Multiple sequence alignment - TraesCS4D01G346500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G346500 chr4D 100.000 6454 0 0 1 6454 500390094 500396547 0.000000e+00 11919.0
1 TraesCS4D01G346500 chr4D 99.666 299 1 0 6156 6454 199214433 199214731 1.220000e-151 547.0
2 TraesCS4D01G346500 chr4D 96.364 110 4 0 2052 2161 500391674 500391565 1.430000e-41 182.0
3 TraesCS4D01G346500 chr4D 97.196 107 3 0 1475 1581 500392251 500392145 1.430000e-41 182.0
4 TraesCS4D01G346500 chr4D 91.129 124 10 1 2046 2168 60634346 60634469 4.000000e-37 167.0
5 TraesCS4D01G346500 chr4D 77.778 171 24 9 5840 6008 16648160 16648002 6.890000e-15 93.5
6 TraesCS4D01G346500 chr4B 95.452 3408 120 13 2767 6155 643665182 643668573 0.000000e+00 5402.0
7 TraesCS4D01G346500 chr4B 90.603 1990 112 26 3180 5148 643764542 643766477 0.000000e+00 2569.0
8 TraesCS4D01G346500 chr4B 93.206 1310 52 17 194 1473 643661879 643663181 0.000000e+00 1892.0
9 TraesCS4D01G346500 chr4B 89.938 487 38 7 2157 2641 643663717 643664194 9.190000e-173 617.0
10 TraesCS4D01G346500 chr4B 87.474 479 35 12 997 1454 643762680 643763154 4.430000e-146 529.0
11 TraesCS4D01G346500 chr4B 93.235 340 18 5 1716 2053 643663382 643663718 4.490000e-136 496.0
12 TraesCS4D01G346500 chr4B 82.425 569 68 19 5201 5744 643766574 643767135 9.800000e-128 468.0
13 TraesCS4D01G346500 chr4B 89.189 296 22 6 2169 2456 643763732 643764025 1.710000e-95 361.0
14 TraesCS4D01G346500 chr4B 90.643 171 10 3 2863 3030 643764016 643764183 8.420000e-54 222.0
15 TraesCS4D01G346500 chr4B 93.750 112 7 0 20 131 643661401 643661512 1.110000e-37 169.0
16 TraesCS4D01G346500 chr5A 96.050 2987 105 10 3175 6156 681135191 681138169 0.000000e+00 4850.0
17 TraesCS4D01G346500 chr5A 95.142 2985 115 15 3179 6156 681205559 681208520 0.000000e+00 4682.0
18 TraesCS4D01G346500 chr5A 96.084 1660 59 4 3777 5436 681090338 681091991 0.000000e+00 2700.0
19 TraesCS4D01G346500 chr5A 96.024 1660 59 4 3777 5436 681162655 681164307 0.000000e+00 2693.0
20 TraesCS4D01G346500 chr5A 95.274 1439 67 1 4718 6156 681255570 681257007 0.000000e+00 2279.0
21 TraesCS4D01G346500 chr5A 92.143 1311 61 17 191 1476 681063503 681064796 0.000000e+00 1812.0
22 TraesCS4D01G346500 chr5A 92.438 1243 51 15 262 1476 681202185 681203412 0.000000e+00 1735.0
23 TraesCS4D01G346500 chr5A 92.351 1242 53 16 262 1476 681131371 681132597 0.000000e+00 1729.0
24 TraesCS4D01G346500 chr5A 95.825 982 29 6 2767 3748 681084210 681085179 0.000000e+00 1576.0
25 TraesCS4D01G346500 chr5A 95.825 982 29 6 2767 3748 681156529 681157498 0.000000e+00 1576.0
26 TraesCS4D01G346500 chr5A 92.238 1108 70 10 3619 4726 681254301 681255392 0.000000e+00 1555.0
27 TraesCS4D01G346500 chr5A 93.397 1045 59 8 5117 6156 681065638 681066677 0.000000e+00 1539.0
28 TraesCS4D01G346500 chr5A 93.204 618 34 8 2157 2771 681155416 681156028 0.000000e+00 902.0
29 TraesCS4D01G346500 chr5A 93.031 617 36 7 2157 2771 681083098 681083709 0.000000e+00 894.0
30 TraesCS4D01G346500 chr5A 91.545 615 30 6 2155 2767 681203942 681204536 0.000000e+00 828.0
31 TraesCS4D01G346500 chr5A 86.745 596 46 14 997 1581 681241885 681242458 3.280000e-177 632.0
32 TraesCS4D01G346500 chr5A 90.931 419 24 7 2767 3176 681205041 681205454 9.460000e-153 551.0
33 TraesCS4D01G346500 chr5A 94.100 339 16 3 1716 2053 681155082 681155417 4.460000e-141 512.0
34 TraesCS4D01G346500 chr5A 93.805 339 17 3 1716 2053 681082764 681083099 2.080000e-139 507.0
35 TraesCS4D01G346500 chr5A 93.175 337 18 4 1716 2050 681064993 681065326 2.090000e-134 490.0
36 TraesCS4D01G346500 chr5A 93.175 337 18 4 1716 2050 681132844 681133177 2.090000e-134 490.0
37 TraesCS4D01G346500 chr5A 93.175 337 18 4 1716 2050 681203609 681203942 2.090000e-134 490.0
38 TraesCS4D01G346500 chr5A 94.481 308 9 3 2155 2460 681065326 681065627 9.800000e-128 468.0
39 TraesCS4D01G346500 chr5A 94.481 308 9 3 2155 2460 681133177 681133478 9.800000e-128 468.0
40 TraesCS4D01G346500 chr5A 93.141 277 10 2 3180 3454 681248250 681248519 1.300000e-106 398.0
41 TraesCS4D01G346500 chr5A 93.182 264 14 3 1716 1978 681154254 681154514 1.020000e-102 385.0
42 TraesCS4D01G346500 chr5A 90.345 290 26 1 5869 6156 681164304 681164593 4.720000e-101 379.0
43 TraesCS4D01G346500 chr5A 88.966 290 28 2 5869 6156 681091988 681092275 7.960000e-94 355.0
44 TraesCS4D01G346500 chr5A 87.797 295 23 4 2891 3176 681134796 681135086 3.730000e-87 333.0
45 TraesCS4D01G346500 chr5A 86.824 296 27 7 2169 2456 681247443 681247734 2.900000e-83 320.0
46 TraesCS4D01G346500 chr5A 94.845 194 9 1 1 194 681062581 681062773 1.050000e-77 302.0
47 TraesCS4D01G346500 chr5A 94.330 194 10 1 1 194 681190598 681190790 4.890000e-76 296.0
48 TraesCS4D01G346500 chr5A 93.814 194 11 1 1 194 681119755 681119947 2.280000e-74 291.0
49 TraesCS4D01G346500 chr5A 91.489 188 16 0 2580 2767 681133915 681134102 6.420000e-65 259.0
50 TraesCS4D01G346500 chr5A 99.286 140 1 0 1579 1718 681203410 681203549 2.990000e-63 254.0
51 TraesCS4D01G346500 chr5A 97.857 140 3 0 1579 1718 681064794 681064933 6.470000e-60 243.0
52 TraesCS4D01G346500 chr5A 97.794 136 3 0 1583 1718 681082569 681082704 1.080000e-57 235.0
53 TraesCS4D01G346500 chr5A 97.794 136 3 0 1583 1718 681154059 681154194 1.080000e-57 235.0
54 TraesCS4D01G346500 chr5A 97.794 136 3 0 1583 1718 681154887 681155022 1.080000e-57 235.0
55 TraesCS4D01G346500 chr5A 100.000 96 0 0 1579 1674 681132595 681132690 1.850000e-40 178.0
56 TraesCS4D01G346500 chr5A 94.898 98 5 0 1376 1473 681082472 681082569 3.120000e-33 154.0
57 TraesCS4D01G346500 chr5A 94.898 98 5 0 1376 1473 681153962 681154059 3.120000e-33 154.0
58 TraesCS4D01G346500 chr5A 94.898 98 5 0 1376 1473 681154790 681154887 3.120000e-33 154.0
59 TraesCS4D01G346500 chr5A 94.048 84 5 0 191 274 681191634 681191717 1.890000e-25 128.0
60 TraesCS4D01G346500 chr5A 92.857 84 6 0 191 274 681120791 681120874 8.790000e-24 122.0
61 TraesCS4D01G346500 chr5A 94.118 68 4 0 1316 1383 681081418 681081485 3.180000e-18 104.0
62 TraesCS4D01G346500 chr5A 90.909 77 7 0 3029 3105 681135016 681134940 3.180000e-18 104.0
63 TraesCS4D01G346500 chr5A 79.646 113 12 8 587 690 681236472 681236582 3.230000e-08 71.3
64 TraesCS4D01G346500 chrUn 97.275 1945 46 4 3175 5115 321512134 321514075 0.000000e+00 3291.0
65 TraesCS4D01G346500 chrUn 91.545 615 29 7 2155 2767 398014263 398014856 0.000000e+00 826.0
66 TraesCS4D01G346500 chrUn 93.175 337 18 4 1716 2050 398013930 398014263 2.090000e-134 490.0
67 TraesCS4D01G346500 chrUn 89.226 297 19 3 2889 3176 321511737 321512029 6.150000e-95 359.0
68 TraesCS4D01G346500 chrUn 91.489 188 16 0 2580 2767 321510882 321511069 6.420000e-65 259.0
69 TraesCS4D01G346500 chrUn 89.610 77 8 0 3029 3105 321511959 321511883 1.480000e-16 99.0
70 TraesCS4D01G346500 chrUn 94.340 53 2 1 1242 1293 101887423 101887475 5.360000e-11 80.5
71 TraesCS4D01G346500 chr1D 100.000 299 0 0 6156 6454 131297233 131296935 2.630000e-153 553.0
72 TraesCS4D01G346500 chr1D 99.664 298 1 0 6157 6454 62834964 62834667 4.400000e-151 545.0
73 TraesCS4D01G346500 chr1D 95.495 111 4 1 2048 2158 411310685 411310794 6.650000e-40 176.0
74 TraesCS4D01G346500 chr5D 100.000 297 0 0 6156 6452 390004566 390004270 3.400000e-152 549.0
75 TraesCS4D01G346500 chr5D 84.091 220 30 2 2535 2754 432936626 432936840 2.360000e-49 207.0
76 TraesCS4D01G346500 chr2D 99.667 300 1 0 6155 6454 24367759 24367460 3.400000e-152 549.0
77 TraesCS4D01G346500 chr2D 99.666 299 1 0 6156 6454 250655016 250655314 1.220000e-151 547.0
78 TraesCS4D01G346500 chr2D 87.500 176 21 1 2596 2771 577751050 577750876 1.100000e-47 202.0
79 TraesCS4D01G346500 chr2D 97.872 47 1 0 2823 2869 640310663 640310709 1.490000e-11 82.4
80 TraesCS4D01G346500 chr7D 99.664 298 1 0 6155 6452 173009398 173009695 4.400000e-151 545.0
81 TraesCS4D01G346500 chr7D 93.860 114 7 0 1475 1588 577826134 577826247 8.600000e-39 172.0
82 TraesCS4D01G346500 chr7D 93.860 114 6 1 2049 2161 227507230 227507117 3.090000e-38 171.0
83 TraesCS4D01G346500 chr7D 85.714 147 17 4 1474 1618 364631128 364631272 1.120000e-32 152.0
84 TraesCS4D01G346500 chr3D 99.664 298 1 0 6157 6454 164011263 164010966 4.400000e-151 545.0
85 TraesCS4D01G346500 chr3D 93.860 114 7 0 1468 1581 208707608 208707495 8.600000e-39 172.0
86 TraesCS4D01G346500 chr6D 99.331 299 2 0 6156 6454 111016001 111015703 5.690000e-150 542.0
