Multiple sequence alignment - TraesCS4D01G348700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G348700 chr4D 100.000 3695 0 0 1 3695 502112078 502108384 0.000000e+00 6824
1 TraesCS4D01G348700 chr4D 93.135 437 28 2 3258 3694 502730798 502730364 1.120000e-179 640
2 TraesCS4D01G348700 chr4D 93.119 436 25 3 3258 3693 486565783 486565353 5.210000e-178 634
3 TraesCS4D01G348700 chr4B 92.006 2852 115 45 486 3258 646225830 646223013 0.000000e+00 3899
4 TraesCS4D01G348700 chr4B 84.971 173 13 5 1769 1941 88932341 88932500 2.950000e-36 163
5 TraesCS4D01G348700 chr5A 95.930 1720 67 3 993 2709 685014287 685012568 0.000000e+00 2785
6 TraesCS4D01G348700 chr5A 82.788 825 47 32 217 984 685015128 685014342 0.000000e+00 649
7 TraesCS4D01G348700 chr5A 93.151 438 25 2 3258 3695 619775390 619774958 4.020000e-179 638
8 TraesCS4D01G348700 chr5A 86.713 572 33 23 2705 3258 685012506 685011960 2.460000e-166 595
9 TraesCS4D01G348700 chr5A 92.958 71 5 0 480 550 685018938 685018868 1.820000e-18 104
10 TraesCS4D01G348700 chr1D 80.696 1637 273 24 1045 2664 260328024 260329634 0.000000e+00 1232
11 TraesCS4D01G348700 chr1D 98.941 661 6 1 1167 1827 44837 45496 0.000000e+00 1181
12 TraesCS4D01G348700 chr1D 98.779 655 7 1 1859 2513 45493 46146 0.000000e+00 1164
13 TraesCS4D01G348700 chr1A 80.561 1641 274 28 1045 2667 340411203 340409590 0.000000e+00 1221
14 TraesCS4D01G348700 chr1B 80.317 1641 278 28 1045 2667 352880622 352879009 0.000000e+00 1199
15 TraesCS4D01G348700 chr5D 94.508 437 22 1 3259 3695 98665778 98665344 0.000000e+00 673
16 TraesCS4D01G348700 chr5D 94.077 439 20 4 3258 3693 505398413 505398848 0.000000e+00 662
17 TraesCS4D01G348700 chr5D 92.268 388 20 5 1277 1655 515835631 515835245 3.250000e-150 542
18 TraesCS4D01G348700 chr5D 87.907 215 25 1 2123 2336 515835009 515834795 6.130000e-63 252
19 TraesCS4D01G348700 chr5D 89.720 107 9 2 1962 2067 515835103 515834998 6.440000e-28 135
20 TraesCS4D01G348700 chr5D 95.238 84 3 1 1687 1770 515835249 515835167 8.330000e-27 132
21 TraesCS4D01G348700 chr3D 94.064 438 25 1 3258 3695 376916411 376916847 0.000000e+00 664
22 TraesCS4D01G348700 chr3D 92.744 441 28 2 3255 3695 580656355 580656791 5.210000e-178 634
23 TraesCS4D01G348700 chr7D 93.197 441 25 3 3258 3695 56936787 56937225 0.000000e+00 643
24 TraesCS4D01G348700 chr7D 88.991 436 39 5 1216 1642 520992326 520991891 7.030000e-147 531
25 TraesCS4D01G348700 chr7D 86.207 203 28 0 2134 2336 520952787 520952585 1.730000e-53 220
26 TraesCS4D01G348700 chr7D 97.619 84 2 0 1687 1770 520953040 520952957 1.070000e-30 145
27 TraesCS4D01G348700 chr7D 91.089 101 9 0 1962 2062 520952893 520952793 1.790000e-28 137
28 TraesCS4D01G348700 chr7B 93.135 437 28 2 3259 3695 8515239 8514805 1.120000e-179 640


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G348700 chr4D 502108384 502112078 3694 True 6824.00 6824 100.00000 1 3695 1 chr4D.!!$R2 3694
1 TraesCS4D01G348700 chr4B 646223013 646225830 2817 True 3899.00 3899 92.00600 486 3258 1 chr4B.!!$R1 2772
2 TraesCS4D01G348700 chr5A 685011960 685018938 6978 True 1033.25 2785 89.59725 217 3258 4 chr5A.!!$R2 3041
3 TraesCS4D01G348700 chr1D 260328024 260329634 1610 False 1232.00 1232 80.69600 1045 2664 1 chr1D.!!$F1 1619
4 TraesCS4D01G348700 chr1D 44837 46146 1309 False 1172.50 1181 98.86000 1167 2513 2 chr1D.!!$F2 1346
5 TraesCS4D01G348700 chr1A 340409590 340411203 1613 True 1221.00 1221 80.56100 1045 2667 1 chr1A.!!$R1 1622
6 TraesCS4D01G348700 chr1B 352879009 352880622 1613 True 1199.00 1199 80.31700 1045 2667 1 chr1B.!!$R1 1622
7 TraesCS4D01G348700 chr5D 515834795 515835631 836 True 265.25 542 91.28325 1277 2336 4 chr5D.!!$R2 1059

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
256 3851 0.040067 CGCAAAAGTGGGAAGCAGTC 60.040 55.0 0.0 0.0 40.06 3.51 F
952 4631 0.107848 CCCGCCTTTACCACCAGTAG 60.108 60.0 0.0 0.0 30.92 2.57 F
953 4632 0.611714 CCGCCTTTACCACCAGTAGT 59.388 55.0 0.0 0.0 30.92 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1843 5592 1.358402 CCGTCTGGCAGATCTCGAG 59.642 63.158 21.84 5.93 0.00 4.04 R
2667 6424 0.742281 TCTTGCTGCCGAAGATGCTC 60.742 55.000 0.00 0.00 0.00 4.26 R
2889 6727 7.115947 GCACTGTAAAGTGTAGACGAATTACTT 59.884 37.037 14.60 0.00 41.53 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.778415 CTGCCCGACGACGTGGAG 62.778 72.222 11.89 7.79 37.88 3.86
32 33 4.112341 CCCGACGACGTGGAGGAC 62.112 72.222 11.89 0.00 37.88 3.85
56 57 4.699522 GCCTCGTGGTCGGGCTTT 62.700 66.667 5.26 0.00 44.14 3.51
57 58 2.742372 CCTCGTGGTCGGGCTTTG 60.742 66.667 0.00 0.00 36.05 2.77
68 69 3.458653 GGCTTTGCCTTCTTGCCA 58.541 55.556 0.73 0.00 46.69 4.92
69 70 1.291272 GGCTTTGCCTTCTTGCCAG 59.709 57.895 0.73 0.00 46.69 4.85
70 71 1.181098 GGCTTTGCCTTCTTGCCAGA 61.181 55.000 0.73 0.00 46.69 3.86
72 73 1.321474 CTTTGCCTTCTTGCCAGACA 58.679 50.000 0.00 0.00 0.00 3.41
73 74 1.000938 CTTTGCCTTCTTGCCAGACAC 60.001 52.381 0.00 0.00 0.00 3.67
75 76 1.973812 GCCTTCTTGCCAGACACCC 60.974 63.158 0.00 0.00 0.00 4.61
76 77 1.455849 CCTTCTTGCCAGACACCCA 59.544 57.895 0.00 0.00 0.00 4.51
77 78 0.890996 CCTTCTTGCCAGACACCCAC 60.891 60.000 0.00 0.00 0.00 4.61
78 79 0.109342 CTTCTTGCCAGACACCCACT 59.891 55.000 0.00 0.00 0.00 4.00
79 80 0.550914 TTCTTGCCAGACACCCACTT 59.449 50.000 0.00 0.00 0.00 3.16
81 82 0.890996 CTTGCCAGACACCCACTTCC 60.891 60.000 0.00 0.00 0.00 3.46
83 84 1.600916 GCCAGACACCCACTTCCAC 60.601 63.158 0.00 0.00 0.00 4.02
84 85 1.836391 CCAGACACCCACTTCCACA 59.164 57.895 0.00 0.00 0.00 4.17
85 86 0.401738 CCAGACACCCACTTCCACAT 59.598 55.000 0.00 0.00 0.00 3.21
86 87 1.527034 CAGACACCCACTTCCACATG 58.473 55.000 0.00 0.00 0.00 3.21
87 88 0.250901 AGACACCCACTTCCACATGC 60.251 55.000 0.00 0.00 0.00 4.06
88 89 1.228552 ACACCCACTTCCACATGCC 60.229 57.895 0.00 0.00 0.00 4.40
89 90 1.075482 CACCCACTTCCACATGCCT 59.925 57.895 0.00 0.00 0.00 4.75
91 92 1.064463 CACCCACTTCCACATGCCTAT 60.064 52.381 0.00 0.00 0.00 2.57
92 93 1.640670 ACCCACTTCCACATGCCTATT 59.359 47.619 0.00 0.00 0.00 1.73
93 94 2.301346 CCCACTTCCACATGCCTATTC 58.699 52.381 0.00 0.00 0.00 1.75
94 95 2.301346 CCACTTCCACATGCCTATTCC 58.699 52.381 0.00 0.00 0.00 3.01
95 96 1.942657 CACTTCCACATGCCTATTCCG 59.057 52.381 0.00 0.00 0.00 4.30
96 97 1.837439 ACTTCCACATGCCTATTCCGA 59.163 47.619 0.00 0.00 0.00 4.55
98 99 0.104120 TCCACATGCCTATTCCGACG 59.896 55.000 0.00 0.00 0.00 5.12
99 100 0.880278 CCACATGCCTATTCCGACGG 60.880 60.000 7.84 7.84 0.00 4.79
100 101 1.227556 ACATGCCTATTCCGACGGC 60.228 57.895 9.66 0.00 44.02 5.68
101 102 1.069765 CATGCCTATTCCGACGGCT 59.930 57.895 9.66 1.08 44.09 5.52
102 103 1.069765 ATGCCTATTCCGACGGCTG 59.930 57.895 9.66 0.00 44.09 4.85
103 104 1.686325 ATGCCTATTCCGACGGCTGT 61.686 55.000 9.66 0.00 44.09 4.40
104 105 1.591863 GCCTATTCCGACGGCTGTC 60.592 63.158 16.12 16.12 40.62 3.51
112 113 4.436998 GACGGCTGTCGGGGAGTG 62.437 72.222 10.53 0.00 44.45 3.51
113 114 4.988716 ACGGCTGTCGGGGAGTGA 62.989 66.667 6.61 0.00 44.45 3.41
114 115 4.135153 CGGCTGTCGGGGAGTGAG 62.135 72.222 0.00 0.00 34.75 3.51
116 117 2.680352 GCTGTCGGGGAGTGAGGA 60.680 66.667 0.00 0.00 0.00 3.71
117 118 2.716017 GCTGTCGGGGAGTGAGGAG 61.716 68.421 0.00 0.00 0.00 3.69
120 121 4.075793 TCGGGGAGTGAGGAGGGG 62.076 72.222 0.00 0.00 0.00 4.79
123 124 4.779733 GGGAGTGAGGAGGGGCGA 62.780 72.222 0.00 0.00 0.00 5.54
124 125 3.151022 GGAGTGAGGAGGGGCGAG 61.151 72.222 0.00 0.00 0.00 5.03
125 126 3.844090 GAGTGAGGAGGGGCGAGC 61.844 72.222 0.00 0.00 0.00 5.03
127 128 4.154347 GTGAGGAGGGGCGAGCTG 62.154 72.222 0.00 0.00 0.00 4.24
144 145 4.165486 GGGCGGCGCTAGGGTTTA 62.165 66.667 32.30 0.00 0.00 2.01
146 147 2.186125 GCGGCGCTAGGGTTTACT 59.814 61.111 26.86 0.00 0.00 2.24
147 148 2.171725 GCGGCGCTAGGGTTTACTG 61.172 63.158 26.86 0.00 0.00 2.74
149 150 1.600638 GGCGCTAGGGTTTACTGGT 59.399 57.895 7.64 0.00 0.00 4.00
152 153 0.179119 CGCTAGGGTTTACTGGTCGG 60.179 60.000 0.00 0.00 0.00 4.79
153 154 0.177373 GCTAGGGTTTACTGGTCGGG 59.823 60.000 0.00 0.00 0.00 5.14
154 155 0.828677 CTAGGGTTTACTGGTCGGGG 59.171 60.000 0.00 0.00 0.00 5.73
155 156 1.266867 TAGGGTTTACTGGTCGGGGC 61.267 60.000 0.00 0.00 0.00 5.80
156 157 2.045634 GGTTTACTGGTCGGGGCC 60.046 66.667 0.00 0.00 0.00 5.80
157 158 2.435410 GTTTACTGGTCGGGGCCG 60.435 66.667 0.00 0.00 41.35 6.13
158 159 3.708544 TTTACTGGTCGGGGCCGG 61.709 66.667 4.42 4.42 40.67 6.13
159 160 4.700448 TTACTGGTCGGGGCCGGA 62.700 66.667 5.05 10.08 38.27 5.14
