Multiple sequence alignment - TraesCS4D01G348800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G348800 chr4D 100.000 4743 0 0 1 4743 502379565 502384307 0.000000e+00 8759
1 TraesCS4D01G348800 chr5A 96.514 2668 88 2 736 3402 685059291 685061954 0.000000e+00 4407
2 TraesCS4D01G348800 chr5A 89.346 1361 103 25 3388 4743 685069820 685071143 0.000000e+00 1672
3 TraesCS4D01G348800 chr5A 80.902 1618 265 28 2186 3774 560718362 560716760 0.000000e+00 1236
4 TraesCS4D01G348800 chr5A 93.103 261 17 1 1 261 685058744 685059003 9.630000e-102 381
5 TraesCS4D01G348800 chr5A 95.266 169 8 0 249 417 685059125 685059293 7.820000e-68 268
6 TraesCS4D01G348800 chr1D 91.667 324 25 2 416 738 481307713 481308035 9.360000e-122 448
7 TraesCS4D01G348800 chr1D 91.049 324 27 2 416 738 481140910 481141232 2.030000e-118 436
8 TraesCS4D01G348800 chr1D 88.670 203 21 2 4541 4743 338079197 338078997 3.670000e-61 246
9 TraesCS4D01G348800 chr7A 91.589 321 26 1 417 736 690433979 690434299 4.360000e-120 442
10 TraesCS4D01G348800 chr7A 86.500 200 22 4 1 200 287240774 287240968 1.030000e-51 215
11 TraesCS4D01G348800 chr5D 91.104 326 28 1 415 739 391744616 391744941 1.570000e-119 440
12 TraesCS4D01G348800 chr5D 89.024 328 34 2 418 743 480753794 480753467 5.720000e-109 405
13 TraesCS4D01G348800 chr5D 88.710 186 16 4 1 185 459115518 459115699 6.180000e-54 222
14 TraesCS4D01G348800 chr1A 90.578 329 29 2 415 741 98241771 98242099 7.290000e-118 435
15 TraesCS4D01G348800 chr1A 89.720 321 31 2 417 736 398138940 398139259 4.420000e-110 409
16 TraesCS4D01G348800 chr1A 87.255 204 22 3 4541 4743 544406610 544406810 3.690000e-56 230
17 TraesCS4D01G348800 chr1A 87.435 191 22 1 1 191 380320155 380319967 7.990000e-53 219
18 TraesCS4D01G348800 chr7D 90.062 322 30 2 417 736 111077675 111077996 2.640000e-112 416
19 TraesCS4D01G348800 chr7D 79.252 294 57 4 1180 1471 80715754 80715463 8.050000e-48 202
20 TraesCS4D01G348800 chr4A 89.846 325 32 1 415 738 709857522 709857198 2.640000e-112 416
21 TraesCS4D01G348800 chr3D 88.670 203 22 1 4541 4743 459505690 459505489 3.670000e-61 246
22 TraesCS4D01G348800 chr3D 86.207 203 27 1 4541 4743 592232311 592232512 7.990000e-53 219
23 TraesCS4D01G348800 chr7B 88.000 200 23 1 4544 4743 78232878 78232680 7.940000e-58 235
24 TraesCS4D01G348800 chr7B 86.275 204 26 2 4541 4743 202528197 202528399 2.220000e-53 220
25 TraesCS4D01G348800 chr7B 87.895 190 20 2 1 190 480639805 480639991 2.220000e-53 220
26 TraesCS4D01G348800 chr2D 87.129 202 23 2 4543 4743 468806083 468805884 4.780000e-55 226
27 TraesCS4D01G348800 chr2D 84.541 207 30 2 1233 1438 584758247 584758452 2.240000e-48 204
28 TraesCS4D01G348800 chr3B 86.700 203 26 1 4541 4743 174139859 174139658 1.720000e-54 224
29 TraesCS4D01G348800 chr2B 82.375 261 42 4 1180 1438 704763277 704763535 1.720000e-54 224
30 TraesCS4D01G348800 chr6B 88.710 186 15 5 1 185 636180016 636179836 6.180000e-54 222
31 TraesCS4D01G348800 chr6B 88.298 188 17 4 1 187 124390693 124390876 2.220000e-53 220
32 TraesCS4D01G348800 chr5B 88.021 192 18 4 1 191 406880105 406879918 6.180000e-54 222
33 TraesCS4D01G348800 chr5B 87.565 193 20 3 1 192 639761175 639761364 2.220000e-53 220
34 TraesCS4D01G348800 chr6A 80.339 295 47 8 1175 1463 585971276 585971565 3.720000e-51 213


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G348800 chr4D 502379565 502384307 4742 False 8759.000000 8759 100.000 1 4743 1 chr4D.!!$F1 4742
1 TraesCS4D01G348800 chr5A 685058744 685061954 3210 False 1685.333333 4407 94.961 1 3402 3 chr5A.!!$F2 3401
2 TraesCS4D01G348800 chr5A 685069820 685071143 1323 False 1672.000000 1672 89.346 3388 4743 1 chr5A.!!$F1 1355
3 TraesCS4D01G348800 chr5A 560716760 560718362 1602 True 1236.000000 1236 80.902 2186 3774 1 chr5A.!!$R1 1588

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
498 633 0.040067 CGGACAGCTCCAACAAAAGC 60.040 55.0 0.00 0.0 36.12 3.51 F
691 826 0.094730 CTACAGTGGCGCGCTAAAAC 59.905 55.0 32.29 22.4 0.00 2.43 F
1279 1415 0.319986 TGGCGTCGCTTGTCATTGTA 60.320 50.0 18.11 0.0 0.00 2.41 F
2034 2170 0.323087 ATGCATGCACCTTGCTCTCA 60.323 50.0 25.37 0.0 45.31 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1705 1841 0.511221 AGCACGTCGTGTTGCATAAC 59.489 50.000 25.18 7.19 35.75 1.89 R
1904 2040 1.003116 GGCAATGATCACGAGCATCAC 60.003 52.381 15.20 0.00 36.27 3.06 R
2842 2993 0.609957 TTCTCGGGTCGTAGCCAAGA 60.610 55.000 4.42 0.00 34.89 3.02 R
3816 3973 0.171679 TCGAGCGGAATTTACAGCGA 59.828 50.000 0.00 0.00 36.22 4.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
95 96 6.669631 TCCTCAATAAATAGGAGAAAACCCC 58.330 40.000 0.00 0.00 36.97 4.95
108 109 2.958578 AAACCCCTGTGCGTCACCTG 62.959 60.000 7.38 1.80 32.73 4.00
112 113 1.227527 CCTGTGCGTCACCTGTCAA 60.228 57.895 7.38 0.00 32.73 3.18
139 140 3.197116 AGGAATTGAACTCGGGTCGTTAT 59.803 43.478 0.00 0.00 0.00 1.89
150 151 1.296056 GGTCGTTATGCCGCACAACT 61.296 55.000 12.47 0.00 0.00 3.16
155 156 2.569657 ATGCCGCACAACTGCATG 59.430 55.556 0.00 0.00 46.17 4.06
173 174 2.300956 TGCCCAACCATTGAGCTAAA 57.699 45.000 0.00 0.00 35.20 1.85
174 175 2.603021 TGCCCAACCATTGAGCTAAAA 58.397 42.857 0.00 0.00 35.20 1.52
178 179 4.082125 CCCAACCATTGAGCTAAAACTCT 58.918 43.478 0.00 0.00 37.58 3.24
224 225 7.020010 AGTGTACGAAGAGTAATTGTAGAACG 58.980 38.462 0.00 0.00 37.02 3.95
248 249 8.952278 ACGTAAAAGTGAATAGAATTATTGCCA 58.048 29.630 0.00 0.00 29.67 4.92
252 253 8.593945 AAAGTGAATAGAATTATTGCCAGGAA 57.406 30.769 0.00 0.00 29.67 3.36
294 429 2.009051 TGTCGAACTATGCAGCAATGG 58.991 47.619 0.00 0.00 0.00 3.16
304 439 0.451383 GCAGCAATGGCACGTATGAA 59.549 50.000 0.00 0.00 44.61 2.57
332 467 4.026804 CACTCGATTCAGTACGGTAAATGC 60.027 45.833 0.00 0.00 0.00 3.56
341 476 4.033587 CAGTACGGTAAATGCGCATAAACT 59.966 41.667 25.61 15.22 0.00 2.66
398 533 3.535280 ATTTCTTGCCCGTTTGTTGTT 57.465 38.095 0.00 0.00 0.00 2.83
403 538 0.681564 TGCCCGTTTGTTGTTGTCCT 60.682 50.000 0.00 0.00 0.00 3.85
414 549 6.767524 TTGTTGTTGTCCTACACTTCATTT 57.232 33.333 0.00 0.00 0.00 2.32
415 550 7.867305 TTGTTGTTGTCCTACACTTCATTTA 57.133 32.000 0.00 0.00 0.00 1.40
416 551 7.867305 TGTTGTTGTCCTACACTTCATTTAA 57.133 32.000 0.00 0.00 0.00 1.52
417 552 7.925993 TGTTGTTGTCCTACACTTCATTTAAG 58.074 34.615 0.00 0.00 41.33 1.85
418 553 7.771361 TGTTGTTGTCCTACACTTCATTTAAGA 59.229 33.333 0.00 0.00 38.67 2.10
419 554 7.962964 TGTTGTCCTACACTTCATTTAAGAG 57.037 36.000 0.00 0.00 38.67 2.85
420 555 6.426937 TGTTGTCCTACACTTCATTTAAGAGC 59.573 38.462 0.00 0.00 38.67 4.09
421 556 6.109156 TGTCCTACACTTCATTTAAGAGCA 57.891 37.500 0.00 0.00 38.67 4.26
422 557 6.711277 TGTCCTACACTTCATTTAAGAGCAT 58.289 36.000 0.00 0.00 38.67 3.79
423 558 6.818644 TGTCCTACACTTCATTTAAGAGCATC 59.181 38.462 0.00 0.00 38.67 3.91
434 569 3.805267 GAGCATCTCCAACAGGCG 58.195 61.111 0.00 0.00 0.00 5.52
435 570 2.437359 AGCATCTCCAACAGGCGC 60.437 61.111 0.00 0.00 0.00 6.53
436 571 3.512516 GCATCTCCAACAGGCGCC 61.513 66.667 21.89 21.89 0.00 6.53
437 572 2.825836 CATCTCCAACAGGCGCCC 60.826 66.667 26.15 5.07 0.00 6.13
438 573 3.329889 ATCTCCAACAGGCGCCCA 61.330 61.111 26.15 0.00 0.00 5.36
439 574 2.905996 ATCTCCAACAGGCGCCCAA 61.906 57.895 26.15 0.88 0.00 4.12
440 575 2.215451 ATCTCCAACAGGCGCCCAAT 62.215 55.000 26.15 5.69 0.00 3.16
441 576 1.077787 CTCCAACAGGCGCCCAATA 60.078 57.895 26.15 2.90 0.00 1.90
442 577 0.679640 CTCCAACAGGCGCCCAATAA 60.680 55.000 26.15 3.57 0.00 1.40
443 578 0.963355 TCCAACAGGCGCCCAATAAC 60.963 55.000 26.15 0.00 0.00 1.89
444 579 0.965363 CCAACAGGCGCCCAATAACT 60.965 55.000 26.15 0.00 0.00 2.24
445 580 1.680555 CCAACAGGCGCCCAATAACTA 60.681 52.381 26.15 0.00 0.00 2.24
446 581 1.670811 CAACAGGCGCCCAATAACTAG 59.329 52.381 26.15 4.36 0.00 2.57