87 TraesCS4D01G346500 chr1B 86.932 176 22 1 2596 2771 673451876 673451702 5.110000e-46 196.0
88 TraesCS4D01G346500 chr1B 82.877 146 21 4 6012 6156 363663239 363663381 1.890000e-25 128.0
89 TraesCS4D01G346500 chr6A 96.296 108 4 0 2051 2158 436115578 436115471 1.850000e-40 178.0
90 TraesCS4D01G346500 chr6A 92.000 125 8 1 1468 1590 436115464 436115588 2.390000e-39 174.0
91 TraesCS4D01G346500 chr6A 95.327 107 5 0 2052 2158 596351421 596351527 3.090000e-38 171.0
92 TraesCS4D01G346500 chr6A 94.340 53 2 1 1242 1293 34179544 34179596 5.360000e-11 80.5
93 TraesCS4D01G346500 chr7A 94.690 113 6 0 2048 2160 645026055 645026167 6.650000e-40 176.0
94 TraesCS4D01G346500 chr7A 83.761 117 14 3 2534 2650 461801502 461801613 8.850000e-19 106.0
95 TraesCS4D01G346500 chr5B 94.737 114 5 1 2046 2158 677288621 677288734 6.650000e-40 176.0
96 TraesCS4D01G346500 chr5B 91.667 120 10 0 1463 1582 58695245 58695126 4.000000e-37 167.0
97 TraesCS4D01G346500 chr5B 87.500 112 11 3 1505 1614 571209342 571209232 6.790000e-25 126.0
98 TraesCS4D01G346500 chr5B 93.333 45 3 0 2816 2860 136610467 136610511 4.180000e-07 67.6
99 TraesCS4D01G346500 chr3B 95.495 111 4 1 2048 2158 750136215 750136324 6.650000e-40 176.0
100 TraesCS4D01G346500 chr6B 93.913 115 7 0 1469 1583 576425965 576425851 2.390000e-39 174.0
101 TraesCS4D01G346500 chr6B 91.803 122 8 2 1465 1584 41981083 41980962 1.110000e-37 169.0
102 TraesCS4D01G346500 chr6B 91.228 57 3 2 1237 1293 62403539 62403485 6.940000e-10 76.8
103 TraesCS4D01G346500 chr3A 91.129 124 11 0 1462 1585 583676578 583676701 1.110000e-37 169.0
104 TraesCS4D01G346500 chr2B 91.803 122 8 2 1471 1592 494265526 494265407 1.110000e-37 169.0
105 TraesCS4D01G346500 chr7B 81.208 149 23 5 6011 6156 550445045 550444899 1.470000e-21 115.0
106 TraesCS4D01G346500 chr7B 100.000 47 0 0 2823 2869 174044425 174044471 3.210000e-13 87.9
107 TraesCS4D01G346500 chr7B 84.211 76 9 2 3030 3105 934647 934719 3.230000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G346500 chr4D 500390094 500396547 6453 False 11919.000000 11919 100.000000 1 6454 1 chr4D.!!$F3 6453
1 TraesCS4D01G346500 chr4B 643661401 643668573 7172 False 1715.200000 5402 93.116200 20 6155 5 chr4B.!!$F1 6135
2 TraesCS4D01G346500 chr4B 643762680 643767135 4455 False 829.800000 2569 88.066800 997 5744 5 chr4B.!!$F2 4747
3 TraesCS4D01G346500 chr5A 681254301 681257007 2706 False 1917.000000 2279 93.756000 3619 6156 2 chr5A.!!$F13 2537
4 TraesCS4D01G346500 chr5A 681162655 681164593 1938 False 1536.000000 2693 93.184500 3777 6156 2 chr5A.!!$F9 2379
5 TraesCS4D01G346500 chr5A 681090338 681092275 1937 False 1527.500000 2700 92.525000 3777 6156 2 chr5A.!!$F5 2379
6 TraesCS4D01G346500 chr5A 681202185 681208520 6335 False 1423.333333 4682 93.752833 262 6156 6 chr5A.!!$F11 5894
7 TraesCS4D01G346500 chr5A 681131371 681138169 6798 False 1186.714286 4850 93.620429 262 6156 7 chr5A.!!$F7 5894
8 TraesCS4D01G346500 chr5A 681062581 681066677 4096 False 809.000000 1812 94.316333 1 6156 6 chr5A.!!$F3 6155
9 TraesCS4D01G346500 chr5A 681241885 681242458 573 False 632.000000 632 86.745000 997 1581 1 chr5A.!!$F2 584
10 TraesCS4D01G346500 chr5A 681081418 681085179 3761 False 578.333333 1576 94.911833 1316 3748 6 chr5A.!!$F4 2432
11 TraesCS4D01G346500 chr5A 681153962 681157498 3536 False 519.125000 1576 95.211875 1376 3748 8 chr5A.!!$F8 2372
12 TraesCS4D01G346500 chr5A 681247443 681248519 1076 False 359.000000 398 89.982500 2169 3454 2 chr5A.!!$F12 1285
13 TraesCS4D01G346500 chr5A 681190598 681191717 1119 False 212.000000 296 94.189000 1 274 2 chr5A.!!$F10 273
14 TraesCS4D01G346500 chr5A 681119755 681120874 1119 False 206.500000 291 93.335500 1 274 2 chr5A.!!$F6 273
15 TraesCS4D01G346500 chrUn 321510882 321514075 3193 False 1303.000000 3291 92.663333 2580 5115 3 chrUn.!!$F2 2535
16 TraesCS4D01G346500 chrUn 398013930 398014856 926 False 658.000000 826 92.360000 1716 2767 2 chrUn.!!$F3 1051

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
300 1149 1.816863 AAGAGAAGAGGCGCGACCAA 61.817 55.000 9.25 0.00 43.14 3.67 F
1714 3682 0.183014 TTGGCGGTGGGAACTGTAAA 59.817 50.000 0.00 0.00 0.00 2.01 F
2067 4171 0.038744 AACTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55 F
2827 6156 0.321564 CAAACGGACCTCTGGCATCA 60.322 55.000 0.00 0.00 0.00 3.07 F
2956 6360 1.129437 GCTCACGATGTCTTTGGAAGC 59.871 52.381 0.00 0.00 0.00 3.86 F
3602 7423 2.181021 GGGCTCGACGAACGTGAT 59.819 61.111 4.19 0.00 43.13 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2049 4153 0.038744 TTCCGAACGGAGGGAGTAGT 59.961 55.000 15.34 0.0 46.06 2.73 R
3690 7511 1.032014 GCAAGGTCCAAGCAAGTGAA 58.968 50.000 0.00 0.0 0.00 3.18 R
4074 7897 4.156739 GGAATTGTGAATCTGGAAGGTGAC 59.843 45.833 0.00 0.0 0.00 3.67 R
4119 7942 0.977627 ATCCTGGCGATGTGTCTCCA 60.978 55.000 0.00 0.0 36.90 3.86 R
4233 8065 4.526438 ATGGCCCCAATATTCCTATAGC 57.474 45.455 0.00 0.0 0.00 2.97 R
5531 9623 3.213506 TGGTTGAGGACATCACAAACTG 58.786 45.455 0.00 0.0 37.77 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 6.972328 GTGCATGGCGAAATAAGATTTAAGAA 59.028 34.615 0.00 0.00 0.00 2.52
108 109 9.574516 ACATCTTTTGTTGAGGATAACTAACTT 57.425 29.630 0.00 0.00 33.74 2.66
155 156 6.528537 TGTGAAAACTATGGATCCCAAATG 57.471 37.500 9.90 0.00 36.95 2.32
218 1067 5.449314 CGAGGAACATACAACCAACAAACAA 60.449 40.000 0.00 0.00 0.00 2.83
237 1086 3.258372 ACAAGACATTGAAGAGAGCGGTA 59.742 43.478 0.00 0.00 38.83 4.02
300 1149 1.816863 AAGAGAAGAGGCGCGACCAA 61.817 55.000 9.25 0.00 43.14 3.67
638 1508 8.704668 AGACAACAAAAAGGTGGAAATAGAAAT 58.295 29.630 0.00 0.00 40.07 2.17
676 1549 8.712285 AAAGAAAAGGTAAAACAAACTAAGCC 57.288 30.769 0.00 0.00 0.00 4.35
1195 2086 0.914551 CATCTTTGAGCCGTACGTCG 59.085 55.000 15.21 0.29 39.52 5.12
1206 2097 0.368227 CGTACGTCGTCGCTACTCTT 59.632 55.000 7.22 0.00 41.18 2.85
1362 2270 7.148967 CGATTATATTCATGACGTGACGTGATT 60.149 37.037 18.09 6.05 41.37 2.57
1501 3412 6.601332 TCCCTCTGTTTGAAATTACTTGTCT 58.399 36.000 0.00 0.00 0.00 3.41
1503 3414 6.347725 CCCTCTGTTTGAAATTACTTGTCTCG 60.348 42.308 0.00 0.00 0.00 4.04
1520 3431 7.923344 ACTTGTCTCGAAAATGGATGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
1573 3484 1.811965 TGACGAGTAATTCCGAACGGA 59.188 47.619 12.04 12.04 43.52 4.69
1574 3485 2.159476 TGACGAGTAATTCCGAACGGAG 60.159 50.000 15.34 5.60 46.06 4.63
1576 3487 1.535437 CGAGTAATTCCGAACGGAGGG 60.535 57.143 15.34 0.00 46.06 4.30
1577 3488 1.753073 GAGTAATTCCGAACGGAGGGA 59.247 52.381 15.34 2.49 46.06 4.20
1714 3682 0.183014 TTGGCGGTGGGAACTGTAAA 59.817 50.000 0.00 0.00 0.00 2.01
1775 3826 3.657610 AGTATGGAGGGTCATCACATCA 58.342 45.455 0.00 0.00 0.00 3.07
1776 3827 3.389329 AGTATGGAGGGTCATCACATCAC 59.611 47.826 0.00 0.00 0.00 3.06
1813 3864 0.389757 GTAGTGGCTACTGGCTAGGC 59.610 60.000 13.76 9.85 46.30 3.93
1936 4040 3.544684 TCGGATGTCATTTGGGAATCAG 58.455 45.455 0.00 0.00 0.00 2.90
1958 4062 6.426937 TCAGACTTTGCAAAGACCTATAACAC 59.573 38.462 38.78 17.92 39.31 3.32
2049 4153 8.931905 ACGAAAATTACGCTCGTAAATTAAAA 57.068 26.923 17.16 0.00 43.57 1.52
2050 4154 8.830428 ACGAAAATTACGCTCGTAAATTAAAAC 58.170 29.630 17.16 8.31 43.57 2.43
2051 4155 9.043678 CGAAAATTACGCTCGTAAATTAAAACT 57.956 29.630 17.16 2.31 42.82 2.66
2056 4160 6.638168 ACGCTCGTAAATTAAAACTACTCC 57.362 37.500 0.00 0.00 0.00 3.85
2057 4161 5.578336 ACGCTCGTAAATTAAAACTACTCCC 59.422 40.000 0.00 0.00 0.00 4.30
2058 4162 5.809051 CGCTCGTAAATTAAAACTACTCCCT 59.191 40.000 0.00 0.00 0.00 4.20
2059 4163 6.020041 CGCTCGTAAATTAAAACTACTCCCTC 60.020 42.308 0.00 0.00 0.00 4.30
2060 4164 6.257411 GCTCGTAAATTAAAACTACTCCCTCC 59.743 42.308 0.00 0.00 0.00 4.30
2061 4165 6.332630 TCGTAAATTAAAACTACTCCCTCCG 58.667 40.000 0.00 0.00 0.00 4.63
2062 4166 6.071391 TCGTAAATTAAAACTACTCCCTCCGT 60.071 38.462 0.00 0.00 0.00 4.69
2063 4167 6.591448 CGTAAATTAAAACTACTCCCTCCGTT 59.409 38.462 0.00 0.00 0.00 4.44
2064 4168 7.201470 CGTAAATTAAAACTACTCCCTCCGTTC 60.201 40.741 0.00 0.00 0.00 3.95
2065 4169 2.738013 AAAACTACTCCCTCCGTTCG 57.262 50.000 0.00 0.00 0.00 3.95
2066 4170 0.893447 AAACTACTCCCTCCGTTCGG 59.107 55.000 4.74 4.74 0.00 4.30
2067 4171 0.038744 AACTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
2068 4172 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
