4.17
2570 4895 3.745799 TGGTGTGATCGTTTTATGGTGT 58.254 40.909 0.00 0.00 0.00 4.16
2571 4896 4.138290 TGGTGTGATCGTTTTATGGTGTT 58.862 39.130 0.00 0.00 0.00 3.32
2572 4897 4.214545 TGGTGTGATCGTTTTATGGTGTTC 59.785 41.667 0.00 0.00 0.00 3.18
2573 4898 4.454504 GGTGTGATCGTTTTATGGTGTTCT 59.545 41.667 0.00 0.00 0.00 3.01
2574 4899 5.048991 GGTGTGATCGTTTTATGGTGTTCTT 60.049 40.000 0.00 0.00 0.00 2.52
2575 4900 6.077838 GTGTGATCGTTTTATGGTGTTCTTC 58.922 40.000 0.00 0.00 0.00 2.87
2576 4901 5.995282 TGTGATCGTTTTATGGTGTTCTTCT 59.005 36.000 0.00 0.00 0.00 2.85
2577 4902 6.147164 TGTGATCGTTTTATGGTGTTCTTCTC 59.853 38.462 0.00 0.00 0.00 2.87
2578 4903 5.642063 TGATCGTTTTATGGTGTTCTTCTCC 59.358 40.000 0.00 0.00 0.00 3.71
2579 4904 4.963373 TCGTTTTATGGTGTTCTTCTCCA 58.037 39.130 0.00 0.00 42.73 3.86
2581 4906 6.001460 TCGTTTTATGGTGTTCTTCTCCATT 58.999 36.000 6.72 0.00 44.85 3.16
2582 4907 7.162761 TCGTTTTATGGTGTTCTTCTCCATTA 58.837 34.615 6.72 0.00 44.85 1.90
2583 4908 7.662258 TCGTTTTATGGTGTTCTTCTCCATTAA 59.338 33.333 6.72 2.63 44.85 1.40
2584 4909 8.293867 CGTTTTATGGTGTTCTTCTCCATTAAA 58.706 33.333 6.72 7.53 44.85 1.52
2586 4911 8.934023 TTTATGGTGTTCTTCTCCATTAAACT 57.066 30.769 6.72 0.00 44.85 2.66
2587 4912 8.934023 TTATGGTGTTCTTCTCCATTAAACTT 57.066 30.769 6.72 0.00 44.85 2.66
2588 4913 7.839680 ATGGTGTTCTTCTCCATTAAACTTT 57.160 32.000 0.00 0.00 44.85 2.66
2589 4914 8.934023 ATGGTGTTCTTCTCCATTAAACTTTA 57.066 30.769 0.00 0.00 44.85 1.85
2590 4915 8.934023 TGGTGTTCTTCTCCATTAAACTTTAT 57.066 30.769 0.00 0.00 35.16 1.40
2613 4938 9.813446 TTATACAGTAGACTTTTAGGCTTTAGC 57.187 33.333 0.00 0.00 33.88 3.09
2614 4939 5.169295 ACAGTAGACTTTTAGGCTTTAGCG 58.831 41.667 0.00 0.00 43.26 4.26
2615 4940 5.047519 ACAGTAGACTTTTAGGCTTTAGCGA 60.048 40.000 0.00 0.00 43.26 4.93
2616 4941 5.288952 CAGTAGACTTTTAGGCTTTAGCGAC 59.711 44.000 0.00 0.00 43.26 5.19
2617 4942 4.267349 AGACTTTTAGGCTTTAGCGACA 57.733 40.909 0.00 0.00 43.26 4.35
2618 4943 4.246458 AGACTTTTAGGCTTTAGCGACAG 58.754 43.478 0.00 0.00 43.26 3.51
2619 4944 2.742589 ACTTTTAGGCTTTAGCGACAGC 59.257 45.455 0.00 0.00 43.26 4.40
2620 4945 7.533177 AGACTTTTAGGCTTTAGCGACAGCT 62.533 44.000 4.94 0.00 44.63 4.24
2621 4946 9.906575 TAGACTTTTAGGCTTTAGCGACAGCTC 62.907 44.444 4.94 0.00 42.11 4.09
2631 4956 1.931906 GCGACAGCTCATTCATCTGA 58.068 50.000 0.00 0.00 41.01 3.27
2632 4957 2.481854 GCGACAGCTCATTCATCTGAT 58.518 47.619 0.00 0.00 41.01 2.90
2633 4958 2.871022 GCGACAGCTCATTCATCTGATT 59.129 45.455 0.00 0.00 41.01 2.57
2634 4959 3.311871 GCGACAGCTCATTCATCTGATTT 59.688 43.478 0.00 0.00 41.01 2.17
2635 4960 4.201891 GCGACAGCTCATTCATCTGATTTT 60.202 41.667 0.00 0.00 41.01 1.82
2636 4961 5.675575 GCGACAGCTCATTCATCTGATTTTT 60.676 40.000 0.00 0.00 41.01 1.94
2657 4982 3.876309 TTTGGCATATCTAACCTCCCC 57.124 47.619 0.00 0.00 0.00 4.81
2658 4983 2.815357 TGGCATATCTAACCTCCCCT 57.185 50.000 0.00 0.00 0.00 4.79
2659 4984 3.074857 TGGCATATCTAACCTCCCCTT 57.925 47.619 0.00 0.00 0.00 3.95
2660 4985 2.979678 TGGCATATCTAACCTCCCCTTC 59.020 50.000 0.00 0.00 0.00 3.46
2661 4986 3.252351 GGCATATCTAACCTCCCCTTCT 58.748 50.000 0.00 0.00 0.00 2.85
2662 4987 3.262151 GGCATATCTAACCTCCCCTTCTC 59.738 52.174 0.00 0.00 0.00 2.87
2663 4988 3.056465 GCATATCTAACCTCCCCTTCTCG 60.056 52.174 0.00 0.00 0.00 4.04
2664 4989 2.089600 ATCTAACCTCCCCTTCTCGG 57.910 55.000 0.00 0.00 0.00 4.63
2665 4990 1.005228 TCTAACCTCCCCTTCTCGGA 58.995 55.000 0.00 0.00 33.16 4.55
2666 4991 1.063867 TCTAACCTCCCCTTCTCGGAG 60.064 57.143 0.00 0.00 45.65 4.63
2673 4998 3.399952 TCCCCTTCTCGGAGACTATTT 57.600 47.619 7.33 0.00 33.16 1.40
2674 4999 3.297736 TCCCCTTCTCGGAGACTATTTC 58.702 50.000 7.33 0.00 33.16 2.17
2675 5000 3.031736 CCCCTTCTCGGAGACTATTTCA 58.968 50.000 7.33 0.00 33.16 2.69
2676 5001 3.451178 CCCCTTCTCGGAGACTATTTCAA 59.549 47.826 7.33 0.00 33.16 2.69
2677 5002 4.434520 CCCTTCTCGGAGACTATTTCAAC 58.565 47.826 7.33 0.00 33.16 3.18
2678 5003 4.081642 CCCTTCTCGGAGACTATTTCAACA 60.082 45.833 7.33 0.00 33.16 3.33
2679 5004 5.105752 CCTTCTCGGAGACTATTTCAACAG 58.894 45.833 7.33 0.00 33.16 3.16
2680 5005 4.111375 TCTCGGAGACTATTTCAACAGC 57.889 45.455 2.97 0.00 0.00 4.40
2681 5006 3.764434 TCTCGGAGACTATTTCAACAGCT 59.236 43.478 2.97 0.00 0.00 4.24
2682 5007 3.849911 TCGGAGACTATTTCAACAGCTG 58.150 45.455 13.48 13.48 0.00 4.24
2683 5008 2.932614 CGGAGACTATTTCAACAGCTGG 59.067 50.000 19.93 0.36 0.00 4.85
2684 5009 2.680339 GGAGACTATTTCAACAGCTGGC 59.320 50.000 19.93 0.00 0.00 4.85
2685 5010 2.680339 GAGACTATTTCAACAGCTGGCC 59.320 50.000 19.93 0.00 0.00 5.36
2686 5011 2.307098 AGACTATTTCAACAGCTGGCCT 59.693 45.455 19.93 0.00 0.00 5.19
2687 5012 3.084786 GACTATTTCAACAGCTGGCCTT 58.915 45.455 19.93 0.00 0.00 4.35
2688 5013 2.821969 ACTATTTCAACAGCTGGCCTTG 59.178 45.455 19.93 13.64 0.00 3.61
2689 5014 1.708341 ATTTCAACAGCTGGCCTTGT 58.292 45.000 19.93 3.00 0.00 3.16
2690 5015 1.032014 TTTCAACAGCTGGCCTTGTC 58.968 50.000 19.93 0.00 0.00 3.18
2691 5016 0.823356 TTCAACAGCTGGCCTTGTCC 60.823 55.000 19.93 0.00 0.00 4.02
2692 5017 1.529010 CAACAGCTGGCCTTGTCCA 60.529 57.895 19.93 0.00 34.42 4.02
2693 5018 0.896940 CAACAGCTGGCCTTGTCCAT 60.897 55.000 19.93 0.00 35.22 3.41
2694 5019 0.698238 AACAGCTGGCCTTGTCCATA 59.302 50.000 19.93 0.00 35.22 2.74
2695 5020 0.698238 ACAGCTGGCCTTGTCCATAA 59.302 50.000 19.93 0.00 35.22 1.90
2696 5021 1.285962 ACAGCTGGCCTTGTCCATAAT 59.714 47.619 19.93 0.00 35.22 1.28
2697 5022 1.679680 CAGCTGGCCTTGTCCATAATG 59.320 52.381 5.57 0.00 35.22 1.90
2698 5023 0.386838 GCTGGCCTTGTCCATAATGC 59.613 55.000 3.32 0.00 35.22 3.56
2699 5024 2.025863 GCTGGCCTTGTCCATAATGCT 61.026 52.381 3.32 0.00 35.22 3.79
2700 5025 2.749466 GCTGGCCTTGTCCATAATGCTA 60.749 50.000 3.32 0.00 35.22 3.49