185 186 1.604604 ACGGGAGTGAAAATGTGTGG 58.395 50.000 0.00 0.00 44.82 4.17
186 187 1.142060 ACGGGAGTGAAAATGTGTGGA 59.858 47.619 0.00 0.00 44.82 4.02
187 188 1.535462 CGGGAGTGAAAATGTGTGGAC 59.465 52.381 0.00 0.00 0.00 4.02
188 189 1.535462 GGGAGTGAAAATGTGTGGACG 59.465 52.381 0.00 0.00 0.00 4.79
189 190 1.535462 GGAGTGAAAATGTGTGGACGG 59.465 52.381 0.00 0.00 0.00 4.79
192 193 1.209127 GAAAATGTGTGGACGGGCG 59.791 57.895 0.00 0.00 0.00 6.13
193 194 2.195123 GAAAATGTGTGGACGGGCGG 62.195 60.000 0.00 0.00 0.00 6.13
194 195 2.684192 AAAATGTGTGGACGGGCGGA 62.684 55.000 0.00 0.00 0.00 5.54
197 198 4.612412 GTGTGGACGGGCGGACAA 62.612 66.667 0.00 0.00 0.00 3.18
198 199 3.862991 TGTGGACGGGCGGACAAA 61.863 61.111 0.00 0.00 0.00 2.83
199 200 2.592287 GTGGACGGGCGGACAAAA 60.592 61.111 0.00 0.00 0.00 2.44
200 201 1.969589 GTGGACGGGCGGACAAAAT 60.970 57.895 0.00 0.00 0.00 1.82
201 202 1.969064 TGGACGGGCGGACAAAATG 60.969 57.895 0.00 0.00 0.00 2.32
202 203 2.696759 GGACGGGCGGACAAAATGG 61.697 63.158 0.00 0.00 0.00 3.16
203 204 2.675075 ACGGGCGGACAAAATGGG 60.675 61.111 0.00 0.00 0.00 4.00
204 205 2.675075 CGGGCGGACAAAATGGGT 60.675 61.111 0.00 0.00 0.00 4.51
206 207 1.605165 GGGCGGACAAAATGGGTCA 60.605 57.895 0.00 0.00 37.00 4.02
207 208 1.595093 GGGCGGACAAAATGGGTCAG 61.595 60.000 0.00 0.00 37.00 3.51
208 209 1.212751 GCGGACAAAATGGGTCAGC 59.787 57.895 2.24 2.24 46.09 4.26
209 210 1.501741 CGGACAAAATGGGTCAGCG 59.498 57.895 0.00 0.00 37.00 5.18
210 211 1.234615 CGGACAAAATGGGTCAGCGT 61.235 55.000 0.00 0.00 37.00 5.07
211 212 0.958822 GGACAAAATGGGTCAGCGTT 59.041 50.000 0.00 0.00 37.00 4.84
212 213 1.335872 GGACAAAATGGGTCAGCGTTG 60.336 52.381 0.00 0.00 37.00 4.10
213 214 0.673437 ACAAAATGGGTCAGCGTTGG 59.327 50.000 0.00 0.00 0.00 3.77
214 215 0.958091 CAAAATGGGTCAGCGTTGGA 59.042 50.000 0.00 0.00 0.00 3.53
215 216 1.068333 CAAAATGGGTCAGCGTTGGAG 60.068 52.381 0.00 0.00 0.00 3.86
216 217 0.110486 AAATGGGTCAGCGTTGGAGT 59.890 50.000 0.00 0.00 0.00 3.85
217 218 0.110486 AATGGGTCAGCGTTGGAGTT 59.890 50.000 0.00 0.00 0.00 3.01
218 219 0.606401 ATGGGTCAGCGTTGGAGTTG 60.606 55.000 0.00 0.00 0.00 3.16
219 220 1.227853 GGGTCAGCGTTGGAGTTGT 60.228 57.895 0.00 0.00 0.00 3.32
220 221 0.818040 GGGTCAGCGTTGGAGTTGTT 60.818 55.000 0.00 0.00 0.00 2.83
231 3826 5.519722 CGTTGGAGTTGTTCAGCTTTTATT 58.480 37.500 0.00 0.00 0.00 1.40
234 3829 6.707440 TGGAGTTGTTCAGCTTTTATTTCA 57.293 33.333 0.00 0.00 0.00 2.69
256 3851 0.040067 CGCAAAAGTGGGAAGCAGTC 60.040 55.000 0.00 0.00 40.06 3.51
292 3896 7.285566 ACTATCTGAATGATGTGTATTGCCTT 58.714 34.615 0.00 0.00 36.65 4.35
293 3897 7.776969 ACTATCTGAATGATGTGTATTGCCTTT 59.223 33.333 0.00 0.00 36.65 3.11
295 3899 7.230849 TCTGAATGATGTGTATTGCCTTTTT 57.769 32.000 0.00 0.00 0.00 1.94
317 3923 6.720012 TTTTTCTTCTTTTGAACAGTTGCC 57.280 33.333 0.00 0.00 34.31 4.52
342 3948 4.323562 GGGTAATCTGTAGGTGAGCAGTTT 60.324 45.833 0.00 0.00 34.57 2.66
431 4037 1.549203 ACATGCACCACATTTCCTCC 58.451 50.000 0.00 0.00 36.64 4.30
432 4038 1.076024 ACATGCACCACATTTCCTCCT 59.924 47.619 0.00 0.00 36.64 3.69
433 4039 2.308570 ACATGCACCACATTTCCTCCTA 59.691 45.455 0.00 0.00 36.64 2.94
434 4040 2.489938 TGCACCACATTTCCTCCTAC 57.510 50.000 0.00 0.00 0.00 3.18
435 4041 1.004277 TGCACCACATTTCCTCCTACC 59.996 52.381 0.00 0.00 0.00 3.18
436 4042 1.004277 GCACCACATTTCCTCCTACCA 59.996 52.381 0.00 0.00 0.00 3.25
437 4043 2.711542 CACCACATTTCCTCCTACCAC 58.288 52.381 0.00 0.00 0.00 4.16
438 4044 1.633945 ACCACATTTCCTCCTACCACC 59.366 52.381 0.00 0.00 0.00 4.61
439 4045 1.633432 CCACATTTCCTCCTACCACCA 59.367 52.381 0.00 0.00 0.00 4.17
440 4046 2.618045 CCACATTTCCTCCTACCACCAC 60.618 54.545 0.00 0.00 0.00 4.16
441 4047 2.039746 CACATTTCCTCCTACCACCACA 59.960 50.000 0.00 0.00 0.00 4.17
442 4048 2.305927 ACATTTCCTCCTACCACCACAG 59.694 50.000 0.00 0.00 0.00 3.66
443 4049 0.690762 TTTCCTCCTACCACCACAGC 59.309 55.000 0.00 0.00 0.00 4.40
456 4062 6.664428 ACCACCACAGCATAAAATAAAAGT 57.336 33.333 0.00 0.00 0.00 2.66
463 4069 4.495472 CAGCATAAAATAAAAGTGTCGCCG 59.505 41.667 0.00 0.00 0.00 6.46
464 4070 4.155280 AGCATAAAATAAAAGTGTCGCCGT 59.845 37.500 0.00 0.00 0.00 5.68
465 4071 4.854839 GCATAAAATAAAAGTGTCGCCGTT 59.145 37.500 0.00 0.00 0.00 4.44
466 4072 5.343860 GCATAAAATAAAAGTGTCGCCGTTT 59.656 36.000 0.00 0.00 0.00 3.60
467 4073 6.666451 GCATAAAATAAAAGTGTCGCCGTTTG 60.666 38.462 0.00 0.00 0.00 2.93
541 4149 3.812019 CTCGAGTCCACGACCCCG 61.812 72.222 3.62 0.00 37.37 5.73
595 4225 4.268405 CCATCAAGAACACAAAACAACAGC 59.732 41.667 0.00 0.00 0.00 4.40
607 4241 0.741574 ACAACAGCGTCCGTCAAACA 60.742 50.000 0.00 0.00 0.00 2.83
609 4243 0.655733 AACAGCGTCCGTCAAACAAG 59.344 50.000 0.00 0.00 0.00 3.16
651 4285 1.079073 CCCCTTTCTGCCAACCCAT 59.921 57.895 0.00 0.00 0.00 4.00
697 4349 5.633830 TCGAGTACGAGTAGAAATGGTTT 57.366 39.130 0.00 0.00 43.81 3.27
699 4351 4.561606 CGAGTACGAGTAGAAATGGTTTGG 59.438 45.833 0.00 0.00 42.66 3.28
708 4360 6.993079 AGTAGAAATGGTTTGGTTTTGGATC 58.007 36.000 0.00 0.00 0.00 3.36
711 4363 6.524734 AGAAATGGTTTGGTTTTGGATCTTC 58.475 36.000 0.00 0.00 0.00 2.87
720 4372 5.556915 TGGTTTTGGATCTTCGTATCTTGT 58.443 37.500 0.00 0.00 0.00 3.16
775 4433 2.974698 GATAGCCGCTGCCGCAAT 60.975 61.111 14.98 0.00 38.69 3.56
786 4444 4.354939 CCGCAATGCCAACGCCAA 62.355 61.111 0.00 0.00 0.00 4.52
789 4447 2.101835 GCAATGCCAACGCCAATGG 61.102 57.895 0.00 0.00 41.08 3.16
842 4504 2.884639 GCTTAAAGAAACAGTGGCCAGA 59.115 45.455 5.11 0.00 0.00 3.86
878 4547 3.209410 TCGTAGACGATTACTCTTCCCC 58.791 50.000 0.00 0.00 44.22 4.81
879 4548 3.118112 TCGTAGACGATTACTCTTCCCCT 60.118 47.826 0.00 0.00 44.22 4.79
880 4549 3.631227 CGTAGACGATTACTCTTCCCCTT 59.369 47.826 0.00 0.00 43.02 3.95
881 4550 4.261114 CGTAGACGATTACTCTTCCCCTTC 60.261 50.000 0.00 0.00 43.02 3.46
882 4551 3.032459 AGACGATTACTCTTCCCCTTCC 58.968 50.000 0.00 0.00 0.00 3.46
883 4552 2.102757 GACGATTACTCTTCCCCTTCCC 59.897 54.545 0.00 0.00 0.00 3.97
884 4553 1.416772 CGATTACTCTTCCCCTTCCCC 59.583 57.143 0.00 0.00 0.00 4.81
885 4554 2.777913 GATTACTCTTCCCCTTCCCCT 58.222 52.381 0.00 0.00 0.00 4.79
886 4555 1.966845 TTACTCTTCCCCTTCCCCTG 58.033 55.000 0.00 0.00 0.00 4.45
887 4556 0.620700 TACTCTTCCCCTTCCCCTGC 60.621 60.000 0.00 0.00 0.00 4.85
888 4557 2.614013 TCTTCCCCTTCCCCTGCC 60.614 66.667 0.00 0.00 0.00 4.85
889 4558 2.941025 CTTCCCCTTCCCCTGCCA 60.941 66.667 0.00 0.00 0.00 4.92
890 4559 3.264845 TTCCCCTTCCCCTGCCAC 61.265 66.667 0.00 0.00 0.00 5.01
891 4560 3.829311 TTCCCCTTCCCCTGCCACT 62.829 63.158 0.00 0.00 0.00 4.00
892 4561 3.732849 CCCCTTCCCCTGCCACTC 61.733 72.222 0.00 0.00 0.00 3.51
893 4562 2.612115 CCCTTCCCCTGCCACTCT 60.612 66.667 0.00 0.00 0.00 3.24
894 4563 2.673523 CCTTCCCCTGCCACTCTG 59.326 66.667 0.00 0.00 0.00 3.35
895 4564 2.045536 CTTCCCCTGCCACTCTGC 60.046 66.667 0.00 0.00 0.00 4.26
896 4565 3.635268 CTTCCCCTGCCACTCTGCC 62.635 68.421 0.00 0.00 0.00 4.85
897 4566 4.980592 TCCCCTGCCACTCTGCCA 62.981 66.667 0.00 0.00 0.00 4.92
952 4631 0.107848 CCCGCCTTTACCACCAGTAG 60.108 60.000 0.00 0.00 30.92 2.57
953 4632 0.611714 CCGCCTTTACCACCAGTAGT 59.388 55.000 0.00 0.00 30.92 2.73
958 4637 3.118847 GCCTTTACCACCAGTAGTACCTC 60.119 52.174 0.00 0.00 30.92 3.85
960 4639 1.755179 TACCACCAGTAGTACCTCGC 58.245 55.000 0.00 0.00 0.00 5.03
980 4659 1.217779 GAGCCAGTCAGGTCAGCTC 59.782 63.158 0.00 0.00 42.74 4.09
981 4660 1.534959 AGCCAGTCAGGTCAGCTCA 60.535 57.895 0.00 0.00 40.61 4.26
982 4661 1.079266 GCCAGTCAGGTCAGCTCAG 60.079 63.158 0.00 0.00 40.61 3.35
983 4662 1.079266 CCAGTCAGGTCAGCTCAGC 60.079 63.158 0.00 0.00 0.00 4.26
984 4663 1.543065 CCAGTCAGGTCAGCTCAGCT 61.543 60.000 0.00 0.00 40.77 4.24
985 4664 1.180907 CAGTCAGGTCAGCTCAGCTA 58.819 55.000 0.00 0.00 36.40 3.32
2693 6453 1.165907 TTCGGCAGCAAGAACCAGTG 61.166 55.000 0.00 0.00 0.00 3.66
2735 6561 3.953853 CGTTTTGCTGTATAGAAATCGCG 59.046 43.478 0.00 0.00 0.00 5.87
2852 6685 4.811555 CACTTTACAGTGCAGCAAGTTA 57.188 40.909 0.00 0.00 44.16 2.24
2857 6690 7.535258 CACTTTACAGTGCAGCAAGTTATTAAG 59.465 37.037 0.00 4.58 44.16 1.85
2900 6738 8.870879 GGTATATATTCCTGCAAGTAATTCGTC 58.129 37.037 1.25 0.00 0.00 4.20
2937 6777 7.035612 GTGCTATTTTGGTAATTCAGGAAAGG 58.964 38.462 0.00 0.00 0.00 3.11
2977 6818 1.353022 AGAGGACCCGGCTATCTAGAG 59.647 57.143 0.00 0.00 0.00 2.43
3106 6952 1.141881 CGGGGAGAAGATGACACGG 59.858 63.158 0.00 0.00 0.00 4.94