2069 4173 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
2070 4174 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
2071 4175 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
2072 4176 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
2073 4177 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
2074 4178 1.753073 TCCCTCCGTTCGGAATTACTC 59.247 52.381 14.79 0.00 33.41 2.59
2075 4179 1.535437 CCCTCCGTTCGGAATTACTCG 60.535 57.143 14.79 1.97 33.41 4.18
2076 4180 1.133790 CCTCCGTTCGGAATTACTCGT 59.866 52.381 14.79 0.00 33.41 4.18
2077 4181 2.448219 CTCCGTTCGGAATTACTCGTC 58.552 52.381 14.79 0.00 33.41 4.20
2078 4182 1.811965 TCCGTTCGGAATTACTCGTCA 59.188 47.619 11.66 0.00 0.00 4.35
2079 4183 1.916000 CCGTTCGGAATTACTCGTCAC 59.084 52.381 5.19 0.00 0.00 3.67
2080 4184 2.587956 CGTTCGGAATTACTCGTCACA 58.412 47.619 0.00 0.00 0.00 3.58
2081 4185 2.592897 CGTTCGGAATTACTCGTCACAG 59.407 50.000 0.00 0.00 0.00 3.66
2082 4186 3.668757 CGTTCGGAATTACTCGTCACAGA 60.669 47.826 0.00 0.00 0.00 3.41
2083 4187 4.232221 GTTCGGAATTACTCGTCACAGAA 58.768 43.478 0.00 0.00 0.00 3.02
2084 4188 4.508461 TCGGAATTACTCGTCACAGAAA 57.492 40.909 0.00 0.00 0.00 2.52
2085 4189 5.068234 TCGGAATTACTCGTCACAGAAAT 57.932 39.130 0.00 0.00 0.00 2.17
2086 4190 6.198650 TCGGAATTACTCGTCACAGAAATA 57.801 37.500 0.00 0.00 0.00 1.40
2087 4191 6.263344 TCGGAATTACTCGTCACAGAAATAG 58.737 40.000 0.00 0.00 0.00 1.73
2088 4192 6.094464 TCGGAATTACTCGTCACAGAAATAGA 59.906 38.462 0.00 0.00 0.00 1.98
2089 4193 6.918569 CGGAATTACTCGTCACAGAAATAGAT 59.081 38.462 0.00 0.00 0.00 1.98
2090 4194 7.096436 CGGAATTACTCGTCACAGAAATAGATG 60.096 40.741 0.00 0.00 0.00 2.90
2091 4195 7.707035 GGAATTACTCGTCACAGAAATAGATGT 59.293 37.037 0.00 0.00 0.00 3.06
2092 4196 9.731819 GAATTACTCGTCACAGAAATAGATGTA 57.268 33.333 0.00 0.00 0.00 2.29
2094 4198 9.900710 ATTACTCGTCACAGAAATAGATGTATC 57.099 33.333 0.00 0.00 0.00 2.24
2095 4199 7.575414 ACTCGTCACAGAAATAGATGTATCT 57.425 36.000 0.00 0.00 40.86 1.98
2096 4200 8.678593 ACTCGTCACAGAAATAGATGTATCTA 57.321 34.615 4.22 4.22 43.00 1.98
2097 4201 8.779303 ACTCGTCACAGAAATAGATGTATCTAG 58.221 37.037 7.57 0.00 42.20 2.43
2098 4202 8.904099 TCGTCACAGAAATAGATGTATCTAGA 57.096 34.615 7.57 0.00 42.20 2.43
2099 4203 8.775527 TCGTCACAGAAATAGATGTATCTAGAC 58.224 37.037 0.00 6.48 42.20 2.59
2100 4204 7.742525 CGTCACAGAAATAGATGTATCTAGACG 59.257 40.741 16.18 16.18 42.20 4.18
2101 4205 8.561212 GTCACAGAAATAGATGTATCTAGACGT 58.439 37.037 0.00 0.00 42.20 4.34
2102 4206 9.774413 TCACAGAAATAGATGTATCTAGACGTA 57.226 33.333 0.00 0.00 42.20 3.57
2131 4235 9.967346 TTAGTTCTAGATACATCCATTTTCGAG 57.033 33.333 0.00 0.00 0.00 4.04
2132 4236 8.239038 AGTTCTAGATACATCCATTTTCGAGA 57.761 34.615 0.00 0.00 0.00 4.04
2133 4237 8.138712 AGTTCTAGATACATCCATTTTCGAGAC 58.861 37.037 0.00 0.00 0.00 3.36
2134 4238 7.582667 TCTAGATACATCCATTTTCGAGACA 57.417 36.000 0.00 0.00 0.00 3.41
2135 4239 8.007405 TCTAGATACATCCATTTTCGAGACAA 57.993 34.615 0.00 0.00 0.00 3.18
2136 4240 8.138074 TCTAGATACATCCATTTTCGAGACAAG 58.862 37.037 0.00 0.00 0.00 3.16
2137 4241 6.644347 AGATACATCCATTTTCGAGACAAGT 58.356 36.000 0.00 0.00 0.00 3.16
2138 4242 7.782049 AGATACATCCATTTTCGAGACAAGTA 58.218 34.615 0.00 0.00 0.00 2.24
2139 4243 8.258007 AGATACATCCATTTTCGAGACAAGTAA 58.742 33.333 0.00 0.00 0.00 2.24
2140 4244 8.964476 ATACATCCATTTTCGAGACAAGTAAT 57.036 30.769 0.00 0.00 0.00 1.89
2141 4245 7.687941 ACATCCATTTTCGAGACAAGTAATT 57.312 32.000 0.00 0.00 0.00 1.40
2142 4246 8.110860 ACATCCATTTTCGAGACAAGTAATTT 57.889 30.769 0.00 0.00 0.00 1.82
2143 4247 8.237267 ACATCCATTTTCGAGACAAGTAATTTC 58.763 33.333 0.00 0.00 0.00 2.17
2144 4248 7.737972 TCCATTTTCGAGACAAGTAATTTCA 57.262 32.000 0.00 0.00 0.00 2.69
2145 4249 8.160521 TCCATTTTCGAGACAAGTAATTTCAA 57.839 30.769 0.00 0.00 0.00 2.69
2146 4250 8.625651 TCCATTTTCGAGACAAGTAATTTCAAA 58.374 29.630 0.00 0.00 0.00 2.69
2147 4251 8.690840 CCATTTTCGAGACAAGTAATTTCAAAC 58.309 33.333 0.00 0.00 0.00 2.93
2148 4252 7.886191 TTTTCGAGACAAGTAATTTCAAACG 57.114 32.000 0.00 0.00 0.00 3.60
2149 4253 5.585500 TCGAGACAAGTAATTTCAAACGG 57.415 39.130 0.00 0.00 0.00 4.44
2150 4254 5.291178 TCGAGACAAGTAATTTCAAACGGA 58.709 37.500 0.00 0.00 0.00 4.69
2151 4255 5.404366 TCGAGACAAGTAATTTCAAACGGAG 59.596 40.000 0.00 0.00 0.00 4.63
2152 4256 5.389516 CGAGACAAGTAATTTCAAACGGAGG 60.390 44.000 0.00 0.00 0.00 4.30
2153 4257 4.760204 AGACAAGTAATTTCAAACGGAGGG 59.240 41.667 0.00 0.00 0.00 4.30
2287 4409 2.831685 TGTCTATGGCGTGTTTGTCT 57.168 45.000 0.00 0.00 0.00 3.41
2415 4544 1.135024 TGTAGGCGTGGGAATCGTAAC 60.135 52.381 0.00 0.00 0.00 2.50
2504 4636 3.625313 GCAAAGTCCAGCTATTTCTCTCC 59.375 47.826 0.00 0.00 0.00 3.71
2536 4668 2.507471 CCCAGGATCTCACTAGCCTTTT 59.493 50.000 0.00 0.00 0.00 2.27
2581 5028 7.710896 AGCTTTGCCTCATCTCATTAATAAAC 58.289 34.615 0.00 0.00 0.00 2.01
2587 5034 9.638239 TGCCTCATCTCATTAATAAACAAAAAC 57.362 29.630 0.00 0.00 0.00 2.43
2601 5048 5.871465 AACAAAAACGGAAACAAATTGCT 57.129 30.435 0.00 0.00 0.00 3.91
2602 5049 5.871465 ACAAAAACGGAAACAAATTGCTT 57.129 30.435 0.00 0.00 0.00 3.91
2702 5526 1.885850 GACCACACACACCACCGAC 60.886 63.158 0.00 0.00 0.00 4.79
2717 5541 3.948719 GACAAGGGGACACCGCCA 61.949 66.667 0.00 0.00 46.90 5.69
2792 6121 1.443702 CGCTCACCAACGTCATCGA 60.444 57.895 0.00 0.00 40.62 3.59
2810 6139 1.514678 GATGCCACACAAGCCGTCAA 61.515 55.000 0.00 0.00 0.00 3.18
2827 6156 0.321564 CAAACGGACCTCTGGCATCA 60.322 55.000 0.00 0.00 0.00 3.07
2887 6216 3.495806 GGGATCTCACTAGCCTTTCATGG 60.496 52.174 0.00 0.00 0.00 3.66
2956 6360 1.129437 GCTCACGATGTCTTTGGAAGC 59.871 52.381 0.00 0.00 0.00 3.86
3057 6461 5.536161 CCCTCCGATCCAAATTAATTGACAT 59.464 40.000 0.39 0.00 41.85 3.06
3093 6497 9.744468 ACTAAAGTTGTGTCAATTAATTTGGAC 57.256 29.630 10.34 10.34 35.92 4.02
3112 6516 3.574826 GGACTGGAGGGAGTACATGATAC 59.425 52.174 0.00 0.00 0.00 2.24
3131 6535 7.661536 TGATACAGGTTTAGCTCATTACTCT 57.338 36.000 0.00 0.00 0.00 3.24
3602 7423 2.181021 GGGCTCGACGAACGTGAT 59.819 61.111 4.19 0.00 43.13 3.06
3690 7511 2.752807 GGTGGTGGTGGACAGTGGT 61.753 63.158 0.00 0.00 0.00 4.16
4074 7897 6.365839 CACAAAGTAGTAGTGATTGTTGCTG 58.634 40.000 0.00 0.00 35.33 4.41
4146 7969 2.792947 ATCGCCAGGATACGCGGTT 61.793 57.895 12.47 0.00 44.99 4.44
4233 8065 6.130298 TGGAAATATAATCACAAACGCCTG 57.870 37.500 0.00 0.00 0.00 4.85
4235 8067 5.221048 GGAAATATAATCACAAACGCCTGCT 60.221 40.000 0.00 0.00 0.00 4.24
4236 8068 6.017440 GGAAATATAATCACAAACGCCTGCTA 60.017 38.462 0.00 0.00 0.00 3.49
4568 8421 6.677913 ACAAACATATAAGCAACAACTCACC 58.322 36.000 0.00 0.00 0.00 4.02
5783 9898 3.795688 TGCTTTTCCTCCTGTCTGAAT 57.204 42.857 0.00 0.00 0.00 2.57
5801 9916 3.899980 TGAATGGATCGAGATGGATCTGT 59.100 43.478 5.06 0.00 41.99 3.41
5811 9926 3.866582 GGATCTGTGAGGGGGCCG 61.867 72.222 0.00 0.00 0.00 6.13
5877 9992 2.227194 AGGGACCAAAGTAAAACGCAG 58.773 47.619 0.00 0.00 0.00 5.18
5905 10020 2.429610 GAGCTACGGTTAGGGACAATCA 59.570 50.000 0.00 0.00 0.00 2.57
5914 10029 0.400213 AGGGACAATCAAAGGCACGA 59.600 50.000 0.00 0.00 0.00 4.35
6086 10203 2.361610 CATTTGGGTCAGCCGCCT 60.362 61.111 0.00 0.00 34.97 5.52
6136 10253 1.968017 CAGTCGTGTGCCCAATGCT 60.968 57.895 0.00 0.00 42.00 3.79
6156 10273 1.754234 GCGGCCCATTTCATGTCCT 60.754 57.895 0.00 0.00 0.00 3.85
6157 10274 2.008268 GCGGCCCATTTCATGTCCTG 62.008 60.000 0.00 0.00 0.00 3.86
6158 10275 0.394216 CGGCCCATTTCATGTCCTGA 60.394 55.000 0.00 0.00 0.00 3.86
6159 10276 1.851304 GGCCCATTTCATGTCCTGAA 58.149 50.000 0.00 0.00 42.15 3.02
6160 10277 1.753073 GGCCCATTTCATGTCCTGAAG 59.247 52.381 0.00 0.00 44.48 3.02
6161 10278 1.753073 GCCCATTTCATGTCCTGAAGG 59.247 52.381 0.00 0.00 44.48 3.46
6162 10279 2.621407 GCCCATTTCATGTCCTGAAGGA 60.621 50.000 0.00 0.00 44.48 3.36
6174 10291 4.982241 TCCTGAAGGAAATATGCCCTAG 57.018 45.455 0.00 0.00 42.18 3.02
6175 10292 4.566837 TCCTGAAGGAAATATGCCCTAGA 58.433 43.478 0.00 0.00 42.18 2.43
6176 10293 4.594920 TCCTGAAGGAAATATGCCCTAGAG 59.405 45.833 0.00 0.00 42.18 2.43
6177 10294 4.263243 CCTGAAGGAAATATGCCCTAGAGG 60.263 50.000 0.00 0.00 37.39 3.69
6252 10369 7.490962 TTCATGCTAGAATTGTATTAACCGG 57.509 36.000 0.00 0.00 0.00 5.28
6253 10370 6.822442 TCATGCTAGAATTGTATTAACCGGA 58.178 36.000 9.46 0.00 0.00 5.14
6254 10371 7.276658 TCATGCTAGAATTGTATTAACCGGAA 58.723 34.615 9.46 0.00 0.00 4.30
