Multiple sequence alignment - TraesCS4D01G351500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G351500 chr4D 100.000 5333 0 0 1 5333 503360291 503354959 0.000000e+00 9849.0
1 TraesCS4D01G351500 chr4D 82.070 686 93 18 3944 4616 509828524 509827856 4.670000e-155 558.0
2 TraesCS4D01G351500 chr4D 96.063 127 5 0 2260 2386 54482110 54481984 1.950000e-49 207.0
3 TraesCS4D01G351500 chr4D 93.846 130 6 2 2256 2383 55352437 55352566 1.520000e-45 195.0
4 TraesCS4D01G351500 chr4D 79.283 251 31 11 946 1175 509831256 509831006 7.150000e-34 156.0
5 TraesCS4D01G351500 chr4D 85.600 125 12 3 1968 2086 509829926 509829802 5.610000e-25 126.0
6 TraesCS4D01G351500 chr4D 76.119 268 42 17 1162 1410 509830994 509830730 2.610000e-23 121.0
7 TraesCS4D01G351500 chr5A 89.326 1705 124 35 3143 4832 687692353 687690692 0.000000e+00 2087.0
8 TraesCS4D01G351500 chr5A 86.974 1021 58 30 849 1823 687694978 687693987 0.000000e+00 1079.0
9 TraesCS4D01G351500 chr5A 93.932 412 24 1 2639 3050 687692998 687692588 5.870000e-174 621.0
10 TraesCS4D01G351500 chr5A 83.281 640 81 15 3944 4573 698638345 698637722 2.790000e-157 566.0
11 TraesCS4D01G351500 chr5A 88.764 445 22 9 1822 2261 687693828 687693407 2.200000e-143 520.0
12 TraesCS4D01G351500 chr5A 81.498 681 66 17 1 656 687695813 687695168 6.160000e-139 505.0
13 TraesCS4D01G351500 chr5A 94.505 273 15 0 2374 2646 687693410 687693138 6.390000e-114 422.0
14 TraesCS4D01G351500 chr5A 88.788 330 30 4 4833 5155 687690628 687690299 1.080000e-106 398.0
15 TraesCS4D01G351500 chr5A 78.005 391 75 9 4834 5219 403016033 403016417 8.930000e-58 235.0
16 TraesCS4D01G351500 chr5A 95.935 123 5 0 2256 2378 446022452 446022574 3.260000e-47 200.0
17 TraesCS4D01G351500 chr5A 86.145 166 9 7 666 831 687695116 687694965 3.300000e-37 167.0
18 TraesCS4D01G351500 chr5A 79.487 234 38 9 1 230 415817087 415816860 1.990000e-34 158.0
19 TraesCS4D01G351500 chr5A 85.950 121 16 1 1059 1178 698641039 698640919 1.560000e-25 128.0
20 TraesCS4D01G351500 chr5A 76.772 254 42 14 1161 1410 698640907 698640667 5.610000e-25 126.0
21 TraesCS4D01G351500 chr5A 90.411 73 7 0 1668 1740 698640258 698640186 4.400000e-16 97.1
22 TraesCS4D01G351500 chr4B 88.876 1690 136 33 3144 4822 648500287 648498639 0.000000e+00 2032.0
23 TraesCS4D01G351500 chr4B 90.007 1381 76 22 466 1793 648503457 648502086 0.000000e+00 1729.0
24 TraesCS4D01G351500 chr4B 94.132 409 20 3 2738 3144 648500752 648500346 2.110000e-173 619.0
25 TraesCS4D01G351500 chr4B 90.045 442 19 7 1822 2261 648501613 648501195 2.810000e-152 549.0
26 TraesCS4D01G351500 chr4B 88.670 406 28 6 2 395 648506297 648505898 3.740000e-131 479.0
27 TraesCS4D01G351500 chr4B 78.213 638 95 23 3958 4573 656902319 656902934 8.440000e-98 368.0
28 TraesCS4D01G351500 chr4B 82.809 413 58 7 2654 3055 656901839 656902249 1.830000e-94 357.0
29 TraesCS4D01G351500 chr4B 88.259 247 19 6 2518 2754 648501015 648500769 2.430000e-73 287.0
30 TraesCS4D01G351500 chr4B 88.596 228 22 2 4828 5051 648498572 648498345 1.890000e-69 274.0
31 TraesCS4D01G351500 chr4B 76.295 502 73 29 946 1410 656899614 656900106 5.370000e-55 226.0
32 TraesCS4D01G351500 chr4B 91.250 160 12 1 2374 2533 648501198 648501041 3.230000e-52 217.0
33 TraesCS4D01G351500 chr4B 95.327 107 5 0 5049 5155 648333307 648333201 2.550000e-38 171.0
34 TraesCS4D01G351500 chr4B 88.073 109 13 0 1979 2087 656900921 656901029 4.330000e-26 130.0
35 TraesCS4D01G351500 chr5D 87.959 490 45 8 2667 3143 12871842 12871354 2.790000e-157 566.0
36 TraesCS4D01G351500 chr5D 86.567 469 51 5 2687 3143 528156818 528157286 1.710000e-139 507.0
37 TraesCS4D01G351500 chr5D 76.384 614 109 22 1 592 184449071 184449670 1.120000e-76 298.0
38 TraesCS4D01G351500 chr5D 93.750 128 8 0 2258 2385 558380233 558380106 5.450000e-45 193.0
39 TraesCS4D01G351500 chr2B 87.474 487 47 6 2669 3143 31630319 31629835 2.810000e-152 549.0
40 TraesCS4D01G351500 chr2B 85.193 493 55 9 2669 3143 795316292 795315800 1.730000e-134 490.0
41 TraesCS4D01G351500 chr2B 76.835 613 108 22 1 594 750535759 750536356 1.110000e-81 315.0
42 TraesCS4D01G351500 chr2B 79.718 355 51 14 1 340 25179724 25179376 2.480000e-58 237.0
43 TraesCS4D01G351500 chr2B 96.694 121 4 0 2259 2379 575148104 575147984 9.060000e-48 202.0
44 TraesCS4D01G351500 chr2B 92.857 56 4 0 3293 3348 776887236 776887291 1.230000e-11 82.4
45 TraesCS4D01G351500 chr2B 81.000 100 10 7 3306 3398 721728039 721728136 2.660000e-08 71.3
46 TraesCS4D01G351500 chr2A 86.858 487 52 5 2669 3143 20809923 20810409 7.860000e-148 534.0
47 TraesCS4D01G351500 chr2A 77.442 430 74 14 1 415 178936093 178935672 8.930000e-58 235.0
48 TraesCS4D01G351500 chr2A 95.902 122 5 0 2257 2378 78845692 78845571 1.170000e-46 198.0
49 TraesCS4D01G351500 chr2A 83.750 80 12 1 3795 3874 469063259 469063337 2.060000e-09 75.0
50 TraesCS4D01G351500 chr7A 86.037 487 55 6 2669 3143 193437377 193437862 1.320000e-140 510.0
51 TraesCS4D01G351500 chr7A 75.817 612 117 19 1 594 17537563 17538161 1.130000e-71 281.0
52 TraesCS4D01G351500 chr7A 94.444 54 3 0 3293 3346 201214584 201214637 3.420000e-12 84.2
53 TraesCS4D01G351500 chr2D 86.037 487 50 8 2669 3137 407455029 407455515 1.710000e-139 507.0
54 TraesCS4D01G351500 chr4A 84.221 507 60 8 2657 3143 657665954 657665448 4.830000e-130 475.0
55 TraesCS4D01G351500 chr4A 85.060 415 49 6 2667 3069 697708074 697708487 1.380000e-110 411.0
56 TraesCS4D01G351500 chr4A 76.046 526 91 18 83 592 10030715 10030209 1.920000e-59 241.0
57 TraesCS4D01G351500 chr4A 88.571 140 8 2 3141 3272 50890709 50890848 4.270000e-36 163.0
58 TraesCS4D01G351500 chr5B 84.232 482 60 10 2667 3135 170195495 170195017 6.300000e-124 455.0
59 TraesCS4D01G351500 chr5B 83.437 483 63 7 2667 3137 670355902 670355425 2.950000e-117 433.0
60 TraesCS4D01G351500 chr5B 72.886 343 68 19 3293 3617 533458888 533458553 1.580000e-15 95.3
61 TraesCS4D01G351500 chr3A 85.783 415 46 6 2667 3069 543983886 543983473 1.370000e-115 427.0
62 TraesCS4D01G351500 chr3A 76.384 614 108 24 1 594 665692666 665692070 4.040000e-76 296.0
63 TraesCS4D01G351500 chr3A 75.410 610 114 22 1 591 697166087 697165495 4.100000e-66 263.0
64 TraesCS4D01G351500 chr3A 79.325 237 40 8 1 234 170522705 170522475 1.990000e-34 158.0
65 TraesCS4D01G351500 chr3B 84.856 416 47 8 2667 3069 690515670 690515258 6.430000e-109 405.0
66 TraesCS4D01G351500 chr3B 76.547 614 108 25 1 594 316006362 316006959 2.410000e-78 303.0
67 TraesCS4D01G351500 chr3B 76.501 583 106 16 31 594 286560150 286560720 6.760000e-74 289.0
68 TraesCS4D01G351500 chrUn 75.980 612 116 19 1 595 22647384 22647981 2.430000e-73 287.0
69 TraesCS4D01G351500 chr6D 76.034 580 105 21 31 591 134611286 134610722 2.450000e-68 270.0
70 TraesCS4D01G351500 chr6D 75.952 578 107 20 31 591 135066468 135065906 8.800000e-68 268.0
71 TraesCS4D01G351500 chr6B 77.165 508 87 19 1 491 108215039 108215534 8.800000e-68 268.0
72 TraesCS4D01G351500 chr6B 88.321 137 8 2 3144 3272 6146095 6145959 1.990000e-34 158.0
73 TraesCS4D01G351500 chr6B 87.857 140 9 2 3141 3272 620274536 620274397 1.990000e-34 158.0
74 TraesCS4D01G351500 chr1D 75.214 585 112 18 31 594 418785907 418785335 4.130000e-61 246.0
75 TraesCS4D01G351500 chr1D 87.857 140 9 2 3141 3272 21731767 21731628 1.990000e-34 158.0
76 TraesCS4D01G351500 chr1D 92.727 55 2 2 3293 3346 105133435 105133382 1.590000e-10 78.7
77 TraesCS4D01G351500 chr6A 77.804 419 73 11 1 406 230345573 230345984 1.920000e-59 241.0
78 TraesCS4D01G351500 chr6A 96.639 119 4 0 2260 2378 147303660 147303778 1.170000e-46 198.0
79 TraesCS4D01G351500 chr6A 88.571 140 8 2 3141 3272 31919795 31919934 4.270000e-36 163.0
80 TraesCS4D01G351500 chr1A 96.721 122 4 0 2256 2377 208212529 208212650 2.520000e-48 204.0
81 TraesCS4D01G351500 chr1A 88.571 140 8 2 3141 3272 80619253 80619114 4.270000e-36 163.0
82 TraesCS4D01G351500 chr3D 93.284 134 8 1 2260 2392 581983589 581983722 4.210000e-46 196.0
83 TraesCS4D01G351500 chr7B 88.571 140 8 2 3141 3272 60993987 60994126 4.270000e-36 163.0
84 TraesCS4D01G351500 chr7B 91.228 57 3 2 3293 3348 124140274 124140329 5.730000e-10 76.8
85 TraesCS4D01G351500 chr1B 85.915 71 7 3 3293 3361 45349079 45349010 7.410000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G351500 chr4D 503354959 503360291 5332 True 9849.000 9849 100.000000 1 5333 1 chr4D.!!$R2 5332
1 TraesCS4D01G351500 chr4D 509827856 509831256 3400 True 240.250 558 80.768000 946 4616 4 chr4D.!!$R3 3670
2 TraesCS4D01G351500 chr5A 687690299 687695813 5514 True 724.875 2087 88.741500 1 5155 8 chr5A.!!$R2 5154
3 TraesCS4D01G351500 chr5A 698637722 698641039 3317 True 229.275 566 84.103500 1059 4573 4 chr5A.!!$R3 3514
4 TraesCS4D01G351500 chr4B 648498345 648506297 7952 True 773.250 2032 89.979375 2 5051 8 chr4B.!!$R2 5049
5 TraesCS4D01G351500 chr4B 656899614 656902934 3320 False 270.250 368 81.347500 946 4573 4 chr4B.!!$F1 3627
6 TraesCS4D01G351500 chr5D 184449071 184449670 599 False 298.000 298 76.384000 1 592 1 chr5D.!!$F1 591