447 582 0.180406 ACAGGCGCCCAATAACTAGG 59.820 55.000 26.15 2.28 0.00 3.02
448 583 1.148498 AGGCGCCCAATAACTAGGC 59.852 57.895 26.15 0.00 43.53 3.93
449 584 1.897137 GGCGCCCAATAACTAGGCC 60.897 63.158 18.11 0.00 44.13 5.19
450 585 2.251642 GCGCCCAATAACTAGGCCG 61.252 63.158 0.00 0.00 44.13 6.13
451 586 2.251642 CGCCCAATAACTAGGCCGC 61.252 63.158 0.00 0.00 44.13 6.53
452 587 2.251642 GCCCAATAACTAGGCCGCG 61.252 63.158 0.00 0.00 41.00 6.46
453 588 2.251642 CCCAATAACTAGGCCGCGC 61.252 63.158 0.00 0.00 0.00 6.86
454 589 2.594962 CCAATAACTAGGCCGCGCG 61.595 63.158 25.67 25.67 0.00 6.86
455 590 2.965462 AATAACTAGGCCGCGCGC 60.965 61.111 27.36 23.91 0.00 6.86
456 591 3.441011 AATAACTAGGCCGCGCGCT 62.441 57.895 30.48 19.89 37.74 5.92
457 592 2.079020 AATAACTAGGCCGCGCGCTA 62.079 55.000 30.48 19.95 37.74 4.26
458 593 2.079020 ATAACTAGGCCGCGCGCTAA 62.079 55.000 30.48 8.29 37.74 3.09
459 594 2.282147 TAACTAGGCCGCGCGCTAAA 62.282 55.000 30.48 8.70 37.74 1.85
460 595 2.888534 CTAGGCCGCGCGCTAAAA 60.889 61.111 30.48 9.63 37.74 1.52
461 596 2.202960 TAGGCCGCGCGCTAAAAT 60.203 55.556 30.48 13.42 37.74 1.82
462 597 2.159272 CTAGGCCGCGCGCTAAAATC 62.159 60.000 30.48 12.12 37.74 2.17
463 598 4.607606 GGCCGCGCGCTAAAATCC 62.608 66.667 30.48 15.85 37.74 3.01
464 599 4.938080 GCCGCGCGCTAAAATCCG 62.938 66.667 30.48 10.63 0.00 4.18
465 600 4.293626 CCGCGCGCTAAAATCCGG 62.294 66.667 30.48 16.37 0.00 5.14
466 601 4.293626 CGCGCGCTAAAATCCGGG 62.294 66.667 30.48 5.07 39.91 5.73
467 602 3.199891 GCGCGCTAAAATCCGGGT 61.200 61.111 26.67 0.00 39.25 5.28
468 603 2.757056 GCGCGCTAAAATCCGGGTT 61.757 57.895 26.67 0.00 39.25 4.11
469 604 1.798087 CGCGCTAAAATCCGGGTTT 59.202 52.632 6.94 6.94 33.46 3.27
470 605 0.169451 CGCGCTAAAATCCGGGTTTT 59.831 50.000 27.53 27.53 35.60 2.43
471 606 1.401800 CGCGCTAAAATCCGGGTTTTT 60.402 47.619 29.34 22.04 33.62 1.94
485 620 3.849064 TTTTTGGGTGCCGGACAG 58.151 55.556 5.05 0.00 0.00 3.51
486 621 2.494530 TTTTTGGGTGCCGGACAGC 61.495 57.895 5.05 12.82 46.36 4.40
487 622 2.920076 TTTTTGGGTGCCGGACAGCT 62.920 55.000 21.60 0.00 46.30 4.24
488 623 3.842925 TTTGGGTGCCGGACAGCTC 62.843 63.158 21.60 14.64 46.30 4.09
491 626 4.329545 GGTGCCGGACAGCTCCAA 62.330 66.667 5.05 0.00 44.17 3.53
492 627 3.050275 GTGCCGGACAGCTCCAAC 61.050 66.667 5.05 0.00 36.12 3.77
493 628 3.555324 TGCCGGACAGCTCCAACA 61.555 61.111 5.05 0.00 36.12 3.33
494 629 2.281484 GCCGGACAGCTCCAACAA 60.281 61.111 5.05 0.00 36.12 2.83
495 630 1.896660 GCCGGACAGCTCCAACAAA 60.897 57.895 5.05 0.00 36.12 2.83
496 631 1.452145 GCCGGACAGCTCCAACAAAA 61.452 55.000 5.05 0.00 36.12 2.44
497 632 0.593128 CCGGACAGCTCCAACAAAAG 59.407 55.000 0.00 0.00 36.12 2.27
498 633 0.040067 CGGACAGCTCCAACAAAAGC 60.040 55.000 0.00 0.00 36.12 3.51
506 641 4.682787 AGCTCCAACAAAAGCTGTAAAAC 58.317 39.130 0.00 0.00 46.78 2.43
507 642 4.159506 AGCTCCAACAAAAGCTGTAAAACA 59.840 37.500 0.00 0.00 46.78 2.83
508 643 5.679638 AGCTCCAACAAAAGCTGTAAAACAG 60.680 40.000 2.65 2.65 46.78 3.16
515 650 4.115287 CTGTAAAACAGTGCGCGC 57.885 55.556 27.26 27.26 41.19 6.86
516 651 1.788203 CTGTAAAACAGTGCGCGCG 60.788 57.895 28.44 28.44 41.19 6.86
517 652 3.156879 GTAAAACAGTGCGCGCGC 61.157 61.111 45.02 45.02 42.35 6.86
537 672 1.358759 AAAAAGAGTTGGGCGTGCG 59.641 52.632 0.00 0.00 0.00 5.34
538 673 2.677573 AAAAAGAGTTGGGCGTGCGC 62.678 55.000 8.17 8.17 41.06 6.09
539 674 4.626081 AAGAGTTGGGCGTGCGCT 62.626 61.111 16.21 0.00 41.60 5.92
542 677 4.927782 AGTTGGGCGTGCGCTGAA 62.928 61.111 16.21 6.62 41.60 3.02
543 678 3.959975 GTTGGGCGTGCGCTGAAA 61.960 61.111 16.21 5.89 41.60 2.69
544 679 3.212682 TTGGGCGTGCGCTGAAAA 61.213 55.556 16.21 3.60 41.60 2.29
545 680 2.775856 TTGGGCGTGCGCTGAAAAA 61.776 52.632 16.21 1.99 41.60 1.94
546 681 2.729491 GGGCGTGCGCTGAAAAAC 60.729 61.111 16.21 0.00 41.60 2.43
547 682 3.091022 GGCGTGCGCTGAAAAACG 61.091 61.111 16.21 10.43 41.60 3.60
548 683 2.351888 GCGTGCGCTGAAAAACGT 60.352 55.556 9.73 0.00 38.28 3.99
549 684 1.937362 GCGTGCGCTGAAAAACGTT 60.937 52.632 9.73 0.00 38.28 3.99
550 685 0.655048 GCGTGCGCTGAAAAACGTTA 60.655 50.000 9.73 0.00 38.28 3.18
551 686 1.945207 CGTGCGCTGAAAAACGTTAT 58.055 45.000 9.73 0.00 0.00 1.89
552 687 1.896193 CGTGCGCTGAAAAACGTTATC 59.104 47.619 9.73 4.01 0.00 1.75
553 688 2.660631 CGTGCGCTGAAAAACGTTATCA 60.661 45.455 9.73 13.97 0.00 2.15
554 689 3.293262 GTGCGCTGAAAAACGTTATCAA 58.707 40.909 9.73 1.54 0.00 2.57
555 690 3.726730 GTGCGCTGAAAAACGTTATCAAA 59.273 39.130 9.73 2.78 0.00 2.69
556 691 4.205385 GTGCGCTGAAAAACGTTATCAAAA 59.795 37.500 9.73 2.51 0.00 2.44
557 692 4.439449 TGCGCTGAAAAACGTTATCAAAAG 59.561 37.500 9.73 11.05 0.00 2.27
558 693 4.660661 GCGCTGAAAAACGTTATCAAAAGC 60.661 41.667 15.11 15.23 0.00 3.51
559 694 4.675114 CGCTGAAAAACGTTATCAAAAGCT 59.325 37.500 15.11 0.00 0.00 3.74
560 695 5.386323 CGCTGAAAAACGTTATCAAAAGCTG 60.386 40.000 15.11 9.42 0.00 4.24
561 696 5.610338 GCTGAAAAACGTTATCAAAAGCTGC 60.610 40.000 15.11 11.03 0.00 5.25
562 697 5.344066 TGAAAAACGTTATCAAAAGCTGCA 58.656 33.333 12.72 0.00 0.00 4.41
563 698 5.807520 TGAAAAACGTTATCAAAAGCTGCAA 59.192 32.000 12.72 0.00 0.00 4.08
564 699 6.311445 TGAAAAACGTTATCAAAAGCTGCAAA 59.689 30.769 12.72 0.00 0.00 3.68
565 700 6.843069 AAAACGTTATCAAAAGCTGCAAAT 57.157 29.167 0.00 0.00 0.00 2.32
566 701 6.843069 AAACGTTATCAAAAGCTGCAAATT 57.157 29.167 0.00 0.00 0.00 1.82
567 702 6.843069 AACGTTATCAAAAGCTGCAAATTT 57.157 29.167 0.00 0.00 0.00 1.82
568 703 6.214205 ACGTTATCAAAAGCTGCAAATTTG 57.786 33.333 14.03 14.03 35.81 2.32
569 704 5.982516 ACGTTATCAAAAGCTGCAAATTTGA 59.017 32.000 22.31 21.80 44.44 2.69
570 705 6.144402 ACGTTATCAAAAGCTGCAAATTTGAG 59.856 34.615 22.31 15.72 43.81 3.02
571 706 6.400303 CGTTATCAAAAGCTGCAAATTTGAGG 60.400 38.462 22.31 13.30 43.81 3.86
572 707 3.132925 TCAAAAGCTGCAAATTTGAGGC 58.867 40.909 22.31 21.29 37.95 4.70
573 708 1.787012 AAAGCTGCAAATTTGAGGCG 58.213 45.000 22.31 7.14 34.24 5.52
574 709 0.668401 AAGCTGCAAATTTGAGGCGC 60.668 50.000 22.31 15.67 34.24 6.53
575 710 2.096442 GCTGCAAATTTGAGGCGCC 61.096 57.895 21.89 21.89 0.00 6.53
576 711 1.802715 CTGCAAATTTGAGGCGCCG 60.803 57.895 23.20 4.86 0.00 6.46
577 712 2.506881 GCAAATTTGAGGCGCCGG 60.507 61.111 23.20 0.00 0.00 6.13
578 713 2.988688 GCAAATTTGAGGCGCCGGA 61.989 57.895 23.20 8.86 0.00 5.14
579 714 1.809207 CAAATTTGAGGCGCCGGAT 59.191 52.632 23.20 10.90 0.00 4.18
580 715 0.173255 CAAATTTGAGGCGCCGGATT 59.827 50.000 23.20 16.29 0.00 3.01
581 716 0.173255 AAATTTGAGGCGCCGGATTG 59.827 50.000 23.20 0.00 0.00 2.67
582 717 2.283472 AATTTGAGGCGCCGGATTGC 62.283 55.000 23.20 5.21 0.00 3.56
593 728 4.179579 GGATTGCGGGCGCTTCAC 62.180 66.667 7.64 0.00 42.51 3.18
594 729 3.430862 GATTGCGGGCGCTTCACA 61.431 61.111 7.64 0.00 42.51 3.58
595 730 2.976840 GATTGCGGGCGCTTCACAA 61.977 57.895 7.64 7.76 42.51 3.33
596 731 2.270297 GATTGCGGGCGCTTCACAAT 62.270 55.000 7.64 12.43 42.51 2.71
597 732 1.876497 ATTGCGGGCGCTTCACAATT 61.876 50.000 7.64 0.00 42.51 2.32
598 733 2.081425 TTGCGGGCGCTTCACAATTT 62.081 50.000 7.64 0.00 42.51 1.82
599 734 1.237954 TGCGGGCGCTTCACAATTTA 61.238 50.000 7.64 0.00 42.51 1.40
600 735 0.796870 GCGGGCGCTTCACAATTTAC 60.797 55.000 7.64 0.00 38.26 2.01
601 736 0.519519 CGGGCGCTTCACAATTTACA 59.480 50.000 7.64 0.00 0.00 2.41
602 737 1.727857 CGGGCGCTTCACAATTTACAC 60.728 52.381 7.64 0.00 0.00 2.90
603 738 1.539827 GGGCGCTTCACAATTTACACT 59.460 47.619 7.64 0.00 0.00 3.55
604 739 2.584791 GGCGCTTCACAATTTACACTG 58.415 47.619 7.64 0.00 0.00 3.66
605 740 1.978782 GCGCTTCACAATTTACACTGC 59.021 47.619 0.00 0.00 0.00 4.40
606 741 2.233355 CGCTTCACAATTTACACTGCG 58.767 47.619 0.00 0.00 35.22 5.18
607 742 2.349438 CGCTTCACAATTTACACTGCGT 60.349 45.455 0.00 0.00 36.78 5.24
608 743 2.973224 GCTTCACAATTTACACTGCGTG 59.027 45.455 7.07 7.07 39.75 5.34