3164 7011 2.425578 GCTCCGAAGCCTGTACTATC 57.574 55.000 0.00 0.00 43.10 2.08
3166 7013 2.307768 CTCCGAAGCCTGTACTATCCA 58.692 52.381 0.00 0.00 0.00 3.41
3167 7014 2.894126 CTCCGAAGCCTGTACTATCCAT 59.106 50.000 0.00 0.00 0.00 3.41
3208 7057 1.673808 GGTACGACCGATCTTGGCCT 61.674 60.000 3.32 0.00 0.00 5.19
3271 7122 2.593436 CCCAGGGCGTGTTTCGTT 60.593 61.111 6.43 0.00 42.13 3.85
3272 7123 2.637025 CCAGGGCGTGTTTCGTTG 59.363 61.111 6.43 0.00 42.13 4.10
3273 7124 2.051345 CAGGGCGTGTTTCGTTGC 60.051 61.111 0.00 0.00 42.13 4.17
3274 7125 3.284449 AGGGCGTGTTTCGTTGCC 61.284 61.111 0.00 0.00 46.82 4.52
3276 7127 4.676586 GGCGTGTTTCGTTGCCCG 62.677 66.667 0.00 0.00 41.70 6.13
3278 7129 3.943034 CGTGTTTCGTTGCCCGCA 61.943 61.111 0.00 0.00 36.19 5.69
3279 7130 2.642700 GTGTTTCGTTGCCCGCAT 59.357 55.556 0.00 0.00 36.19 4.73
3280 7131 1.729131 GTGTTTCGTTGCCCGCATG 60.729 57.895 0.00 0.00 36.19 4.06
3281 7132 2.126502 GTTTCGTTGCCCGCATGG 60.127 61.111 0.00 0.00 36.19 3.66
3282 7133 2.281831 TTTCGTTGCCCGCATGGA 60.282 55.556 0.00 0.00 37.49 3.41
3283 7134 2.331893 TTTCGTTGCCCGCATGGAG 61.332 57.895 0.00 0.00 37.49 3.86
3284 7135 3.545124 TTCGTTGCCCGCATGGAGT 62.545 57.895 0.00 0.00 37.49 3.85
3285 7136 3.499737 CGTTGCCCGCATGGAGTC 61.500 66.667 0.00 0.00 37.49 3.36
3286 7137 3.134127 GTTGCCCGCATGGAGTCC 61.134 66.667 0.73 0.73 37.49 3.85
3287 7138 3.645660 TTGCCCGCATGGAGTCCA 61.646 61.111 15.88 15.88 37.49 4.02
3288 7139 3.203086 TTGCCCGCATGGAGTCCAA 62.203 57.895 17.71 0.00 36.95 3.53
3289 7140 2.124151 GCCCGCATGGAGTCCAAT 60.124 61.111 17.71 1.88 36.95 3.16
3290 7141 2.189499 GCCCGCATGGAGTCCAATC 61.189 63.158 17.71 9.87 36.95 2.67
3291 7142 1.224315 CCCGCATGGAGTCCAATCA 59.776 57.895 17.71 0.00 36.95 2.57
3292 7143 0.816825 CCCGCATGGAGTCCAATCAG 60.817 60.000 17.71 7.88 36.95 2.90
3293 7144 0.816825 CCGCATGGAGTCCAATCAGG 60.817 60.000 17.71 13.34 36.95 3.86
3294 7145 1.442526 CGCATGGAGTCCAATCAGGC 61.443 60.000 17.71 13.51 36.95 4.85
3295 7146 1.105759 GCATGGAGTCCAATCAGGCC 61.106 60.000 17.71 0.00 36.95 5.19
3296 7147 0.466922 CATGGAGTCCAATCAGGCCC 60.467 60.000 17.71 0.00 36.95 5.80
3297 7148 1.987807 ATGGAGTCCAATCAGGCCCG 61.988 60.000 17.71 0.00 36.95 6.13
3298 7149 2.514824 GAGTCCAATCAGGCCCGC 60.515 66.667 0.00 0.00 37.29 6.13
3299 7150 4.473520 AGTCCAATCAGGCCCGCG 62.474 66.667 0.00 0.00 37.29 6.46
3316 7167 4.814041 GCAGGAGGGGAGAGGCCT 62.814 72.222 3.86 3.86 36.66 5.19
3317 7168 2.767496 CAGGAGGGGAGAGGCCTG 60.767 72.222 12.00 0.00 41.62 4.85
3318 7169 3.288381 AGGAGGGGAGAGGCCTGT 61.288 66.667 12.00 5.74 36.66 4.00
3319 7170 2.285743 GGAGGGGAGAGGCCTGTT 60.286 66.667 12.00 0.00 36.66 3.16
3320 7171 1.925972 GGAGGGGAGAGGCCTGTTT 60.926 63.158 12.00 0.00 36.66 2.83
3321 7172 1.301293 GAGGGGAGAGGCCTGTTTG 59.699 63.158 12.00 0.00 36.66 2.93
3322 7173 2.203549 GAGGGGAGAGGCCTGTTTGG 62.204 65.000 12.00 0.00 36.66 3.28
3323 7174 2.539081 GGGGAGAGGCCTGTTTGGT 61.539 63.158 12.00 0.00 38.35 3.67
3324 7175 1.460699 GGGAGAGGCCTGTTTGGTT 59.539 57.895 12.00 0.00 38.35 3.67
3325 7176 0.895559 GGGAGAGGCCTGTTTGGTTG 60.896 60.000 12.00 0.00 38.35 3.77
3326 7177 1.527433 GGAGAGGCCTGTTTGGTTGC 61.527 60.000 12.00 0.00 38.35 4.17
3327 7178 1.527433 GAGAGGCCTGTTTGGTTGCC 61.527 60.000 12.00 0.00 44.35 4.52
3329 7180 2.736531 GGCCTGTTTGGTTGCCTG 59.263 61.111 0.00 0.00 40.77 4.85
3330 7181 1.832167 GGCCTGTTTGGTTGCCTGA 60.832 57.895 0.00 0.00 40.77 3.86
3331 7182 1.187567 GGCCTGTTTGGTTGCCTGAT 61.188 55.000 0.00 0.00 40.77 2.90
3332 7183 0.681175 GCCTGTTTGGTTGCCTGATT 59.319 50.000 0.00 0.00 38.35 2.57
3333 7184 1.070601 GCCTGTTTGGTTGCCTGATTT 59.929 47.619 0.00 0.00 38.35 2.17
3334 7185 2.485302 GCCTGTTTGGTTGCCTGATTTT 60.485 45.455 0.00 0.00 38.35 1.82
3335 7186 3.807553 CCTGTTTGGTTGCCTGATTTTT 58.192 40.909 0.00 0.00 0.00 1.94
3336 7187 3.809279 CCTGTTTGGTTGCCTGATTTTTC 59.191 43.478 0.00 0.00 0.00 2.29
3337 7188 4.443315 CCTGTTTGGTTGCCTGATTTTTCT 60.443 41.667 0.00 0.00 0.00 2.52
3338 7189 4.440880 TGTTTGGTTGCCTGATTTTTCTG 58.559 39.130 0.00 0.00 0.00 3.02
3339 7190 4.081198 TGTTTGGTTGCCTGATTTTTCTGT 60.081 37.500 0.00 0.00 0.00 3.41
3340 7191 4.751767 TTGGTTGCCTGATTTTTCTGTT 57.248 36.364 0.00 0.00 0.00 3.16
3341 7192 4.057406 TGGTTGCCTGATTTTTCTGTTG 57.943 40.909 0.00 0.00 0.00 3.33
3342 7193 3.181467 TGGTTGCCTGATTTTTCTGTTGG 60.181 43.478 0.00 0.00 0.00 3.77
3343 7194 3.392882 GTTGCCTGATTTTTCTGTTGGG 58.607 45.455 0.00 0.00 0.00 4.12
3344 7195 1.344114 TGCCTGATTTTTCTGTTGGGC 59.656 47.619 0.00 0.00 38.87 5.36
3345 7196 1.338105 GCCTGATTTTTCTGTTGGGCC 60.338 52.381 0.00 0.00 33.07 5.80
3346 7197 2.250924 CCTGATTTTTCTGTTGGGCCT 58.749 47.619 4.53 0.00 0.00 5.19
3347 7198 2.028748 CCTGATTTTTCTGTTGGGCCTG 60.029 50.000 4.53 0.00 0.00 4.85
3348 7199 2.629617 CTGATTTTTCTGTTGGGCCTGT 59.370 45.455 4.53 0.00 0.00 4.00
3349 7200 3.826157 CTGATTTTTCTGTTGGGCCTGTA 59.174 43.478 4.53 0.00 0.00 2.74
3350 7201 4.415596 TGATTTTTCTGTTGGGCCTGTAT 58.584 39.130 4.53 0.00 0.00 2.29
3351 7202 4.462483 TGATTTTTCTGTTGGGCCTGTATC 59.538 41.667 4.53 0.00 0.00 2.24
3352 7203 2.107950 TTTCTGTTGGGCCTGTATCG 57.892 50.000 4.53 0.00 0.00 2.92
3353 7204 0.392461 TTCTGTTGGGCCTGTATCGC 60.392 55.000 4.53 0.00 0.00 4.58
3354 7205 1.078497 CTGTTGGGCCTGTATCGCA 60.078 57.895 4.53 0.00 0.00 5.10
3355 7206 1.369091 CTGTTGGGCCTGTATCGCAC 61.369 60.000 4.53 0.00 0.00 5.34
3356 7207 2.125310 TTGGGCCTGTATCGCACG 60.125 61.111 4.53 0.00 29.87 5.34
3357 7208 4.830765 TGGGCCTGTATCGCACGC 62.831 66.667 4.53 0.00 29.87 5.34
3358 7209 4.530857 GGGCCTGTATCGCACGCT 62.531 66.667 0.84 0.00 31.27 5.07
3359 7210 2.962253 GGCCTGTATCGCACGCTC 60.962 66.667 0.00 0.00 31.27 5.03
3360 7211 2.962253 GCCTGTATCGCACGCTCC 60.962 66.667 0.00 0.00 0.00 4.70
3361 7212 2.808315 CCTGTATCGCACGCTCCT 59.192 61.111 0.00 0.00 0.00 3.69
3362 7213 1.141881 CCTGTATCGCACGCTCCTT 59.858 57.895 0.00 0.00 0.00 3.36
3363 7214 0.384309 CCTGTATCGCACGCTCCTTA 59.616 55.000 0.00 0.00 0.00 2.69
3364 7215 1.202371 CCTGTATCGCACGCTCCTTAA 60.202 52.381 0.00 0.00 0.00 1.85
3365 7216 2.536365 CTGTATCGCACGCTCCTTAAA 58.464 47.619 0.00 0.00 0.00 1.52
3366 7217 2.535984 CTGTATCGCACGCTCCTTAAAG 59.464 50.000 0.00 0.00 0.00 1.85
3367 7218 1.258197 GTATCGCACGCTCCTTAAAGC 59.742 52.381 0.00 0.00 38.97 3.51
3368 7219 0.391130 ATCGCACGCTCCTTAAAGCA 60.391 50.000 0.38 0.00 42.62 3.91
3369 7220 1.014044 TCGCACGCTCCTTAAAGCAG 61.014 55.000 0.38 0.00 42.62 4.24
3370 7221 1.135523 GCACGCTCCTTAAAGCAGC 59.864 57.895 0.38 0.04 42.62 5.25
3371 7222 1.796796 CACGCTCCTTAAAGCAGCC 59.203 57.895 0.38 0.00 42.62 4.85
3372 7223 0.674895 CACGCTCCTTAAAGCAGCCT 60.675 55.000 0.38 0.00 42.62 4.58
3373 7224 0.902531 ACGCTCCTTAAAGCAGCCTA 59.097 50.000 0.38 0.00 42.62 3.93
3374 7225 1.134670 ACGCTCCTTAAAGCAGCCTAG 60.135 52.381 0.38 0.00 42.62 3.02
3375 7226 1.137086 CGCTCCTTAAAGCAGCCTAGA 59.863 52.381 0.00 0.00 42.62 2.43
3376 7227 2.801342 CGCTCCTTAAAGCAGCCTAGAG 60.801 54.545 0.00 0.00 42.62 2.43
3377 7228 2.832563 CTCCTTAAAGCAGCCTAGAGC 58.167 52.381 0.00 0.00 44.25 4.09
3378 7229 1.486726 TCCTTAAAGCAGCCTAGAGCC 59.513 52.381 0.00 0.00 45.47 4.70
3379 7230 1.488393 CCTTAAAGCAGCCTAGAGCCT 59.512 52.381 0.00 0.00 45.47 4.58
3380 7231 2.559440 CTTAAAGCAGCCTAGAGCCTG 58.441 52.381 0.00 0.00 45.47 4.85
3381 7232 1.866015 TAAAGCAGCCTAGAGCCTGA 58.134 50.000 8.58 0.00 45.47 3.86
3382 7233 0.251634 AAAGCAGCCTAGAGCCTGAC 59.748 55.000 8.58 2.21 45.47 3.51
3383 7234 0.617249 AAGCAGCCTAGAGCCTGACT 60.617 55.000 8.58 3.92 45.47 3.41
3384 7235 1.042559 AGCAGCCTAGAGCCTGACTC 61.043 60.000 8.58 0.00 45.47 3.36
3391 7242 2.973899 GAGCCTGACTCGCTGGAA 59.026 61.111 0.00 0.00 36.48 3.53
3392 7243 1.293498 GAGCCTGACTCGCTGGAAA 59.707 57.895 0.00 0.00 36.48 3.13
3393 7244 1.004440 AGCCTGACTCGCTGGAAAC 60.004 57.895 0.00 0.00 37.79 2.78
3394 7245 2.383527 GCCTGACTCGCTGGAAACG 61.384 63.158 0.00 0.00 37.79 3.60
3395 7246 2.383527 CCTGACTCGCTGGAAACGC 61.384 63.158 0.00 0.00 37.79 4.84
3396 7247 1.373497 CTGACTCGCTGGAAACGCT 60.373 57.895 0.00 0.00 0.00 5.07
3397 7248 1.347817 CTGACTCGCTGGAAACGCTC 61.348 60.000 0.00 0.00 0.00 5.03
3398 7249 2.430921 ACTCGCTGGAAACGCTCG 60.431 61.111 0.00 0.00 0.00 5.03
3399 7250 3.181967 CTCGCTGGAAACGCTCGG 61.182 66.667 0.00 0.00 0.00 4.63
3400 7251 3.626680 CTCGCTGGAAACGCTCGGA 62.627 63.158 0.00 0.00 0.00 4.55