7 TraesCS4D01G351500 chr2B 750535759 750536356 597 False 315.000 315 76.835000 1 594 1 chr2B.!!$F2 593
8 TraesCS4D01G351500 chr7A 17537563 17538161 598 False 281.000 281 75.817000 1 594 1 chr7A.!!$F1 593
9 TraesCS4D01G351500 chr4A 657665448 657665954 506 True 475.000 475 84.221000 2657 3143 1 chr4A.!!$R2 486
10 TraesCS4D01G351500 chr4A 10030209 10030715 506 True 241.000 241 76.046000 83 592 1 chr4A.!!$R1 509
11 TraesCS4D01G351500 chr3A 665692070 665692666 596 True 296.000 296 76.384000 1 594 1 chr3A.!!$R3 593
12 TraesCS4D01G351500 chr3A 697165495 697166087 592 True 263.000 263 75.410000 1 591 1 chr3A.!!$R4 590
13 TraesCS4D01G351500 chr3B 316006362 316006959 597 False 303.000 303 76.547000 1 594 1 chr3B.!!$F2 593
14 TraesCS4D01G351500 chr3B 286560150 286560720 570 False 289.000 289 76.501000 31 594 1 chr3B.!!$F1 563
15 TraesCS4D01G351500 chrUn 22647384 22647981 597 False 287.000 287 75.980000 1 595 1 chrUn.!!$F1 594
16 TraesCS4D01G351500 chr6D 134610722 134611286 564 True 270.000 270 76.034000 31 591 1 chr6D.!!$R1 560
17 TraesCS4D01G351500 chr6D 135065906 135066468 562 True 268.000 268 75.952000 31 591 1 chr6D.!!$R2 560
18 TraesCS4D01G351500 chr1D 418785335 418785907 572 True 246.000 246 75.214000 31 594 1 chr1D.!!$R3 563

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
988 3468 1.674651 TCCTCTCGTGTGTCCCTCG 60.675 63.158 0.00 0.0 0.00 4.63 F
1329 3886 0.321653 GCCACCGGAGTTTGACTCAT 60.322 55.000 9.46 0.0 46.79 2.90 F
2276 6034 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.0 0.00 3.46 F
2277 6035 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.0 0.00 2.29 F
4161 8454 0.242825 TCGGCTCACTGAACTTACCG 59.757 55.000 0.00 0.0 40.47 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2257 6015 0.038744 TTTCGGACGGAGGGAGTACT 59.961 55.000 0.00 0.00 0.00 2.73 R
3214 7489 0.601558 ATGCATACCCTAGCCGTACG 59.398 55.000 8.69 8.69 0.00 3.67 R
4039 8327 0.462759 GGACTGGATCAAAGGCTCCG 60.463 60.000 0.00 0.00 34.05 4.63 R
4227 8520 1.006102 CACGAACTTGACTCGCCCT 60.006 57.895 0.00 0.00 39.97 5.19 R
5231 9619 0.033601 TCCAACACCCAACAAGCAGT 60.034 50.000 0.00 0.00 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
119 120 5.310720 ACAAATATTTGCGAGGTTCTTCC 57.689 39.130 24.82 0.00 41.79 3.46
215 225 3.379240 TGGCAACATTGTTTGTCATTCG 58.621 40.909 0.00 0.00 46.17 3.34
407 2800 7.961325 TGTCACATATAATGATACAATGCGT 57.039 32.000 0.00 0.00 0.00 5.24
408 2801 8.376889 TGTCACATATAATGATACAATGCGTT 57.623 30.769 0.00 0.00 0.00 4.84
450 2860 9.932207 AAATCTGCATCTGTTTTGAATTTATGA 57.068 25.926 0.00 0.00 0.00 2.15
454 2864 5.516339 GCATCTGTTTTGAATTTATGACGGG 59.484 40.000 0.00 0.00 0.00 5.28
457 2867 7.045126 TCTGTTTTGAATTTATGACGGGTTT 57.955 32.000 0.00 0.00 0.00 3.27
495 2905 1.831106 TCAGGCATGACCATTCGTAGT 59.169 47.619 0.00 0.00 43.14 2.73
501 2911 2.973694 TGACCATTCGTAGTTAGGGC 57.026 50.000 0.00 0.00 0.00 5.19
534 2946 6.436847 TGCAAAAATCTTGGTGGATCTATGAA 59.563 34.615 0.00 0.00 0.00 2.57
729 3189 5.118203 GCGCTAAATATAAGGTCCGTAAGTG 59.882 44.000 0.00 0.00 0.00 3.16
730 3190 5.632347 CGCTAAATATAAGGTCCGTAAGTGG 59.368 44.000 0.00 0.00 0.00 4.00
733 3193 4.843220 ATATAAGGTCCGTAAGTGGTCG 57.157 45.455 0.00 0.00 0.00 4.79
870 3330 4.439057 AGTTGACTGACTTTTAGCGAACA 58.561 39.130 0.00 0.00 0.00 3.18
874 3334 2.223876 ACTGACTTTTAGCGAACACGGA 60.224 45.455 0.00 0.00 0.00 4.69
988 3468 1.674651 TCCTCTCGTGTGTCCCTCG 60.675 63.158 0.00 0.00 0.00 4.63
1069 3562 0.467290 CCTCCTCTTCCTCCTCCTCG 60.467 65.000 0.00 0.00 0.00 4.63
1153 3663 1.942657 CCGTCCATGGCTTATTGACTG 59.057 52.381 6.96 0.00 31.11 3.51
1155 3665 2.680805 CGTCCATGGCTTATTGACTGGT 60.681 50.000 6.96 0.00 31.11 4.00
1156 3666 3.356290 GTCCATGGCTTATTGACTGGTT 58.644 45.455 6.96 0.00 30.75 3.67
1159 3692 3.129287 CCATGGCTTATTGACTGGTTGAC 59.871 47.826 0.00 0.00 0.00 3.18
1169 3702 5.694231 TTGACTGGTTGACTGATTGATTG 57.306 39.130 0.00 0.00 0.00 2.67
1171 3704 4.074970 GACTGGTTGACTGATTGATTGGT 58.925 43.478 0.00 0.00 0.00 3.67
1184 3717 1.134401 TGATTGGTTCGAGCAGGGATC 60.134 52.381 0.53 0.00 0.00 3.36
1211 3744 4.908687 TGCACCGACAGCAGCGTT 62.909 61.111 0.00 0.00 37.02 4.84
1273 3810 1.087771 GGCCACTGCATGTACGTACC 61.088 60.000 22.43 8.27 40.13 3.34
1291 3831 6.171921 ACGTACCTAGATATGCGTCTTCTAT 58.828 40.000 0.00 0.00 0.00 1.98
1328 3885 1.070786 GCCACCGGAGTTTGACTCA 59.929 57.895 9.46 0.00 46.79 3.41
1329 3886 0.321653 GCCACCGGAGTTTGACTCAT 60.322 55.000 9.46 0.00 46.79 2.90
1331 3888 2.076863 CCACCGGAGTTTGACTCATTC 58.923 52.381 9.46 0.00 46.79 2.67
1336 3893 2.670414 CGGAGTTTGACTCATTCTGCTC 59.330 50.000 9.99 0.00 46.79 4.26
1338 3895 4.380973 CGGAGTTTGACTCATTCTGCTCTA 60.381 45.833 9.99 0.00 46.79 2.43
1466 4173 2.877043 GGCGATGATGATGCCTTTTT 57.123 45.000 0.00 0.00 45.40 1.94
1514 4228 8.794364 AGATAGATATTCATCATCCATGCCTA 57.206 34.615 0.00 0.00 33.21 3.93
1548 4266 3.634397 TTCTGCAGGTAAAGGAGATGG 57.366 47.619 15.13 0.00 33.36 3.51
1718 4537 1.090052 GGGCAGTGGTCGAGTATTGC 61.090 60.000 7.53 7.53 0.00 3.56
1895 5249 9.723601 AATGCCTTAAATTTAAGCTTTGATTGA 57.276 25.926 26.10 8.82 38.99 2.57
1896 5250 9.895138 ATGCCTTAAATTTAAGCTTTGATTGAT 57.105 25.926 26.10 10.22 38.99 2.57
1897 5251 9.369904 TGCCTTAAATTTAAGCTTTGATTGATC 57.630 29.630 26.10 5.65 38.99 2.92
1898 5252 9.369904 GCCTTAAATTTAAGCTTTGATTGATCA 57.630 29.630 26.10 0.00 38.99 2.92
1945 5311 6.083098 TGCTATTTGTTTGTTGTGCAGTAT 57.917 33.333 0.00 0.00 0.00 2.12
1947 5313 6.148948 GCTATTTGTTTGTTGTGCAGTATGA 58.851 36.000 0.00 0.00 39.69 2.15
1948 5314 6.306356 GCTATTTGTTTGTTGTGCAGTATGAG 59.694 38.462 0.00 0.00 39.69 2.90
1949 5315 5.826601 TTTGTTTGTTGTGCAGTATGAGA 57.173 34.783 0.00 0.00 39.69 3.27
1950 5316 6.389830 TTTGTTTGTTGTGCAGTATGAGAT 57.610 33.333 0.00 0.00 39.69 2.75
1951 5317 7.503521 TTTGTTTGTTGTGCAGTATGAGATA 57.496 32.000 0.00 0.00 39.69 1.98
1952 5318 7.686438 TTGTTTGTTGTGCAGTATGAGATAT 57.314 32.000 0.00 0.00 39.69 1.63
1953 5319 7.686438 TGTTTGTTGTGCAGTATGAGATATT 57.314 32.000 0.00 0.00 39.69 1.28
1954 5320 8.109705 TGTTTGTTGTGCAGTATGAGATATTT 57.890 30.769 0.00 0.00 39.69 1.40
1955 5321 8.575589 TGTTTGTTGTGCAGTATGAGATATTTT 58.424 29.630 0.00 0.00 39.69 1.82
1958 5324 7.905126 TGTTGTGCAGTATGAGATATTTTACG 58.095 34.615 0.00 0.00 39.69 3.18
1959 5325 7.011016 TGTTGTGCAGTATGAGATATTTTACGG 59.989 37.037 0.00 0.00 39.69 4.02
1960 5326 6.578944 TGTGCAGTATGAGATATTTTACGGT 58.421 36.000 0.00 0.00 39.69 4.83
1961 5327 6.478673 TGTGCAGTATGAGATATTTTACGGTG 59.521 38.462 0.00 0.00 39.69 4.94
1962 5328 5.465390 TGCAGTATGAGATATTTTACGGTGC 59.535 40.000 0.00 0.00 39.69 5.01
1963 5329 5.465390 GCAGTATGAGATATTTTACGGTGCA 59.535 40.000 0.00 0.00 39.69 4.57
2087 5460 6.156949 TCATTATCCCCAGCTAATATCCAGTC 59.843 42.308 0.00 0.00 0.00 3.51
2129 5887 4.330074 GTCTGATTACCTCCGAACATTGTG 59.670 45.833 0.00 0.00 0.00 3.33
2178 5936 4.406456 TCTGTGTTATTGTTGATGCCCTT 58.594 39.130 0.00 0.00 0.00 3.95
2245 6003 2.160205 GGCTTAGTCACTTCCCAAACC 58.840 52.381 0.00 0.00 0.00 3.27
2257 6015 0.899720 CCCAAACCCTAGTCGTGCTA 59.100 55.000 0.00 0.00 0.00 3.49
2258 6016 1.134788 CCCAAACCCTAGTCGTGCTAG 60.135 57.143 8.94 8.94 45.21 3.42
2259 6017 1.549170 CCAAACCCTAGTCGTGCTAGT 59.451 52.381 12.97 0.00 44.37 2.57
2260 6018 2.756760 CCAAACCCTAGTCGTGCTAGTA 59.243 50.000 12.97 0.00 44.37 1.82
2261 6019 3.428589 CCAAACCCTAGTCGTGCTAGTAC 60.429 52.174 0.08 0.08 44.37 2.73
2262 6020 3.362870 AACCCTAGTCGTGCTAGTACT 57.637 47.619 9.40 0.00 44.37 2.73
2263 6021 2.916640 ACCCTAGTCGTGCTAGTACTC 58.083 52.381 9.40 2.62 44.37 2.59
2264 6022 2.220313 CCCTAGTCGTGCTAGTACTCC 58.780 57.143 9.40 0.00 44.37 3.85
2265 6023 2.220313 CCTAGTCGTGCTAGTACTCCC 58.780 57.143 9.40 0.00 44.37 4.30
2266 6024 2.158784 CCTAGTCGTGCTAGTACTCCCT 60.159 54.545 9.40 4.62 44.37 4.20
2267 6025 2.041251 AGTCGTGCTAGTACTCCCTC 57.959 55.000 9.40 0.00 0.00 4.30
2268 6026 1.023502 GTCGTGCTAGTACTCCCTCC 58.976 60.000 9.40 0.00 0.00 4.30
2269 6027 0.463295 TCGTGCTAGTACTCCCTCCG 60.463 60.000 9.40 0.00 0.00 4.63
2270 6028 0.747283 CGTGCTAGTACTCCCTCCGT 60.747 60.000 9.40 0.00 0.00 4.69
2271 6029 1.023502 GTGCTAGTACTCCCTCCGTC 58.976 60.000 0.00 0.00 0.00 4.79
2272 6030 0.106819 TGCTAGTACTCCCTCCGTCC 60.107 60.000 0.00 0.00 0.00 4.79
2273 6031 1.165284 GCTAGTACTCCCTCCGTCCG 61.165 65.000 0.00 0.00 0.00 4.79
2274 6032 0.467384 CTAGTACTCCCTCCGTCCGA 59.533 60.000 0.00 0.00 0.00 4.55
2275 6033 0.911769 TAGTACTCCCTCCGTCCGAA 59.088 55.000 0.00 0.00 0.00 4.30
2276 6034 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
2277 6035 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
2278 6036 1.273327 GTACTCCCTCCGTCCGAAAAA 59.727 52.381 0.00 0.00 0.00 1.94
2298 6056 4.639135 AAACTTGTCTCAAGCTTGTTCC 57.361 40.909 25.19 14.15 0.00 3.62
2299 6057 3.567478 ACTTGTCTCAAGCTTGTTCCT 57.433 42.857 25.19 1.20 0.00 3.36
2300 6058 3.471680 ACTTGTCTCAAGCTTGTTCCTC 58.528 45.455 25.19 12.90 0.00 3.71
2301 6059 3.118261 ACTTGTCTCAAGCTTGTTCCTCA 60.118 43.478 25.19 15.00 0.00 3.86