610 745 4.597079 CTTCACAATTTACACTGCGTGTT 58.403 39.130 17.12 0.33 45.08 3.32
611 746 4.203950 TCACAATTTACACTGCGTGTTC 57.796 40.909 17.12 0.00 45.08 3.18
612 747 3.874543 TCACAATTTACACTGCGTGTTCT 59.125 39.130 17.12 3.25 45.08 3.01
613 748 4.334203 TCACAATTTACACTGCGTGTTCTT 59.666 37.500 17.12 7.95 45.08 2.52
614 749 5.034152 CACAATTTACACTGCGTGTTCTTT 58.966 37.500 17.12 7.81 45.08 2.52
615 750 5.514914 CACAATTTACACTGCGTGTTCTTTT 59.485 36.000 17.12 6.47 45.08 2.27
616 751 5.514914 ACAATTTACACTGCGTGTTCTTTTG 59.485 36.000 17.12 16.21 45.08 2.44
617 752 3.684103 TTACACTGCGTGTTCTTTTGG 57.316 42.857 17.12 0.00 45.08 3.28
618 753 0.738389 ACACTGCGTGTTCTTTTGGG 59.262 50.000 8.25 0.00 45.08 4.12
619 754 0.594796 CACTGCGTGTTCTTTTGGGC 60.595 55.000 1.24 0.00 0.00 5.36
620 755 1.370414 CTGCGTGTTCTTTTGGGCG 60.370 57.895 0.00 0.00 0.00 6.13
621 756 2.729491 GCGTGTTCTTTTGGGCGC 60.729 61.111 0.00 0.00 38.15 6.53
622 757 2.426752 CGTGTTCTTTTGGGCGCG 60.427 61.111 0.00 0.00 0.00 6.86
623 758 2.729491 GTGTTCTTTTGGGCGCGC 60.729 61.111 25.94 25.94 0.00 6.86
624 759 3.212682 TGTTCTTTTGGGCGCGCA 61.213 55.556 34.42 24.55 0.00 6.09
625 760 2.258286 GTTCTTTTGGGCGCGCAT 59.742 55.556 34.42 0.00 0.00 4.73
626 761 1.372872 GTTCTTTTGGGCGCGCATT 60.373 52.632 34.42 0.00 0.00 3.56
627 762 0.943835 GTTCTTTTGGGCGCGCATTT 60.944 50.000 34.42 0.00 0.00 2.32
628 763 0.249657 TTCTTTTGGGCGCGCATTTT 60.250 45.000 34.42 0.00 0.00 1.82
629 764 0.249657 TCTTTTGGGCGCGCATTTTT 60.250 45.000 34.42 0.00 0.00 1.94
630 765 0.110733 CTTTTGGGCGCGCATTTTTG 60.111 50.000 34.42 14.42 0.00 2.44
631 766 1.502163 TTTTGGGCGCGCATTTTTGG 61.502 50.000 34.42 0.00 0.00 3.28
632 767 3.873026 TTGGGCGCGCATTTTTGGG 62.873 57.895 34.42 0.00 0.00 4.12
635 770 2.814776 GCGCGCATTTTTGGGCAT 60.815 55.556 29.10 0.00 46.30 4.40
636 771 2.801624 GCGCGCATTTTTGGGCATC 61.802 57.895 29.10 0.00 46.30 3.91
637 772 1.153784 CGCGCATTTTTGGGCATCT 60.154 52.632 8.75 0.00 46.30 2.90
638 773 1.415288 CGCGCATTTTTGGGCATCTG 61.415 55.000 8.75 0.00 46.30 2.90
639 774 1.698714 GCGCATTTTTGGGCATCTGC 61.699 55.000 0.30 0.00 45.45 4.26
640 775 0.108520 CGCATTTTTGGGCATCTGCT 60.109 50.000 1.70 0.00 41.70 4.24
641 776 1.134753 CGCATTTTTGGGCATCTGCTA 59.865 47.619 1.70 0.00 41.70 3.49
642 777 2.417107 CGCATTTTTGGGCATCTGCTAA 60.417 45.455 1.70 0.00 41.70 3.09
643 778 3.598299 GCATTTTTGGGCATCTGCTAAA 58.402 40.909 1.70 2.21 41.70 1.85
644 779 3.619929 GCATTTTTGGGCATCTGCTAAAG 59.380 43.478 1.70 0.00 41.70 1.85
645 780 3.317603 TTTTTGGGCATCTGCTAAAGC 57.682 42.857 1.70 0.00 41.70 3.51
656 791 3.767287 GCTAAAGCAACGTTGGGTC 57.233 52.632 28.33 12.87 41.59 4.46
657 792 0.110373 GCTAAAGCAACGTTGGGTCG 60.110 55.000 28.33 4.24 41.59 4.79
658 793 0.515564 CTAAAGCAACGTTGGGTCGG 59.484 55.000 28.33 3.46 34.94 4.79
659 794 1.508808 TAAAGCAACGTTGGGTCGGC 61.509 55.000 28.33 13.74 34.94 5.54
660 795 4.555709 AGCAACGTTGGGTCGGCA 62.556 61.111 28.33 0.00 32.86 5.69
661 796 4.322385 GCAACGTTGGGTCGGCAC 62.322 66.667 28.33 6.48 34.94 5.01
662 797 2.897846 CAACGTTGGGTCGGCACA 60.898 61.111 20.71 0.00 34.94 4.57
663 798 2.898343 AACGTTGGGTCGGCACAC 60.898 61.111 0.00 0.00 34.94 3.82
664 799 3.394635 AACGTTGGGTCGGCACACT 62.395 57.895 0.00 0.00 34.94 3.55
665 800 2.030490 AACGTTGGGTCGGCACACTA 62.030 55.000 0.00 0.00 34.94 2.74
666 801 1.301087 CGTTGGGTCGGCACACTAA 60.301 57.895 0.00 0.00 0.00 2.24
667 802 0.881159 CGTTGGGTCGGCACACTAAA 60.881 55.000 0.00 0.00 0.00 1.85
668 803 1.310904 GTTGGGTCGGCACACTAAAA 58.689 50.000 0.00 0.00 0.00 1.52
669 804 1.265905 GTTGGGTCGGCACACTAAAAG 59.734 52.381 0.00 0.00 0.00 2.27
670 805 0.470766 TGGGTCGGCACACTAAAAGT 59.529 50.000 0.00 0.00 0.00 2.66
681 816 3.813529 CACTAAAAGTGCTACAGTGGC 57.186 47.619 0.99 0.99 39.62 5.01
682 817 2.157668 CACTAAAAGTGCTACAGTGGCG 59.842 50.000 4.21 0.00 39.62 5.69
683 818 1.128692 CTAAAAGTGCTACAGTGGCGC 59.871 52.381 14.31 14.31 40.08 6.53
684 819 1.841663 AAAAGTGCTACAGTGGCGCG 61.842 55.000 15.94 0.00 43.87 6.86
687 822 3.754530 TGCTACAGTGGCGCGCTA 61.755 61.111 32.29 24.64 0.00 4.26
688 823 2.508439 GCTACAGTGGCGCGCTAA 60.508 61.111 32.29 17.34 0.00 3.09
689 824 2.098233 GCTACAGTGGCGCGCTAAA 61.098 57.895 32.29 14.50 0.00 1.85
690 825 1.632046 GCTACAGTGGCGCGCTAAAA 61.632 55.000 32.29 11.71 0.00 1.52
691 826 0.094730 CTACAGTGGCGCGCTAAAAC 59.905 55.000 32.29 22.40 0.00 2.43
692 827 0.320073 TACAGTGGCGCGCTAAAACT 60.320 50.000 32.29 24.17 0.00 2.66
693 828 0.320073 ACAGTGGCGCGCTAAAACTA 60.320 50.000 32.29 5.94 0.00 2.24
694 829 1.006832 CAGTGGCGCGCTAAAACTAT 58.993 50.000 32.29 4.36 0.00 2.12
695 830 1.396996 CAGTGGCGCGCTAAAACTATT 59.603 47.619 32.29 6.16 0.00 1.73
696 831 2.081462 AGTGGCGCGCTAAAACTATTT 58.919 42.857 32.29 5.82 0.00 1.40
697 832 2.486592 AGTGGCGCGCTAAAACTATTTT 59.513 40.909 32.29 5.46 36.67 1.82
698 833 3.685756 AGTGGCGCGCTAAAACTATTTTA 59.314 39.130 32.29 0.00 34.19 1.52
707 842 5.473796 CTAAAACTATTTTAGGGCGCGAA 57.526 39.130 12.10 0.00 45.21 4.70
708 843 4.769859 AAAACTATTTTAGGGCGCGAAA 57.230 36.364 12.10 4.94 0.00 3.46
709 844 4.976224 AAACTATTTTAGGGCGCGAAAT 57.024 36.364 12.10 9.25 0.00 2.17
710 845 4.976224 AACTATTTTAGGGCGCGAAATT 57.024 36.364 12.10 13.46 0.00 1.82
711 846 4.976224 ACTATTTTAGGGCGCGAAATTT 57.024 36.364 12.10 9.37 0.00 1.82
712 847 5.319140 ACTATTTTAGGGCGCGAAATTTT 57.681 34.783 12.10 7.47 0.00 1.82
713 848 5.716094 ACTATTTTAGGGCGCGAAATTTTT 58.284 33.333 12.10 5.60 0.00 1.94
714 849 6.854778 ACTATTTTAGGGCGCGAAATTTTTA 58.145 32.000 12.10 2.76 0.00 1.52
715 850 7.485810 ACTATTTTAGGGCGCGAAATTTTTAT 58.514 30.769 12.10 8.76 0.00 1.40
716 851 6.582437 ATTTTAGGGCGCGAAATTTTTATG 57.418 33.333 12.10 0.00 0.00 1.90
717 852 1.921243 AGGGCGCGAAATTTTTATGC 58.079 45.000 12.10 0.00 0.00 3.14
718 853 1.203523 AGGGCGCGAAATTTTTATGCA 59.796 42.857 12.10 0.00 0.00 3.96
719 854 1.323235 GGGCGCGAAATTTTTATGCAC 59.677 47.619 12.10 0.00 0.00 4.57
720 855 1.323235 GGCGCGAAATTTTTATGCACC 59.677 47.619 12.10 0.00 0.00 5.01
721 856 1.323235 GCGCGAAATTTTTATGCACCC 59.677 47.619 12.10 0.00 0.00 4.61
722 857 1.581602 CGCGAAATTTTTATGCACCCG 59.418 47.619 0.00 0.00 0.00 5.28
723 858 2.601804 GCGAAATTTTTATGCACCCGT 58.398 42.857 0.00 0.00 0.00 5.28
724 859 2.990514 GCGAAATTTTTATGCACCCGTT 59.009 40.909 0.00 0.00 0.00 4.44
725 860 3.181535 GCGAAATTTTTATGCACCCGTTG 60.182 43.478 0.00 0.00 0.00 4.10
726 861 3.366422 CGAAATTTTTATGCACCCGTTGG 59.634 43.478 0.00 0.00 37.80 3.77
727 862 4.561105 GAAATTTTTATGCACCCGTTGGA 58.439 39.130 0.00 0.00 34.81 3.53
728 863 3.866883 ATTTTTATGCACCCGTTGGAG 57.133 42.857 0.00 0.00 34.81 3.86
729 864 2.570415 TTTTATGCACCCGTTGGAGA 57.430 45.000 0.00 0.00 34.81 3.71
730 865 2.799126 TTTATGCACCCGTTGGAGAT 57.201 45.000 0.00 0.00 34.81 2.75
731 866 2.036958 TTATGCACCCGTTGGAGATG 57.963 50.000 0.00 0.00 34.81 2.90
732 867 0.463654 TATGCACCCGTTGGAGATGC 60.464 55.000 0.00 0.00 36.81 3.91
733 868 2.045926 GCACCCGTTGGAGATGCT 60.046 61.111 0.00 0.00 33.44 3.79
734 869 2.109126 GCACCCGTTGGAGATGCTC 61.109 63.158 0.00 0.00 33.44 4.26
759 894 8.832521 TCTAAAGGTGTATATAATTTTGTGGCG 58.167 33.333 0.00 0.00 0.00 5.69
834 969 6.322491 AGTTCAAAGTTCACTTTAGTTGTGC 58.678 36.000 4.61 0.00 43.72 4.57
835 970 6.151144 AGTTCAAAGTTCACTTTAGTTGTGCT 59.849 34.615 4.61 0.00 43.72 4.40
836 971 6.509418 TCAAAGTTCACTTTAGTTGTGCTT 57.491 33.333 4.61 0.00 43.72 3.91
850 985 2.359850 GCTTGGGGACGCACATGA 60.360 61.111 0.00 0.00 0.00 3.07
881 1016 1.202592 TGTTGTCTTAGCTGCGACCAA 60.203 47.619 12.79 6.45 0.00 3.67
890 1025 3.632700 TGCGACCAAGCAACGTAC 58.367 55.556 0.00 0.00 45.06 3.67
934 1069 4.082245 ACAAATTCCTTCGGTGCTAAATGG 60.082 41.667 0.00 0.00 0.00 3.16