2701 5026 3.759581 CTGGCCTTGTCCATAATGCTAT 58.240 45.455 3.32 0.00 35.22 2.97
2702 5027 4.807303 GCTGGCCTTGTCCATAATGCTATA 60.807 45.833 3.32 0.00 35.22 1.31
2703 5028 5.503927 CTGGCCTTGTCCATAATGCTATAT 58.496 41.667 3.32 0.00 35.22 0.86
2704 5029 5.255687 TGGCCTTGTCCATAATGCTATATG 58.744 41.667 3.32 3.24 33.85 1.78
2705 5030 5.222109 TGGCCTTGTCCATAATGCTATATGT 60.222 40.000 3.32 0.00 32.48 2.29
2706 5031 6.012945 TGGCCTTGTCCATAATGCTATATGTA 60.013 38.462 3.32 0.00 32.48 2.29
2707 5032 6.540189 GGCCTTGTCCATAATGCTATATGTAG 59.460 42.308 0.00 0.00 32.48 2.74
2708 5033 7.106239 GCCTTGTCCATAATGCTATATGTAGT 58.894 38.462 0.00 0.00 32.48 2.73
2709 5034 8.258007 GCCTTGTCCATAATGCTATATGTAGTA 58.742 37.037 0.00 0.00 32.48 1.82
2713 5038 9.185680 TGTCCATAATGCTATATGTAGTATCGT 57.814 33.333 0.72 0.00 32.87 3.73
2716 5041 9.464714 CCATAATGCTATATGTAGTATCGTTCC 57.535 37.037 0.72 0.00 32.87 3.62
2719 5044 6.418585 TGCTATATGTAGTATCGTTCCTCG 57.581 41.667 0.00 0.00 41.41 4.63
2730 5055 3.447918 TCGTTCCTCGACTCAAAGTTT 57.552 42.857 0.00 0.00 44.01 2.66
2731 5056 3.378339 TCGTTCCTCGACTCAAAGTTTC 58.622 45.455 0.00 0.00 44.01 2.78
2732 5057 2.475487 CGTTCCTCGACTCAAAGTTTCC 59.525 50.000 0.00 0.00 42.86 3.13
2733 5058 3.729966 GTTCCTCGACTCAAAGTTTCCT 58.270 45.455 0.00 0.00 0.00 3.36
2734 5059 3.662247 TCCTCGACTCAAAGTTTCCTC 57.338 47.619 0.00 0.00 0.00 3.71
2735 5060 2.030185 TCCTCGACTCAAAGTTTCCTCG 60.030 50.000 0.00 0.00 0.00 4.63
2736 5061 2.288273 CCTCGACTCAAAGTTTCCTCGT 60.288 50.000 6.17 0.00 0.00 4.18
2737 5062 3.381949 CTCGACTCAAAGTTTCCTCGTT 58.618 45.455 6.17 0.00 0.00 3.85
2738 5063 3.378339 TCGACTCAAAGTTTCCTCGTTC 58.622 45.455 6.17 0.00 0.00 3.95
2739 5064 2.153247 CGACTCAAAGTTTCCTCGTTCG 59.847 50.000 0.00 0.00 0.00 3.95
2740 5065 1.865340 ACTCAAAGTTTCCTCGTTCGC 59.135 47.619 0.00 0.00 0.00 4.70
2741 5066 2.135933 CTCAAAGTTTCCTCGTTCGCT 58.864 47.619 0.00 0.00 0.00 4.93
2742 5067 1.864711 TCAAAGTTTCCTCGTTCGCTG 59.135 47.619 0.00 0.00 0.00 5.18
2743 5068 0.586802 AAAGTTTCCTCGTTCGCTGC 59.413 50.000 0.00 0.00 0.00 5.25
2744 5069 0.249911 AAGTTTCCTCGTTCGCTGCT 60.250 50.000 0.00 0.00 0.00 4.24
2745 5070 0.601558 AGTTTCCTCGTTCGCTGCTA 59.398 50.000 0.00 0.00 0.00 3.49
2746 5071 1.204941 AGTTTCCTCGTTCGCTGCTAT 59.795 47.619 0.00 0.00 0.00 2.97
2747 5072 1.588861 GTTTCCTCGTTCGCTGCTATC 59.411 52.381 0.00 0.00 0.00 2.08
2748 5073 0.815095 TTCCTCGTTCGCTGCTATCA 59.185 50.000 0.00 0.00 0.00 2.15
2749 5074 1.032794 TCCTCGTTCGCTGCTATCAT 58.967 50.000 0.00 0.00 0.00 2.45
2750 5075 1.135046 CCTCGTTCGCTGCTATCATG 58.865 55.000 0.00 0.00 0.00 3.07
2829 5154 9.778993 ATCTTTGATACTGATTTGTCGAAATTG 57.221 29.630 0.00 0.00 31.58 2.32
2830 5155 8.783093 TCTTTGATACTGATTTGTCGAAATTGT 58.217 29.630 0.00 0.00 31.58 2.71
2864 5189 6.949578 AATCACCAATTAAGCACGAATTTG 57.050 33.333 0.00 0.00 0.00 2.32
3066 5394 8.999431 TCAACCATTCAGATAGAAACTTTACAC 58.001 33.333 0.00 0.00 40.22 2.90
3100 5428 7.994911 TCCATCTAATTATCTGCTTTCATGTGT 59.005 33.333 0.00 0.00 0.00 3.72
3104 5432 9.534565 TCTAATTATCTGCTTTCATGTGTAGAC 57.465 33.333 0.00 0.00 0.00 2.59
3287 5617 5.416083 ACTTGCATATCTGTAAGCGTAACA 58.584 37.500 8.53 0.00 45.75 2.41
3292 5622 6.474427 TGCATATCTGTAAGCGTAACACTTAC 59.526 38.462 8.68 8.68 46.30 2.34
3310 5640 6.374333 ACACTTACGTTGATGCATAAGGAAAT 59.626 34.615 0.00 0.00 0.00 2.17
3319 5649 7.425577 TGATGCATAAGGAAATATTGTCGAG 57.574 36.000 0.00 0.00 0.00 4.04
3336 5666 1.590238 CGAGTTCGGCTCATAGCTTTG 59.410 52.381 0.00 0.00 44.33 2.77
3339 5669 3.522553 AGTTCGGCTCATAGCTTTGTAC 58.477 45.455 4.00 0.00 41.99 2.90
3351 5681 1.335872 GCTTTGTACCCACACATGCAC 60.336 52.381 0.00 0.00 33.30 4.57
3426 5756 8.421784 ACATGATCTAGTTTTTATCCTAGCGAA 58.578 33.333 0.00 0.00 32.45 4.70
3429 5759 9.261180 TGATCTAGTTTTTATCCTAGCGAAATG 57.739 33.333 0.00 0.00 32.45 2.32
3460 5797 3.077484 ACTTCCACTGCTATGCAATGT 57.923 42.857 0.00 0.00 38.41 2.71
3468 5805 6.208402 TCCACTGCTATGCAATGTTTTCTTAA 59.792 34.615 0.00 0.00 38.41 1.85
3527 5864 8.956426 TGTTTAGATATTTTGGAGTTGACATCC 58.044 33.333 0.00 0.00 37.35 3.51
3528 5865 8.956426 GTTTAGATATTTTGGAGTTGACATCCA 58.044 33.333 0.00 0.00 45.15 3.41
3691 6028 3.259123 GCAATTCCTTGTTCCAAGGTGAT 59.741 43.478 19.55 13.22 38.55 3.06
3731 6068 2.170166 TGCCATTGTTCATCTGGGTTC 58.830 47.619 0.00 0.00 0.00 3.62
3748 6085 4.526262 TGGGTTCGGAATTGATCAAATTGT 59.474 37.500 13.09 0.00 38.64 2.71
3765 6102 4.691860 ATTGTAGTGTTCATTCAGCTGC 57.308 40.909 9.47 0.00 0.00 5.25
3767 6104 2.224499 TGTAGTGTTCATTCAGCTGCCA 60.224 45.455 9.47 0.00 0.00 4.92
3790 6127 8.303876 GCCATTTAGTTTCAAAGAGATTACCAA 58.696 33.333 0.00 0.00 0.00 3.67
3805 6142 9.167311 AGAGATTACCAAATAGTTAGCAACTTG 57.833 33.333 6.82 1.23 42.81 3.16
3829 6166 5.977821 TGTCTCTATTCTCTCTGGTCCTA 57.022 43.478 0.00 0.00 0.00 2.94
3879 6216 7.604927 GGTATTACATTTCAGTACAGTTGTCCA 59.395 37.037 0.00 0.00 0.00 4.02
3940 6278 7.040201 ACAAGTGAAGTCTTCAACATGCATAAT 60.040 33.333 16.86 0.00 42.15 1.28
4022 6360 7.043192 CCAGTTCAATCACAAACATTTCACTTC 60.043 37.037 0.00 0.00 0.00 3.01
4039 6377 6.214191 TCACTTCTCAATACTTAGAGGCTG 57.786 41.667 0.00 0.00 32.76 4.85
4040 6378 5.127845 TCACTTCTCAATACTTAGAGGCTGG 59.872 44.000 0.00 0.00 32.76 4.85
4047 6385 2.080654 ACTTAGAGGCTGGAGCTAGG 57.919 55.000 0.00 0.00 41.70 3.02
4060 6398 5.353394 TGGAGCTAGGTGATTCGTATTTT 57.647 39.130 0.00 0.00 0.00 1.82
4070 6408 3.438781 TGATTCGTATTTTCACCAGGCAC 59.561 43.478 0.00 0.00 0.00 5.01
4081 6419 1.139058 CACCAGGCACTATGTACTCCC 59.861 57.143 0.00 0.00 36.02 4.30
4107 6445 7.673180 TCCGTCCCATATTATAAGATCGTTTT 58.327 34.615 0.00 0.00 0.00 2.43
4109 6447 7.234384 CGTCCCATATTATAAGATCGTTTTGC 58.766 38.462 0.00 0.00 0.00 3.68
4110 6448 7.095397 CGTCCCATATTATAAGATCGTTTTGCA 60.095 37.037 0.00 0.00 0.00 4.08