2302 6060 3.558931 TGTCTCAAGCTTGTTCCTCAA 57.441 42.857 25.19 3.99 34.61 3.02
2303 6061 3.884895 TGTCTCAAGCTTGTTCCTCAAA 58.115 40.909 25.19 3.24 35.48 2.69
2304 6062 4.464008 TGTCTCAAGCTTGTTCCTCAAAT 58.536 39.130 25.19 0.00 35.48 2.32
2305 6063 4.276678 TGTCTCAAGCTTGTTCCTCAAATG 59.723 41.667 25.19 0.00 35.48 2.32
2306 6064 4.516698 GTCTCAAGCTTGTTCCTCAAATGA 59.483 41.667 25.19 1.20 35.48 2.57
2307 6065 5.009010 GTCTCAAGCTTGTTCCTCAAATGAA 59.991 40.000 25.19 1.02 35.48 2.57
2308 6066 5.771666 TCTCAAGCTTGTTCCTCAAATGAAT 59.228 36.000 25.19 0.00 35.48 2.57
2309 6067 5.775686 TCAAGCTTGTTCCTCAAATGAATG 58.224 37.500 25.19 0.00 35.48 2.67
2310 6068 5.302568 TCAAGCTTGTTCCTCAAATGAATGT 59.697 36.000 25.19 0.00 35.48 2.71
2311 6069 6.489700 TCAAGCTTGTTCCTCAAATGAATGTA 59.510 34.615 25.19 0.00 35.48 2.29
2312 6070 7.177216 TCAAGCTTGTTCCTCAAATGAATGTAT 59.823 33.333 25.19 0.00 35.48 2.29
2313 6071 7.093322 AGCTTGTTCCTCAAATGAATGTATC 57.907 36.000 0.00 0.00 35.48 2.24
2314 6072 6.888632 AGCTTGTTCCTCAAATGAATGTATCT 59.111 34.615 0.00 0.00 35.48 1.98
2315 6073 8.049117 AGCTTGTTCCTCAAATGAATGTATCTA 58.951 33.333 0.00 0.00 35.48 1.98
2316 6074 8.341173 GCTTGTTCCTCAAATGAATGTATCTAG 58.659 37.037 0.00 0.00 35.48 2.43
2317 6075 7.792374 TGTTCCTCAAATGAATGTATCTAGC 57.208 36.000 0.00 0.00 0.00 3.42
2318 6076 7.337938 TGTTCCTCAAATGAATGTATCTAGCA 58.662 34.615 0.00 0.00 0.00 3.49
2319 6077 7.280876 TGTTCCTCAAATGAATGTATCTAGCAC 59.719 37.037 0.00 0.00 0.00 4.40
2320 6078 7.129457 TCCTCAAATGAATGTATCTAGCACT 57.871 36.000 0.00 0.00 0.00 4.40
2321 6079 8.250143 TCCTCAAATGAATGTATCTAGCACTA 57.750 34.615 0.00 0.00 0.00 2.74
2322 6080 8.704668 TCCTCAAATGAATGTATCTAGCACTAA 58.295 33.333 0.00 0.00 0.00 2.24
2323 6081 8.768955 CCTCAAATGAATGTATCTAGCACTAAC 58.231 37.037 0.00 0.00 0.00 2.34
2324 6082 9.539825 CTCAAATGAATGTATCTAGCACTAACT 57.460 33.333 0.00 0.00 0.00 2.24
2325 6083 9.890629 TCAAATGAATGTATCTAGCACTAACTT 57.109 29.630 0.00 0.00 0.00 2.66
2326 6084 9.926751 CAAATGAATGTATCTAGCACTAACTTG 57.073 33.333 0.00 0.00 0.00 3.16
2327 6085 8.668510 AATGAATGTATCTAGCACTAACTTGG 57.331 34.615 0.00 0.00 0.00 3.61
2328 6086 7.182817 TGAATGTATCTAGCACTAACTTGGT 57.817 36.000 0.00 0.00 0.00 3.67
2329 6087 7.041721 TGAATGTATCTAGCACTAACTTGGTG 58.958 38.462 0.97 0.97 37.70 4.17
2341 6099 5.986135 CACTAACTTGGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
2342 6100 5.661312 ACTAACTTGGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
2343 6101 5.636903 AACTTGGTGCTAGATACATCCAT 57.363 39.130 0.00 0.00 0.00 3.41
2344 6102 5.636903 ACTTGGTGCTAGATACATCCATT 57.363 39.130 0.00 0.00 0.00 3.16
2345 6103 6.006275 ACTTGGTGCTAGATACATCCATTT 57.994 37.500 0.00 0.00 0.00 2.32
2346 6104 5.824624 ACTTGGTGCTAGATACATCCATTTG 59.175 40.000 0.00 0.00 0.00 2.32
2347 6105 5.628797 TGGTGCTAGATACATCCATTTGA 57.371 39.130 0.00 0.00 0.00 2.69
2348 6106 5.614308 TGGTGCTAGATACATCCATTTGAG 58.386 41.667 0.00 0.00 0.00 3.02
2349 6107 4.999950 GGTGCTAGATACATCCATTTGAGG 59.000 45.833 0.00 0.00 0.00 3.86
2350 6108 4.999950 GTGCTAGATACATCCATTTGAGGG 59.000 45.833 0.00 0.00 0.00 4.30
2351 6109 4.907269 TGCTAGATACATCCATTTGAGGGA 59.093 41.667 0.00 0.00 39.14 4.20
2352 6110 5.221722 TGCTAGATACATCCATTTGAGGGAC 60.222 44.000 0.00 0.00 37.23 4.46
2353 6111 5.221722 GCTAGATACATCCATTTGAGGGACA 60.222 44.000 0.00 0.00 37.23 4.02
2354 6112 5.715439 AGATACATCCATTTGAGGGACAA 57.285 39.130 0.00 0.00 37.23 3.18
2355 6113 5.688807 AGATACATCCATTTGAGGGACAAG 58.311 41.667 0.00 0.00 39.77 3.16
2356 6114 2.450476 ACATCCATTTGAGGGACAAGC 58.550 47.619 0.00 0.00 39.77 4.01
2357 6115 2.042162 ACATCCATTTGAGGGACAAGCT 59.958 45.455 0.00 0.00 39.77 3.74
2358 6116 2.978156 TCCATTTGAGGGACAAGCTT 57.022 45.000 0.00 0.00 39.77 3.74
2359 6117 3.243359 TCCATTTGAGGGACAAGCTTT 57.757 42.857 0.00 0.00 39.77 3.51
2360 6118 3.575805 TCCATTTGAGGGACAAGCTTTT 58.424 40.909 0.00 0.00 39.77 2.27
2361 6119 3.966665 TCCATTTGAGGGACAAGCTTTTT 59.033 39.130 0.00 0.00 39.77 1.94
2362 6120 4.039124 TCCATTTGAGGGACAAGCTTTTTC 59.961 41.667 0.00 0.00 39.77 2.29
2363 6121 4.202243 CCATTTGAGGGACAAGCTTTTTCA 60.202 41.667 0.00 0.00 39.77 2.69
2364 6122 4.654091 TTTGAGGGACAAGCTTTTTCAG 57.346 40.909 0.00 0.00 39.77 3.02
2365 6123 3.576078 TGAGGGACAAGCTTTTTCAGA 57.424 42.857 0.00 0.00 0.00 3.27
2366 6124 3.214328 TGAGGGACAAGCTTTTTCAGAC 58.786 45.455 0.00 0.00 0.00 3.51
2367 6125 2.222027 AGGGACAAGCTTTTTCAGACG 58.778 47.619 0.00 0.00 0.00 4.18
2368 6126 1.266989 GGGACAAGCTTTTTCAGACGG 59.733 52.381 0.00 0.00 0.00 4.79
2369 6127 2.218603 GGACAAGCTTTTTCAGACGGA 58.781 47.619 0.00 0.00 0.00 4.69
2370 6128 2.224314 GGACAAGCTTTTTCAGACGGAG 59.776 50.000 0.00 0.00 0.00 4.63
2372 6130 1.537202 CAAGCTTTTTCAGACGGAGGG 59.463 52.381 0.00 0.00 0.00 4.30
2382 6140 5.531122 TTCAGACGGAGGGAGTATTAATG 57.469 43.478 0.00 0.00 0.00 1.90
2458 6225 3.694566 GTGGTTACATCAAGATCCCAACC 59.305 47.826 8.81 8.81 35.58 3.77
2488 6257 5.199723 TGTATTGCATTTCTTGAGGCCATA 58.800 37.500 5.01 0.00 0.00 2.74
2572 6403 7.897575 TGAACTTTTAAATTGCTTGTTGTGT 57.102 28.000 0.00 0.00 0.00 3.72
2578 6409 7.897575 TTTAAATTGCTTGTTGTGTTGTTCT 57.102 28.000 0.00 0.00 0.00 3.01
2579 6410 8.988064 TTTAAATTGCTTGTTGTGTTGTTCTA 57.012 26.923 0.00 0.00 0.00 2.10
2723 6752 9.466497 AGAATTTTAAGTAGGCAATCTTGATGA 57.534 29.630 0.00 0.00 0.00 2.92
2972 7046 1.705186 AGGAAAGGTTCAGCAGCCTAA 59.295 47.619 0.00 0.00 34.15 2.69
3001 7078 6.808321 TTAGTACTGATCATGGTAAGGCTT 57.192 37.500 5.39 4.58 0.00 4.35
3043 7123 9.787532 ACATTTTGATCCACGTTCAAATATTAG 57.212 29.630 13.15 6.21 41.36 1.73
3137 7352 3.009723 TGCAGTGGGAATCGATTTTCTC 58.990 45.455 12.81 1.46 0.00 2.87
3214 7489 8.447053 ACCAAAACAACAAAATAACATGAACAC 58.553 29.630 0.00 0.00 0.00 3.32
3219 7494 6.629649 ACAACAAAATAACATGAACACGTACG 59.370 34.615 15.01 15.01 0.00 3.67
3251 7526 4.250464 TGCATTTAGTAGGTGTCTTTCCG 58.750 43.478 0.00 0.00 0.00 4.30
3273 7548 7.145985 TCCGTTTCGAAGATTCATAATAGAGG 58.854 38.462 0.00 0.00 35.04 3.69
3274 7549 6.924060 CCGTTTCGAAGATTCATAATAGAGGT 59.076 38.462 0.00 0.00 35.04 3.85
3406 7684 2.781174 ACCAACACCAGTTCTAGGGAAA 59.219 45.455 0.00 0.00 35.28 3.13
3415 7693 6.889722 CACCAGTTCTAGGGAAATCCATAAAA 59.110 38.462 1.22 0.00 38.24 1.52
3416 7694 7.561356 CACCAGTTCTAGGGAAATCCATAAAAT 59.439 37.037 1.22 0.00 38.24 1.82
3417 7695 8.122481 ACCAGTTCTAGGGAAATCCATAAAATT 58.878 33.333 1.22 0.00 38.24 1.82
3529 7808 2.772287 CTGAACCCTCCAAGACTGAAC 58.228 52.381 0.00 0.00 0.00 3.18
3530 7809 2.104792 CTGAACCCTCCAAGACTGAACA 59.895 50.000 0.00 0.00 0.00 3.18
3581 7860 2.615912 GTTTCTCTGCATCCATAGGTGC 59.384 50.000 0.00 0.00 41.61 5.01
3687 7967 4.228210 TGCCTCTTTTCCTCTCAACCATAT 59.772 41.667 0.00 0.00 0.00 1.78
3688 7968 5.428457 TGCCTCTTTTCCTCTCAACCATATA 59.572 40.000 0.00 0.00 0.00 0.86
3689 7969 6.101734 TGCCTCTTTTCCTCTCAACCATATAT 59.898 38.462 0.00 0.00 0.00 0.86
3690 7970 7.292356 TGCCTCTTTTCCTCTCAACCATATATA 59.708 37.037 0.00 0.00 0.00 0.86
3691 7971 7.821846 GCCTCTTTTCCTCTCAACCATATATAG 59.178 40.741 0.00 0.00 0.00 1.31
3725 8007 4.074970 CAACTAAGAGCAAATGGACACCT 58.925 43.478 0.00 0.00 0.00 4.00
3732 8014 4.287067 AGAGCAAATGGACACCTAGAAGAA 59.713 41.667 0.00 0.00 0.00 2.52
3782 8064 8.527127 GAGTATCACACATGGCACATAGATAGC 61.527 44.444 0.00 0.00 38.19 2.97
3795 8077 5.533903 CACATAGATAGCTGGGCAAGAAAAT 59.466 40.000 0.00 0.00 0.00 1.82
3796 8078 6.040166 CACATAGATAGCTGGGCAAGAAAATT 59.960 38.462 0.00 0.00 0.00 1.82
3832 8114 8.647796 TGAAGAAGATTCCTTGTGTTTACTCTA 58.352 33.333 0.00 0.00 31.62 2.43
3868 8150 7.864686 TGAGTCACACAAAAATCTTGTATCTG 58.135 34.615 0.00 0.00 0.00 2.90
3878 8160 5.752892 AATCTTGTATCTGAGCATTGCAG 57.247 39.130 11.91 0.18 34.71 4.41
3886 8168 2.030540 TCTGAGCATTGCAGCACTTTTC 60.031 45.455 11.91 0.00 36.85 2.29
3926 8208 4.382040 GCTCTGGTGCTTAATACAGACTGA 60.382 45.833 10.08 0.00 35.24 3.41
3974 8262 6.096846 CCTTACTGTTTTGCCCTAATATGCTT 59.903 38.462 0.00 0.00 0.00 3.91
4015 8303 1.219664 CCTCATACCGCGGGAAACA 59.780 57.895 31.76 8.21 0.00 2.83
4039 8327 5.258051 TCATGGTTTGGTTATTACCCTGAC 58.742 41.667 0.00 0.00 44.35 3.51
4069 8357 2.314852 TGATCCAGTCCTACCTCCTCAA 59.685 50.000 0.00 0.00 0.00 3.02
4107 8400 7.239763 TGTTCTTCATGTTGGACTAGTGATA 57.760 36.000 0.00 0.00 0.00 2.15
4117 8410 4.223144 TGGACTAGTGATATGGCTTAGCA 58.777 43.478 6.53 0.00 0.00 3.49
4138 8431 7.047460 AGCAAGTTGATGAAATTTTGAGTCT 57.953 32.000 7.16 0.00 0.00 3.24
4161 8454 0.242825 TCGGCTCACTGAACTTACCG 59.757 55.000 0.00 0.00 40.47 4.02
4224 8517 1.306141 TCTGAAGGCCCTGGACGAT 60.306 57.895 0.00 0.00 0.00 3.73
4227 8520 3.329542 GAAGGCCCTGGACGATGCA 62.330 63.158 0.00 0.00 0.00 3.96
4329 8622 1.522668 TGAAGGACAAACCATCTGCG 58.477 50.000 0.00 0.00 42.04 5.18
4335 8628 1.873591 GACAAACCATCTGCGTGACTT 59.126 47.619 0.00 0.00 0.00 3.01
4340 8633 0.803768 CCATCTGCGTGACTTCCTCG 60.804 60.000 0.00 0.00 35.12 4.63
4397 8691 2.125350 GCTCAGGCTGACGGGAAG 60.125 66.667 14.43 3.79 35.22 3.46