970 1105 1.954382 CGGCTAGCATGTACTCCTACA 59.046 52.381 18.24 0.00 37.28 2.74
971 1106 2.558795 CGGCTAGCATGTACTCCTACAT 59.441 50.000 18.24 0.00 43.30 2.29
972 1107 3.756963 CGGCTAGCATGTACTCCTACATA 59.243 47.826 18.24 0.00 40.99 2.29
973 1108 4.399618 CGGCTAGCATGTACTCCTACATAT 59.600 45.833 18.24 0.00 40.99 1.78
1035 1171 4.561606 CGACCTATCGGTTTTACTCTTGTG 59.438 45.833 0.00 0.00 45.73 3.33
1051 1187 5.047235 ACTCTTGTGTGTAATGGACTACTCC 60.047 44.000 0.00 0.00 37.04 3.85
1226 1362 1.134037 GCACCAATTCCACCCGGTATA 60.134 52.381 0.00 0.00 0.00 1.47
1235 1371 3.649843 TCCACCCGGTATAATGTCTTCT 58.350 45.455 0.00 0.00 0.00 2.85
1240 1376 6.214399 CACCCGGTATAATGTCTTCTTCTAC 58.786 44.000 0.00 0.00 0.00 2.59
1276 1412 2.034879 CCTGGCGTCGCTTGTCATT 61.035 57.895 18.11 0.00 0.00 2.57
1279 1415 0.319986 TGGCGTCGCTTGTCATTGTA 60.320 50.000 18.11 0.00 0.00 2.41
1284 1420 2.415168 CGTCGCTTGTCATTGTAATGGT 59.585 45.455 4.89 0.00 37.03 3.55
1360 1496 1.448540 CATGGTGCTCGACCTGGTC 60.449 63.158 16.99 16.99 46.32 4.02
1429 1565 2.824041 GTCTACGTCCCGGCGGTA 60.824 66.667 26.32 5.99 35.98 4.02
1501 1637 2.031012 CTGAAGAGTGGCCACGCA 59.969 61.111 36.38 26.40 36.20 5.24
1504 1640 3.240134 GAAGAGTGGCCACGCAGGA 62.240 63.158 36.38 0.00 41.22 3.86
1552 1688 4.452733 GGACGGTGGAAGCTCCCG 62.453 72.222 11.21 11.21 46.93 5.14
1630 1766 2.979649 GGGTCCTGGTTCGACTCC 59.020 66.667 0.00 0.00 0.00 3.85
1631 1767 1.911766 GGGTCCTGGTTCGACTCCA 60.912 63.158 8.05 8.05 0.00 3.86
1689 1825 4.301027 GCGCATCTACCCCCTCCG 62.301 72.222 0.30 0.00 0.00 4.63
1705 1841 3.516615 CCTCCGCTACTTCTTCTTCTTG 58.483 50.000 0.00 0.00 0.00 3.02
1715 1851 6.942532 ACTTCTTCTTCTTGTTATGCAACA 57.057 33.333 0.00 0.00 42.93 3.33
1717 1853 5.342806 TCTTCTTCTTGTTATGCAACACG 57.657 39.130 0.00 0.00 44.28 4.49
1747 1883 0.738975 TGTCGTCCCTCGTCATCATC 59.261 55.000 0.00 0.00 40.80 2.92
1779 1915 4.007644 CAGGTCGCTGAGTGGCCA 62.008 66.667 19.92 0.00 40.71 5.36
1904 2040 2.511452 ATCATCTTCCTCGCCGGGG 61.511 63.158 13.31 13.31 0.00 5.73
1930 2066 0.460109 TCGTGATCATTGCCCTCGTG 60.460 55.000 0.00 0.00 0.00 4.35
1950 2086 4.332819 CGTGGGAAAATTCTCTATGGACAC 59.667 45.833 0.00 0.00 0.00 3.67
1962 2098 6.401394 TCTCTATGGACACAGTCAAGAAATG 58.599 40.000 0.00 0.00 33.68 2.32
2012 2148 2.884087 ATCACCGCACGAGTAAGCCG 62.884 60.000 0.00 0.00 0.00 5.52
2034 2170 0.323087 ATGCATGCACCTTGCTCTCA 60.323 50.000 25.37 0.00 45.31 3.27
2052 2188 5.447818 GCTCTCATTTTTCATTCGGTCGATT 60.448 40.000 0.00 0.00 0.00 3.34
2156 2292 3.419759 CAAACGAAGGCGACGGGG 61.420 66.667 10.48 0.00 41.64 5.73
2278 2414 1.162181 ATTGGCGCGATGAGGACATG 61.162 55.000 12.10 0.00 36.82 3.21
2279 2415 3.643978 GGCGCGATGAGGACATGC 61.644 66.667 12.10 0.00 36.82 4.06
2584 2723 1.146930 CATCATACTGGGCAGCGGT 59.853 57.895 0.00 0.00 0.00 5.68
2690 2838 2.756907 CCCAATCCAAGAGAGAGGAGA 58.243 52.381 0.00 0.00 37.34 3.71
2842 2993 1.478510 CACCTCACTGATACGCTCCTT 59.521 52.381 0.00 0.00 0.00 3.36
2908 3059 2.892425 GCGGAGTTCATGGCCTCG 60.892 66.667 3.32 0.00 0.00 4.63
2968 3119 7.380253 GCACAAGCAAAGCATACGGAGTAAT 62.380 44.000 0.00 0.00 43.92 1.89
3346 3497 4.424711 GGCACCTGGGCCGAATCA 62.425 66.667 9.92 0.00 45.40 2.57
3427 3578 1.063174 GCCTTCTTCTACTGCAATGCG 59.937 52.381 0.00 0.00 0.00 4.73
3598 3749 1.153628 GGAGCAGGTGTTCGCGTAT 60.154 57.895 5.77 0.00 0.00 3.06
3708 3865 2.001269 CCACCCCCGATTCTTCCCT 61.001 63.158 0.00 0.00 0.00 4.20
3733 3890 2.234414 CCCAGTTGGCAGCATTGTTAAT 59.766 45.455 3.63 0.00 0.00 1.40
3758 3915 6.430000 TGAGTTGTAGCTTGTTATTCTTTCCC 59.570 38.462 0.00 0.00 0.00 3.97
3759 3916 6.303839 AGTTGTAGCTTGTTATTCTTTCCCA 58.696 36.000 0.00 0.00 0.00 4.37
3780 3937 7.001674 TCCCAAACTTGTATGAGTGTGTATTT 58.998 34.615 0.00 0.00 33.80 1.40
3782 3939 7.040755 CCCAAACTTGTATGAGTGTGTATTTGA 60.041 37.037 0.00 0.00 33.80 2.69
3783 3940 8.514594 CCAAACTTGTATGAGTGTGTATTTGAT 58.485 33.333 0.00 0.00 33.80 2.57
3796 3953 7.829211 AGTGTGTATTTGATATACTGTGCCTTT 59.171 33.333 0.00 0.00 0.00 3.11
3803 3960 6.056090 TGATATACTGTGCCTTTTGTGGTA 57.944 37.500 0.00 0.00 0.00 3.25
3810 3967 1.140452 TGCCTTTTGTGGTACGGTACA 59.860 47.619 19.14 0.00 0.00 2.90
3811 3968 1.802365 GCCTTTTGTGGTACGGTACAG 59.198 52.381 19.14 7.25 0.00 2.74
3812 3969 2.807837 GCCTTTTGTGGTACGGTACAGT 60.808 50.000 19.14 3.62 0.00 3.55
3813 3970 3.554752 GCCTTTTGTGGTACGGTACAGTA 60.555 47.826 19.14 1.38 0.00 2.74
3814 3971 4.824289 CCTTTTGTGGTACGGTACAGTAT 58.176 43.478 19.14 0.00 0.00 2.12
3815 3972 4.628333 CCTTTTGTGGTACGGTACAGTATG 59.372 45.833 19.14 3.97 46.00 2.39
3834 3991 0.297820 GTCGCTGTAAATTCCGCTCG 59.702 55.000 0.00 0.00 0.00 5.03
3861 4018 6.109359 GTGGCTTTCTAGTCATGTGAACTAT 58.891 40.000 0.00 0.00 38.47 2.12
3862 4019 7.093509 TGTGGCTTTCTAGTCATGTGAACTATA 60.094 37.037 0.00 0.00 38.47 1.31
3863 4020 7.436673 GTGGCTTTCTAGTCATGTGAACTATAG 59.563 40.741 0.00 0.00 38.47 1.31
3864 4021 7.342026 TGGCTTTCTAGTCATGTGAACTATAGA 59.658 37.037 6.78 0.00 29.10 1.98
3865 4022 8.364142 GGCTTTCTAGTCATGTGAACTATAGAT 58.636 37.037 6.78 0.00 0.00 1.98
3888 4045 9.391227 AGATATGTGATCTCCTATTTTCCTCTT 57.609 33.333 0.00 0.00 0.00 2.85
3890 4047 5.431765 TGTGATCTCCTATTTTCCTCTTGC 58.568 41.667 0.00 0.00 0.00 4.01
3891 4048 4.819088 GTGATCTCCTATTTTCCTCTTGCC 59.181 45.833 0.00 0.00 0.00 4.52
3892 4049 3.543680 TCTCCTATTTTCCTCTTGCCG 57.456 47.619 0.00 0.00 0.00 5.69
3896 4053 4.261801 TCCTATTTTCCTCTTGCCGAAAG 58.738 43.478 0.00 0.00 37.22 2.62
3897 4054 4.019681 TCCTATTTTCCTCTTGCCGAAAGA 60.020 41.667 1.32 1.32 42.83 2.52
3911 4068 1.602377 CGAAAGAGGCTTTTGTTCCGT 59.398 47.619 0.00 0.00 0.00 4.69
3912 4069 2.032924 CGAAAGAGGCTTTTGTTCCGTT 59.967 45.455 0.00 0.00 0.00 4.44
3913 4070 3.488553 CGAAAGAGGCTTTTGTTCCGTTT 60.489 43.478 0.00 0.00 0.00 3.60
3914 4071 4.430007 GAAAGAGGCTTTTGTTCCGTTTT 58.570 39.130 0.00 0.00 0.00 2.43
3915 4072 5.584442 GAAAGAGGCTTTTGTTCCGTTTTA 58.416 37.500 0.00 0.00 0.00 1.52
3955 4112 6.632834 GCATAAAGCACGACCAAACATATAAG 59.367 38.462 0.00 0.00 44.79 1.73
3956 4113 7.678690 GCATAAAGCACGACCAAACATATAAGT 60.679 37.037 0.00 0.00 44.79 2.24
3983 4140 3.058914 GCACGCTACAGAAAATCACAACT 60.059 43.478 0.00 0.00 0.00 3.16
3999 4159 2.238646 ACAACTCACACTCACCCAAGAA 59.761 45.455 0.00 0.00 0.00 2.52
4002 4162 3.963129 ACTCACACTCACCCAAGAAAAA 58.037 40.909 0.00 0.00 0.00 1.94
4027 4187 4.389374 ACATAGGTGTCAAAGACCAACAG 58.611 43.478 0.00 0.00 35.76 3.16
4031 4191 2.479560 GGTGTCAAAGACCAACAGCAAC 60.480 50.000 0.00 0.00 40.26 4.17
4033 4193 2.822561 TGTCAAAGACCAACAGCAACAA 59.177 40.909 0.00 0.00 0.00 2.83
4036 4196 3.256879 TCAAAGACCAACAGCAACAACAA 59.743 39.130 0.00 0.00 0.00 2.83
4043 4203 2.378445 ACAGCAACAACAACCCAAAC 57.622 45.000 0.00 0.00 0.00 2.93
4048 4208 2.672760 GCAACAACAACCCAAACGACTT 60.673 45.455 0.00 0.00 0.00 3.01
4053 4213 2.718563 ACAACCCAAACGACTTGAAGT 58.281 42.857 0.00 0.00 37.17 3.01
4058 4218 3.387050 ACCCAAACGACTTGAAGTAGACT 59.613 43.478 12.38 0.00 37.17 3.24
4067 4227 6.030849 CGACTTGAAGTAGACTACAGAATGG 58.969 44.000 14.95 3.37 43.62 3.16
4092 4252 1.448013 GCACCACTAAGGAGCCGTC 60.448 63.158 0.00 0.00 46.94 4.79
4127 4287 1.149148 GAAAGACACCGTGAAGAGGC 58.851 55.000 5.28 0.00 0.00 4.70
4141 4301 4.024048 GTGAAGAGGCGATTTTCAAAGTCA 60.024 41.667 0.00 0.00 33.10 3.41
4142 4302 4.214119 TGAAGAGGCGATTTTCAAAGTCAG 59.786 41.667 0.00 0.00 0.00 3.51
4147 4307 4.023707 AGGCGATTTTCAAAGTCAGTGAAG 60.024 41.667 0.00 0.00 36.41 3.02
4148 4308 3.665871 GCGATTTTCAAAGTCAGTGAAGC 59.334 43.478 0.00 0.00 36.41 3.86
4149 4309 3.902465 CGATTTTCAAAGTCAGTGAAGCG 59.098 43.478 0.00 0.00 36.41 4.68
4150 4310 4.552767 CGATTTTCAAAGTCAGTGAAGCGT 60.553 41.667 0.00 0.00 36.41 5.07
4151 4311 3.673746 TTTCAAAGTCAGTGAAGCGTG 57.326 42.857 0.00 0.00 36.41 5.34