6255 10372 7.771361 TCATGCTAGAATTGTATTAACCGGAAA 59.229 33.333 9.46 1.61 0.00 3.13
6256 10373 7.311364 TGCTAGAATTGTATTAACCGGAAAC 57.689 36.000 9.46 0.00 0.00 2.78
6257 10374 6.879993 TGCTAGAATTGTATTAACCGGAAACA 59.120 34.615 9.46 1.34 0.00 2.83
6258 10375 7.554835 TGCTAGAATTGTATTAACCGGAAACAT 59.445 33.333 9.46 0.00 0.00 2.71
6259 10376 9.048446 GCTAGAATTGTATTAACCGGAAACATA 57.952 33.333 9.46 0.00 0.00 2.29
6267 10384 9.669887 TGTATTAACCGGAAACATAATACTTGT 57.330 29.630 9.46 0.00 39.89 3.16
6268 10385 9.925268 GTATTAACCGGAAACATAATACTTGTG 57.075 33.333 9.46 0.00 37.84 3.33
6269 10386 7.982761 TTAACCGGAAACATAATACTTGTGT 57.017 32.000 9.46 0.00 36.50 3.72
6270 10387 5.873179 ACCGGAAACATAATACTTGTGTG 57.127 39.130 9.46 0.00 35.07 3.82
6271 10388 5.553123 ACCGGAAACATAATACTTGTGTGA 58.447 37.500 9.46 0.00 35.07 3.58
6272 10389 5.998981 ACCGGAAACATAATACTTGTGTGAA 59.001 36.000 9.46 0.00 35.07 3.18
6273 10390 6.657541 ACCGGAAACATAATACTTGTGTGAAT 59.342 34.615 9.46 0.00 35.07 2.57
6274 10391 7.825270 ACCGGAAACATAATACTTGTGTGAATA 59.175 33.333 9.46 0.00 35.07 1.75
6275 10392 8.120465 CCGGAAACATAATACTTGTGTGAATAC 58.880 37.037 0.00 0.00 35.07 1.89
6276 10393 8.661257 CGGAAACATAATACTTGTGTGAATACA 58.339 33.333 0.00 0.00 35.07 2.29
6286 10403 9.719355 ATACTTGTGTGAATACATAGACAAACA 57.281 29.630 0.00 0.00 39.39 2.83
6287 10404 8.087982 ACTTGTGTGAATACATAGACAAACAG 57.912 34.615 0.00 0.00 39.39 3.16
6288 10405 7.931407 ACTTGTGTGAATACATAGACAAACAGA 59.069 33.333 0.00 0.00 39.39 3.41
6289 10406 7.889589 TGTGTGAATACATAGACAAACAGAG 57.110 36.000 0.00 0.00 39.39 3.35
6290 10407 7.441836 TGTGTGAATACATAGACAAACAGAGT 58.558 34.615 0.00 0.00 39.39 3.24
6291 10408 7.384932 TGTGTGAATACATAGACAAACAGAGTG 59.615 37.037 0.00 0.00 39.39 3.51
6292 10409 7.385205 GTGTGAATACATAGACAAACAGAGTGT 59.615 37.037 0.00 0.00 39.39 3.55
6293 10410 7.598869 TGTGAATACATAGACAAACAGAGTGTC 59.401 37.037 0.00 0.00 44.75 3.67
6294 10411 7.598869 GTGAATACATAGACAAACAGAGTGTCA 59.401 37.037 7.26 0.00 46.44 3.58
6295 10412 7.598869 TGAATACATAGACAAACAGAGTGTCAC 59.401 37.037 7.26 0.00 46.44 3.67
6296 10413 5.537300 ACATAGACAAACAGAGTGTCACT 57.463 39.130 4.81 4.81 46.44 3.41
6297 10414 6.650427 ACATAGACAAACAGAGTGTCACTA 57.350 37.500 5.21 0.00 46.44 2.74
6298 10415 6.682746 ACATAGACAAACAGAGTGTCACTAG 58.317 40.000 5.21 4.44 46.44 2.57
6299 10416 6.265649 ACATAGACAAACAGAGTGTCACTAGT 59.734 38.462 5.21 5.11 46.44 2.57
6300 10417 7.447545 ACATAGACAAACAGAGTGTCACTAGTA 59.552 37.037 5.21 0.00 46.44 1.82
6301 10418 6.902771 AGACAAACAGAGTGTCACTAGTAT 57.097 37.500 5.21 0.00 46.44 2.12
6302 10419 6.682746 AGACAAACAGAGTGTCACTAGTATG 58.317 40.000 5.21 5.56 46.44 2.39
6303 10420 5.230942 ACAAACAGAGTGTCACTAGTATGC 58.769 41.667 5.21 0.00 0.00 3.14
6304 10421 4.457834 AACAGAGTGTCACTAGTATGCC 57.542 45.455 5.21 0.00 0.00 4.40
6305 10422 3.702792 ACAGAGTGTCACTAGTATGCCT 58.297 45.455 5.21 0.00 0.00 4.75
6306 10423 3.697045 ACAGAGTGTCACTAGTATGCCTC 59.303 47.826 5.21 0.00 0.00 4.70
6307 10424 3.951037 CAGAGTGTCACTAGTATGCCTCT 59.049 47.826 5.21 1.89 0.00 3.69
6308 10425 5.126779 CAGAGTGTCACTAGTATGCCTCTA 58.873 45.833 5.21 0.00 0.00 2.43
6309 10426 5.008217 CAGAGTGTCACTAGTATGCCTCTAC 59.992 48.000 5.21 0.00 0.00 2.59
6310 10427 5.104277 AGAGTGTCACTAGTATGCCTCTACT 60.104 44.000 5.21 0.00 36.04 2.57
6311 10428 5.511363 AGTGTCACTAGTATGCCTCTACTT 58.489 41.667 2.87 0.00 33.96 2.24
6312 10429 5.358442 AGTGTCACTAGTATGCCTCTACTTG 59.642 44.000 2.87 0.00 33.96 3.16
6313 10430 5.357314 GTGTCACTAGTATGCCTCTACTTGA 59.643 44.000 0.00 0.18 33.96 3.02
6314 10431 5.357314 TGTCACTAGTATGCCTCTACTTGAC 59.643 44.000 0.00 11.98 38.64 3.18
6315 10432 5.591067 GTCACTAGTATGCCTCTACTTGACT 59.409 44.000 0.00 0.00 36.95 3.41
6316 10433 6.766944 GTCACTAGTATGCCTCTACTTGACTA 59.233 42.308 0.00 0.00 36.95 2.59
6317 10434 6.993308 TCACTAGTATGCCTCTACTTGACTAG 59.007 42.308 0.00 0.00 40.35 2.57
6318 10435 5.766174 ACTAGTATGCCTCTACTTGACTAGC 59.234 44.000 0.00 0.00 38.86 3.42
6319 10436 4.798882 AGTATGCCTCTACTTGACTAGCT 58.201 43.478 0.00 0.00 0.00 3.32
6320 10437 4.825085 AGTATGCCTCTACTTGACTAGCTC 59.175 45.833 0.00 0.00 0.00 4.09
6321 10438 2.017782 TGCCTCTACTTGACTAGCTCG 58.982 52.381 0.00 0.00 0.00 5.03
6322 10439 2.018515 GCCTCTACTTGACTAGCTCGT 58.981 52.381 0.00 0.00 0.00 4.18
6323 10440 2.424246 GCCTCTACTTGACTAGCTCGTT 59.576 50.000 0.00 0.00 0.00 3.85
6324 10441 3.732471 GCCTCTACTTGACTAGCTCGTTG 60.732 52.174 0.00 0.00 0.00 4.10
6325 10442 3.690139 CCTCTACTTGACTAGCTCGTTGA 59.310 47.826 0.00 0.00 0.00 3.18
6326 10443 4.336993 CCTCTACTTGACTAGCTCGTTGAT 59.663 45.833 0.00 0.00 0.00 2.57
6327 10444 5.487153 TCTACTTGACTAGCTCGTTGATC 57.513 43.478 0.00 0.00 0.00 2.92
6328 10445 4.941873 TCTACTTGACTAGCTCGTTGATCA 59.058 41.667 0.00 0.00 0.00 2.92
6329 10446 4.521130 ACTTGACTAGCTCGTTGATCAA 57.479 40.909 3.38 3.38 0.00 2.57
6330 10447 4.883083 ACTTGACTAGCTCGTTGATCAAA 58.117 39.130 10.35 0.00 0.00 2.69
6331 10448 4.926238 ACTTGACTAGCTCGTTGATCAAAG 59.074 41.667 10.35 12.64 0.00 2.77
6332 10449 4.783764 TGACTAGCTCGTTGATCAAAGA 57.216 40.909 20.62 20.62 0.00 2.52
6333 10450 5.330455 TGACTAGCTCGTTGATCAAAGAT 57.670 39.130 21.83 12.82 0.00 2.40
6334 10451 5.105063 TGACTAGCTCGTTGATCAAAGATG 58.895 41.667 21.83 16.63 0.00 2.90
6335 10452 4.437239 ACTAGCTCGTTGATCAAAGATGG 58.563 43.478 21.83 14.18 0.00 3.51
6336 10453 3.340814 AGCTCGTTGATCAAAGATGGT 57.659 42.857 21.83 17.63 0.00 3.55
6337 10454 3.679389 AGCTCGTTGATCAAAGATGGTT 58.321 40.909 21.83 8.86 0.00 3.67
6338 10455 4.832248 AGCTCGTTGATCAAAGATGGTTA 58.168 39.130 21.83 1.90 0.00 2.85
6339 10456 5.431765 AGCTCGTTGATCAAAGATGGTTAT 58.568 37.500 21.83 4.91 0.00 1.89
6340 10457 5.295292 AGCTCGTTGATCAAAGATGGTTATG 59.705 40.000 21.83 11.16 0.00 1.90
6341 10458 5.065218 GCTCGTTGATCAAAGATGGTTATGT 59.935 40.000 21.83 0.00 0.00 2.29
6342 10459 6.403636 GCTCGTTGATCAAAGATGGTTATGTT 60.404 38.462 21.83 0.00 0.00 2.71
6343 10460 7.447374 TCGTTGATCAAAGATGGTTATGTTT 57.553 32.000 18.50 0.00 30.61 2.83
6344 10461 7.526608 TCGTTGATCAAAGATGGTTATGTTTC 58.473 34.615 18.50 0.00 28.23 2.78
6345 10462 6.747280 CGTTGATCAAAGATGGTTATGTTTCC 59.253 38.462 15.34 0.00 28.23 3.13
6346 10463 7.362056 CGTTGATCAAAGATGGTTATGTTTCCT 60.362 37.037 15.34 0.00 28.23 3.36
6347 10464 8.956426 GTTGATCAAAGATGGTTATGTTTCCTA 58.044 33.333 10.35 0.00 28.23 2.94
6348 10465 8.737168 TGATCAAAGATGGTTATGTTTCCTAG 57.263 34.615 0.00 0.00 28.23 3.02
6349 10466 7.283127 TGATCAAAGATGGTTATGTTTCCTAGC 59.717 37.037 0.00 0.00 28.23 3.42
6350 10467 5.885912 TCAAAGATGGTTATGTTTCCTAGCC 59.114 40.000 0.00 0.00 28.23 3.93
6351 10468 5.450818 AAGATGGTTATGTTTCCTAGCCA 57.549 39.130 0.00 0.00 34.50 4.75
6352 10469 5.653255 AGATGGTTATGTTTCCTAGCCAT 57.347 39.130 0.00 0.00 41.28 4.40
6353 10470 6.018433 AGATGGTTATGTTTCCTAGCCATT 57.982 37.500 0.00 0.00 39.44 3.16
6354 10471 5.829924 AGATGGTTATGTTTCCTAGCCATTG 59.170 40.000 0.00 0.00 39.44 2.82
6355 10472 5.186256 TGGTTATGTTTCCTAGCCATTGA 57.814 39.130 0.00 0.00 0.00 2.57
6356 10473 4.947388 TGGTTATGTTTCCTAGCCATTGAC 59.053 41.667 0.00 0.00 0.00 3.18
6357 10474 4.947388 GGTTATGTTTCCTAGCCATTGACA 59.053 41.667 0.00 0.00 0.00 3.58
6358 10475 5.594317 GGTTATGTTTCCTAGCCATTGACAT 59.406 40.000 0.00 0.00 0.00 3.06
6359 10476 6.460123 GGTTATGTTTCCTAGCCATTGACATG 60.460 42.308 0.00 0.00 0.00 3.21
6360 10477 4.299586 TGTTTCCTAGCCATTGACATGA 57.700 40.909 0.00 0.00 31.07 3.07
6361 10478 4.264253 TGTTTCCTAGCCATTGACATGAG 58.736 43.478 0.00 0.00 31.07 2.90
6362 10479 4.263462 TGTTTCCTAGCCATTGACATGAGT 60.263 41.667 0.00 0.00 31.07 3.41
6363 10480 4.574674 TTCCTAGCCATTGACATGAGTT 57.425 40.909 0.00 0.00 31.07 3.01
6364 10481 3.877559 TCCTAGCCATTGACATGAGTTG 58.122 45.455 0.00 0.00 31.07 3.16
6365 10482 3.264193 TCCTAGCCATTGACATGAGTTGT 59.736 43.478 0.00 0.00 42.79 3.32
6379 10496 6.611381 ACATGAGTTGTCATTTGATTAACGG 58.389 36.000 0.00 0.00 40.84 4.44
6380 10497 5.621197 TGAGTTGTCATTTGATTAACGGG 57.379 39.130 0.00 0.00 32.73 5.28
6381 10498 5.309638 TGAGTTGTCATTTGATTAACGGGA 58.690 37.500 0.00 0.00 32.73 5.14
6382 10499 5.943416 TGAGTTGTCATTTGATTAACGGGAT 59.057 36.000 0.00 0.00 32.73 3.85
6383 10500 6.093495 TGAGTTGTCATTTGATTAACGGGATC 59.907 38.462 0.00 0.00 32.73 3.36
6384 10501 5.943416 AGTTGTCATTTGATTAACGGGATCA 59.057 36.000 0.00 0.00 32.73 2.92