3401 7252 2.509336 CGCTGGAAACGCTCGGAT 60.509 61.111 0.00 0.00 0.00 4.18
3402 7253 2.517450 CGCTGGAAACGCTCGGATC 61.517 63.158 0.00 0.00 0.00 3.36
3403 7254 2.517450 GCTGGAAACGCTCGGATCG 61.517 63.158 0.00 0.00 0.00 3.69
3404 7255 1.878522 CTGGAAACGCTCGGATCGG 60.879 63.158 6.19 0.00 0.00 4.18
3405 7256 3.262686 GGAAACGCTCGGATCGGC 61.263 66.667 6.19 0.00 0.00 5.54
3406 7257 2.508439 GAAACGCTCGGATCGGCA 60.508 61.111 6.19 0.00 0.00 5.69
3407 7258 2.509336 AAACGCTCGGATCGGCAG 60.509 61.111 6.19 0.00 0.00 4.85
3408 7259 3.296709 AAACGCTCGGATCGGCAGT 62.297 57.895 6.19 0.00 0.00 4.40
3409 7260 2.781595 AAACGCTCGGATCGGCAGTT 62.782 55.000 6.19 0.00 0.00 3.16
3410 7261 2.509336 CGCTCGGATCGGCAGTTT 60.509 61.111 0.00 0.00 0.00 2.66
3411 7262 2.517450 CGCTCGGATCGGCAGTTTC 61.517 63.158 0.00 0.00 0.00 2.78
3412 7263 1.153549 GCTCGGATCGGCAGTTTCT 60.154 57.895 0.00 0.00 0.00 2.52
3413 7264 1.148759 GCTCGGATCGGCAGTTTCTC 61.149 60.000 0.00 0.00 0.00 2.87
3414 7265 0.867753 CTCGGATCGGCAGTTTCTCG 60.868 60.000 0.00 0.00 0.00 4.04
3415 7266 2.517450 CGGATCGGCAGTTTCTCGC 61.517 63.158 0.00 0.00 0.00 5.03
3416 7267 2.517450 GGATCGGCAGTTTCTCGCG 61.517 63.158 0.00 0.00 0.00 5.87
3417 7268 1.516386 GATCGGCAGTTTCTCGCGA 60.516 57.895 9.26 9.26 0.00 5.87
3418 7269 1.475441 GATCGGCAGTTTCTCGCGAG 61.475 60.000 30.03 30.03 0.00 5.03
3419 7270 3.843240 CGGCAGTTTCTCGCGAGC 61.843 66.667 30.97 18.79 0.00 5.03
3420 7271 3.491652 GGCAGTTTCTCGCGAGCC 61.492 66.667 30.97 23.82 34.71 4.70
3421 7272 2.738521 GCAGTTTCTCGCGAGCCA 60.739 61.111 30.97 17.10 0.00 4.75
3422 7273 2.734673 GCAGTTTCTCGCGAGCCAG 61.735 63.158 30.97 18.15 0.00 4.85
3423 7274 2.097038 CAGTTTCTCGCGAGCCAGG 61.097 63.158 30.97 14.72 0.00 4.45
3424 7275 3.491652 GTTTCTCGCGAGCCAGGC 61.492 66.667 30.97 14.51 0.00 4.85
3425 7276 3.695606 TTTCTCGCGAGCCAGGCT 61.696 61.111 30.97 16.12 43.88 4.58
3426 7277 3.939837 TTTCTCGCGAGCCAGGCTG 62.940 63.158 30.97 12.65 39.88 4.85
3428 7279 4.869440 CTCGCGAGCCAGGCTGAG 62.869 72.222 25.07 15.94 39.88 3.35
3470 7321 4.200283 GAGCGAGGTGAGGGCGAG 62.200 72.222 0.00 0.00 0.00 5.03
3489 7340 3.958860 GGGGGATGGCGGGAGATG 61.959 72.222 0.00 0.00 0.00 2.90
3490 7341 3.958860 GGGGATGGCGGGAGATGG 61.959 72.222 0.00 0.00 0.00 3.51
3491 7342 2.849162 GGGATGGCGGGAGATGGA 60.849 66.667 0.00 0.00 0.00 3.41
3492 7343 2.452064 GGGATGGCGGGAGATGGAA 61.452 63.158 0.00 0.00 0.00 3.53
3493 7344 1.531748 GGATGGCGGGAGATGGAAA 59.468 57.895 0.00 0.00 0.00 3.13
3494 7345 0.111253 GGATGGCGGGAGATGGAAAT 59.889 55.000 0.00 0.00 0.00 2.17
3495 7346 1.528129 GATGGCGGGAGATGGAAATC 58.472 55.000 0.00 0.00 0.00 2.17
3496 7347 1.072965 GATGGCGGGAGATGGAAATCT 59.927 52.381 0.00 0.00 0.00 2.40
3497 7348 0.181114 TGGCGGGAGATGGAAATCTG 59.819 55.000 0.00 0.00 0.00 2.90
3498 7349 0.536006 GGCGGGAGATGGAAATCTGG 60.536 60.000 0.00 0.00 0.00 3.86
3499 7350 1.169034 GCGGGAGATGGAAATCTGGC 61.169 60.000 0.00 0.00 0.00 4.85
3500 7351 0.882042 CGGGAGATGGAAATCTGGCG 60.882 60.000 0.00 0.00 0.00 5.69
3501 7352 1.169034 GGGAGATGGAAATCTGGCGC 61.169 60.000 0.00 0.00 0.00 6.53
3502 7353 1.502163 GGAGATGGAAATCTGGCGCG 61.502 60.000 0.00 0.00 0.00 6.86
3503 7354 2.110734 GAGATGGAAATCTGGCGCGC 62.111 60.000 25.94 25.94 0.00 6.86
3504 7355 3.186390 GATGGAAATCTGGCGCGCC 62.186 63.158 42.35 42.35 0.00 6.53
3507 7358 4.223964 GAAATCTGGCGCGCCGTC 62.224 66.667 41.73 28.45 39.42 4.79
3521 7372 2.820479 CGTCCCGGCGCCAAATTA 60.820 61.111 28.98 3.22 0.00 1.40
3522 7373 2.819552 CGTCCCGGCGCCAAATTAG 61.820 63.158 28.98 8.71 0.00 1.73
3523 7374 2.826738 TCCCGGCGCCAAATTAGC 60.827 61.111 28.98 0.00 0.00 3.09
3524 7375 3.899700 CCCGGCGCCAAATTAGCC 61.900 66.667 28.98 0.00 46.88 3.93
3527 7378 3.918544 GGCGCCAAATTAGCCTCA 58.081 55.556 24.80 0.00 46.83 3.86
3528 7379 1.433471 GGCGCCAAATTAGCCTCAC 59.567 57.895 24.80 0.00 46.83 3.51
3529 7380 1.433471 GCGCCAAATTAGCCTCACC 59.567 57.895 0.00 0.00 0.00 4.02
3530 7381 2.004808 GCGCCAAATTAGCCTCACCC 62.005 60.000 0.00 0.00 0.00 4.61
3531 7382 1.384222 CGCCAAATTAGCCTCACCCC 61.384 60.000 0.00 0.00 0.00 4.95
3532 7383 1.043116 GCCAAATTAGCCTCACCCCC 61.043 60.000 0.00 0.00 0.00 5.40
3546 7397 3.068881 CCCCCTTTCACTCGCTCA 58.931 61.111 0.00 0.00 0.00 4.26
3547 7398 1.376037 CCCCCTTTCACTCGCTCAC 60.376 63.158 0.00 0.00 0.00 3.51
3548 7399 1.376037 CCCCTTTCACTCGCTCACC 60.376 63.158 0.00 0.00 0.00 4.02
3549 7400 1.376037 CCCTTTCACTCGCTCACCC 60.376 63.158 0.00 0.00 0.00 4.61
3550 7401 1.371183 CCTTTCACTCGCTCACCCA 59.629 57.895 0.00 0.00 0.00 4.51
3551 7402 0.036010 CCTTTCACTCGCTCACCCAT 60.036 55.000 0.00 0.00 0.00 4.00
3552 7403 1.207089 CCTTTCACTCGCTCACCCATA 59.793 52.381 0.00 0.00 0.00 2.74
3553 7404 2.544685 CTTTCACTCGCTCACCCATAG 58.455 52.381 0.00 0.00 0.00 2.23
3554 7405 0.175760 TTCACTCGCTCACCCATAGC 59.824 55.000 0.00 0.00 36.60 2.97
3555 7406 1.227380 CACTCGCTCACCCATAGCC 60.227 63.158 0.00 0.00 36.60 3.93
3556 7407 1.685765 ACTCGCTCACCCATAGCCA 60.686 57.895 0.00 0.00 36.60 4.75
3557 7408 1.227380 CTCGCTCACCCATAGCCAC 60.227 63.158 0.00 0.00 36.60 5.01
3558 7409 1.680522 CTCGCTCACCCATAGCCACT 61.681 60.000 0.00 0.00 36.60 4.00
3559 7410 1.522355 CGCTCACCCATAGCCACTG 60.522 63.158 0.00 0.00 36.60 3.66
3560 7411 1.821332 GCTCACCCATAGCCACTGC 60.821 63.158 0.00 0.00 33.73 4.40
3561 7412 1.153086 CTCACCCATAGCCACTGCC 60.153 63.158 0.00 0.00 38.69 4.85
3562 7413 2.124151 CACCCATAGCCACTGCCC 60.124 66.667 0.00 0.00 38.69 5.36
3563 7414 2.613696 ACCCATAGCCACTGCCCA 60.614 61.111 0.00 0.00 38.69 5.36
3564 7415 2.124151 CCCATAGCCACTGCCCAC 60.124 66.667 0.00 0.00 38.69 4.61
3565 7416 2.124151 CCATAGCCACTGCCCACC 60.124 66.667 0.00 0.00 38.69 4.61
3566 7417 2.683465 CCATAGCCACTGCCCACCT 61.683 63.158 0.00 0.00 38.69 4.00
3567 7418 1.304282 CATAGCCACTGCCCACCTT 59.696 57.895 0.00 0.00 38.69 3.50
3568 7419 0.323725 CATAGCCACTGCCCACCTTT 60.324 55.000 0.00 0.00 38.69 3.11
3569 7420 0.034089 ATAGCCACTGCCCACCTTTC 60.034 55.000 0.00 0.00 38.69 2.62
3570 7421 1.133809 TAGCCACTGCCCACCTTTCT 61.134 55.000 0.00 0.00 38.69 2.52
3571 7422 1.531602 GCCACTGCCCACCTTTCTT 60.532 57.895 0.00 0.00 0.00 2.52
3572 7423 1.527433 GCCACTGCCCACCTTTCTTC 61.527 60.000 0.00 0.00 0.00 2.87
3573 7424 0.895559 CCACTGCCCACCTTTCTTCC 60.896 60.000 0.00 0.00 0.00 3.46
3574 7425 0.895559 CACTGCCCACCTTTCTTCCC 60.896 60.000 0.00 0.00 0.00 3.97
3575 7426 1.068352 ACTGCCCACCTTTCTTCCCT 61.068 55.000 0.00 0.00 0.00 4.20
3576 7427 0.991920 CTGCCCACCTTTCTTCCCTA 59.008 55.000 0.00 0.00 0.00 3.53
3577 7428 0.696501 TGCCCACCTTTCTTCCCTAC 59.303 55.000 0.00 0.00 0.00 3.18
3578 7429 0.992695 GCCCACCTTTCTTCCCTACT 59.007 55.000 0.00 0.00 0.00 2.57
3579 7430 1.340114 GCCCACCTTTCTTCCCTACTG 60.340 57.143 0.00 0.00 0.00 2.74
3580 7431 1.340114 CCCACCTTTCTTCCCTACTGC 60.340 57.143 0.00 0.00 0.00 4.40
3581 7432 1.340114 CCACCTTTCTTCCCTACTGCC 60.340 57.143 0.00 0.00 0.00 4.85
3582 7433 1.630878 CACCTTTCTTCCCTACTGCCT 59.369 52.381 0.00 0.00 0.00 4.75
3583 7434 1.909986 ACCTTTCTTCCCTACTGCCTC 59.090 52.381 0.00 0.00 0.00 4.70
3584 7435 1.909302 CCTTTCTTCCCTACTGCCTCA 59.091 52.381 0.00 0.00 0.00 3.86
3585 7436 2.355209 CCTTTCTTCCCTACTGCCTCAC 60.355 54.545 0.00 0.00 0.00 3.51
3586 7437 1.276622 TTCTTCCCTACTGCCTCACC 58.723 55.000 0.00 0.00 0.00 4.02
3587 7438 0.116342 TCTTCCCTACTGCCTCACCA 59.884 55.000 0.00 0.00 0.00 4.17
3588 7439 0.250513 CTTCCCTACTGCCTCACCAC 59.749 60.000 0.00 0.00 0.00 4.16
3589 7440 1.198759 TTCCCTACTGCCTCACCACC 61.199 60.000 0.00 0.00 0.00 4.61
3590 7441 2.579201 CCTACTGCCTCACCACCG 59.421 66.667 0.00 0.00 0.00 4.94
3591 7442 2.579201 CTACTGCCTCACCACCGG 59.421 66.667 0.00 0.00 0.00 5.28
3592 7443 3.665675 CTACTGCCTCACCACCGGC 62.666 68.421 0.00 0.00 46.46 6.13
3609 7460 4.228097 CGGCGGCTGCGATTTCAG 62.228 66.667 12.29 0.00 44.10 3.02
3610 7461 2.819595 GGCGGCTGCGATTTCAGA 60.820 61.111 12.29 0.00 44.10 3.27
3611 7462 2.182842 GGCGGCTGCGATTTCAGAT 61.183 57.895 12.29 0.00 44.10 2.90
3612 7463 1.278038 GCGGCTGCGATTTCAGATC 59.722 57.895 0.00 0.00 36.19 2.75
3613 7464 1.156645 GCGGCTGCGATTTCAGATCT 61.157 55.000 0.00 0.00 36.19 2.75
3614 7465 0.580578 CGGCTGCGATTTCAGATCTG 59.419 55.000 17.07 17.07 36.19 2.90
3615 7466 1.661341 GGCTGCGATTTCAGATCTGT 58.339 50.000 21.92 3.10 36.19 3.41
3616 7467 1.329906 GGCTGCGATTTCAGATCTGTG 59.670 52.381 21.92 9.38 36.19 3.66
3617 7468 1.267932 GCTGCGATTTCAGATCTGTGC 60.268 52.381 21.92 17.67 36.19 4.57