4152 4312 2.595124 TCAAAGTCAGTGAAGCGTGA 57.405 45.000 0.00 0.00 0.00 4.35
4153 4313 3.111853 TCAAAGTCAGTGAAGCGTGAT 57.888 42.857 0.00 0.00 0.00 3.06
4154 4314 3.059884 TCAAAGTCAGTGAAGCGTGATC 58.940 45.455 0.00 0.00 0.00 2.92
4155 4315 3.062763 CAAAGTCAGTGAAGCGTGATCT 58.937 45.455 0.00 0.00 0.00 2.75
4156 4316 3.393089 AAGTCAGTGAAGCGTGATCTT 57.607 42.857 0.00 0.00 0.00 2.40
4181 4342 3.139077 GACGGTGTCTTCAAAAGGACAT 58.861 45.455 0.00 0.00 43.07 3.06
4212 4373 4.776322 CGCCACCGCCTGATCCAA 62.776 66.667 0.00 0.00 0.00 3.53
4231 4392 4.772100 TCCAAAGATCAAGATTTTCACCCC 59.228 41.667 0.00 0.00 0.00 4.95
4264 4425 0.307760 GACAAGAGCCAACCACAACG 59.692 55.000 0.00 0.00 0.00 4.10
4266 4427 1.528309 AAGAGCCAACCACAACGGG 60.528 57.895 0.00 0.00 40.22 5.28
4270 4431 2.513895 CCAACCACAACGGGGACT 59.486 61.111 0.00 0.00 40.22 3.85
4281 4442 3.215975 CAACGGGGACTTAAAAAGGTGA 58.784 45.455 0.00 0.00 0.00 4.02
4284 4445 2.548493 CGGGGACTTAAAAAGGTGACGA 60.548 50.000 0.00 0.00 0.00 4.20
4292 4453 0.872881 AAAAGGTGACGACGTCCACG 60.873 55.000 24.33 1.10 46.33 4.94
4331 4492 4.586235 ACCAAAGCCAGGCACGCT 62.586 61.111 15.80 0.00 38.53 5.07
4361 4522 1.453155 CAAGCATACTCCGCCTTTGT 58.547 50.000 0.00 0.00 0.00 2.83
4362 4523 1.398390 CAAGCATACTCCGCCTTTGTC 59.602 52.381 0.00 0.00 0.00 3.18
4372 4533 2.618165 GCCTTTGTCTATAGGGCGC 58.382 57.895 0.00 0.00 33.30 6.53
4395 4556 2.498167 CTAGGCACATGAACCATAGCC 58.502 52.381 0.00 12.05 41.46 3.93
4398 4559 1.375853 GCACATGAACCATAGCCGCA 61.376 55.000 0.00 0.00 0.00 5.69
4441 4602 0.975040 CTAGCCTCCTGCACCTGAGT 60.975 60.000 0.00 0.00 44.83 3.41
4443 4604 2.575993 CCTCCTGCACCTGAGTCG 59.424 66.667 0.00 0.00 0.00 4.18
4447 4608 2.029518 CTGCACCTGAGTCGCACA 59.970 61.111 0.00 0.00 0.00 4.57
4471 4632 2.093106 AGACCACGAGTACCACAGATC 58.907 52.381 0.00 0.00 0.00 2.75
4480 4641 1.628846 GTACCACAGATCCCACCACTT 59.371 52.381 0.00 0.00 0.00 3.16
4502 4663 4.594854 TGCCGCCCAGGAAGCAAA 62.595 61.111 0.00 0.00 45.00 3.68
4521 4682 0.988832 AACACCCTAAAGGCCATCGA 59.011 50.000 5.01 0.00 40.58 3.59
4539 4700 2.897326 TCGATGGATACGGGTGATGAAT 59.103 45.455 0.00 0.00 42.51 2.57
4553 4714 4.697352 GGTGATGAATTGCTACTTGTGAGT 59.303 41.667 0.00 0.00 39.97 3.41
4563 4724 1.101049 ACTTGTGAGTTGCGTTGGGG 61.101 55.000 0.00 0.00 29.87 4.96
4564 4725 1.795170 CTTGTGAGTTGCGTTGGGGG 61.795 60.000 0.00 0.00 0.00 5.40
4568 4729 0.684805 TGAGTTGCGTTGGGGGTTTT 60.685 50.000 0.00 0.00 0.00 2.43
4569 4730 0.462375 GAGTTGCGTTGGGGGTTTTT 59.538 50.000 0.00 0.00 0.00 1.94
4571 4732 0.531090 GTTGCGTTGGGGGTTTTTCC 60.531 55.000 0.00 0.00 0.00 3.13
4603 4764 5.489792 AGGGACATGCAATATAGTAGTGG 57.510 43.478 0.00 0.00 0.00 4.00
4637 4798 7.979786 TCCTCAGTAGAGAACCAAGATTATT 57.020 36.000 0.00 0.00 44.98 1.40
4670 4831 4.083003 GGAGATTCACGCAAACAACCATTA 60.083 41.667 0.00 0.00 0.00 1.90
4673 4834 4.371855 TTCACGCAAACAACCATTAACA 57.628 36.364 0.00 0.00 0.00 2.41
4700 4861 6.017109 CACCTACACACAAAAGAGCAAATACT 60.017 38.462 0.00 0.00 0.00 2.12
4724 4885 2.063774 CCAACACGGGTAAGAGGGT 58.936 57.895 0.00 0.00 0.00 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 8.178124 TCAAACTTGATGTATGATGGTGAACCA 61.178 37.037 4.29 4.29 40.54 3.67
46 47 7.144722 TCAAACTTGATGTATGATGGTGAAC 57.855 36.000 0.00 0.00 31.01 3.18
95 96 1.069703 CAATTGACAGGTGACGCACAG 60.070 52.381 0.00 6.32 35.86 3.66
108 109 5.163754 CCCGAGTTCAATTCCTACAATTGAC 60.164 44.000 13.59 5.74 43.81 3.18
112 113 4.514401 GACCCGAGTTCAATTCCTACAAT 58.486 43.478 0.00 0.00 0.00 2.71
150 151 2.278849 CTCAATGGTTGGGCATGCA 58.721 52.632 21.36 0.00 0.00 3.96
224 225 9.736023 CCTGGCAATAATTCTATTCACTTTTAC 57.264 33.333 0.00 0.00 0.00 2.01
248 249 9.981114 AGAATCGAACATTAAAAACAAATTCCT 57.019 25.926 0.00 0.00 0.00 3.36
294 429 1.256376 CGAGTGAGCATTCATACGTGC 59.744 52.381 0.00 0.00 41.57 5.34
304 439 2.223595 CCGTACTGAATCGAGTGAGCAT 60.224 50.000 0.00 0.00 0.00 3.79
373 508 5.010617 ACAACAAACGGGCAAGAAATTAGAT 59.989 36.000 0.00 0.00 0.00 1.98
398 533 6.109156 TGCTCTTAAATGAAGTGTAGGACA 57.891 37.500 0.00 0.00 36.45 4.02
403 538 6.946340 TGGAGATGCTCTTAAATGAAGTGTA 58.054 36.000 0.00 0.00 36.45 2.90
414 549 1.134699 CGCCTGTTGGAGATGCTCTTA 60.135 52.381 0.00 0.00 34.95 2.10
415 550 0.392193 CGCCTGTTGGAGATGCTCTT 60.392 55.000 0.00 0.00 34.95 2.85
416 551 1.220206 CGCCTGTTGGAGATGCTCT 59.780 57.895 0.00 0.00 34.95 4.09
417 552 2.467826 GCGCCTGTTGGAGATGCTC 61.468 63.158 0.00 0.00 34.95 4.26
418 553 2.437359 GCGCCTGTTGGAGATGCT 60.437 61.111 0.00 0.00 34.95 3.79
419 554 3.512516 GGCGCCTGTTGGAGATGC 61.513 66.667 22.15 0.00 34.95 3.91
420 555 2.825836 GGGCGCCTGTTGGAGATG 60.826 66.667 28.56 0.00 34.95 2.90
421 556 2.215451 ATTGGGCGCCTGTTGGAGAT 62.215 55.000 28.56 6.02 34.95 2.75
422 557 1.558167 TATTGGGCGCCTGTTGGAGA 61.558 55.000 28.56 3.75 34.95 3.71
423 558 0.679640 TTATTGGGCGCCTGTTGGAG 60.680 55.000 28.56 0.00 36.16 3.86
424 559 0.963355 GTTATTGGGCGCCTGTTGGA 60.963 55.000 28.56 5.58 34.57 3.53
425 560 0.965363 AGTTATTGGGCGCCTGTTGG 60.965 55.000 28.56 0.00 0.00 3.77
426 561 1.670811 CTAGTTATTGGGCGCCTGTTG 59.329 52.381 28.56 3.42 0.00 3.33
427 562 1.408266 CCTAGTTATTGGGCGCCTGTT 60.408 52.381 28.56 13.47 0.00 3.16
428 563 0.180406 CCTAGTTATTGGGCGCCTGT 59.820 55.000 28.56 14.96 0.00 4.00
429 564 1.166531 GCCTAGTTATTGGGCGCCTG 61.167 60.000 28.56 5.31 36.37 4.85
430 565 1.148498 GCCTAGTTATTGGGCGCCT 59.852 57.895 28.56 9.55 36.37 5.52
431 566 1.897137 GGCCTAGTTATTGGGCGCC 60.897 63.158 21.18 21.18 46.10 6.53
432 567 3.745912 GGCCTAGTTATTGGGCGC 58.254 61.111 0.00 0.00 46.10 6.53
434 569 2.251642 CGCGGCCTAGTTATTGGGC 61.252 63.158 0.00 0.00 44.59 5.36
435 570 2.251642 GCGCGGCCTAGTTATTGGG 61.252 63.158 8.83 0.00 0.00 4.12
436 571 2.594962 CGCGCGGCCTAGTTATTGG 61.595 63.158 24.84 0.00 0.00 3.16
437 572 2.928361 CGCGCGGCCTAGTTATTG 59.072 61.111 24.84 0.00 0.00 1.90
438 573 2.079020 TAGCGCGCGGCCTAGTTATT 62.079 55.000 33.06 5.80 45.17 1.40
439 574 2.079020 TTAGCGCGCGGCCTAGTTAT 62.079 55.000 33.06 6.40 45.17 1.89
440 575 2.282147 TTTAGCGCGCGGCCTAGTTA 62.282 55.000 33.06 6.92 45.17 2.24
441 576 3.652539 TTTAGCGCGCGGCCTAGTT 62.653 57.895 33.06 8.09 45.17 2.24
442 577 2.918230 ATTTTAGCGCGCGGCCTAGT 62.918 55.000 33.06 8.96 45.17 2.57
443 578 2.159272 GATTTTAGCGCGCGGCCTAG 62.159 60.000 33.06 1.90 45.17 3.02
444 579 2.202960 ATTTTAGCGCGCGGCCTA 60.203 55.556 33.06 21.75 45.17 3.93
445 580 3.573491 GATTTTAGCGCGCGGCCT 61.573 61.111 33.06 22.89 45.17 5.19
446 581 4.607606 GGATTTTAGCGCGCGGCC 62.608 66.667 33.06 16.24 45.17 6.13
447 582 4.938080 CGGATTTTAGCGCGCGGC 62.938 66.667 33.06 23.14 44.05 6.53
448 583 4.293626 CCGGATTTTAGCGCGCGG 62.294 66.667 33.06 14.53 0.00 6.46
449 584 4.293626 CCCGGATTTTAGCGCGCG 62.294 66.667 28.44 28.44 0.00 6.86
450 585 2.261172 AAACCCGGATTTTAGCGCGC 62.261 55.000 26.66 26.66 0.00 6.86
451 586 0.169451 AAAACCCGGATTTTAGCGCG 59.831 50.000 4.16 0.00 29.93 6.86
452 587 2.357327 AAAAACCCGGATTTTAGCGC 57.643 45.000 7.04 0.00 31.50 5.92
468 603 2.494530 GCTGTCCGGCACCCAAAAA 61.495 57.895 0.00 0.00 0.00 1.94
469 604 2.909965 GCTGTCCGGCACCCAAAA 60.910 61.111 0.00 0.00 0.00 2.44
470 605 3.842925 GAGCTGTCCGGCACCCAAA 62.843 63.158 0.00 0.00 34.17 3.28
471 606 4.329545 GAGCTGTCCGGCACCCAA 62.330 66.667 0.00 0.00 34.17 4.12
479 614 2.416850 AGCTTTTGTTGGAGCTGTCCG 61.417 52.381 0.00 0.00 46.82 4.79
480 615 1.322442 AGCTTTTGTTGGAGCTGTCC 58.678 50.000 0.00 0.00 46.82 4.02
485 620 4.429108 TGTTTTACAGCTTTTGTTGGAGC 58.571 39.130 0.00 0.00 41.29 4.70
499 634 2.246977 CGCGCGCACTGTTTTACA 59.753 55.556 32.61 0.00 0.00 2.41
500 635 3.156879 GCGCGCGCACTGTTTTAC 61.157 61.111 46.11 15.61 41.49 2.01
519 654 1.358759 CGCACGCCCAACTCTTTTT 59.641 52.632 0.00 0.00 0.00 1.94