4398 8692 2.125350 CTCAGGCTGACGGGAAGC 60.125 66.667 14.43 0.00 40.06 3.86
4401 8695 1.377725 CAGGCTGACGGGAAGCATT 60.378 57.895 9.42 0.00 42.69 3.56
4414 8708 3.523791 GAAGCATTCCGGGGTACTCCC 62.524 61.905 6.09 7.78 45.81 4.30
4427 8721 3.862402 CTCCCTCGGTCGTCGACG 61.862 72.222 31.30 31.30 43.74 5.12
4488 8800 6.119536 TGGGTTGGTGTATATGTCATTCTTC 58.880 40.000 0.00 0.00 0.00 2.87
4489 8801 6.069673 TGGGTTGGTGTATATGTCATTCTTCT 60.070 38.462 0.00 0.00 0.00 2.85
4494 8806 9.685276 TTGGTGTATATGTCATTCTTCTTTCAT 57.315 29.630 0.00 0.00 0.00 2.57
4507 8823 4.581824 TCTTCTTTCATGCTTTGCTTCTGT 59.418 37.500 0.00 0.00 0.00 3.41
4515 8832 2.002586 GCTTTGCTTCTGTCATCGCTA 58.997 47.619 0.00 0.00 0.00 4.26
4516 8833 2.222908 GCTTTGCTTCTGTCATCGCTAC 60.223 50.000 0.00 0.00 0.00 3.58
4528 8845 3.003482 GTCATCGCTACGTAGAAGACCAT 59.997 47.826 26.53 6.97 31.29 3.55
4530 8847 5.001874 TCATCGCTACGTAGAAGACCATAT 58.998 41.667 26.53 6.30 0.00 1.78
4534 8851 5.472478 TCGCTACGTAGAAGACCATATCAAT 59.528 40.000 26.53 0.00 0.00 2.57
4578 8895 5.187186 AGGTTACATACATGTCCTTCTTCGT 59.813 40.000 0.00 0.00 41.97 3.85
4589 8906 9.449719 ACATGTCCTTCTTCGTAATATTTTCTT 57.550 29.630 0.00 0.00 0.00 2.52
4617 8934 8.902806 TGTTCATCTCAATACTTTGTTTCTTGT 58.097 29.630 0.00 0.00 34.32 3.16
4618 8935 9.736023 GTTCATCTCAATACTTTGTTTCTTGTT 57.264 29.630 0.00 0.00 34.32 2.83
4649 8966 1.538047 TGATTTGTGAGCTTCTGCCC 58.462 50.000 0.00 0.00 40.80 5.36
4679 8999 4.037803 TCAGCAGTGCAACAAAATACATGT 59.962 37.500 19.20 2.69 41.43 3.21
4682 9002 4.618489 GCAGTGCAACAAAATACATGTCTC 59.382 41.667 11.09 0.00 41.43 3.36
4687 9007 4.855388 GCAACAAAATACATGTCTCTGCTG 59.145 41.667 0.00 0.00 32.18 4.41
4708 9028 2.631160 TTTGATGACACCAACCGAGT 57.369 45.000 0.00 0.00 0.00 4.18
4767 9087 8.810652 TGCAGTAGAAACAAAATAATTCCAAC 57.189 30.769 0.00 0.00 0.00 3.77
4778 9098 9.912634 ACAAAATAATTCCAACACTACTTCATG 57.087 29.630 0.00 0.00 0.00 3.07
4787 9107 8.997621 TCCAACACTACTTCATGTACTAATTC 57.002 34.615 0.00 0.00 0.00 2.17
4807 9127 3.419943 TCAATGATGGTTGCTTAGCACA 58.580 40.909 6.34 2.72 38.71 4.57
4811 9131 3.076621 TGATGGTTGCTTAGCACAGAAG 58.923 45.455 6.34 0.00 38.71 2.85
4819 9139 2.744741 GCTTAGCACAGAAGGAAACCTC 59.255 50.000 0.00 0.00 30.89 3.85
4822 9142 2.050144 AGCACAGAAGGAAACCTCTGA 58.950 47.619 17.30 0.00 34.89 3.27
4824 9144 2.550180 GCACAGAAGGAAACCTCTGAAC 59.450 50.000 17.30 9.36 34.89 3.18
4825 9145 3.808728 CACAGAAGGAAACCTCTGAACA 58.191 45.455 17.30 0.00 34.89 3.18
4830 9211 2.576615 AGGAAACCTCTGAACAACAGC 58.423 47.619 0.00 0.00 45.38 4.40
4849 9230 4.142534 ACAGCAGAACATCAACACATATGC 60.143 41.667 1.58 0.00 0.00 3.14
4851 9232 3.789791 GCAGAACATCAACACATATGCCG 60.790 47.826 1.58 0.00 0.00 5.69
4864 9245 5.068987 ACACATATGCCGCCAGATTTTTAAT 59.931 36.000 1.58 0.00 0.00 1.40
4930 9311 5.500234 CCATCCAAATCTTCTTCCACTACA 58.500 41.667 0.00 0.00 0.00 2.74
4938 9319 9.350357 CAAATCTTCTTCCACTACAATCAAATG 57.650 33.333 0.00 0.00 0.00 2.32
4958 9339 8.260818 TCAAATGTGGGAAACAAAATGTTCTTA 58.739 29.630 0.00 0.00 43.61 2.10
5020 9408 9.455847 GCATCTTGGATAACAACAATAAGATTC 57.544 33.333 0.00 0.00 32.75 2.52
5024 9412 7.786178 TGGATAACAACAATAAGATTCGAGG 57.214 36.000 0.00 0.00 0.00 4.63
5029 9417 0.508641 CAATAAGATTCGAGGCCGCG 59.491 55.000 24.08 24.08 35.37 6.46
5034 9422 3.832720 GATTCGAGGCCGCGAGAGG 62.833 68.421 30.03 1.42 41.79 3.69
5047 9435 2.799917 CGCGAGAGGTAGGGATTGAAAG 60.800 54.545 0.00 0.00 0.00 2.62
5061 9449 7.408543 AGGGATTGAAAGAATCTCATCAAAGA 58.591 34.615 13.12 0.00 35.62 2.52
5067 9455 7.170277 TGAAAGAATCTCATCAAAGATGGTGA 58.830 34.615 7.11 6.62 44.38 4.02
5093 9481 6.012745 ACCATAGCTTCAAGGAGACAAAATT 58.987 36.000 0.00 0.00 0.00 1.82
5102 9490 5.474532 TCAAGGAGACAAAATTGTGGATCTG 59.525 40.000 3.05 0.00 42.43 2.90
5105 9493 4.156739 GGAGACAAAATTGTGGATCTGGAC 59.843 45.833 3.05 0.00 42.43 4.02
5157 9545 5.482686 CTTGATAGCAAGCTTCTTCCTTC 57.517 43.478 7.95 0.00 44.41 3.46
5158 9546 4.558226 TGATAGCAAGCTTCTTCCTTCA 57.442 40.909 0.00 0.00 0.00 3.02
5159 9547 4.910195 TGATAGCAAGCTTCTTCCTTCAA 58.090 39.130 0.00 0.00 0.00 2.69
5160 9548 5.503927 TGATAGCAAGCTTCTTCCTTCAAT 58.496 37.500 0.00 0.00 0.00 2.57
5161 9549 5.587844 TGATAGCAAGCTTCTTCCTTCAATC 59.412 40.000 0.00 0.00 0.00 2.67
5162 9550 4.031636 AGCAAGCTTCTTCCTTCAATCT 57.968 40.909 0.00 0.00 0.00 2.40
5163 9551 4.405548 AGCAAGCTTCTTCCTTCAATCTT 58.594 39.130 0.00 0.00 0.00 2.40
5164 9552 4.458642 AGCAAGCTTCTTCCTTCAATCTTC 59.541 41.667 0.00 0.00 0.00 2.87
5165 9553 4.380339 GCAAGCTTCTTCCTTCAATCTTCC 60.380 45.833 0.00 0.00 0.00 3.46
5166 9554 4.925390 AGCTTCTTCCTTCAATCTTCCT 57.075 40.909 0.00 0.00 0.00 3.36
5167 9555 6.176183 CAAGCTTCTTCCTTCAATCTTCCTA 58.824 40.000 0.00 0.00 0.00 2.94
5168 9556 6.573712 AGCTTCTTCCTTCAATCTTCCTAT 57.426 37.500 0.00 0.00 0.00 2.57
5169 9557 6.591001 AGCTTCTTCCTTCAATCTTCCTATC 58.409 40.000 0.00 0.00 0.00 2.08
5170 9558 6.386635 AGCTTCTTCCTTCAATCTTCCTATCT 59.613 38.462 0.00 0.00 0.00 1.98
5171 9559 7.053498 GCTTCTTCCTTCAATCTTCCTATCTT 58.947 38.462 0.00 0.00 0.00 2.40
5172 9560 7.555914 GCTTCTTCCTTCAATCTTCCTATCTTT 59.444 37.037 0.00 0.00 0.00 2.52
5173 9561 9.108284 CTTCTTCCTTCAATCTTCCTATCTTTC 57.892 37.037 0.00 0.00 0.00 2.62
5174 9562 7.569240 TCTTCCTTCAATCTTCCTATCTTTCC 58.431 38.462 0.00 0.00 0.00 3.13
5175 9563 6.253946 TCCTTCAATCTTCCTATCTTTCCC 57.746 41.667 0.00 0.00 0.00 3.97
5176 9564 5.973124 TCCTTCAATCTTCCTATCTTTCCCT 59.027 40.000 0.00 0.00 0.00 4.20
5177 9565 6.448387 TCCTTCAATCTTCCTATCTTTCCCTT 59.552 38.462 0.00 0.00 0.00 3.95
5178 9566 7.036571 TCCTTCAATCTTCCTATCTTTCCCTTT 60.037 37.037 0.00 0.00 0.00 3.11
5179 9567 7.284261 CCTTCAATCTTCCTATCTTTCCCTTTC 59.716 40.741 0.00 0.00 0.00 2.62
5180 9568 7.516450 TCAATCTTCCTATCTTTCCCTTTCT 57.484 36.000 0.00 0.00 0.00 2.52
5181 9569 7.569240 TCAATCTTCCTATCTTTCCCTTTCTC 58.431 38.462 0.00 0.00 0.00 2.87
5182 9570 7.404396 TCAATCTTCCTATCTTTCCCTTTCTCT 59.596 37.037 0.00 0.00 0.00 3.10
5183 9571 7.763564 ATCTTCCTATCTTTCCCTTTCTCTT 57.236 36.000 0.00 0.00 0.00 2.85
5184 9572 7.575499 TCTTCCTATCTTTCCCTTTCTCTTT 57.425 36.000 0.00 0.00 0.00 2.52
5185 9573 7.990055 TCTTCCTATCTTTCCCTTTCTCTTTT 58.010 34.615 0.00 0.00 0.00 2.27
5186 9574 7.885399 TCTTCCTATCTTTCCCTTTCTCTTTTG 59.115 37.037 0.00 0.00 0.00 2.44
5187 9575 6.485171 TCCTATCTTTCCCTTTCTCTTTTGG 58.515 40.000 0.00 0.00 0.00 3.28
5188 9576 6.045577 TCCTATCTTTCCCTTTCTCTTTTGGT 59.954 38.462 0.00 0.00 0.00 3.67
5189 9577 6.721668 CCTATCTTTCCCTTTCTCTTTTGGTT 59.278 38.462 0.00 0.00 0.00 3.67
5190 9578 7.233553 CCTATCTTTCCCTTTCTCTTTTGGTTT 59.766 37.037 0.00 0.00 0.00 3.27
5191 9579 6.465439 TCTTTCCCTTTCTCTTTTGGTTTC 57.535 37.500 0.00 0.00 0.00 2.78
5192 9580 6.194967 TCTTTCCCTTTCTCTTTTGGTTTCT 58.805 36.000 0.00 0.00 0.00 2.52
5193 9581 6.321435 TCTTTCCCTTTCTCTTTTGGTTTCTC 59.679 38.462 0.00 0.00 0.00 2.87
5194 9582 5.388599 TCCCTTTCTCTTTTGGTTTCTCT 57.611 39.130 0.00 0.00 0.00 3.10
5195 9583 5.766590 TCCCTTTCTCTTTTGGTTTCTCTT 58.233 37.500 0.00 0.00 0.00 2.85
5196 9584 6.194967 TCCCTTTCTCTTTTGGTTTCTCTTT 58.805 36.000 0.00 0.00 0.00 2.52
5197 9585 6.667848 TCCCTTTCTCTTTTGGTTTCTCTTTT 59.332 34.615 0.00 0.00 0.00 2.27
5198 9586 6.980978 CCCTTTCTCTTTTGGTTTCTCTTTTC 59.019 38.462 0.00 0.00 0.00 2.29
5199 9587 7.147828 CCCTTTCTCTTTTGGTTTCTCTTTTCT 60.148 37.037 0.00 0.00 0.00 2.52
5200 9588 8.253810 CCTTTCTCTTTTGGTTTCTCTTTTCTT 58.746 33.333 0.00 0.00 0.00 2.52
5201 9589 9.295214 CTTTCTCTTTTGGTTTCTCTTTTCTTC 57.705 33.333 0.00 0.00 0.00 2.87
5202 9590 8.581253 TTCTCTTTTGGTTTCTCTTTTCTTCT 57.419 30.769 0.00 0.00 0.00 2.85
5203 9591 8.214721 TCTCTTTTGGTTTCTCTTTTCTTCTC 57.785 34.615 0.00 0.00 0.00 2.87
5204 9592 7.283354 TCTCTTTTGGTTTCTCTTTTCTTCTCC 59.717 37.037 0.00 0.00 0.00 3.71
5205 9593 6.889722 TCTTTTGGTTTCTCTTTTCTTCTCCA 59.110 34.615 0.00 0.00 0.00 3.86
5206 9594 7.396055 TCTTTTGGTTTCTCTTTTCTTCTCCAA 59.604 33.333 0.00 0.00 0.00 3.53
5207 9595 7.660030 TTTGGTTTCTCTTTTCTTCTCCAAT 57.340 32.000 0.00 0.00 33.46 3.16
5208 9596 6.639632 TGGTTTCTCTTTTCTTCTCCAATG 57.360 37.500 0.00 0.00 0.00 2.82
5209 9597 5.536161 TGGTTTCTCTTTTCTTCTCCAATGG 59.464 40.000 0.00 0.00 0.00 3.16
5210 9598 5.770162 GGTTTCTCTTTTCTTCTCCAATGGA 59.230 40.000 0.48 0.48 0.00 3.41
5219 9607 2.772739 CTCCAATGGAGGCTCAACG 58.227 57.895 21.25 0.00 45.43 4.10
5220 9608 0.745845 CTCCAATGGAGGCTCAACGG 60.746 60.000 21.25 9.80 45.43 4.44
5221 9609 1.198094 TCCAATGGAGGCTCAACGGA 61.198 55.000 17.69 12.12 0.00 4.69
5222 9610 1.026718 CCAATGGAGGCTCAACGGAC 61.027 60.000 17.69 0.00 0.00 4.79
5223 9611 0.321564 CAATGGAGGCTCAACGGACA 60.322 55.000 17.69 3.99 0.00 4.02
5224 9612 0.620556 AATGGAGGCTCAACGGACAT 59.379 50.000 17.69 6.35 0.00 3.06
5225 9613 0.620556 ATGGAGGCTCAACGGACATT 59.379 50.000 17.69 0.00 0.00 2.71
5226 9614 0.400213 TGGAGGCTCAACGGACATTT 59.600 50.000 17.69 0.00 0.00 2.32
5227 9615 1.202879 TGGAGGCTCAACGGACATTTT 60.203 47.619 17.69 0.00 0.00 1.82