4276 6614 2.493278 CACCAGGGATTTCGATGCTTTT 59.507 45.455 0.00 0.00 0.00 2.27
4557 6929 8.585881 TCCACCAGATAACAAATATAGCTAGAC 58.414 37.037 0.00 0.00 0.00 2.59
4558 6930 8.367911 CCACCAGATAACAAATATAGCTAGACA 58.632 37.037 0.00 0.00 0.00 3.41
4601 6973 7.308589 GGAGTGAGTAAAATGTACAGTTTGCAT 60.309 37.037 29.48 18.61 34.34 3.96
4815 7188 0.039798 GTGTGCACTGTTGATGCCAG 60.040 55.000 19.41 0.00 42.69 4.85
4843 7216 0.314935 AACCGGATGCTTGTTTGCTG 59.685 50.000 9.46 0.00 0.00 4.41
4898 7275 7.496529 TTTATCACATGGCTAGTTATCTTGC 57.503 36.000 0.00 0.00 40.60 4.01
4901 7278 4.877823 TCACATGGCTAGTTATCTTGCTTG 59.122 41.667 0.00 7.71 40.98 4.01
4904 7281 5.711976 ACATGGCTAGTTATCTTGCTTGTTT 59.288 36.000 0.00 0.00 40.98 2.83
5083 7470 1.066645 TGTCATGCATCTCGTCTTGCT 60.067 47.619 0.00 0.00 39.60 3.91
5084 7471 2.166254 TGTCATGCATCTCGTCTTGCTA 59.834 45.455 0.00 0.00 39.60 3.49
5085 7472 3.190079 GTCATGCATCTCGTCTTGCTAA 58.810 45.455 0.00 0.00 39.60 3.09
5482 7975 4.427096 ACTATCATACCGAGAGCAATCG 57.573 45.455 3.79 3.79 36.35 3.34
5483 7976 2.071688 ATCATACCGAGAGCAATCGC 57.928 50.000 5.16 0.00 41.37 4.58
5584 8085 9.678260 GTGATATCAAGCCTAATCCTTCATAAT 57.322 33.333 7.07 0.00 0.00 1.28
5631 8133 8.936864 CATATATAGAATTCAAAGGTTCCGACC 58.063 37.037 8.44 0.00 46.92 4.79
5663 8165 3.307691 CCTGATAGTTTGCCACCAGAGAA 60.308 47.826 0.00 0.00 0.00 2.87
5722 8231 2.540515 CAAGTATACTGGTGGCAGTCG 58.459 52.381 6.06 0.00 36.68 4.18
5835 8352 3.354948 ACTGCAGAGGATAATTGTGCA 57.645 42.857 23.35 0.00 41.72 4.57
5940 8457 1.747325 ATGGCAACTGGGTGTGCAAC 61.747 55.000 0.00 0.00 37.61 4.17
5943 8460 1.999071 GCAACTGGGTGTGCAACGAA 61.999 55.000 0.00 0.00 42.39 3.85
5961 8478 4.248859 ACGAACATGAGATGAAGACCAAG 58.751 43.478 0.00 0.00 0.00 3.61
5970 8487 0.899717 TGAAGACCAAGCCCAATGCC 60.900 55.000 0.00 0.00 42.71 4.40
6115 8639 0.179127 CGAGCGATGAAGAGAAGGCA 60.179 55.000 0.00 0.00 0.00 4.75
6136 8660 1.522580 GAGGGAGCGATTGACTGGC 60.523 63.158 0.00 0.00 0.00 4.85
6145 8669 1.542375 ATTGACTGGCCCAGACCCT 60.542 57.895 19.90 0.00 35.18 4.34
6232 8756 1.480954 GTTAGCCCAGATCGTCCAGAA 59.519 52.381 0.00 0.00 0.00 3.02
6267 8791 9.783425 CGCAACTTTCTAATTTTCATTTTCTTC 57.217 29.630 0.00 0.00 0.00 2.87
6278 8807 9.801873 AATTTTCATTTTCTTCCATATACACCG 57.198 29.630 0.00 0.00 0.00 4.94
6296 8825 0.090676 CGTACAGTAGTGCGCAAACG 59.909 55.000 14.00 12.29 46.20 3.60
6361 8891 5.413499 CCATAAATTGCAGAACTTCCCTTG 58.587 41.667 0.00 0.00 0.00 3.61
6362 8892 3.391506 AAATTGCAGAACTTCCCTTGC 57.608 42.857 0.00 0.00 0.00 4.01
6363 8893 2.299326 ATTGCAGAACTTCCCTTGCT 57.701 45.000 3.85 0.00 0.00 3.91
6368 8906 2.586425 CAGAACTTCCCTTGCTGGAAA 58.414 47.619 4.82 0.00 43.62 3.13
6369 8907 3.160269 CAGAACTTCCCTTGCTGGAAAT 58.840 45.455 4.82 0.00 43.62 2.17
6373 8911 0.178938 TTCCCTTGCTGGAAATGCCA 60.179 50.000 1.16 0.00 46.96 4.92
6400 8938 4.172512 CCGGCTGGAGATGCAGCT 62.173 66.667 22.99 2.90 43.44 4.24
6406 8944 0.034767 CTGGAGATGCAGCTGGGAAA 60.035 55.000 10.40 0.00 0.00 3.13
6424 8967 4.399303 GGGAAACACCTACTGATGAAATGG 59.601 45.833 0.00 0.00 38.98 3.16
6432 8975 6.983307 CACCTACTGATGAAATGGAACTAGAG 59.017 42.308 0.00 0.00 0.00 2.43
6434 8979 7.181125 ACCTACTGATGAAATGGAACTAGAGTT 59.819 37.037 0.00 0.00 41.64 3.01
6476 9028 2.095461 TGCTCAGATCGAGTAGCAAGT 58.905 47.619 10.28 0.00 44.33 3.16
6514 9074 7.254488 GGAAATAGTTTGGCTCGAGTTCTAATC 60.254 40.741 15.13 11.10 0.00 1.75
6526 9086 7.569639 TCGAGTTCTAATCACTATTAGCAGT 57.430 36.000 0.00 0.00 42.93 4.40
6527 9087 7.997482 TCGAGTTCTAATCACTATTAGCAGTT 58.003 34.615 0.00 0.00 42.93 3.16
6529 9089 9.088512 CGAGTTCTAATCACTATTAGCAGTTTT 57.911 33.333 0.00 0.00 42.93 2.43
6534 9094 8.758829 TCTAATCACTATTAGCAGTTTTCCTCA 58.241 33.333 0.00 0.00 42.93 3.86
6536 9096 8.443953 AATCACTATTAGCAGTTTTCCTCATC 57.556 34.615 0.00 0.00 0.00 2.92
6542 9105 4.906747 AGCAGTTTTCCTCATCTTCTCT 57.093 40.909 0.00 0.00 0.00 3.10
6544 9107 5.244755 AGCAGTTTTCCTCATCTTCTCTTC 58.755 41.667 0.00 0.00 0.00 2.87
6554 9117 6.267699 TCCTCATCTTCTCTTCTGTAAACACA 59.732 38.462 0.00 0.00 0.00 3.72
6555 9118 6.367422 CCTCATCTTCTCTTCTGTAAACACAC 59.633 42.308 0.00 0.00 0.00 3.82
6599 9166 1.000955 CAGTGTCCCTGACAGTACCAC 59.999 57.143 4.37 4.83 43.37 4.16
6600 9167 0.320697 GTGTCCCTGACAGTACCACC 59.679 60.000 0.93 0.00 43.57 4.61
6601 9168 0.105401 TGTCCCTGACAGTACCACCA 60.105 55.000 0.93 0.00 37.67 4.17
6602 9169 1.276622 GTCCCTGACAGTACCACCAT 58.723 55.000 0.93 0.00 32.09 3.55
6606 9177 2.569853 CCCTGACAGTACCACCATTGTA 59.430 50.000 0.93 0.00 0.00 2.41
6906 9477 2.186903 CCTGCAACCTCGCCGTAT 59.813 61.111 0.00 0.00 0.00 3.06
7572 10149 5.518812 TGGACAACATTTCTTCACAAATCG 58.481 37.500 0.00 0.00 0.00 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
941 2654 9.145865 CCGCTATCCTCTTCTTCTTTTATTATC 57.854 37.037 0.00 0.00 0.00 1.75
946 2659 4.101119 CCCCGCTATCCTCTTCTTCTTTTA 59.899 45.833 0.00 0.00 0.00 1.52
956 2669 0.191064 TTCCATCCCCGCTATCCTCT 59.809 55.000 0.00 0.00 0.00 3.69
959 2672 0.678048 GCATTCCATCCCCGCTATCC 60.678 60.000 0.00 0.00 0.00 2.59
960 2673 0.036732 TGCATTCCATCCCCGCTATC 59.963 55.000 0.00 0.00 0.00 2.08
961 2674 0.700564 ATGCATTCCATCCCCGCTAT 59.299 50.000 0.00 0.00 0.00 2.97
962 2675 0.250858 CATGCATTCCATCCCCGCTA 60.251 55.000 0.00 0.00 29.71 4.26
963 2676 1.529948 CATGCATTCCATCCCCGCT 60.530 57.895 0.00 0.00 29.71 5.52
965 2678 2.567497 GCCATGCATTCCATCCCCG 61.567 63.158 0.00 0.00 29.71 5.73
971 2684 1.890625 GCTGGTTGCCATGCATTCCA 61.891 55.000 0.00 11.16 38.76 3.53
1208 2937 4.742201 CCTCGTGACAGTGGCCGG 62.742 72.222 0.00 0.00 0.00 6.13
1210 2939 3.302347 CTCCCTCGTGACAGTGGCC 62.302 68.421 0.00 0.00 0.00 5.36
1212 2941 2.650116 CCCTCCCTCGTGACAGTGG 61.650 68.421 0.00 0.00 0.00 4.00