520 655 3.030652 CGCACGCCCAACTCTTTT 58.969 55.556 0.00 0.00 0.00 2.27
521 656 3.660111 GCGCACGCCCAACTCTTT 61.660 61.111 0.30 0.00 34.56 2.52
522 657 4.626081 AGCGCACGCCCAACTCTT 62.626 61.111 11.47 0.00 43.17 2.85
525 660 4.927782 TTCAGCGCACGCCCAACT 62.928 61.111 11.47 0.00 43.17 3.16
526 661 2.945398 TTTTTCAGCGCACGCCCAAC 62.945 55.000 11.47 0.00 43.17 3.77
527 662 2.775856 TTTTTCAGCGCACGCCCAA 61.776 52.632 11.47 1.59 43.17 4.12
528 663 3.212682 TTTTTCAGCGCACGCCCA 61.213 55.556 11.47 0.00 43.17 5.36
529 664 2.729491 GTTTTTCAGCGCACGCCC 60.729 61.111 11.47 0.00 43.17 6.13
530 665 3.091022 CGTTTTTCAGCGCACGCC 61.091 61.111 11.47 0.00 43.17 5.68
531 666 0.655048 TAACGTTTTTCAGCGCACGC 60.655 50.000 11.47 6.99 42.33 5.34
532 667 1.896193 GATAACGTTTTTCAGCGCACG 59.104 47.619 11.47 12.58 38.62 5.34
533 668 2.911120 TGATAACGTTTTTCAGCGCAC 58.089 42.857 11.47 0.00 0.00 5.34
534 669 3.610786 TTGATAACGTTTTTCAGCGCA 57.389 38.095 11.47 0.00 0.00 6.09
535 670 4.660661 GCTTTTGATAACGTTTTTCAGCGC 60.661 41.667 5.91 0.00 0.00 5.92
536 671 4.675114 AGCTTTTGATAACGTTTTTCAGCG 59.325 37.500 5.91 4.43 0.00 5.18
537 672 5.610338 GCAGCTTTTGATAACGTTTTTCAGC 60.610 40.000 5.91 10.20 0.00 4.26
538 673 5.458452 TGCAGCTTTTGATAACGTTTTTCAG 59.542 36.000 5.91 0.69 0.00 3.02
539 674 5.344066 TGCAGCTTTTGATAACGTTTTTCA 58.656 33.333 5.91 7.85 0.00 2.69
540 675 5.881637 TGCAGCTTTTGATAACGTTTTTC 57.118 34.783 5.91 4.99 0.00 2.29
541 676 6.654793 TTTGCAGCTTTTGATAACGTTTTT 57.345 29.167 5.91 0.00 0.00 1.94
542 677 6.843069 ATTTGCAGCTTTTGATAACGTTTT 57.157 29.167 5.91 0.00 0.00 2.43
543 678 6.843069 AATTTGCAGCTTTTGATAACGTTT 57.157 29.167 5.91 0.00 0.00 3.60
544 679 6.478344 TCAAATTTGCAGCTTTTGATAACGTT 59.522 30.769 13.54 5.88 35.16 3.99
545 680 5.982516 TCAAATTTGCAGCTTTTGATAACGT 59.017 32.000 13.54 0.00 35.16 3.99
546 681 6.400303 CCTCAAATTTGCAGCTTTTGATAACG 60.400 38.462 13.54 8.54 38.34 3.18
547 682 6.619232 GCCTCAAATTTGCAGCTTTTGATAAC 60.619 38.462 19.21 8.88 38.34 1.89
548 683 5.409214 GCCTCAAATTTGCAGCTTTTGATAA 59.591 36.000 19.21 0.00 38.34 1.75
549 684 4.931002 GCCTCAAATTTGCAGCTTTTGATA 59.069 37.500 19.21 0.00 38.34 2.15
550 685 3.749609 GCCTCAAATTTGCAGCTTTTGAT 59.250 39.130 19.21 0.00 38.34 2.57
551 686 3.132925 GCCTCAAATTTGCAGCTTTTGA 58.867 40.909 19.21 15.56 37.11 2.69
552 687 2.096614 CGCCTCAAATTTGCAGCTTTTG 60.097 45.455 22.03 10.25 0.00 2.44
553 688 2.137523 CGCCTCAAATTTGCAGCTTTT 58.862 42.857 22.03 0.00 0.00 2.27
554 689 1.787012 CGCCTCAAATTTGCAGCTTT 58.213 45.000 22.03 0.00 0.00 3.51
555 690 0.668401 GCGCCTCAAATTTGCAGCTT 60.668 50.000 22.03 0.00 0.00 3.74
556 691 1.080298 GCGCCTCAAATTTGCAGCT 60.080 52.632 22.03 0.00 0.00 4.24
557 692 2.096442 GGCGCCTCAAATTTGCAGC 61.096 57.895 22.15 15.89 0.00 5.25
558 693 1.802715 CGGCGCCTCAAATTTGCAG 60.803 57.895 26.68 11.07 0.00 4.41
559 694 2.257980 CGGCGCCTCAAATTTGCA 59.742 55.556 26.68 2.12 0.00 4.08
560 695 2.283472 ATCCGGCGCCTCAAATTTGC 62.283 55.000 26.68 1.00 0.00 3.68
561 696 0.173255 AATCCGGCGCCTCAAATTTG 59.827 50.000 26.68 12.15 0.00 2.32
562 697 0.173255 CAATCCGGCGCCTCAAATTT 59.827 50.000 26.68 6.48 0.00 1.82
563 698 1.809207 CAATCCGGCGCCTCAAATT 59.191 52.632 26.68 14.93 0.00 1.82
564 699 2.774799 GCAATCCGGCGCCTCAAAT 61.775 57.895 26.68 9.38 0.00 2.32
565 700 3.439540 GCAATCCGGCGCCTCAAA 61.440 61.111 26.68 7.16 0.00 2.69
576 711 4.179579 GTGAAGCGCCCGCAATCC 62.180 66.667 15.50 1.61 44.88 3.01
577 712 2.270297 ATTGTGAAGCGCCCGCAATC 62.270 55.000 24.47 12.51 39.66 2.67
578 713 1.876497 AATTGTGAAGCGCCCGCAAT 61.876 50.000 24.47 24.47 43.93 3.56
579 714 2.081425 AAATTGTGAAGCGCCCGCAA 62.081 50.000 22.68 22.68 44.88 4.85
580 715 1.237954 TAAATTGTGAAGCGCCCGCA 61.238 50.000 15.50 6.67 44.88 5.69
581 716 0.796870 GTAAATTGTGAAGCGCCCGC 60.797 55.000 2.29 4.20 42.33 6.13
582 717 0.519519 TGTAAATTGTGAAGCGCCCG 59.480 50.000 2.29 0.00 0.00 6.13
583 718 1.539827 AGTGTAAATTGTGAAGCGCCC 59.460 47.619 2.29 0.00 0.00 6.13
584 719 2.584791 CAGTGTAAATTGTGAAGCGCC 58.415 47.619 2.29 0.00 0.00 6.53
585 720 1.978782 GCAGTGTAAATTGTGAAGCGC 59.021 47.619 0.00 0.00 0.00 5.92
586 721 2.233355 CGCAGTGTAAATTGTGAAGCG 58.767 47.619 0.00 0.00 36.62 4.68
587 722 3.268013 ACGCAGTGTAAATTGTGAAGC 57.732 42.857 0.00 0.00 42.51 3.86
602 737 1.370414 CGCCCAAAAGAACACGCAG 60.370 57.895 0.00 0.00 0.00 5.18
603 738 2.718731 CGCCCAAAAGAACACGCA 59.281 55.556 0.00 0.00 0.00 5.24
604 739 2.729491 GCGCCCAAAAGAACACGC 60.729 61.111 0.00 0.00 39.49 5.34
605 740 2.426752 CGCGCCCAAAAGAACACG 60.427 61.111 0.00 0.00 0.00 4.49
606 741 2.729491 GCGCGCCCAAAAGAACAC 60.729 61.111 23.24 0.00 0.00 3.32
607 742 2.081425 AATGCGCGCCCAAAAGAACA 62.081 50.000 30.77 5.62 0.00 3.18
608 743 0.943835 AAATGCGCGCCCAAAAGAAC 60.944 50.000 30.77 0.00 0.00 3.01
609 744 0.249657 AAAATGCGCGCCCAAAAGAA 60.250 45.000 30.77 7.41 0.00 2.52
610 745 0.249657 AAAAATGCGCGCCCAAAAGA 60.250 45.000 30.77 8.32 0.00 2.52
611 746 0.110733 CAAAAATGCGCGCCCAAAAG 60.111 50.000 30.77 11.05 0.00 2.27
612 747 1.502163 CCAAAAATGCGCGCCCAAAA 61.502 50.000 30.77 10.13 0.00 2.44
613 748 1.958205 CCAAAAATGCGCGCCCAAA 60.958 52.632 30.77 10.60 0.00 3.28
614 749 2.356793 CCAAAAATGCGCGCCCAA 60.357 55.556 30.77 11.06 0.00 4.12
615 750 4.370066 CCCAAAAATGCGCGCCCA 62.370 61.111 30.77 11.98 0.00 5.36
618 753 2.801624 GATGCCCAAAAATGCGCGC 61.802 57.895 27.26 27.26 0.00 6.86
619 754 1.153784 AGATGCCCAAAAATGCGCG 60.154 52.632 0.00 0.00 0.00 6.86
620 755 1.698714 GCAGATGCCCAAAAATGCGC 61.699 55.000 0.00 0.00 34.31 6.09
621 756 0.108520 AGCAGATGCCCAAAAATGCG 60.109 50.000 0.14 0.00 43.38 4.73
622 757 2.965572 TAGCAGATGCCCAAAAATGC 57.034 45.000 0.14 0.00 43.38 3.56
623 758 3.619929 GCTTTAGCAGATGCCCAAAAATG 59.380 43.478 0.14 0.00 43.38 2.32
624 759 3.865446 GCTTTAGCAGATGCCCAAAAAT 58.135 40.909 0.14 0.00 43.38 1.82
625 760 3.317603 GCTTTAGCAGATGCCCAAAAA 57.682 42.857 0.14 0.00 43.38 1.94
638 773 0.110373 CGACCCAACGTTGCTTTAGC 60.110 55.000 22.93 7.16 42.50 3.09
639 774 0.515564 CCGACCCAACGTTGCTTTAG 59.484 55.000 22.93 8.57 0.00 1.85
640 775 1.508808 GCCGACCCAACGTTGCTTTA 61.509 55.000 22.93 0.00 0.00 1.85
641 776 2.841160 GCCGACCCAACGTTGCTTT 61.841 57.895 22.93 8.45 0.00 3.51
642 777 3.284449 GCCGACCCAACGTTGCTT 61.284 61.111 22.93 11.09 0.00 3.91
643 778 4.555709 TGCCGACCCAACGTTGCT 62.556 61.111 22.93 9.56 0.00 3.91
644 779 4.322385 GTGCCGACCCAACGTTGC 62.322 66.667 22.93 10.83 0.00 4.17
645 780 2.897846 TGTGCCGACCCAACGTTG 60.898 61.111 21.47 21.47 0.00 4.10
646 781 2.030490 TAGTGTGCCGACCCAACGTT 62.030 55.000 0.00 0.00 0.00 3.99
647 782 2.030490 TTAGTGTGCCGACCCAACGT 62.030 55.000 0.00 0.00 0.00 3.99
648 783 0.881159 TTTAGTGTGCCGACCCAACG 60.881 55.000 0.00 0.00 0.00 4.10
649 784 1.265905 CTTTTAGTGTGCCGACCCAAC 59.734 52.381 0.00 0.00 0.00 3.77
650 785 1.134037 ACTTTTAGTGTGCCGACCCAA 60.134 47.619 0.00 0.00 0.00 4.12
651 786 0.470766 ACTTTTAGTGTGCCGACCCA 59.529 50.000 0.00 0.00 0.00 4.51
652 787 0.872388 CACTTTTAGTGTGCCGACCC 59.128 55.000 0.00 0.00 41.19 4.46
662 797 2.413837 CGCCACTGTAGCACTTTTAGT 58.586 47.619 0.00 0.00 0.00 2.24
663 798 1.128692 GCGCCACTGTAGCACTTTTAG 59.871 52.381 0.00 0.00 0.00 1.85
664 799 1.153353 GCGCCACTGTAGCACTTTTA 58.847 50.000 0.00 0.00 0.00 1.52
665 800 1.841663 CGCGCCACTGTAGCACTTTT 61.842 55.000 0.00 0.00 0.00 2.27
666 801 2.317609 CGCGCCACTGTAGCACTTT 61.318 57.895 0.00 0.00 0.00 2.66
667 802 2.738521 CGCGCCACTGTAGCACTT 60.739 61.111 0.00 0.00 0.00 3.16
669 804 3.982372 TAGCGCGCCACTGTAGCAC 62.982 63.158 30.33 0.00 0.00 4.40
670 805 2.773397 TTTAGCGCGCCACTGTAGCA 62.773 55.000 30.33 0.71 0.00 3.49
671 806 1.632046 TTTTAGCGCGCCACTGTAGC 61.632 55.000 30.33 0.00 0.00 3.58
672 807 0.094730 GTTTTAGCGCGCCACTGTAG 59.905 55.000 30.33 0.00 0.00 2.74