6385 10502 5.811399 TGTCATTTGATTAACGGGATCAC 57.189 39.130 0.00 0.00 33.51 3.06
6386 10503 5.249420 TGTCATTTGATTAACGGGATCACA 58.751 37.500 0.00 0.00 33.51 3.58
6387 10504 5.885352 TGTCATTTGATTAACGGGATCACAT 59.115 36.000 0.00 0.00 33.51 3.21
6388 10505 6.038161 TGTCATTTGATTAACGGGATCACATC 59.962 38.462 0.00 0.00 33.51 3.06
6389 10506 6.038161 GTCATTTGATTAACGGGATCACATCA 59.962 38.462 0.00 0.00 33.51 3.07
6390 10507 6.772233 TCATTTGATTAACGGGATCACATCAT 59.228 34.615 0.00 0.00 33.51 2.45
6391 10508 7.285172 TCATTTGATTAACGGGATCACATCATT 59.715 33.333 0.00 0.00 33.51 2.57
6392 10509 8.567104 CATTTGATTAACGGGATCACATCATTA 58.433 33.333 0.00 0.00 33.51 1.90
6393 10510 7.728847 TTGATTAACGGGATCACATCATTAG 57.271 36.000 0.00 0.00 33.51 1.73
6394 10511 6.230472 TGATTAACGGGATCACATCATTAGG 58.770 40.000 0.00 0.00 0.00 2.69
6395 10512 5.880164 TTAACGGGATCACATCATTAGGA 57.120 39.130 0.00 0.00 0.00 2.94
6396 10513 4.342862 AACGGGATCACATCATTAGGAG 57.657 45.455 0.00 0.00 0.00 3.69
6397 10514 3.576861 ACGGGATCACATCATTAGGAGA 58.423 45.455 0.00 0.00 0.00 3.71
6398 10515 3.967326 ACGGGATCACATCATTAGGAGAA 59.033 43.478 0.00 0.00 0.00 2.87
6399 10516 4.594920 ACGGGATCACATCATTAGGAGAAT 59.405 41.667 0.00 0.00 0.00 2.40
6400 10517 4.934001 CGGGATCACATCATTAGGAGAATG 59.066 45.833 0.00 0.00 0.00 2.67
6401 10518 5.279657 CGGGATCACATCATTAGGAGAATGA 60.280 44.000 0.00 2.66 40.50 2.57
6402 10519 6.575847 CGGGATCACATCATTAGGAGAATGAT 60.576 42.308 6.90 6.90 45.40 2.45
6411 10528 8.618702 ATCATTAGGAGAATGATGTGATTGAC 57.381 34.615 11.08 0.00 43.52 3.18
6412 10529 7.799081 TCATTAGGAGAATGATGTGATTGACT 58.201 34.615 0.00 0.00 32.21 3.41
6413 10530 8.270030 TCATTAGGAGAATGATGTGATTGACTT 58.730 33.333 0.00 0.00 32.21 3.01
6414 10531 7.854557 TTAGGAGAATGATGTGATTGACTTG 57.145 36.000 0.00 0.00 0.00 3.16
6415 10532 6.058553 AGGAGAATGATGTGATTGACTTGA 57.941 37.500 0.00 0.00 0.00 3.02
6416 10533 5.879223 AGGAGAATGATGTGATTGACTTGAC 59.121 40.000 0.00 0.00 0.00 3.18
6417 10534 5.065731 GGAGAATGATGTGATTGACTTGACC 59.934 44.000 0.00 0.00 0.00 4.02
6418 10535 4.946157 AGAATGATGTGATTGACTTGACCC 59.054 41.667 0.00 0.00 0.00 4.46
6419 10536 3.786368 TGATGTGATTGACTTGACCCA 57.214 42.857 0.00 0.00 0.00 4.51
6420 10537 4.305539 TGATGTGATTGACTTGACCCAT 57.694 40.909 0.00 0.00 0.00 4.00
6421 10538 4.665451 TGATGTGATTGACTTGACCCATT 58.335 39.130 0.00 0.00 0.00 3.16
6422 10539 4.701651 TGATGTGATTGACTTGACCCATTC 59.298 41.667 0.00 0.00 0.00 2.67
6423 10540 3.420893 TGTGATTGACTTGACCCATTCC 58.579 45.455 0.00 0.00 0.00 3.01
6424 10541 3.181435 TGTGATTGACTTGACCCATTCCA 60.181 43.478 0.00 0.00 0.00 3.53
6425 10542 4.019174 GTGATTGACTTGACCCATTCCAT 58.981 43.478 0.00 0.00 0.00 3.41
6426 10543 4.463891 GTGATTGACTTGACCCATTCCATT 59.536 41.667 0.00 0.00 0.00 3.16
6427 10544 5.652014 GTGATTGACTTGACCCATTCCATTA 59.348 40.000 0.00 0.00 0.00 1.90
6428 10545 5.887598 TGATTGACTTGACCCATTCCATTAG 59.112 40.000 0.00 0.00 0.00 1.73
6429 10546 3.620488 TGACTTGACCCATTCCATTAGC 58.380 45.455 0.00 0.00 0.00 3.09
6430 10547 3.266772 TGACTTGACCCATTCCATTAGCT 59.733 43.478 0.00 0.00 0.00 3.32
6431 10548 4.263905 TGACTTGACCCATTCCATTAGCTT 60.264 41.667 0.00 0.00 0.00 3.74
6432 10549 5.045213 TGACTTGACCCATTCCATTAGCTTA 60.045 40.000 0.00 0.00 0.00 3.09
6433 10550 5.440610 ACTTGACCCATTCCATTAGCTTAG 58.559 41.667 0.00 0.00 0.00 2.18
6434 10551 3.820557 TGACCCATTCCATTAGCTTAGC 58.179 45.455 0.00 0.00 0.00 3.09
6435 10552 3.201930 TGACCCATTCCATTAGCTTAGCA 59.798 43.478 7.07 0.00 0.00 3.49
6436 10553 3.555966 ACCCATTCCATTAGCTTAGCAC 58.444 45.455 7.07 0.00 0.00 4.40
6437 10554 3.203040 ACCCATTCCATTAGCTTAGCACT 59.797 43.478 7.07 0.00 0.00 4.40
6438 10555 3.817647 CCCATTCCATTAGCTTAGCACTC 59.182 47.826 7.07 0.00 0.00 3.51
6439 10556 3.496130 CCATTCCATTAGCTTAGCACTCG 59.504 47.826 7.07 0.00 0.00 4.18
6440 10557 4.371786 CATTCCATTAGCTTAGCACTCGA 58.628 43.478 7.07 0.00 0.00 4.04
6441 10558 4.672587 TTCCATTAGCTTAGCACTCGAT 57.327 40.909 7.07 0.00 0.00 3.59
6442 10559 4.244425 TCCATTAGCTTAGCACTCGATC 57.756 45.455 7.07 0.00 0.00 3.69
6443 10560 2.983136 CCATTAGCTTAGCACTCGATCG 59.017 50.000 9.36 9.36 0.00 3.69
6444 10561 3.551046 CCATTAGCTTAGCACTCGATCGT 60.551 47.826 15.94 0.00 0.00 3.73
6445 10562 3.777465 TTAGCTTAGCACTCGATCGTT 57.223 42.857 15.94 0.04 0.00 3.85
6446 10563 2.656560 AGCTTAGCACTCGATCGTTT 57.343 45.000 15.94 0.00 0.00 3.60
6447 10564 3.777465 AGCTTAGCACTCGATCGTTTA 57.223 42.857 15.94 0.00 0.00 2.01
6448 10565 3.696898 AGCTTAGCACTCGATCGTTTAG 58.303 45.455 15.94 7.91 0.00 1.85
6449 10566 3.128938 AGCTTAGCACTCGATCGTTTAGT 59.871 43.478 15.94 8.62 0.00 2.24
6450 10567 4.334759 AGCTTAGCACTCGATCGTTTAGTA 59.665 41.667 15.94 0.27 0.00 1.82
6451 10568 5.008811 AGCTTAGCACTCGATCGTTTAGTAT 59.991 40.000 15.94 6.33 0.00 2.12
6452 10569 5.686397 GCTTAGCACTCGATCGTTTAGTATT 59.314 40.000 15.94 5.71 0.00 1.89
6453 10570 6.129404 GCTTAGCACTCGATCGTTTAGTATTC 60.129 42.308 15.94 4.59 0.00 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 5.534654 TGCTTTACATAAGAGGCTTGTTTGT 59.465 36.000 0.00 0.00 0.00 2.83
108 109 4.420168 CTTTTGCACTTTTGTTCTCCGAA 58.580 39.130 0.00 0.00 0.00 4.30
176 177 1.377333 GCCAAGCTAACGCCTCCTT 60.377 57.895 0.00 0.00 36.60 3.36
218 1067 3.357203 TCTACCGCTCTCTTCAATGTCT 58.643 45.455 0.00 0.00 0.00 3.41
237 1086 1.920835 GTGGCCAGGACTTCCCTCT 60.921 63.158 5.11 0.00 45.60 3.69
300 1149 1.616159 GTACACACATGGGGTTTGCT 58.384 50.000 0.00 0.00 30.10 3.91
445 1308 6.093771 ACAAACATTTTTATATACGCGGTGGA 59.906 34.615 12.47 0.00 0.00 4.02
652 1525 6.976349 CGGCTTAGTTTGTTTTACCTTTTCTT 59.024 34.615 0.00 0.00 0.00 2.52
654 1527 6.497437 TCGGCTTAGTTTGTTTTACCTTTTC 58.503 36.000 0.00 0.00 0.00 2.29
676 1549 9.516314 ACTTTTCCTTTTTCTTTCAATACTTCG 57.484 29.630 0.00 0.00 0.00 3.79
853 1734 0.908198 CAAACCAGGGGAGAGGAGAG 59.092 60.000 0.00 0.00 0.00 3.20
854 1735 0.193574 ACAAACCAGGGGAGAGGAGA 59.806 55.000 0.00 0.00 0.00 3.71
855 1736 1.068121 AACAAACCAGGGGAGAGGAG 58.932 55.000 0.00 0.00 0.00 3.69
856 1737 1.982958 GTAACAAACCAGGGGAGAGGA 59.017 52.381 0.00 0.00 0.00 3.71
857 1738 1.985895 AGTAACAAACCAGGGGAGAGG 59.014 52.381 0.00 0.00 0.00 3.69
1195 2086 0.523757 GCGGTGAGAAGAGTAGCGAC 60.524 60.000 0.00 0.00 37.49 5.19
1206 2097 2.190313 GATGCATGGGCGGTGAGA 59.810 61.111 2.46 0.00 45.35 3.27
1254 2147 7.566760 AACCAGCGACAATTAATATGAATCA 57.433 32.000 0.00 0.00 0.00 2.57
1258 2151 9.037737 GTACTAAACCAGCGACAATTAATATGA 57.962 33.333 0.00 0.00 0.00 2.15
1362 2270 9.241919 TCAATATAAGTGCAAAGAAGGAATTCA 57.758 29.630 7.93 0.00 0.00 2.57
1473 3384 7.444487 ACAAGTAATTTCAAACAGAGGGAGTAC 59.556 37.037 0.00 0.00 0.00 2.73
1474 3385 7.514721 ACAAGTAATTTCAAACAGAGGGAGTA 58.485 34.615 0.00 0.00 0.00 2.59
1475 3386 6.365520 ACAAGTAATTTCAAACAGAGGGAGT 58.634 36.000 0.00 0.00 0.00 3.85
1476 3387 6.712547 AGACAAGTAATTTCAAACAGAGGGAG 59.287 38.462 0.00 0.00 0.00 4.30
1477 3388 6.601332 AGACAAGTAATTTCAAACAGAGGGA 58.399 36.000 0.00 0.00 0.00 4.20
1478 3389 6.347725 CGAGACAAGTAATTTCAAACAGAGGG 60.348 42.308 0.00 0.00 0.00 4.30
1479 3390 6.423905 TCGAGACAAGTAATTTCAAACAGAGG 59.576 38.462 0.00 0.00 0.00 3.69
1480 3391 7.408132 TCGAGACAAGTAATTTCAAACAGAG 57.592 36.000 0.00 0.00 0.00 3.35
1481 3392 7.780008 TTCGAGACAAGTAATTTCAAACAGA 57.220 32.000 0.00 0.00 0.00 3.41
1482 3393 8.835467 TTTTCGAGACAAGTAATTTCAAACAG 57.165 30.769 0.00 0.00 0.00 3.16
1483 3394 9.232082 CATTTTCGAGACAAGTAATTTCAAACA 57.768 29.630 0.00 0.00 0.00 2.83
1484 3395 8.690840 CCATTTTCGAGACAAGTAATTTCAAAC 58.309 33.333 0.00 0.00 0.00 2.93
1485 3396 8.625651 TCCATTTTCGAGACAAGTAATTTCAAA 58.374 29.630 0.00 0.00 0.00 2.69
1486 3397 8.160521 TCCATTTTCGAGACAAGTAATTTCAA 57.839 30.769 0.00 0.00 0.00 2.69
1487 3398 7.737972 TCCATTTTCGAGACAAGTAATTTCA 57.262 32.000 0.00 0.00 0.00 2.69
1488 3399 8.237267 ACATCCATTTTCGAGACAAGTAATTTC 58.763 33.333 0.00 0.00 0.00 2.17
1489 3400 8.110860 ACATCCATTTTCGAGACAAGTAATTT 57.889 30.769 0.00 0.00 0.00 1.82
1531 3442 7.694367 CGTCATAGAAATGGATGTATCTAGACG 59.306 40.741 0.00 0.00 38.31 4.18
1532 3443 8.731605 TCGTCATAGAAATGGATGTATCTAGAC 58.268 37.037 0.00 0.00 33.61 2.59
1534 3445 8.735315 ACTCGTCATAGAAATGGATGTATCTAG 58.265 37.037 0.00 0.00 33.61 2.43
1544 3455 6.213677 TCGGAATTACTCGTCATAGAAATGG 58.786 40.000 0.00 0.00 33.61 3.16
1545 3456 7.556433 GTTCGGAATTACTCGTCATAGAAATG 58.444 38.462 0.00 0.00 0.00 2.32