1214 2943 1.606889 GACCCTCCCTCGTGACAGT 60.607 63.158 0.00 0.00 0.00 3.55
1215 2944 2.701780 CGACCCTCCCTCGTGACAG 61.702 68.421 0.00 0.00 0.00 3.51
1217 2946 0.465097 TATCGACCCTCCCTCGTGAC 60.465 60.000 0.00 0.00 32.77 3.67
1218 2947 0.465097 GTATCGACCCTCCCTCGTGA 60.465 60.000 0.00 0.00 32.77 4.35
1219 2948 1.783031 CGTATCGACCCTCCCTCGTG 61.783 65.000 0.00 0.00 32.77 4.35
1220 2949 1.525535 CGTATCGACCCTCCCTCGT 60.526 63.158 0.00 0.00 32.77 4.18
1221 2950 2.905807 GCGTATCGACCCTCCCTCG 61.906 68.421 0.00 0.00 0.00 4.63
1222 2951 2.562876 GGCGTATCGACCCTCCCTC 61.563 68.421 0.00 0.00 0.00 4.30
1223 2952 2.521224 GGCGTATCGACCCTCCCT 60.521 66.667 0.00 0.00 0.00 4.20
1224 2953 3.974757 CGGCGTATCGACCCTCCC 61.975 72.222 0.00 0.00 0.00 4.30
1258 2987 2.202770 CTCTGCTCTGCTCGCTGG 60.203 66.667 0.00 0.00 0.00 4.85
1260 2989 4.146075 GGCTCTGCTCTGCTCGCT 62.146 66.667 0.00 0.00 0.00 4.93
1261 2990 4.447989 TGGCTCTGCTCTGCTCGC 62.448 66.667 0.00 0.00 0.00 5.03
1262 2991 2.202770 CTGGCTCTGCTCTGCTCG 60.203 66.667 0.00 0.00 0.00 5.03
1263 2992 2.512057 GCTGGCTCTGCTCTGCTC 60.512 66.667 0.00 0.00 0.00 4.26
1264 2993 4.454319 CGCTGGCTCTGCTCTGCT 62.454 66.667 0.00 0.00 0.00 4.24
1288 3017 3.151022 GGACGGGAGGAGGAGCAG 61.151 72.222 0.00 0.00 0.00 4.24
1585 3329 1.064825 GGGGAGAGGTGGTTGAAAGA 58.935 55.000 0.00 0.00 0.00 2.52
1586 3330 1.003696 GAGGGGAGAGGTGGTTGAAAG 59.996 57.143 0.00 0.00 0.00 2.62
1588 3332 0.840722 GGAGGGGAGAGGTGGTTGAA 60.841 60.000 0.00 0.00 0.00 2.69
1590 3334 2.660064 CGGAGGGGAGAGGTGGTTG 61.660 68.421 0.00 0.00 0.00 3.77
1591 3335 2.284699 CGGAGGGGAGAGGTGGTT 60.285 66.667 0.00 0.00 0.00 3.67
1602 3346 3.537206 GAATGGGATCCGCGGAGGG 62.537 68.421 33.87 3.41 41.52 4.30
1605 3349 1.371183 GATGAATGGGATCCGCGGA 59.629 57.895 33.12 33.12 0.00 5.54
1627 3371 7.462724 GCGAAATGGAAACCAAAATCGAAATAG 60.463 37.037 19.30 0.00 38.36 1.73
1639 3383 2.631580 GCCGGCGAAATGGAAACCA 61.632 57.895 12.58 0.00 38.19 3.67
1641 3385 2.180769 GGCCGGCGAAATGGAAAC 59.819 61.111 22.54 0.00 0.00 2.78
1670 3432 1.670949 GCAGCGGGTCAGATGAGAGA 61.671 60.000 0.00 0.00 0.00 3.10
1675 3437 0.169672 CAAAAGCAGCGGGTCAGATG 59.830 55.000 0.00 0.00 0.00 2.90
1746 3509 3.689649 AGGATGTTGAAATGCTTACGGTC 59.310 43.478 0.00 0.00 0.00 4.79
1749 3512 4.728882 GCAGAGGATGTTGAAATGCTTACG 60.729 45.833 0.00 0.00 0.00 3.18
1892 3668 2.417339 TGCTATACGCATCGGACTTC 57.583 50.000 0.00 0.00 45.47 3.01
1902 3678 2.030457 GTGTCATGTTGGTGCTATACGC 59.970 50.000 0.00 0.00 39.77 4.42
1953 3729 0.734889 CGGTCATGGAGGTTGAATGC 59.265 55.000 0.00 0.00 0.00 3.56
2016 3829 3.190744 AGTCAGCAAGCAACATGAATGAG 59.809 43.478 0.00 0.00 0.00 2.90
2068 3915 4.713824 AGCATTCTGATGGTGTCATTTG 57.286 40.909 0.00 0.00 42.13 2.32
2083 3930 1.407258 AGGTAGCTCGAGTCAGCATTC 59.593 52.381 15.13 0.00 42.40 2.67
2093 3940 1.480954 GGTTCCAATCAGGTAGCTCGA 59.519 52.381 0.00 0.00 39.02 4.04
2177 4024 8.541312 GTCGCTAAAGCCTAAAAGTCTATAAAG 58.459 37.037 0.00 0.00 37.91 1.85
2178 4025 8.036575 TGTCGCTAAAGCCTAAAAGTCTATAAA 58.963 33.333 0.00 0.00 37.91 1.40
2179 4026 7.549839 TGTCGCTAAAGCCTAAAAGTCTATAA 58.450 34.615 0.00 0.00 37.91 0.98
2180 4027 7.104043 TGTCGCTAAAGCCTAAAAGTCTATA 57.896 36.000 0.00 0.00 37.91 1.31
2181 4028 5.974108 TGTCGCTAAAGCCTAAAAGTCTAT 58.026 37.500 0.00 0.00 37.91 1.98
2225 4546 3.185455 AGAAGGGAAGGTTAGACATGCT 58.815 45.455 0.00 0.00 0.00 3.79
2239 4560 2.103373 CTCATGGTCTCGAAGAAGGGA 58.897 52.381 0.00 0.00 34.09 4.20
2248 4569 1.728971 GTTGAAGCACTCATGGTCTCG 59.271 52.381 0.00 0.00 34.76 4.04
2254 4575 3.374367 CCTCTGATGTTGAAGCACTCATG 59.626 47.826 0.00 0.00 32.78 3.07
2257 4578 1.736681 GCCTCTGATGTTGAAGCACTC 59.263 52.381 0.00 0.00 0.00 3.51
2258 4579 1.612726 GGCCTCTGATGTTGAAGCACT 60.613 52.381 0.00 0.00 0.00 4.40
2259 4580 0.807496 GGCCTCTGATGTTGAAGCAC 59.193 55.000 0.00 0.00 0.00 4.40
2260 4581 0.674581 CGGCCTCTGATGTTGAAGCA 60.675 55.000 0.00 0.00 0.00 3.91
2261 4582 1.372087 CCGGCCTCTGATGTTGAAGC 61.372 60.000 0.00 0.00 0.00 3.86
2262 4583 0.745845 CCCGGCCTCTGATGTTGAAG 60.746 60.000 0.00 0.00 0.00 3.02
2263 4584 1.299648 CCCGGCCTCTGATGTTGAA 59.700 57.895 0.00 0.00 0.00 2.69
2264 4585 2.669133 CCCCGGCCTCTGATGTTGA 61.669 63.158 0.00 0.00 0.00 3.18
2265 4586 2.124570 CCCCGGCCTCTGATGTTG 60.125 66.667 0.00 0.00 0.00 3.33
2266 4587 2.833151 TACCCCCGGCCTCTGATGTT 62.833 60.000 0.00 0.00 0.00 2.71
2267 4588 2.833151 TTACCCCCGGCCTCTGATGT 62.833 60.000 0.00 0.00 0.00 3.06
2268 4589 1.418908 ATTACCCCCGGCCTCTGATG 61.419 60.000 0.00 0.00 0.00 3.07
2269 4590 1.073706 ATTACCCCCGGCCTCTGAT 60.074 57.895 0.00 0.00 0.00 2.90
2270 4591 1.764854 GATTACCCCCGGCCTCTGA 60.765 63.158 0.00 0.00 0.00 3.27
2271 4592 2.819284 GGATTACCCCCGGCCTCTG 61.819 68.421 0.00 0.00 0.00 3.35
2272 4593 2.447959 GGATTACCCCCGGCCTCT 60.448 66.667 0.00 0.00 0.00 3.69
2273 4594 2.447959 AGGATTACCCCCGGCCTC 60.448 66.667 0.00 0.00 36.73 4.70
2274 4595 2.447959 GAGGATTACCCCCGGCCT 60.448 66.667 0.00 0.00 36.73 5.19
2275 4596 3.567209 GGAGGATTACCCCCGGCC 61.567 72.222 0.00 0.00 36.73 6.13
2276 4597 1.642513 AAAGGAGGATTACCCCCGGC 61.643 60.000 0.00 0.00 36.73 6.13
2277 4598 0.924090 AAAAGGAGGATTACCCCCGG 59.076 55.000 0.00 0.00 36.73 5.73
2278 4599 1.844497 AGAAAAGGAGGATTACCCCCG 59.156 52.381 0.00 0.00 36.73 5.73
2279 4600 5.461516 TTTAGAAAAGGAGGATTACCCCC 57.538 43.478 0.00 0.00 36.73 5.40
2301 4622 6.095377 CAGCTGTTGAAACACTCTTCTTTTT 58.905 36.000 5.25 0.00 34.70 1.94
2302 4623 5.393461 CCAGCTGTTGAAACACTCTTCTTTT 60.393 40.000 13.81 0.00 34.70 2.27
2303 4624 4.096984 CCAGCTGTTGAAACACTCTTCTTT 59.903 41.667 13.81 0.00 34.70 2.52
2304 4625 3.629398 CCAGCTGTTGAAACACTCTTCTT 59.371 43.478 13.81 0.00 34.70 2.52
2305 4626 3.209410 CCAGCTGTTGAAACACTCTTCT 58.791 45.455 13.81 0.00 34.70 2.85