673 808 0.320073 AGTTTTAGCGCGCCACTGTA 60.320 50.000 30.33 10.64 0.00 2.74
674 809 0.320073 TAGTTTTAGCGCGCCACTGT 60.320 50.000 30.33 11.88 0.00 3.55
675 810 1.006832 ATAGTTTTAGCGCGCCACTG 58.993 50.000 30.33 0.00 0.00 3.66
676 811 1.734163 AATAGTTTTAGCGCGCCACT 58.266 45.000 30.33 25.00 0.00 4.00
677 812 2.537639 AAATAGTTTTAGCGCGCCAC 57.462 45.000 30.33 19.26 0.00 5.01
678 813 3.064271 CCTAAAATAGTTTTAGCGCGCCA 59.936 43.478 30.33 12.88 46.75 5.69
679 814 3.547413 CCCTAAAATAGTTTTAGCGCGCC 60.547 47.826 30.33 12.43 46.75 6.53
680 815 3.614588 CCCTAAAATAGTTTTAGCGCGC 58.385 45.455 26.66 26.66 46.75 6.86
681 816 3.614588 GCCCTAAAATAGTTTTAGCGCG 58.385 45.455 0.00 0.00 46.75 6.86
682 817 3.614588 CGCCCTAAAATAGTTTTAGCGC 58.385 45.455 16.23 16.23 46.75 5.92
683 818 3.614588 GCGCCCTAAAATAGTTTTAGCG 58.385 45.455 16.92 16.92 46.75 4.26
684 819 3.310501 TCGCGCCCTAAAATAGTTTTAGC 59.689 43.478 0.00 6.54 46.75 3.09
686 821 5.876612 TTTCGCGCCCTAAAATAGTTTTA 57.123 34.783 0.00 0.00 34.19 1.52
687 822 4.769859 TTTCGCGCCCTAAAATAGTTTT 57.230 36.364 0.00 0.00 36.67 2.43
688 823 4.976224 ATTTCGCGCCCTAAAATAGTTT 57.024 36.364 0.00 0.00 0.00 2.66
689 824 4.976224 AATTTCGCGCCCTAAAATAGTT 57.024 36.364 0.00 0.00 0.00 2.24
690 825 4.976224 AAATTTCGCGCCCTAAAATAGT 57.024 36.364 0.00 0.00 0.00 2.12
691 826 7.566868 GCATAAAAATTTCGCGCCCTAAAATAG 60.567 37.037 0.00 0.00 0.00 1.73
692 827 6.199342 GCATAAAAATTTCGCGCCCTAAAATA 59.801 34.615 0.00 0.00 0.00 1.40
693 828 5.006261 GCATAAAAATTTCGCGCCCTAAAAT 59.994 36.000 0.00 0.00 0.00 1.82
694 829 4.327627 GCATAAAAATTTCGCGCCCTAAAA 59.672 37.500 0.00 0.00 0.00 1.52
695 830 3.860536 GCATAAAAATTTCGCGCCCTAAA 59.139 39.130 0.00 0.06 0.00 1.85
696 831 3.119459 TGCATAAAAATTTCGCGCCCTAA 60.119 39.130 0.00 0.00 0.00 2.69
697 832 2.423892 TGCATAAAAATTTCGCGCCCTA 59.576 40.909 0.00 0.00 0.00 3.53
698 833 1.203523 TGCATAAAAATTTCGCGCCCT 59.796 42.857 0.00 0.00 0.00 5.19
699 834 1.323235 GTGCATAAAAATTTCGCGCCC 59.677 47.619 0.00 0.00 0.00 6.13
700 835 1.323235 GGTGCATAAAAATTTCGCGCC 59.677 47.619 0.00 14.67 40.10 6.53
701 836 1.323235 GGGTGCATAAAAATTTCGCGC 59.677 47.619 0.00 0.00 0.00 6.86
702 837 1.581602 CGGGTGCATAAAAATTTCGCG 59.418 47.619 0.00 0.00 0.00 5.87
703 838 2.601804 ACGGGTGCATAAAAATTTCGC 58.398 42.857 0.00 0.00 0.00 4.70
704 839 3.366422 CCAACGGGTGCATAAAAATTTCG 59.634 43.478 0.00 0.00 0.00 3.46
705 840 4.561105 TCCAACGGGTGCATAAAAATTTC 58.439 39.130 0.00 0.00 34.93 2.17
706 841 4.282195 TCTCCAACGGGTGCATAAAAATTT 59.718 37.500 0.00 0.00 34.93 1.82
707 842 3.829601 TCTCCAACGGGTGCATAAAAATT 59.170 39.130 0.00 0.00 34.93 1.82
708 843 3.426615 TCTCCAACGGGTGCATAAAAAT 58.573 40.909 0.00 0.00 34.93 1.82
709 844 2.865079 TCTCCAACGGGTGCATAAAAA 58.135 42.857 0.00 0.00 34.93 1.94
710 845 2.570415 TCTCCAACGGGTGCATAAAA 57.430 45.000 0.00 0.00 34.93 1.52
711 846 2.364632 CATCTCCAACGGGTGCATAAA 58.635 47.619 0.00 0.00 34.93 1.40
712 847 2.016604 GCATCTCCAACGGGTGCATAA 61.017 52.381 0.00 0.00 35.93 1.90
713 848 0.463654 GCATCTCCAACGGGTGCATA 60.464 55.000 0.00 0.00 35.93 3.14
714 849 1.750399 GCATCTCCAACGGGTGCAT 60.750 57.895 0.00 0.00 35.93 3.96
715 850 2.359850 GCATCTCCAACGGGTGCA 60.360 61.111 0.00 0.00 35.93 4.57
716 851 2.045926 AGCATCTCCAACGGGTGC 60.046 61.111 0.00 0.00 36.11 5.01
717 852 4.208632 GAGCATCTCCAACGGGTG 57.791 61.111 0.00 0.00 34.93 4.61
733 868 8.832521 CGCCACAAAATTATATACACCTTTAGA 58.167 33.333 0.00 0.00 0.00 2.10
734 869 8.617809 ACGCCACAAAATTATATACACCTTTAG 58.382 33.333 0.00 0.00 0.00 1.85
759 894 1.541588 CTAGCTTTTCCAACTGGCCAC 59.458 52.381 0.00 0.00 34.44 5.01
834 969 0.523072 CTTTCATGTGCGTCCCCAAG 59.477 55.000 0.00 0.00 0.00 3.61
835 970 1.523154 GCTTTCATGTGCGTCCCCAA 61.523 55.000 0.00 0.00 0.00 4.12
836 971 1.971167 GCTTTCATGTGCGTCCCCA 60.971 57.895 0.00 0.00 0.00 4.96
850 985 4.021719 AGCTAAGACAACATGCATTGCTTT 60.022 37.500 10.49 0.00 32.20 3.51
865 1000 0.670546 TGCTTGGTCGCAGCTAAGAC 60.671 55.000 11.14 11.14 38.19 3.01
881 1016 3.254903 TGTGTGTAGAGATGTACGTTGCT 59.745 43.478 0.00 0.00 0.00 3.91
890 1025 3.677121 GTGCTTGAGTGTGTGTAGAGATG 59.323 47.826 0.00 0.00 0.00 2.90
973 1108 8.713206 GGTTGGACCATATACGCAGTACCTATA 61.713 44.444 0.00 0.00 41.91 1.31
991 1126 1.739067 CTTCGATCCTTGGTTGGACC 58.261 55.000 0.00 0.00 39.17 4.46
1031 1167 3.827876 TCGGAGTAGTCCATTACACACAA 59.172 43.478 16.94 0.00 44.18 3.33
1035 1171 4.922719 CTCTTCGGAGTAGTCCATTACAC 58.077 47.826 16.94 0.00 44.18 2.90
1226 1362 3.433615 GCGTTGCAGTAGAAGAAGACATT 59.566 43.478 0.00 0.00 0.00 2.71
1235 1371 3.109547 CGCGGCGTTGCAGTAGAA 61.110 61.111 15.36 0.00 34.15 2.10
1267 1403 3.428045 GCAGGACCATTACAATGACAAGC 60.428 47.826 3.48 2.79 38.70 4.01
1428 1564 1.887242 GCCATCAGCACGGCGAATA 60.887 57.895 16.62 0.00 42.97 1.75
1429 1565 3.204827 GCCATCAGCACGGCGAAT 61.205 61.111 16.62 0.00 42.97 3.34
1501 1637 3.064987 CTCCGCGTCCGAATGTCCT 62.065 63.158 4.92 0.00 36.29 3.85
1504 1640 3.064987 CTCCTCCGCGTCCGAATGT 62.065 63.158 4.92 0.00 36.29 2.71
1630 1766 1.216178 CTGCCCCCGAAAATTGCTG 59.784 57.895 0.00 0.00 0.00 4.41
1631 1767 1.984026 CCTGCCCCCGAAAATTGCT 60.984 57.895 0.00 0.00 0.00 3.91
1689 1825 6.727824 TGCATAACAAGAAGAAGAAGTAGC 57.272 37.500 0.00 0.00 0.00 3.58
1705 1841 0.511221 AGCACGTCGTGTTGCATAAC 59.489 50.000 25.18 7.19 35.75 1.89
1779 1915 4.183686 CGTACGACCGGGCGACAT 62.184 66.667 41.17 18.34 34.83 3.06
1814 1950 1.078143 GGCAGAGAAGTTCCGCCAT 60.078 57.895 18.85 0.00 46.76 4.40
1904 2040 1.003116 GGCAATGATCACGAGCATCAC 60.003 52.381 15.20 0.00 36.27 3.06
1930 2066 5.501156 ACTGTGTCCATAGAGAATTTTCCC 58.499 41.667 0.00 0.00 0.00 3.97
1950 2086 1.068055 GTGCCAGCCATTTCTTGACTG 60.068 52.381 0.00 0.00 0.00 3.51
2012 2148 4.489249 GCAAGGTGCATGCATGTC 57.511 55.556 25.64 18.98 44.26 3.06
2078 2214 2.604914 ACTCATATGTCAAAAGCGAGCG 59.395 45.455 1.90 0.00 0.00 5.03
2593 2732 3.474570 GCCTCCACCCAGAGCGAT 61.475 66.667 0.00 0.00 32.17 4.58
2614 2753 6.522054 CAACTTCTTTAGACCCTTGTAGACA 58.478 40.000 0.00 0.00 0.00 3.41
2690 2838 2.434428 CTTCTTCTTGAGGCTGTGCAT 58.566 47.619 0.00 0.00 0.00 3.96
2842 2993 0.609957 TTCTCGGGTCGTAGCCAAGA 60.610 55.000 4.42 0.00 34.89 3.02
2908 3059 1.363080 GAGGAGGATAACGGCGACC 59.637 63.158 16.62 11.35 0.00 4.79
2953 3104 3.458189 GAGCACATTACTCCGTATGCTT 58.542 45.455 0.00 0.00 43.20 3.91
2968 3119 3.633609 GATGCAGGCCTGGAGCACA 62.634 63.158 34.27 22.92 46.50 4.57
3083 3234 1.377333 GCAGGGCAAGGTAGGTGAC 60.377 63.158 0.00 0.00 0.00 3.67
3104 3255 1.519408 GCAAACAGGAGCGGTAGAAA 58.481 50.000 0.00 0.00 0.00 2.52
3346 3497 1.801309 CGGCAATGTGGAAACCCGTT 61.801 55.000 0.00 0.00 0.00 4.44
3598 3749 2.964925 GCAACGAGCGTGGTCACA 60.965 61.111 0.00 0.00 0.00 3.58
3697 3854 1.279271 ACTGGGTGAAGGGAAGAATCG 59.721 52.381 0.00 0.00 0.00 3.34
3708 3865 0.469705 AATGCTGCCAACTGGGTGAA 60.470 50.000 0.00 0.00 39.65 3.18
3733 3890 6.430000 GGGAAAGAATAACAAGCTACAACTCA 59.570 38.462 0.00 0.00 0.00 3.41
3752 3909 5.299279 ACACACTCATACAAGTTTGGGAAAG 59.701 40.000 0.00 0.00 32.44 2.62
3756 3913 6.817765 AATACACACTCATACAAGTTTGGG 57.182 37.500 0.00 0.00 32.44 4.12
3780 3937 4.917385 ACCACAAAAGGCACAGTATATCA 58.083 39.130 0.00 0.00 0.00 2.15
3782 3939 4.873827 CGTACCACAAAAGGCACAGTATAT 59.126 41.667 0.00 0.00 0.00 0.86
3783 3940 4.247258 CGTACCACAAAAGGCACAGTATA 58.753 43.478 0.00 0.00 0.00 1.47
3784 3941 3.071479 CGTACCACAAAAGGCACAGTAT 58.929 45.455 0.00 0.00 0.00 2.12
3785 3942 2.485903 CGTACCACAAAAGGCACAGTA 58.514 47.619 0.00 0.00 0.00 2.74
3786 3943 1.305201 CGTACCACAAAAGGCACAGT 58.695 50.000 0.00 0.00 0.00 3.55
3787 3944 0.591170 CCGTACCACAAAAGGCACAG 59.409 55.000 0.00 0.00 0.00 3.66
3791 3948 1.802365 CTGTACCGTACCACAAAAGGC 59.198 52.381 6.23 0.00 0.00 4.35