1552 3463 2.424601 TCCGTTCGGAATTACTCGTCAT 59.575 45.455 11.66 0.00 0.00 3.06
1553 3464 1.811965 TCCGTTCGGAATTACTCGTCA 59.188 47.619 11.66 0.00 0.00 4.35
1573 3484 7.417570 CGTGGTCTAAACAATCTTATACTCCCT 60.418 40.741 0.00 0.00 0.00 4.20
1574 3485 6.700520 CGTGGTCTAAACAATCTTATACTCCC 59.299 42.308 0.00 0.00 0.00 4.30
1576 3487 8.922058 TTCGTGGTCTAAACAATCTTATACTC 57.078 34.615 0.00 0.00 0.00 2.59
1577 3488 9.367444 CTTTCGTGGTCTAAACAATCTTATACT 57.633 33.333 0.00 0.00 0.00 2.12
1714 3682 1.388547 AGGTTGCGTTGTTGTCATGT 58.611 45.000 0.00 0.00 0.00 3.21
1775 3826 3.222394 ACTTCCCCTTGATTCCCTAGT 57.778 47.619 0.00 0.00 0.00 2.57
1776 3827 4.101741 CACTACTTCCCCTTGATTCCCTAG 59.898 50.000 0.00 0.00 0.00 3.02
1813 3864 2.096442 GTTTTCGACCGGGCGTAGG 61.096 63.158 32.26 0.08 0.00 3.18
1818 3870 1.022451 TGCTATGTTTTCGACCGGGC 61.022 55.000 6.32 0.00 0.00 6.13
1936 4040 6.803154 AGTGTTATAGGTCTTTGCAAAGTC 57.197 37.500 32.46 27.70 37.31 3.01
1958 4062 9.467258 AACTTTGTGACAATGATTATGAACAAG 57.533 29.630 16.73 1.33 33.17 3.16
2049 4153 0.038744 TTCCGAACGGAGGGAGTAGT 59.961 55.000 15.34 0.00 46.06 2.73
2050 4154 1.400737 ATTCCGAACGGAGGGAGTAG 58.599 55.000 15.34 0.00 46.06 2.57
2051 4155 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
2052 4156 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
2053 4157 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
2054 4158 1.753073 GAGTAATTCCGAACGGAGGGA 59.247 52.381 15.34 2.49 46.06 4.20
2055 4159 1.535437 CGAGTAATTCCGAACGGAGGG 60.535 57.143 15.34 0.00 46.06 4.30
2056 4160 1.133790 ACGAGTAATTCCGAACGGAGG 59.866 52.381 15.34 4.28 46.06 4.30
2057 4161 2.159476 TGACGAGTAATTCCGAACGGAG 60.159 50.000 15.34 5.60 46.06 4.63
2058 4162 1.811965 TGACGAGTAATTCCGAACGGA 59.188 47.619 12.04 12.04 43.52 4.69
2059 4163 1.916000 GTGACGAGTAATTCCGAACGG 59.084 52.381 6.94 6.94 0.00 4.44
2060 4164 2.587956 TGTGACGAGTAATTCCGAACG 58.412 47.619 0.00 0.00 0.00 3.95
2061 4165 3.829948 TCTGTGACGAGTAATTCCGAAC 58.170 45.455 0.00 0.00 0.00 3.95
2062 4166 4.508461 TTCTGTGACGAGTAATTCCGAA 57.492 40.909 0.00 0.00 0.00 4.30
2063 4167 4.508461 TTTCTGTGACGAGTAATTCCGA 57.492 40.909 0.00 0.00 0.00 4.55
2064 4168 6.263344 TCTATTTCTGTGACGAGTAATTCCG 58.737 40.000 0.00 0.00 0.00 4.30
2065 4169 7.707035 ACATCTATTTCTGTGACGAGTAATTCC 59.293 37.037 0.00 0.00 0.00 3.01
2066 4170 8.635877 ACATCTATTTCTGTGACGAGTAATTC 57.364 34.615 0.00 0.00 0.00 2.17
2068 4172 9.900710 GATACATCTATTTCTGTGACGAGTAAT 57.099 33.333 0.00 0.00 0.00 1.89
2069 4173 9.121658 AGATACATCTATTTCTGTGACGAGTAA 57.878 33.333 0.00 0.00 34.85 2.24
2070 4174 8.678593 AGATACATCTATTTCTGTGACGAGTA 57.321 34.615 0.00 0.00 34.85 2.59
2071 4175 7.575414 AGATACATCTATTTCTGTGACGAGT 57.425 36.000 0.00 0.00 34.85 4.18
2072 4176 8.994170 TCTAGATACATCTATTTCTGTGACGAG 58.006 37.037 0.00 0.00 38.60 4.18
2073 4177 8.775527 GTCTAGATACATCTATTTCTGTGACGA 58.224 37.037 0.00 0.00 38.60 4.20
2074 4178 7.742525 CGTCTAGATACATCTATTTCTGTGACG 59.257 40.741 14.84 14.84 39.43 4.35
2075 4179 8.561212 ACGTCTAGATACATCTATTTCTGTGAC 58.439 37.037 0.00 2.21 38.60 3.67
2076 4180 8.678593 ACGTCTAGATACATCTATTTCTGTGA 57.321 34.615 0.00 0.00 38.60 3.58
2105 4209 9.967346 CTCGAAAATGGATGTATCTAGAACTAA 57.033 33.333 0.00 0.00 0.00 2.24
2106 4210 9.350951 TCTCGAAAATGGATGTATCTAGAACTA 57.649 33.333 0.00 0.00 0.00 2.24
2107 4211 8.138712 GTCTCGAAAATGGATGTATCTAGAACT 58.861 37.037 0.00 0.00 0.00 3.01
2108 4212 7.921214 TGTCTCGAAAATGGATGTATCTAGAAC 59.079 37.037 0.00 0.00 0.00 3.01
2109 4213 8.007405 TGTCTCGAAAATGGATGTATCTAGAA 57.993 34.615 0.00 0.00 0.00 2.10
2110 4214 7.582667 TGTCTCGAAAATGGATGTATCTAGA 57.417 36.000 0.00 0.00 0.00 2.43
2111 4215 7.923344 ACTTGTCTCGAAAATGGATGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
2112 4216 7.782049 ACTTGTCTCGAAAATGGATGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
2113 4217 6.644347 ACTTGTCTCGAAAATGGATGTATCT 58.356 36.000 0.00 0.00 0.00 1.98
2114 4218 6.910536 ACTTGTCTCGAAAATGGATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
2115 4219 8.964476 ATTACTTGTCTCGAAAATGGATGTAT 57.036 30.769 0.00 0.00 0.00 2.29
2116 4220 8.786826 AATTACTTGTCTCGAAAATGGATGTA 57.213 30.769 0.00 0.00 0.00 2.29
2117 4221 7.687941 AATTACTTGTCTCGAAAATGGATGT 57.312 32.000 0.00 0.00 0.00 3.06
2118 4222 8.236586 TGAAATTACTTGTCTCGAAAATGGATG 58.763 33.333 0.00 0.00 0.00 3.51
2119 4223 8.335532 TGAAATTACTTGTCTCGAAAATGGAT 57.664 30.769 0.00 0.00 0.00 3.41
2120 4224 7.737972 TGAAATTACTTGTCTCGAAAATGGA 57.262 32.000 0.00 0.00 0.00 3.41
2121 4225 8.690840 GTTTGAAATTACTTGTCTCGAAAATGG 58.309 33.333 0.00 0.00 0.00 3.16
2122 4226 8.409690 CGTTTGAAATTACTTGTCTCGAAAATG 58.590 33.333 0.00 0.00 0.00 2.32
2123 4227 7.589954 CCGTTTGAAATTACTTGTCTCGAAAAT 59.410 33.333 0.00 0.00 0.00 1.82
2124 4228 6.908284 CCGTTTGAAATTACTTGTCTCGAAAA 59.092 34.615 0.00 0.00 0.00 2.29
2125 4229 6.258287 TCCGTTTGAAATTACTTGTCTCGAAA 59.742 34.615 0.00 0.00 0.00 3.46
2126 4230 5.754406 TCCGTTTGAAATTACTTGTCTCGAA 59.246 36.000 0.00 0.00 0.00 3.71
2127 4231 5.291178 TCCGTTTGAAATTACTTGTCTCGA 58.709 37.500 0.00 0.00 0.00 4.04
2128 4232 5.389516 CCTCCGTTTGAAATTACTTGTCTCG 60.390 44.000 0.00 0.00 0.00 4.04
2129 4233 5.106673 CCCTCCGTTTGAAATTACTTGTCTC 60.107 44.000 0.00 0.00 0.00 3.36
2130 4234 4.760204 CCCTCCGTTTGAAATTACTTGTCT 59.240 41.667 0.00 0.00 0.00 3.41
2131 4235 4.758165 TCCCTCCGTTTGAAATTACTTGTC 59.242 41.667 0.00 0.00 0.00 3.18
2132 4236 4.721132 TCCCTCCGTTTGAAATTACTTGT 58.279 39.130 0.00 0.00 0.00 3.16
2133 4237 4.760204 ACTCCCTCCGTTTGAAATTACTTG 59.240 41.667 0.00 0.00 0.00 3.16
2134 4238 4.981812 ACTCCCTCCGTTTGAAATTACTT 58.018 39.130 0.00 0.00 0.00 2.24
2135 4239 4.635699 ACTCCCTCCGTTTGAAATTACT 57.364 40.909 0.00 0.00 0.00 2.24
2136 4240 6.997239 ATTACTCCCTCCGTTTGAAATTAC 57.003 37.500 0.00 0.00 0.00 1.89
2137 4241 6.376018 CCAATTACTCCCTCCGTTTGAAATTA 59.624 38.462 0.00 0.00 0.00 1.40
2138 4242 5.185056 CCAATTACTCCCTCCGTTTGAAATT 59.815 40.000 0.00 0.00 0.00 1.82
2139 4243 4.705023 CCAATTACTCCCTCCGTTTGAAAT 59.295 41.667 0.00 0.00 0.00 2.17
2140 4244 4.076394 CCAATTACTCCCTCCGTTTGAAA 58.924 43.478 0.00 0.00 0.00 2.69
2141 4245 3.328343 TCCAATTACTCCCTCCGTTTGAA 59.672 43.478 0.00 0.00 0.00 2.69
2142 4246 2.907696 TCCAATTACTCCCTCCGTTTGA 59.092 45.455 0.00 0.00 0.00 2.69
2143 4247 3.343941 TCCAATTACTCCCTCCGTTTG 57.656 47.619 0.00 0.00 0.00 2.93
2144 4248 4.472108 TGTATCCAATTACTCCCTCCGTTT 59.528 41.667 0.00 0.00 0.00 3.60
2145 4249 4.035112 TGTATCCAATTACTCCCTCCGTT 58.965 43.478 0.00 0.00 0.00 4.44
2146 4250 3.387050 GTGTATCCAATTACTCCCTCCGT 59.613 47.826 0.00 0.00 0.00 4.69
2147 4251 3.641906 AGTGTATCCAATTACTCCCTCCG 59.358 47.826 0.00 0.00 0.00 4.63
2148 4252 5.279556 GCTAGTGTATCCAATTACTCCCTCC 60.280 48.000 0.00 0.00 0.00 4.30
2149 4253 5.304614 TGCTAGTGTATCCAATTACTCCCTC 59.695 44.000 0.00 0.00 0.00 4.30
2150 4254 5.070580 GTGCTAGTGTATCCAATTACTCCCT 59.929 44.000 0.00 0.00 0.00 4.20
2151 4255 5.298347 GTGCTAGTGTATCCAATTACTCCC 58.702 45.833 0.00 0.00 0.00 4.30
2152 4256 5.163343 TGGTGCTAGTGTATCCAATTACTCC 60.163 44.000 0.00 0.00 0.00 3.85
2153 4257 5.753921 GTGGTGCTAGTGTATCCAATTACTC 59.246 44.000 0.00 0.00 0.00 2.59
2217 4338 8.781196 CAGGGAAGAACATAACAGATCAATATG 58.219 37.037 0.00 3.39 34.08 1.78
2262 4383 1.144969 ACACGCCATAGACAAACACG 58.855 50.000 0.00 0.00 0.00 4.49
2316 4438 7.096147 GCTAAACACAGTACAGAAGTAACAGAC 60.096 40.741 0.00 0.00 30.67 3.51
2476 4608 2.205022 TAGCTGGACTTTGCTGCATT 57.795 45.000 1.84 0.00 40.08 3.56
2512 4644 2.090267 AGGCTAGTGAGATCCTGGGATT 60.090 50.000 3.45 0.00 34.60 3.01
2513 4645 1.507300 AGGCTAGTGAGATCCTGGGAT 59.493 52.381 1.24 1.24 37.59 3.85
2536 4668 3.304826 GCTTTTGCCTTCGTTTCGAAAAA 59.695 39.130 13.10 3.41 40.27 1.94
2581 5028 5.027099 CCAAGCAATTTGTTTCCGTTTTTG 58.973 37.500 0.00 0.00 34.87 2.44
2587 5034 6.538189 AATTAACCAAGCAATTTGTTTCCG 57.462 33.333 0.00 0.00 34.87 4.30
2590 5037 8.649973 TCGTTAATTAACCAAGCAATTTGTTT 57.350 26.923 20.08 0.00 34.87 2.83
2596 5043 6.349860 GGGTCTTCGTTAATTAACCAAGCAAT 60.350 38.462 23.26 0.00 35.35 3.56
2601 5048 4.002316 CCGGGTCTTCGTTAATTAACCAA 58.998 43.478 20.08 13.99 32.69 3.67
2602 5049 3.598299 CCGGGTCTTCGTTAATTAACCA 58.402 45.455 20.08 7.13 32.69 3.67
2702 5526 2.672996 CTTGGCGGTGTCCCCTTG 60.673 66.667 0.00 0.00 0.00 3.61