2306 4627 2.287248 GCCAGCTGTTGAAACACTCTTC 60.287 50.000 13.81 0.00 34.70 2.87
2307 4628 1.678101 GCCAGCTGTTGAAACACTCTT 59.322 47.619 13.81 0.00 34.70 2.85
2308 4629 1.312815 GCCAGCTGTTGAAACACTCT 58.687 50.000 13.81 0.00 34.70 3.24
2347 4668 6.989659 ACTTTGAGTCGAGGAACAATACTAA 58.010 36.000 0.00 0.00 0.00 2.24
2354 4675 3.134081 AGGAAACTTTGAGTCGAGGAACA 59.866 43.478 0.00 0.00 37.44 3.18
2394 4715 9.318041 CGTAATGAACAGAATTAAACAGAACAG 57.682 33.333 0.00 0.00 0.00 3.16
2395 4716 8.832521 ACGTAATGAACAGAATTAAACAGAACA 58.167 29.630 0.00 0.00 0.00 3.18
2459 4784 9.905713 TCTGAAGGTAAGCAAATATTGACTAAT 57.094 29.630 0.00 0.00 0.00 1.73
2460 4785 9.905713 ATCTGAAGGTAAGCAAATATTGACTAA 57.094 29.630 0.00 0.00 0.00 2.24
2461 4786 9.547753 GATCTGAAGGTAAGCAAATATTGACTA 57.452 33.333 0.00 0.00 0.00 2.59
2462 4787 8.049117 TGATCTGAAGGTAAGCAAATATTGACT 58.951 33.333 0.00 0.00 0.00 3.41
2463 4788 8.125448 GTGATCTGAAGGTAAGCAAATATTGAC 58.875 37.037 0.00 0.00 0.00 3.18
2464 4789 7.283127 GGTGATCTGAAGGTAAGCAAATATTGA 59.717 37.037 0.00 0.00 0.00 2.57
2465 4790 7.067372 TGGTGATCTGAAGGTAAGCAAATATTG 59.933 37.037 0.00 0.00 0.00 1.90
2466 4791 7.118723 TGGTGATCTGAAGGTAAGCAAATATT 58.881 34.615 0.00 0.00 0.00 1.28
2467 4792 6.662755 TGGTGATCTGAAGGTAAGCAAATAT 58.337 36.000 0.00 0.00 0.00 1.28
2468 4793 6.061022 TGGTGATCTGAAGGTAAGCAAATA 57.939 37.500 0.00 0.00 0.00 1.40
2469 4794 4.922206 TGGTGATCTGAAGGTAAGCAAAT 58.078 39.130 0.00 0.00 0.00 2.32
2470 4795 4.365514 TGGTGATCTGAAGGTAAGCAAA 57.634 40.909 0.00 0.00 0.00 3.68
2471 4796 4.365514 TTGGTGATCTGAAGGTAAGCAA 57.634 40.909 0.00 0.00 0.00 3.91
2472 4797 4.574674 ATTGGTGATCTGAAGGTAAGCA 57.425 40.909 0.00 0.00 0.00 3.91
2473 4798 6.458888 GCTTAATTGGTGATCTGAAGGTAAGC 60.459 42.308 10.68 10.68 34.74 3.09
2474 4799 6.238211 CGCTTAATTGGTGATCTGAAGGTAAG 60.238 42.308 0.00 0.00 0.00 2.34
2475 4800 5.584649 CGCTTAATTGGTGATCTGAAGGTAA 59.415 40.000 0.00 0.00 0.00 2.85
2476 4801 5.116180 CGCTTAATTGGTGATCTGAAGGTA 58.884 41.667 0.00 0.00 0.00 3.08
2477 4802 3.941483 CGCTTAATTGGTGATCTGAAGGT 59.059 43.478 0.00 0.00 0.00 3.50
2478 4803 3.242870 GCGCTTAATTGGTGATCTGAAGG 60.243 47.826 0.00 0.00 0.00 3.46
2479 4804 3.544834 CGCGCTTAATTGGTGATCTGAAG 60.545 47.826 5.56 0.00 0.00 3.02
2480 4805 2.351418 CGCGCTTAATTGGTGATCTGAA 59.649 45.455 5.56 0.00 0.00 3.02
2481 4806 1.933181 CGCGCTTAATTGGTGATCTGA 59.067 47.619 5.56 0.00 0.00 3.27
2482 4807 1.003545 CCGCGCTTAATTGGTGATCTG 60.004 52.381 5.56 0.00 0.00 2.90
2483 4808 1.299541 CCGCGCTTAATTGGTGATCT 58.700 50.000 5.56 0.00 0.00 2.75
2484 4809 0.307760 CCCGCGCTTAATTGGTGATC 59.692 55.000 5.56 0.00 0.00 2.92
2485 4810 0.393808 ACCCGCGCTTAATTGGTGAT 60.394 50.000 5.56 0.00 0.00 3.06
2486 4811 0.606944 AACCCGCGCTTAATTGGTGA 60.607 50.000 5.56 0.00 0.00 4.02
2487 4812 0.179174 GAACCCGCGCTTAATTGGTG 60.179 55.000 5.56 0.00 0.00 4.17
2488 4813 1.310216 GGAACCCGCGCTTAATTGGT 61.310 55.000 5.56 0.00 0.00 3.67
2489 4814 1.029947 AGGAACCCGCGCTTAATTGG 61.030 55.000 5.56 0.00 0.00 3.16
2490 4815 0.098728 CAGGAACCCGCGCTTAATTG 59.901 55.000 5.56 0.00 0.00 2.32
2491 4816 1.654023 GCAGGAACCCGCGCTTAATT 61.654 55.000 5.56 0.00 0.00 1.40
2492 4817 2.112815 GCAGGAACCCGCGCTTAAT 61.113 57.895 5.56 0.00 0.00 1.40
2493 4818 2.744709 GCAGGAACCCGCGCTTAA 60.745 61.111 5.56 0.00 0.00 1.85
2494 4819 2.813226 ATTGCAGGAACCCGCGCTTA 62.813 55.000 5.56 0.00 0.00 3.09
2495 4820 2.813226 TATTGCAGGAACCCGCGCTT 62.813 55.000 5.56 0.00 0.00 4.68
2496 4821 2.608970 ATATTGCAGGAACCCGCGCT 62.609 55.000 5.56 0.00 0.00 5.92
2497 4822 2.117941 GATATTGCAGGAACCCGCGC 62.118 60.000 0.00 0.00 0.00 6.86
2498 4823 0.532862 AGATATTGCAGGAACCCGCG 60.533 55.000 0.00 0.00 0.00 6.46
2499 4824 1.680338 AAGATATTGCAGGAACCCGC 58.320 50.000 0.00 0.00 0.00 6.13
2500 4825 5.794894 AGTATAAGATATTGCAGGAACCCG 58.205 41.667 0.00 0.00 0.00 5.28
2501 4826 9.740710 AATTAGTATAAGATATTGCAGGAACCC 57.259 33.333 0.00 0.00 0.00 4.11
2526 4851 9.263446 ACCAGGATAGTGTTTAGTTATGACTAA 57.737 33.333 6.01 6.01 44.49 2.24
2527 4852 8.692710 CACCAGGATAGTGTTTAGTTATGACTA 58.307 37.037 0.00 0.00 37.33 2.59
2528 4853 7.180408 ACACCAGGATAGTGTTTAGTTATGACT 59.820 37.037 0.00 0.00 46.07 3.41
2529 4854 7.277981 CACACCAGGATAGTGTTTAGTTATGAC 59.722 40.741 0.00 0.00 46.07 3.06
2530 4855 7.179516 TCACACCAGGATAGTGTTTAGTTATGA 59.820 37.037 0.00 0.00 46.07 2.15
2531 4856 7.327975 TCACACCAGGATAGTGTTTAGTTATG 58.672 38.462 0.00 0.00 46.07 1.90
2532 4857 7.490657 TCACACCAGGATAGTGTTTAGTTAT 57.509 36.000 0.00 0.00 46.07 1.89
2533 4858 6.921486 TCACACCAGGATAGTGTTTAGTTA 57.079 37.500 0.00 0.00 46.07 2.24
2534 4859 5.818678 TCACACCAGGATAGTGTTTAGTT 57.181 39.130 0.00 0.00 46.07 2.24
2535 4860 5.394224 CGATCACACCAGGATAGTGTTTAGT 60.394 44.000 0.00 0.00 46.07 2.24
2536 4861 5.043903 CGATCACACCAGGATAGTGTTTAG 58.956 45.833 0.00 0.00 46.07 1.85
2537 4862 4.464951 ACGATCACACCAGGATAGTGTTTA 59.535 41.667 0.00 0.00 46.07 2.01
2538 4863 3.260884 ACGATCACACCAGGATAGTGTTT 59.739 43.478 0.00 0.00 46.07 2.83
2539 4864 2.832129 ACGATCACACCAGGATAGTGTT 59.168 45.455 0.00 0.00 46.07 3.32
2541 4866 3.526931 AACGATCACACCAGGATAGTG 57.473 47.619 0.00 0.00 41.15 2.74
2542 4867 4.553330 AAAACGATCACACCAGGATAGT 57.447 40.909 0.00 0.00 32.94 2.12
2543 4868 5.466728 CCATAAAACGATCACACCAGGATAG 59.533 44.000 0.00 0.00 0.00 2.08
2544 4869 5.104693 ACCATAAAACGATCACACCAGGATA 60.105 40.000 0.00 0.00 0.00 2.59
2545 4870 4.199310 CCATAAAACGATCACACCAGGAT 58.801 43.478 0.00 0.00 0.00 3.24
2546 4871 3.008594 ACCATAAAACGATCACACCAGGA 59.991 43.478 0.00 0.00 0.00 3.86
2547 4872 3.126858 CACCATAAAACGATCACACCAGG 59.873 47.826 0.00 0.00 0.00 4.45
2548 4873 3.751175 ACACCATAAAACGATCACACCAG 59.249 43.478 0.00 0.00 0.00 4.00