5228 9616 1.468914 GGAGGCTCAACGGACATTTTC 59.531 52.381 17.69 0.00 0.00 2.29
5229 9617 2.151202 GAGGCTCAACGGACATTTTCA 58.849 47.619 10.25 0.00 0.00 2.69
5230 9618 1.880027 AGGCTCAACGGACATTTTCAC 59.120 47.619 0.00 0.00 0.00 3.18
5231 9619 1.606668 GGCTCAACGGACATTTTCACA 59.393 47.619 0.00 0.00 0.00 3.58
5232 9620 2.604614 GGCTCAACGGACATTTTCACAC 60.605 50.000 0.00 0.00 0.00 3.82
5233 9621 2.290641 GCTCAACGGACATTTTCACACT 59.709 45.455 0.00 0.00 0.00 3.55
5234 9622 3.849645 GCTCAACGGACATTTTCACACTG 60.850 47.826 0.00 0.00 0.00 3.66
5235 9623 2.032799 TCAACGGACATTTTCACACTGC 59.967 45.455 0.00 0.00 0.00 4.40
5236 9624 1.967319 ACGGACATTTTCACACTGCT 58.033 45.000 0.00 0.00 0.00 4.24
5237 9625 2.297701 ACGGACATTTTCACACTGCTT 58.702 42.857 0.00 0.00 0.00 3.91
5238 9626 2.033299 ACGGACATTTTCACACTGCTTG 59.967 45.455 0.00 0.00 0.00 4.01
5239 9627 2.033299 CGGACATTTTCACACTGCTTGT 59.967 45.455 0.00 0.00 39.97 3.16
5240 9628 3.489059 CGGACATTTTCACACTGCTTGTT 60.489 43.478 0.00 0.00 35.67 2.83
5241 9629 3.798337 GGACATTTTCACACTGCTTGTTG 59.202 43.478 0.00 0.00 35.67 3.33
5242 9630 3.784338 ACATTTTCACACTGCTTGTTGG 58.216 40.909 0.00 0.00 35.67 3.77
5243 9631 2.957491 TTTTCACACTGCTTGTTGGG 57.043 45.000 0.00 0.00 35.67 4.12
5244 9632 1.846007 TTTCACACTGCTTGTTGGGT 58.154 45.000 0.00 0.00 35.67 4.51
5245 9633 1.102154 TTCACACTGCTTGTTGGGTG 58.898 50.000 0.00 0.00 35.67 4.61
5246 9634 0.034574 TCACACTGCTTGTTGGGTGT 60.035 50.000 0.00 0.00 42.60 4.16
5247 9635 0.817013 CACACTGCTTGTTGGGTGTT 59.183 50.000 0.00 0.00 40.34 3.32
5248 9636 0.817013 ACACTGCTTGTTGGGTGTTG 59.183 50.000 0.00 0.00 39.47 3.33
5249 9637 0.102844 CACTGCTTGTTGGGTGTTGG 59.897 55.000 0.00 0.00 0.00 3.77
5250 9638 0.033601 ACTGCTTGTTGGGTGTTGGA 60.034 50.000 0.00 0.00 0.00 3.53
5251 9639 1.331214 CTGCTTGTTGGGTGTTGGAT 58.669 50.000 0.00 0.00 0.00 3.41
5252 9640 1.000060 CTGCTTGTTGGGTGTTGGATG 60.000 52.381 0.00 0.00 0.00 3.51
5253 9641 0.318120 GCTTGTTGGGTGTTGGATGG 59.682 55.000 0.00 0.00 0.00 3.51
5254 9642 0.968405 CTTGTTGGGTGTTGGATGGG 59.032 55.000 0.00 0.00 0.00 4.00
5255 9643 0.558220 TTGTTGGGTGTTGGATGGGA 59.442 50.000 0.00 0.00 0.00 4.37
5256 9644 0.783206 TGTTGGGTGTTGGATGGGAT 59.217 50.000 0.00 0.00 0.00 3.85
5257 9645 1.185315 GTTGGGTGTTGGATGGGATG 58.815 55.000 0.00 0.00 0.00 3.51
5258 9646 0.040942 TTGGGTGTTGGATGGGATGG 59.959 55.000 0.00 0.00 0.00 3.51
5259 9647 1.145900 TGGGTGTTGGATGGGATGGT 61.146 55.000 0.00 0.00 0.00 3.55
5260 9648 0.923358 GGGTGTTGGATGGGATGGTA 59.077 55.000 0.00 0.00 0.00 3.25
5261 9649 1.286553 GGGTGTTGGATGGGATGGTAA 59.713 52.381 0.00 0.00 0.00 2.85
5262 9650 2.291930 GGGTGTTGGATGGGATGGTAAA 60.292 50.000 0.00 0.00 0.00 2.01
5263 9651 3.436243 GGTGTTGGATGGGATGGTAAAA 58.564 45.455 0.00 0.00 0.00 1.52
5264 9652 3.194755 GGTGTTGGATGGGATGGTAAAAC 59.805 47.826 0.00 0.00 0.00 2.43
5265 9653 3.829601 GTGTTGGATGGGATGGTAAAACA 59.170 43.478 0.00 0.00 0.00 2.83
5266 9654 4.466015 GTGTTGGATGGGATGGTAAAACAT 59.534 41.667 0.00 0.00 0.00 2.71
5267 9655 4.709397 TGTTGGATGGGATGGTAAAACATC 59.291 41.667 0.00 0.00 45.05 3.06
5275 9663 2.911552 TGGTAAAACATCCCCCTTCC 57.088 50.000 0.00 0.00 0.00 3.46
5276 9664 1.359818 TGGTAAAACATCCCCCTTCCC 59.640 52.381 0.00 0.00 0.00 3.97
5277 9665 1.644337 GGTAAAACATCCCCCTTCCCT 59.356 52.381 0.00 0.00 0.00 4.20
5278 9666 2.357881 GGTAAAACATCCCCCTTCCCTC 60.358 54.545 0.00 0.00 0.00 4.30
5279 9667 1.466858 AAAACATCCCCCTTCCCTCA 58.533 50.000 0.00 0.00 0.00 3.86
5280 9668 1.698874 AAACATCCCCCTTCCCTCAT 58.301 50.000 0.00 0.00 0.00 2.90
5281 9669 0.929244 AACATCCCCCTTCCCTCATG 59.071 55.000 0.00 0.00 0.00 3.07
5282 9670 0.253820 ACATCCCCCTTCCCTCATGT 60.254 55.000 0.00 0.00 0.00 3.21
5283 9671 0.184451 CATCCCCCTTCCCTCATGTG 59.816 60.000 0.00 0.00 0.00 3.21
5284 9672 1.649271 ATCCCCCTTCCCTCATGTGC 61.649 60.000 0.00 0.00 0.00 4.57
5285 9673 2.615465 CCCCCTTCCCTCATGTGCA 61.615 63.158 0.00 0.00 0.00 4.57
5286 9674 1.383799 CCCCTTCCCTCATGTGCAA 59.616 57.895 0.00 0.00 0.00 4.08
5287 9675 0.251742 CCCCTTCCCTCATGTGCAAA 60.252 55.000 0.00 0.00 0.00 3.68
5288 9676 1.180029 CCCTTCCCTCATGTGCAAAG 58.820 55.000 0.00 0.00 0.00 2.77
5289 9677 1.548582 CCCTTCCCTCATGTGCAAAGT 60.549 52.381 0.00 0.00 0.00 2.66
5290 9678 1.815003 CCTTCCCTCATGTGCAAAGTC 59.185 52.381 0.00 0.00 0.00 3.01
5291 9679 1.815003 CTTCCCTCATGTGCAAAGTCC 59.185 52.381 0.00 0.00 0.00 3.85
5292 9680 0.770499 TCCCTCATGTGCAAAGTCCA 59.230 50.000 0.00 0.00 0.00 4.02
5293 9681 1.144708 TCCCTCATGTGCAAAGTCCAA 59.855 47.619 0.00 0.00 0.00 3.53
5294 9682 1.962807 CCCTCATGTGCAAAGTCCAAA 59.037 47.619 0.00 0.00 0.00 3.28
5295 9683 2.364970 CCCTCATGTGCAAAGTCCAAAA 59.635 45.455 0.00 0.00 0.00 2.44
5296 9684 3.007182 CCCTCATGTGCAAAGTCCAAAAT 59.993 43.478 0.00 0.00 0.00 1.82
5297 9685 4.220382 CCCTCATGTGCAAAGTCCAAAATA 59.780 41.667 0.00 0.00 0.00 1.40
5298 9686 5.279406 CCCTCATGTGCAAAGTCCAAAATAA 60.279 40.000 0.00 0.00 0.00 1.40
5299 9687 5.634859 CCTCATGTGCAAAGTCCAAAATAAC 59.365 40.000 0.00 0.00 0.00 1.89
5300 9688 5.537188 TCATGTGCAAAGTCCAAAATAACC 58.463 37.500 0.00 0.00 0.00 2.85
5301 9689 5.304101 TCATGTGCAAAGTCCAAAATAACCT 59.696 36.000 0.00 0.00 0.00 3.50
5302 9690 6.491745 TCATGTGCAAAGTCCAAAATAACCTA 59.508 34.615 0.00 0.00 0.00 3.08
5303 9691 6.909550 TGTGCAAAGTCCAAAATAACCTAT 57.090 33.333 0.00 0.00 0.00 2.57
5304 9692 6.686630 TGTGCAAAGTCCAAAATAACCTATG 58.313 36.000 0.00 0.00 0.00 2.23
5305 9693 6.266558 TGTGCAAAGTCCAAAATAACCTATGT 59.733 34.615 0.00 0.00 0.00 2.29
5306 9694 7.151976 GTGCAAAGTCCAAAATAACCTATGTT 58.848 34.615 0.00 0.00 38.52 2.71
5307 9695 8.301002 GTGCAAAGTCCAAAATAACCTATGTTA 58.699 33.333 0.00 0.00 41.03 2.41
5308 9696 8.301002 TGCAAAGTCCAAAATAACCTATGTTAC 58.699 33.333 0.00 0.00 39.66 2.50
5309 9697 8.301002 GCAAAGTCCAAAATAACCTATGTTACA 58.699 33.333 0.00 0.00 39.66 2.41
5312 9700 8.344446 AGTCCAAAATAACCTATGTTACAACC 57.656 34.615 0.00 0.00 39.66 3.77
5313 9701 7.395206 AGTCCAAAATAACCTATGTTACAACCC 59.605 37.037 0.00 0.00 39.66 4.11
5314 9702 7.395206 GTCCAAAATAACCTATGTTACAACCCT 59.605 37.037 0.00 0.00 39.66 4.34
5315 9703 8.613034 TCCAAAATAACCTATGTTACAACCCTA 58.387 33.333 0.00 0.00 39.66 3.53
5316 9704 8.680001 CCAAAATAACCTATGTTACAACCCTAC 58.320 37.037 0.00 0.00 39.66 3.18
5317 9705 9.457436 CAAAATAACCTATGTTACAACCCTACT 57.543 33.333 0.00 0.00 39.66 2.57
5318 9706 9.457436 AAAATAACCTATGTTACAACCCTACTG 57.543 33.333 0.00 0.00 39.66 2.74
5319 9707 5.431179 AACCTATGTTACAACCCTACTGG 57.569 43.478 0.00 0.00 34.43 4.00
5320 9708 4.226620 AACCTATGTTACAACCCTACTGGG 59.773 45.833 0.00 0.00 45.70 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 6.096987 TGCAAACTTGGACCACTACATTTAAA 59.903 34.615 0.00 0.00 0.00 1.52
72 73 5.594725 TGCAAACTTGGACCACTACATTTAA 59.405 36.000 0.00 0.00 0.00 1.52
73 74 5.133941 TGCAAACTTGGACCACTACATTTA 58.866 37.500 0.00 0.00 0.00 1.40
168 178 5.115480 GGAAGTTTTCATTTCCTTGCACAA 58.885 37.500 0.00 0.00 39.78 3.33
177 187 5.584251 TGTTGCCAAAGGAAGTTTTCATTTC 59.416 36.000 0.00 0.00 41.19 2.17
215 225 8.095937 TCAAATGATCTCAAGTATGCATCATC 57.904 34.615 0.19 0.00 36.25 2.92
277 298 6.259550 AGATTCATGGCTTACAAGTCAAAC 57.740 37.500 0.00 0.00 44.82 2.93
424 2817 9.932207 TCATAAATTCAAAACAGATGCAGATTT 57.068 25.926 0.00 0.00 0.00 2.17
425 2818 9.362539 GTCATAAATTCAAAACAGATGCAGATT 57.637 29.630 0.00 0.00 0.00 2.40
426 2819 7.699391 CGTCATAAATTCAAAACAGATGCAGAT 59.301 33.333 0.00 0.00 0.00 2.90
430 2823 5.516339 CCCGTCATAAATTCAAAACAGATGC 59.484 40.000 0.00 0.00 0.00 3.91
431 2824 6.620678 ACCCGTCATAAATTCAAAACAGATG 58.379 36.000 0.00 0.00 0.00 2.90
450 2860 5.110598 GTTTTGACCACATTTTAAACCCGT 58.889 37.500 0.00 0.00 0.00 5.28
454 2864 6.020201 CCTGACGTTTTGACCACATTTTAAAC 60.020 38.462 0.00 0.00 0.00 2.01
457 2867 4.498345 GCCTGACGTTTTGACCACATTTTA 60.498 41.667 0.00 0.00 0.00 1.52
495 2905 9.598517 CAAGATTTTTGCATTATTAAGCCCTAA 57.401 29.630 0.00 0.00 0.00 2.69
501 2911 9.603921 ATCCACCAAGATTTTTGCATTATTAAG 57.396 29.630 0.00 0.00 0.00 1.85
620 3038 2.222027 CAGTTGTCCTTCCACCAAGAC 58.778 52.381 0.00 0.00 33.29 3.01
733 3193 1.071605 CAGCTGGTGTCGCTTTCTAC 58.928 55.000 5.57 0.00 35.07 2.59
857 3317 3.102052 TCTTCCGTGTTCGCTAAAAGT 57.898 42.857 0.00 0.00 35.54 2.66
901 3365 7.541916 AAAGACCTTCTAGCAAGTAGTACTT 57.458 36.000 9.85 9.85 39.39 2.24
908 3372 7.760340 CGAACTTATAAAGACCTTCTAGCAAGT 59.240 37.037 0.00 0.00 0.00 3.16
916 3380 6.183360 CGGTGTTCGAACTTATAAAGACCTTC 60.183 42.308 27.32 3.51 42.43 3.46
1153 3663 3.751175 TCGAACCAATCAATCAGTCAACC 59.249 43.478 0.00 0.00 0.00 3.77
1155 3665 3.436704 GCTCGAACCAATCAATCAGTCAA 59.563 43.478 0.00 0.00 0.00 3.18
1156 3666 3.002791 GCTCGAACCAATCAATCAGTCA 58.997 45.455 0.00 0.00 0.00 3.41
1159 3692 2.353889 CCTGCTCGAACCAATCAATCAG 59.646 50.000 0.00 0.00 0.00 2.90
1169 3702 2.107141 CCGATCCCTGCTCGAACC 59.893 66.667 0.00 0.00 38.38 3.62
1171 3704 3.154473 CCCCGATCCCTGCTCGAA 61.154 66.667 0.00 0.00 38.38 3.71
1263 3796 5.243981 AGACGCATATCTAGGTACGTACAT 58.756 41.667 26.02 22.06 33.31 2.29