3618 7469 2.277969 CTGCGATTTCAGATCTGTGCT 58.722 47.619 21.92 7.87 36.19 4.40
3619 7470 3.451526 CTGCGATTTCAGATCTGTGCTA 58.548 45.455 21.92 6.91 36.19 3.49
3620 7471 4.056740 CTGCGATTTCAGATCTGTGCTAT 58.943 43.478 21.92 11.04 36.19 2.97
3621 7472 5.200368 TGCGATTTCAGATCTGTGCTATA 57.800 39.130 21.92 0.00 0.00 1.31
3622 7473 5.225642 TGCGATTTCAGATCTGTGCTATAG 58.774 41.667 21.92 11.91 0.00 1.31
3623 7474 4.624882 GCGATTTCAGATCTGTGCTATAGG 59.375 45.833 21.92 6.92 0.00 2.57
3624 7475 4.624882 CGATTTCAGATCTGTGCTATAGGC 59.375 45.833 21.92 3.46 42.22 3.93
3625 7476 3.650070 TTCAGATCTGTGCTATAGGCG 57.350 47.619 21.92 0.00 45.43 5.52
3626 7477 1.889170 TCAGATCTGTGCTATAGGCGG 59.111 52.381 21.92 0.00 45.43 6.13
3627 7478 0.605589 AGATCTGTGCTATAGGCGGC 59.394 55.000 0.00 0.00 45.43 6.53
3628 7479 0.734253 GATCTGTGCTATAGGCGGCG 60.734 60.000 0.51 0.51 45.43 6.46
3629 7480 2.159819 ATCTGTGCTATAGGCGGCGG 62.160 60.000 9.78 0.00 45.43 6.13
3630 7481 4.602259 TGTGCTATAGGCGGCGGC 62.602 66.667 27.24 27.24 45.43 6.53
3652 7503 3.134127 GAAGAGGCGGCGGCATTT 61.134 61.111 34.87 26.34 42.47 2.32
3653 7504 3.401243 GAAGAGGCGGCGGCATTTG 62.401 63.158 34.87 0.00 42.47 2.32
3662 7513 2.025156 CGGCATTTGCAGCGGATC 59.975 61.111 4.74 0.00 44.36 3.36
3663 7514 2.475466 CGGCATTTGCAGCGGATCT 61.475 57.895 4.74 0.00 44.36 2.75
3664 7515 1.065273 GGCATTTGCAGCGGATCTG 59.935 57.895 4.74 0.00 45.62 2.90
3665 7516 1.065273 GCATTTGCAGCGGATCTGG 59.935 57.895 3.14 0.00 43.06 3.86
3666 7517 1.660560 GCATTTGCAGCGGATCTGGT 61.661 55.000 0.00 0.00 43.06 4.00
3667 7518 0.099968 CATTTGCAGCGGATCTGGTG 59.900 55.000 26.07 26.07 43.06 4.17
3672 7523 4.479993 AGCGGATCTGGTGCTGCC 62.480 66.667 5.20 0.00 37.62 4.85
3674 7525 3.790437 CGGATCTGGTGCTGCCCT 61.790 66.667 0.00 0.00 36.04 5.19
3675 7526 2.679716 GGATCTGGTGCTGCCCTT 59.320 61.111 0.00 0.00 36.04 3.95
3676 7527 1.751927 GGATCTGGTGCTGCCCTTG 60.752 63.158 0.00 0.00 36.04 3.61
3677 7528 2.362120 ATCTGGTGCTGCCCTTGC 60.362 61.111 0.00 0.00 36.04 4.01
3678 7529 2.833604 GATCTGGTGCTGCCCTTGCT 62.834 60.000 0.00 0.00 38.71 3.91
3679 7530 3.371063 CTGGTGCTGCCCTTGCTG 61.371 66.667 0.00 0.00 38.71 4.41
3680 7531 4.208403 TGGTGCTGCCCTTGCTGT 62.208 61.111 0.00 0.00 38.57 4.40
3681 7532 2.914097 GGTGCTGCCCTTGCTGTT 60.914 61.111 0.00 0.00 38.57 3.16
3682 7533 2.337532 GTGCTGCCCTTGCTGTTG 59.662 61.111 0.00 0.00 38.57 3.33
3683 7534 2.913578 TGCTGCCCTTGCTGTTGG 60.914 61.111 0.00 0.00 38.57 3.77
3684 7535 4.368543 GCTGCCCTTGCTGTTGGC 62.369 66.667 0.00 0.00 45.56 4.52
3685 7536 3.688159 CTGCCCTTGCTGTTGGCC 61.688 66.667 0.00 0.00 44.72 5.36
3686 7537 4.536526 TGCCCTTGCTGTTGGCCA 62.537 61.111 0.00 0.00 44.72 5.36
3687 7538 2.999063 GCCCTTGCTGTTGGCCAT 60.999 61.111 6.09 0.00 39.30 4.40
3688 7539 3.010413 GCCCTTGCTGTTGGCCATC 62.010 63.158 6.09 6.55 39.30 3.51
3689 7540 2.703798 CCCTTGCTGTTGGCCATCG 61.704 63.158 6.09 3.69 40.92 3.84
3690 7541 1.973281 CCTTGCTGTTGGCCATCGT 60.973 57.895 6.09 0.00 40.92 3.73
3691 7542 1.503542 CTTGCTGTTGGCCATCGTC 59.496 57.895 6.09 1.96 40.92 4.20
3692 7543 0.957395 CTTGCTGTTGGCCATCGTCT 60.957 55.000 6.09 0.00 40.92 4.18
3693 7544 1.236616 TTGCTGTTGGCCATCGTCTG 61.237 55.000 6.09 3.39 40.92 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 4.778415 CTCCACGTCGTCGGGCAG 62.778 72.222 7.05 0.00 39.39 4.85
15 16 4.112341 GTCCTCCACGTCGTCGGG 62.112 72.222 7.05 1.40 41.85 5.14
40 41 2.742372 CAAAGCCCGACCACGAGG 60.742 66.667 0.00 0.00 42.66 4.63
41 42 3.423154 GCAAAGCCCGACCACGAG 61.423 66.667 0.00 0.00 42.66 4.18
57 58 1.973812 GGGTGTCTGGCAAGAAGGC 60.974 63.158 0.00 0.00 44.50 4.35
60 61 0.550914 AAGTGGGTGTCTGGCAAGAA 59.449 50.000 0.00 0.00 33.05 2.52
61 62 0.108585 GAAGTGGGTGTCTGGCAAGA 59.891 55.000 0.00 0.00 0.00 3.02
63 64 1.150536 GGAAGTGGGTGTCTGGCAA 59.849 57.895 0.00 0.00 0.00 4.52
64 65 2.075566 TGGAAGTGGGTGTCTGGCA 61.076 57.895 0.00 0.00 0.00 4.92
65 66 1.600916 GTGGAAGTGGGTGTCTGGC 60.601 63.158 0.00 0.00 0.00 4.85
66 67 0.401738 ATGTGGAAGTGGGTGTCTGG 59.598 55.000 0.00 0.00 0.00 3.86
67 68 1.527034 CATGTGGAAGTGGGTGTCTG 58.473 55.000 0.00 0.00 0.00 3.51
68 69 0.250901 GCATGTGGAAGTGGGTGTCT 60.251 55.000 0.00 0.00 0.00 3.41
69 70 1.244019 GGCATGTGGAAGTGGGTGTC 61.244 60.000 0.00 0.00 0.00 3.67
70 71 1.228552 GGCATGTGGAAGTGGGTGT 60.229 57.895 0.00 0.00 0.00 4.16
72 73 1.298953 ATAGGCATGTGGAAGTGGGT 58.701 50.000 0.00 0.00 0.00 4.51
73 74 2.301346 GAATAGGCATGTGGAAGTGGG 58.699 52.381 0.00 0.00 0.00 4.61
75 76 1.942657 CGGAATAGGCATGTGGAAGTG 59.057 52.381 0.00 0.00 0.00 3.16
76 77 1.837439 TCGGAATAGGCATGTGGAAGT 59.163 47.619 0.00 0.00 0.00 3.01
77 78 2.213499 GTCGGAATAGGCATGTGGAAG 58.787 52.381 0.00 0.00 0.00 3.46
78 79 1.472552 CGTCGGAATAGGCATGTGGAA 60.473 52.381 0.00 0.00 0.00 3.53
79 80 0.104120 CGTCGGAATAGGCATGTGGA 59.896 55.000 0.00 0.00 0.00 4.02
81 82 2.605094 CCGTCGGAATAGGCATGTG 58.395 57.895 4.91 0.00 0.00 3.21
87 88 4.732106 GACAGCCGTCGGAATAGG 57.268 61.111 17.49 0.85 31.07 2.57
95 96 4.436998 CACTCCCCGACAGCCGTC 62.437 72.222 0.00 0.00 38.91 4.79
96 97 4.988716 TCACTCCCCGACAGCCGT 62.989 66.667 0.00 0.00 36.31 5.68
98 99 3.775654 CCTCACTCCCCGACAGCC 61.776 72.222 0.00 0.00 0.00 4.85
99 100 2.680352 TCCTCACTCCCCGACAGC 60.680 66.667 0.00 0.00 0.00 4.40
100 101 2.055042 CCTCCTCACTCCCCGACAG 61.055 68.421 0.00 0.00 0.00 3.51
101 102 2.037367 CCTCCTCACTCCCCGACA 59.963 66.667 0.00 0.00 0.00 4.35
102 103 2.760385 CCCTCCTCACTCCCCGAC 60.760 72.222 0.00 0.00 0.00 4.79
103 104 4.075793 CCCCTCCTCACTCCCCGA 62.076 72.222 0.00 0.00 0.00 5.14
107 108 3.151022 CTCGCCCCTCCTCACTCC 61.151 72.222 0.00 0.00 0.00 3.85
108 109 3.844090 GCTCGCCCCTCCTCACTC 61.844 72.222 0.00 0.00 0.00 3.51
109 110 4.390556 AGCTCGCCCCTCCTCACT 62.391 66.667 0.00 0.00 0.00 3.41
110 111 4.154347 CAGCTCGCCCCTCCTCAC 62.154 72.222 0.00 0.00 0.00 3.51
127 128 4.165486 TAAACCCTAGCGCCGCCC 62.165 66.667 4.98 0.00 0.00 6.13
128 129 2.893895 GTAAACCCTAGCGCCGCC 60.894 66.667 4.98 0.00 0.00 6.13
129 130 2.171725 CAGTAAACCCTAGCGCCGC 61.172 63.158 2.29 0.00 0.00 6.53
130 131 1.520787 CCAGTAAACCCTAGCGCCG 60.521 63.158 2.29 0.00 0.00 6.46
131 132 0.461516 GACCAGTAAACCCTAGCGCC 60.462 60.000 2.29 0.00 0.00 6.53
132 133 0.804933 CGACCAGTAAACCCTAGCGC 60.805 60.000 0.00 0.00 0.00 5.92
133 134 0.179119 CCGACCAGTAAACCCTAGCG 60.179 60.000 0.00 0.00 0.00 4.26
134 135 0.177373 CCCGACCAGTAAACCCTAGC 59.823 60.000 0.00 0.00 0.00 3.42
137 138 2.599757 GCCCCGACCAGTAAACCCT 61.600 63.158 0.00 0.00 0.00 4.34
140 141 2.435410 CGGCCCCGACCAGTAAAC 60.435 66.667 0.00 0.00 42.83 2.01
141 142 3.708544 CCGGCCCCGACCAGTAAA 61.709 66.667 8.54 0.00 42.83 2.01
159 160 4.974438 TTCACTCCCGTGCCCCCT 62.974 66.667 0.00 0.00 40.99 4.79
161 162 1.304134 ATTTTCACTCCCGTGCCCC 60.304 57.895 0.00 0.00 40.99 5.80
162 163 0.893727 ACATTTTCACTCCCGTGCCC 60.894 55.000 0.00 0.00 40.99 5.36
163 164 0.240945 CACATTTTCACTCCCGTGCC 59.759 55.000 0.00 0.00 40.99 5.01
164 165 0.951558 ACACATTTTCACTCCCGTGC 59.048 50.000 0.00 0.00 40.99 5.34
165 166 1.266718 CCACACATTTTCACTCCCGTG 59.733 52.381 0.00 0.00 42.59 4.94
166 167 1.142060 TCCACACATTTTCACTCCCGT 59.858 47.619 0.00 0.00 0.00 5.28
167 168 1.535462 GTCCACACATTTTCACTCCCG 59.465 52.381 0.00 0.00 0.00 5.14
170 171 1.535462 CCCGTCCACACATTTTCACTC 59.465 52.381 0.00 0.00 0.00 3.51
171 172 1.604604 CCCGTCCACACATTTTCACT 58.395 50.000 0.00 0.00 0.00 3.41
172 173 0.039527 GCCCGTCCACACATTTTCAC 60.040 55.000 0.00 0.00 0.00 3.18
173 174 1.511318 CGCCCGTCCACACATTTTCA 61.511 55.000 0.00 0.00 0.00 2.69
174 175 1.209127 CGCCCGTCCACACATTTTC 59.791 57.895 0.00 0.00 0.00 2.29
175 176 2.265182 CCGCCCGTCCACACATTTT 61.265 57.895 0.00 0.00 0.00 1.82
176 177 2.671619 CCGCCCGTCCACACATTT 60.672 61.111 0.00 0.00 0.00 2.32
177 178 3.632080 TCCGCCCGTCCACACATT 61.632 61.111 0.00 0.00 0.00 2.71
178 179 4.388499 GTCCGCCCGTCCACACAT 62.388 66.667 0.00 0.00 0.00 3.21
180 181 4.612412 TTGTCCGCCCGTCCACAC 62.612 66.667 0.00 0.00 0.00 3.82
181 182 2.684192 ATTTTGTCCGCCCGTCCACA 62.684 55.000 0.00 0.00 0.00 4.17
182 183 1.969589 ATTTTGTCCGCCCGTCCAC 60.970 57.895 0.00 0.00 0.00 4.02
183 184 1.969064 CATTTTGTCCGCCCGTCCA 60.969 57.895 0.00 0.00 0.00 4.02
185 186 2.696759 CCCATTTTGTCCGCCCGTC 61.697 63.158 0.00 0.00 0.00 4.79
186 187 2.675075 CCCATTTTGTCCGCCCGT 60.675 61.111 0.00 0.00 0.00 5.28
187 188 2.675075 ACCCATTTTGTCCGCCCG 60.675 61.111 0.00 0.00 0.00 6.13