2549 4874 3.745799 ACACCATAAAACGATCACACCA 58.254 40.909 0.00 0.00 0.00 4.17
2550 4875 4.454504 AGAACACCATAAAACGATCACACC 59.545 41.667 0.00 0.00 0.00 4.16
2551 4876 5.607119 AGAACACCATAAAACGATCACAC 57.393 39.130 0.00 0.00 0.00 3.82
2552 4877 5.995282 AGAAGAACACCATAAAACGATCACA 59.005 36.000 0.00 0.00 0.00 3.58
2553 4878 6.402226 GGAGAAGAACACCATAAAACGATCAC 60.402 42.308 0.00 0.00 0.00 3.06
2554 4879 5.642063 GGAGAAGAACACCATAAAACGATCA 59.358 40.000 0.00 0.00 0.00 2.92
2555 4880 5.642063 TGGAGAAGAACACCATAAAACGATC 59.358 40.000 0.00 0.00 34.50 3.69
2556 4881 5.556915 TGGAGAAGAACACCATAAAACGAT 58.443 37.500 0.00 0.00 34.50 3.73
2557 4882 4.963373 TGGAGAAGAACACCATAAAACGA 58.037 39.130 0.00 0.00 34.50 3.85
2558 4883 5.880054 ATGGAGAAGAACACCATAAAACG 57.120 39.130 0.00 0.00 45.49 3.60
2559 4884 9.406828 GTTTAATGGAGAAGAACACCATAAAAC 57.593 33.333 0.00 0.00 46.34 2.43
2560 4885 9.362151 AGTTTAATGGAGAAGAACACCATAAAA 57.638 29.630 0.00 0.00 46.34 1.52
2561 4886 8.934023 AGTTTAATGGAGAAGAACACCATAAA 57.066 30.769 0.00 0.00 46.34 1.40
2562 4887 8.934023 AAGTTTAATGGAGAAGAACACCATAA 57.066 30.769 0.00 0.00 46.34 1.90
2563 4888 8.934023 AAAGTTTAATGGAGAAGAACACCATA 57.066 30.769 0.00 0.00 46.34 2.74
2565 4890 8.934023 ATAAAGTTTAATGGAGAAGAACACCA 57.066 30.769 0.00 0.00 42.85 4.17
2587 4912 9.813446 GCTAAAGCCTAAAAGTCTACTGTATAA 57.187 33.333 0.00 0.00 34.31 0.98
2588 4913 8.133627 CGCTAAAGCCTAAAAGTCTACTGTATA 58.866 37.037 0.00 0.00 37.91 1.47
2589 4914 6.979238 CGCTAAAGCCTAAAAGTCTACTGTAT 59.021 38.462 0.00 0.00 37.91 2.29
2590 4915 6.151648 TCGCTAAAGCCTAAAAGTCTACTGTA 59.848 38.462 0.00 0.00 37.91 2.74
2591 4916 5.047519 TCGCTAAAGCCTAAAAGTCTACTGT 60.048 40.000 0.00 0.00 37.91 3.55
2592 4917 5.288952 GTCGCTAAAGCCTAAAAGTCTACTG 59.711 44.000 0.00 0.00 37.91 2.74
2593 4918 5.047519 TGTCGCTAAAGCCTAAAAGTCTACT 60.048 40.000 0.00 0.00 37.91 2.57
2594 4919 5.166398 TGTCGCTAAAGCCTAAAAGTCTAC 58.834 41.667 0.00 0.00 37.91 2.59
2595 4920 5.395682 TGTCGCTAAAGCCTAAAAGTCTA 57.604 39.130 0.00 0.00 37.91 2.59
2596 4921 4.246458 CTGTCGCTAAAGCCTAAAAGTCT 58.754 43.478 0.00 0.00 37.91 3.24
2597 4922 3.181519 GCTGTCGCTAAAGCCTAAAAGTC 60.182 47.826 0.00 0.00 37.91 3.01
2598 4923 2.742589 GCTGTCGCTAAAGCCTAAAAGT 59.257 45.455 0.00 0.00 37.91 2.66
2599 4924 3.003480 AGCTGTCGCTAAAGCCTAAAAG 58.997 45.455 0.00 0.00 46.79 2.27
2600 4925 3.053831 AGCTGTCGCTAAAGCCTAAAA 57.946 42.857 0.00 0.00 46.79 1.52
2601 4926 2.762535 AGCTGTCGCTAAAGCCTAAA 57.237 45.000 0.00 0.00 46.79 1.85
2612 4937 1.931906 TCAGATGAATGAGCTGTCGC 58.068 50.000 0.00 0.00 39.29 5.19
2613 4938 5.481200 AAAATCAGATGAATGAGCTGTCG 57.519 39.130 0.00 0.00 39.29 4.35
2635 4960 4.231890 AGGGGAGGTTAGATATGCCAAAAA 59.768 41.667 0.00 0.00 0.00 1.94
2636 4961 3.791545 AGGGGAGGTTAGATATGCCAAAA 59.208 43.478 0.00 0.00 0.00 2.44
2637 4962 3.403322 AGGGGAGGTTAGATATGCCAAA 58.597 45.455 0.00 0.00 0.00 3.28
2638 4963 3.074857 AGGGGAGGTTAGATATGCCAA 57.925 47.619 0.00 0.00 0.00 4.52
2639 4964 2.815357 AGGGGAGGTTAGATATGCCA 57.185 50.000 0.00 0.00 0.00 4.92
2640 4965 3.252351 AGAAGGGGAGGTTAGATATGCC 58.748 50.000 0.00 0.00 0.00 4.40
2641 4966 3.056465 CGAGAAGGGGAGGTTAGATATGC 60.056 52.174 0.00 0.00 0.00 3.14
2642 4967 3.511934 CCGAGAAGGGGAGGTTAGATATG 59.488 52.174 0.00 0.00 35.97 1.78
2643 4968 3.401683 TCCGAGAAGGGGAGGTTAGATAT 59.598 47.826 0.00 0.00 41.52 1.63
2644 4969 2.787625 TCCGAGAAGGGGAGGTTAGATA 59.212 50.000 0.00 0.00 41.52 1.98
2645 4970 1.574339 TCCGAGAAGGGGAGGTTAGAT 59.426 52.381 0.00 0.00 41.52 1.98
2646 4971 1.005228 TCCGAGAAGGGGAGGTTAGA 58.995 55.000 0.00 0.00 41.52 2.10
2647 4972 1.063867 TCTCCGAGAAGGGGAGGTTAG 60.064 57.143 7.90 0.00 46.85 2.34
2648 4973 1.005228 TCTCCGAGAAGGGGAGGTTA 58.995 55.000 7.90 0.00 46.85 2.85
2649 4974 1.781676 TCTCCGAGAAGGGGAGGTT 59.218 57.895 7.90 0.00 46.85 3.50
2650 4975 3.521810 TCTCCGAGAAGGGGAGGT 58.478 61.111 7.90 0.00 46.85 3.85
2654 4979 3.031736 TGAAATAGTCTCCGAGAAGGGG 58.968 50.000 0.00 0.00 43.85 4.79
2655 4980 4.081642 TGTTGAAATAGTCTCCGAGAAGGG 60.082 45.833 0.00 0.00 41.52 3.95
2656 4981 5.073311 TGTTGAAATAGTCTCCGAGAAGG 57.927 43.478 0.00 0.00 42.97 3.46
2657 4982 4.564769 GCTGTTGAAATAGTCTCCGAGAAG 59.435 45.833 0.00 0.00 0.00 2.85
2658 4983 4.220821 AGCTGTTGAAATAGTCTCCGAGAA 59.779 41.667 0.00 0.00 0.00 2.87
2659 4984 3.764434 AGCTGTTGAAATAGTCTCCGAGA 59.236 43.478 0.00 0.00 0.00 4.04
2660 4985 3.862267 CAGCTGTTGAAATAGTCTCCGAG 59.138 47.826 5.25 0.00 0.00 4.63
2661 4986 3.368427 CCAGCTGTTGAAATAGTCTCCGA 60.368 47.826 13.81 0.00 0.00 4.55
2662 4987 2.932614 CCAGCTGTTGAAATAGTCTCCG 59.067 50.000 13.81 0.00 0.00 4.63
2663 4988 2.680339 GCCAGCTGTTGAAATAGTCTCC 59.320 50.000 13.81 0.00 0.00 3.71
2664 4989 2.680339 GGCCAGCTGTTGAAATAGTCTC 59.320 50.000 13.81 0.00 0.00 3.36
2665 4990 2.307098 AGGCCAGCTGTTGAAATAGTCT 59.693 45.455 13.81 0.00 0.00 3.24
2666 4991 2.716217 AGGCCAGCTGTTGAAATAGTC 58.284 47.619 13.81 0.00 0.00 2.59
2667 4992 2.821969 CAAGGCCAGCTGTTGAAATAGT 59.178 45.455 13.81 0.00 0.00 2.12
2668 4993 2.821969 ACAAGGCCAGCTGTTGAAATAG 59.178 45.455 19.19 0.74 0.00 1.73
2669 4994 2.819608 GACAAGGCCAGCTGTTGAAATA 59.180 45.455 19.19 0.00 0.00 1.40
2670 4995 1.615392 GACAAGGCCAGCTGTTGAAAT 59.385 47.619 19.19 0.71 0.00 2.17
2671 4996 1.032014 GACAAGGCCAGCTGTTGAAA 58.968 50.000 19.19 0.00 0.00 2.69
2672 4997 0.823356 GGACAAGGCCAGCTGTTGAA 60.823 55.000 19.19 0.00 0.00 2.69
2673 4998 1.228245 GGACAAGGCCAGCTGTTGA 60.228 57.895 19.19 0.00 0.00 3.18
2674 4999 0.896940 ATGGACAAGGCCAGCTGTTG 60.897 55.000 13.81 13.10 42.15 3.33
2675 5000 0.698238 TATGGACAAGGCCAGCTGTT 59.302 50.000 13.81 0.00 42.15 3.16
2676 5001 0.698238 TTATGGACAAGGCCAGCTGT 59.302 50.000 13.81 4.97 42.15 4.40
2677 5002 1.679680 CATTATGGACAAGGCCAGCTG 59.320 52.381 6.78 6.78 42.15 4.24