1273 3810 4.400884 AGGGCATAGAAGACGCATATCTAG 59.599 45.833 0.00 0.00 0.00 2.43
1315 3872 2.670414 GAGCAGAATGAGTCAAACTCCG 59.330 50.000 0.00 0.00 44.44 4.63
1328 3885 2.232452 ACACAAGCGAGTAGAGCAGAAT 59.768 45.455 0.00 0.00 37.01 2.40
1329 3886 1.613925 ACACAAGCGAGTAGAGCAGAA 59.386 47.619 0.00 0.00 37.01 3.02
1331 3888 1.989165 GAACACAAGCGAGTAGAGCAG 59.011 52.381 0.00 0.00 37.01 4.24
1336 3893 3.560902 TCTCTGAACACAAGCGAGTAG 57.439 47.619 0.00 0.00 0.00 2.57
1338 3895 2.890808 TTCTCTGAACACAAGCGAGT 57.109 45.000 0.00 0.00 0.00 4.18
1397 3954 3.873361 CACATGATATCAGCCTGTTCGTT 59.127 43.478 11.78 0.00 0.00 3.85
1514 4228 4.342092 ACCTGCAGAAACAAATTAGCAAGT 59.658 37.500 17.39 0.00 33.38 3.16
1548 4266 2.351336 TAGCCGCCGCTTAGCTCTTC 62.351 60.000 4.51 0.00 45.55 2.87
1718 4537 1.521457 CACCGGTGGTCCATCATCG 60.521 63.158 27.57 0.00 40.59 3.84
1895 5249 3.296854 TGCGACCCTACTGATAACTGAT 58.703 45.455 0.00 0.00 0.00 2.90
1896 5250 2.688446 CTGCGACCCTACTGATAACTGA 59.312 50.000 0.00 0.00 0.00 3.41
1897 5251 2.688446 TCTGCGACCCTACTGATAACTG 59.312 50.000 0.00 0.00 0.00 3.16
1898 5252 2.952978 CTCTGCGACCCTACTGATAACT 59.047 50.000 0.00 0.00 0.00 2.24
1899 5253 2.950309 TCTCTGCGACCCTACTGATAAC 59.050 50.000 0.00 0.00 0.00 1.89
1900 5254 3.292492 TCTCTGCGACCCTACTGATAA 57.708 47.619 0.00 0.00 0.00 1.75
1901 5255 3.292492 TTCTCTGCGACCCTACTGATA 57.708 47.619 0.00 0.00 0.00 2.15
1929 5295 7.686438 AATATCTCATACTGCACAACAAACA 57.314 32.000 0.00 0.00 0.00 2.83
1934 5300 7.011109 ACCGTAAAATATCTCATACTGCACAAC 59.989 37.037 0.00 0.00 0.00 3.32
1945 5311 9.719355 AATACATATGCACCGTAAAATATCTCA 57.281 29.630 1.58 0.00 0.00 3.27
1947 5313 8.869897 CGAATACATATGCACCGTAAAATATCT 58.130 33.333 1.58 0.00 0.00 1.98
1948 5314 8.114290 CCGAATACATATGCACCGTAAAATATC 58.886 37.037 1.58 0.00 0.00 1.63
1949 5315 7.820386 TCCGAATACATATGCACCGTAAAATAT 59.180 33.333 1.58 0.00 0.00 1.28
1950 5316 7.116662 GTCCGAATACATATGCACCGTAAAATA 59.883 37.037 1.58 0.00 0.00 1.40
1951 5317 5.992829 TCCGAATACATATGCACCGTAAAAT 59.007 36.000 1.58 0.00 0.00 1.82
1952 5318 5.234757 GTCCGAATACATATGCACCGTAAAA 59.765 40.000 1.58 0.00 0.00 1.52
1953 5319 4.746115 GTCCGAATACATATGCACCGTAAA 59.254 41.667 1.58 0.00 0.00 2.01
1954 5320 4.202131 TGTCCGAATACATATGCACCGTAA 60.202 41.667 1.58 0.00 0.00 3.18
1955 5321 3.318557 TGTCCGAATACATATGCACCGTA 59.681 43.478 1.58 0.00 0.00 4.02
1956 5322 2.101750 TGTCCGAATACATATGCACCGT 59.898 45.455 1.58 0.00 0.00 4.83
1957 5323 2.475111 GTGTCCGAATACATATGCACCG 59.525 50.000 1.58 1.76 0.00 4.94
1958 5324 3.728845 AGTGTCCGAATACATATGCACC 58.271 45.455 1.58 0.00 0.00 5.01
1959 5325 4.570772 ACAAGTGTCCGAATACATATGCAC 59.429 41.667 1.58 0.27 0.00 4.57
1960 5326 4.765273 ACAAGTGTCCGAATACATATGCA 58.235 39.130 1.58 0.00 0.00 3.96
1961 5327 6.256975 TGTTACAAGTGTCCGAATACATATGC 59.743 38.462 1.58 0.00 0.00 3.14
1962 5328 7.042725 CCTGTTACAAGTGTCCGAATACATATG 60.043 40.741 0.00 0.00 0.00 1.78
1963 5329 6.984474 CCTGTTACAAGTGTCCGAATACATAT 59.016 38.462 0.00 0.00 0.00 1.78
2087 5460 7.912056 TCAGACTCTTGGTTGAAATCAATAG 57.088 36.000 0.00 1.16 38.24 1.73
2129 5887 2.419324 CCAGACTGCAGAAAAGAGATGC 59.581 50.000 23.35 0.00 40.40 3.91
2178 5936 6.264744 AGTCCGAGTAAATCTCCGATTTGATA 59.735 38.462 11.06 0.00 39.84 2.15
2257 6015 0.038744 TTTCGGACGGAGGGAGTACT 59.961 55.000 0.00 0.00 0.00 2.73
2258 6016 0.890683 TTTTCGGACGGAGGGAGTAC 59.109 55.000 0.00 0.00 0.00 2.73
2259 6017 1.631405 TTTTTCGGACGGAGGGAGTA 58.369 50.000 0.00 0.00 0.00 2.59
2260 6018 2.444281 TTTTTCGGACGGAGGGAGT 58.556 52.632 0.00 0.00 0.00 3.85
2275 6033 5.185828 AGGAACAAGCTTGAGACAAGTTTTT 59.814 36.000 32.50 12.09 0.00 1.94
2276 6034 4.706962 AGGAACAAGCTTGAGACAAGTTTT 59.293 37.500 32.50 12.84 0.00 2.43
2277 6035 4.273318 AGGAACAAGCTTGAGACAAGTTT 58.727 39.130 32.50 13.58 0.00 2.66
2278 6036 3.879892 GAGGAACAAGCTTGAGACAAGTT 59.120 43.478 32.50 14.33 0.00 2.66
2279 6037 3.118261 TGAGGAACAAGCTTGAGACAAGT 60.118 43.478 32.50 5.49 0.00 3.16
2280 6038 3.470709 TGAGGAACAAGCTTGAGACAAG 58.529 45.455 32.50 4.70 0.00 3.16
2281 6039 3.558931 TGAGGAACAAGCTTGAGACAA 57.441 42.857 32.50 10.48 0.00 3.18
2282 6040 3.558931 TTGAGGAACAAGCTTGAGACA 57.441 42.857 32.50 19.34 34.20 3.41
2283 6041 4.516698 TCATTTGAGGAACAAGCTTGAGAC 59.483 41.667 32.50 19.63 39.77 3.36
2284 6042 4.717877 TCATTTGAGGAACAAGCTTGAGA 58.282 39.130 32.50 4.85 39.77 3.27
2285 6043 5.443185 TTCATTTGAGGAACAAGCTTGAG 57.557 39.130 32.50 7.94 39.77 3.02
2286 6044 5.302568 ACATTCATTTGAGGAACAAGCTTGA 59.697 36.000 32.50 8.10 39.77 3.02
2287 6045 5.535333 ACATTCATTTGAGGAACAAGCTTG 58.465 37.500 24.84 24.84 39.77 4.01
2288 6046 5.796424 ACATTCATTTGAGGAACAAGCTT 57.204 34.783 0.00 0.00 39.77 3.74
2289 6047 6.888632 AGATACATTCATTTGAGGAACAAGCT 59.111 34.615 0.00 0.00 39.77 3.74
2290 6048 7.093322 AGATACATTCATTTGAGGAACAAGC 57.907 36.000 0.00 0.00 39.77 4.01
2291 6049 8.341173 GCTAGATACATTCATTTGAGGAACAAG 58.659 37.037 0.00 0.00 39.77 3.16
2292 6050 7.828717 TGCTAGATACATTCATTTGAGGAACAA 59.171 33.333 0.00 0.00 36.65 2.83
2293 6051 7.280876 GTGCTAGATACATTCATTTGAGGAACA 59.719 37.037 0.00 0.00 0.00 3.18
2294 6052 7.497249 AGTGCTAGATACATTCATTTGAGGAAC 59.503 37.037 0.00 0.00 0.00 3.62
2295 6053 7.568349 AGTGCTAGATACATTCATTTGAGGAA 58.432 34.615 0.00 0.00 0.00 3.36
2296 6054 7.129457 AGTGCTAGATACATTCATTTGAGGA 57.871 36.000 0.00 0.00 0.00 3.71
2297 6055 8.768955 GTTAGTGCTAGATACATTCATTTGAGG 58.231 37.037 0.00 0.00 0.00 3.86
2298 6056 9.539825 AGTTAGTGCTAGATACATTCATTTGAG 57.460 33.333 0.00 0.00 0.00 3.02
2299 6057 9.890629 AAGTTAGTGCTAGATACATTCATTTGA 57.109 29.630 0.00 0.00 0.00 2.69
2300 6058 9.926751 CAAGTTAGTGCTAGATACATTCATTTG 57.073 33.333 0.00 0.00 0.00 2.32
2301 6059 9.113838 CCAAGTTAGTGCTAGATACATTCATTT 57.886 33.333 0.00 0.00 0.00 2.32
2302 6060 8.267894 ACCAAGTTAGTGCTAGATACATTCATT 58.732 33.333 0.00 0.00 0.00 2.57
2303 6061 7.712639 CACCAAGTTAGTGCTAGATACATTCAT 59.287 37.037 0.00 0.00 0.00 2.57
2304 6062 7.041721 CACCAAGTTAGTGCTAGATACATTCA 58.958 38.462 0.00 0.00 0.00 2.57
2305 6063 7.470289 CACCAAGTTAGTGCTAGATACATTC 57.530 40.000 0.00 0.00 0.00 2.67
2317 6075 5.986135 GGATGTATCTAGCACCAAGTTAGTG 59.014 44.000 0.00 0.00 38.30 2.74
2318 6076 5.661312 TGGATGTATCTAGCACCAAGTTAGT 59.339 40.000 0.00 0.00 33.25 2.24
2319 6077 6.161855 TGGATGTATCTAGCACCAAGTTAG 57.838 41.667 0.00 0.00 32.79 2.34
2320 6078 6.747414 ATGGATGTATCTAGCACCAAGTTA 57.253 37.500 0.00 0.00 0.00 2.24
2321 6079 5.636903 ATGGATGTATCTAGCACCAAGTT 57.363 39.130 0.00 0.00 0.00 2.66
2322 6080 5.636903 AATGGATGTATCTAGCACCAAGT 57.363 39.130 0.00 0.00 0.00 3.16
2323 6081 6.057533 TCAAATGGATGTATCTAGCACCAAG 58.942 40.000 0.00 0.00 0.00 3.61
2324 6082 6.000246 TCAAATGGATGTATCTAGCACCAA 58.000 37.500 0.00 0.00 0.00 3.67
2325 6083 5.455183 CCTCAAATGGATGTATCTAGCACCA 60.455 44.000 0.00 0.00 0.00 4.17
2326 6084 4.999950 CCTCAAATGGATGTATCTAGCACC 59.000 45.833 0.00 0.00 0.00 5.01
2327 6085 4.999950 CCCTCAAATGGATGTATCTAGCAC 59.000 45.833 0.00 0.00 0.00 4.40
2328 6086 4.907269 TCCCTCAAATGGATGTATCTAGCA 59.093 41.667 0.00 0.00 0.00 3.49
2329 6087 5.221722 TGTCCCTCAAATGGATGTATCTAGC 60.222 44.000 0.00 0.00 33.65 3.42
2330 6088 6.425210 TGTCCCTCAAATGGATGTATCTAG 57.575 41.667 0.00 0.00 33.65 2.43
2331 6089 6.688922 GCTTGTCCCTCAAATGGATGTATCTA 60.689 42.308 0.00 0.00 35.48 1.98
2332 6090 5.688807 CTTGTCCCTCAAATGGATGTATCT 58.311 41.667 0.00 0.00 35.48 1.98
2333 6091 4.276926 GCTTGTCCCTCAAATGGATGTATC 59.723 45.833 0.00 0.00 35.48 2.24
2334 6092 4.079558 AGCTTGTCCCTCAAATGGATGTAT 60.080 41.667 0.00 0.00 35.48 2.29
2335 6093 3.266772 AGCTTGTCCCTCAAATGGATGTA 59.733 43.478 0.00 0.00 35.48 2.29
2336 6094 2.042162 AGCTTGTCCCTCAAATGGATGT 59.958 45.455 0.00 0.00 35.48 3.06
2337 6095 2.731572 AGCTTGTCCCTCAAATGGATG 58.268 47.619 0.00 0.00 35.48 3.51
2338 6096 3.463048 AAGCTTGTCCCTCAAATGGAT 57.537 42.857 0.00 0.00 35.48 3.41
2339 6097 2.978156 AAGCTTGTCCCTCAAATGGA 57.022 45.000 0.00 0.00 35.48 3.41
2340 6098 4.202243 TGAAAAAGCTTGTCCCTCAAATGG 60.202 41.667 0.00 0.00 35.48 3.16
2341 6099 4.947645 TGAAAAAGCTTGTCCCTCAAATG 58.052 39.130 0.00 0.00 35.48 2.32
2342 6100 4.895297 TCTGAAAAAGCTTGTCCCTCAAAT 59.105 37.500 0.00 0.00 35.48 2.32
2343 6101 4.097892 GTCTGAAAAAGCTTGTCCCTCAAA 59.902 41.667 0.00 0.00 35.48 2.69
2344 6102 3.632145 GTCTGAAAAAGCTTGTCCCTCAA 59.368 43.478 0.00 0.00 34.61 3.02
2345 6103 3.214328 GTCTGAAAAAGCTTGTCCCTCA 58.786 45.455 0.00 0.00 0.00 3.86
2346 6104 2.224314 CGTCTGAAAAAGCTTGTCCCTC 59.776 50.000 0.00 0.00 0.00 4.30
2347 6105 2.222027 CGTCTGAAAAAGCTTGTCCCT 58.778 47.619 0.00 0.00 0.00 4.20
2348 6106 1.266989 CCGTCTGAAAAAGCTTGTCCC 59.733 52.381 0.00 0.00 0.00 4.46
2349 6107 2.218603 TCCGTCTGAAAAAGCTTGTCC 58.781 47.619 0.00 0.00 0.00 4.02
2350 6108 2.224314 CCTCCGTCTGAAAAAGCTTGTC 59.776 50.000 0.00 1.07 0.00 3.18
2351 6109 2.222027 CCTCCGTCTGAAAAAGCTTGT 58.778 47.619 0.00 0.00 0.00 3.16
2352 6110 1.537202 CCCTCCGTCTGAAAAAGCTTG 59.463 52.381 0.00 0.00 0.00 4.01