188 189 1.595093 CTGACCCATTTTGTCCGCCC 61.595 60.000 0.00 0.00 31.60 6.13
189 190 1.883021 CTGACCCATTTTGTCCGCC 59.117 57.895 0.00 0.00 31.60 6.13
192 193 0.958822 AACGCTGACCCATTTTGTCC 59.041 50.000 0.00 0.00 31.60 4.02
193 194 1.335872 CCAACGCTGACCCATTTTGTC 60.336 52.381 0.00 0.00 0.00 3.18
194 195 0.673437 CCAACGCTGACCCATTTTGT 59.327 50.000 0.00 0.00 0.00 2.83
196 197 1.247567 CTCCAACGCTGACCCATTTT 58.752 50.000 0.00 0.00 0.00 1.82
197 198 0.110486 ACTCCAACGCTGACCCATTT 59.890 50.000 0.00 0.00 0.00 2.32
198 199 0.110486 AACTCCAACGCTGACCCATT 59.890 50.000 0.00 0.00 0.00 3.16
199 200 0.606401 CAACTCCAACGCTGACCCAT 60.606 55.000 0.00 0.00 0.00 4.00
200 201 1.227823 CAACTCCAACGCTGACCCA 60.228 57.895 0.00 0.00 0.00 4.51
201 202 0.818040 AACAACTCCAACGCTGACCC 60.818 55.000 0.00 0.00 0.00 4.46
202 203 0.586802 GAACAACTCCAACGCTGACC 59.413 55.000 0.00 0.00 0.00 4.02
203 204 1.261619 CTGAACAACTCCAACGCTGAC 59.738 52.381 0.00 0.00 0.00 3.51
204 205 1.581934 CTGAACAACTCCAACGCTGA 58.418 50.000 0.00 0.00 0.00 4.26
206 207 0.179045 AGCTGAACAACTCCAACGCT 60.179 50.000 0.00 0.00 0.00 5.07
207 208 0.663153 AAGCTGAACAACTCCAACGC 59.337 50.000 0.00 0.00 0.00 4.84
208 209 3.420839 AAAAGCTGAACAACTCCAACG 57.579 42.857 0.00 0.00 0.00 4.10
209 210 6.978080 TGAAATAAAAGCTGAACAACTCCAAC 59.022 34.615 0.00 0.00 0.00 3.77
210 211 7.106439 TGAAATAAAAGCTGAACAACTCCAA 57.894 32.000 0.00 0.00 0.00 3.53
211 212 6.707440 TGAAATAAAAGCTGAACAACTCCA 57.293 33.333 0.00 0.00 0.00 3.86
212 213 6.144563 GCTTGAAATAAAAGCTGAACAACTCC 59.855 38.462 1.01 0.00 45.31 3.85
213 214 6.129352 CGCTTGAAATAAAAGCTGAACAACTC 60.129 38.462 6.59 0.00 46.33 3.01
214 215 5.687285 CGCTTGAAATAAAAGCTGAACAACT 59.313 36.000 6.59 0.00 46.33 3.16
215 216 5.610338 GCGCTTGAAATAAAAGCTGAACAAC 60.610 40.000 0.00 0.00 46.33 3.32
216 217 4.444056 GCGCTTGAAATAAAAGCTGAACAA 59.556 37.500 0.00 0.00 46.33 2.83
217 218 3.980775 GCGCTTGAAATAAAAGCTGAACA 59.019 39.130 0.00 0.00 46.33 3.18
218 219 3.980775 TGCGCTTGAAATAAAAGCTGAAC 59.019 39.130 9.73 0.00 46.33 3.18
219 220 4.235939 TGCGCTTGAAATAAAAGCTGAA 57.764 36.364 9.73 0.00 46.33 3.02
220 221 3.913548 TGCGCTTGAAATAAAAGCTGA 57.086 38.095 9.73 0.00 46.33 4.26
231 3826 1.066908 CTTCCCACTTTTGCGCTTGAA 59.933 47.619 9.73 0.00 0.00 2.69
234 3829 1.363807 GCTTCCCACTTTTGCGCTT 59.636 52.632 9.73 0.00 0.00 4.68
240 3835 2.158871 TGTACGACTGCTTCCCACTTTT 60.159 45.455 0.00 0.00 0.00 2.27
317 3923 2.766263 TGCTCACCTACAGATTACCCAG 59.234 50.000 0.00 0.00 0.00 4.45
342 3948 1.134753 CAGCAGACACCACTTGCAAAA 59.865 47.619 0.00 0.00 0.00 2.44
393 3999 2.346284 TTACTGGTGGTGGTGGTGGC 62.346 60.000 0.00 0.00 0.00 5.01
394 4000 0.536460 GTTACTGGTGGTGGTGGTGG 60.536 60.000 0.00 0.00 0.00 4.61
395 4001 0.181587 TGTTACTGGTGGTGGTGGTG 59.818 55.000 0.00 0.00 0.00 4.17
431 4037 7.754924 CACTTTTATTTTATGCTGTGGTGGTAG 59.245 37.037 0.00 0.00 0.00 3.18
432 4038 7.231722 ACACTTTTATTTTATGCTGTGGTGGTA 59.768 33.333 0.00 0.00 0.00 3.25
433 4039 6.041523 ACACTTTTATTTTATGCTGTGGTGGT 59.958 34.615 0.00 0.00 0.00 4.16
434 4040 6.454795 ACACTTTTATTTTATGCTGTGGTGG 58.545 36.000 0.00 0.00 0.00 4.61
435 4041 6.305399 CGACACTTTTATTTTATGCTGTGGTG 59.695 38.462 0.00 0.00 0.00 4.17
436 4042 6.378582 CGACACTTTTATTTTATGCTGTGGT 58.621 36.000 0.00 0.00 0.00 4.16
437 4043 5.286082 GCGACACTTTTATTTTATGCTGTGG 59.714 40.000 0.00 0.00 0.00 4.17
438 4044 5.286082 GGCGACACTTTTATTTTATGCTGTG 59.714 40.000 0.00 0.00 0.00 3.66
439 4045 5.399013 GGCGACACTTTTATTTTATGCTGT 58.601 37.500 0.00 0.00 0.00 4.40
440 4046 4.495472 CGGCGACACTTTTATTTTATGCTG 59.505 41.667 0.00 0.00 0.00 4.41
441 4047 4.155280 ACGGCGACACTTTTATTTTATGCT 59.845 37.500 16.62 0.00 0.00 3.79
442 4048 4.408694 ACGGCGACACTTTTATTTTATGC 58.591 39.130 16.62 0.00 0.00 3.14
443 4049 6.361214 ACAAACGGCGACACTTTTATTTTATG 59.639 34.615 16.62 0.00 0.00 1.90
456 4062 2.853731 AAATGAAACAAACGGCGACA 57.146 40.000 16.62 2.21 0.00 4.35
463 4069 4.869861 AGGTGTGAGCAAAATGAAACAAAC 59.130 37.500 0.00 0.00 0.00 2.93
464 4070 5.083533 AGGTGTGAGCAAAATGAAACAAA 57.916 34.783 0.00 0.00 0.00 2.83
465 4071 4.441356 GGAGGTGTGAGCAAAATGAAACAA 60.441 41.667 0.00 0.00 0.00 2.83
466 4072 3.068024 GGAGGTGTGAGCAAAATGAAACA 59.932 43.478 0.00 0.00 0.00 2.83
467 4073 3.642705 GGAGGTGTGAGCAAAATGAAAC 58.357 45.455 0.00 0.00 0.00 2.78
541 4149 1.172812 GGGAAGTGGTTGACAGTGCC 61.173 60.000 0.00 0.00 46.36 5.01
595 4225 1.083657 CACGCTTGTTTGACGGACG 60.084 57.895 0.00 0.00 0.00 4.79
607 4241 2.342648 GGGTCGGAGTTCACGCTT 59.657 61.111 0.00 0.00 0.00 4.68
609 4243 4.047059 TCGGGTCGGAGTTCACGC 62.047 66.667 0.00 0.00 31.29 5.34
642 4276 2.193536 GGGCGATGTATGGGTTGGC 61.194 63.158 0.00 0.00 0.00 4.52
651 4285 2.362397 GAGATCTCAGTTGGGCGATGTA 59.638 50.000 18.11 0.00 0.00 2.29
697 4349 5.556915 ACAAGATACGAAGATCCAAAACCA 58.443 37.500 0.00 0.00 0.00 3.67
699 4351 6.969828 AGACAAGATACGAAGATCCAAAAC 57.030 37.500 0.00 0.00 0.00 2.43
708 4360 2.345641 CACGCCAAGACAAGATACGAAG 59.654 50.000 0.00 0.00 0.00 3.79
711 4363 0.370273 GCACGCCAAGACAAGATACG 59.630 55.000 0.00 0.00 0.00 3.06
783 4441 1.466950 TCGCTTTCGTTTAGCCATTGG 59.533 47.619 0.00 0.00 35.18 3.16
785 4443 1.127951 CGTCGCTTTCGTTTAGCCATT 59.872 47.619 0.00 0.00 35.18 3.16
786 4444 0.719465 CGTCGCTTTCGTTTAGCCAT 59.281 50.000 0.00 0.00 35.18 4.40
789 4447 1.225664 GGCGTCGCTTTCGTTTAGC 60.226 57.895 18.11 0.00 36.96 3.09
842 4504 2.964464 TCTACGACTACGATCTCCCTCT 59.036 50.000 0.00 0.00 42.66 3.69
869 4538 1.925972 GCAGGGGAAGGGGAAGAGT 60.926 63.158 0.00 0.00 0.00 3.24
873 4542 3.264845 GTGGCAGGGGAAGGGGAA 61.265 66.667 0.00 0.00 0.00 3.97
877 4546 2.673523 CAGAGTGGCAGGGGAAGG 59.326 66.667 0.00 0.00 0.00 3.46
878 4547 2.045536 GCAGAGTGGCAGGGGAAG 60.046 66.667 0.00 0.00 0.00 3.46
879 4548 3.650950 GGCAGAGTGGCAGGGGAA 61.651 66.667 0.00 0.00 43.14 3.97
886 4555 4.729918 CAGGGGTGGCAGAGTGGC 62.730 72.222 0.00 0.00 44.03 5.01
887 4556 4.729918 GCAGGGGTGGCAGAGTGG 62.730 72.222 0.00 0.00 0.00 4.00
888 4557 3.618780 GAGCAGGGGTGGCAGAGTG 62.619 68.421 0.00 0.00 0.00 3.51
889 4558 3.325753 GAGCAGGGGTGGCAGAGT 61.326 66.667 0.00 0.00 0.00 3.24
890 4559 4.106925 GGAGCAGGGGTGGCAGAG 62.107 72.222 0.00 0.00 0.00 3.35
914 4593 1.986575 GAGGGAACAAGCGCATGAGC 61.987 60.000 20.91 14.17 37.42 4.26
952 4631 3.412879 GACTGGCTCGGCGAGGTAC 62.413 68.421 35.03 20.06 38.67 3.34
953 4632 3.138798 GACTGGCTCGGCGAGGTA 61.139 66.667 35.03 1.92 38.67 3.08
958 4637 4.803426 GACCTGACTGGCTCGGCG 62.803 72.222 0.00 0.00 40.22 6.46
960 4639 2.575993 CTGACCTGACTGGCTCGG 59.424 66.667 0.00 0.00 40.22 4.63
980 4659 2.185350 CCGGTCACTGGCTAGCTG 59.815 66.667 15.72 10.51 0.00 4.24
987 4666 2.124983 CTCATGGCCGGTCACTGG 60.125 66.667 13.07 3.95 0.00 4.00
989 4668 2.217038 ACACTCATGGCCGGTCACT 61.217 57.895 13.07 0.00 0.00 3.41
1843 5592 1.358402 CCGTCTGGCAGATCTCGAG 59.642 63.158 21.84 5.93 0.00 4.04
2667 6424 0.742281 TCTTGCTGCCGAAGATGCTC 60.742 55.000 0.00 0.00 0.00 4.26
2889 6727 7.115947 GCACTGTAAAGTGTAGACGAATTACTT 59.884 37.037 14.60 0.00 41.53 2.24
2900 6738 7.435068 ACCAAAATAGCACTGTAAAGTGTAG 57.565 36.000 14.60 0.00 41.53 2.74
3106 6952 0.321653 ACAGAGAACCGCCCAATGTC 60.322 55.000 0.00 0.00 0.00 3.06
3191 7040 1.813859 CAGGCCAAGATCGGTCGTA 59.186 57.895 5.01 0.00 35.10 3.43
3208 7057 0.035317 ACGGAGCTCATGTGAAAGCA 59.965 50.000 17.19 0.00 41.06 3.91
3269 7120 3.134127 GGACTCCATGCGGGCAAC 61.134 66.667 0.00 0.00 36.21 4.17
3270 7121 2.497792 ATTGGACTCCATGCGGGCAA 62.498 55.000 0.00 0.00 36.21 4.52
3271 7122 2.891941 GATTGGACTCCATGCGGGCA 62.892 60.000 0.00 0.00 36.21 5.36
3272 7123 2.124151 ATTGGACTCCATGCGGGC 60.124 61.111 0.00 0.00 36.21 6.13
3273 7124 0.816825 CTGATTGGACTCCATGCGGG 60.817 60.000 0.00 0.00 31.53 6.13
3274 7125 0.816825 CCTGATTGGACTCCATGCGG 60.817 60.000 0.00 0.00 38.35 5.69
3275 7126 1.442526 GCCTGATTGGACTCCATGCG 61.443 60.000 0.00 0.00 38.35 4.73
3276 7127 1.105759 GGCCTGATTGGACTCCATGC 61.106 60.000 0.00 0.00 41.93 4.06
3277 7128 0.466922 GGGCCTGATTGGACTCCATG 60.467 60.000 0.84 0.00 45.52 3.66
3278 7129 1.925888 GGGCCTGATTGGACTCCAT 59.074 57.895 0.84 0.00 45.52 3.41
3279 7130 2.669133 CGGGCCTGATTGGACTCCA 61.669 63.158 5.28 0.00 45.52 3.86
3280 7131 2.190578 CGGGCCTGATTGGACTCC 59.809 66.667 5.28 0.00 45.52 3.85
3281 7132 2.514824 GCGGGCCTGATTGGACTC 60.515 66.667 18.31 0.00 45.52 3.36