2678 5003 2.025863 GCATTATGGACAAGGCCAGCT 61.026 52.381 5.01 0.00 42.15 4.24
2679 5004 0.386838 GCATTATGGACAAGGCCAGC 59.613 55.000 5.01 0.00 42.15 4.85
2680 5005 2.062971 AGCATTATGGACAAGGCCAG 57.937 50.000 5.01 0.00 42.15 4.85
2681 5006 3.882102 ATAGCATTATGGACAAGGCCA 57.118 42.857 5.01 0.00 43.23 5.36
2682 5007 5.256474 ACATATAGCATTATGGACAAGGCC 58.744 41.667 0.00 0.00 35.88 5.19
2683 5008 7.106239 ACTACATATAGCATTATGGACAAGGC 58.894 38.462 9.80 0.00 34.50 4.35
2687 5012 9.185680 ACGATACTACATATAGCATTATGGACA 57.814 33.333 9.80 0.00 34.50 4.02
2690 5015 9.464714 GGAACGATACTACATATAGCATTATGG 57.535 37.037 9.80 0.00 34.50 2.74
2693 5018 8.610035 CGAGGAACGATACTACATATAGCATTA 58.390 37.037 0.00 0.00 45.77 1.90
2694 5019 7.336176 TCGAGGAACGATACTACATATAGCATT 59.664 37.037 0.00 0.00 46.45 3.56
2695 5020 6.822170 TCGAGGAACGATACTACATATAGCAT 59.178 38.462 0.00 0.00 46.45 3.79
2696 5021 6.168389 TCGAGGAACGATACTACATATAGCA 58.832 40.000 0.00 0.00 46.45 3.49
2697 5022 6.659361 TCGAGGAACGATACTACATATAGC 57.341 41.667 0.00 0.00 46.45 2.97
2707 5032 9.853111 AGGAAACTTTGAGTCGAGGAACGATAC 62.853 44.444 0.00 0.00 46.79 2.24
2708 5033 7.965296 AGGAAACTTTGAGTCGAGGAACGATA 61.965 42.308 0.00 0.00 46.79 2.92
2709 5034 7.244551 AGGAAACTTTGAGTCGAGGAACGAT 62.245 44.000 0.00 0.00 46.79 3.73
2710 5035 6.002109 AGGAAACTTTGAGTCGAGGAACGA 62.002 45.833 0.00 0.00 44.11 3.85
2711 5036 2.475487 GGAAACTTTGAGTCGAGGAACG 59.525 50.000 0.00 0.00 44.09 3.95
2712 5037 3.729966 AGGAAACTTTGAGTCGAGGAAC 58.270 45.455 0.00 0.00 37.44 3.62
2713 5038 3.552273 CGAGGAAACTTTGAGTCGAGGAA 60.552 47.826 0.00 0.00 44.43 3.36
2714 5039 2.030185 CGAGGAAACTTTGAGTCGAGGA 60.030 50.000 0.00 0.00 44.43 3.71
2715 5040 2.288273 ACGAGGAAACTTTGAGTCGAGG 60.288 50.000 0.00 0.00 44.43 4.63
2716 5041 3.014604 ACGAGGAAACTTTGAGTCGAG 57.985 47.619 0.00 0.00 44.43 4.04
2717 5042 3.378339 GAACGAGGAAACTTTGAGTCGA 58.622 45.455 0.00 0.00 44.43 4.20
2718 5043 2.153247 CGAACGAGGAAACTTTGAGTCG 59.847 50.000 0.00 0.00 44.43 4.18
2719 5044 2.096860 GCGAACGAGGAAACTTTGAGTC 60.097 50.000 0.00 0.00 44.43 3.36
2720 5045 1.865340 GCGAACGAGGAAACTTTGAGT 59.135 47.619 0.00 0.00 44.43 3.41
2721 5046 2.096713 CAGCGAACGAGGAAACTTTGAG 60.097 50.000 0.00 0.00 44.43 3.02
2722 5047 1.864711 CAGCGAACGAGGAAACTTTGA 59.135 47.619 0.00 0.00 44.43 2.69
2723 5048 1.660333 GCAGCGAACGAGGAAACTTTG 60.660 52.381 0.00 0.00 44.43 2.77
2724 5049 0.586802 GCAGCGAACGAGGAAACTTT 59.413 50.000 0.00 0.00 44.43 2.66
2725 5050 0.249911 AGCAGCGAACGAGGAAACTT 60.250 50.000 0.00 0.00 44.43 2.66
2727 5052 1.588861 GATAGCAGCGAACGAGGAAAC 59.411 52.381 0.00 0.00 0.00 2.78
2728 5053 1.203758 TGATAGCAGCGAACGAGGAAA 59.796 47.619 0.00 0.00 0.00 3.13
2729 5054 0.815095 TGATAGCAGCGAACGAGGAA 59.185 50.000 0.00 0.00 0.00 3.36
2730 5055 1.032794 ATGATAGCAGCGAACGAGGA 58.967 50.000 0.00 0.00 0.00 3.71
2731 5056 1.135046 CATGATAGCAGCGAACGAGG 58.865 55.000 0.00 0.00 0.00 4.63
2732 5057 1.845266 ACATGATAGCAGCGAACGAG 58.155 50.000 0.00 0.00 0.00 4.18
2733 5058 1.926510 CAACATGATAGCAGCGAACGA 59.073 47.619 0.00 0.00 0.00 3.85
2734 5059 1.660607 ACAACATGATAGCAGCGAACG 59.339 47.619 0.00 0.00 0.00 3.95
2735 5060 3.372206 AGAACAACATGATAGCAGCGAAC 59.628 43.478 0.00 0.00 0.00 3.95
2736 5061 3.371898 CAGAACAACATGATAGCAGCGAA 59.628 43.478 0.00 0.00 0.00 4.70
2737 5062 2.931969 CAGAACAACATGATAGCAGCGA 59.068 45.455 0.00 0.00 0.00 4.93
2738 5063 2.674852 ACAGAACAACATGATAGCAGCG 59.325 45.455 0.00 0.00 0.00 5.18
2739 5064 4.691860 AACAGAACAACATGATAGCAGC 57.308 40.909 0.00 0.00 0.00 5.25
2740 5065 7.810658 AGTTAAACAGAACAACATGATAGCAG 58.189 34.615 0.00 0.00 0.00 4.24
2741 5066 7.744087 AGTTAAACAGAACAACATGATAGCA 57.256 32.000 0.00 0.00 0.00 3.49
2742 5067 8.905702 CAAAGTTAAACAGAACAACATGATAGC 58.094 33.333 0.00 0.00 0.00 2.97
2743 5068 9.950680 ACAAAGTTAAACAGAACAACATGATAG 57.049 29.630 0.00 0.00 0.00 2.08
2745 5070 9.301153 GAACAAAGTTAAACAGAACAACATGAT 57.699 29.630 0.00 0.00 0.00 2.45
2746 5071 8.300286 TGAACAAAGTTAAACAGAACAACATGA 58.700 29.630 0.00 0.00 0.00 3.07
2747 5072 8.459521 TGAACAAAGTTAAACAGAACAACATG 57.540 30.769 0.00 0.00 0.00 3.21
2748 5073 9.651913 AATGAACAAAGTTAAACAGAACAACAT 57.348 25.926 0.00 0.00 0.00 2.71
2819 5144 8.998377 TGATTTGAAGATAAGACAATTTCGACA 58.002 29.630 0.00 0.00 0.00 4.35
2829 5154 9.508567 GCTTAATTGGTGATTTGAAGATAAGAC 57.491 33.333 0.00 0.00 0.00 3.01
2830 5155 9.241919 TGCTTAATTGGTGATTTGAAGATAAGA 57.758 29.630 0.00 0.00 0.00 2.10
2864 5189 7.483307 TGAGAAAGGAGCATAATTTATTGCAC 58.517 34.615 9.49 4.32 0.00 4.57
2873 5198 9.118300 CAGAACTTAATGAGAAAGGAGCATAAT 57.882 33.333 0.00 0.00 0.00 1.28
3066 5394 5.931146 GCAGATAATTAGATGGAGTCACAGG 59.069 44.000 0.00 0.00 0.00 4.00
3100 5428 5.629133 GCTTATCAACATCACTTGGGGTCTA 60.629 44.000 0.00 0.00 0.00 2.59
3104 5432 3.624777 AGCTTATCAACATCACTTGGGG 58.375 45.455 0.00 0.00 0.00 4.96
3239 5567 4.249661 GGATCTAGCTTAATAGGCAGCAC 58.750 47.826 0.00 0.00 38.61 4.40
3241 5569 4.543590 TGGATCTAGCTTAATAGGCAGC 57.456 45.455 0.00 0.00 36.16 5.25
3292 5622 6.574832 CGACAATATTTCCTTATGCATCAACG 59.425 38.462 0.19 0.00 0.00 4.10
3296 5626 7.426929 ACTCGACAATATTTCCTTATGCATC 57.573 36.000 0.19 0.00 0.00 3.91
3299 5629 6.355638 CGAACTCGACAATATTTCCTTATGC 58.644 40.000 0.00 0.00 43.02 3.14
3319 5649 2.608090 GGTACAAAGCTATGAGCCGAAC 59.392 50.000 0.00 0.00 43.77 3.95
3336 5666 2.360801 ACAAAAGTGCATGTGTGGGTAC 59.639 45.455 0.00 0.00 0.00 3.34
3339 5669 1.682854 AGACAAAAGTGCATGTGTGGG 59.317 47.619 0.00 0.00 0.00 4.61
3426 5756 6.493458 AGCAGTGGAAGTAACAAATAACCATT 59.507 34.615 0.00 0.00 0.00 3.16
3429 5759 5.959618 AGCAGTGGAAGTAACAAATAACC 57.040 39.130 0.00 0.00 0.00 2.85
3474 5811 6.386927 AGTGGTGAAGGATGGAACTCATATAA 59.613 38.462 0.00 0.00 35.97 0.98