3796 3953 3.119884 CGACATACTGTACCGTACCACAA 60.120 47.826 6.23 0.00 0.00 3.33
3803 3960 1.171308 ACAGCGACATACTGTACCGT 58.829 50.000 0.00 0.00 46.32 4.83
3810 3967 2.864343 GCGGAATTTACAGCGACATACT 59.136 45.455 0.00 0.00 0.00 2.12
3811 3968 2.864343 AGCGGAATTTACAGCGACATAC 59.136 45.455 0.00 0.00 36.22 2.39
3812 3969 3.120792 GAGCGGAATTTACAGCGACATA 58.879 45.455 0.00 0.00 36.22 2.29
3813 3970 1.933853 GAGCGGAATTTACAGCGACAT 59.066 47.619 0.00 0.00 36.22 3.06
3814 3971 1.355971 GAGCGGAATTTACAGCGACA 58.644 50.000 0.00 0.00 36.22 4.35
3815 3972 0.297820 CGAGCGGAATTTACAGCGAC 59.702 55.000 0.00 0.00 36.22 5.19
3816 3973 0.171679 TCGAGCGGAATTTACAGCGA 59.828 50.000 0.00 0.00 36.22 4.93
3817 3974 1.071239 CATCGAGCGGAATTTACAGCG 60.071 52.381 0.00 0.00 36.22 5.18
3818 3975 1.933853 ACATCGAGCGGAATTTACAGC 59.066 47.619 0.00 0.00 0.00 4.40
3819 3976 2.285220 CCACATCGAGCGGAATTTACAG 59.715 50.000 0.00 0.00 0.00 2.74
3820 3977 2.276201 CCACATCGAGCGGAATTTACA 58.724 47.619 0.00 0.00 0.00 2.41
3821 3978 1.003866 GCCACATCGAGCGGAATTTAC 60.004 52.381 1.91 0.00 0.00 2.01
3822 3979 1.134521 AGCCACATCGAGCGGAATTTA 60.135 47.619 1.91 0.00 0.00 1.40
3834 3991 4.507710 TCACATGACTAGAAAGCCACATC 58.492 43.478 0.00 0.00 0.00 3.06
3862 4019 8.971032 AGAGGAAAATAGGAGATCACATATCT 57.029 34.615 0.00 0.00 0.00 1.98
3863 4020 9.434420 CAAGAGGAAAATAGGAGATCACATATC 57.566 37.037 0.00 0.00 0.00 1.63
3864 4021 7.882271 GCAAGAGGAAAATAGGAGATCACATAT 59.118 37.037 0.00 0.00 0.00 1.78
3865 4022 7.220030 GCAAGAGGAAAATAGGAGATCACATA 58.780 38.462 0.00 0.00 0.00 2.29
3875 4032 4.261801 TCTTTCGGCAAGAGGAAAATAGG 58.738 43.478 0.00 0.00 36.51 2.57
3890 4047 1.069227 CGGAACAAAAGCCTCTTTCGG 60.069 52.381 0.00 0.00 0.00 4.30
3891 4048 1.602377 ACGGAACAAAAGCCTCTTTCG 59.398 47.619 0.00 0.00 0.00 3.46
3892 4049 3.710326 AACGGAACAAAAGCCTCTTTC 57.290 42.857 0.00 0.00 0.00 2.62
3896 4053 6.838198 AAAATAAAACGGAACAAAAGCCTC 57.162 33.333 0.00 0.00 0.00 4.70
3897 4054 9.634163 CTATAAAATAAAACGGAACAAAAGCCT 57.366 29.630 0.00 0.00 0.00 4.58
3930 4087 2.697431 TGTTTGGTCGTGCTTTATGC 57.303 45.000 0.00 0.00 43.25 3.14
3931 4088 7.693952 ACTTATATGTTTGGTCGTGCTTTATG 58.306 34.615 0.00 0.00 0.00 1.90
3932 4089 7.859325 ACTTATATGTTTGGTCGTGCTTTAT 57.141 32.000 0.00 0.00 0.00 1.40
3933 4090 7.388224 TCAACTTATATGTTTGGTCGTGCTTTA 59.612 33.333 1.40 0.00 0.00 1.85
3936 4093 5.121768 GTCAACTTATATGTTTGGTCGTGCT 59.878 40.000 1.40 0.00 0.00 4.40
3937 4094 5.321516 GTCAACTTATATGTTTGGTCGTGC 58.678 41.667 1.40 0.00 0.00 5.34
3938 4095 5.547341 CGTCAACTTATATGTTTGGTCGTG 58.453 41.667 1.40 0.00 0.00 4.35
3939 4096 4.092383 GCGTCAACTTATATGTTTGGTCGT 59.908 41.667 1.40 0.00 0.00 4.34
3940 4097 4.092237 TGCGTCAACTTATATGTTTGGTCG 59.908 41.667 1.40 3.62 0.00 4.79
3941 4098 5.321516 GTGCGTCAACTTATATGTTTGGTC 58.678 41.667 1.40 0.00 0.00 4.02
3942 4099 4.142988 CGTGCGTCAACTTATATGTTTGGT 60.143 41.667 1.40 0.00 0.00 3.67
3943 4100 4.331137 CGTGCGTCAACTTATATGTTTGG 58.669 43.478 1.40 0.00 0.00 3.28
3944 4101 3.778718 GCGTGCGTCAACTTATATGTTTG 59.221 43.478 1.40 0.00 0.00 2.93
3945 4102 3.682858 AGCGTGCGTCAACTTATATGTTT 59.317 39.130 1.40 0.00 0.00 2.83
3955 4112 0.856641 TTTCTGTAGCGTGCGTCAAC 59.143 50.000 0.00 0.00 0.00 3.18
3956 4113 1.573026 TTTTCTGTAGCGTGCGTCAA 58.427 45.000 0.00 0.00 0.00 3.18
3999 4159 8.357402 GTTGGTCTTTGACACCTATGTATTTTT 58.643 33.333 0.07 0.00 39.95 1.94
4002 4162 6.539173 TGTTGGTCTTTGACACCTATGTATT 58.461 36.000 0.07 0.00 39.95 1.89
4012 4172 2.441410 TGTTGCTGTTGGTCTTTGACA 58.559 42.857 0.07 0.00 33.68 3.58
4013 4173 3.179048 GTTGTTGCTGTTGGTCTTTGAC 58.821 45.455 0.00 0.00 0.00 3.18
4014 4174 2.822561 TGTTGTTGCTGTTGGTCTTTGA 59.177 40.909 0.00 0.00 0.00 2.69
4019 4179 1.470805 GGGTTGTTGTTGCTGTTGGTC 60.471 52.381 0.00 0.00 0.00 4.02
4022 4182 2.376808 TTGGGTTGTTGTTGCTGTTG 57.623 45.000 0.00 0.00 0.00 3.33
4027 4187 1.135228 AGTCGTTTGGGTTGTTGTTGC 60.135 47.619 0.00 0.00 0.00 4.17
4031 4191 3.119637 ACTTCAAGTCGTTTGGGTTGTTG 60.120 43.478 0.00 0.00 37.39 3.33
4033 4193 2.718563 ACTTCAAGTCGTTTGGGTTGT 58.281 42.857 0.00 0.00 37.39 3.32
4036 4196 3.387050 AGTCTACTTCAAGTCGTTTGGGT 59.613 43.478 0.00 5.45 37.39 4.51
4043 4203 6.030849 CCATTCTGTAGTCTACTTCAAGTCG 58.969 44.000 11.28 0.00 0.00 4.18
4048 4208 4.772624 AGTGCCATTCTGTAGTCTACTTCA 59.227 41.667 11.28 0.00 0.00 3.02
4053 4213 4.709886 TGCTTAGTGCCATTCTGTAGTCTA 59.290 41.667 0.00 0.00 42.00 2.59
4058 4218 2.304470 TGGTGCTTAGTGCCATTCTGTA 59.696 45.455 0.00 0.00 42.00 2.74
4067 4227 2.622436 CTCCTTAGTGGTGCTTAGTGC 58.378 52.381 0.00 0.00 37.03 4.40
4077 4237 2.005960 CTCCGACGGCTCCTTAGTGG 62.006 65.000 9.66 0.00 37.10 4.00
4092 4252 0.250295 TTTCACTGTGAAGGGCTCCG 60.250 55.000 21.13 0.00 37.70 4.63
4116 4276 1.438651 TGAAAATCGCCTCTTCACGG 58.561 50.000 0.00 0.00 0.00 4.94
4119 4279 4.133820 TGACTTTGAAAATCGCCTCTTCA 58.866 39.130 0.00 0.00 0.00 3.02
4127 4287 3.902465 CGCTTCACTGACTTTGAAAATCG 59.098 43.478 0.00 0.00 32.61 3.34
4147 4307 0.716108 CACCGTCTTGAAGATCACGC 59.284 55.000 0.00 0.00 0.00 5.34
4148 4308 1.986378 GACACCGTCTTGAAGATCACG 59.014 52.381 0.00 0.00 0.00 4.35
4149 4309 3.305398 AGACACCGTCTTGAAGATCAC 57.695 47.619 0.00 0.00 40.28 3.06
4171 4331 2.227388 GCTCTGGTGTCATGTCCTTTTG 59.773 50.000 0.00 0.00 0.00 2.44
4211 4372 6.099557 TGTTTGGGGTGAAAATCTTGATCTTT 59.900 34.615 0.00 0.00 0.00 2.52
4212 4373 5.602145 TGTTTGGGGTGAAAATCTTGATCTT 59.398 36.000 0.00 0.00 0.00 2.40
4231 4392 4.301628 GCTCTTGTCCTTCCAAATGTTTG 58.698 43.478 0.00 0.00 37.90 2.93
4252 4413 3.292159 GTCCCCGTTGTGGTTGGC 61.292 66.667 0.00 0.00 35.15 4.52
4264 4425 2.810274 GTCGTCACCTTTTTAAGTCCCC 59.190 50.000 0.00 0.00 0.00 4.81
4266 4427 3.126073 ACGTCGTCACCTTTTTAAGTCC 58.874 45.455 0.00 0.00 0.00 3.85
4270 4431 2.865551 GTGGACGTCGTCACCTTTTTAA 59.134 45.455 25.64 0.00 33.68 1.52
4311 4472 2.620112 CGTGCCTGGCTTTGGTCAG 61.620 63.158 21.03 0.00 44.13 3.51
4331 4492 2.819608 GAGTATGCTTGCTGGGTGAAAA 59.180 45.455 0.00 0.00 0.00 2.29
4361 4522 1.677966 CCTAGCCGCGCCCTATAGA 60.678 63.158 0.00 0.00 0.00 1.98
4362 4523 2.885861 CCTAGCCGCGCCCTATAG 59.114 66.667 0.00 0.00 0.00 1.31
4372 4533 0.464373 ATGGTTCATGTGCCTAGCCG 60.464 55.000 9.11 0.00 0.00 5.52
4441 4602 2.130073 CTCGTGGTCTGAGTGTGCGA 62.130 60.000 0.00 0.00 0.00 5.10
4443 4604 0.596577 TACTCGTGGTCTGAGTGTGC 59.403 55.000 5.92 0.00 45.83 4.57
4502 4663 0.988832 TCGATGGCCTTTAGGGTGTT 59.011 50.000 3.32 0.00 37.43 3.32
4521 4682 3.149196 GCAATTCATCACCCGTATCCAT 58.851 45.455 0.00 0.00 0.00 3.41
4525 4686 4.689612 AGTAGCAATTCATCACCCGTAT 57.310 40.909 0.00 0.00 0.00 3.06
4532 4693 5.335113 GCAACTCACAAGTAGCAATTCATCA 60.335 40.000 0.00 0.00 33.48 3.07
4539 4700 1.948104 ACGCAACTCACAAGTAGCAA 58.052 45.000 0.00 0.00 33.48 3.91
4553 4714 1.823976 GGAAAAACCCCCAACGCAA 59.176 52.632 0.00 0.00 0.00 4.85
4563 4724 2.160205 CCTTCCTCTTCGGGAAAAACC 58.840 52.381 0.00 0.00 43.74 3.27
4564 4725 2.160205 CCCTTCCTCTTCGGGAAAAAC 58.840 52.381 0.00 0.00 43.74 2.43
4569 4730 0.042731 ATGTCCCTTCCTCTTCGGGA 59.957 55.000 0.00 0.00 44.52 5.14
4571 4732 0.462759 GCATGTCCCTTCCTCTTCGG 60.463 60.000 0.00 0.00 0.00 4.30
4572 4733 0.250234 TGCATGTCCCTTCCTCTTCG 59.750 55.000 0.00 0.00 0.00 3.79
4603 4764 8.915036 TGGTTCTCTACTGAGGAAAATACTATC 58.085 37.037 0.00 0.00 40.58 2.08
4613 4774 7.619698 TCAATAATCTTGGTTCTCTACTGAGGA 59.380 37.037 0.00 0.00 40.58 3.71
4617 4778 7.824289 TGGTTCAATAATCTTGGTTCTCTACTG 59.176 37.037 0.00 0.00 0.00 2.74
4637 4798 2.094182 GCGTGAATCTCCTACTGGTTCA 60.094 50.000 0.00 0.00 34.23 3.18
4670 4831 3.616219 TCTTTTGTGTGTAGGTGCTGTT 58.384 40.909 0.00 0.00 0.00 3.16
4673 4834 2.222027 GCTCTTTTGTGTGTAGGTGCT 58.778 47.619 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.