3282 7133 4.473520 CGCGGGCCTGATTGGACT 62.474 66.667 18.31 0.00 45.52 3.85
3299 7150 4.814041 AGGCCTCTCCCCTCCTGC 62.814 72.222 0.00 0.00 34.51 4.85
3300 7151 2.767496 CAGGCCTCTCCCCTCCTG 60.767 72.222 0.00 0.00 39.95 3.86
3301 7152 2.423479 AAACAGGCCTCTCCCCTCCT 62.423 60.000 0.00 0.00 34.51 3.69
3302 7153 1.925972 AAACAGGCCTCTCCCCTCC 60.926 63.158 0.00 0.00 34.51 4.30
3303 7154 1.301293 CAAACAGGCCTCTCCCCTC 59.699 63.158 0.00 0.00 34.51 4.30
3304 7155 2.234296 CCAAACAGGCCTCTCCCCT 61.234 63.158 0.00 0.00 34.51 4.79
3305 7156 2.081585 AACCAAACAGGCCTCTCCCC 62.082 60.000 0.00 0.00 43.14 4.81
3306 7157 0.895559 CAACCAAACAGGCCTCTCCC 60.896 60.000 0.00 0.00 43.14 4.30
3307 7158 1.527433 GCAACCAAACAGGCCTCTCC 61.527 60.000 0.00 0.00 43.14 3.71
3308 7159 1.527433 GGCAACCAAACAGGCCTCTC 61.527 60.000 0.00 0.00 43.09 3.20
3309 7160 1.531602 GGCAACCAAACAGGCCTCT 60.532 57.895 0.00 0.00 43.09 3.69
3310 7161 3.051210 GGCAACCAAACAGGCCTC 58.949 61.111 0.00 0.00 43.09 4.70
3312 7163 1.187567 ATCAGGCAACCAAACAGGCC 61.188 55.000 0.00 0.00 46.77 5.19
3313 7164 0.681175 AATCAGGCAACCAAACAGGC 59.319 50.000 0.00 0.00 43.14 4.85
3314 7165 3.473923 AAAATCAGGCAACCAAACAGG 57.526 42.857 0.00 0.00 45.67 4.00
3315 7166 4.508861 CAGAAAAATCAGGCAACCAAACAG 59.491 41.667 0.00 0.00 37.17 3.16
3316 7167 4.081198 ACAGAAAAATCAGGCAACCAAACA 60.081 37.500 0.00 0.00 37.17 2.83
3317 7168 4.441792 ACAGAAAAATCAGGCAACCAAAC 58.558 39.130 0.00 0.00 37.17 2.93
3318 7169 4.751767 ACAGAAAAATCAGGCAACCAAA 57.248 36.364 0.00 0.00 37.17 3.28
3319 7170 4.440880 CAACAGAAAAATCAGGCAACCAA 58.559 39.130 0.00 0.00 37.17 3.67
3320 7171 3.181467 CCAACAGAAAAATCAGGCAACCA 60.181 43.478 0.00 0.00 37.17 3.67
3321 7172 3.392882 CCAACAGAAAAATCAGGCAACC 58.607 45.455 0.00 0.00 37.17 3.77
3322 7173 3.392882 CCCAACAGAAAAATCAGGCAAC 58.607 45.455 0.00 0.00 0.00 4.17
3323 7174 2.224257 GCCCAACAGAAAAATCAGGCAA 60.224 45.455 0.00 0.00 39.01 4.52
3324 7175 1.344114 GCCCAACAGAAAAATCAGGCA 59.656 47.619 0.00 0.00 39.01 4.75
3325 7176 1.338105 GGCCCAACAGAAAAATCAGGC 60.338 52.381 0.00 0.00 38.45 4.85
3326 7177 2.028748 CAGGCCCAACAGAAAAATCAGG 60.029 50.000 0.00 0.00 0.00 3.86
3327 7178 2.629617 ACAGGCCCAACAGAAAAATCAG 59.370 45.455 0.00 0.00 0.00 2.90
3328 7179 2.676748 ACAGGCCCAACAGAAAAATCA 58.323 42.857 0.00 0.00 0.00 2.57
3329 7180 4.438744 CGATACAGGCCCAACAGAAAAATC 60.439 45.833 0.00 0.00 0.00 2.17
3330 7181 3.443681 CGATACAGGCCCAACAGAAAAAT 59.556 43.478 0.00 0.00 0.00 1.82
3331 7182 2.817258 CGATACAGGCCCAACAGAAAAA 59.183 45.455 0.00 0.00 0.00 1.94
3332 7183 2.432444 CGATACAGGCCCAACAGAAAA 58.568 47.619 0.00 0.00 0.00 2.29
3333 7184 1.948611 GCGATACAGGCCCAACAGAAA 60.949 52.381 0.00 0.00 0.00 2.52
3334 7185 0.392461 GCGATACAGGCCCAACAGAA 60.392 55.000 0.00 0.00 0.00 3.02
3335 7186 1.220749 GCGATACAGGCCCAACAGA 59.779 57.895 0.00 0.00 0.00 3.41
3336 7187 1.078497 TGCGATACAGGCCCAACAG 60.078 57.895 0.00 0.00 0.00 3.16
3337 7188 1.376683 GTGCGATACAGGCCCAACA 60.377 57.895 0.00 0.00 0.00 3.33
3338 7189 2.461110 CGTGCGATACAGGCCCAAC 61.461 63.158 0.00 0.00 0.00 3.77
3339 7190 2.125310 CGTGCGATACAGGCCCAA 60.125 61.111 0.00 0.00 0.00 4.12
3344 7195 0.384309 TAAGGAGCGTGCGATACAGG 59.616 55.000 0.00 0.00 37.22 4.00
3345 7196 2.203800 TTAAGGAGCGTGCGATACAG 57.796 50.000 0.00 0.00 0.00 2.74
3346 7197 2.536365 CTTTAAGGAGCGTGCGATACA 58.464 47.619 0.00 0.00 0.00 2.29
3347 7198 1.258197 GCTTTAAGGAGCGTGCGATAC 59.742 52.381 0.00 0.00 32.23 2.24
3348 7199 1.134936 TGCTTTAAGGAGCGTGCGATA 60.135 47.619 0.00 0.00 45.64 2.92
3349 7200 0.391130 TGCTTTAAGGAGCGTGCGAT 60.391 50.000 0.00 0.00 45.64 4.58
3350 7201 1.005512 TGCTTTAAGGAGCGTGCGA 60.006 52.632 0.00 0.00 45.64 5.10
3351 7202 1.421485 CTGCTTTAAGGAGCGTGCG 59.579 57.895 0.00 0.00 45.64 5.34
3357 7208 2.484594 GGCTCTAGGCTGCTTTAAGGAG 60.485 54.545 9.17 9.17 41.46 3.69
3358 7209 1.486726 GGCTCTAGGCTGCTTTAAGGA 59.513 52.381 0.00 0.00 41.46 3.36
3359 7210 1.960417 GGCTCTAGGCTGCTTTAAGG 58.040 55.000 0.00 0.00 41.46 2.69
3369 7220 2.124693 AGCGAGTCAGGCTCTAGGC 61.125 63.158 0.00 0.00 41.98 3.93
3370 7221 1.732917 CAGCGAGTCAGGCTCTAGG 59.267 63.158 0.00 0.00 41.98 3.02
3371 7222 0.749818 TCCAGCGAGTCAGGCTCTAG 60.750 60.000 0.00 0.00 41.98 2.43
3372 7223 0.323451 TTCCAGCGAGTCAGGCTCTA 60.323 55.000 0.00 0.00 41.98 2.43
3373 7224 1.188219 TTTCCAGCGAGTCAGGCTCT 61.188 55.000 0.00 0.00 41.98 4.09
3374 7225 1.016653 GTTTCCAGCGAGTCAGGCTC 61.017 60.000 0.00 0.00 39.08 4.70
3375 7226 1.004440 GTTTCCAGCGAGTCAGGCT 60.004 57.895 0.00 0.00 42.61 4.58
3376 7227 2.383527 CGTTTCCAGCGAGTCAGGC 61.384 63.158 0.00 0.00 0.00 4.85
3377 7228 2.383527 GCGTTTCCAGCGAGTCAGG 61.384 63.158 0.00 0.00 0.00 3.86
3378 7229 1.347817 GAGCGTTTCCAGCGAGTCAG 61.348 60.000 0.00 0.00 40.04 3.51
3379 7230 1.372997 GAGCGTTTCCAGCGAGTCA 60.373 57.895 0.00 0.00 40.04 3.41
3380 7231 2.437343 CGAGCGTTTCCAGCGAGTC 61.437 63.158 0.00 0.00 40.04 3.36
3381 7232 2.430921 CGAGCGTTTCCAGCGAGT 60.431 61.111 0.00 0.00 40.04 4.18
3382 7233 2.890847 ATCCGAGCGTTTCCAGCGAG 62.891 60.000 0.00 0.00 40.04 5.03
3383 7234 2.884087 GATCCGAGCGTTTCCAGCGA 62.884 60.000 0.00 0.00 40.04 4.93
3384 7235 2.509336 ATCCGAGCGTTTCCAGCG 60.509 61.111 0.00 0.00 40.04 5.18
3385 7236 2.517450 CGATCCGAGCGTTTCCAGC 61.517 63.158 0.00 0.00 0.00 4.85
3386 7237 1.878522 CCGATCCGAGCGTTTCCAG 60.879 63.158 5.19 0.00 0.00 3.86
3387 7238 2.183300 CCGATCCGAGCGTTTCCA 59.817 61.111 5.19 0.00 0.00 3.53
3388 7239 3.262686 GCCGATCCGAGCGTTTCC 61.263 66.667 5.19 0.00 0.00 3.13
3389 7240 2.508439 TGCCGATCCGAGCGTTTC 60.508 61.111 5.19 0.00 0.00 2.78
3390 7241 2.509336 CTGCCGATCCGAGCGTTT 60.509 61.111 5.19 0.00 0.00 3.60
3391 7242 2.781595 AAACTGCCGATCCGAGCGTT 62.782 55.000 5.19 0.00 0.00 4.84
3392 7243 3.296709 AAACTGCCGATCCGAGCGT 62.297 57.895 5.19 0.00 0.00 5.07
3393 7244 2.509336 AAACTGCCGATCCGAGCG 60.509 61.111 0.00 0.00 0.00 5.03
3394 7245 1.148759 GAGAAACTGCCGATCCGAGC 61.149 60.000 0.00 0.00 0.00 5.03
3395 7246 0.867753 CGAGAAACTGCCGATCCGAG 60.868 60.000 0.00 0.00 0.00 4.63
3396 7247 1.138883 CGAGAAACTGCCGATCCGA 59.861 57.895 0.00 0.00 0.00 4.55
3397 7248 2.517450 GCGAGAAACTGCCGATCCG 61.517 63.158 0.00 0.00 0.00 4.18
3398 7249 2.517450 CGCGAGAAACTGCCGATCC 61.517 63.158 0.00 0.00 0.00 3.36
3399 7250 1.475441 CTCGCGAGAAACTGCCGATC 61.475 60.000 32.06 0.00 41.32 3.69
3400 7251 1.517257 CTCGCGAGAAACTGCCGAT 60.517 57.895 32.06 0.00 41.32 4.18
3401 7252 2.126463 CTCGCGAGAAACTGCCGA 60.126 61.111 32.06 0.00 41.32 5.54
3402 7253 3.843240 GCTCGCGAGAAACTGCCG 61.843 66.667 38.74 11.21 41.32 5.69
3403 7254 3.491652 GGCTCGCGAGAAACTGCC 61.492 66.667 38.74 27.66 39.96 4.85
3404 7255 2.734673 CTGGCTCGCGAGAAACTGC 61.735 63.158 38.74 22.87 41.32 4.40
3405 7256 2.097038 CCTGGCTCGCGAGAAACTG 61.097 63.158 38.74 26.67 41.32 3.16
3406 7257 2.262915 CCTGGCTCGCGAGAAACT 59.737 61.111 38.74 0.00 41.32 2.66
3407 7258 3.491652 GCCTGGCTCGCGAGAAAC 61.492 66.667 38.74 26.01 41.32 2.78
3408 7259 3.695606 AGCCTGGCTCGCGAGAAA 61.696 61.111 38.74 23.58 41.32 2.52
3409 7260 4.441695 CAGCCTGGCTCGCGAGAA 62.442 66.667 38.74 23.94 41.32 2.87
3411 7262 4.869440 CTCAGCCTGGCTCGCGAG 62.869 72.222 31.37 31.37 36.40 5.03
3453 7304 4.200283 CTCGCCCTCACCTCGCTC 62.200 72.222 0.00 0.00 0.00 5.03
3472 7323 3.958860 CATCTCCCGCCATCCCCC 61.959 72.222 0.00 0.00 0.00 5.40
3473 7324 3.958860 CCATCTCCCGCCATCCCC 61.959 72.222 0.00 0.00 0.00 4.81
3474 7325 1.994885 TTTCCATCTCCCGCCATCCC 61.995 60.000 0.00 0.00 0.00 3.85
3475 7326 0.111253 ATTTCCATCTCCCGCCATCC 59.889 55.000 0.00 0.00 0.00 3.51
3476 7327 1.072965 AGATTTCCATCTCCCGCCATC 59.927 52.381 0.00 0.00 34.26 3.51
3477 7328 1.143813 AGATTTCCATCTCCCGCCAT 58.856 50.000 0.00 0.00 34.26 4.40
3478 7329 0.181114 CAGATTTCCATCTCCCGCCA 59.819 55.000 0.00 0.00 37.71 5.69
3479 7330 0.536006 CCAGATTTCCATCTCCCGCC 60.536 60.000 0.00 0.00 37.71 6.13
3480 7331 1.169034 GCCAGATTTCCATCTCCCGC 61.169 60.000 0.00 0.00 37.71 6.13
3481 7332 0.882042 CGCCAGATTTCCATCTCCCG 60.882 60.000 0.00 0.00 37.71 5.14
3482 7333 1.169034 GCGCCAGATTTCCATCTCCC 61.169 60.000 0.00 0.00 37.71 4.30
3483 7334 1.502163 CGCGCCAGATTTCCATCTCC 61.502 60.000 0.00 0.00 37.71 3.71
3484 7335 1.937391 CGCGCCAGATTTCCATCTC 59.063 57.895 0.00 0.00 37.71 2.75
3485 7336 2.182842 GCGCGCCAGATTTCCATCT 61.183 57.895 23.24 0.00 40.79 2.90
3486 7337 2.329339 GCGCGCCAGATTTCCATC 59.671 61.111 23.24 0.00 0.00 3.51