3481 5818 3.117512 ACAAAGTGGTGAAGGATGGAACT 60.118 43.478 0.00 0.00 0.00 3.01
3485 5822 5.070001 TCTAAACAAAGTGGTGAAGGATGG 58.930 41.667 0.00 0.00 0.00 3.51
3691 6028 8.995027 ATGGCATATTCTCCAATTTAACTACA 57.005 30.769 0.00 0.00 35.75 2.74
3731 6068 7.304735 TGAACACTACAATTTGATCAATTCCG 58.695 34.615 9.40 3.90 32.24 4.30
3748 6085 2.857186 TGGCAGCTGAATGAACACTA 57.143 45.000 20.43 0.00 0.00 2.74
3790 6127 9.726438 AATAGAGACAACAAGTTGCTAACTATT 57.274 29.630 12.54 16.20 44.03 1.73
3805 6142 4.953579 AGGACCAGAGAGAATAGAGACAAC 59.046 45.833 0.00 0.00 0.00 3.32
3829 6166 7.991084 CATATCATGGATGTACAAGGTCAAT 57.009 36.000 0.00 0.00 0.00 2.57
3911 6249 4.944962 TGTTGAAGACTTCACTTGTGTG 57.055 40.909 17.52 0.00 45.07 3.82
3921 6259 9.399797 TCATAAGATTATGCATGTTGAAGACTT 57.600 29.630 10.16 8.08 40.19 3.01
3940 6278 8.092068 TGTTCATCGGAGTAACTTTTCATAAGA 58.908 33.333 6.75 0.00 0.00 2.10
3994 6332 5.128499 TGAAATGTTTGTGATTGAACTGGGT 59.872 36.000 0.00 0.00 0.00 4.51
3996 6334 6.275335 AGTGAAATGTTTGTGATTGAACTGG 58.725 36.000 0.00 0.00 0.00 4.00
4022 6360 3.640967 AGCTCCAGCCTCTAAGTATTGAG 59.359 47.826 0.00 0.00 43.38 3.02
4039 6377 5.234543 GTGAAAATACGAATCACCTAGCTCC 59.765 44.000 0.00 0.00 37.97 4.70
4040 6378 6.275305 GTGAAAATACGAATCACCTAGCTC 57.725 41.667 0.00 0.00 37.97 4.09
4047 6385 3.438781 TGCCTGGTGAAAATACGAATCAC 59.561 43.478 0.00 0.00 42.08 3.06
4060 6398 2.108168 GGAGTACATAGTGCCTGGTGA 58.892 52.381 0.00 0.00 0.00 4.02
4070 6408 1.133575 TGGGACGGAGGGAGTACATAG 60.134 57.143 0.00 0.00 0.00 2.23
4081 6419 6.452494 ACGATCTTATAATATGGGACGGAG 57.548 41.667 0.00 0.00 0.00 4.63
4276 6614 1.442769 GAAGCCTCAGTCGCAAATCA 58.557 50.000 0.00 0.00 0.00 2.57
4390 6728 5.304614 AGAGAAAGACTGTAAACCTACTGCA 59.695 40.000 0.00 0.00 31.84 4.41
4601 6973 5.043737 AGTGGAAAGTTACCAAAGCACTA 57.956 39.130 0.00 0.00 39.22 2.74
4644 7016 3.118629 AGAGAACTGTCAGCACACAAGAA 60.119 43.478 0.00 0.00 0.00 2.52
4652 7024 5.478332 TCTCAGAATTAGAGAACTGTCAGCA 59.522 40.000 0.00 0.00 39.07 4.41
4793 7166 1.667756 GGCATCAACAGTGCACACATG 60.668 52.381 21.04 13.97 44.25 3.21
4815 7188 0.180406 AGCATCCGGTTGGTGGATAC 59.820 55.000 16.15 0.00 44.41 2.24
4878 7251 4.760530 AGCAAGATAACTAGCCATGTGA 57.239 40.909 0.00 0.00 0.00 3.58
5050 7437 7.095523 CGAGATGCATGACACACAATTATATCA 60.096 37.037 2.46 0.00 0.00 2.15
5110 7497 0.320421 TGACAAGCCCGTGAGCTAAC 60.320 55.000 0.00 0.00 44.11 2.34
5322 7811 9.085645 TCAGTTAAGAGTTCTCCTATGTAACAA 57.914 33.333 0.00 0.00 0.00 2.83
5482 7975 1.989864 CAACGAAAAATAAAGGCGGGC 59.010 47.619 0.00 0.00 0.00 6.13
5483 7976 3.291809 ACAACGAAAAATAAAGGCGGG 57.708 42.857 0.00 0.00 0.00 6.13
5627 8129 6.582677 AACTATCAGGATATTCAGAGGTCG 57.417 41.667 0.00 0.00 0.00 4.79
5631 8133 6.426328 GTGGCAAACTATCAGGATATTCAGAG 59.574 42.308 0.00 0.00 0.00 3.35
5722 8231 4.312443 TCCCAACGAGAAAGTGACATAAC 58.688 43.478 0.00 0.00 0.00 1.89
5835 8352 6.859112 AGATACAGGTGAGTGTGAAGTTAT 57.141 37.500 0.00 0.00 31.46 1.89
5940 8457 3.063180 GCTTGGTCTTCATCTCATGTTCG 59.937 47.826 0.00 0.00 0.00 3.95
5943 8460 2.356535 GGGCTTGGTCTTCATCTCATGT 60.357 50.000 0.00 0.00 0.00 3.21
5970 8487 1.651987 AGTTATTCACATGGCCGTCG 58.348 50.000 0.00 0.00 0.00 5.12
6026 8544 3.119101 GGGATAAGCAAGACGTCTGAAGA 60.119 47.826 20.85 4.34 0.00 2.87
6029 8547 2.166459 CTGGGATAAGCAAGACGTCTGA 59.834 50.000 20.85 2.80 0.00 3.27
6115 8639 1.134280 CCAGTCAATCGCTCCCTCATT 60.134 52.381 0.00 0.00 0.00 2.57
6136 8660 4.019321 TCTTTTGTTAGATCAGGGTCTGGG 60.019 45.833 0.00 0.00 31.51 4.45
6145 8669 5.707298 CAGCCTTTCCTCTTTTGTTAGATCA 59.293 40.000 0.00 0.00 0.00 2.92
6232 8756 2.888834 AGAAAGTTGCGGCACAAAAT 57.111 40.000 0.05 0.00 40.82 1.82
6267 8791 4.543692 GCACTACTGTACGGTGTATATGG 58.456 47.826 17.87 3.25 33.96 2.74
6268 8792 4.216731 CGCACTACTGTACGGTGTATATG 58.783 47.826 17.87 8.95 33.96 1.78
6269 8793 3.304257 GCGCACTACTGTACGGTGTATAT 60.304 47.826 17.87 0.00 33.85 0.86
6270 8794 2.032054 GCGCACTACTGTACGGTGTATA 59.968 50.000 17.87 0.00 33.85 1.47
6271 8795 1.202222 GCGCACTACTGTACGGTGTAT 60.202 52.381 17.87 0.00 33.85 2.29
6278 8807 1.411394 TCGTTTGCGCACTACTGTAC 58.589 50.000 11.12 0.00 38.14 2.90
6296 8825 7.148656 GCTCTTCTAATCTAATCCAAGCGATTC 60.149 40.741 0.00 0.00 40.51 2.52
6340 8870 4.774200 AGCAAGGGAAGTTCTGCAATTTAT 59.226 37.500 15.54 0.00 0.00 1.40
6363 8893 2.283821 GCACCCCTGGCATTTCCA 60.284 61.111 0.00 0.00 44.18 3.53
6389 8927 0.322816 TGTTTCCCAGCTGCATCTCC 60.323 55.000 8.66 0.00 0.00 3.71
6400 8938 4.715534 TTTCATCAGTAGGTGTTTCCCA 57.284 40.909 0.00 0.00 36.75 4.37
6406 8944 5.505181 AGTTCCATTTCATCAGTAGGTGT 57.495 39.130 0.00 0.00 0.00 4.16
6424 8967 4.413087 TTCGAAGATGCGAACTCTAGTTC 58.587 43.478 11.98 11.98 44.43 3.01
6442 8987 4.669842 AGCACAGCAGCGCTTCGA 62.670 61.111 7.50 0.00 36.40 3.71
6476 9028 6.598064 GCCAAACTATTTCCAGTTAAGAGCTA 59.402 38.462 0.00 0.00 37.78 3.32
6514 9074 7.768120 AGAAGATGAGGAAAACTGCTAATAGTG 59.232 37.037 0.00 0.00 0.00 2.74
6526 9086 8.210946 TGTTTACAGAAGAGAAGATGAGGAAAA 58.789 33.333 0.00 0.00 0.00 2.29
6527 9087 7.657761 GTGTTTACAGAAGAGAAGATGAGGAAA 59.342 37.037 0.00 0.00 0.00 3.13
6529 9089 6.267699 TGTGTTTACAGAAGAGAAGATGAGGA 59.732 38.462 0.00 0.00 31.91 3.71
6534 9094 4.686554 GCGTGTGTTTACAGAAGAGAAGAT 59.313 41.667 0.00 0.00 37.52 2.40
6536 9096 3.121328 CGCGTGTGTTTACAGAAGAGAAG 60.121 47.826 0.00 0.00 37.52 2.85
6554 9117 2.667318 CGTTTCATGGAGCACGCGT 61.667 57.895 5.58 5.58 0.00 6.01
6555 9118 2.096406 CGTTTCATGGAGCACGCG 59.904 61.111 3.53 3.53 0.00 6.01
6906 9477 2.661537 CTGCAAGGTCGCACGACA 60.662 61.111 23.10 3.09 46.20 4.35
7572 10149 1.598601 CCAAATGTTTGCAGTTGCCAC 59.401 47.619 1.06 0.00 45.88 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.