2717 5541 2.485426 CGATGACATTGCAGACAACCTT 59.515 45.455 0.00 0.00 38.99 3.50
2724 5548 2.931969 GTGATGACGATGACATTGCAGA 59.068 45.455 2.31 0.00 0.00 4.26
2792 6121 1.106351 TTTGACGGCTTGTGTGGCAT 61.106 50.000 0.00 0.00 0.00 4.40
2810 6139 1.296715 GTGATGCCAGAGGTCCGTT 59.703 57.895 0.00 0.00 0.00 4.44
2887 6216 2.796593 GAGAAACATGCAAGGTTGTTGC 59.203 45.455 0.00 0.00 41.66 4.17
2926 6323 2.609459 GACATCGTGAGCTAAACCCATG 59.391 50.000 0.00 0.00 0.00 3.66
2956 6360 3.122250 CTACTCGTTCGGCGGAGGG 62.122 68.421 7.21 0.71 41.72 4.30
3093 6497 3.576118 CCTGTATCATGTACTCCCTCCAG 59.424 52.174 0.00 0.00 0.00 3.86
3602 7423 3.588511 TGGCAGGCCACCATTCCA 61.589 61.111 13.26 3.73 41.89 3.53
3690 7511 1.032014 GCAAGGTCCAAGCAAGTGAA 58.968 50.000 0.00 0.00 0.00 3.18
4074 7897 4.156739 GGAATTGTGAATCTGGAAGGTGAC 59.843 45.833 0.00 0.00 0.00 3.67
4119 7942 0.977627 ATCCTGGCGATGTGTCTCCA 60.978 55.000 0.00 0.00 36.90 3.86
4146 7969 9.419297 GCAATCGGTATGATGTTATAGAAGTTA 57.581 33.333 0.00 0.00 37.39 2.24
4233 8065 4.526438 ATGGCCCCAATATTCCTATAGC 57.474 45.455 0.00 0.00 0.00 2.97
4235 8067 5.911178 CCTCTATGGCCCCAATATTCCTATA 59.089 44.000 0.00 0.00 0.00 1.31
4236 8068 4.728860 CCTCTATGGCCCCAATATTCCTAT 59.271 45.833 0.00 0.00 0.00 2.57
5210 9296 6.898041 TGTTAGTAATTGGCGATGCATATTC 58.102 36.000 0.00 0.00 0.00 1.75
5471 9562 8.622948 AACTTCTGAATAGTCCCTTTTGTAAG 57.377 34.615 0.00 0.00 0.00 2.34
5531 9623 3.213506 TGGTTGAGGACATCACAAACTG 58.786 45.455 0.00 0.00 37.77 3.16
5532 9624 3.576078 TGGTTGAGGACATCACAAACT 57.424 42.857 0.00 0.00 37.77 2.66
5637 9751 7.725251 TGCTATTTTCACTTTCTGGTTTGAAT 58.275 30.769 0.00 0.00 0.00 2.57
5640 9754 7.769272 TTTGCTATTTTCACTTTCTGGTTTG 57.231 32.000 0.00 0.00 0.00 2.93
5783 9898 2.889678 CTCACAGATCCATCTCGATCCA 59.110 50.000 0.00 0.00 39.67 3.41
5811 9926 3.371965 TGTAGAGACCTATTCACACCCC 58.628 50.000 0.00 0.00 0.00 4.95
5877 9992 2.543238 CCCTAACCGTAGCTCGTTCATC 60.543 54.545 0.00 0.00 37.94 2.92
5905 10020 1.202604 TCTTCGTTTCCTCGTGCCTTT 60.203 47.619 0.00 0.00 0.00 3.11
5914 10029 7.611213 ACATCGAAATAAATCTTCGTTTCCT 57.389 32.000 5.04 0.00 44.64 3.36
5961 10076 2.579201 CACCTCTCCAACGGCGAT 59.421 61.111 16.62 0.00 0.00 4.58
5964 10081 2.198304 ATTCCCACCTCTCCAACGGC 62.198 60.000 0.00 0.00 0.00 5.68
5992 10109 5.536538 TCTTATGCAATGTGGTGTTGGTTTA 59.463 36.000 0.00 0.00 0.00 2.01
6046 10163 1.430228 AAAAACGGACAAAGCGCGT 59.570 47.368 8.43 0.00 0.00 6.01
6086 10203 4.329545 GAGGGTGGACGCCAAGCA 62.330 66.667 4.09 0.00 34.18 3.91
6156 10273 4.982241 CCTCTAGGGCATATTTCCTTCA 57.018 45.455 0.00 0.00 34.75 3.02
6168 10285 8.637196 AATAACTTTATTATTGCCTCTAGGGC 57.363 34.615 13.60 13.60 44.71 5.19
6226 10343 9.214957 CCGGTTAATACAATTCTAGCATGAATA 57.785 33.333 0.00 0.00 35.82 1.75
6227 10344 7.936847 TCCGGTTAATACAATTCTAGCATGAAT 59.063 33.333 0.00 0.00 38.19 2.57
6228 10345 7.276658 TCCGGTTAATACAATTCTAGCATGAA 58.723 34.615 0.00 0.00 0.00 2.57
6229 10346 6.822442 TCCGGTTAATACAATTCTAGCATGA 58.178 36.000 0.00 0.00 0.00 3.07
6230 10347 7.490962 TTCCGGTTAATACAATTCTAGCATG 57.509 36.000 0.00 0.00 0.00 4.06
6231 10348 7.554835 TGTTTCCGGTTAATACAATTCTAGCAT 59.445 33.333 0.00 0.00 0.00 3.79
6232 10349 6.879993 TGTTTCCGGTTAATACAATTCTAGCA 59.120 34.615 0.00 0.00 0.00 3.49
6233 10350 7.311364 TGTTTCCGGTTAATACAATTCTAGC 57.689 36.000 0.00 0.00 0.00 3.42
6241 10358 9.669887 ACAAGTATTATGTTTCCGGTTAATACA 57.330 29.630 21.49 13.53 38.83 2.29
6242 10359 9.925268 CACAAGTATTATGTTTCCGGTTAATAC 57.075 33.333 0.00 12.09 37.60 1.89
6243 10360 9.669887 ACACAAGTATTATGTTTCCGGTTAATA 57.330 29.630 0.00 0.00 0.00 0.98
6244 10361 8.455682 CACACAAGTATTATGTTTCCGGTTAAT 58.544 33.333 0.00 1.95 0.00 1.40
6245 10362 7.660617 TCACACAAGTATTATGTTTCCGGTTAA 59.339 33.333 0.00 0.00 0.00 2.01
6246 10363 7.160049 TCACACAAGTATTATGTTTCCGGTTA 58.840 34.615 0.00 0.00 0.00 2.85
6247 10364 5.998981 TCACACAAGTATTATGTTTCCGGTT 59.001 36.000 0.00 0.00 0.00 4.44
6248 10365 5.553123 TCACACAAGTATTATGTTTCCGGT 58.447 37.500 0.00 0.00 0.00 5.28
6249 10366 6.489127 TTCACACAAGTATTATGTTTCCGG 57.511 37.500 0.00 0.00 0.00 5.14
6250 10367 8.661257 TGTATTCACACAAGTATTATGTTTCCG 58.339 33.333 0.00 0.00 0.00 4.30
6260 10377 9.719355 TGTTTGTCTATGTATTCACACAAGTAT 57.281 29.630 0.00 0.00 37.54 2.12
6261 10378 9.203421 CTGTTTGTCTATGTATTCACACAAGTA 57.797 33.333 0.00 0.00 37.54 2.24
6262 10379 7.931407 TCTGTTTGTCTATGTATTCACACAAGT 59.069 33.333 0.00 0.00 37.54 3.16
6263 10380 8.310406 TCTGTTTGTCTATGTATTCACACAAG 57.690 34.615 0.00 0.00 37.54 3.16
6264 10381 7.931407 ACTCTGTTTGTCTATGTATTCACACAA 59.069 33.333 0.00 0.00 37.54 3.33
6265 10382 7.384932 CACTCTGTTTGTCTATGTATTCACACA 59.615 37.037 0.00 0.00 37.54 3.72
6266 10383 7.385205 ACACTCTGTTTGTCTATGTATTCACAC 59.615 37.037 0.00 0.00 37.54 3.82
6267 10384 7.441836 ACACTCTGTTTGTCTATGTATTCACA 58.558 34.615 0.00 0.00 39.52 3.58
6268 10385 7.598869 TGACACTCTGTTTGTCTATGTATTCAC 59.401 37.037 11.01 0.00 43.30 3.18
6269 10386 7.598869 GTGACACTCTGTTTGTCTATGTATTCA 59.401 37.037 0.00 0.00 43.30 2.57
6270 10387 7.815068 AGTGACACTCTGTTTGTCTATGTATTC 59.185 37.037 1.07 0.00 43.30 1.75
6271 10388 7.671302 AGTGACACTCTGTTTGTCTATGTATT 58.329 34.615 1.07 0.00 43.30 1.89
6272 10389 7.233389 AGTGACACTCTGTTTGTCTATGTAT 57.767 36.000 1.07 0.00 43.30 2.29
6273 10390 6.650427 AGTGACACTCTGTTTGTCTATGTA 57.350 37.500 1.07 0.00 43.30 2.29
6274 10391 5.537300 AGTGACACTCTGTTTGTCTATGT 57.463 39.130 1.07 0.00 43.30 2.29
6275 10392 6.682746 ACTAGTGACACTCTGTTTGTCTATG 58.317 40.000 12.39 0.00 43.30 2.23
6276 10393 6.902771 ACTAGTGACACTCTGTTTGTCTAT 57.097 37.500 12.39 0.00 43.30 1.98
6277 10394 7.575155 GCATACTAGTGACACTCTGTTTGTCTA 60.575 40.741 12.39 0.00 43.30 2.59
6278 10395 6.682746 CATACTAGTGACACTCTGTTTGTCT 58.317 40.000 12.39 0.00 43.30 3.41
6279 10396 5.346281 GCATACTAGTGACACTCTGTTTGTC 59.654 44.000 12.39 9.81 43.22 3.18
6280 10397 5.230942 GCATACTAGTGACACTCTGTTTGT 58.769 41.667 12.39 5.61 0.00 2.83
6281 10398 4.627467 GGCATACTAGTGACACTCTGTTTG 59.373 45.833 12.39 16.63 0.00 2.93
6282 10399 4.528596 AGGCATACTAGTGACACTCTGTTT 59.471 41.667 12.39 5.23 0.00 2.83
6283 10400 4.090090 AGGCATACTAGTGACACTCTGTT 58.910 43.478 12.39 0.00 0.00 3.16
6284 10401 3.697045 GAGGCATACTAGTGACACTCTGT 59.303 47.826 12.39 14.35 0.00 3.41
6285 10402 3.951037 AGAGGCATACTAGTGACACTCTG 59.049 47.826 12.39 9.04 33.23 3.35
6286 10403 4.243793 AGAGGCATACTAGTGACACTCT 57.756 45.455 12.39 10.40 0.00 3.24
6287 10404 5.127491 AGTAGAGGCATACTAGTGACACTC 58.873 45.833 12.39 8.31 34.21 3.51
6288 10405 5.118729 AGTAGAGGCATACTAGTGACACT 57.881 43.478 13.68 13.68 34.21 3.55
6289 10406 5.357314 TCAAGTAGAGGCATACTAGTGACAC 59.643 44.000 5.39 0.00 34.90 3.67
6290 10407 5.357314 GTCAAGTAGAGGCATACTAGTGACA 59.643 44.000 19.41 0.00 40.28 3.58
6291 10408 5.591067 AGTCAAGTAGAGGCATACTAGTGAC 59.409 44.000 17.97 17.97 40.57 3.67
6292 10409 5.756918 AGTCAAGTAGAGGCATACTAGTGA 58.243 41.667 5.39 2.59 34.90 3.41
6293 10410 6.293735 GCTAGTCAAGTAGAGGCATACTAGTG 60.294 46.154 5.39 0.00 38.02 2.74
6294 10411 5.766174 GCTAGTCAAGTAGAGGCATACTAGT 59.234 44.000 0.00 0.00 38.02 2.57
6295 10412 6.001460 AGCTAGTCAAGTAGAGGCATACTAG 58.999 44.000 0.00 0.00 38.50 2.57
6296 10413 5.942961 AGCTAGTCAAGTAGAGGCATACTA 58.057 41.667 3.23 0.00 34.90 1.82
6297 10414 4.798882 AGCTAGTCAAGTAGAGGCATACT 58.201 43.478 0.00 0.00 37.61 2.12
6298 10415 4.319911 CGAGCTAGTCAAGTAGAGGCATAC 60.320 50.000 0.00 0.00 0.00 2.39
6299 10416 3.815962 CGAGCTAGTCAAGTAGAGGCATA 59.184 47.826 0.00 0.00 0.00 3.14
6300 10417 2.621055 CGAGCTAGTCAAGTAGAGGCAT 59.379 50.000 0.00 0.00 0.00 4.40
6301 10418 2.017782 CGAGCTAGTCAAGTAGAGGCA 58.982 52.381 0.00 0.00 0.00 4.75
6302 10419 2.018515 ACGAGCTAGTCAAGTAGAGGC 58.981 52.381 0.00 0.00 0.00 4.70
6303 10420 3.690139 TCAACGAGCTAGTCAAGTAGAGG 59.310 47.826 0.00 0.00 0.00 3.69
6304 10421 4.948608 TCAACGAGCTAGTCAAGTAGAG 57.051 45.455 0.00 0.00 0.00 2.43
6305 10422 4.941873 TGATCAACGAGCTAGTCAAGTAGA 59.058 41.667 0.00 0.00 0.00 2.59
6306 10423 5.236655 TGATCAACGAGCTAGTCAAGTAG 57.763 43.478 0.00 0.00 0.00 2.57
6307 10424 5.638596 TTGATCAACGAGCTAGTCAAGTA 57.361 39.130 3.38 0.00 0.00 2.24
6308 10425 4.521130 TTGATCAACGAGCTAGTCAAGT 57.479 40.909 3.38 0.00 0.00 3.16
6309 10426 5.164233 TCTTTGATCAACGAGCTAGTCAAG 58.836 41.667 7.89 0.00 0.00 3.02