3487 7338 3.211963 GGCGCGCCAGATTTCCAT 61.212 61.111 43.55 0.00 35.81 3.41
3490 7341 4.223964 GACGGCGCGCCAGATTTC 62.224 66.667 45.26 28.73 35.37 2.17
3505 7356 3.107447 CTAATTTGGCGCCGGGAC 58.893 61.111 23.90 0.00 0.00 4.46
3506 7357 2.826738 GCTAATTTGGCGCCGGGA 60.827 61.111 23.90 10.59 0.00 5.14
3507 7358 3.899700 GGCTAATTTGGCGCCGGG 61.900 66.667 23.90 8.75 33.64 5.73
3510 7361 1.433471 GTGAGGCTAATTTGGCGCC 59.567 57.895 22.73 22.73 44.09 6.53
3511 7362 1.433471 GGTGAGGCTAATTTGGCGC 59.567 57.895 9.83 9.83 37.59 6.53
3512 7363 1.384222 GGGGTGAGGCTAATTTGGCG 61.384 60.000 7.74 0.00 37.59 5.69
3513 7364 1.043116 GGGGGTGAGGCTAATTTGGC 61.043 60.000 5.30 5.30 0.00 4.52
3514 7365 3.207452 GGGGGTGAGGCTAATTTGG 57.793 57.895 0.00 0.00 0.00 3.28
3529 7380 1.376037 GTGAGCGAGTGAAAGGGGG 60.376 63.158 0.00 0.00 0.00 5.40
3530 7381 1.376037 GGTGAGCGAGTGAAAGGGG 60.376 63.158 0.00 0.00 0.00 4.79
3531 7382 1.376037 GGGTGAGCGAGTGAAAGGG 60.376 63.158 0.00 0.00 0.00 3.95
3532 7383 0.036010 ATGGGTGAGCGAGTGAAAGG 60.036 55.000 0.00 0.00 0.00 3.11
3533 7384 2.544685 CTATGGGTGAGCGAGTGAAAG 58.455 52.381 0.00 0.00 0.00 2.62
3534 7385 1.405526 GCTATGGGTGAGCGAGTGAAA 60.406 52.381 0.00 0.00 0.00 2.69
3535 7386 0.175760 GCTATGGGTGAGCGAGTGAA 59.824 55.000 0.00 0.00 0.00 3.18
3536 7387 1.676678 GGCTATGGGTGAGCGAGTGA 61.677 60.000 0.00 0.00 41.06 3.41
3537 7388 1.227380 GGCTATGGGTGAGCGAGTG 60.227 63.158 0.00 0.00 41.06 3.51
3538 7389 1.685765 TGGCTATGGGTGAGCGAGT 60.686 57.895 0.00 0.00 41.06 4.18
3539 7390 1.227380 GTGGCTATGGGTGAGCGAG 60.227 63.158 0.00 0.00 41.06 5.03
3540 7391 1.685765 AGTGGCTATGGGTGAGCGA 60.686 57.895 0.00 0.00 41.06 4.93
3541 7392 1.522355 CAGTGGCTATGGGTGAGCG 60.522 63.158 0.00 0.00 41.06 5.03
3542 7393 1.821332 GCAGTGGCTATGGGTGAGC 60.821 63.158 0.00 0.00 39.33 4.26
3543 7394 1.153086 GGCAGTGGCTATGGGTGAG 60.153 63.158 9.90 0.00 40.87 3.51
3544 7395 2.679342 GGGCAGTGGCTATGGGTGA 61.679 63.158 17.16 0.00 40.87 4.02
3545 7396 2.124151 GGGCAGTGGCTATGGGTG 60.124 66.667 17.16 0.00 40.87 4.61
3546 7397 2.613696 TGGGCAGTGGCTATGGGT 60.614 61.111 17.16 0.00 40.87 4.51
3547 7398 2.124151 GTGGGCAGTGGCTATGGG 60.124 66.667 17.16 0.00 40.87 4.00
3548 7399 2.124151 GGTGGGCAGTGGCTATGG 60.124 66.667 17.16 0.00 40.87 2.74
3549 7400 0.323725 AAAGGTGGGCAGTGGCTATG 60.324 55.000 17.16 0.00 40.87 2.23
3550 7401 0.034089 GAAAGGTGGGCAGTGGCTAT 60.034 55.000 17.16 0.00 40.87 2.97
3551 7402 1.133809 AGAAAGGTGGGCAGTGGCTA 61.134 55.000 17.16 7.82 40.87 3.93
3552 7403 2.011617 AAGAAAGGTGGGCAGTGGCT 62.012 55.000 17.16 0.00 40.87 4.75
3553 7404 1.527433 GAAGAAAGGTGGGCAGTGGC 61.527 60.000 8.47 8.47 40.13 5.01
3554 7405 0.895559 GGAAGAAAGGTGGGCAGTGG 60.896 60.000 0.00 0.00 0.00 4.00
3555 7406 0.895559 GGGAAGAAAGGTGGGCAGTG 60.896 60.000 0.00 0.00 0.00 3.66
3556 7407 1.068352 AGGGAAGAAAGGTGGGCAGT 61.068 55.000 0.00 0.00 0.00 4.40
3557 7408 0.991920 TAGGGAAGAAAGGTGGGCAG 59.008 55.000 0.00 0.00 0.00 4.85
3558 7409 0.696501 GTAGGGAAGAAAGGTGGGCA 59.303 55.000 0.00 0.00 0.00 5.36
3559 7410 0.992695 AGTAGGGAAGAAAGGTGGGC 59.007 55.000 0.00 0.00 0.00 5.36
3560 7411 1.340114 GCAGTAGGGAAGAAAGGTGGG 60.340 57.143 0.00 0.00 0.00 4.61
3561 7412 1.340114 GGCAGTAGGGAAGAAAGGTGG 60.340 57.143 0.00 0.00 0.00 4.61
3562 7413 1.630878 AGGCAGTAGGGAAGAAAGGTG 59.369 52.381 0.00 0.00 0.00 4.00
3563 7414 1.909986 GAGGCAGTAGGGAAGAAAGGT 59.090 52.381 0.00 0.00 0.00 3.50
3564 7415 1.909302 TGAGGCAGTAGGGAAGAAAGG 59.091 52.381 0.00 0.00 0.00 3.11
3565 7416 2.355209 GGTGAGGCAGTAGGGAAGAAAG 60.355 54.545 0.00 0.00 0.00 2.62
3566 7417 1.628846 GGTGAGGCAGTAGGGAAGAAA 59.371 52.381 0.00 0.00 0.00 2.52
3567 7418 1.276622 GGTGAGGCAGTAGGGAAGAA 58.723 55.000 0.00 0.00 0.00 2.52
3568 7419 0.116342 TGGTGAGGCAGTAGGGAAGA 59.884 55.000 0.00 0.00 0.00 2.87
3569 7420 0.250513 GTGGTGAGGCAGTAGGGAAG 59.749 60.000 0.00 0.00 0.00 3.46
3570 7421 1.198759 GGTGGTGAGGCAGTAGGGAA 61.199 60.000 0.00 0.00 0.00 3.97
3571 7422 1.612442 GGTGGTGAGGCAGTAGGGA 60.612 63.158 0.00 0.00 0.00 4.20
3572 7423 2.990479 GGTGGTGAGGCAGTAGGG 59.010 66.667 0.00 0.00 0.00 3.53
3573 7424 2.579201 CGGTGGTGAGGCAGTAGG 59.421 66.667 0.00 0.00 0.00 3.18
3574 7425 2.579201 CCGGTGGTGAGGCAGTAG 59.421 66.667 0.00 0.00 0.00 2.57
3592 7443 4.228097 CTGAAATCGCAGCCGCCG 62.228 66.667 0.00 0.00 33.11 6.46
3593 7444 2.110734 GATCTGAAATCGCAGCCGCC 62.111 60.000 0.00 0.00 35.86 6.13
3594 7445 1.156645 AGATCTGAAATCGCAGCCGC 61.157 55.000 0.00 0.00 35.86 6.53
3595 7446 0.580578 CAGATCTGAAATCGCAGCCG 59.419 55.000 18.34 0.00 35.86 5.52
3596 7447 1.329906 CACAGATCTGAAATCGCAGCC 59.670 52.381 29.27 0.00 35.86 4.85
3597 7448 1.267932 GCACAGATCTGAAATCGCAGC 60.268 52.381 29.27 14.02 35.86 5.25
3598 7449 2.277969 AGCACAGATCTGAAATCGCAG 58.722 47.619 29.27 8.77 37.24 5.18
3599 7450 2.391616 AGCACAGATCTGAAATCGCA 57.608 45.000 29.27 0.00 0.00 5.10
3600 7451 4.624882 CCTATAGCACAGATCTGAAATCGC 59.375 45.833 29.27 19.99 0.00 4.58
3601 7452 4.624882 GCCTATAGCACAGATCTGAAATCG 59.375 45.833 29.27 12.07 42.97 3.34
3602 7453 4.624882 CGCCTATAGCACAGATCTGAAATC 59.375 45.833 29.27 13.57 44.04 2.17
3603 7454 4.562347 CCGCCTATAGCACAGATCTGAAAT 60.562 45.833 29.27 16.70 44.04 2.17
3604 7455 3.243873 CCGCCTATAGCACAGATCTGAAA 60.244 47.826 29.27 11.06 44.04 2.69
3605 7456 2.297315 CCGCCTATAGCACAGATCTGAA 59.703 50.000 29.27 11.40 44.04 3.02
3606 7457 1.889170 CCGCCTATAGCACAGATCTGA 59.111 52.381 29.27 7.03 44.04 3.27
3607 7458 1.671261 GCCGCCTATAGCACAGATCTG 60.671 57.143 21.37 21.37 44.04 2.90
3608 7459 0.605589 GCCGCCTATAGCACAGATCT 59.394 55.000 0.00 0.00 44.04 2.75
3609 7460 0.734253 CGCCGCCTATAGCACAGATC 60.734 60.000 0.00 0.00 44.04 2.75
3610 7461 1.290324 CGCCGCCTATAGCACAGAT 59.710 57.895 0.00 0.00 44.04 2.90
3611 7462 2.728180 CGCCGCCTATAGCACAGA 59.272 61.111 0.00 0.00 44.04 3.41
3612 7463 2.356313 CCGCCGCCTATAGCACAG 60.356 66.667 0.00 0.00 44.04 3.66
3613 7464 4.602259 GCCGCCGCCTATAGCACA 62.602 66.667 0.00 0.00 44.04 4.57
3635 7486 3.134127 AAATGCCGCCGCCTCTTC 61.134 61.111 0.00 0.00 0.00 2.87
3636 7487 3.443045 CAAATGCCGCCGCCTCTT 61.443 61.111 0.00 0.00 0.00 2.85
3644 7495 4.197498 ATCCGCTGCAAATGCCGC 62.197 61.111 11.20 11.20 45.81 6.53
3645 7496 2.025156 GATCCGCTGCAAATGCCG 59.975 61.111 2.46 0.00 41.18 5.69
3646 7497 1.065273 CAGATCCGCTGCAAATGCC 59.935 57.895 2.46 0.00 41.18 4.40
3647 7498 1.065273 CCAGATCCGCTGCAAATGC 59.935 57.895 0.00 0.00 43.50 3.56
3648 7499 0.099968 CACCAGATCCGCTGCAAATG 59.900 55.000 0.00 0.00 43.50 2.32
3649 7500 1.660560 GCACCAGATCCGCTGCAAAT 61.661 55.000 0.00 0.00 43.50 2.32
3650 7501 2.334946 GCACCAGATCCGCTGCAAA 61.335 57.895 0.00 0.00 43.50 3.68
3651 7502 2.747460 GCACCAGATCCGCTGCAA 60.747 61.111 0.00 0.00 43.50 4.08
3652 7503 3.709633 AGCACCAGATCCGCTGCA 61.710 61.111 0.00 0.00 43.50 4.41
3653 7504 3.200593 CAGCACCAGATCCGCTGC 61.201 66.667 10.07 4.91 45.85 5.25
3655 7506 4.479993 GGCAGCACCAGATCCGCT 62.480 66.667 0.00 0.00 38.86 5.52
3657 7508 3.335356 AAGGGCAGCACCAGATCCG 62.335 63.158 0.00 0.00 42.05 4.18
3658 7509 1.751927 CAAGGGCAGCACCAGATCC 60.752 63.158 0.00 0.00 42.05 3.36
3659 7510 2.413142 GCAAGGGCAGCACCAGATC 61.413 63.158 0.00 0.00 42.05 2.75
3660 7511 2.362120 GCAAGGGCAGCACCAGAT 60.362 61.111 0.00 0.00 42.05 2.90
3661 7512 3.573229 AGCAAGGGCAGCACCAGA 61.573 61.111 0.00 0.00 44.61 3.86
3662 7513 3.371063 CAGCAAGGGCAGCACCAG 61.371 66.667 0.00 0.00 44.61 4.00
3663 7514 3.736996 AACAGCAAGGGCAGCACCA 62.737 57.895 0.00 0.00 44.61 4.17
3664 7515 2.914097 AACAGCAAGGGCAGCACC 60.914 61.111 0.00 0.00 44.61 5.01
3665 7516 2.337532 CAACAGCAAGGGCAGCAC 59.662 61.111 0.00 0.00 44.61 4.40
3666 7517 2.913578 CCAACAGCAAGGGCAGCA 60.914 61.111 0.00 0.00 44.61 4.41
3667 7518 4.368543 GCCAACAGCAAGGGCAGC 62.369 66.667 0.00 0.00 46.92 5.25
3671 7522 2.703798 CGATGGCCAACAGCAAGGG 61.704 63.158 10.96 0.00 46.50 3.95
3672 7523 1.926511 GACGATGGCCAACAGCAAGG 61.927 60.000 10.96 0.00 46.50 3.61
3673 7524 0.957395 AGACGATGGCCAACAGCAAG 60.957 55.000 10.96 0.00 46.50 4.01
3674 7525 1.073025 AGACGATGGCCAACAGCAA 59.927 52.632 10.96 0.00 46.50 3.91
3675 7526 1.672030 CAGACGATGGCCAACAGCA 60.672 57.895 10.96 0.00 46.50 4.41
3676 7527 2.401766 CCAGACGATGGCCAACAGC 61.402 63.158 10.96 1.01 43.83 4.40
3677 7528 3.895025 CCAGACGATGGCCAACAG 58.105 61.111 10.96 6.74 43.83 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.