2353 6111 1.420138 TCCCTCCGTCTGAAAAAGCTT 59.580 47.619 0.00 0.00 0.00 3.74
2354 6112 1.002544 CTCCCTCCGTCTGAAAAAGCT 59.997 52.381 0.00 0.00 0.00 3.74
2355 6113 1.270893 ACTCCCTCCGTCTGAAAAAGC 60.271 52.381 0.00 0.00 0.00 3.51
2356 6114 2.841442 ACTCCCTCCGTCTGAAAAAG 57.159 50.000 0.00 0.00 0.00 2.27
2357 6115 4.903045 AATACTCCCTCCGTCTGAAAAA 57.097 40.909 0.00 0.00 0.00 1.94
2358 6116 6.155565 TCATTAATACTCCCTCCGTCTGAAAA 59.844 38.462 0.00 0.00 0.00 2.29
2359 6117 5.659525 TCATTAATACTCCCTCCGTCTGAAA 59.340 40.000 0.00 0.00 0.00 2.69
2360 6118 5.205821 TCATTAATACTCCCTCCGTCTGAA 58.794 41.667 0.00 0.00 0.00 3.02
2361 6119 4.800023 TCATTAATACTCCCTCCGTCTGA 58.200 43.478 0.00 0.00 0.00 3.27
2362 6120 5.290386 GTTCATTAATACTCCCTCCGTCTG 58.710 45.833 0.00 0.00 0.00 3.51
2363 6121 4.037684 CGTTCATTAATACTCCCTCCGTCT 59.962 45.833 0.00 0.00 0.00 4.18
2364 6122 4.037208 TCGTTCATTAATACTCCCTCCGTC 59.963 45.833 0.00 0.00 0.00 4.79
2365 6123 3.956199 TCGTTCATTAATACTCCCTCCGT 59.044 43.478 0.00 0.00 0.00 4.69
2366 6124 4.277672 TCTCGTTCATTAATACTCCCTCCG 59.722 45.833 0.00 0.00 0.00 4.63
2367 6125 5.535406 TCTCTCGTTCATTAATACTCCCTCC 59.465 44.000 0.00 0.00 0.00 4.30
2368 6126 6.263617 AGTCTCTCGTTCATTAATACTCCCTC 59.736 42.308 0.00 0.00 0.00 4.30
2369 6127 6.130569 AGTCTCTCGTTCATTAATACTCCCT 58.869 40.000 0.00 0.00 0.00 4.20
2370 6128 6.394025 AGTCTCTCGTTCATTAATACTCCC 57.606 41.667 0.00 0.00 0.00 4.30
2400 6167 2.159627 GCCTGTAATTCACCACGACTTG 59.840 50.000 0.00 0.00 0.00 3.16
2401 6168 2.224426 TGCCTGTAATTCACCACGACTT 60.224 45.455 0.00 0.00 0.00 3.01
2458 6225 5.688823 TCAAGAAATGCAATACAACTCACG 58.311 37.500 0.00 0.00 0.00 4.35
2488 6257 5.124936 GCGTAAAGGTGAATTCCTATTGGTT 59.875 40.000 2.27 0.00 36.74 3.67
2578 6409 7.267128 CCGTCAGTACCCAATAACAGTTAATA 58.733 38.462 0.00 0.00 0.00 0.98
2579 6410 6.110707 CCGTCAGTACCCAATAACAGTTAAT 58.889 40.000 0.00 0.00 0.00 1.40
2723 6752 5.965922 AGCAAAAACTGAAAGCTAAACACT 58.034 33.333 0.00 0.00 37.60 3.55
2887 6954 1.821136 GGAAGAAACCTGCATCCCTTG 59.179 52.381 0.00 0.00 0.00 3.61
2972 7046 9.838339 CCTTACCATGATCAGTACTAAATTCTT 57.162 33.333 0.09 0.00 0.00 2.52
3043 7123 4.035675 GCCAACTTCAAGTATGCTACCATC 59.964 45.833 0.00 0.00 32.85 3.51
3095 7310 4.335037 GCATTTCAAAACAGGGAAAAAGCA 59.665 37.500 0.00 0.00 37.70 3.91
3096 7311 4.335037 TGCATTTCAAAACAGGGAAAAAGC 59.665 37.500 0.00 0.00 36.67 3.51
3137 7352 8.186163 TGAGCTATGCTTGAAATATTTGACTTG 58.814 33.333 5.17 0.00 39.88 3.16
3214 7489 0.601558 ATGCATACCCTAGCCGTACG 59.398 55.000 8.69 8.69 0.00 3.67
3219 7494 4.286291 ACCTACTAAATGCATACCCTAGCC 59.714 45.833 0.00 0.00 0.00 3.93
3251 7526 9.314321 TCAACCTCTATTATGAATCTTCGAAAC 57.686 33.333 0.00 0.00 0.00 2.78
3284 7559 9.901172 AAGGTCTTCGGTTCAAAAAGTATATAT 57.099 29.630 0.00 0.00 0.00 0.86
3286 7561 9.379791 CTAAGGTCTTCGGTTCAAAAAGTATAT 57.620 33.333 0.00 0.00 0.00 0.86
3287 7562 8.587608 TCTAAGGTCTTCGGTTCAAAAAGTATA 58.412 33.333 0.00 0.00 0.00 1.47
3288 7563 7.447594 TCTAAGGTCTTCGGTTCAAAAAGTAT 58.552 34.615 0.00 0.00 0.00 2.12
3289 7564 6.819284 TCTAAGGTCTTCGGTTCAAAAAGTA 58.181 36.000 0.00 0.00 0.00 2.24
3290 7565 5.677567 TCTAAGGTCTTCGGTTCAAAAAGT 58.322 37.500 0.00 0.00 0.00 2.66
3291 7566 6.037830 TGTTCTAAGGTCTTCGGTTCAAAAAG 59.962 38.462 0.00 0.00 0.00 2.27
3297 7572 5.469084 ACAATTGTTCTAAGGTCTTCGGTTC 59.531 40.000 4.92 0.00 0.00 3.62
3372 7650 2.422377 GGTGTTGGTTAGTTGTCCTGGT 60.422 50.000 0.00 0.00 0.00 4.00
3373 7651 2.227194 GGTGTTGGTTAGTTGTCCTGG 58.773 52.381 0.00 0.00 0.00 4.45
3426 7705 7.994425 TCAAAGCAGTGGACTGAAATAAATA 57.006 32.000 11.06 0.00 46.59 1.40
3581 7860 5.359009 GGATATTATCATCATGGGTTGCTGG 59.641 44.000 6.04 0.00 0.00 4.85
3640 7919 7.201848 GCATCAATGTTCTGGATGAATTAAGGA 60.202 37.037 5.14 0.00 40.61 3.36
3756 8038 4.948847 TCTATGTGCCATGTGTGATACTC 58.051 43.478 0.00 0.00 0.00 2.59
3782 8064 7.661027 TCAAAGGAAAATAATTTTCTTGCCCAG 59.339 33.333 10.53 2.04 42.39 4.45
3796 8078 9.367160 ACAAGGAATCTTCTTCAAAGGAAAATA 57.633 29.630 0.00 0.00 31.35 1.40
3832 8114 7.984422 TTTTGTGTGACTCATGACTTATGAT 57.016 32.000 0.00 0.00 44.48 2.45
3868 8150 1.000060 TGGAAAAGTGCTGCAATGCTC 60.000 47.619 2.77 3.43 0.00 4.26
3878 8160 9.811655 GCTTTATAAGAAAATTTGGAAAAGTGC 57.188 29.630 0.00 0.00 0.00 4.40
3886 8168 7.276438 GCACCAGAGCTTTATAAGAAAATTTGG 59.724 37.037 0.00 0.00 0.00 3.28
3926 8208 9.646522 AAGGGCATCAAAGTATACTTCAATTAT 57.353 29.630 18.28 5.65 34.61 1.28
3974 8262 4.323417 ACGGTATCATTCTCAAACTGCAA 58.677 39.130 0.00 0.00 0.00 4.08
4015 8303 6.086011 TCAGGGTAATAACCAAACCATGAT 57.914 37.500 4.13 0.00 46.03 2.45
4039 8327 0.462759 GGACTGGATCAAAGGCTCCG 60.463 60.000 0.00 0.00 34.05 4.63
4069 8357 7.781056 ACATGAAGAACAAAAATTGTACCTGT 58.219 30.769 0.00 0.00 44.59 4.00
4107 8400 5.927281 ATTTCATCAACTTGCTAAGCCAT 57.073 34.783 0.00 0.00 0.00 4.40
4117 8410 9.305925 GAAACAGACTCAAAATTTCATCAACTT 57.694 29.630 0.00 0.00 31.11 2.66
4138 8431 2.325583 AAGTTCAGTGAGCCGAAACA 57.674 45.000 3.01 0.00 0.00 2.83
4161 8454 3.737774 GCTTTGTCTGCAGACCAAATTTC 59.262 43.478 37.23 23.19 44.15 2.17
4224 8517 1.301716 GAACTTGACTCGCCCTGCA 60.302 57.895 0.00 0.00 0.00 4.41
4227 8520 1.006102 CACGAACTTGACTCGCCCT 60.006 57.895 0.00 0.00 39.97 5.19
4329 8622 1.446272 CGAAGGGCGAGGAAGTCAC 60.446 63.158 0.00 0.00 44.57 3.67
4366 8659 1.608590 CCTGAGCGTTTCACCAATTGT 59.391 47.619 4.43 0.00 0.00 2.71
4421 8715 1.513586 GGTGGATCGTCACGTCGAC 60.514 63.158 5.18 5.18 42.56 4.20
4427 8721 3.502211 ACAAAAAGATGGTGGATCGTCAC 59.498 43.478 0.00 0.00 36.04 3.67
4488 8800 4.233123 TGACAGAAGCAAAGCATGAAAG 57.767 40.909 0.00 0.00 0.00 2.62
4489 8801 4.614306 CGATGACAGAAGCAAAGCATGAAA 60.614 41.667 0.00 0.00 0.00 2.69
4494 8806 0.518636 GCGATGACAGAAGCAAAGCA 59.481 50.000 0.00 0.00 0.00 3.91
4507 8823 2.635714 TGGTCTTCTACGTAGCGATGA 58.364 47.619 18.00 9.58 0.00 2.92
4515 8832 9.661563 TTTTACAATTGATATGGTCTTCTACGT 57.338 29.630 13.59 0.00 0.00 3.57
4637 8954 2.437180 CATGCGGGCAGAAGCTCA 60.437 61.111 0.00 0.00 43.19 4.26
4649 8966 2.973316 TTGCACTGCTGAGCATGCG 61.973 57.895 25.28 12.36 41.88 4.73
4679 8999 3.008266 TGGTGTCATCAAATCAGCAGAGA 59.992 43.478 0.00 0.00 35.23 3.10
4682 9002 3.366679 GGTTGGTGTCATCAAATCAGCAG 60.367 47.826 0.00 0.00 39.93 4.24
4687 9007 3.074412 ACTCGGTTGGTGTCATCAAATC 58.926 45.455 0.00 0.00 0.00 2.17
4708 9028 2.552599 TCGTGTGCTAATTCCCAACA 57.447 45.000 0.00 0.00 0.00 3.33
4762 9082 8.590204 TGAATTAGTACATGAAGTAGTGTTGGA 58.410 33.333 0.00 0.00 36.99 3.53
4778 9098 7.857885 GCTAAGCAACCATCATTGAATTAGTAC 59.142 37.037 0.00 0.00 35.23 2.73
4787 9107 3.441222 TCTGTGCTAAGCAACCATCATTG 59.559 43.478 0.00 0.00 41.47 2.82
4790 9110 2.857186 TCTGTGCTAAGCAACCATCA 57.143 45.000 0.00 0.00 41.47 3.07
4794 9114 2.185004 TCCTTCTGTGCTAAGCAACC 57.815 50.000 0.00 0.00 41.47 3.77
4807 9127 4.455606 CTGTTGTTCAGAGGTTTCCTTCT 58.544 43.478 0.00 0.00 46.27 2.85
4811 9131 2.291741 CTGCTGTTGTTCAGAGGTTTCC 59.708 50.000 0.00 0.00 46.27 3.13
4819 9139 4.201940 TGTTGATGTTCTGCTGTTGTTCAG 60.202 41.667 0.00 0.00 46.12 3.02
4822 9142 3.443329 TGTGTTGATGTTCTGCTGTTGTT 59.557 39.130 0.00 0.00 0.00 2.83
4824 9144 3.696281 TGTGTTGATGTTCTGCTGTTG 57.304 42.857 0.00 0.00 0.00 3.33
4825 9145 5.620654 GCATATGTGTTGATGTTCTGCTGTT 60.621 40.000 4.29 0.00 0.00 3.16
4830 9211 3.789791 GCGGCATATGTGTTGATGTTCTG 60.790 47.826 4.29 0.00 0.00 3.02
4849 9230 2.757868 TCCCACATTAAAAATCTGGCGG 59.242 45.455 0.00 0.00 0.00 6.13
4851 9232 4.935205 GGTTTCCCACATTAAAAATCTGGC 59.065 41.667 0.00 0.00 0.00 4.85
4890 9271 2.725641 GCTTCGGCCCGTGTTTTT 59.274 55.556 1.63 0.00 34.32 1.94
4930 9311 7.774625 AGAACATTTTGTTTCCCACATTTGATT 59.225 29.630 0.00 0.00 41.28 2.57
4958 9339 7.517898 TGAGATCCTCTAGTGCTACCTATAT 57.482 40.000 0.00 0.00 0.00 0.86
5020 9408 3.955101 CTACCTCTCGCGGCCTCG 61.955 72.222 9.35 9.35 39.81 4.63
5024 9412 2.499827 AATCCCTACCTCTCGCGGC 61.500 63.158 6.13 0.00 0.00 6.53
5029 9417 6.098982 TGAGATTCTTTCAATCCCTACCTCTC 59.901 42.308 0.00 0.00 0.00 3.20
5034 9422 8.511604 TTTGATGAGATTCTTTCAATCCCTAC 57.488 34.615 11.52 0.00 0.00 3.18
5047 9435 6.151648 TGGTTTCACCATCTTTGATGAGATTC 59.848 38.462 8.91 4.02 44.79 2.52
5067 9455 4.640771 TGTCTCCTTGAAGCTATGGTTT 57.359 40.909 0.00 0.00 0.00 3.27
5093 9481 2.224523 GGTTGTGAAGTCCAGATCCACA 60.225 50.000 0.00 0.00 36.15 4.17
5102 9490 0.476771 TCCCCAAGGTTGTGAAGTCC 59.523 55.000 0.00 0.00 0.00 3.85
5105 9493 1.549203 CCATCCCCAAGGTTGTGAAG 58.451 55.000 0.00 0.00 31.77 3.02
5155 9543 7.933223 AGAAAGGGAAAGATAGGAAGATTGAA 58.067 34.615 0.00 0.00 0.00 2.69
5156 9544 7.404396 AGAGAAAGGGAAAGATAGGAAGATTGA 59.596 37.037 0.00 0.00 0.00 2.57
5157 9545 7.572814 AGAGAAAGGGAAAGATAGGAAGATTG 58.427 38.462 0.00 0.00 0.00 2.67
5158 9546 7.763564 AGAGAAAGGGAAAGATAGGAAGATT 57.236 36.000 0.00 0.00 0.00 2.40
5159 9547 7.763564 AAGAGAAAGGGAAAGATAGGAAGAT 57.236 36.000 0.00 0.00 0.00 2.40
5160 9548 7.575499 AAAGAGAAAGGGAAAGATAGGAAGA 57.425 36.000 0.00 0.00 0.00 2.87