6310 10427 5.134202 TCTTTGATCAACGAGCTAGTCAA 57.866 39.130 7.89 0.00 0.00 3.18
6311 10428 4.783764 TCTTTGATCAACGAGCTAGTCA 57.216 40.909 7.89 0.00 0.00 3.41
6312 10429 4.505922 CCATCTTTGATCAACGAGCTAGTC 59.494 45.833 18.24 0.00 0.00 2.59
6313 10430 4.081420 ACCATCTTTGATCAACGAGCTAGT 60.081 41.667 18.24 10.56 0.00 2.57
6314 10431 4.437239 ACCATCTTTGATCAACGAGCTAG 58.563 43.478 18.24 8.24 0.00 3.42
6315 10432 4.471904 ACCATCTTTGATCAACGAGCTA 57.528 40.909 18.24 0.00 0.00 3.32
6316 10433 3.340814 ACCATCTTTGATCAACGAGCT 57.659 42.857 18.24 2.03 0.00 4.09
6317 10434 5.065218 ACATAACCATCTTTGATCAACGAGC 59.935 40.000 18.24 0.00 0.00 5.03
6318 10435 6.668541 ACATAACCATCTTTGATCAACGAG 57.331 37.500 18.24 10.23 0.00 4.18
6319 10436 7.361713 GGAAACATAACCATCTTTGATCAACGA 60.362 37.037 16.08 16.08 0.00 3.85
6320 10437 6.747280 GGAAACATAACCATCTTTGATCAACG 59.253 38.462 7.89 6.62 0.00 4.10
6321 10438 7.830739 AGGAAACATAACCATCTTTGATCAAC 58.169 34.615 7.89 0.00 0.00 3.18
6322 10439 9.177608 CTAGGAAACATAACCATCTTTGATCAA 57.822 33.333 3.38 3.38 0.00 2.57
6323 10440 7.283127 GCTAGGAAACATAACCATCTTTGATCA 59.717 37.037 0.00 0.00 0.00 2.92
6324 10441 7.255277 GGCTAGGAAACATAACCATCTTTGATC 60.255 40.741 0.00 0.00 0.00 2.92
6325 10442 6.547510 GGCTAGGAAACATAACCATCTTTGAT 59.452 38.462 0.00 0.00 0.00 2.57
6326 10443 5.885912 GGCTAGGAAACATAACCATCTTTGA 59.114 40.000 0.00 0.00 0.00 2.69
6327 10444 5.652014 TGGCTAGGAAACATAACCATCTTTG 59.348 40.000 0.00 0.00 0.00 2.77
6328 10445 5.826643 TGGCTAGGAAACATAACCATCTTT 58.173 37.500 0.00 0.00 0.00 2.52
6329 10446 5.450818 TGGCTAGGAAACATAACCATCTT 57.549 39.130 0.00 0.00 0.00 2.40
6330 10447 5.653255 ATGGCTAGGAAACATAACCATCT 57.347 39.130 0.00 0.00 30.76 2.90
6331 10448 5.827797 TCAATGGCTAGGAAACATAACCATC 59.172 40.000 0.00 0.00 35.43 3.51
6332 10449 5.594317 GTCAATGGCTAGGAAACATAACCAT 59.406 40.000 0.00 0.00 38.03 3.55
6333 10450 4.947388 GTCAATGGCTAGGAAACATAACCA 59.053 41.667 0.00 0.00 0.00 3.67
6334 10451 4.947388 TGTCAATGGCTAGGAAACATAACC 59.053 41.667 0.00 0.00 0.00 2.85
6335 10452 6.318648 TCATGTCAATGGCTAGGAAACATAAC 59.681 38.462 0.00 0.00 34.30 1.89
6336 10453 6.422333 TCATGTCAATGGCTAGGAAACATAA 58.578 36.000 0.00 0.00 34.30 1.90
6337 10454 6.000246 TCATGTCAATGGCTAGGAAACATA 58.000 37.500 0.00 0.00 34.30 2.29
6338 10455 4.858850 TCATGTCAATGGCTAGGAAACAT 58.141 39.130 0.00 0.00 34.30 2.71
6339 10456 4.263462 ACTCATGTCAATGGCTAGGAAACA 60.263 41.667 0.00 0.00 34.30 2.83
6340 10457 4.265073 ACTCATGTCAATGGCTAGGAAAC 58.735 43.478 0.00 0.00 34.30 2.78
6341 10458 4.574674 ACTCATGTCAATGGCTAGGAAA 57.425 40.909 0.00 0.00 34.30 3.13
6342 10459 4.263462 ACAACTCATGTCAATGGCTAGGAA 60.263 41.667 0.00 0.00 37.96 3.36
6343 10460 3.264193 ACAACTCATGTCAATGGCTAGGA 59.736 43.478 0.00 0.00 37.96 2.94
6344 10461 3.614092 ACAACTCATGTCAATGGCTAGG 58.386 45.455 0.00 0.00 37.96 3.02
6356 10473 6.029607 CCCGTTAATCAAATGACAACTCATG 58.970 40.000 7.65 0.00 37.20 3.07
6357 10474 5.943416 TCCCGTTAATCAAATGACAACTCAT 59.057 36.000 7.65 0.00 38.94 2.90
6358 10475 5.309638 TCCCGTTAATCAAATGACAACTCA 58.690 37.500 7.65 0.00 0.00 3.41
6359 10476 5.873179 TCCCGTTAATCAAATGACAACTC 57.127 39.130 7.65 0.00 0.00 3.01
6360 10477 5.943416 TGATCCCGTTAATCAAATGACAACT 59.057 36.000 0.00 0.00 30.37 3.16
6361 10478 6.027749 GTGATCCCGTTAATCAAATGACAAC 58.972 40.000 0.00 0.00 35.04 3.32
6362 10479 5.707764 TGTGATCCCGTTAATCAAATGACAA 59.292 36.000 0.00 0.00 35.04 3.18
6363 10480 5.249420 TGTGATCCCGTTAATCAAATGACA 58.751 37.500 0.00 0.00 35.04 3.58
6364 10481 5.811399 TGTGATCCCGTTAATCAAATGAC 57.189 39.130 0.00 0.00 35.04 3.06
6365 10482 6.118852 TGATGTGATCCCGTTAATCAAATGA 58.881 36.000 0.00 0.00 32.39 2.57
6366 10483 6.375945 TGATGTGATCCCGTTAATCAAATG 57.624 37.500 0.00 0.00 32.39 2.32
6367 10484 7.587037 AATGATGTGATCCCGTTAATCAAAT 57.413 32.000 0.00 0.00 34.46 2.32
6368 10485 7.228507 CCTAATGATGTGATCCCGTTAATCAAA 59.771 37.037 0.00 0.00 35.04 2.69
6369 10486 6.710295 CCTAATGATGTGATCCCGTTAATCAA 59.290 38.462 0.00 0.00 35.04 2.57
6370 10487 6.042666 TCCTAATGATGTGATCCCGTTAATCA 59.957 38.462 0.00 0.00 0.00 2.57
6371 10488 6.464222 TCCTAATGATGTGATCCCGTTAATC 58.536 40.000 0.00 0.00 0.00 1.75
6372 10489 6.270000 TCTCCTAATGATGTGATCCCGTTAAT 59.730 38.462 0.00 0.00 0.00 1.40
6373 10490 5.600898 TCTCCTAATGATGTGATCCCGTTAA 59.399 40.000 0.00 0.00 0.00 2.01
6374 10491 5.144832 TCTCCTAATGATGTGATCCCGTTA 58.855 41.667 0.00 0.00 0.00 3.18
6375 10492 3.967326 TCTCCTAATGATGTGATCCCGTT 59.033 43.478 0.00 0.00 0.00 4.44
6376 10493 3.576861 TCTCCTAATGATGTGATCCCGT 58.423 45.455 0.00 0.00 0.00 5.28
6377 10494 4.607293 TTCTCCTAATGATGTGATCCCG 57.393 45.455 0.00 0.00 0.00 5.14
6378 10495 6.119240 TCATTCTCCTAATGATGTGATCCC 57.881 41.667 0.00 0.00 32.21 3.85
6386 10503 8.438373 AGTCAATCACATCATTCTCCTAATGAT 58.562 33.333 7.28 7.28 45.40 2.45
6387 10504 7.799081 AGTCAATCACATCATTCTCCTAATGA 58.201 34.615 3.13 3.13 40.50 2.57
6388 10505 8.343366 CAAGTCAATCACATCATTCTCCTAATG 58.657 37.037 0.00 0.00 0.00 1.90
6389 10506 8.270030 TCAAGTCAATCACATCATTCTCCTAAT 58.730 33.333 0.00 0.00 0.00 1.73
6390 10507 7.550551 GTCAAGTCAATCACATCATTCTCCTAA 59.449 37.037 0.00 0.00 0.00 2.69
6391 10508 7.044181 GTCAAGTCAATCACATCATTCTCCTA 58.956 38.462 0.00 0.00 0.00 2.94
6392 10509 5.879223 GTCAAGTCAATCACATCATTCTCCT 59.121 40.000 0.00 0.00 0.00 3.69
6393 10510 5.065731 GGTCAAGTCAATCACATCATTCTCC 59.934 44.000 0.00 0.00 0.00 3.71
6394 10511 5.065731 GGGTCAAGTCAATCACATCATTCTC 59.934 44.000 0.00 0.00 0.00 2.87
6395 10512 4.946157 GGGTCAAGTCAATCACATCATTCT 59.054 41.667 0.00 0.00 0.00 2.40
6396 10513 4.701651 TGGGTCAAGTCAATCACATCATTC 59.298 41.667 0.00 0.00 0.00 2.67
6397 10514 4.665451 TGGGTCAAGTCAATCACATCATT 58.335 39.130 0.00 0.00 0.00 2.57
6398 10515 4.305539 TGGGTCAAGTCAATCACATCAT 57.694 40.909 0.00 0.00 0.00 2.45
6399 10516 3.786368 TGGGTCAAGTCAATCACATCA 57.214 42.857 0.00 0.00 0.00 3.07
6400 10517 4.096984 GGAATGGGTCAAGTCAATCACATC 59.903 45.833 0.00 0.00 0.00 3.06
6401 10518 4.019174 GGAATGGGTCAAGTCAATCACAT 58.981 43.478 0.00 0.00 0.00 3.21
6402 10519 3.181435 TGGAATGGGTCAAGTCAATCACA 60.181 43.478 0.00 0.00 0.00 3.58
6403 10520 3.420893 TGGAATGGGTCAAGTCAATCAC 58.579 45.455 0.00 0.00 0.00 3.06
6404 10521 3.805066 TGGAATGGGTCAAGTCAATCA 57.195 42.857 0.00 0.00 0.00 2.57
6405 10522 5.221126 GCTAATGGAATGGGTCAAGTCAATC 60.221 44.000 0.00 0.00 0.00 2.67
6406 10523 4.646492 GCTAATGGAATGGGTCAAGTCAAT 59.354 41.667 0.00 0.00 0.00 2.57
6407 10524 4.016444 GCTAATGGAATGGGTCAAGTCAA 58.984 43.478 0.00 0.00 0.00 3.18
6408 10525 3.266772 AGCTAATGGAATGGGTCAAGTCA 59.733 43.478 0.00 0.00 0.00 3.41
6409 10526 3.891049 AGCTAATGGAATGGGTCAAGTC 58.109 45.455 0.00 0.00 0.00 3.01
6410 10527 4.322057 AAGCTAATGGAATGGGTCAAGT 57.678 40.909 0.00 0.00 0.00 3.16
6411 10528 4.276926 GCTAAGCTAATGGAATGGGTCAAG 59.723 45.833 0.00 0.00 0.00 3.02
6412 10529 4.207165 GCTAAGCTAATGGAATGGGTCAA 58.793 43.478 0.00 0.00 0.00 3.18
6413 10530 3.201930 TGCTAAGCTAATGGAATGGGTCA 59.798 43.478 0.00 0.00 0.00 4.02
6414 10531 3.565902 GTGCTAAGCTAATGGAATGGGTC 59.434 47.826 0.00 0.00 0.00 4.46
6415 10532 3.203040 AGTGCTAAGCTAATGGAATGGGT 59.797 43.478 0.00 0.00 0.00 4.51
6416 10533 3.817647 GAGTGCTAAGCTAATGGAATGGG 59.182 47.826 0.00 0.00 0.00 4.00
6417 10534 3.496130 CGAGTGCTAAGCTAATGGAATGG 59.504 47.826 0.00 0.00 0.00 3.16
6418 10535 4.371786 TCGAGTGCTAAGCTAATGGAATG 58.628 43.478 0.00 0.00 0.00 2.67
6419 10536 4.672587 TCGAGTGCTAAGCTAATGGAAT 57.327 40.909 0.00 0.00 0.00 3.01
6420 10537 4.621991 GATCGAGTGCTAAGCTAATGGAA 58.378 43.478 0.00 0.00 0.00 3.53
6421 10538 3.304726 CGATCGAGTGCTAAGCTAATGGA 60.305 47.826 10.26 0.00 0.00 3.41
6422 10539 2.983136 CGATCGAGTGCTAAGCTAATGG 59.017 50.000 10.26 0.00 0.00 3.16
6423 10540 3.633235 ACGATCGAGTGCTAAGCTAATG 58.367 45.455 24.34 0.00 0.00 1.90
6424 10541 3.992260 ACGATCGAGTGCTAAGCTAAT 57.008 42.857 24.34 0.00 0.00 1.73
6425 10542 3.777465 AACGATCGAGTGCTAAGCTAA 57.223 42.857 24.34 0.00 0.00 3.09
6426 10543 3.777465 AAACGATCGAGTGCTAAGCTA 57.223 42.857 24.34 0.00 0.00 3.32
6427 10544 2.656560 AAACGATCGAGTGCTAAGCT 57.343 45.000 24.34 0.00 0.00 3.74
6428 10545 3.436496 ACTAAACGATCGAGTGCTAAGC 58.564 45.455 24.34 0.00 0.00 3.09
6429 10546 7.310361 GAATACTAAACGATCGAGTGCTAAG 57.690 40.000 24.34 10.81 0.00 2.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.