5161 9549 7.121907 CCAAAAGAGAAAGGGAAAGATAGGAAG 59.878 40.741 0.00 0.00 0.00 3.46
5162 9550 6.948309 CCAAAAGAGAAAGGGAAAGATAGGAA 59.052 38.462 0.00 0.00 0.00 3.36
5163 9551 6.045577 ACCAAAAGAGAAAGGGAAAGATAGGA 59.954 38.462 0.00 0.00 0.00 2.94
5164 9552 6.249192 ACCAAAAGAGAAAGGGAAAGATAGG 58.751 40.000 0.00 0.00 0.00 2.57
5165 9553 7.767250 AACCAAAAGAGAAAGGGAAAGATAG 57.233 36.000 0.00 0.00 0.00 2.08
5166 9554 8.004801 AGAAACCAAAAGAGAAAGGGAAAGATA 58.995 33.333 0.00 0.00 0.00 1.98
5167 9555 6.841229 AGAAACCAAAAGAGAAAGGGAAAGAT 59.159 34.615 0.00 0.00 0.00 2.40
5168 9556 6.194967 AGAAACCAAAAGAGAAAGGGAAAGA 58.805 36.000 0.00 0.00 0.00 2.52
5169 9557 6.322456 AGAGAAACCAAAAGAGAAAGGGAAAG 59.678 38.462 0.00 0.00 0.00 2.62
5170 9558 6.194967 AGAGAAACCAAAAGAGAAAGGGAAA 58.805 36.000 0.00 0.00 0.00 3.13
5171 9559 5.766590 AGAGAAACCAAAAGAGAAAGGGAA 58.233 37.500 0.00 0.00 0.00 3.97
5172 9560 5.388599 AGAGAAACCAAAAGAGAAAGGGA 57.611 39.130 0.00 0.00 0.00 4.20
5173 9561 6.471233 AAAGAGAAACCAAAAGAGAAAGGG 57.529 37.500 0.00 0.00 0.00 3.95
5174 9562 7.776107 AGAAAAGAGAAACCAAAAGAGAAAGG 58.224 34.615 0.00 0.00 0.00 3.11
5175 9563 9.295214 GAAGAAAAGAGAAACCAAAAGAGAAAG 57.705 33.333 0.00 0.00 0.00 2.62
5176 9564 9.025041 AGAAGAAAAGAGAAACCAAAAGAGAAA 57.975 29.630 0.00 0.00 0.00 2.52
5177 9565 8.581253 AGAAGAAAAGAGAAACCAAAAGAGAA 57.419 30.769 0.00 0.00 0.00 2.87
5178 9566 7.283354 GGAGAAGAAAAGAGAAACCAAAAGAGA 59.717 37.037 0.00 0.00 0.00 3.10
5179 9567 7.067494 TGGAGAAGAAAAGAGAAACCAAAAGAG 59.933 37.037 0.00 0.00 0.00 2.85
5180 9568 6.889722 TGGAGAAGAAAAGAGAAACCAAAAGA 59.110 34.615 0.00 0.00 0.00 2.52
5181 9569 7.100458 TGGAGAAGAAAAGAGAAACCAAAAG 57.900 36.000 0.00 0.00 0.00 2.27
5182 9570 7.475137 TTGGAGAAGAAAAGAGAAACCAAAA 57.525 32.000 0.00 0.00 33.03 2.44
5183 9571 7.417797 CCATTGGAGAAGAAAAGAGAAACCAAA 60.418 37.037 0.00 0.00 38.16 3.28
5184 9572 6.040842 CCATTGGAGAAGAAAAGAGAAACCAA 59.959 38.462 0.00 0.00 38.82 3.67
5185 9573 5.536161 CCATTGGAGAAGAAAAGAGAAACCA 59.464 40.000 0.00 0.00 0.00 3.67
5186 9574 5.770162 TCCATTGGAGAAGAAAAGAGAAACC 59.230 40.000 0.00 0.00 0.00 3.27
5187 9575 6.884280 TCCATTGGAGAAGAAAAGAGAAAC 57.116 37.500 0.00 0.00 0.00 2.78
5202 9590 1.198094 TCCGTTGAGCCTCCATTGGA 61.198 55.000 5.05 5.05 0.00 3.53
5203 9591 1.026718 GTCCGTTGAGCCTCCATTGG 61.027 60.000 0.00 0.00 0.00 3.16
5204 9592 0.321564 TGTCCGTTGAGCCTCCATTG 60.322 55.000 0.00 0.00 0.00 2.82
5205 9593 0.620556 ATGTCCGTTGAGCCTCCATT 59.379 50.000 0.00 0.00 0.00 3.16
5206 9594 0.620556 AATGTCCGTTGAGCCTCCAT 59.379 50.000 0.00 0.00 0.00 3.41
5207 9595 0.400213 AAATGTCCGTTGAGCCTCCA 59.600 50.000 0.00 0.00 0.00 3.86
5208 9596 1.468914 GAAAATGTCCGTTGAGCCTCC 59.531 52.381 0.00 0.00 0.00 4.30
5209 9597 2.095718 GTGAAAATGTCCGTTGAGCCTC 60.096 50.000 0.00 0.00 0.00 4.70
5210 9598 1.880027 GTGAAAATGTCCGTTGAGCCT 59.120 47.619 0.00 0.00 0.00 4.58
5211 9599 1.606668 TGTGAAAATGTCCGTTGAGCC 59.393 47.619 0.00 0.00 0.00 4.70
5212 9600 2.290641 AGTGTGAAAATGTCCGTTGAGC 59.709 45.455 0.00 0.00 0.00 4.26
5213 9601 3.849645 GCAGTGTGAAAATGTCCGTTGAG 60.850 47.826 0.00 0.00 0.00 3.02
5214 9602 2.032799 GCAGTGTGAAAATGTCCGTTGA 59.967 45.455 0.00 0.00 0.00 3.18
5215 9603 2.033299 AGCAGTGTGAAAATGTCCGTTG 59.967 45.455 0.00 0.00 0.00 4.10
5216 9604 2.297701 AGCAGTGTGAAAATGTCCGTT 58.702 42.857 0.00 0.00 0.00 4.44
5217 9605 1.967319 AGCAGTGTGAAAATGTCCGT 58.033 45.000 0.00 0.00 0.00 4.69
5218 9606 2.033299 ACAAGCAGTGTGAAAATGTCCG 59.967 45.455 0.00 0.00 39.72 4.79
5219 9607 3.715628 ACAAGCAGTGTGAAAATGTCC 57.284 42.857 0.00 0.00 39.72 4.02
5220 9608 3.798337 CCAACAAGCAGTGTGAAAATGTC 59.202 43.478 0.00 0.00 40.60 3.06
5221 9609 3.430651 CCCAACAAGCAGTGTGAAAATGT 60.431 43.478 0.00 0.00 40.60 2.71
5222 9610 3.125316 CCCAACAAGCAGTGTGAAAATG 58.875 45.455 0.00 0.00 40.60 2.32
5223 9611 2.765699 ACCCAACAAGCAGTGTGAAAAT 59.234 40.909 0.00 0.00 40.60 1.82
5224 9612 2.094286 CACCCAACAAGCAGTGTGAAAA 60.094 45.455 0.00 0.00 40.60 2.29
5225 9613 1.476085 CACCCAACAAGCAGTGTGAAA 59.524 47.619 0.00 0.00 40.60 2.69
5226 9614 1.102154 CACCCAACAAGCAGTGTGAA 58.898 50.000 0.00 0.00 40.60 3.18
5227 9615 0.034574 ACACCCAACAAGCAGTGTGA 60.035 50.000 0.00 0.00 41.69 3.58
5228 9616 0.817013 AACACCCAACAAGCAGTGTG 59.183 50.000 0.00 0.00 42.40 3.82
5229 9617 0.817013 CAACACCCAACAAGCAGTGT 59.183 50.000 0.00 0.00 45.02 3.55
5230 9618 0.102844 CCAACACCCAACAAGCAGTG 59.897 55.000 0.00 0.00 36.30 3.66
5231 9619 0.033601 TCCAACACCCAACAAGCAGT 60.034 50.000 0.00 0.00 0.00 4.40
5232 9620 1.000060 CATCCAACACCCAACAAGCAG 60.000 52.381 0.00 0.00 0.00 4.24
5233 9621 1.039068 CATCCAACACCCAACAAGCA 58.961 50.000 0.00 0.00 0.00 3.91
5234 9622 0.318120 CCATCCAACACCCAACAAGC 59.682 55.000 0.00 0.00 0.00 4.01
5235 9623 0.968405 CCCATCCAACACCCAACAAG 59.032 55.000 0.00 0.00 0.00 3.16
5236 9624 0.558220 TCCCATCCAACACCCAACAA 59.442 50.000 0.00 0.00 0.00 2.83
5237 9625 0.783206 ATCCCATCCAACACCCAACA 59.217 50.000 0.00 0.00 0.00 3.33
5238 9626 1.185315 CATCCCATCCAACACCCAAC 58.815 55.000 0.00 0.00 0.00 3.77
5239 9627 0.040942 CCATCCCATCCAACACCCAA 59.959 55.000 0.00 0.00 0.00 4.12
5240 9628 1.145900 ACCATCCCATCCAACACCCA 61.146 55.000 0.00 0.00 0.00 4.51
5241 9629 0.923358 TACCATCCCATCCAACACCC 59.077 55.000 0.00 0.00 0.00 4.61
5242 9630 2.818751 TTACCATCCCATCCAACACC 57.181 50.000 0.00 0.00 0.00 4.16
5243 9631 3.829601 TGTTTTACCATCCCATCCAACAC 59.170 43.478 0.00 0.00 0.00 3.32
5244 9632 4.119556 TGTTTTACCATCCCATCCAACA 57.880 40.909 0.00 0.00 0.00 3.33
5245 9633 5.262588 GATGTTTTACCATCCCATCCAAC 57.737 43.478 0.00 0.00 36.12 3.77
5254 9642 3.296854 GGAAGGGGGATGTTTTACCATC 58.703 50.000 0.00 0.00 40.43 3.51
5255 9643 2.023404 GGGAAGGGGGATGTTTTACCAT 60.023 50.000 0.00 0.00 0.00 3.55
5256 9644 1.359818 GGGAAGGGGGATGTTTTACCA 59.640 52.381 0.00 0.00 0.00 3.25
5257 9645 1.644337 AGGGAAGGGGGATGTTTTACC 59.356 52.381 0.00 0.00 0.00 2.85
5258 9646 2.310647 TGAGGGAAGGGGGATGTTTTAC 59.689 50.000 0.00 0.00 0.00 2.01
5259 9647 2.650013 TGAGGGAAGGGGGATGTTTTA 58.350 47.619 0.00 0.00 0.00 1.52
5260 9648 1.466858 TGAGGGAAGGGGGATGTTTT 58.533 50.000 0.00 0.00 0.00 2.43
5261 9649 1.288932 CATGAGGGAAGGGGGATGTTT 59.711 52.381 0.00 0.00 0.00 2.83
5262 9650 0.929244 CATGAGGGAAGGGGGATGTT 59.071 55.000 0.00 0.00 0.00 2.71
5263 9651 0.253820 ACATGAGGGAAGGGGGATGT 60.254 55.000 0.00 0.00 0.00 3.06
5264 9652 0.184451 CACATGAGGGAAGGGGGATG 59.816 60.000 0.00 0.00 0.00 3.51
5265 9653 1.649271 GCACATGAGGGAAGGGGGAT 61.649 60.000 0.00 0.00 0.00 3.85
5266 9654 2.308722 GCACATGAGGGAAGGGGGA 61.309 63.158 0.00 0.00 0.00 4.81
5267 9655 2.153898 TTGCACATGAGGGAAGGGGG 62.154 60.000 0.00 0.00 0.00 5.40
5268 9656 0.251742 TTTGCACATGAGGGAAGGGG 60.252 55.000 0.00 0.00 0.00 4.79
5269 9657 1.180029 CTTTGCACATGAGGGAAGGG 58.820 55.000 0.00 0.00 0.00 3.95
5270 9658 1.815003 GACTTTGCACATGAGGGAAGG 59.185 52.381 0.00 1.82 0.00 3.46
5271 9659 1.815003 GGACTTTGCACATGAGGGAAG 59.185 52.381 0.00 1.02 0.00 3.46
5272 9660 1.144708 TGGACTTTGCACATGAGGGAA 59.855 47.619 0.00 0.00 0.00 3.97
5273 9661 0.770499 TGGACTTTGCACATGAGGGA 59.230 50.000 0.00 0.00 0.00 4.20
5274 9662 1.619654 TTGGACTTTGCACATGAGGG 58.380 50.000 0.00 0.00 0.00 4.30
5275 9663 3.731652 TTTTGGACTTTGCACATGAGG 57.268 42.857 0.00 0.00 0.00 3.86
5276 9664 5.634859 GGTTATTTTGGACTTTGCACATGAG 59.365 40.000 0.00 0.00 0.00 2.90
5277 9665 5.304101 AGGTTATTTTGGACTTTGCACATGA 59.696 36.000 0.00 0.00 0.00 3.07
5278 9666 5.540911 AGGTTATTTTGGACTTTGCACATG 58.459 37.500 0.00 0.00 0.00 3.21
5279 9667 5.806654 AGGTTATTTTGGACTTTGCACAT 57.193 34.783 0.00 0.00 0.00 3.21
5280 9668 6.266558 ACATAGGTTATTTTGGACTTTGCACA 59.733 34.615 0.00 0.00 0.00 4.57
5281 9669 6.687604 ACATAGGTTATTTTGGACTTTGCAC 58.312 36.000 0.00 0.00 0.00 4.57
5282 9670 6.909550 ACATAGGTTATTTTGGACTTTGCA 57.090 33.333 0.00 0.00 0.00 4.08
5283 9671 8.301002 TGTAACATAGGTTATTTTGGACTTTGC 58.699 33.333 2.93 0.00 41.28 3.68
5286 9674 8.799367 GGTTGTAACATAGGTTATTTTGGACTT 58.201 33.333 2.93 0.00 41.28 3.01
5287 9675 7.395206 GGGTTGTAACATAGGTTATTTTGGACT 59.605 37.037 2.93 0.00 41.28 3.85
5288 9676 7.395206 AGGGTTGTAACATAGGTTATTTTGGAC 59.605 37.037 2.93 0.00 41.28 4.02
5289 9677 7.471890 AGGGTTGTAACATAGGTTATTTTGGA 58.528 34.615 2.93 0.00 41.28 3.53
5290 9678 7.712204 AGGGTTGTAACATAGGTTATTTTGG 57.288 36.000 2.93 0.00 41.28 3.28
5291 9679 9.457436 AGTAGGGTTGTAACATAGGTTATTTTG 57.543 33.333 2.93 0.00 41.28 2.44
5292 9680 9.457436 CAGTAGGGTTGTAACATAGGTTATTTT 57.543 33.333 2.93 0.00 41.28 1.82
5293 9681 8.050930 CCAGTAGGGTTGTAACATAGGTTATTT 58.949 37.037 2.93 0.00 41.28 1.40
5294 9682 7.571025 CCAGTAGGGTTGTAACATAGGTTATT 58.429 38.462 2.93 0.00 41.28 1.40
5295 9683 7.133133 CCAGTAGGGTTGTAACATAGGTTAT 57.867 40.000 2.93 0.00 41.28 1.89
5296 9684 6.549433 CCAGTAGGGTTGTAACATAGGTTA 57.451 41.667 0.00 0.00 38.45 2.85
5297 9685 5.431179 CCAGTAGGGTTGTAACATAGGTT 57.569 43.478 0.00 0.00 41.06 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.